BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042039
(376 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 292 bits (748), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 225/364 (61%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ + V Y+T+ID LCK VD A LF +M + I PDV TY+SLI LC+ W++A R
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P+VVTFN ++D K GK+ EA +L D M+QR + PN TY++L++GFC
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+++F M S C D V+YN LING+CK K+V + + L+R+M +G+ V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL G F+ ++A +F++M D V + TYNT +DGLCKNG + +A+ +F L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K E DI YN + +G+CK+G++E +LF SL + + DV+ YN MI G C G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++A+ LF+ M+E+ P+ + TLI +R + EL+ +M+ + DAS +V
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 373 VDLL 376
D+L
Sbjct: 597 TDML 600
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 206/362 (56%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ VTY +I+GLCK G D A L +M+ I DVV Y+++I LC ++A
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM ++G++P V T++ ++ LC G+ +ASRLL M++R + PN T+++L+D F
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
GK+ AE+LF M + V+YN LING+C + ++EA ++ MVSK P V
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
VTYNTL G + +V ++LF +M R + +T TY T I G + A +F+
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ +I YN L+DGLCK+G+LE A+ +F L + + D+ TYNIM G+C G+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
++ DLF + V P+VI + T+I GF + + L KMKE +PD+ +
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 372 VV 373
++
Sbjct: 561 LI 562
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 191/352 (54%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ VT N++++G C + +A AL QM PD VT+ +L+HGL N +EA L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M+ +G QP +VT+ +++ LCK G+ D A LL+ M + + + YST++D C
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
++ A LF M++ G + D +Y+ LI+ C +A L +M+ + I P VVT
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+N+L + ++ A KLF+EM + + + TYN+ I+G C + + EA ++F +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C D+ YN LI+G CK+ ++ +ELFR + RR LV + VTY +IHG D
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
A +F M + V PN++ + TL+ G + K K + + +++ K+ PD
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 193/362 (53%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N TYN +I+ LC+ + A A+ +M P +VT NSL++G CH N +EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M++ G QP VTF ++ L ++ K EA L++ MV + +P+ TY +++G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G+ + A L ME + D V Y+ +I+ CK + V++AL+L+ EM +KGI+P V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
++L L + A +L +M + + T+N+ ID K G ++EA +LF +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
+ +I YN LI+G C RL+ A ++F + + + DVVTYN +I+G C ++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+LF DM + N + + TLIHGF + + + +M V P+ + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 375 LL 376
L
Sbjct: 459 GL 460
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 179/347 (51%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V ++ ++ + K D + +M+ ++ ++ TYN +I+ LC + + A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G PS+VT N +++ C ++ EA L+D MV+ +P+ T++TL+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K + A L M GC+ D V+Y +ING CK E + AL+L +M I+ VV
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y+T+ L + V+ AL LF EM + D TY++ I LC G +A L +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
K ++ +N LID K G+L A +LF + +R + ++VTYN +I+G C ++D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
+A +F M P+V+ + TLI+GF + K +EL M +
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 177/334 (52%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D+A LF +M P +V ++ L+ + ++ +M GV ++ T+N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ LC+ ++ A +L M++ P+ T ++L++GFC +I+ A L M MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ D V++ L++G ++ + EA++L MV KG +P +VTY + GL + + + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L +M++ + AD Y+T ID LCK ++ +A+ LF + D+ Y+ LI L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L + R + +VVT+N +I +G++ +A LF +M + ++ PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ + +LI+GF ++ + ++ M K +PD
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 140/265 (52%), Gaps = 1/265 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN VTYN++I+G C +D+A+ +F M ++ PDVVTYN+LI+G C A + L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F +M +G+ + VT+ ++ + D A + MV V PN TY+TL+DG C
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
GK+ +A +F ++ + D +YNI+ G CK +VE+ L+ + KG+KP V+
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNT+ G + E A LF +M+ D D+ TYNT I ++G + EL + +
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLE 278
+ D Y + D L GRL+
Sbjct: 583 SCRFAGDASTYGLVTDML-HDGRLD 606
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 127/225 (56%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ VTYNT+I+G CK V LF M + + VTY +LIHG A+D + A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+F +M+ GV P+++T+N ++D LCKNGK+++A + + + + + P+ +TY+ + +G
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK+ +LF S+ G K D ++YN +I+G+CK EEA +L+ +M G P
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
TYNTL + +L +EM+ A D STY D L
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 152/299 (50%), Gaps = 4/299 (1%)
Query: 80 QGVQPSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
+G+ S ++++ ++L +N K+DEA L MV+ P+ +S L+
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
K + ME +G H+ +YNI+IN C+ ++ AL++ +M+ G P++VT N
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
+L G +++ A+ L ++M DT T+ T + GL ++ EAV L + +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
C+ D+ Y +I+GLCK G ++AL L + + + ADVV Y+ +I LC +D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+LF +M+ + P+V + +LI + S LL M E+K+ P+ + ++D
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 224/364 (61%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P + YNTIIDGLCK +D A LF +M+ + I P+VVTY+SLI LC+ W++A R
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P V TF+ ++D K GK+ EA +L D MV+R + P+ TYS+L++GFC
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+++F M S C D V+YN LI G+CK K VEE + ++REM +G+ V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYN L GLF+ + A ++F+EM D V + TYNT +DGLCKNG + +A+ +F L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K E I YN +I+G+CK+G++E +LF +L + + DVV YN MI G C G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++A LF +M+E+ PN + TLI +R EL+ +M+ DAS + +V
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Query: 373 VDLL 376
++L
Sbjct: 613 TNML 616
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 194/352 (55%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN VT +++++G C + +A AL QM P+ VT+N+LIHGL N +EA
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M+ +G QP +VT+ V+++ LCK G D A LL+ M Q + P Y+T++DG C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
++ A LF ME+ G + + V+Y+ LI+ C +A L +M+ + I P V
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T++ L + ++ A KL++EM + + TY++ I+G C + + EA ++F +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C D+ YN LI G CK R+E +E+FR + +R LV + VTYNI+I GL G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
D A ++F +M + V PN++ + TL+ G + K K + + ++ K+ P
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 159/307 (51%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A LF EM+ PS++ F+ ++ + K K D L + M + N +TYS L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC ++ A + G M +G + + V+ + L+NGYC +K + EA++L +M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+P VT+NTL GLF ++ A+ L + M D TY ++GLCK G A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + K E + YN +IDGLCK ++ AL LF+ + + + +VVTY+ +I LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
N G+ A L DM E + P+V F LI FV+ K + +L +M ++ + P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 368 IVSMVVD 374
S +++
Sbjct: 363 TYSSLIN 369
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 126/217 (58%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ VTYNT+I G CK V++ +F +M + + VTYN LI GL A D + A+
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+F EM+ GV P+++T+N ++D LCKNGK+++A + + + + + P +TY+ +++G
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK+ +LF ++ G K D V+YN +I+G+C+ EEA +L++EM G P
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
YNTL E + +L +EM+ A D ST
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 175/334 (52%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A ALF +M P ++ ++ L+ + N ++ L +M + G+ + T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A +L M++ PN T S+L++G+C + +I+ A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ + V++N LI+G + + EA++L MV+KG +P +VTY + GL + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L +M++ + YNT IDGLCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L + R + DV T++ +I +G++ +A L+ +M + ++ P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ + +LI+GF ++ + ++ M K PD
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 4/285 (1%)
Query: 94 DELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
++L +NG K+D+A L MV+ P+ +S L+ K + L M++
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
+G H+ +Y+ILIN +C+ ++ AL++ +M+ G +P +VT ++L G ++
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
A+ L ++M +T T+NT I GL + EA+ L + C+ D+ Y +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
GLCK G ++A L + + L V+ YN +I GLC MD A +LF +ME + P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
NV+ + +LI + S LL M E+K+ PD S ++D
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 225/364 (61%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ + V Y TIID LC V+ A LF +M + I P+VVTYNSLI LC+ W++A R
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P+VVTF+ ++D K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+ +F M S C + V+YN LI G+CK K VEE + L+REM +G+ V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL GLF+ + A K+F++M D V D TY+ +DGLCK G + +A+ +F L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K E DI YN +I+G+CK+G++E +LF SL + + +V+ Y MI G C G
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++A LF +M+E+ PN + TLI +R + EL+ +M+ + DAS +SMV
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 373 VDLL 376
+++L
Sbjct: 612 INML 615
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 195/362 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT +++++G C + +A AL QM P+ VT+N+LIHGL N +EA
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M+ +G QP + T+ +++ LCK G +D A LL M + + + Y+T++D C
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+N A LF M++ G + + V+YN LI C +A L +M+ + I P VV
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T++ L + ++ A KL++EM + + D TY++ I+G C + + EA +F +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C ++ YN LI G CK+ R+E +ELFR + +R LV + VTYN +I GL G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D A +F M + V P++I + L+ G + K K + + +++ K+ PD +++
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 373 VD 374
++
Sbjct: 507 IE 508
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 159/307 (51%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A LF EM+ PS+V FN ++ + K K D L + M + + ++Y+ L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC ++ A + G M +G + D V+ + L+NGYC K + EA++L +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+P VT+NTL GLF ++ A+ L + M D TY T ++GLCK G I A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + + K E D+ Y +ID LC + AL LF + + + +VVTYN +I LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
N G+ A L DM E + PNV+ F LI FV+ K + +L +M ++ + PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 368 IVSMVVD 374
S +++
Sbjct: 362 TYSSLIN 368
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 132/235 (56%), Gaps = 4/235 (1%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN VTYNT+I G CK V++ LF +M + + VTYN+LI GL A D + A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
++F +M+ GV P ++T+++++D LCK GK+++A + + + + + P+ +TY+ +++G
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK+ +LF S+ G K + + Y +I+G+C+ EEA +L+REM G P
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI----DGLCKNGYI 242
TYNTL + +L +EM+ D ST + I DG + Y+
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 170/334 (50%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A LF +M P +V +N L+ + N ++ L M + + + ++N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A +L M++ P+ T S+L++G+C +I+ A L M M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ + V++N LI+G + + EA++L MV++G +P + TY T+ GL + ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L ++M++ + AD Y T ID LC + +A+ LF + ++ YN LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L + R + +VVT++ +I +G++ +A L+ +M + ++ P++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ +LI+GF ++ + + M K P+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K+D+A L MVQ P+ ++ L+ K + L M+++ +D SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
ILIN +C+ ++ AL++ +M+ G +P +VT ++L G ++ A+ L ++M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
+ +T T+NT I GL + EAV L + C+ D+ Y +++GLCK G +++A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
L L + + + + ADVV Y +I LCN ++ A +LF +M+ + PNV+ + +LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ S LL M E+K+ P+ S ++D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 223/364 (61%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P V YNTIID LC V+ A LF +M + I P+VVTYNSLI LC+ W++A R
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P+VVTF+ ++D K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+ +F M S C + V+YN LI G+CK K V+E + L+REM +G+ V
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL G F+ + ++A +F++M D V D TY+ +DGLC NG + A+ +F L
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K E DI YN +I+G+CK+G++E +LF SL + + +VVTY M+ G C G
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++A LF +M+E P+ + TLI +R + EL+ +M+ + + DAS + +V
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
Query: 373 VDLL 376
++L
Sbjct: 613 TNML 616
Score = 211 bits (538), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 192/362 (53%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N TY+ +I+ C+ + A A+ +M PD+VT NSL++G CH N ++A L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M++ G QP TFN ++ L ++ + EA L+D MV + +P+ TY +++G C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G I+ A L ME + V YN +I+ C K V +AL+L+ EM +KGI+P VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
N+L L + A +L +M + + T++ ID K G +VEA +L+ +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
+ DI Y+ LI+G C RL+ A +F + + +VVTYN +I G C ++D+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+LF +M + + N + + TLIHGF + + + +M V+PD S+++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 375 LL 376
L
Sbjct: 475 GL 476
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 203/434 (46%), Gaps = 76/434 (17%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT N++++G C + A +L QM PD T+N+LIHGL N +EA
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M+ +G QP +VT+ ++++ LCK G +D A LL M Q + P Y+T++D C
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYN-------------------------------- 160
+N A LF M++ G + + V+YN
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 161 ---ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
LI+ + K ++ EA LY EM+ + I P + TY++L G +++ A +FE M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL------------------------- 252
D + TYNT I G CK + E +ELFR +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 253 -------------GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
G+L DI Y+ L+DGLC +G++E AL +F L R + D+ TY
Sbjct: 448 DNAQIVFKQMVSDGVLP---DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
NIMI G+C G+++ DLF + V PNV+ + T++ GF R + L +MKE
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 360 KKVMPDASIVSMVV 373
+ +PD+ + ++
Sbjct: 565 EGPLPDSGTYNTLI 578
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 158/307 (51%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A LF +M+ PS+V F+ ++ + K K D L + M + N +TYS L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC +++ A + M +G + D V+ N L+NG+C + +A+SL +MV G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+P T+NTL GLF ++ A+ L + M D TY ++GLCK G I A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + + K E + YN +ID LC + AL LF + + + +VVTYN +I LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
N G+ A L DM E + PNV+ F LI FV+ K + +L +M ++ + PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 368 IVSMVVD 374
S +++
Sbjct: 363 TYSSLIN 369
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 171/334 (51%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A LF M P +V ++ L+ + N ++ L +M + G+ ++ T+++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A +L M++ P+ T ++L++GFC +I+ A L G M MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ D ++N LI+G ++ EA++L MV KG +P +VTY + GL + ++ AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L ++M++ + YNT ID LC + +A+ LF + ++ YN LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L + R + +VVT++ +I +G++ +A L+ +M + ++ P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ +LI+GF ++ + + M K P+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 123/217 (56%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN VTYNT+I G CK VD+ LF +M + + VTY +LIHG A + + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+F +M+ GV P ++T+++++D LC NGK++ A + + + + + P+ +TY+ +++G
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK+ +LF S+ G K + V+Y +++G+C+ EEA +L+REM +G P
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
TYNTL + +L EM+ D ST
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 144/274 (52%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K+D+A L MV+ P+ +S L+ K + L M+++G H+ +Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
ILIN +C+ ++ AL++ +M+ G +P +VT N+L G +++ A+ L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
D+ T+NT I GL ++ EAV L + + C+ D+ Y +++GLCK G +++A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
L L + + + + VV YN +I LCN ++ A +LF +M+ + PNV+ + +LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ S LL M E+K+ P+ S ++D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
ND ++D A +LF DM ++ P+++ F L+ ++NK VI L +M+ + +
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 368 IVSMVVD 374
S++++
Sbjct: 118 TYSILIN 124
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 229/364 (62%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ + V +NTIID LCK VD A LF +M+ + I P+VVTY+SLI LC W++A +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P++VTFN ++D K GK EA +L D M++R + P+ FTY++L++GFC
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ ++++A+++F M S C D V+YN LI G+CK+K VE+ L+REM +G+ V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL GLF ++A K+F++M D V D TY+ +DGLC NG + +A+E+F +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ +LDI Y +I+G+CK+G+++ +LF SL + + +VVTYN MI GLC+ +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A+ L M+E+ PN + TLI +R + EL+ +M+ + + DAS + +V
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 373 VDLL 376
++L
Sbjct: 617 ANML 620
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 200/392 (51%), Gaps = 35/392 (8%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
TYN +I+ C+ + A AL +M P +VT +SL++G CH ++A L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 78 MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
++ G +P +TF ++ L + K EA L+D MVQR +PN TY +++G C G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
+ A L ME+ + D V +N +I+ CK + V++AL+L++EM +KGI+P VVTY++L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 198 -------------------------------FLGLFEIHQVE----HALKLFEEMQRDDV 222
F L + E A KL+++M + +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALE 282
D TYN+ ++G C + + +A ++F + C D+ YN LI G CKS R+E E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 283 LFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFV 342
LFR + R LV D VTY +I GL +DG D A +F M + V P+++ + L+ G
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 343 RINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
K K +E+ M++ ++ D I + +++
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 196/396 (49%), Gaps = 35/396 (8%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+T+T+ T+I GL +A AL +M P++VTY +++GLC D + A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M ++ VV FN I+D LCK +D+A L M + +RPN TYS+L+ C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G+ + A +L M + V++N LI+ + K + EA LY +M+ + I P +
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYN+L G +++ A ++FE M D D TYNT I G CK+ + + ELFR +
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 253 ---GIL-----------------KCE---------------LDIQAYNCLIDGLCKSGRL 277
G++ C+ DI Y+ L+DGLC +G+L
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
E ALE+F + + + D+ Y MI G+C G++D DLF + V PNV+ + T+
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
I G + LL KMKE +P++ + ++
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 161/312 (51%)
Query: 54 YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
Y ++ H ++A LF M+ PS+V FN ++ + K K D L + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
+ ++ +TY+ L++ FC +I+ A L G M +G + V+ + L+NGYC K +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
+A++L +MV G +P +T+ TL GLF ++ A+ L + M + + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
+GLCK G A+ L + K E D+ +N +ID LCK ++ AL LF+ + + +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
+VVTY+ +I LC+ G+ A L DM E + PN++ F LI FV+ K + +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 354 LHKMKEKKVMPD 365
M ++ + PD
Sbjct: 353 YDDMIKRSIDPD 364
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 125/217 (57%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ VTYNT+I G CK V+ LF +M + D VTY +LI GL H D + A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
++F +M+ GV P ++T+++++D LC NGK+++A + D M + +++ + + Y+T+++G
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK++ +LF S+ G K + V+YN +I+G C + ++EA +L ++M G P
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
TYNTL + +L EM+ D ST
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 169/334 (50%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A LF M P +V +N L+ + ++ L +M + + T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A LL M++ P+ T S+L++G+C +I+ A L M MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ D +++ LI+G + + EA++L MV +G +P +VTY + GL + + AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L +M+ + AD +NT ID LCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A +L + + + ++VT+N +I +G+ +A L+ DM + ++ P++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ +L++GF ++ K ++ M K PD
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 95 ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
E+ +NG K+D+A L MV+ P+ ++ L+ K + L M+ +
Sbjct: 55 EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
H +YNILIN +C+ ++ AL+L +M+ G +P++VT ++L G ++ A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
+ L ++M DT T+ T I GL + EAV L + C+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ------------ 222
Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
++VTY ++++GLC G D A +L ME + +
Sbjct: 223 -----------------------PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
V+IF T+I + + L +M+ K + P+ S ++ L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 280 bits (717), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 219/364 (60%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ + V YNTIIDGLCK +D A LF +M + I PDV TY+SLI LC+ W++A R
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P+VVTF+ ++D K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+ +F M S C + V+Y+ LI G+CK K VEE + L+REM +G+ V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL G F+ ++A +F++M V + TYN +DGLCKNG + +A+ +F L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
E DI YN +I+G+CK+G++E ELF +L + + +V+ YN MI G C G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++A L M+E+ PN + TLI +R EL+ +M+ DAS + +V
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 373 VDLL 376
++L
Sbjct: 615 TNML 618
Score = 265 bits (676), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 213/362 (58%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ VTY T+++GLCK G +D A +L +M+ I DVV YN++I GLC ++A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM ++G++P V T++ ++ LC G+ +ASRLL M++R + PN T+S L+D F
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
GK+ AE+L+ M D +Y+ LING+C + ++EA ++ M+SK P V
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
VTY+TL G + +VE ++LF EM + + +T TY T I G + A +F+
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ + +I YN L+DGLCK+G+L A+ +F L R + D+ TYNIMI G+C G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
++ +LF ++ V+PNVI + T+I GF R + LL KMKE +P++ +
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 372 VV 373
++
Sbjct: 579 LI 580
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 191/359 (53%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
TY+ I+ C+ + A A+ +M PD+VT +SL++G CH+ ++A L +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 78 MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
++ G +P TF ++ L + K EA L+D MVQR +P+ TY T+++G C G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
+ A L ME + D V YN +I+G CK K +++AL+L+ EM +KGI+P V TY++L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
L + A +L +M + + T++ ID K G +VEA +L+ +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
+ DI Y+ LI+G C RL+ A +F + + +VVTY+ +I G C ++++ +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
LF +M + + N + + TLIHGF + + +M V P+ ++++D L
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Score = 187 bits (476), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 185/347 (53%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V +N ++ + K + +L QM+ I+ D+ TY+ I+ C + + A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G +P +VT + +++ C + ++ +A L+D MV+ +P+ FT++TL+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K + A L M GC+ D V+Y ++NG CK +++ ALSL ++M I+ VV
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNT+ GL + ++ AL LF EM + D TY++ I LC G +A L +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
K ++ ++ LID K G+L A +L+ + +R + D+ TY+ +I+G C ++D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
+A +F M PNV+ + TLI GF + + + +EL +M ++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 164/307 (53%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A LF +M+ PS+V FN ++ + K K + L + M + + +TYS
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC +++ A + M +G + D V+ + L+NGYC +K + +A++L +MV G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
KP T+ TL GLF ++ A+ L ++M + D TY T ++GLCK G I A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + + K E D+ YN +IDGLCK ++ AL LF + + + DV TY+ +I LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
N G+ A L DM E + PNV+ F LI FV+ K + +L +M ++ + PD
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 368 IVSMVVD 374
S +++
Sbjct: 365 TYSSLIN 371
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 176/342 (51%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
VD A LF M P +V +N L+ + N + L +M G+ + T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
++ C+ ++ A +L M++ P+ T S+L++G+C + +I+ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
K D ++ LI+G + + EA++L +MV +G +P +VTY T+ GL + ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L ++M++ + AD YNT IDGLCK ++ +A+ LF + D+ Y+ LI L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L + R + +VVT++ +I +G++ +A L+ +M + ++ P++
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+ +LI+GF ++ + + M K P+ S ++
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 126/217 (58%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN VTY+T+I G CK V++ LF +M + + VTY +LIHG A D + A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+F +M+ GV P+++T+N+++D LCKNGK+ +A + + + + + P+ +TY+ +++G
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK+ ELF ++ G + ++YN +I+G+C+ EEA SL ++M G P
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
TYNTL E + +L +EM+ A D ST
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 23/328 (7%)
Query: 70 AKRLFFEMMDQGV--QPSVVTF---------------------NVIMDELCKNGKMDEAS 106
AKRLF QG+ P+V +F ++ + L K+D+A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
L MV+ P+ ++ L+ K L M+++G HD +Y+I IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
C+ ++ AL++ +M+ G +P +VT ++L G ++ A+ L ++M DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
T+ T I GL + EAV L + C+ D+ Y +++GLCK G +++AL L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
+ + + ADVV YN +I GLC MD A +LF +M+ + P+V + +LI +
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
S LL M E+K+ P+ S ++D
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALID 336
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+ V PN +TYN ++DGLCK G + KA +F ++ + PD+ TYN +I G+C A
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
+ LF + +GV P+V+ +N ++ C+ G +EA LL M + PN+ TY+TL
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
+ G + EL M S G D + ++ N
Sbjct: 580 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN + YNT+I G C++G ++A +L +MK + P+ TYN+LI D + L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
EM G T ++ + L +G++D++ LD++
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNML-HDGRLDKS--FLDML 631
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 218/364 (59%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K + V Y+ IIDGLCK+G +D A LF +M+ + D++TYN+LI G C+A W++ +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+ + + P+VVTF+V++D K GK+ EA +LL M+QR + PN TY++L+DGFC
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
++ A ++ M S GC D +++NILINGYCK +++ L L+REM +G+ V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G + ++E A KLF+EM V D +Y +DGLC NG + +A+E+F +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K ELDI Y +I G+C + +++ A +LF SLP + + D YNIMI LC +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
KA LF M E AP+ + + LI + + + EL+ +MK D S V MV
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 373 VDLL 376
+++L
Sbjct: 620 INML 623
Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 198/353 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN VTY +++ +CK G A L +M+ NI D V Y+ +I GLC + A
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF EM +G + ++T+N ++ C G+ D+ ++LL M++R + PN T+S L+D F
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK+ A++L M G + ++YN LI+G+CK +EEA+ + M+SKG P ++
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N L G + ++++ L+LF EM V A+T TYNT + G C++G + A +LF+ +
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ DI +Y L+DGLC +G LE ALE+F + + + D+ Y I+IHG+CN ++
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
D A DLF + V + + +I R + SK L KM E+ PD
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 209/361 (57%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+TV +NT+++GLC E V +A L +M P ++T N+L++GLC ++A
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M++ G QP+ VT+ +++ +CK+G+ A LL M +R+++ +A YS ++DG C
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G ++ A LF ME G K D ++YN LI G+C ++ L R+M+ + I P VV
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T++ L + ++ A +L +EM + +A +T TYN+ IDG CK + EA+++ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C+ DI +N LI+G CK+ R++ LELFR + R ++A+ VTYN ++ G C G++
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+ A LF +M V P+++ + L+ G + K +E+ K+++ K+ D I ++
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 373 V 373
+
Sbjct: 515 I 515
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 177/343 (51%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
D A LF M P V+ +N L + + L +M +G+ S+ T ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ K+ A + +++ P+ ++TL++G CL +++ A EL M MG
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
K ++ N L+NG C N +V +A+ L MV G +P VTY + + + Q A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
+L +M+ ++ D Y+ IDGLCK+G + A LF + I + DI YN LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C +GR + +L R + +R + +VVT++++I +G++ +A L +M + +APN
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
I + +LI GF + N+ + I+++ M K PD +++++
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 121/225 (53%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ +T+N +I+G CK +D LF +M + + VTYN+L+ G C + AK
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+LF EM+ + V+P +V++ +++D LC NG++++A + + + + + Y ++ G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C K++ A +LF S+ G K D +YNI+I+ C+ + +A L+R+M +G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
+TYN L A +L EEM+ AD ST I+ L
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 138/274 (50%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K D+A L M+Q P ++ L T + L MES G H + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
I+IN +C+ +++ A S +++ G +P V +NTL GL +V AL+L + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
T NT ++GLC NG + +AV L + + + Y +++ +CKSG+ +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
+EL R + R + D V Y+I+I GLC DG +D A +LF +ME ++I + TLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
F + +LL M ++K+ P+ S+++D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD--VSYNILIN 164
R L R V+P TL IN EL E D +SY ++
Sbjct: 7 RRLSSQASRFVQPRLLETGTLRIAL-----INCPNELLFCCERGFSTFSDRNLSYRDKLS 61
Query: 165 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAA 224
+ ++A+ L+R+M+ PTV+ +N LF + + Q E L L ++M+ +A
Sbjct: 62 SGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAH 121
Query: 225 DTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF 284
T + I+ C+ + A + L E D +N L++GLC R+ ALEL
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 285 RSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
+ ++T N +++GLC +G++ A L M E PN + + +++ +
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 345 NKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ + +ELL KM+E+ + DA S+++D
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIID 271
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 217/364 (59%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K + TY+TIID LC++G +D A +LF +M+ + I VVTYNSL+ GLC A WN+
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+ + + P+V+TFNV++D K GK+ EA+ L M+ R + PN TY+TLMDG+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A + M C D V++ LI GYC K V++ + ++R + +G+ V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY+ L G + +++ A +LF+EM V D TY +DGLC NG + +A+E+F L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K +L I Y +I+G+CK G++E A LF SLP + + +V+TY +MI GLC G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A+ L MEE+ APN + TLI +R + +L+ +MK DAS + MV
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Query: 373 VDLL 376
+D+L
Sbjct: 585 IDML 588
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 184/357 (51%), Gaps = 35/357 (9%)
Query: 41 QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
Q++ I ++ T N +I+ C A + ++M G +P TFN ++ L G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K+ EA L+D MV+ +P+ TY+++++G C +G + A +L ME K D +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL------------------- 201
+I+ C++ ++ A+SL++EM +KGIK +VVTYN+L GL
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 202 --------FEI--------HQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
F + +++ A +L++EM ++ + TYNT +DG C + EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
+ + KC DI + LI G C R++ +++FR++ +R LVA+ VTY+I++ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
C G++ A +LF +M + V P+V+ + L+ G K K +E+ +++ K+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 178/341 (52%)
Query: 33 DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
D A ALF +M P +V ++ + +N ++ G+ ++ T N++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 93 MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
++ C+ K A +L +++ P+ T++TL+ G L GK++ A L M GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
+ D V+YN ++NG C++ + AL L R+M + +K V TY+T+ L ++ A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
LF+EM+ + + TYN+ + GLCK G + L + + + ++ +N L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
K G+L+ A EL++ + R + +++TYN ++ G C ++ +A+++ M N +P+++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
F +LI G+ + + +++ + ++ ++ +A S++V
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 4/295 (1%)
Query: 84 PSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
S+ NV E ++G K D+A L M++ P+ +S T + N
Sbjct: 47 SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL 106
Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
+ +E G H+ + NI+IN +C+ + A S+ +++ G +P T+NTL
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
GLF +V A+ L + M + D TYN+ ++G+C++G A++L R + +
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
D+ Y+ +ID LC+ G ++ A+ LF+ + + + + VVTYN ++ GLC G+ + L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
DM + PNVI F L+ FV+ K + EL +M + + P+ + ++D
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 118/225 (52%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ VT+ ++I G C VD +F + + + VTY+ L+ G C + A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM+ GV P V+T+ +++D LC NGK+++A + + + + + Y+T+++G
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK+ A LF S+ G K + ++Y ++I+G CK + EA L R+M G P
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
TYNTL + + KL EEM+ +AD S+ ID L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
G+ +I + + A+ LF+EM R ++ F + + ++ + L +
Sbjct: 63 GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121
Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
+I N +I+ C+ + A + + + D T+N +I GL +G++ +A L
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
M EN P+V+ + ++++G R S ++LL KM+E+ V D S ++D L
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 220/364 (60%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K + V Y+ +ID LCK+G D A +LF +M+ + I DVVTY+SLI GLC+ W++ +
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ EM+ + + P VVTF+ ++D K GK+ EA L + M+ R + P+ TY++L+DGFC
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
++ A ++F M S GC+ D V+Y+ILIN YCK K V++ + L+RE+ SKG+ P +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL LG + ++ A +LF+EM V TY +DGLC NG + +A+E+F +
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ L I YN +I G+C + +++ A LF SL + + DVVTYN+MI GLC G +
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A LF M+E+ P+ + LI + + +EL+ +MK D+S + MV
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Query: 373 VDLL 376
+D+L
Sbjct: 602 IDML 605
Score = 238 bits (607), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 201/353 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VTY +++ LCK G A LF +M+ NI VV Y+ +I LC +++A
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF EM +G++ VVT++ ++ LC +GK D+ +++L M+ R++ P+ T+S L+D F
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK+ A+EL+ M + G D ++YN LI+G+CK + EA ++ MVSKG +P +V
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY+ L + +V+ ++LF E+ + +T TYNT + G C++G + A ELF+ +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ Y L+DGLC +G L ALE+F + + + + YNI+IHG+CN ++
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
D A LF + + V P+V+ + +I G + S+ L KMKE PD
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 205/361 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+T+T++T+++G C EG V +A AL +M PD+VT ++LI+GLC +EA
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M++ G QP VT+ +++ LCK+G A L M +R+++ + YS ++D C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G + A LF ME G K D V+Y+ LI G C + + ++ + REM+ + I P VV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T++ L + ++ A +L+ EM +A DT TYN+ IDG CK + EA ++F +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
CE DI Y+ LI+ CK+ R++ + LFR + + L+ + +TYN ++ G C G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+ A +LF +M V P+V+ + L+ G + +K +E+ KM++ ++ I +++
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 373 V 373
+
Sbjct: 497 I 497
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 174/328 (53%)
Query: 49 PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
PD +T+++L++G C +EA L M++ +P +VT + +++ LC G++ EA L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
+D MV+ +P+ TY +++ C +G A +LF ME K V Y+I+I+ CK
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
+ ++ALSL+ EM KGIK VVTY++L GL + + K+ EM ++ D T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
++ ID K G ++EA EL+ + D YN LIDG CK L A ++F +
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
+ D+VTY+I+I+ C ++D LF ++ + PN I + TL+ GF + K +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 349 KVIELLHKMKEKKVMPDASIVSMVVDLL 376
EL +M + V P +++D L
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 169/343 (49%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
V+ A LF M P + +N L + ++ M G++ + T +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ K+ A +L + P+ T+STL++GFCL G+++ A L M M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ D V+ + LING C V EAL L MV G +P VTY + L + AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
LF +M+ ++ A Y+ ID LCK+G +A+ LF + + + D+ Y+ LI GL
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C G+ + ++ R + R ++ DVVT++ +I +G++ +A +L+ +M +AP+
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
I + +LI GF + N + ++ M K PD S++++
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 127/225 (56%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ VTY+ +I+ CK VD LF ++ + + P+ +TYN+L+ G C + N AK
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM+ +GV PSVVT+ +++D LC NG++++A + + M + + Y+ ++ G
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C K++ A LF S+ G K D V+YN++I G CK + EA L+R+M G P
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
TYN L + +++L EEM+ +AD+ST ID L
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 150/317 (47%), Gaps = 8/317 (2%)
Query: 68 NEAKRLFFEMMDQGVQ----PSVVTFNVIMDELCKNG----KMDEASRLLDLMVQRDVRP 119
N F +++++G S+ + E +NG K+++A L + M+Q P
Sbjct: 9 NRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP 68
Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
++ L T + + ME G +HD + I+IN YC+ K++ A S+
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
G +P +T++TL G +V A+ L + M D T +T I+GLC
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
G + EA+ L + + D Y +++ LCKSG +AL+LFR + R + A VV Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
+I+I LC DG D A LF +ME + +V+ + +LI G K ++L +M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 360 KKVMPDASIVSMVVDLL 376
+ ++PD S ++D+
Sbjct: 309 RNIIPDVVTFSALIDVF 325
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 278 bits (712), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 228/364 (62%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ + V +NTIID LCK VD A LF +M+ + I P+VVTY+SLI LC W++A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P++VTFN ++D K GK EA +L D M++R + P+ FTY++L++GFC
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ ++++A+++F M S C D +YN LI G+CK+K VE+ L+REM +G+ V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL GLF ++A K+F++M D V D TY+ +DGLC NG + +A+E+F +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ +LDI Y +I+G+CK+G+++ +LF SL + + +VVTYN MI GLC+ +
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A+ L M+E+ P+ + TLI +R + EL+ +M+ + + DAS + +V
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 373 VDLL 376
++L
Sbjct: 542 ANML 545
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 201/395 (50%), Gaps = 35/395 (8%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N TYN +I+ C+ + A AL +M P +VT +SL++G CH ++A L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M++ G +P +TF ++ L + K EA L+D MVQR +PN TY +++G C
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G I+ A L ME+ + D V +N +I+ CK + V++AL+L++EM +KGI+P VVTY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 195 NTL-------------------------------FLGLFEIHQVE----HALKLFEEMQR 219
++L F L + E A KL ++M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
+ D TYN+ I+G C + + +A ++F + C D+ YN LI G CKS R+E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
ELFR + R LV D VTY +I GL +DG D A +F M + V P+++ + L+
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
G K K +E+ M++ ++ D I + +++
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 196/396 (49%), Gaps = 35/396 (8%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+T+T+ T+I GL +A AL +M P++VTY +++GLC D + A
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M ++ VV FN I+D LCK +D+A L M + +RPN TYS+L+ C
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G+ + A +L M + V++N LI+ + K + EA L+ +M+ + I P +
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYN+L G +++ A ++FE M D D TYNT I G CK+ + + ELFR +
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 253 ---GIL-----------------KCE---------------LDIQAYNCLIDGLCKSGRL 277
G++ C+ DI Y+ L+DGLC +G+L
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
E ALE+F + + + D+ Y MI G+C G++D DLF + V PNV+ + T+
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
I G + LL KMKE +PD+ + ++
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 163/317 (51%)
Query: 49 PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL 108
P + +N L+ + ++ L +M G+ ++ T+N++++ C+ ++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 109 LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 168
L M++ P+ T S+L++G+C +I+ A L M MG + D +++ LI+G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 169 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
+ + EA++L MV +G +P +VTY + GL + ++ A L +M+ + AD
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 229 YNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP 288
+NT ID LCK ++ +A+ LF+ + ++ Y+ LI LC GR A +L +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 289 RRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS 348
+ + ++VT+N +I +G+ +A L DM + ++ P++ + +LI+GF ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 349 KVIELLHKMKEKKVMPD 365
K ++ M K PD
Sbjct: 308 KAKQMFEFMVSKDCFPD 324
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 135/263 (51%)
Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
MV+ P+ F ++ L+ K + L M+ +G H+ +YNILIN +C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
+ AL+L +M+ G +P++VT ++L G ++ A+ L ++M DT T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
I GL + EAV L + C+ ++ Y +++GLCK G +++A L +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
+ ADVV +N +I LC +D A +LF +ME + PNV+ + +LI + S
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 352 ELLHKMKEKKVMPDASIVSMVVD 374
+LL M EKK+ P+ + ++D
Sbjct: 241 QLLSDMIEKKINPNLVTFNALID 263
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%)
Query: 182 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
MV P++ +N L + ++ + + + L E+MQR ++ + TYN I+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 242 IVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNI 301
I A+ L + L E I + L++G C R+ A+ L + D +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 302 MIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
+IHGL + +A L M + PN++ + +++G + LL+KM+ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 362 VMPDASIVSMVVDLL 376
+ D I + ++D L
Sbjct: 181 IEADVVIFNTIIDSL 195
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 277 bits (709), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 220/364 (60%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K + V Y+ IIDGLCK G +D A LF +M+ + I +++TYN LI G C+A W++ +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+ + + P+VVTF+V++D K GK+ EA L M+ R + P+ TY++L+DGFC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+++A ++ M S GC + ++NILINGYCK +++ L L+R+M +G+ V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G E+ ++ A +LF+EM V + TY +DGLC NG +A+E+F +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K ELDI YN +I G+C + +++ A +LF SLP + + V TYNIMI GLC G +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A LF MEE+ AP+ + LI + +K ++L+ ++K DAS + MV
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 373 VDLL 376
+D+L
Sbjct: 620 IDML 623
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 214/361 (59%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PNT+T++T+I+GLC EG V +A L +M PD++T N+L++GLC + EA
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M++ G QP+ VT+ +++ +CK+G+ A LL M +R+++ +A YS ++DG C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G ++ A LF ME G + ++YNILI G+C ++ L R+M+ + I P VV
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T++ L + ++ A +L +EM +A DT TY + IDG CK ++ +A ++ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C+ +I+ +N LI+G CK+ R++ LELFR + R +VAD VTYN +I G C G++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+ A +LF +M V PN++ + L+ G + K +E+ K+++ K+ D I +++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 373 V 373
+
Sbjct: 515 I 515
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 201/362 (55%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+PN VTY +++ +CK G A L +M+ NI D V Y+ +I GLC + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM +G+ +++T+N+++ C G+ D+ ++LL M++R + PN T+S L+D F
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
GK+ AEEL M G D ++Y LI+G+CK +++A + MVSKG P +
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
T+N L G + ++++ L+LF +M V ADT TYNT I G C+ G + A ELF+
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ K +I Y L+DGLC +G E ALE+F + + + D+ YNI+IHG+CN +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+D A DLF + V P V + +I G + S+ L KM+E PD ++
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 372 VV 373
++
Sbjct: 584 LI 585
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 178/343 (51%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
D A LF M P V+ ++ L + ++ L +M +G+ ++ T ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ K+ A + +++ PN T+STL++G CL G+++ A EL M MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
K D ++ N L+NG C + + EA+ L +MV G +P VTY + + + Q A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
+L +M+ ++ D Y+ IDGLCK+G + A LF + + +I YN LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C +GR + +L R + +R + +VVT++++I +G++ +A +L +M +AP+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
I + +LI GF + N K +++ M K P+ +++++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 119/225 (52%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN T+N +I+G CK +D LF +M + D VTYN+LI G C N AK
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM+ + V P++VT+ +++D LC NG+ ++A + + + + + + Y+ ++ G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C K++ A +LF S+ G K +YNI+I G CK + EA L+R+M G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
TYN L ++KL EE++R + D ST ID L
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K D+A L M+ P +S L T + + L ME G H+ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
I+IN +C+ +++ A S +++ G +P +T++TL GL +V AL+L + M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
D T NT ++GLC +G EA+ L + C+ + Y +++ +CKSG+ +A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
+EL R + R + D V Y+I+I GLC G +D A +LF +ME + N+I + LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
F + +LL M ++K+ P+ S+++D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
+ ++A+ L+R+M+ PTV+ ++ LF + + Q + L L ++M+ +A + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
I NC C+ +L +A + +
Sbjct: 128 IMI-------------------------------NCF----CRCRKLCLAFSAMGKIIKL 152
Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
+ +T++ +I+GLC +G++ +A +L M E P++I TL++G K ++
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
+ L+ KM E P+A V++++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVM 238
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 277 bits (709), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 218/364 (59%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K + V Y+ IIDGLCK+G +D A LF +M+ + D++ Y +LI G C+A W++ +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+ + + P VV F+ ++D K GK+ EA L M+QR + P+ TY++L+DGFC
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
++++A + M S GC + ++NILINGYCK +++ L L+R+M +G+ V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G E+ ++E A +LF+EM V D +Y +DGLC NG +A+E+F +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K ELDI YN +I G+C + +++ A +LF SLP + + DV TYNIMI GLC G +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A LF MEE+ +PN + LI + +K +L+ ++K DAS V MV
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 373 VDLL 376
VD+L
Sbjct: 604 VDML 607
Score = 228 bits (580), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 195/361 (54%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN VTY ++ +CK G A L +M+ I D V Y+ +I GLC + A
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF EM +G + ++ + ++ C G+ D+ ++LL M++R + P+ +S L+D F
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK+ AEEL M G D V+Y LI+G+CK ++++A + MVSKG P +
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N L G + + ++ L+LF +M V ADT TYNT I G C+ G + A ELF+ +
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ DI +Y L+DGLC +G E ALE+F + + + D+ YNI+IHG+CN ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D A DLF + V P+V + +I G + S+ L KM+E P+ +++
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 373 V 373
+
Sbjct: 569 I 569
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 205/361 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+TVT++T+I+GLC EG V +A L +M P ++T N+L++GLC ++A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M++ G QP+ VT+ ++ +CK+G+ A LL M +R ++ +A YS ++DG C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G ++ A LF ME G K D + Y LI G+C ++ L R+M+ + I P VV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
++ L + ++ A +L +EM + ++ DT TY + IDG CK + +A + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C +I+ +N LI+G CK+ ++ LELFR + R +VAD VTYN +I G C G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+ A +LF +M V P+++ + L+ G +P K +E+ K+++ K+ D I +++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 373 V 373
+
Sbjct: 499 I 499
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 176/342 (51%)
Query: 33 DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
D A LF +M P ++ ++ L + ++ L +M +G+ ++ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 93 MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
++ C+ K+ A + +++ P+ T+STL++G CL G+++ A EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
K ++ N L+NG C N +V +A+ L MV G +P VTY + + + Q A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
L +M+ + D Y+ IDGLCK+G + A LF + I + DI Y LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
+GR + +L R + +R + DVV ++ +I +G++ +A +L +M + ++P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ +LI GF + N+ K +L M K P+ +++++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 118/225 (52%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN T+N +I+G CK +D LF +M + D VTYN+LI G C AK
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM+ + V+P +V++ +++D LC NG+ ++A + + + + + + Y+ ++ G
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C K++ A +LF S+ G K D +YNI+I G CK + EA L+R+M G P
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
TYN L + KL EE++R + D ST +D L
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K D+A L M + RP +S L T + + +L ME G H+ + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
I+IN C+ +++ A S +++ G +P VT++TL GL +V AL+L + M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
T N ++GLC NG + +AV L + + + Y ++ +CKSG+ +A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
+EL R + R + D V Y+I+I GLC DG +D A +LF +ME ++II+ TLI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
F + +LL M ++K+ PD S ++D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 224/364 (61%), Gaps = 3/364 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K N V +NTIID LCK V+ A LF +M+ + I P+VVTYNSLI+ LC+ W++A R
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M+++ + P+VVTFN ++D K GK+ EA +L + M+QR + P+ TY+ L++GFC
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+++F M S C + +YN LING+CK K VE+ + L+REM +G+ V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY T+ G F+ + A +F++M + V D TY+ + GLC G + A+ +F+ L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ EL+I YN +I+G+CK+G++ A +LF SL + DVVTYN MI GLC+ +
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLL 551
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A DLF M+E+ PN + TLI +R + EL+ +M+ + DAS +S+V
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
Query: 373 VDLL 376
++L
Sbjct: 612 TNML 615
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 180/334 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT +++++G C + A AL QM PD T+ +LIHGL N +EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+ +G QP +VT+ +++ LCK G +D A LL+ M ++ N ++T++D C
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ A +LF ME+ G + + V+YN LIN C +A L M+ K I P VV
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N L F+ ++ A KL EEM + + DT TYN I+G C + + EA ++F+ +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C +IQ YN LI+G CK R+E +ELFR + +R LV + VTY +I G G
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
D A +F M N V +++ + L+HG K
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 191/360 (53%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V +N ++ + K + +L QM+ I+ D+ TY+ I+ C + + A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G +P +VT + +++ C + ++ +A L+D MV+ +P+ FT++TL+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K + A L M GC+ D V+Y ++NG CK +++ AL+L +M + IK VV
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+NT+ L + VE A+ LF EM+ + + TYN+ I+ LC G +A L +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
K ++ +N LID K G+L A +L + +R + D +TYN++I+G C ++D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A +F M PN+ + TLI+GF + + +EL +M ++ ++ + + ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 166/307 (54%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A LF +M+ PS+V FN ++ + K K + L + M + + +TYS
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC +++ A + M +G + D V+ + L+NGYC +K + +A++L +MV G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
KP T+ TL GLF ++ A+ L ++M + D TY T ++GLCK G I A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + + + ++ +N +ID LCK +E+A++LF + + + +VVTYN +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
N G+ A L +M E + PNV+ F LI F + K + +L +M ++ + PD
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 368 IVSMVVD 374
+++++
Sbjct: 365 TYNLLIN 371
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 176/343 (51%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
VD A LF M P +V +N L+ + N + L +M G+ + T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
++ C+ ++ A +L M++ P+ T S+L++G+C + +I+ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
K D ++ LI+G + + EA++L +MV +G +P +VTY T+ GL + ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L +M+ + A+ +NT ID LCK ++ AV+LF + ++ YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L ++ + + +VVT+N +I +G++ +A L +M + ++ P+
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
I + LI+GF N+ + ++ M K +P+ + +++
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 70 AKRLFFEMMDQGV--QPSVVTF---------------------NVIMDELCKNGKMDEAS 106
AKRLF QG+ P+V +F ++ + L K+D+A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 107 RLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGY 166
L MV+ P+ ++ L+ K L M+++G HD +Y+I IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 167 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADT 226
C+ ++ AL++ +M+ G +P +VT ++L G ++ A+ L ++M DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 227 STYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS 286
T+ T I GL + EAV L + C+ D+ Y +++GLCK G +++AL L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 287 LPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINK 346
+ + A+VV +N +I LC ++ A DLF +ME + PNV+ + +LI+ +
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 347 PSKVIELLHKMKEKKVMPDASIVSMVVD 374
S LL M EKK+ P+ + ++D
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALID 336
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 104/206 (50%)
Query: 171 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYN 230
+V++A+ L+ +MV P++V +N L + ++++ E + L E+MQ ++ D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 231 TFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
FI+ C+ + A+ + + L E DI + L++G C S R+ A+ L +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 291 VLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKV 350
D T+ +IHGL + +A L M + P+++ + T+++G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 351 IELLHKMKEKKVMPDASIVSMVVDLL 376
+ LL+KM+ ++ + I + ++D L
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSL 268
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 201/318 (63%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ N V Y+T+ID LCK D A LF +M+ + + P+V+TY+SLI LC+ W++A R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P+VVTFN ++D K GK+ EA +L D M++R + P+ FTYS+L++GFC
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ +++ A+ +F M S C + V+YN LING+CK K ++E + L+REM +G+ V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL G F+ ++A +F++M D V + TYNT +DGLCKNG + +A+ +F L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K E I YN +I+G+CK+G++E +LF SL + + DV+ YN MI G C G
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 313 DKAHDLFLDMEENAVAPN 330
++A LF M E+ P+
Sbjct: 557 EEADALFRKMREDGPLPD 574
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 195/362 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT +++++G C + A AL QM PD +T+ +LIHGL N +EA
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M+ +G QP++VT+ V+++ LCK G +D A LL+ M + N YST++D C
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ A LF ME+ G + + ++Y+ LI+ C + +A L +M+ + I P VV
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N L + ++ A KL++EM + + D TY++ I+G C + + EA +F +
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C ++ YN LI+G CK+ R++ +ELFR + +R LV + VTY +IHG
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D A +F M + V PN++ + TL+ G + K K + + ++ K+ P +++
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 373 VD 374
++
Sbjct: 512 IE 513
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 191/362 (52%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N TYN +I+ C+ + A AL +M P +VT +SL++G CH ++A L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M++ G +P +TF ++ L + K EA L+D MVQR +PN TY +++G C
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G I+ A L ME+ + + V Y+ +I+ CK + ++AL+L+ EM +KG++P V+TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
++L L + A +L +M + + T+N ID K G +VEA +L+ +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
+ DI Y+ LI+G C RL+ A +F + + +VVTYN +I+G C ++D+
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+LF +M + + N + + TLIHGF + + +M V P+ + ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 375 LL 376
L
Sbjct: 479 GL 480
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 163/321 (50%)
Query: 54 YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
Y ++ H+ ++A LF M+ PS+ FN ++ + K K D L + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
+ + N +TY+ L++ FC +I+ A L G M +G + V+ + L+NGYC K +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
+A++L +MV G +P +T+ TL GLF ++ A+ L + M + + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
+GLCK G I A L + K E ++ Y+ +ID LCK + AL LF + + +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
+V+TY+ +I LCN + A L DM E + PNV+ F LI FV+ K + +L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 354 LHKMKEKKVMPDASIVSMVVD 374
+M ++ + PD S +++
Sbjct: 353 YDEMIKRSIDPDIFTYSSLIN 373
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 174/364 (47%), Gaps = 35/364 (9%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A LF M P + +N L+ + ++ L +M G+ ++ T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A LL M++ P+ T S+L++G+C +I+ A L M MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ D +++ LI+G + + EA++L MV +G +P +VTY + GL + ++ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL-------------GILKC- 257
L +M+ + A+ Y+T ID LCK + +A+ LF + ++ C
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 258 ---------------------ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
++ +N LID K G+L A +L+ + +R + D+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
TY+ +I+G C ++D+A +F M PNV+ + TLI+GF + + + +EL +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 357 MKEK 360
M ++
Sbjct: 426 MSQR 429
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 117/215 (54%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ TY+++I+G C +D+AK +F M ++ P+VVTYN+LI+G C A +E L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F EM +G+ + VT+ ++ + D A + MV V PN TY+TL+DG C
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
GK+ +A +F ++ + +YNI+I G CK +VE+ L+ + KG+KP V+
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
YNT+ G E A LF +M+ D D+ T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 95 ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
E+ +NG K+D+A L MV+ P+ F ++ L+ K + L M+ +
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
G H+ +YNILIN +C+ ++ AL+L +M+ G +P++VT ++L G ++ A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
+ L ++M DT T+ T I GL + EAV L+D
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-------------------ALVDR 215
Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
+ + G ++VTY ++++GLC G +D A +L ME + N
Sbjct: 216 MVQRG----------------CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
V+I+ T+I + + L +M+ K V P+ S ++ L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 214/363 (58%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN VTY +I LCK G V+ A F QM E ++P + YNSLIHGLC N W A+ L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM+D+G+ + + FN I+D CK G++ E+ +L +LMV+ V+PN TY+TL++G+CL
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
GK++ A +L M S+G K + V+Y+ LINGYCK +E+AL L++EM S G+ P ++T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN + GLF+ + A +L+ + + STYN + GLCKN +A+++F+ L
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
++ +L+ + +N +ID L K GR + A +LF + LV + TY +M + G ++
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+ LFL ME+N + + ++ ++ + ++ L + EK +AS S+ +
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763
Query: 374 DLL 376
DLL
Sbjct: 764 DLL 766
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 190/352 (53%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ VTYN+II LCK +DKA + M + PD +TYNS++HG C + EA
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M GV+P VVT++++MD LCKNG+ EA ++ D M +R ++P TY TL+ G+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G + L M G D ++ILI Y K +V++A+ ++ +M +G+ P VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y + L + +VE A+ FE+M + ++ YN+ I GLC A EL +
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
L+ +N +ID CK GR+ + +LF + R + +V+TYN +I+G C G+MD
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+A L M + PN + + TLI+G+ +I++ + L +M+ V PD
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 198/360 (55%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ +TYN+I+ G C G +A +M+ + + PDVVTY+ L+ LC EA+++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F M +G++P + T+ ++ G + E LLDLMV+ + P+ + +S L+ +
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
GK+++A +F M G + V+Y +I CK+ VE+A+ + +M+ +G+ P +
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN+L GL ++ E A +L EM + +T +N+ ID CK G ++E+ +LF +
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ + ++ YN LI+G C +G+++ A++L + L + VTY+ +I+G C +M+
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A LF +ME + V+P++I + ++ G + + + EL ++ E + S ++++
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Score = 204 bits (519), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 200/360 (55%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ ++ +I K+G VD+A +F +M+ + +NP+ VTY ++I LC + +A
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F +M+D+G+ P + +N ++ LC K + A L+ M+ R + N +++++D C
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G++ +E+LF M +G K + ++YN LINGYC +++EA+ L MVS G+KP VT
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y+TL G +I ++E AL LF+EM+ V+ D TYN + GL + A EL+ +
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
++++ YN ++ GLCK+ + AL++F++L L + T+NIMI L G+ D
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A DLF+ N + PN + + + ++ +L M++ D+ +++ +V
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 167/337 (49%), Gaps = 4/337 (1%)
Query: 44 GENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMD 103
+ + PD+ TY LI C A + ++ +G + + F ++ LC + +
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139
Query: 104 EASRL-LDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSM---ESMGCKHDDVSY 159
+A + L M + PN F+Y+ L+ G C + A EL M G D VSY
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQR 219
+ING+ K + ++A S Y EM+ +GI P VVTYN++ L + ++ A+++ M +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 220 DDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
+ V D TYN+ + G C +G EA+ + + E D+ Y+ L+D LCK+GR
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
A ++F S+ +R L ++ TY ++ G G + + H L M N + P+ +F LI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ + K + + + KM+++ + P+A V+ +L
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 7 EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
IGV KPN +TYNT+I+G C G +D+A L M + P+ VTY++LI+G C +
Sbjct: 504 RIGV--KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 67 WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
+A LF EM GV P ++T+N+I+ L + + A L + + + TY+
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
++ G C + A ++F ++ M K + ++NI+I+ K +EA L+ S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
+ P TY + + +E +LF M+ + D+ N + L + G I A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRR 290
+ L+ + ID L G+ + E +R LP +
Sbjct: 742 TYLSMIDEKHFSLEASTASLFID-LLSGGKYQ---EYYRFLPEK 781
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%)
Query: 5 NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
+G + V KPNTVTY+T+I+G CK ++ A LF +M+ ++PD++TYN ++ GL
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 65 NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
AK L+ + + G Q + T+N+I+ LCKN D+A ++ + D++ A T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
+ ++D G+ + A++LF + S G + +Y ++ +EE L+ M
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY 241
G N + L + ++ A + + + ST + FID L Y
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 265 bits (676), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 201/324 (62%), Gaps = 2/324 (0%)
Query: 7 EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
EIG KP+ V YN IID LCK V+ A F +++ + I P+VVTY +L++GLC+++
Sbjct: 183 EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 67 WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
W++A RL +M+ + + P+V+T++ ++D KNGK+ EA L + MV+ + P+ TYS+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
L++G CL +I+ A ++F M S GC D VSYN LING+CK K VE+ + L+REM +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
+ VTYNTL G F+ V+ A + F +M ++ D TYN + GLC NG + +A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
+F + + +LDI Y +I G+CK+G++E A LF SL + L D+VTY M+ GL
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 307 CNDGQMDKAHDLFLDMEENAVAPN 330
C G + + L+ M++ + N
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKN 504
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 204/358 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT ++++G C+ V A +L +M PD+V YN++I LC N+A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
F E+ +G++P+VVT+ +++ LC + + +A+RLL M+++ + PN TYS L+D F
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK+ A+ELF M M D V+Y+ LING C + ++EA ++ MVSKG VV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
+YNTL G + +VE +KLF EM + + ++T TYNT I G + G + +A E F +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
DI YN L+ GLC +G LE AL +F + +R + D+VTY +I G+C G++
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
++A LF + + P+++ + T++ G +V L KMK++ +M + +S
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 194 bits (493), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 193/360 (53%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V +N ++ + K D +L +M+ I D+ T+N +I+ C + A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M+ G +P VT +++ C+ ++ +A L+D MV+ +P+ Y+ ++D C
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
T ++N A + F +E G + + V+Y L+NG C + +A L +M+ K I P V+T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y+ L + +V A +LFEEM R + D TY++ I+GLC + I EA ++F +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C D+ +YN LI+G CK+ R+E ++LFR + +R LV++ VTYN +I G G +D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
KA + F M+ ++P++ + L+ G + K + + M+++++ D + V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 189/348 (54%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
T+N +I+ C V A ++ +M PD VT SL++G C N ++A L +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 78 MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
++ G +P +V +N I+D LCK ++++A + ++ +RPN TY+ L++G C + +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
+ A L M + ++Y+ L++ + KN +V EA L+ EMV I P +VTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
GL +++ A ++F+ M AD +YNT I+G CK + + ++LFR +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
+ YN LI G ++G ++ A E F + + D+ TYNI++ GLC++G+++KA
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+F DM++ + +++ + T+I G + K + L + K + PD
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 169/328 (51%)
Query: 38 LFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELC 97
LF M P +V +N L+ + ++ L +M G++ + TFN++++ C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 98 KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
++ A +L M++ P+ T +L++GFC +++ A L M +G K D V
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
+YN +I+ CK K V +A ++E+ KGI+P VVTY L GL + A +L +M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
+ + + TY+ +D KNG ++EA ELF + + + DI Y+ LI+GLC R+
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
+ A ++F + + +ADVV+YN +I+G C +++ LF +M + + N + + TL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPD 365
I GF + K E +M + PD
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 159/299 (53%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
N+A LF +M+ PS+V FN ++ + K K D L M +R + +T++ +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC +++ A + G M +G + D V+ L+NG+C+ V +A+SL +MV G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
KP +V YN + L + +V A F+E++R + + TY ++GLC + +A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + K ++ Y+ L+D K+G++ A ELF + R + D+VTY+ +I+GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
++D+A+ +F M +V+ + TLI+GF + + ++L +M ++ ++ +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%)
Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
K+N A +LF M V +N L++ K K+ + +SL ++M GI+ + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGIL 255
+ QV AL + +M + D T + ++G C+ + +AV L + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 256 KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKA 315
+ DI AYN +ID LCK+ R+ A + F+ + R+ + +VVTY +++GLCN + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 316 HDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
L DM + + PNVI + L+ FV+ K + EL +M + PD S +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 133/257 (51%), Gaps = 3/257 (1%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K+++A L MV+ P+ ++ L+ K + L ME +G ++D ++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
I+IN +C +V ALS+ +M+ G +P VT +L G ++V A+ L ++M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
D YN ID LCK + +A + F+ + ++ Y L++GLC S R A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
L + ++ + +V+TY+ ++ +G++ +A +LF +M ++ P+++ + +LI+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 341 FV---RINKPSKVIELL 354
RI++ +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 244 EAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMI 303
+A++LF + + I +N L+ + K + ++ + L + + + D+ T+NI+I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 304 HGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
+ C Q+ A + M + P+ + +L++GF R N+ S + L+ KM E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 364 PDASIVSMVVDLL 376
PD + ++D L
Sbjct: 188 PDIVAYNAIIDSL 200
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
D +++ A DLF DM ++ P+++ F L+ V++ K VI L KM+ + D
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 369 VSMVVD 374
++V++
Sbjct: 123 FNIVIN 128
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 197/317 (62%), Gaps = 3/317 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ V YNTIIDG CK G V+ A LF +M+ + + D VTYNSL+ GLC + W++A R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+ + + P+V+TF ++D K GK EA +L + M +R V P+ FTY++L++G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ G+++ A+++ M + GC D V+YN LING+CK+K V+E L+REM +G+ +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNT+ G F+ + + A ++F M D + TY+ + GLC N + +A+ LF +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ ELDI YN +I G+CK G +E A +LFRSL + L DVV+Y MI G C Q
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 313 DKAHDLFLDMEENAVAP 329
DK+ L+ M+E+ + P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 197/352 (55%), Gaps = 3/352 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT +++I+G C+ V A L +M+ PDVV YN++I G C N+A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF M GV+ VT+N ++ LC +G+ +A+RL+ MV RD+ PN T++ ++D F
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK + A +L+ M D +YN LING C + V+EA + MV+KG P VV
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G + +V+ KLF EM + + DT TYNT I G + G A E+F +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+I+ Y+ L+ GLC + R+E AL LF ++ + + D+ TYNI+IHG+C G +
Sbjct: 376 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
+ A DLF + + P+V+ + T+I GF R + K L KM+E ++P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 199/374 (53%), Gaps = 10/374 (2%)
Query: 7 EIGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIH 59
EI + CK P+ V ++ ++ + K D +LF M+ I D+ +YN +I+
Sbjct: 53 EIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112
Query: 60 GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
LC + + A + +MM G +P VVT + +++ C+ ++ +A L+ M + RP
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
+ Y+T++DG C G +N A ELF ME G + D V+YN L+ G C + +A L
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
R+MV + I P V+T+ + + + A+KL+EEM R V D TYN+ I+GLC +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
G + EA ++ + C D+ YN LI+G CKS R++ +LFR + +R LV D +TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
N +I G G+ D A ++F M+ PN+ + L++G + K + L M++
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 360 KKVMPDASIVSMVV 373
++ D + ++V+
Sbjct: 410 SEIELDITTYNIVI 423
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 130/264 (49%)
Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
++E L M+Q P+ +S ++ + + LF ME G HD SYNI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
+IN C+ ALS+ +M+ G +P VVT ++L G + ++V A+ L +M+
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
D YNT IDG CK G + +AVELF + D YN L+ GLC SGR A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
L R + R +V +V+T+ +I +G+ +A L+ +M V P+V + +LI+G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 342 VRINKPSKVIELLHKMKEKKVMPD 365
+ + ++L M K +PD
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPD 313
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 98/205 (47%)
Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
+EE + L+ +M+ P++V ++ + + + + + LF M+ + D +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
I+ LC+ V A+ + + E D+ + LI+G C+ R+ A++L +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
DVV YN +I G C G ++ A +LF ME + V + + + +L+ G + S
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
L+ M + ++P+ + V+D+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVF 254
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 211/364 (57%), Gaps = 4/364 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+ V Y+ IID LCK+G A+ LF +M + I P+V TYN +I G C W++A+R
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P V+TFN ++ K GK+ EA +L D M+ R + P+ TY++++ GFC
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ + A+ +F M S D V++N +I+ YC+ K V+E + L RE+ +G+
Sbjct: 413 KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G E+ + A LF+EM V DT T N + G C+N + EA+ELF +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ K +LD AYN +I G+CK +++ A +LF SLP + DV TYN+MI G C +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
A+ LF M++N P+ + TLI G ++ + K IEL+ +M+ DA + MV
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Query: 373 VDLL 376
DL+
Sbjct: 649 ADLI 652
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 21/377 (5%)
Query: 13 KPNTVTYNTIIDGLCKE----------------GFVDKAKALFLQMKGENINPDVVTYNS 56
+P+ VT+NT++ GLC E GF++ A ALF QM + P V+T+N+
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNT 231
Query: 57 LIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD 116
LI+GLC EA L +M+ +G+ VVT+ I++ +CK G A LL M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 117 VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 176
++P+ YS ++D C G + A+ LF M G + +YN +I+G+C +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
L R+M+ + I P V+T+N L + ++ A KL +EM + DT TYN+ I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
CK+ +A +F L D+ +N +ID C++ R++ ++L R + RR LVA+
Sbjct: 412 CKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
TYN +IHG C ++ A DLF +M + V P+ I L++GF K + +EL
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 357 MKEKKVMPDASIVSMVV 373
++ K+ D ++++
Sbjct: 528 IQMSKIDLDTVAYNIII 544
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 177/373 (47%), Gaps = 19/373 (5%)
Query: 16 TVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFF 75
V N +I + D A +L+ +M+ I ++ ++N LI C + + + F
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 76 EMMDQGVQPSVVTFNVIMDELCKNGKMD---------------EASRLLDLMVQRDVRPN 120
++ G QP VVTFN ++ LC ++ EA L D MV+ + P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
T++TL++G CL G++ A L M G D V+Y ++NG CK + + AL+L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
+M IKP VV Y+ + L + A LF EM +A + TYN IDG C G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 241 YIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYN 300
+A L R + + D+ +N LI K G+L A +L + R + D VTYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 301 IMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
MI+G C + D A +F M +P+V+ F T+I + R + + ++LL ++ +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 361 KVMPDASIVSMVV 373
++ + + + ++
Sbjct: 462 GLVANTTTYNTLI 474
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 124/225 (55%)
Query: 10 VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
++ P+ VT+NTIID C+ VD+ L ++ + + TYN+LIHG C ++ N
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A+ LF EM+ GV P +T N+++ C+N K++EA L +++ + + Y+ ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
G C K++ A +LF S+ G + D +YN++I+G+C + +A L+ +M G +P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
TYNTL G + +++ +++L EM+ + + D T D
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 18/310 (5%)
Query: 74 FFEMMDQGVQP--SVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
FF+ M + +P + V N ++ + + D A L M R + N ++++ L+ F
Sbjct: 93 FFDYMVRS-RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL--------------- 176
C K++ + FG + +G + D V++N L++G C + EAL
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 177 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGL 236
+L+ +MV G+ P V+T+NTL GL +V A L +M + D TY T ++G+
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 237 CKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADV 296
CK G A+ L + + D+ Y+ +ID LCK G A LF + + + +V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 297 VTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHK 356
TYN MI G C+ G+ A L DM E + P+V+ F LI V+ K + +L +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 357 MKEKKVMPDA 366
M + + PD
Sbjct: 392 MLHRCIFPDT 401
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 15/279 (5%)
Query: 102 MDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNI 161
+D+A D MV+ A + ++ F + + A L+ ME + S+NI
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL---------- 211
LI +C ++ +LS + ++ G +P VVT+NTL GL ++ AL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 212 -----KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
LF++M + T+NT I+GLC G ++EA L + +D+ Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
+++G+CK G + AL L + + DVV Y+ +I LC DG A LF +M E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+APNV + +I GF + S LL M E+++ PD
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
V N +I + + + A+SLYR+M + I + ++N L + H++ +L F +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
+ + D T+NT + GLC I EA+ LF Y + ++G
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------------GY------MVETGF 207
Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
LE A+ LF + L V+T+N +I+GLC +G++ +A L M + +V+ + T
Sbjct: 208 LE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+++G ++ + LL KM+E + PD I S ++D L
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 213/366 (58%), Gaps = 1/366 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ VTY +I+GLCK G D A L +M+ I DVV YN++I GLC ++A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF +M +G++P V T+N ++ LC G+ +ASRLL M+++++ P+ ++ L+D F
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 132 CLTGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
GK+ AE+L+ M +S C D V+YN LI G+CK K VEE + ++REM +G+
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
VTY TL G F+ ++A +F++M D V D TYN +DGLC NG + A+ +F
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
+ +LDI Y +I+ LCK+G++E +LF SL + + +VVTY M+ G C G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
++A LF++M+E+ PN + TLI +R + EL+ +M+ DAS
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 371 MVVDLL 376
+V ++L
Sbjct: 571 LVTNML 576
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 188/363 (51%), Gaps = 1/363 (0%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N TY+ I+ C+ + A A+ +M P +VT NSL++G CH N +EA L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M++ G QP VTF ++ L ++ K EA L++ MV + +P+ TY +++G C
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G+ + A L ME + D V YN +I+G CK K +++A L+ +M +KGIKP V TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
N L L + A +L +M ++ D +N ID K G +VEA +L+ +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 255 LK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
K C D+ AYN LI G CK R+E +E+FR + +R LV + VTY +IHG D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A +F M + V P+++ + L+ G + + M+++ + D + ++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 374 DLL 376
+ L
Sbjct: 469 EAL 471
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 181/364 (49%), Gaps = 1/364 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V ++ ++ + K D +L QM+ I+ ++ TY+ I+ C + + A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G PS+VT N +++ C ++ EA L+D MV+ +P+ T++TL+ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K + A L M GC+ D V+Y +ING CK E + AL+L +M I+ VV
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNT+ GL + ++ A LF +M+ + D TYN I LC G +A L +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLCNDGQM 312
D+ +N LID K G+L A +L+ + + + DVV YN +I G C ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++ ++F +M + + N + + TLIHGF + + +M V PD +++
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 373 VDLL 376
+D L
Sbjct: 433 LDGL 436
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 1/299 (0%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A LF +M+ PS+V F+ ++ + K K D L + M + N +TYS
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ FC +++ A + G M +G V+ N L+NG+C + EA++L +MV G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+P VT+ TL GLF+ ++ A+ L E M D TY I+GLCK G A+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + K E D+ YN +IDGLCK ++ A +LF + + + DV TYN +I LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMPD 365
N G+ A L DM E + P+++ F LI FV+ K + +L +M K K PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 174/330 (52%), Gaps = 1/330 (0%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A LF M P +V ++ L+ + N ++ L +M + G+ ++ T+++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
++ C+ ++ A +L M++ P+ T ++L++GFC +I+ A L M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
+ D V++ L++G ++ + EA++L MV KG +P +VTY + GL + + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L +M++ + AD YNT IDGLCK ++ +A +LF + + D+ YN LI L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPN 330
C GR A L + + + D+V +N +I +G++ +A L+ +M + P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEK 360
V+ + TLI GF + + + +E+ +M ++
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 139/274 (50%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
K+D+A L MV+ P+ +S L+ K + L M+++G H+ +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
I IN +C+ ++ AL++ +M+ G P++VT N+L G +++ A+ L ++M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
DT T+ T + GL ++ EAV L + + C+ D+ Y +I+GLCK G ++A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
L L + + + ADVV YN +I GLC MD A DLF ME + P+V + LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ S LL M EK + PD + ++D
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 254 bits (650), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 214/367 (58%), Gaps = 9/367 (2%)
Query: 1 MANGNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG 60
M N E+G+ KP+ V Y TIID LCK G V+ A +LF QM+ I PDVV Y SL++G
Sbjct: 164 MVNQMVEMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 61 LCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPN 120
LC++ W +A L M + ++P V+TFN ++D K GK +A L + M++ + PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 121 AFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 180
FTY++L++GFC+ G ++ A ++F ME+ GC D V+Y LING+CK K+V++A+ ++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 181 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNG 240
EM KG+ +TY TL G ++ + A ++F M V + TYN + LC NG
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 241 YIVEAVELFRTLGILKCELD-----IQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
+ +A+ +F + K E+D I YN L+ GLC +G+LE AL +F + +R +
Sbjct: 402 KVKKALMIFEDMQ--KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 296 VVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLH 355
++TY I+I G+C G++ A +LF + V PNV+ + T+I G R + L
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Query: 356 KMKEKKV 362
KMKE V
Sbjct: 520 KMKEDGV 526
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 199/367 (54%), Gaps = 3/367 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT+ ++I+G C +++A ++ QM I PDVV Y ++I LC N A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF +M + G++P VV + +++ LC +G+ +A LL M +R ++P+ T++ L+D F
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK AEEL+ M M + +Y LING+C V+EA ++ M +KG P VV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
Y +L G + +V+ A+K+F EM + + +T TY T I G + G A E+F +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL---VADVVTYNIMIHGLCND 309
+I+ YN L+ LC +G+++ AL +F + +R + ++ TYN+++HGLC +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
G+++KA +F DM + + +I + +I G + K + L + K V P+
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 370 SMVVDLL 376
+ ++ L
Sbjct: 499 TTMISGL 505
Score = 184 bits (467), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 181/349 (51%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ + + +++ + K D L ++ ++ D+ T N L++ C ++ A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G +P +VTF +++ C +M+EA +++ MV+ ++P+ Y+T++D C
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G +N A LF ME+ G + D V Y L+NG C + +A SL R M + IKP V+T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+N L + + A +L+ EM R +A + TY + I+G C G + EA ++F +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C D+ AY LI+G CK +++ A+++F + ++ L + +TY +I G G+ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
A ++F M V PN+ + L+H K K + + M+++++
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 163/307 (53%)
Query: 54 YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
Y ++ H+ +NEA LF M++ PS++ F +++ + K K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
V + +T + LM+ FC + + A G M +G + D V++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
EA+S+ +MV GIKP VV Y T+ L + V +AL LF++M+ + D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
+GLC +G +A L R + K + D+ +N LID K G+ A EL+ + R +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 294 ADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
++ TY +I+G C +G +D+A +F ME P+V+ + +LI+GF + K +++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 354 LHKMKEK 360
++M +K
Sbjct: 340 FYEMSQK 346
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 170/344 (49%)
Query: 33 DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
++A LF M P ++ + L++ + ++ L + GV + T N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 93 MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
M+ C++ + AS L M++ P+ T+++L++GFCL ++ A + M MG
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
K D V Y +I+ CKN V ALSL+ +M + GI+P VV Y +L GL + A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
L M + + D T+N ID K G ++A EL+ + + +I Y LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
G ++ A ++F + + DVV Y +I+G C ++D A +F +M + + N I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ TLI GF ++ KP+ E+ M + V P+ ++++ L
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 95 ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
E+ +NG + +EA L MV+ P+ ++ L++ K + L ++ M
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
G HD + N+L+N +C++ + A S +M+ G +P +VT+ +L G +++E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
+ + +M + D Y T ID LCKNG++ A+ LF + D+ Y L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
LC SGR A L R + +R + DV+T+N +I +G+ A +L+ +M ++APN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ + +LI+GF + ++ + M+ K PD + +++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 24/274 (8%)
Query: 105 ASRLLDLMVQRDVRPN---AFTYSTLMD-GFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
A R L R V+ N A ++S L+D F + N E L + S+
Sbjct: 2 AMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSL---------- 51
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
+ EAL L+ MV P+++ + L + ++ + + + L + +Q
Sbjct: 52 ----------QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
V+ D T N ++ C++ A + L E DI + LI+G C R+E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
+ + + + DVV Y +I LC +G ++ A LF ME + P+V+++ +L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ LL M ++K+ PD + ++D
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 193/327 (59%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+G+ KPN VTY T+I LCK ++ A LF QM P+VVTYN+L+ GLC W
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
+A L +MM + ++P+V+TF ++D K GK+ EA L ++M+Q V P+ FTY +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++G C+ G ++ A ++F ME GC ++V Y LI+G+CK+K VE+ + ++ EM KG+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+TY L G + + + A ++F +M D TYN +DGLC NG + +A+
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
+F + + +++I Y +I G+CK G++E A +LF SL + + +V+TY MI G C
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIF 334
G + +A LF M+E+ PN ++
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 199/356 (55%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT+ ++++G C ++ A ALF Q+ G P+VVTY +LI LC N A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF +M G +P+VVT+N ++ LC+ G+ +A+ LL M++R + PN T++ L+D F
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK+ A+EL+ M M D +Y LING C ++EA ++ M G P V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
Y TL G + +VE +K+F EM + V A+T TY I G C G A E+F +
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ DI+ YN L+DGLC +G++E AL +F + +R + ++VTY I+I G+C G++
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
+ A DLF + + PNVI + T+I GF R + L KMKE +P+ S+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 181/358 (50%), Gaps = 2/358 (0%)
Query: 18 TYNTII-DGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
+Y I+ +GL F D A LF +M P ++ + L+ + N ++ LF +
Sbjct: 50 SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 77 MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
M G+ P + T N++M +C + + AS L M++ P+ T+++L++G+C +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
I A LF + MG K + V+Y LI CKN+ + A+ L+ +M + G +P VVTYN
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
L GL EI + A L +M + + + T+ ID K G ++EA EL+ + +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
D+ Y LI+GLC G L+ A ++F + R + V Y +IHG C +++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+F +M + V N I + LI G+ + +P E+ ++M ++ PD ++++D
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 187/360 (51%), Gaps = 2/360 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ + + ++ + K D +LF QM+ I P + T N ++H +C ++ A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G +P +VTF +++ C ++++A L D ++ +PN TY+TL+ C
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+N A ELF M + G + + V+YN L+ G C+ +A L R+M+ + I+P V+T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+ L ++ ++ A +L+ M + V D TY + I+GLC G + EA ++F +
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C + Y LI G CKS R+E +++F + ++ +VA+ +TY ++I G C G+ D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A ++F M P++ + L+ G K K + + M+++++ D +IV+ +
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM--DINIVTYTI 438
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 190/323 (58%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+G+ KPN V YNTIIDGLCK VD A L +M+ + I PDVVTYNSLI GLC + W
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++A R+ M + + P V TFN ++D K G++ EA + M++R + P+ TYS L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
+ G C+ +++ AEE+FG M S GC D V+Y+ILINGYCK+K+VE + L+ EM +G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
VTY L G ++ A ++F M V + TYN + GLC NG I +A+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
+ + + DI YN +I G+CK+G + A +++ SL + L+ D+ TY M+ GL
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 308 NDGQMDKAHDLFLDMEENAVAPN 330
G +A LF M+E+ + PN
Sbjct: 478 KKGLRREADALFRKMKEDGILPN 500
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 201/357 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT+ ++++G C+ V A +F QM G P+VV YN++I GLC + + A
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M G+ P VVT+N ++ LC +G+ +A+R++ M +R++ P+ FT++ L+D
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G+++ AEE + M D V+Y++LI G C ++EA ++ MVSKG P VV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY+ L G + +VEH +KLF EM + V +T TY I G C+ G + A E+FR +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+I YN L+ GLC +G++E AL + + + + AD+VTYNI+I G+C G++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
A D++ + + P++ + T++ G + + L KMKE ++P+ V
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 186/357 (52%), Gaps = 2/357 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ ++ ++ + K D L+ QM+ I ++ T N L++ C + + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M+ G +PS+VTF +++ C+ ++ +A + D MV +PN Y+T++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+ +++ A +L ME G D V+YN LI+G C + +A + M + I P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+N L + +V A + +EEM R + D TY+ I GLC + EA E+F +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C D+ Y+ LI+G CKS ++E ++LF + +R +V + VTY I+I G C G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
A ++F M V PN+I + L+HG K K + +L M++ + DA IV+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM--DADIVT 433
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 168/334 (50%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D + LF M P + ++ L+ + ++ L+ +M G+ ++ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A L M++ P+ T+ +L++GFC ++ A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
K + V YN +I+G CK+K+V+ AL L M GI P VVTYN+L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
++ M + ++ D T+N ID K G + EA E + + + DI Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C RL+ A E+F + + DVVTY+I+I+G C +++ LF +M + V N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ + LI G+ R K + E+ +M V P+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 162/301 (53%)
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LFF M+ PS+ F+ ++ + K K D L + M + N T + L++ FC
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+++ A G M +G + V++ L+NG+C+ V +AL ++ +MV G KP VV
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
YNT+ GL + QV++AL L M++D + D TYN+ I GLC +G +A + +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ D+ +N LID K GR+ A E + + RR L D+VTY+++I+GLC ++
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D+A ++F M P+V+ + LI+G+ + K ++L +M ++ V+ + +++
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 373 V 373
+
Sbjct: 368 I 368
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 144/284 (50%), Gaps = 4/284 (1%)
Query: 95 ELCKNG----KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESM 150
E+ +NG K+D++ L MVQ P+ +S L+ K + L+ M+ +
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 151 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 210
G H+ + NIL+N +C+ ++ ALS +M+ G +P++VT+ +L G +V A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 211 LKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDG 270
L +F++M + YNT IDGLCK+ + A++L + D+ YN LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 271 LCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPN 330
LC SGR A + + +R + DV T+N +I +G++ +A + + +M ++ P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 331 VIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
++ + LI+G ++ + E+ M K PD S++++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 163 INGYCKNKEVEEALSLYREMVSKGIK--------------------PTVVTYNTLFLGLF 202
I G+C ++ S YREM+ GI+ P++ ++ L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 203 EIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQ 262
++ + + + L+E+MQ + + T N ++ C+ + A+ + L E I
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
+ L++G C+ R+ AL +F + +VV YN +I GLC Q+D A DL M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
E++ + P+V+ + +LI G + S ++ M ++++ PD + ++D
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 238 bits (607), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 189/321 (58%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN V YNT+I+GLCK ++ A +F M+ + I D VTYN+LI GL ++ W +A RL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M+ + + P+V+ F ++D K G + EA L M++R V PN FTY++L++GFC+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G + A+ +F M S GC D V+YN LI G+CK+K VE+ + L+ EM +G+ T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNTL G + ++ A K+F M V+ D TYN +D LC NG I +A+ + L
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ ++DI YN +I GLC++ +L+ A LFRSL R+ + D + Y MI GLC G
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 314 KAHDLFLDMEENAVAPNVIIF 334
+A L M+E+ P+ I+
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 194/356 (54%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT ++++G C+ +A +L M G P+VV YN++I+GLC D N A
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+F+ M +G++ VT+N ++ L +G+ +A+RLL MV+R + PN ++ L+D F
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G + A L+ M + +YN LING+C + + +A ++ MVSKG P VV
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G + +VE +KLF EM + D TYNT I G C+ G + A ++F +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
DI YN L+D LC +G++E AL + L + + D++TYNI+I GLC ++
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
+A LF + V P+ I ++T+I G R + +L +MKE MP I
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 186/363 (51%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V + ++ + K D L+ +M+ I+ D+ ++ LIH C + + A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+MM G +PS+VT +++ C+ + EA L+D M PN Y+T+++G C
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+N A E+F ME G + D V+YN LI+G + +A L R+MV + I P V+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+ L + + A L++EM R V + TYN+ I+G C +G + +A +F +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C D+ YN LI G CKS R+E ++LF + + LV D TYN +IHG C G+++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A +F M + V+P+++ + L+ K K + ++ +++ ++ D ++++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 374 DLL 376
L
Sbjct: 437 QGL 439
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%)
Query: 63 HANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
H +++A LF EM+ PS+V F ++ + K K D L M + + +
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
+++ L+ FC +++ A L G M +G + V+ L+NG+C+ +EA+SL M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
G P VV YNT+ GL + + +AL++F M++ + AD TYNT I GL +G
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
+A L R + K + ++ + LID K G L A L++ + RR +V +V TYN +
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
I+G C G + A +F M P+V+ + TLI GF + + ++L +M + +
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 363 MPDA 366
+ DA
Sbjct: 356 VGDA 359
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 4/238 (1%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN TYN++I+G C G + AK +F M + PDVVTYN+LI G C + + +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F EM QG+ T+N ++ C+ GK++ A ++ + MV V P+ TY+ L+D C
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
GKI +A + ++ D ++YNI+I G C+ +++EA L+R + KG+KP +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
Y T+ GL A KL M+ D Y D ++ Y + EL +
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIKA 520
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 107/184 (58%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ VTYNT+I G CK V+ LF +M + + D TYN+LIHG C A N A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
++F M+D GV P +VT+N+++D LC NGK+++A +++ + + ++ + TY+ ++ G
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C T K+ A LF S+ G K D ++Y +I+G C+ EA L R M G P+
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 192 VTYN 195
Y+
Sbjct: 500 RIYD 503
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 237 bits (605), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 187/315 (59%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN V YNT+IDGLCK G ++ A L +M+ + + DVVTYN+L+ GLC++ W++A R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ +MM + + P VVTF ++D K G +DEA L M+Q V PN TY+++++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ G++ A++ F M S GC + V+YN LI+G+CK + V+E + L++ M +G +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G ++ ++ AL +F M V D T+ + GLC NG I A+ F +
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ + I AYN +I GLCK+ ++E A ELF LP + D TY IMI GLC +G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 313 DKAHDLFLDMEENAV 327
+A +L M+E +
Sbjct: 473 READELIRRMKEEGI 487
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 192/351 (54%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT+ +++ G C + A +L + M P+VV YN+LI GLC + N A
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L EM +G+ VVT+N ++ LC +G+ +A+R+L M++R + P+ T++ L+D F
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G ++ A+EL+ M ++V+YN +ING C + + +A + M SKG P VV
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G + V+ +KLF+ M + AD TYNT I G C+ G + A+++F +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ DI + L+ GLC +G +E AL F + +V YNIMIHGLC ++
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVM 363
+KA +LF + V P+ + +I G + + EL+ +MKE+ ++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 193/356 (54%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
++ +I C+ + A ++ +M P +VT+ SL+HG C N +A L M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 78 MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
+ G +P+VV +N ++D LCKNG+++ A LL+ M ++ + + TY+TL+ G C +G+
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
+ A + M D V++ LI+ + K ++EA LY+EM+ + P VTYN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
GL ++ A K F+ M + TYNT I G CK + E ++LF+ +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
DI YN LI G C+ G+L +AL++F + R + D++T+ I++HGLC +G+++ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
F DM E+ ++ + +IHG + +K K EL ++ + V PDA ++++
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 162/301 (53%)
Query: 41 QMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNG 100
+M+ I+ D+ ++ LIH C + + A + +MM G +PS+VTF ++ C
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
++ +A L+ LMV+ PN Y+TL+DG C G++N A EL ME G D V+YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
L+ G C + +A + R+M+ + I P VVT+ L + ++ A +L++EM +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
V + TYN+ I+GLC +G + +A + F + C ++ YN LI G CK ++
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
++LF+ + AD+ TYN +IHG C G++ A D+F M V P++I L+HG
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 341 F 341
Sbjct: 396 L 396
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 161/333 (48%)
Query: 33 DKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVI 92
+ A ALF +M P +V + L+ + + +M G+ + +F ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 93 MDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
+ C+ ++ A +L M++ P+ T+ +L+ GFCL +I A L M G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
+ + V YN LI+G CKN E+ AL L EM KG+ VVTYNTL GL + A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 213 LFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC 272
+ +M + + D T+ ID K G + EA EL++ + + + YN +I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
GRL A + F + + +VVTYN +I G C +D+ LF M ++
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ TLIHG+ ++ K +++ M ++V PD
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 93/176 (52%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN VTYNT+I G CK VD+ LF +M E N D+ TYN+LIHG C A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+F M+ + V P ++T +++ LC NG+++ A D M + + Y+ ++ G
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
C K+ +A ELF + G K D +Y I+I G CKN EA L R M +GI
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 70/306 (22%)
Query: 60 GLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRP 119
G H+ + +A LFFEM+ PS+V F +RLL
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDF----------------TRLLT------ATA 82
Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
N Y T++ ME G HD S+ ILI+ +C+ + ALS+
Sbjct: 83 NLRRYETVI-------------YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
+M+ G +P++VT+ +L G ++++ A L M K+
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM-------------------VKS 170
Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
GY E ++ YN LIDGLCK+G L IALEL + ++ L ADVVTY
Sbjct: 171 GY----------------EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
N ++ GLC G+ A + DM + ++ P+V+ F LI FV+ + EL +M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 360 KKVMPD 365
V P+
Sbjct: 275 SSVDPN 280
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%)
Query: 162 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD 221
L G+ + E+A +L+ EMV P++V + L + + E + ++M+
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 222 VAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIAL 281
++ D ++ I C+ + A+ + + L E I + L+ G C R+ A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 282 ELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGF 341
L + + +VV YN +I GLC +G+++ A +L +ME+ + +V+ + TL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 342 VRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ S +L M ++ + PD + ++D+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 232 bits (591), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 196/367 (53%), Gaps = 3/367 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PNTVTYNT+I LCKE V++A L + + I PDV T+NSLI GLC + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM +G +P T+N+++D LC GK+DEA +L M + TY+TL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C K AEE+F ME G + V+YN LI+G CK++ VE+A L +M+ +G KP
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
TYN+L ++ A + + M + D TY T I GLCK G + A +L R+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRS-LPRRVLVADVVTYNIMIHGLCN-D 309
+ + L AYN +I GL + + A+ LFR L + D V+Y I+ GLCN
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
G + +A D +++ E P L G + ++ +++L++ + +K + V
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE-V 719
Query: 370 SMVVDLL 376
SMV LL
Sbjct: 720 SMVKGLL 726
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 202/360 (56%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ T+NT+++GLCK G V A + M E +PDV TYNS+I GLC + EA +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M+ + P+ VT+N ++ LCK +++EA+ L ++ + + P+ T+++L+ G CL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
T A ELF M S GC+ D+ +YN+LI+ C +++EAL++ ++M G +V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNTL G + ++ A ++F+EM+ V+ ++ TYNT IDGLCK+ + +A +L +
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ + D YN L+ C+ G ++ A ++ +++ D+VTY +I GLC G+++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A L ++ + + +I G R K ++ I L +M E+ P ++ +V
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 180/352 (51%), Gaps = 1/352 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
C + V+ N I+ G CKEG V+ A +M ++ PD T+N+L++GLC A A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
+ M+ +G P V T+N ++ LCK G++ EA +LD M+ RD PN TY+TL+
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
C ++ A EL + S G D ++N LI G C + A+ L+ EM SKG +P
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
TYN L L +++ AL + ++M+ A TYNT IDG CK EA E+F
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
+ + + YN LIDGLCKS R+E A +L + D TYN ++ C G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
+ KA D+ M N P+++ + TLI G + + +LL ++ K +
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 179/353 (50%), Gaps = 1/353 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ T+ T++ G +EG +D A + QM + V+ N ++HG C +A
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 74 FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
EM +Q G P TFN +++ LCK G + A ++D+M+Q P+ +TY++++ G C
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G++ A E+ M + C + V+YN LI+ CK +VEEA L R + SKGI P V
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N+L GL A++LFEEM+ D TYN ID LC G + EA+ + + +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ C + YN LIDG CK+ + A E+F + + + VTYN +I GLC ++
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ A L M P+ + +L+ F R K +++ M PD
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 192/368 (52%), Gaps = 7/368 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+T YN +++ L + + +M I PDV T+N LI LC A+ A
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ +M G+ P TF +M + G +D A R+ + MV+ + + + ++ GFC
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 133 LTGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
G++ A M + G D ++N L+NG CK V+ A+ + M+ +G P V
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
TYN++ GL ++ +V+ A+++ ++M D + +T TYNT I LCK + EA EL R
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 252 L---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
L GIL D+ +N LI GLC + +A+ELF + + D TYN++I LC+
Sbjct: 391 LTSKGILP---DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASI 368
G++D+A ++ ME + A +VI + TLI GF + NK + E+ +M+ V ++
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 369 VSMVVDLL 376
+ ++D L
Sbjct: 508 YNTLIDGL 515
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 2/365 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P Y I+ L + G D K + MK T+ LI +E +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 74 FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
M+D+ G++P +N +++ L + M ++P+ T++ L+ C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
++ A + M S G D+ ++ ++ GY + +++ AL + +MV G + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQ-RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
+ N + G + +VE AL +EM +D D T+NT ++GLCK G++ A+E+
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ + D+ YN +I GLCK G ++ A+E+ + R + VTYN +I LC + Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+++A +L + + P+V F +LI G +EL +M+ K PD +M
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 372 VVDLL 376
++D L
Sbjct: 441 LIDSL 445
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 231 bits (588), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 191/360 (53%), Gaps = 3/360 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ + T+I G C+ G KA + ++G PDV+TYN +I G C A + N A +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M V P VVT+N I+ LC +GK+ +A +LD M+QRD P+ TY+ L++ C
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+ A +L M GC D V+YN+L+NG CK ++EA+ +M S G +P V+T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+N + + + A KL +M R + T+N I+ LC+ G + A+++ +
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C+ + +YN L+ G CK +++ A+E + R D+VTYN M+ LC DG+++
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A ++ + +P +I + T+I G + K K I+LL +M+ K + PD S +V
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Score = 222 bits (565), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 194/356 (54%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ +TY +I+ C++ V A L +M+ PDVVTYN L++G+C +EA
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+ +M G QP+V+T N+I+ +C G+ +A +LL M+++ P+ T++ L++
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C G + RA ++ M GC+ + +SYN L++G+CK K+++ A+ MVS+G P +
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
VTYNT+ L + +VE A+++ ++ + TYNT IDGL K G +A++L
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ + D Y+ L+ GL + G+++ A++ F R + + VT+N ++ GLC Q
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
D+A D + M PN + LI G + +ELL+++ K +M +S
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 195/363 (53%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ VTYNTI+ LC G + +A + +M + PDV+TY LI C + A +L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM D+G P VVT+NV+++ +CK G++DEA + L+ M +PN T++ ++ C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
TG+ AE+L M G V++NILIN C+ + A+ + +M G +P ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN L G + +++ A++ E M D TYNT + LCK+G + +AVE+ L
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C + YN +IDGL K+G+ A++L + + L D +TY+ ++ GL +G++D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A F + E + PN + F +++ G + + + I+ L M + P+ + ++++
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 374 DLL 376
+ L
Sbjct: 562 EGL 564
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 187/353 (52%), Gaps = 3/353 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ +TYN +I G CK G ++ A ++ +M +++PDVVTYN+++ LC + +A +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M+ + P V+T+ ++++ C++ + A +LLD M R P+ TY+ L++G C
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G+++ A + M S GC+ + +++NI++ C +A L +M+ KG P+VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+N L L + A+ + E+M + ++ +YN + G CK + A+E +
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C DI YN ++ LCK G++E A+E+ L + ++TYN +I GL G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
KA L +M + P+ I + +L+ G R K + I+ H+ + + P+A
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 158/314 (50%), Gaps = 3/314 (0%)
Query: 52 VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDL 111
V N+ + + + E + M+ G P ++ ++ C+ GK +A+++L++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 112 MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
+ P+ TY+ ++ G+C G+IN A ++ M D V+YN ++ C + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
+++A+ + M+ + P V+TY L V HA+KL +EM+ D TYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
++G+CK G + EA++ + C+ ++ +N ++ +C +GR A +L + R+
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
VVT+NI+I+ LC G + +A D+ M ++ PN + + L+HGF + K + I
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 352 ELLHKMKEKKVMPD 365
E L +M + PD
Sbjct: 400 EYLERMVSRGCYPD 413
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 150/280 (53%), Gaps = 3/280 (1%)
Query: 87 VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
V N + ++ + G+++E + L+ MV P+ +TL+ GFC GK +A ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
+E G D ++YN++I+GYCK E+ ALS+ M + P VVTYNT+ L + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
++ A+++ + M + D D TY I+ C++ + A++L + C D+ YN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
L++G+CK GRL+ A++ +P +V+T+NI++ +C+ G+ A L DM
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
+P+V+ F LI+ R + I++L KM + P++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 6/239 (2%)
Query: 141 EELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
EE F +E+M G D + LI G+C+ + +A + + G P V+TYN +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
G + ++ +AL + + M V+ D TYNT + LC +G + +A+E+ + C
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
D+ Y LI+ C+ + A++L + R DVVTYN++++G+C +G++D+A
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
DM + PNVI ++ + +LL M K P +++++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
+DV N + + E+EE MV G P ++ TL G + + A K+
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
E ++ D TYN I G CK G I A+ + + + D+ YN ++ LC S
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDS 217
Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
G+L+ A+E+ + +R DV+TY I+I C D + A L +M + P+V+ +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
L++G + + + I+ L+ M P+
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 203/364 (55%), Gaps = 5/364 (1%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ +TY +++GLCK G VD AK LF ++ P++V +N+LIHG ++AK +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 74 FFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+M+ G+ P V T+N ++ K G + A +L M + +PN ++Y+ L+DGFC
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GKI+ A + M + G K + V +N LI+ +CK + EA+ ++REM KG KP V
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N+L GL E+ +++HAL L +M + V A+T TYNT I+ + G I EA +L +
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
LD YN LI GLC++G ++ A LF + R ++ NI+I+GLC G +
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
++A + +M P+++ F +LI+G R + + + K++ + + PD + +
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 373 VDLL 376
+ L
Sbjct: 676 MSWL 679
Score = 201 bits (511), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 187/368 (50%), Gaps = 36/368 (9%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNE 69
+ KP V +NT+I G G +D AKA+ M I PDV TYNSLI+G
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A + +M ++G +P+V ++ +++D CK GK+DEA +L+ M ++PN ++ L+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
FC +I A E+F M GCK D ++N LI+G C+ E++ AL L R+M+S+G+
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 190 TVVTYNTL---FL--------------------------------GLFEIHQVEHALKLF 214
VTYNTL FL GL +V+ A LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
E+M RD A + N I+GLC++G + EAVE + + + DI +N LI+GLC++
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
GR+E L +FR L + D VT+N ++ LC G + A L + E+ PN +
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 335 VTLIHGFV 342
L+ +
Sbjct: 708 SILLQSII 715
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 157/303 (51%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
CKPN +Y ++DG CK G +D+A + +M + + P+ V +N LI C + EA
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+F EM +G +P V TFN ++ LC+ ++ A LL M+ V N TY+TL++ F
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
G+I A +L M G D+++YN LI G C+ EV++A SL+ +M+ G P+
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
++ N L GL VE A++ +EM D T+N+ I+GLC+ G I + + +FR
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
L D +N L+ LCK G + A L V + T++I++ +
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Query: 312 MDK 314
+D+
Sbjct: 720 LDR 722
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 171/343 (49%), Gaps = 12/343 (3%)
Query: 28 KEGFVDKAKALFLQMKG-ENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
K GF + L L+M+ + P +YN ++ L N A +F++M+ + + P++
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL 217
Query: 87 VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
TF V+M C ++D A LL M + PN+ Y TL+ ++N A +L
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
M MGC D ++N +I G CK + EA + M+ +G P +TY L GL +I +
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA----VELFRTLGILKCELDIQ 262
V+ A LF + + ++ +NT I G +G + +A ++ + GI+ D+
Sbjct: 338 VDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP---DVC 390
Query: 263 AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDM 322
YN LI G K G + +ALE+ + + +V +Y I++ G C G++D+A+++ +M
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 323 EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ + PN + F LI F + ++ + +E+ +M K PD
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 175/364 (48%), Gaps = 5/364 (1%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P +YN +++ L A +F M I P + T+ ++ C N+ + A
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
L +M G P+ V + ++ L K +++EA +LL+ M P+A T++ ++ G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C +IN A ++ M G DD++Y L+NG CK V+ A L+ + KP +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEI 353
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
V +NTL G +++ A + +M + D TYN+ I G K G + A+E+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
+ C+ ++ +Y L+DG CK G+++ A + + L + V +N +I C +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
++ +A ++F +M P+V F +LI G +++ + LL M + V+ + +
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 371 MVVD 374
+++
Sbjct: 534 TLIN 537
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 8/324 (2%)
Query: 54 YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRL-LDLM 112
Y LI L ++ RL +M D+G+ F IM + K G + +RL L++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINR-AEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
P +Y+ +++ ++G ++ A +F M S ++ +++ +C E
Sbjct: 174 NVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 172 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
++ ALSL R+M G P V Y TL L + ++V AL+L EEM D T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
I GLCK I EA ++ + I D Y L++GLCK GR++ A +LF +P+
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350
Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDM-EENAVAPNVIIFVTLIHGFVRINKPSKV 350
++V +N +IHG G++D A + DM + P+V + +LI+G+ +
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 351 IELLHKMKEKKVMPDASIVSMVVD 374
+E+LH M+ K P+ +++VD
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVD 432
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 37/79 (46%)
Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
+YN+++ L + A ++F DM + P + F ++ F +N+ + LL M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 358 KEKKVMPDASIVSMVVDLL 376
+ +P++ I ++ L
Sbjct: 244 TKHGCVPNSVIYQTLIHSL 262
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 221 bits (563), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 185/323 (57%), Gaps = 1/323 (0%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+G+ +PN V YNTIID LC++G V+ A + MK I PDVVTYNSLI L H+ W
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
+ R+ +MM G+ P V+TF+ ++D K G++ EA + + M+QR V PN TY++L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++G C+ G ++ A+++ + S G + V+YN LINGYCK K V++ + + M G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
TYNTL+ G + + A K+ M V D T+N +DGLC +G I +A+
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L K + I YN +I GLCK+ ++E A LF SL + + DV+TY M+ GL
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 308 NDGQMDKAHDLFLDME-ENAVAP 329
+AH+L+ M+ E+ + P
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMP 498
Score = 201 bits (510), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 187/353 (52%), Gaps = 1/353 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT+ ++++G C +A +L Q+ G P+VV YN++I LC N A
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ M G++P VVT+N ++ L +G ++R+L M++ + P+ T+S L+D +
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G++ A++ + M + V+YN LING C + ++EA + +VSKG P V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL G + +V+ +K+ M RD V DT TYNT G C+ G A ++ +
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
D+ +N L+DGLC G++ AL L + V ++TYNI+I GLC ++
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM-KEKKVMP 364
+ A LF + V+P+VI ++T++ G R + EL KM KE +MP
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%)
Query: 35 AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMD 94
A LF M + P +V ++ L+ + N + LF + G+ + +F ++D
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 95 ELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
C+ ++ A L M++ P+ T+ +L++GFC + A L + +G +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
+ V YN +I+ C+ +V AL + + M GI+P VVTYN+L LF + ++
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
+M R ++ D T++ ID K G ++EA + + + +I YN LI+GLC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 275 GRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIF 334
G L+ A ++ L + + VTYN +I+G C ++D + M + V + +
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 335 VTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
TL G+ + K S ++L +M V PD ++++D
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 168/353 (47%), Gaps = 8/353 (2%)
Query: 22 IIDGLCKEGFVDK--------AKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
I+ L +GF+ + AL L++ Y + H+ +N+A L
Sbjct: 7 IVIALTAKGFLHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTL 66
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F +M + PS+V F+ ++ + K K + L + + + ++++TL+D FC
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+++ A G M +G + V++ L+NG+C EA+SL ++V G +P VV
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNT+ L E QV AL + + M++ + D TYN+ I L +G + + +
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ D+ ++ LID K G+L A + + + +R + ++VTYN +I+GLC G +D
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
+A + + PN + + TLI+G+ + + +++L M V D
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 221 bits (563), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 194/352 (55%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ VTYNT+I +G +++A L M G+ +P V TYN++I+GLC + AK +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F EM+ G+ P T+ ++ E CK G + E ++ M RDV P+ +S++M F
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+G +++A F S++ G D+V Y ILI GYC+ + A++L EM+ +G VVT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNT+ GL + + A KLF EM + D+ T IDG CK G + A+ELF+ +
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ LD+ YN L+DG K G ++ A E++ + + ++ ++Y+I+++ LC+ G +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+A ++ +M + P V+I ++I G+ R S L KM + +PD
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 194/398 (48%), Gaps = 37/398 (9%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P TYNT+I+GLCK G ++AK +F +M ++PD TY SL+ C D E +++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F +M + V P +V F+ +M ++G +D+A + + + + P+ Y+ L+ G+C
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYN--------------------------------- 160
G I+ A L M GC D V+YN
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 161 --ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
ILI+G+CK ++ A+ L+++M K I+ VVTYNTL G ++ ++ A +++ +M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
++ +Y+ ++ LC G++ EA ++ + + + N +I G C+SG
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEE--NAVAPNVIIFVT 336
+ V D ++YN +I+G + M KA L MEE + P+V + +
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
++HGF R N+ + +L KM E+ V PD S + +++
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 178/359 (49%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N T N +++ LCK+G ++K Q++ + + PD+VTYN+LI EA L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
M +G P V T+N +++ LCK+GK + A + M++ + P++ TY +L+ C
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G + E++F M S D V ++ +++ + ++ +++AL + + G+ P V Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
L G + A+ L EM + A D TYNT + GLCK + EA +LF +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
D LIDG CK G L+ A+ELF+ + + + DVVTYN ++ G G +D
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A +++ DM + P I + L++ ++ + +M K + P I + ++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 176/357 (49%)
Query: 20 NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
N +I L + G+V+ A ++ ++ + +V T N +++ LC + ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 80 QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINR 139
+GV P +VT+N ++ G M+EA L++ M + P +TY+T+++G C GK R
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 140 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 199
A+E+F M G D +Y L+ CK +V E ++ +M S+ + P +V ++++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 200 GLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCEL 259
++ AL F ++ + D Y I G C+ G I A+ L + C +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 260 DIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLF 319
D+ YN ++ GLCK L A +LF + R L D T I+I G C G + A +LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 320 LDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
M+E + +V+ + TL+ GF ++ E+ M K+++P S++V+ L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 177/354 (50%), Gaps = 2/354 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ V +++++ + G +DKA F +K + PD V Y LI G C + A L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM+ QG VVT+N I+ LCK + EA +L + M +R + P+++T + L+DG C
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G + A ELF M+ + D V+YN L++G+ K +++ A ++ +MVSK I PT ++
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y+ L L + A ++++EM ++ N+ I G C++G + +
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV--LVADVVTYNIMIHGLCNDGQ 311
D +YN LI G + + A L + + LV DV TYN ++HG C Q
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
M +A + M E V P+ + +I+GFV + ++ + +M ++ PD
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 179/364 (49%), Gaps = 2/364 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-A 70
C N ++ +I + + +A F ++ + + N+LI L W E A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG-WVELA 219
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
++ E+ GV +V T N++++ LCK+GKM++ L + ++ V P+ TY+TL+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
+ G + A EL +M G +YN +ING CK+ + E A ++ EM+ G+ P
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
TY +L + + V K+F +M+ DV D +++ + ++G + +A+ F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
++ D Y LI G C+ G + +A+ L + ++ DVVTYN ++HGLC
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
+ +A LF +M E A+ P+ LI G ++ +EL KMKEK++ D +
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 371 MVVD 374
++D
Sbjct: 520 TLLD 523
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C + VTYNTI+ GLCK + +A LF +M + PD T LI G C + A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF +M ++ ++ VVT+N ++D K G +D A + MV +++ P +YS L++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C G + A ++ M S K + N +I GYC++ + S +M+S+G P
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDD--VAADTSTYNTFIDGLCKNGYIVEAVELF 249
++YNTL G + A L ++M+ + + D TYN+ + G C+ + EA +
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
R + D Y C+I+G L A + + +R D
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP + N++I G C+ G ++ +M E PD ++YN+LI+G + ++A
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 73 LFFEMMDQ--GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
L +M ++ G+ P V T+N I+ C+ +M EA +L M++R V P+ TY+ +++G
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 131 FCLTGKINRAEELFGSMESMGCKHDD 156
F + A + M G DD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 170/268 (63%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+ N V Y+T+ID LCK D A LF +M+ + + P+V+TY+SLI LC+ W++A R
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M+++ + P++VTF+ ++D K GK+ +A +L + M++R + PN FTYS+L++GFC
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ ++ A+++ M C + V+YN LING+CK K V++ + L+REM +G+ V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY TL G F+ ++A +F++M V + TYN +DGLCKNG + +A+ +F L
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIA 280
E DI YN +I+G+CK+G+ ++
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 174/300 (58%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ VTY +++GLCK G D A L +M+ I +VV Y+++I LC ++A
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM ++GV+P+V+T++ ++ LC G+ +ASRLL M++R + PN T+S L+D F
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
GK+ +AE+L+ M + +Y+ LING+C + EA + M+ K P V
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
VTYNTL G + +V+ ++LF EM + + +T TY T I G + A +F+
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ + +I YN L+DGLCK+G+L A+ +F L R + D+ TYNIMI G+C G+
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 189/362 (52%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ VT N++++G C + A AL QM PD VT+ +LIHGL N +EA
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L M+ +G QP +VT+ +++ LCK G D A LL+ M + N YST++D C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ A LF ME+ G + + ++Y+ LI+ C +A L +M+ + I P +V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T++ L + ++ A KL+EEM + + + TY++ I+G C + EA ++ +
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
C ++ YN LI+G CK+ R++ +ELFR + +R LV + VTY +IHG
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D A +F M V PN++ + L+ G + K +K + + ++ + PD +++
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 373 VD 374
++
Sbjct: 505 IE 506
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 194/362 (53%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N TYN +I+ C+ + A AL +M PD+VT NSL++G CH N ++A L
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M++ G +P VTF ++ L + K EA L+D MVQR +P+ TY +++G C
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G + A L ME+ + + V Y+ +I+ CK + ++AL+L+ EM +KG++P V+TY
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
++L L + A +L +M + + T++ ID K G +V+A +L+ +
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
+ +I Y+ LI+G C RL A ++ + R+ + +VVTYN +I+G C ++DK
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+LF +M + + N + + TLIHGF + + +M V P+ ++++D
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 375 LL 376
L
Sbjct: 472 GL 473
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 158/309 (51%)
Query: 66 DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
+ ++A LF M PS++ F+ ++ + K K D + M + N +TY+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
L++ FC +++ A L G M +G + D V+ N L+NG+C + +A++L +MV
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
G KP VT+ TL GLF ++ A+ L + M + D TY ++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
+ L + K E ++ Y+ +ID LCK + AL LF + + + +V+TY+ +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
LCN G+ A L DM E + PN++ F LI FV+ K K +L +M ++ + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 366 ASIVSMVVD 374
S +++
Sbjct: 358 IFTYSSLIN 366
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 171/334 (51%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+D A LF M P ++ ++ L+ + N ++ +M G+ ++ T+N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+++ C+ ++ A LL M++ P+ T ++L++GFC +I+ A L M MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
K D V++ LI+G + + EA++L MV +G +P +VTY + GL + + AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L +M+ + A+ Y+T ID LCK + +A+ LF + ++ Y+ LI L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
C GR A L + R + ++VT++ +I G++ KA L+ +M + ++ PN+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+ +LI+GF +++ + ++L M K +P+
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 35/276 (12%)
Query: 101 KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYN 160
++D+A L +M Q P+ +S L+ K + ME +G H+ +YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 161 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD 220
ILIN +C+ + AL+L +M+ G +P +VT N+L G +++ A+ L ++M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
DT T+ T I GL + EAV LID + + G
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAV-------------------ALIDRMVQRG----- 213
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
D+VTY +++GLC G D A +L ME + NV+I+ T+I
Sbjct: 214 -----------CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ + L +M+ K V P+ S ++ L
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+ V PN +TYN ++DGLCK G + KA +F ++ + PD+ TYN +I G+C A W
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 218 bits (556), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 199/359 (55%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN V Y T+IDG CK+G ++KAK LF +M + + TY LI+GL + +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+ +M + GV P++ T+N +M++LCK+G+ +A ++ D M +R V N TY+TL+ G C
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K+N A ++ M+S G + ++YN LI+G+C ++ +ALSL R++ S+G+ P++VT
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN L G A K+ +EM+ + TY ID ++ + +A++L ++
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
L D+ Y+ LI G C G++ A LF+S+ + + V YN MI G C +G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A L +MEE +APNV + +I + K + L+ KM + + P SI+S++
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 195/359 (54%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
++ +I G C+ G ++K+ L +++ +P+VV Y +LI G C + +AK LFFEM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 78 MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
G+ + T+ V+++ L KNG + + + M + V PN +TY+ +M+ C G+
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
A ++F M G + V+YN LI G C+ ++ EA + +M S GI P ++TYNTL
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
G + ++ AL L +++ ++ TYN + G C+ G A ++ + +
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
+ Y LID +S +E A++L S+ LV DV TY+++IHG C GQM++A
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
LF M E PN +I+ T+I G+ + + ++LL +M+EK++ P+ + ++++L
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 168/353 (47%), Gaps = 1/353 (0%)
Query: 22 IIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQG 81
+I G F + L + E Y +I+ + N + F EM+D G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 82 VQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAE 141
P FN ++ + + ++ + + V + +++ L+ G C G+I ++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 142 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 201
+L + G + V Y LI+G CK E+E+A L+ EM G+ TY L GL
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 202 FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDI 261
F+ + +++E+MQ D V + TYN ++ LCK+G +A ++F + +I
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 262 QAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD 321
YN LI GLC+ +L A ++ + + +++TYN +I G C G++ KA L D
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 322 MEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
++ ++P+++ + L+ GF R S +++ +M+E+ + P ++++D
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+ VTY +ID + ++KA L L M+ + PDV TY+ LIHG C NEA R
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF M+++ +P+ V +N ++ CK G A +LL M ++++ PN +Y +++ C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 133 LTGKINRAEELFGSM 147
K AE L M
Sbjct: 525 KERKSKEAERLVEKM 539
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
Y ++IN Y +++ + ++S + EMV G P +N L
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLL-------------------- 136
Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
+S++N + +N K LD+ ++ LI G C++G +E
Sbjct: 137 --TFVVGSSSFNQWWSFFNENKS--------------KVVLDVYSFGILIKGCCEAGEIE 180
Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
+ +L L +VV Y +I G C G+++KA DLF +M + + N + LI
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+G + + E+ KM+E V P+ + V++ L
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+PN V YNT+I G CKEG +A L +M+ + + P+V +Y +I LC EA+
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 72 RLFFEMMDQGVQPSVVTFNVI 92
RL +M+D G+ PS ++I
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 193/354 (54%), Gaps = 1/354 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ TY ++IDGLC EG ++A ALF + G+ I P+V+ YN+LI GL + EA +L
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM ++G+ P V TFN++++ LCK G + +A L+ +M+ + P+ FT++ L+ G+
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K+ A E+ M G D +YN L+NG CK + E+ + Y+ MV KG P + T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+N L L +++ AL L EEM+ V D T+ T IDG CKNG + A LFR +
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 254 -ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
K YN +I + + +A +LF+ + R L D TY +M+ G C G +
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
+ + L+M EN P++ +I+ ++ + ++H+M +K ++P+A
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 201 bits (512), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 199/397 (50%), Gaps = 36/397 (9%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN TYN I GLC+ G +D A + + + PDV+TYN+LI+GLC + + EA+
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M+++G++P T+N ++ CK G + A R++ V P+ FTY +L+DG C
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 134 TGKINRAEELFGSMESMGCKHDDV-----------------------------------S 158
G+ NRA LF G K + + +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
+NIL+NG CK V +A L + M+SKG P + T+N L G ++E+AL++ + M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
+ V D TYN+ ++GLCK + +E ++T+ C ++ +N L++ LC+ +L+
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNVIIFVTL 337
AL L + + + D VT+ +I G C +G +D A+ LF MEE V+ + + +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
IH F + +L +M ++ + PD ++VD
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 191/398 (47%), Gaps = 35/398 (8%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+ N V Y T++ G +E F + LF +M ++ + T+N L+ LC D E +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+L +++ +GV P++ T+N+ + LC+ G++D A R++ ++++ +P+ TY+ L+ G
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---------------------- 169
C K AE G M + G + D +YN LI GYCK
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 170 -------------KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
E AL+L+ E + KGIKP V+ YNTL GL + A +L E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
M + + T+N ++GLCK G + +A L + + DI +N LI G +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
+E ALE+ + + DV TYN +++GLC + + + + M E APN+ F
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
L+ R K + + LL +MK K V PDA ++D
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 188/365 (51%), Gaps = 1/365 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P++ TYNT+I G CK G V A+ + PD TY SLI GLCH + N A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF E + +G++P+V+ +N ++ L G + EA++L + M ++ + P T++ L++G C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G ++ A+ L M S G D ++NILI+GY ++E AL + M+ G+ P V
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYN+L GL + + E ++ ++ M A + T+N ++ LC+ + EA+ L +
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV-TYNIMIHGLCNDGQ 311
D + LIDG CK+G L+ A LFR + V+ TYNI+IH
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+ A LF +M + + P+ + ++ GF + + + L +M E +P + +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 372 VVDLL 376
V++ L
Sbjct: 678 VINCL 682
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 35/389 (8%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDV-------------------- 51
C+P +YN I+ L G+ D+A ++++M+ I PDV
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 52 ---------------VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
V Y +++ G N E LF +M+ GV + TFN ++ L
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 97 CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
CK G + E +LLD +++R V PN FTY+ + G C G+++ A + G + G K D
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
++YN LI G CKN + +EA +MV++G++P TYNTL G + V+ A ++ +
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
+ D TY + IDGLC G A+ LF + ++ YN LI GL G
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
+ A +L + + L+ +V T+NI+++GLC G + A L M P++ F
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPD 365
LIHG+ K +E+L M + V PD
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPD 495
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 173/330 (52%), Gaps = 3/330 (0%)
Query: 5 NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
N +G KPN + YNT+I GL +G + +A L +M + + P+V T+N L++GLC
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 65 NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
++A L M+ +G P + TFN+++ KM+ A +LD+M+ V P+ +TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
++L++G C T K E + +M GC + ++NIL+ C+ ++++EAL L EM +
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIV 243
K + P VT+ TL G + ++ A LF +M+ V++ T TYN I + +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 244 EAVELFRTLGILKC-ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
A +LF+ + + +C D Y ++DG CK+G + + + + + + T +
Sbjct: 620 MAEKLFQEM-VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
I+ LC + ++ +A + M + + P +
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 38/396 (9%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVV--TYNSLIHGLCHANDWNEAKRLFF 75
TY ++I+ L G + + + + M+ EN+ ++ Y + EA +F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 76 EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTG 135
M +P+V ++N IM L +G D+A ++ M R + P+ ++++ M FC T
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS 160
Query: 136 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 195
+ + A L +M S GC+ + V+Y ++ G+ + E L+ +M++ G+ + T+N
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFN 220
Query: 196 TLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL--- 252
L L + V+ KL +++ + V + TYN FI GLC+ G + AV + L
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 253 --------------GILK------------------CELDIQAYNCLIDGLCKSGRLEIA 280
G+ K E D YN LI G CK G +++A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 281 LELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
+ V D TY +I GLC++G+ ++A LF + + PNVI++ TLI G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 341 FVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ +L ++M EK ++P+ +++V+ L
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 217 bits (553), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 196/398 (49%), Gaps = 35/398 (8%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN--- 68
C N V YN +IDGLCK+ V +A + + G+++ PDVVTY +L++GLC ++
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 69 --------------------------------EAKRLFFEMMDQGVQPSVVTFNVIMDEL 96
EA L ++D GV P++ +N ++D L
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 97 CKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
CK K EA L D M + +RPN TYS L+D FC GK++ A G M G K
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEE 216
YN LING+CK ++ A EM++K ++PTVVTY +L G ++ AL+L+ E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
M +A T+ T + GL + G I +AV+LF + + + YN +I+G C+ G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 277 LEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVT 336
+ A E + + + +V D +Y +IHGLC GQ +A + + N I +
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 337 LIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
L+HGF R K + + + +M ++ V D +++D
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 70/423 (16%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P VTY +++ G C +G ++KA L+ +M G+ I P + T+ +L+ GL A +A +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF EM + V+P+ VT+NV+++ C+ G M +A L M ++ + P+ ++Y L+ G C
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
LTG+ + A+ + C+ +++ Y L++G+C+ ++EEALS+ +EMV +G+ +V
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 193 TYNTL------------FLGLF-EIHQ----------------------VEHALKLFEEM 217
Y L F GL E+H + A +++ M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG-----------------ILKCELD 260
+ + TY I+GLCK G++ EA L + + K E+D
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 261 IQ------------------AYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
+Q YN LI G C+ GR+E A EL + + D +TY M
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
I+ LC + KA +L+ M E + P+ + + TLIHG + K EL ++M + +
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 363 MPD 365
+P+
Sbjct: 889 IPN 891
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 2/371 (0%)
Query: 6 GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
G+IG+ +PN VTY+ +ID C+ G +D A + +M + V YNSLI+G C
Sbjct: 394 GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 66 DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
D + A+ EM+++ ++P+VVT+ +M C GK+++A RL M + + P+ +T++
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
TL+ G G I A +LF M K + V+YN++I GYC+ ++ +A +EM K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
GI P +Y L GL Q A + + + + + Y + G C+ G + EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
+ + + + +LD+ Y LIDG K ++ L + + R L D V Y MI
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
G +A ++ M PN + + +I+G + ++ L KM+ +P+
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 366 ASIVSMVVDLL 376
+D+L
Sbjct: 752 QVTYGCFLDIL 762
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 174/361 (48%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P T + ++ GL K A LF M I PDV Y +I LC D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M G ++V +NV++D LCK K+ EA + + +D++P+ TY TL+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+ E+ M + + + + L+ G K ++EEAL+L + +V G+ P +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN L L + + A LF+ M + + + TY+ ID C+ G + A+ +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+L + YN LI+G CK G + A + + L VVTY ++ G C+ G+++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
KA L+ +M +AP++ F TL+ G R ++L ++M E V P+ ++++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 374 D 374
+
Sbjct: 550 E 550
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 150/289 (51%), Gaps = 10/289 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+ N + Y ++ G C+EG +++A ++ +M ++ D+V Y LI G D +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD----R 663
Query: 72 RLFF----EMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
+LFF EM D+G++P V + ++D K G EA + DLM+ PN TY+ +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKG 186
++G C G +N AE L M+ + + V+Y ++ K + ++++A+ L+ ++ KG
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KG 782
Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
+ TYN L G ++E A +L M D V+ D TY T I+ LC+ + +A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
EL+ ++ D AYN LI G C +G + A EL + R+ L+ +
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+ V Y ++ID K G +A ++ M E P+ VTY ++I+GLC A NEA+
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMD-EASRLLDLMVQRDVRPNAFTYSTLMDGF 131
L +M P+ VT+ +D L K G++D + + L + + + N TY+ L+ GF
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C G+I A EL M G D ++Y +IN C+ +V++A+ L+ M KGI+P
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNT 231
V YNTL G ++ A +L EM R + + T T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 159 YNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
+++LI Y +++ V + + +++ M++K + P V T + L GL + A++LF +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
+ D Y I LC+ + A E+ + C+++I YN LIDGLCK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
A+ + + L + L DVVTY +++GLC + + ++ +M +P+ +L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ G + K + + L+ ++ + V P+ + + ++D L
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
IG P+ +TY T+I+ LC+ V KA L+ M + I PD V YN+LIHG C A +
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 68 NEAKRLFFEMMDQGVQPS 85
+A L EM+ QG+ P+
Sbjct: 874 GKATELRNEMLRQGLIPN 891
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 186/360 (51%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ ++Y+T+++G C+ G +DK L MK + + P+ Y S+I LC EA+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F EM+ QG+ P V + ++D CK G + AS+ M RD+ P+ TY+ ++ GFC
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G + A +LF M G + D V++ LINGYCK +++A ++ M+ G P VVT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y TL GL + ++ A +L EM + + + TYN+ ++GLCK+G I EAV+L
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
D Y L+D CKSG ++ A E+ + + + L +VT+N++++G C G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
L M +APN F +L+ + N + M + V PD +V
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+TV Y T+IDG CK G + A F +M +I PDV+TY ++I G C D EA +L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F EM +G++P VTF +++ CK G M +A R+ + M+Q PN TY+TL+DG C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G ++ A EL M +G + + +YN ++NG CK+ +EEA+ L E + G+ VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y TL + +++ A ++ +EM + T+N ++G C +G + + +L +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ +N L+ C L+ A +++ + R + D TY ++ G C M
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A LF +M+ + +V + LI GF++ K + E+ +M+ + + D I
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Query: 374 D 374
D
Sbjct: 709 D 709
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 198/367 (53%), Gaps = 2/367 (0%)
Query: 7 EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
E+GV N +YN +I +C+ G + +A L L M+ + PDV++Y+++++G C +
Sbjct: 239 EVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 67 WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYST 126
++ +L M +G++P+ + I+ LC+ K+ EA M+++ + P+ Y+T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 127 LMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 186
L+DGFC G I A + F M S D ++Y +I+G+C+ ++ EA L+ EM KG
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 187 IKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAV 246
++P VT+ L G + ++ A ++ M + + + TY T IDGLCK G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 247 ELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
EL + + + +I YN +++GLCKSG +E A++L L AD VTY ++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 307 CNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
C G+MDKA ++ +M + P ++ F L++GF +LL+ M K + P+A
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 367 SIVSMVV 373
+ + +V
Sbjct: 597 TTFNSLV 603
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 182/361 (50%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KPN+ Y +II LC+ + +A+ F +M + I PD V Y +LI G C D A +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
F+EM + + P V+T+ I+ C+ G M EA +L M + + P++ T++ L++G+C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G + A + M GC + V+Y LI+G CK +++ A L EM G++P +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYN++ GL + +E A+KL E + + ADT TY T +D CK+G + +A E+ + +
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ I +N L++G C G LE +L + + + + T+N ++ C +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
A ++ DM V P+ + L+ G + + L +MK K S S++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 373 V 373
+
Sbjct: 673 I 673
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 138/245 (56%)
Query: 5 NGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA 64
N I C PN VTY T+IDGLCKEG +D A L +M + P++ TYNS+++GLC +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 65 NDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTY 124
+ EA +L E G+ VT+ +MD CK+G+MD+A +L M+ + ++P T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 125 STLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 184
+ LM+GFCL G + E+L M + G + ++N L+ YC ++ A ++Y++M S
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 185 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVE 244
+G+ P TY L G + ++ A LF+EM+ + STY+ I G K +E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 245 AVELF 249
A E+F
Sbjct: 685 AREVF 689
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 155/283 (54%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P++VT+ +I+G CK G + A + M +P+VVTY +LI GLC D + A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L EM G+QP++ T+N I++ LCK+G ++EA +L+ + + TY+TLMD +C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+G++++A+E+ M G + V++N+L+NG+C + +E+ L M++KGI P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T+N+L + ++ A ++++M V D TY + G CK + EA LF+ +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVAD 295
+ + Y+ LI G K + A E+F + R L AD
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 138/222 (62%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN TYN+I++GLCK G +++A L + + +N D VTY +L+ C + + ++A+
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ EM+ +G+QP++VTFNV+M+ C +G +++ +LL+ M+ + + PNA T+++L+ +C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ + A ++ M S G D +Y L+ G+CK + ++EA L++EM KG +V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
TY+ L G + + A ++F++M+R+ +AAD ++ F D
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 160/302 (52%)
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+F E + GV +V ++N+++ +C+ G++ EA LL LM + P+ +YST+++G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G++++ +L M+ G K + Y +I C+ ++ EA + EM+ +GI P V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
Y TL G + + A K F EM D+ D TY I G C+ G +VEA +LF +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
E D + LI+G CK+G ++ A + + + +VVTY +I GLC +G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D A++L +M + + PN+ + ++++G + + ++L+ + + + D + +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 373 VD 374
+D
Sbjct: 533 MD 534
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKN-KEVEEALSLYREMVSKGIKPTVVT 193
G + A +F M + G S N+ + K+ + A+ ++RE G+ V +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN + + ++ +++ A L M+ D +Y+T ++G C+ G + + +L +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ + Y +I LC+ +L A E F + R+ ++ D V Y +I G C G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
A F +M + P+V+ + +I GF +I + +L H+M K + PD+ + ++
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 374 D 374
+
Sbjct: 429 N 429
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 221 DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSG-RLEI 279
D +D ++ F L G + EA +F + L + + N + L K +
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
A+ +FR P + +V +YNI+IH +C G++ +AH L L ME P+VI + T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 340 GFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
G+ R + KV +L+ MK K + P++ I ++ LL
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+G +P VT+N +++G C G ++ + L M + I P+ T+NSL+ C N+
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
A ++ +M +GV P T+ ++ CK M EA L M + + TYS L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 171
+ GF K A E+F M G D ++ + K K
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGY-IVE 244
G P V ++ F L + + A ++FE+M + + N ++ L K+ Y
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 245 AVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
A+ +FR + ++ +YN +I +C+ GR++ A L + + DV++Y+ +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
G C G++DK L M+ + PN I+ ++I RI K ++ E +M + ++P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 365 DASIVSMVVD 374
D + + ++D
Sbjct: 350 DTVVYTTLID 359
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ TY ++ G CK + +A LF +MKG+ + V TY+ LI G + EA+ +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
F +M +G+ F+ D K + D +D +++
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 1/306 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFL-QMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
+PN VTYN +ID K G K A F +M+ + PD +T+NSL+ W A+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM ++ ++ V ++N ++D +CK G+MD A +L M + + PN +YST++DGF
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
G+ + A LFG M +G D VSYN L++ Y K EEAL + REM S GIK V
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
VTYN L G + + + K+F EM+R+ V + TY+T IDG K G EA+E+FR
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
D+ Y+ LID LCK+G + A+ L + + + +VVTYN +I
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 312 MDKAHD 317
MD++ D
Sbjct: 600 MDRSAD 605
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 4/332 (1%)
Query: 15 NTV-TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNEAKR 72
NTV ++ +I + G ++A ++F MK + P++VTYN++I ++ + +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASR-LLDLMVQRDVRPNAFTYSTLMDGF 131
F EM GVQP +TFN ++ +C G + EA+R L D M R + + F+Y+TL+D
Sbjct: 326 FFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C G+++ A E+ M + VSY+ +I+G+ K +EAL+L+ EM GI
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
V+YNTL ++ + E AL + EM + D TYN + G K G E ++F
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ ++ Y+ LIDG K G + A+E+FR L ADVV Y+ +I LC +G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
+ A L +M + ++PNV+ + ++I F R
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 177/356 (49%), Gaps = 1/356 (0%)
Query: 20 NTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMD 79
+ +I L + G V AK +F V +++LI + EA +F M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 80 QGVQPSVVTFNVIMDELCKNG-KMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKIN 138
G++P++VT+N ++D K G + + ++ D M + V+P+ T+++L+ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
A LF M + + D SYN L++ CK +++ A + +M K I P VV+Y+T+
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
G + + + AL LF EM+ +A D +YNT + K G EA+++ R + + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
D+ YN L+ G K G+ + ++F + R ++ +++TY+ +I G G +A ++
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
F + + + +V+++ LI + + L+ +M ++ + P+ + ++D
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 157/309 (50%), Gaps = 3/309 (0%)
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
AKR+F G +V F+ ++ ++G +EA + + M + +RPN TY+ ++D
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 130 GFCLTG--KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
C G + + + F M+ G + D +++N L+ + E A +L+ EM ++ I
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+ V +YNTL + + Q++ A ++ +M + + +Y+T IDG K G EA+
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
LF + L LD +YN L+ K GR E AL++ R + + DVVTYN ++ G
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
G+ D+ +F +M+ V PN++ + TLI G+ + + +E+ + K + D
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 368 IVSMVVDLL 376
+ S ++D L
Sbjct: 551 LYSALIDAL 559
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 33/301 (10%)
Query: 10 VVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE 69
V K + VTYN ++ G K+G D+ K +F +MK E++ P+++TY++LI G + E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A +F E G++ VV ++ ++D LCKNG + A L+D M + + PN TY++++D
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 130 GFCLTGKINRAEEL-------FGSMESMGCKHDDVSYNILINGYCKN-------KEVEEA 175
F + ++R+ + F S + + I + G K+ EE
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG 652
Query: 176 -------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTST 228
L ++R+M IKP VVT++ + + E A L EE++ D
Sbjct: 653 MQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKV 708
Query: 229 YNTFIDGLC---KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLC----KSGRLEIAL 281
Y + GL + ++A LF + + YN L D L K G +AL
Sbjct: 709 YGV-VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVAL 767
Query: 282 E 282
E
Sbjct: 768 E 768
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 192/362 (53%), Gaps = 2/362 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P +TYNT+I G CK G + +A +F M + P+V TY LI GLC EA +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M+++ +P+ VT+N+I+++LCK+G + +A +++LM +R RP+ TY+ L+ G C
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 134 TGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
G ++ A +L M +S D +SYN LI+G CK + +AL +Y +V K
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
VT N L + V A++L++++ + ++ TY IDG CK G + A L
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ + + + + YNCL+ LCK G L+ A LF + R DVV++NIMI G G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+ A L + M ++P++ + LI+ F+++ + I KM + PDA I
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 372 VV 373
V+
Sbjct: 640 VL 641
Score = 201 bits (512), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 192/403 (47%), Gaps = 37/403 (9%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
G C + VT+ +ID CK G +D+A +MK + D+V Y SLI G C + +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 69 EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
K LF E++++G P +T+N ++ CK G++ EAS + + M++R VRPN +TY+ L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
DG C GK A +L M + + V+YNI+IN CK+ V +A+ + M + +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS--TYNTFIDGLCKN------- 239
P +TYN L GL ++ A KL M +D D +YN I GLCK
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 240 ----------------------------GYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
G + +A+EL++ + K + Y +IDG
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
CK+G L +A L + L V YN ++ LC +G +D+A LF +M+ + P+V
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ F +I G ++ LL M + PD S +++
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 196/362 (54%), Gaps = 2/362 (0%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N +N ++ GLC+ KA +L +M+ ++ PDV +YN++I G C + +A L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
EM G S+VT+ +++D CK GKMDEA L M + + Y++L+ GFC
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G+++R + LF + G ++YN LI G+CK +++EA ++ M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
L GL + + + AL+L M D + TYN I+ LCK+G + +AVE+ +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVA--DVVTYNIMIHGLCNDGQM 312
+ D YN L+ GLC G L+ A +L + + DV++YN +IHGLC + ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A D++ + E A + + L++ ++ +K +EL ++ + K++ ++ + +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 373 VD 374
+D
Sbjct: 501 ID 502
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 184/355 (51%), Gaps = 6/355 (1%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ +YNT+I G C+ ++KA L +MKG + +VT+ LI C A +EA
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM G++ +V + ++ C G++D L D +++R P A TY+TL+ GFC
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G++ A E+F M G + + +Y LI+G C + +EAL L M+ K +P VT
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN + L + V A+++ E M++ D TYN + GLC G + EA +L +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM- 413
Query: 254 ILK----CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
LK + D+ +YN LI GLCK RL AL+++ L ++ D VT NI+++
Sbjct: 414 -LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
G ++KA +L+ + ++ + N + +I GF + + LL KM+ ++ P
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 154/294 (52%)
Query: 77 MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
M+ +G +V N+++ LC+N + +A LL M + + P+ F+Y+T++ GFC +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
+ +A EL M+ GC V++ ILI+ +CK +++EA+ +EM G++ +V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
L G + +++ LF+E+ + TYNT I G CK G + EA E+F +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
++ Y LIDGLC G+ + AL+L + + + VTYNI+I+ LC DG + A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
++ M++ P+ I + L+ G + +LL+ M + D ++S
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A +F + +D G + N +M +L ++ + A M++ D N + S L++
Sbjct: 57 AVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115
Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
+ K A + M G + ++NIL+ G C+N E +A+SL REM + P
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175
Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
V +YNT+ G E ++E AL+L EM+ + T+ ID CK G + EA+
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
+ + + E D+ Y LI G C G L+ LF + R +TYN +I G C
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
GQ+ +A ++F M E V PNV + LI G + K + ++LL+ M EK P+A
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 370 SMVVDLL 376
+++++ L
Sbjct: 356 NIIINKL 362
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 3/310 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKA-KALFLQMKGEN-INPDVVTYNSLIHGLCHANDWNEA 70
+P+ +TYN ++ GLC +G +D+A K L+L +K + +PDV++YN+LIHGLC N ++A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
++ ++++ VT N++++ K G +++A L + + N+ TY+ ++DG
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
FC TG +N A+ L M + YN L++ CK +++A L+ EM P
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
VV++N + G + ++ A L M R ++ D TY+ I+ K GY+ EA+ F
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN-D 309
+ E D + ++ G + EL + L + +V D ++ +CN
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Query: 310 GQMDKAHDLF 319
MD A L
Sbjct: 684 ANMDLAKRLL 693
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 6/314 (1%)
Query: 55 NSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQ 114
N+L+ L + + A + +M++ + V+ + +++ + K A +L LM++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 115 RDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 174
R N + ++ L+ G C + +A L M D SYN +I G+C+ KE+E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 175 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID 234
AL L EM G ++VT+ L + +++ A+ +EM+ + AD Y + I
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 235 GLCKNGYIVEAVELFRTL---GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRV 291
G C G + LF + G C + YN LI G CK G+L+ A E+F + R
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAI---TYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 292 LVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVI 351
+ +V TY +I GLC G+ +A L M E PN + + +I+ + + +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 352 ELLHKMKEKKVMPD 365
E++ MK+++ PD
Sbjct: 373 EIVELMKKRRTRPD 386
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 188/357 (52%), Gaps = 3/357 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ TY T++DGLCKE +D+A L +M+ E +P V YN LI GLC D
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVT 277
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+L M +G P+ VT+N ++ LC GK+D+A LL+ MV PN TY TL++G
Sbjct: 278 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGL 337
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
+ A L SME G + Y++LI+G K + EEA+SL+R+M KG KP +
Sbjct: 338 VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI 397
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
V Y+ L GL + A ++ M + TY++ + G K G EAV++++
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ C + Y+ LIDGLC GR++ A+ ++ + + D V Y+ +I GLC G
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 312 MDKAHDLFLDM---EENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
MD A L+ +M EE P+V+ + L+ G S+ ++LL+ M ++ PD
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 160/298 (53%), Gaps = 3/298 (1%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN VTYNT+I GLC +G +DKA +L +M P+ VTY +LI+GL +A
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
RL M ++G + ++V++ L K GK +EA L M ++ +PN YS L+DG
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK N A+E+ M + GC + +Y+ L+ G+ K EEA+ +++EM G
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
Y+ L GL + +V+ A+ ++ +M + DT Y++ I GLC G + A++L+
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 252 LGIL---KCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
+ K + D+ YN L+DGLC + A++L S+ R DV+T N ++ L
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 15/363 (4%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLI-----HGLCHANDWNEAKR 72
T +++I+ G D + L +++ EN V+ S I +G H D +A
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPD--KAVD 133
Query: 73 LFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRD----VRPNAFTYSTL 127
LF M+D+ + SV +FN +++ + G D +V + + PN +++ +
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
+ C ++RA E+F M C D +Y L++G CK + ++EA+ L EM S+G
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
P+ V YN L GL + + KL + M + TYNT I GLC G + +AV
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
L + KC + Y LI+GL K R A+ L S+ R + Y+++I GL
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
+G+ ++A L+ M E PN++++ L+ G R KP++ E+L++M +P+A
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 368 IVS 370
S
Sbjct: 434 TYS 436
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 24/260 (9%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
CKPN V Y+ ++DGLC+EG ++AK + +M P+ TY+SL+ G EA
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+++ EM G + ++V++D LC G++ EA + M+ ++P+ YS+++ G
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 132 CLTGKINRAEELFGSM---ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
C G ++ A +L+ M E + D V+YNIL++G C K++ A+ L M+ +G
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Query: 189 PTVVTYNT---------------------LFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
P V+T NT L + L + +V A + E M +A TS
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTS 632
Query: 228 TYNTFIDGLCKNGYIVEAVE 247
T+ + +CK I A++
Sbjct: 633 TWAMIVREICKPKKINAAID 652
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 194/357 (54%), Gaps = 1/357 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN ++YN +I+GLC+EG + + + +M + D VTYN+LI G C ++++A
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ EM+ G+ PSV+T+ ++ +CK G M+ A LD M R + PN TY+TL+DGF
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G +N A + M G V+YN LING+C ++E+A+++ +M KG+ P VV
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
+Y+T+ G + V+ AL++ EM + DT TY++ I G C+ EA +L+ +
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ D Y LI+ C G LE AL+L + + ++ DVVTY+++I+GL +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
+A L L + P+ + + TLI I S V+ L+ K +M +A V
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS-VVSLIKGFCMKGMMTEADQV 627
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 189/353 (53%), Gaps = 1/353 (0%)
Query: 14 PNTVTYNTIIDGLCKEGF-VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
P ++YN ++D + + A+ +F +M ++P+V TYN LI G C A + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF +M +G P+VVT+N ++D CK K+D+ +LL M + + PN +Y+ +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G++ + M G D+V+YN LI GYCK +AL ++ EM+ G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY +L + + + A++ ++M+ + + TY T +DG + GY+ EA + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ YN LI+G C +G++E A+ + + + L DVV+Y+ ++ G C +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
D+A + +M E + P+ I + +LI GF + + +L +M + PD
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 189/361 (52%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN TYN +I G C G +D A LF +M+ + P+VVTYN+LI G C ++ +L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M +G++P+++++NV+++ LC+ G+M E S +L M +R + TY+TL+ G+C
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G ++A + M G ++Y LI+ CK + A+ +M +G+ P T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y TL G + + A ++ EM + + TYN I+G C G + +A+ + +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
D+ +Y+ ++ G C+S ++ AL + R + + + D +TY+ +I G C +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A DL+ +M + P+ + LI+ + K ++L ++M EK V+PD S+++
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 374 D 374
+
Sbjct: 563 N 563
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 191/390 (48%), Gaps = 59/390 (15%)
Query: 17 VTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFE 76
VTYNT+I G CKEG +A + +M + P V+TY SLIH +C A + N A +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 77 MMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGK 136
M +G+ P+ T+ ++D + G M+EA R+L M P+ TY+ L++G C+TGK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
+ A + M+ G D VSY+ +++G+C++ +V+EAL + REMV KGIKP +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL---G 253
L G E + + A L+EEM R + D TY I+ C G + +A++L + G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIA----LELF--RSLPRRVLV-------------- 293
+L D+ Y+ LI+GL K R A L+LF S+P V
Sbjct: 551 VLP---DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 294 ------------------------------ADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
D YNIMIHG C G + KA+ L+ +M
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIEL 353
++ + + + L+ ++K KV EL
Sbjct: 668 KSGFLLHTVTVIALVKA---LHKEGKVNEL 694
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 173/316 (54%), Gaps = 15/316 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN TY T++DG ++G++++A + +M +P VVTYN+LI+G C +A +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M ++G+ P VV+++ ++ C++ +DEA R+ MV++ ++P+ TYS+L+ GFC
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+ A +L+ M +G D+ +Y LIN YC ++E+AL L+ EMV KG+ P VVT
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFID---------------GLCK 238
Y+ L GL + + A +L ++ ++ TY+T I+ G C
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
G + EA ++F ++ + D AYN +I G C++G + A L++ + + + VT
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 299 YNIMIHGLCNDGQMDK 314
++ L +G++++
Sbjct: 678 VIALVKALHKEGKVNE 693
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 1/365 (0%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN-DWNE 69
+C + ++ ++ + +DKA ++ + P V++YN+++ + + +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A+ +F EM++ V P+V T+N+++ C G +D A L D M + PN TY+TL+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
G+C KI+ +L SM G + + +SYN++ING C+ ++E + EM +G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
VTYNTL G + AL + EM R + TY + I +CK G + A+E
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
+ + + + Y L+DG + G + A + R + VVTYN +I+G C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 310 GQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIV 369
G+M+ A + DM+E ++P+V+ + T++ GF R + + + +M EK + PD
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 370 SMVVD 374
S ++
Sbjct: 489 SSLIQ 493
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 15/196 (7%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+T+TY+++I G C++ +A L+ +M + PD TY +LI+ C D +A +
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD--- 129
L EM+++GV P VVT++V+++ L K + EA RLL + + P+ TY TL++
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 130 ------------GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
GFC+ G + A+++F SM K D +YNI+I+G+C+ ++ +A +
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 178 LYREMVSKGIKPTVVT 193
LY+EMV G VT
Sbjct: 662 LYKEMVKSGFLLHTVT 677
Score = 35.0 bits (79), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 44/111 (39%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+ YN +I G C+ G + KA L+ +M VT +L+ L NE
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
+ ++ V+++ + G MD +L M + PN +
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 200/357 (56%), Gaps = 5/357 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH---ANDWNE 69
+PN T+N +I+ LCK G ++KA+ + MK +P+VV+YN+LI G C +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A + EM++ V P++ TFN+++D K+ + + ++ M+ +DV+PN +Y++L++
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 130 GFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 189
G C GKI+ A + M S G + + ++YN LING+CKN ++EAL ++ + +G P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 190 TVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF 249
T YN L ++ +++ L EEM+R+ + D TYN I GLC+NG I A +LF
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 250 RTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
L K D+ ++ L++G C+ G A L + + + L +TYNI++ G C +
Sbjct: 460 DQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 310 GQMDKAHDLFLDME-ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
G + A ++ ME E + NV + L+ G+ + K LL++M EK ++P+
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 204 bits (520), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 186/327 (56%), Gaps = 5/327 (1%)
Query: 12 CKPNTVTYNTIIDGLCK---EGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWN 68
C PN V+YNT+IDG CK G + KA A+ +M +++P++ T+N LI G ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 69 EAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
+ ++F EM+DQ V+P+V+++N +++ LC GK+ EA + D MV V+PN TY+ L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
+GFC + A ++FGS++ G YN+LI+ YCK ++++ +L EM +GI
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
P V TYN L GL +E A KLF+++ + D T++ ++G C+ G +A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR-RVLVADVVTYNIMIHGLC 307
+ + + + YN ++ G CK G L+ A + + + R L +V +YN+++ G
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIF 334
G+++ A+ L +M E + PN I +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 178/335 (53%), Gaps = 11/335 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
CKP ++ L KE + ++ +M I P+V T+N +I+ LC N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCK---NGKMDEASRLLDLMVQRDVRPNAFTYSTLM 128
+ +M G P+VV++N ++D CK NGKM +A +L MV+ DV PN T++ L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 129 DGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
DGF + + ++F M K + +SYN LING C ++ EA+S+ +MVS G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
P ++TYN L G + ++ AL +F ++ T YN ID CK G I + L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCN 308
+ D+ YNCLI GLC++G +E A +LF L + L D+VT++I++ G C
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482
Query: 309 DGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
G+ KA L +M + + P + + ++ G+ +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 182/355 (51%), Gaps = 17/355 (4%)
Query: 21 TIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHG---LCHANDWNEAKRLFFEM 77
+ +DG + G + ++F + D V NS+I L +AN N L FE
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAIS----MCDNVCVNSIIADMLVLAYAN--NSRFELGFEA 175
Query: 78 MDQ----GVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+ G + S ++ +M L K + + + M++R ++PN FT++ +++ C
Sbjct: 176 FKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK 235
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCK---NKEVEEALSLYREMVSKGIKPT 190
TGK+N+A ++ M+ GC + VSYN LI+GYCK N ++ +A ++ +EMV + P
Sbjct: 236 TGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPN 295
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
+ T+N L G ++ + ++K+F+EM DV + +YN+ I+GLC G I EA+ +
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
+ + ++ YN LI+G CK+ L+ AL++F S+ + V YN++I C G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
++D L +ME + P+V + LI G R +L ++ K +PD
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPD 469
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 37/266 (13%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KPN ++YN++I+GLC G + +A ++ +M + P+++TYN+LI+G C + EA
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+F + QG P+ +N+++D CK GK+D+ L + M + + P+ TY+ L+ G C
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP--- 189
G I A++LF + S G D V+++IL+ GYC+ E +A L +EM G+KP
Sbjct: 448 RNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 190 ---------------------------------TVVTYNTLFLGLFEIHQVEHALKLFEE 216
V +YN L G + ++E A L E
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYI 242
M + + TY + + G++
Sbjct: 567 MLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 160/343 (46%), Gaps = 9/343 (2%)
Query: 38 LFLQMKGENINPDV-VTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVT-FNVIMDE 95
LF Q+ ++PD+ + Y S L +D + + L F+++ + +D
Sbjct: 70 LFRQLISSELDPDLCLRYYSW---LVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDG 126
Query: 96 LCKNGKMDEASRLLDLMVQRD-VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKH 154
+NG + + + D V N+ L+ + + E F G K
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186
Query: 155 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
+S L+ K + +Y+EM+ + I+P V T+N + L + ++ A +
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 215 EEMQRDDVAADTSTYNTFIDGLCK---NGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
E+M+ + + +YNT IDG CK NG + +A + + + ++ +N LIDG
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
K L ++++F+ + + + +V++YN +I+GLCN G++ +A + M V PN+
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
I + LI+GF + + + +++ +K + +P + +M++D
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 190/352 (53%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN TY+ +IDG CK G V +A L+ ++ + P+VV + +L+ G C A + A+ L
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F M+ GV P++ +N ++ CK+G M EA LL M ++ P+ FTY+ L++G C+
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
++ A LF M++ +YN LI+GYCK +E+AL L EM + G++P ++T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
++TL G + ++ A+ L+ EM + D TY ID K + EA+ L+ +
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ + CL+DG K GRL +A++ ++ ++ + V + +I GLC +G +
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+A F DM + P++ +V+++ G ++ + + + L M + ++P+
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 173/320 (54%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN V + T++DG CK + A++LF+ M ++P++ YN LIHG C + + EA L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM + P V T+ ++++ LC ++ EA+RL M + P++ TY++L+ G+C
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+ +A +L M + G + + ++++ LI+GYC ++++ A+ LY EM KGI P VVT
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y L F+ ++ AL+L+ +M + + T+ +DG K G + A++ ++
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ + + CLI+GLC++G + A F + + D+ +Y M+ G + ++
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601
Query: 314 KAHDLFLDMEENAVAPNVII 333
L DM + + PN+++
Sbjct: 602 DTMMLQCDMIKTGILPNLLV 621
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 176/348 (50%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ Y + K+G K + L +M I P+V Y I LC N EA+++
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F M GV P++ T++ ++D CK G + +A L ++ ++ PN + TL+DGFC
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
++ A LF M G + YN LI+G+CK+ + EA+ L EM S + P V T
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y L GL QV A +LF++M+ + + ++TYN+ I G CK + +A++L +
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
E +I ++ LIDG C ++ A+ L+ + + +V DVVTY +I + M
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKK 361
+A L+ DM E + PN F L+ GF + + S I+ + +++
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 181/363 (49%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P++ +I++GL + D + M + PDV Y L +++ +
Sbjct: 160 CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKE 219
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+L EM G++P+V + + + +LC++ KM+EA ++ +LM + V PN +TYS ++DG+
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C TG + +A L+ + + V + L++G+CK +E+ A SL+ MV G+ P +
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
YN L G + + A+ L EM+ +++ D TY I+GLC + EA LF+
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ + YN LI G CK +E AL+L + + +++T++ +I G CN
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+ A L+ +M + P+V+ + LI + + + L M E + P+ +
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 372 VVD 374
+VD
Sbjct: 520 LVD 522
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 3/345 (0%)
Query: 30 GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
G ++A + +MK +PD S+++GL ++ + M+ +G+ P V +
Sbjct: 146 GLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202
Query: 90 NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
V+ K G + +LLD M ++PN + Y+ + C K+ AE++F M+
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK 262
Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
G + +Y+ +I+GYCK V +A LY+E++ + P VV + TL G + ++
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322
Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
A LF M + V + YN I G CK+G ++EAV L + L D+ Y LI+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
GLC ++ A LF+ + + TYN +IHG C + M++A DL +M + V P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
N+I F TLI G+ + + L +M K ++PD + ++D
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P++ TYN++I G CKE +++A L +M + P+++T+++LI G C+ D A L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+FEM +G+ P VVT+ ++D K M EA RL M++ + PN T++ L+DGF
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G+++ A + + + V + LI G C+N + A + +M S GI P + +
Sbjct: 527 EGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICS 586
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
Y ++ G + ++ + L +M + + + NGY+ A
Sbjct: 587 YVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 35/153 (22%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN +T++T+IDG C + A L+ +M + I PDVVTY +LI + EA R
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 73 LFFEMMDQGVQPSVVTFNVIMDE-----------------------------------LC 97
L+ +M++ G+ P+ TF ++D LC
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 98 KNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
+NG + ASR M + P+ +Y +++ G
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 184/363 (50%), Gaps = 1/363 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ TY ++I G C+ +D A +F +M + + V Y LIHGLC A +EA L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F +M D P+V T+ V++ LC + + EA L+ M + ++PN TY+ L+D C
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K +A EL G M G + ++YN LINGYCK +E+A+ + M S+ + P T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YN L G + V A+ + +M V D TYN+ IDG C++G A L +
Sbjct: 431 YNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
D Y +ID LCKS R+E A +LF SL ++ + +VV Y +I G C G++D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+AH + M PN + F LIHG K + L KM + + P S ++++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 374 DLL 376
L
Sbjct: 610 HRL 612
Score = 201 bits (512), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 188/356 (52%), Gaps = 2/356 (0%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
VC PN TYN +++G CK G V++A ++ ++PD TY SLI G C D + A
Sbjct: 214 VC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
++F EM +G + + V + ++ LC ++DEA L M + P TY+ L+
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
C + + + A L ME G K + +Y +LI+ C + E+A L +M+ KG+ P
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
V+TYN L G + +E A+ + E M+ ++ +T TYN I G CK+ + +A+ +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLN 451
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
+ K D+ YN LIDG C+SG + A L + R LV D TY MI LC
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
++++A DLF +E+ V PNV+++ LI G+ + K + +L KM K +P++
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 187/396 (47%), Gaps = 34/396 (8%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+ N V Y +I GLC +D+A LF++MK + P V TY LI LC + +EA
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
L EM + G++P++ T+ V++D LC K ++A LL M+++ + PN TY+ L++G+
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 132 CLTGKINRAEELFGSMESMG---------------CKH-------------------DDV 157
C G I A ++ MES CK D V
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV 463
Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
+YN LI+G C++ + A L M +G+ P TY ++ L + +VE A LF+ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
++ V + Y IDG CK G + EA + + C + +N LI GLC G+L
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
+ A L + + L V T I+IH L DG D A+ F M + P+ + T
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
I + R + +++ KM+E V PD S ++
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 177/349 (50%), Gaps = 19/349 (5%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PNT TYN +I G CK V KA + +M + PDVVTYNSLI G C + +++ A RL
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M D+G+ P T+ ++D LCK+ +++EA L D + Q+ V PN Y+ L+DG+C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
GK++ A + M S C + +++N LI+G C + +++EA L +MV G++PTV T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
L L + +HA F++M D TY TFI C+ G +++A ++ +
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSL------PRRVLVADVVTYNI-MIHG- 305
D+ Y+ LI G G+ A ++ + + P + ++ + + M +G
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 306 -------LC---NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRI 344
LC N + D +L M E++V PN + LI G +
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 19/348 (5%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN++T+N +I GLC +G + +A L +M + P V T LIH L D++ A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
F +M+ G +P T+ + C+ G++ +A ++ M + V P+ FTYS+L+ G+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILIN-----GYCKNK-------------EVE 173
G+ N A ++ M GC+ ++ LI Y K K E +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDD-VAADTSTYNTF 232
+ L +MV + P +Y L LG+ E+ + A K+F+ MQR++ ++ +N
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
+ CK EA ++ + + +++ LI GL K G E +F++L +
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHG 340
D + + I+I G+ G ++ ++LF ME+N + + LI G
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%)
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNTL L V+ +++ EM D V + TYN ++G CK G + EA + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ D Y LI G C+ L+ A ++F +P + + V Y +IHGLC ++D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A DLF+ M+++ P V + LI + S+ + L+ +M+E + P+ ++++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 374 DLL 376
D L
Sbjct: 366 DSL 368
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 202/397 (50%), Gaps = 35/397 (8%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ YN +I+G CK +D A + +M+ ++ +PD VTYN +I LC + A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ +++ QP+V+T+ ++++ G +DEA +L+D M+ R ++P+ FTY+T++ G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYN-------------------------------- 160
G ++RA E+ ++E GC+ D +SYN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 161 ---ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
ILI C++ ++EEA++L + M KG+ P +Y+ L +++ A++ E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRL 277
D D YNT + LCKNG +A+E+F LG + C + +YN + L SG
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 278 EIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTL 337
AL + + + D +TYN MI LC +G +D+A +L +DM P+V+ + +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 338 IHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+ GF + ++ I +L M P+ + +++++
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 175/310 (56%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+ TYNTII G+CKEG VD+A + ++ + PDV++YN L+ L + W E ++
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L +M + P+VVT+++++ LC++GK++EA LL LM ++ + P+A++Y L+ FC
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G+++ A E +M S GC D V+YN ++ CKN + ++AL ++ ++ G P
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
+YNT+F L+ AL + EM + + D TYN+ I LC+ G + EA EL +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ + YN ++ G CK+ R+E A+ + S+ + TY ++I G+ G
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 313 DKAHDLFLDM 322
+A +L D+
Sbjct: 560 AEAMELANDL 569
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 176/341 (51%), Gaps = 1/341 (0%)
Query: 27 CKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSV 86
C+ G ++ L M + NPDV+ LI G + +A R+ E++++ QP V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 87 VTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGS 146
+N +++ CK ++D+A+R+LD M +D P+ TY+ ++ C GK++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 147 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 206
+ S C+ ++Y ILI V+EAL L EM+S+G+KP + TYNT+ G+ +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 207 VEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC 266
V+ A ++ ++ D +YN + L G E +L + KC+ ++ Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 267 LIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENA 326
LI LC+ G++E A+ L + + + L D +Y+ +I C +G++D A + M +
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
P+++ + T++ + K + +E+ K+ E P++S
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 34/308 (11%)
Query: 92 IMDELCKNGKMDEASRLLDLMVQR----DV------------------------------ 117
I C++G E+ LL+ MV++ DV
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 118 RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 177
+P+ F Y+ L++GFC +I+ A + M S D V+YNI+I C +++ AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 178 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLC 237
+ +++S +PTV+TY L V+ ALKL +EM + D TYNT I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 238 KNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVV 297
K G + A E+ R L + CE D+ +YN L+ L G+ E +L + +VV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 298 TYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKM 357
TY+I+I LC DG++++A +L M+E + P+ + LI F R + IE L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 358 KEKKVMPD 365
+PD
Sbjct: 395 ISDGCLPD 402
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ ++YN ++ L +G ++ + L +M E +P+VVTY+ LI LC EA
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
L M ++G+ P +++ ++ C+ G++D A L+ M+ P+ Y+T++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C GK ++A E+FG + +GC + SYN + + + + AL + EM+S GI P
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
+TYN++ L V+ A +L +M+ + TYN + G CK I +A+ + +
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
+ C + Y LI+G+ +G A+EL L R
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 37/252 (14%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN VTY+ +I LC++G +++A L MK + + PD +Y+ LI C + A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEA-------------------------- 105
M+ G P +V +N ++ LCKNGK D+A
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 106 ------SRLLDL---MVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDD 156
R L + M+ + P+ TY++++ C G ++ A EL M S
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 157 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFE 215
V+YNI++ G+CK +E+A+++ MV G +P TY L G+ F ++ E A++L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELAN 567
Query: 216 EMQRDDVAADTS 227
++ R D ++ S
Sbjct: 568 DLVRIDAISEYS 579
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C +G + L +M G D + LI G+ + + +A+ + E++ K +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
YN L G ++++++ A ++ + M+ D + DT TYN I LC G + A+++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
L C+ + Y LI+ G ++ AL+L + R L D+ TYN +I G+C +G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+D+A ++ ++E P+VI + L+ + K + +L+ KM +K P+ S+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 372 VVDLL 376
++ L
Sbjct: 339 LITTL 343
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 6 GEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAN 65
GE+G C PN+ +YNT+ L G +A + L+M I+PD +TYNS+I LC
Sbjct: 430 GEVG--CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 66 DWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYS 125
+EA L +M PSVVT+N+++ CK ++++A +L+ MV RPN TY+
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 126 TLMDGFCLTGKINRAEEL 143
L++G G A EL
Sbjct: 548 VLIEGIGFAGYRAEAMEL 565
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 198/364 (54%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
VC P ++ + L G +++A F +MK + P + N L+H ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
KR F +M+ G +P+V T+N+++D +CK G ++ A L + M R + P+ TY++++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
F G+++ F M+ M C+ D ++YN LIN +CK ++ L YREM G+KP
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
VV+Y+TL + ++ A+K + +M+R + + TY + ID CK G + +A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
+ + E ++ Y LIDGLC + R++ A ELF + ++ ++ +YN +IHG
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
MD+A +L +++ + P+++++ T I G + K ++++MKE + ++ I +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 371 MVVD 374
++D
Sbjct: 547 TLMD 550
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 36/390 (9%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ +TYN +I+ CK G + + +MKG + P+VV+Y++L+ C +A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+ + +M G+ P+ T+ ++D CK G + +A RL + M+Q V N TY+ L+DG
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
C ++ AEELFG M++ G + SYN LI+G+ K K ++ AL L E+ +GIKP +
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 192 VTYNTLFLGLFEIHQVEHA-----------------------------------LKLFEE 216
+ Y T GL + ++E A L L +E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 217 MQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF-RTLGILKCELDIQAYNCLIDGLCKSG 275
M+ D+ T+ IDGLCKN + +AV+ F R + + + +IDGLCK
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 276 RLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFV 335
++E A LF + ++ LV D Y ++ G G + +A L M E + +++ +
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 336 TLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
+L+ G N+ K L +M + + PD
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 187/403 (46%), Gaps = 36/403 (8%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
IG +P TYN +ID +CKEG V+ A+ LF +MK + PD VTYNS+I G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
++ F EM D +P V+T+N +++ CK GK+ M ++PN +YSTL
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
+D FC G + +A + + M +G ++ +Y LI+ CK + +A L EM+ G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
+ VVTY L GL + +++ A +LF +M V + ++YN I G K + A+E
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 248 LFRTLGILKCELDIQAYNCLIDGLC----------------------------------- 272
L L + D+ Y I GLC
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 273 KSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEEN-AVAPNV 331
KSG L L + + VVT+ ++I GLC + + KA D F + + + N
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
IF +I G + N+ L +M +K ++PD + + ++D
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 150/278 (53%), Gaps = 1/278 (0%)
Query: 4 GNGEIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCH 63
GN + V + N VTY +IDGLC + +A+ LF +M + P++ +YN+LIHG
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 64 ANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFT 123
A + + A L E+ +G++P ++ + + LC K++ A +++ M + ++ N+
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 124 YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 183
Y+TLMD + +G L M+ + + V++ +LI+G CKNK V +A+ + +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 184 SK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
+ G++ + + GL + +QVE A LFE+M + + D + Y + +DG K G +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIA 280
+EA+ L + + +LD+ AY L+ GL +L+ A
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 36/271 (13%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN +YN +I G K +D+A L ++KG I PD++ Y + I GLC AK +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV---------------- 117
EM + G++ + + + +MD K+G E LLD M + D+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 118 --------------------RPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDV 157
+ NA ++ ++DG C ++ A LF M G D
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 158 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
+Y L++G K V EAL+L +M G+K ++ Y +L GL +Q++ A EEM
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Query: 218 QRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
+ + D + + + G I EAVEL
Sbjct: 710 IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
K N++ Y T++D K G + L +MK +I VVT+ LI GLC ++A
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 73 LFFEMM-DQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
F + D G+Q + F ++D LCK+ +++ A+ L + MVQ+ + P+ Y++LMDG
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
G + A L M +G K D ++Y L+ G ++++A S EM+ +GI P
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 192 VTYNTLFLGLFEIHQVEHALKL 213
V ++ +E+ ++ A++L
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ Y +++DG K+G V +A AL +M + D++ Y SL+ GL H N +A+
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDV 117
EM+ +G+ P V ++ + + G +DEA L +++ +
Sbjct: 706 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 192/364 (52%), Gaps = 3/364 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP VTYNT++ G G ++ A+ + +MK + PD+ TYN ++ +C+ +E R
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR 316
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
EM + G+ P V++N+++ NG ++ A D MV++ + P +TY+TL+ G
Sbjct: 317 ---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+ KI AE L + G D V+YNILINGYC++ + ++A +L+ EM++ GI+PT
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY +L L ++ A +LFE++ + D NT +DG C G + A L + +
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
++ D YNCL+ GLC G+ E A EL + RR + D ++YN +I G G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
A + +M P ++ + L+ G + + ELL +MK + ++P+ S V
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 373 VDLL 376
++ +
Sbjct: 614 IEAM 617
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 185/386 (47%), Gaps = 38/386 (9%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
+T+ ++ ++ C+ VD+A F MK + P T N ++ L N A +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M ++ +V TFN++++ LCK GK+ +A L +M ++P TY+TL+ GF L
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 135 GKI--------------------------------NRAEELFGSMESMGCKHDDVSYNIL 162
G+I RA E+ M+ +G D VSYNIL
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333
Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
I G N ++E A + EMV +G+ PT TYNTL GLF +++E A L E++ +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 223 AADTSTYNTFIDGLCKNGYIVEAVEL---FRTLGILKCELDIQAYNCLIDGLCKSGRLEI 279
D+ TYN I+G C++G +A L T GI + Y LI LC+ +
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF---TYTSLIYVLCRKNKTRE 450
Query: 280 ALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIH 339
A ELF + + + D+V N ++ G C G MD+A L +M+ ++ P+ + + L+
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 340 GFVRINKPSKVIELLHKMKEKKVMPD 365
G K + EL+ +MK + + PD
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%)
Query: 8 IGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
+G KP+ V NT++DG C G +D+A +L +M +INPD VTYN L+ GLC +
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
EA+ L EM +G++P +++N ++ K G A + D M+ P TY+ L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
+ G + AEEL M+S G +D S+
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 184/336 (54%), Gaps = 2/336 (0%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N +N +++ CKEG + A+ +F ++ ++ P VV++N+LI+G C + +E RL
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
+M +P V T++ +++ LCK KMD A L D M +R + PN ++TL+ G
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
G+I+ +E + M S G + D V YN L+NG+CKN ++ A ++ M+ +G++P +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
TL G VE AL++ +EM ++ + D ++ + G+CK G +++A R +
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
+ D Y ++D CK G + +L + + V VVTYN++++GLC GQM
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 315 AHDLFLDMEEN-AVAPNVIIFVTLIHGFVRINKPSK 349
A D+ LD N V P+ I + TL+ G R SK
Sbjct: 539 A-DMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 169/316 (53%)
Query: 50 DVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL 109
+V +N L++ C + ++A+++F E+ + +QP+VV+FN +++ CK G +DE RL
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 110 DLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 169
M + RP+ FTYS L++ C K++ A LF M G +DV + LI+G+ +N
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 170 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTY 229
E++ Y++M+SKG++P +V YNTL G + + A + + M R + D TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 230 NTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPR 289
T IDG C+ G + A+E+ + + ELD ++ L+ G+CK GR+ A R + R
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 290 RVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSK 349
+ D VTY +M+ C G L +M+ + P+V+ + L++G ++ +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 350 VIELLHKMKEKKVMPD 365
LL M V+PD
Sbjct: 539 ADMLLDAMLNIGVVPD 554
Score = 167 bits (424), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 3/294 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ TY+ +I+ LCKE +D A LF +M + P+ V + +LIHG + + K
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ +M+ +G+QP +V +N +++ CKNG + A ++D M++R +RP+ TY+TL+DGFC
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G + A E+ M+ G + D V ++ L+ G CK V +A REM+ GIKP V
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY + + + KL +EMQ D TYN ++GLCK G + A L +
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGL 306
+ D YN L++G R + + + P +VAD+ +Y +++ L
Sbjct: 547 LNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 156/293 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P V++NT+I+G CK G +D+ L QM+ PDV TY++LI+ LC N + A
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF EM +G+ P+ V F ++ +NG++D M+ + ++P+ Y+TL++GFC
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G + A + M G + D ++Y LI+G+C+ +VE AL + +EM GI+ V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
++ L G+ + +V A + EM R + D TY +D CK G +L + +
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
+ YN L++GLCK G+++ A L ++ +V D +TYN ++ G
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 163/335 (48%)
Query: 30 GFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTF 89
GF+ A F + + + +L+ + N + E++D G +V F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 90 NVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMES 149
N++M++ CK G + +A ++ D + +R ++P +++TL++G+C G ++ L ME
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 150 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 209
+ D +Y+ LIN CK +++ A L+ EM +G+ P V + TL G +++
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 210 ALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLID 269
+ +++M + D YNT ++G CKNG +V A + + D Y LID
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
G C+ G +E ALE+ + + + + D V ++ ++ G+C +G++ A +M + P
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
+ + + ++ F + +LL +M+ +P
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%)
Query: 120 NAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 179
N + ++ LM+ FC G I+ A+++F + + VS+N LINGYCK ++E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 180 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKN 239
+M +P V TY+ L L + ++++ A LF+EM + + + + T I G +N
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
G I E ++ + + DI YN L++G CK+G L A + + RR L D +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
+I G C G ++ A ++ +M++N + + + F L+ G + + L +M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 360 KKVMPDASIVSMVVD 374
+ PD +M++D
Sbjct: 479 AGIKPDDVTYTMMMD 493
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 68/137 (49%)
Query: 240 GYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTY 299
G+I +A++ FR + ++ I+ L+D + K + + +V +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 300 NIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKE 359
NI+++ C +G + A +F ++ + ++ P V+ F TLI+G+ ++ + L H+M++
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 360 KKVMPDASIVSMVVDLL 376
+ PD S +++ L
Sbjct: 304 SRTRPDVFTYSALINAL 320
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 191/362 (52%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C P+ VTY +ID LC +D AK +F +MK PD VTY +L+ D + K
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+ + EM G P VVTF +++D LCK G EA LD+M + + PN TY+TL+ G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
+++ A ELFG+MES+G K +Y + I+ Y K+ + AL + +M +KGI P +
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
V N L + + A ++F ++ + D+ TYN + K G I EA++L
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQ 311
+ CE D+ N LI+ L K+ R++ A ++F + L VVTYN ++ GL +G+
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 312 MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSM 371
+ +A +LF M + PN I F TL + ++ + +++L KM + +PD +
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 372 VV 373
++
Sbjct: 649 II 650
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 181/352 (51%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ TY++++ GL K +D L +M+ + P+V T+ I L A NEA
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ M D+G P VVT+ V++D LC K+D A + + M +P+ TY TL+D F
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
++ ++ + ME G D V++ IL++ CK EA M +GI P +
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYNTL GL +H+++ AL+LF M+ V TY FID K+G V A+E F +
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+I A N + L K+GR A ++F L LV D VTYN+M+ G++
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
D+A L +M EN P+VI+ +LI+ + ++ + ++ +MKE K+ P
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 175/330 (53%), Gaps = 1/330 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ VT+ ++D LCK G +A M+ + I P++ TYN+LI GL + ++A L
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F M GV+P+ T+ V +D K+G A + M + + PN + +
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G+ A+++F ++ +G D V+YN+++ Y K E++EA+ L EM+ G +P V+
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
N+L L++ +V+ A K+F M+ + TYNT + GL KNG I EA+ELF +
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C + +N L D LCK+ + +AL++ + V DV TYN +I GL +GQ+
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
+A F M++ V P+ + TL+ G V+
Sbjct: 661 EAMCFFHQMKK-LVYPDFVTLCTLLPGVVK 689
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 176/327 (53%), Gaps = 4/327 (1%)
Query: 7 EIGVVCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHAND 66
++GV +P TYN +I GL + ++ A+ +FLQ+K PDV TYN L+ +
Sbjct: 778 DLGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 67 WNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLL-DLMVQRDVRPNAFTYS 125
+E L+ EM + + +T N+++ L K G +D+A L DLM RD P A TY
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 126 TLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 185
L+DG +G++ A++LF M GC+ + YNILING+ K E + A +L++ MV +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 186 GIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
G++P + TY+ L L + +V+ L F+E++ + D YN I+GL K+ + EA
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 246 VELFRTLGILK-CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIH 304
+ LF + + D+ YN LI L +G +E A +++ + R L +V T+N +I
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 305 GLCNDGQMDKAHDLFLDMEENAVAPNV 331
G G+ + A+ ++ M +PN
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 193/403 (47%), Gaps = 40/403 (9%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP VTYNT++ GL K G + +A LF M + P+ +T+N+L LC ++ A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ F+MMD G P V T+N I+ L KNG++ EA M ++ V P+ T TL+ G
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVV 688
Query: 133 LTGKINRA--------------------EELFGSMESMGCKHDDVSYN--ILING----- 165
I A E+L GS+ + + VS++ ++ NG
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 166 ----------YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
CK+ V A +L+ + G++P + TYN L GL E +E A +F
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 215 EEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKS 274
+++ D +TYN +D K+G I E EL++ + +CE + +N +I GL K+
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 275 GRLEIALELFRSL-PRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVII 333
G ++ AL+L+ L R TY +I GL G++ +A LF M + PN I
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 334 FVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ LI+GF + + L +M ++ V PD S++VD L
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 203/395 (51%), Gaps = 43/395 (10%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHA------- 64
C P+ TYNTII GL K G V +A F QMK + + PD VT +L+ G+ A
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 65 --------NDWNEAKRLFFE------MMDQGVQPSVVTFN--VIMDELCKNG-------- 100
N ++ LF+E + + G+ + V+F+ ++ + +C++G
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPII 756
Query: 101 ----KMDEAS--RLLDLMVQRD--VRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGC 152
K + S R L +D V+P TY+ L+ G I A+++F ++S GC
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 153 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 212
D +YN L++ Y K+ +++E LY+EM + + +T+N + GL + V+ AL
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 213 LFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGL 271
L+ ++ D D + TY IDGL K+G + EA +LF + C + YN LI+G
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 272 CKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNV 331
K+G + A LF+ + + + D+ TY++++ LC G++D+ F +++E+ + P+V
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 332 IIFVTLIHGFVRINKPSKVIELLHKMKEKK-VMPD 365
+ + +I+G + ++ + + L ++MK + + PD
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 3/359 (0%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQM-KGENINPDVVTYNSLIHGLCHANDWNE 69
+C+ II CK V A+ LF + K + P + TYN LI GL A+
Sbjct: 744 ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803
Query: 70 AKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMD 129
A+ +F ++ G P V T+N ++D K+GK+DE L M + N T++ ++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 130 GFCLTGKINRAEELFGS-MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 188
G G ++ A +L+ M +Y LI+G K+ + EA L+ M+ G +
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 189 PTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVEL 248
P YN L G + + + A LF+ M ++ V D TY+ +D LC G + E +
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 249 FRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP-RRVLVADVVTYNIMIHGLC 307
F+ L D+ YN +I+GL KS RLE AL LF + R + D+ TYN +I L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDA 366
G +++A ++ +++ + PNV F LI G+ KP + M P+
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 179/362 (49%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N +YN +I L K F +A ++ +M E P + TY+SL+ GL D + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLT 134
EM G++P+V TF + + L + GK++EA +L M P+ TY+ L+D C
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 135 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 194
K++ A+E+F M++ K D V+Y L++ + N++++ + EM G P VVT+
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 195 NTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGI 254
L L + A + M+ + + TYNT I GL + + +A+ELF +
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 255 LKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDK 314
L + Y ID KSG ALE F + + + ++V N ++ L G+ +
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 315 AHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
A +F +++ + P+ + + ++ + ++ + + I+LL +M E PD +V+ +++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 375 LL 376
L
Sbjct: 547 TL 548
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 180/366 (49%), Gaps = 6/366 (1%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
+ K +T TY TI L +G + +A +M+ + +YN LIH L + EA
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 207
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
++ M+ +G +PS+ T++ +M L K +D LL M ++PN +T++ +
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
GKIN A E+ M+ GC D V+Y +LI+ C ++++ A ++ +M + KP
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA---VE 247
VTY TL + ++ + + EM++D D T+ +D LCK G EA ++
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
+ R GIL ++ YN LI GL + RL+ ALELF ++ + TY + I
Sbjct: 388 VMRDQGILP---NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
G A + F M+ +APN++ ++ + + + ++ + +K+ ++PD+
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 368 IVSMVV 373
+M++
Sbjct: 505 TYNMMM 510
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 188/408 (46%), Gaps = 52/408 (12%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+P+ + N++I+ L K VD+A +F++MK + P VVTYN+L+ GL EA
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF M+ +G P+ +TFN + D LCKN ++ A ++L M+ P+ FTY+T++ G
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE----------------- 174
G++ A F M+ + D V+ L+ G K +E+
Sbjct: 654 VKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPA 712
Query: 175 -------------------ALSLYREMVSKGIKP-------TVVTYNTLFLGLFEIHQVE 208
A+S +V+ GI ++ Y+ + + V
Sbjct: 713 NLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC------KHNNVS 766
Query: 209 HALKLFEEMQRD-DVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCL 267
A LFE+ +D V TYN I GL + I A ++F + C D+ YN L
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 268 IDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLD-MEENA 326
+D KSG+++ EL++ + A+ +T+NI+I GL G +D A DL+ D M +
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 327 VAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
+P + LI G + + + +L M + P+ +I +++++
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 36/362 (9%)
Query: 49 PDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQ-GVQPSVVTFNVIMDELCKNGKMDEASR 107
PD+ + + GL D + + F + + + T N +++ L +GK++E +
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 108 LLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYC 167
+ DLM +R ++ + TY T+ + G + +A M G + SYN LI+
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 168 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTS 227
K++ EA+ +YR M+ +G +P++ TY++L +GL + ++ + L +EM+ + +
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 228 TYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELF--- 284
T+ I L + G I EA E+ + + C D+ Y LID LC + +L+ A E+F
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 285 ---RSLPRRVL-----------------------------VADVVTYNIMIHGLCNDGQM 312
R P RV V DVVT+ I++ LC G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+A D M + + PN+ + TLI G +R+++ +EL M+ V P A +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 373 VD 374
+D
Sbjct: 440 ID 441
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 37/255 (14%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQ-MKGENINPDVVTYNSLIHGLCHANDWNEA 70
C+ NT+T+N +I GL K G VD A L+ M + +P TY LI GL + EA
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
K+LF M+D G +P+ +N++++ K G+ D A L MV+ VRP+ TYS L+D
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----- 185
C+ G+++ F ++ G D V YN++ING K+ +EEAL L+ EM +
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 186 -------------------------------GIKPTVVTYNTLFLGLFEIHQVEHALKLF 214
G++P V T+N L G + EHA ++
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Query: 215 EEMQRDDVAADTSTY 229
+ M + +T TY
Sbjct: 1091 QTMVTGGFSPNTGTY 1105
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 1/187 (0%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+PN YN +I+G K G D A ALF +M E + PD+ TY+ L+ LC +E
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM-VQRDVRPNAFTYSTLMDG 130
F E+ + G+ P VV +N+I++ L K+ +++EA L + M R + P+ +TY++L+
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
+ G + A +++ ++ G + + ++N LI GY + + E A ++Y+ MV+ G P
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 191 VVTYNTL 197
TY L
Sbjct: 1102 TGTYEQL 1108
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ TY+ ++D LC G VD+ F ++K +NPDVV YN +I+GL ++ EA
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 73 LFFEM-MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF EM +G+ P + T+N ++ L G ++EA ++ + + + + PN FT++ L+ G+
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILIN 164
L+GK A ++ +M + G + +Y L N
Sbjct: 1078 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 1/239 (0%)
Query: 139 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTL 197
++ + GSM K D S + G + + + S ++ + + T T N +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
L ++E +F+ MQ+ + DT+TY T L G + +A R +
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
L+ +YN LI L KS A+E++R + + TY+ ++ GL +D
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
L +ME + PNV F I R K ++ E+L +M ++ PD ++++D L
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 198/377 (52%), Gaps = 20/377 (5%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
+ TY ++D CK G +++A+ F +M+ P+VVTY +LIH A + A LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 75 FEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV-QRDV---------------R 118
M+ +G P++VT++ ++D CK G++++A ++ + M +DV R
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 119 PNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 178
PN TY L+DGFC + ++ A +L +M GC+ + + Y+ LI+G CK +++EA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 179 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCK 238
EM G T+ TY++L F++ + + A K+ +M + A + Y IDGLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 239 NGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVT 298
G EA +L + + C+ ++ Y +IDG G++E LEL + + + + VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 299 YNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPS-KVIELLHKM 357
Y ++I C +G +D AH+L +M++ + + +I GF NK + + LL ++
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFIESLGLLDEI 873
Query: 358 KEKKVMPDASIVSMVVD 374
+ P S+ +++D
Sbjct: 874 GQDDTAPFLSVYRLLID 890
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 57/418 (13%)
Query: 14 PNTVTYNTIIDGLCKEG------FVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDW 67
P V YN +I +C + +D A+ + +M + + + +S LC A +
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
+A + EM+ QG P T++ +++ LC KM+ A L + M + + + +TY+ +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
+D FC G I +A + F M +GC + V+Y LI+ Y K K+V A L+ M+S+G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEM--------------QRDDVA--ADTSTYNT 231
P +VTY+ L G + QVE A ++FE M Q DD + + TY
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 232 FIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALEL-------- 283
+DG CK+ + EA +L + + CE + Y+ LIDGLCK G+L+ A E+
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 284 -------FRSLPRRVL--------------------VADVVTYNIMIHGLCNDGQMDKAH 316
+ SL R +VV Y MI GLC G+ D+A+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
L MEE PNV+ + +I GF I K +ELL +M K V P+ +++D
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 4/344 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+PN VTY ++DG CK V++A+ L M E P+ + Y++LI GLC +EA+
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ EM + G ++ T++ ++D K + D AS++L M++ PN Y+ ++DG C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GK + A +L ME GC+ + V+Y +I+G+ ++E L L M SKG+ P V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TY L + ++ A L EEM++ T+ Y I+G N +E++ L +
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEI 873
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLP--RRVLVADVVTYNIMIHGLCNDG 310
G + Y LID L K+ RLE+AL L + LV TYN +I LC
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELL 354
+++ A LF +M + V P + F +LI G R +K S+ + LL
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 22/385 (5%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+TV Y +I GLC+ ++A +M+ + P+VVTY++L+ G + KR+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
MM +G PS FN ++ C +G A +LL MV+ P Y+ L+ C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 134 TGK------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
++ AE+ + M + G + ++ + C + E+A S+ REM+ +G
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
P TY+ + L ++E A LFEEM+R + AD TY +D CK G I +A +
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
F + + C ++ Y LI K+ ++ A ELF ++ + ++VTY+ +I G C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 308 NDGQMDKAHDLF-----------LDM-----EENAVAPNVIIFVTLIHGFVRINKPSKVI 351
GQ++KA +F +DM ++N+ PNV+ + L+ GF + ++ +
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 352 ELLHKMKEKKVMPDASIVSMVVDLL 376
+LL M + P+ + ++D L
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 168/320 (52%), Gaps = 5/320 (1%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C+PN + Y+ +IDGLCK G +D+A+ + +M + TY+SLI + A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
++ +M++ P+VV + ++D LCK GK DEA +L+ +M ++ +PN TY+ ++DGF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
+ GKI EL M S G + V+Y +LI+ CKN ++ A +L EM
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
Y + G F +E +L L +E+ +DD A S Y ID L K + A+ L
Sbjct: 850 AGYRKVIEG-FNKEFIE-SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 252 LGILKCEL-DIQA-YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCND 309
+ L D + YN LI+ LC + ++E A +LF + ++ ++ ++ ++ +I GL +
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Query: 310 GQMDKAHDLFLDMEENAVAP 329
++ +A L LD + V P
Sbjct: 968 SKISEAL-LLLDFISHMVCP 986
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 11/369 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ TYN +I K +D A + +M N+ D T + LC W EA
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L + + P V + ++ LC+ +EA L+ M PN TYSTL+ G C
Sbjct: 292 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-C 347
Query: 133 LTGK-INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
L K + R + + M GC +N L++ YC + + A L ++MV G P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 192 VTYNTLFLGL------FEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEA 245
V YN L + ++ A K + EM V + ++F LC G +A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 246 VELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHG 305
+ R + D Y+ +++ LC + ++E+A LF + R LVADV TY IM+
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 306 LCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
C G +++A F +M E PNV+ + LIH +++ K S EL M + +P+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 366 ASIVSMVVD 374
S ++D
Sbjct: 588 IVTYSALID 596
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 9/329 (2%)
Query: 54 YNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMV 113
YN+L+ + +D + ++ D + NV++ + C+NG A L +
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 114 QRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 173
RP+ TY+ L+ F +++ A + M + D + CK +
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 174 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFI 233
EAL+L ++ P V Y L GL E E A+ M+ + TY+T +
Sbjct: 288 EALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 234 DGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLV 293
G + + + + C + +N L+ C SG A +L + + + +
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 294 ADVVTYNIMIHGLCNDGQ------MDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKP 347
V YNI+I +C D +D A + +M V N I + K
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 348 SKVIELLHKMKEKKVMPDASIVSMVVDLL 376
K ++ +M + +PD S S V++ L
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 35/397 (8%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ +TYNT+IDG CK G +K+ + +MK ++I P ++T+N+L+ GL A +A+ +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 74 FFEMMDQGVQPSVVTFNVIMD-----------------------------------ELCK 98
EM D G P TF+++ D LCK
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 99 NGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVS 158
GK+++A +L + + + PN Y+T++DG+C G + A +ME G K D ++
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 159 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQ 218
YN LI +C+ E+E A +M KG+ P+V TYN L G ++ + + +EM+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 219 RDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLE 278
+ + +Y T I+ LCK ++EA + R + ++ YN LIDG C G++E
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 279 IALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLI 338
A + + ++ + ++VTYN +I GL G++ +A DL L++ + P+V + +LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 339 HGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDL 375
G+ + I L +MK + P +++ L
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 184/362 (50%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P+ Y I K V K LF +MK + I P V YN LI GLC N+A++
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
LF EM+ + + PS++T+N ++D CK G +++ ++ + M + P+ T++TL+ G
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
G + AE + M+ +G D +++IL +GY N++ E AL +Y V G+K
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
T + L L + ++E A ++ + + YNT IDG C+ G +V A +
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+ D AYNCLI C+ G +E A + + + + V TYNI+I G +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
DK D+ +ME+N PNV+ + TLI+ + +K + + M+++ V P I +M+
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 373 VD 374
+D
Sbjct: 536 ID 537
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 4/360 (1%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN V YNT+IDG C++G + A+ M+ + + PD + YN LI C + A++
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M +GV PSV T+N+++ + + D+ +L M PN +Y TL++ C
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
K+ A+ + ME G YN+LI+G C ++E+A +EM+ KGI+ +VT
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
YNTL GL ++ A L E+ R + D TYN+ I G G + + L+ +
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
+ ++ Y+ LI LC +E+ LF + L D++ YN ++H G M+
Sbjct: 627 RSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDME 682
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
KA +L M E ++ + + +LI G +++ K +V L+ +M +++ P+A +++V
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 168/328 (51%), Gaps = 4/328 (1%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ TYN +I G ++ DK + +M+ P+VV+Y +LI+ LC + EA+ +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+M D+GV P V +N+++D C GK+++A R M+++ + N TY+TL+DG +
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
TGK++ AE+L + G K D +YN LI+GY V+ ++LY EM GIKPT+ T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y+ L + L +E +LF EM + D YN + +G + +A L + +
Sbjct: 637 YH-LLISLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
LD YN LI G K G+L L + R + + TYNI++ G C
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYM 752
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGF 341
A+ + +M+E +V I L+ G
Sbjct: 753 SAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 173/364 (47%), Gaps = 4/364 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+ + YN +I C+ G ++ A+ +MK + ++P V TYN LI G ++++
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
+ EM D G P+VV++ +++ LCK K+ EA + M R V P Y+ L+DG C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
GKI A M G + + V+YN LI+G ++ EA L E+ KG+KP V
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
TYN+L G V+ + L+EEM+R + TY+ I K G +E E R
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG--IELTE--RLF 656
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
G + + D+ YN ++ G +E A L + + + + D TYN +I G G++
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
+ L +M + P + ++ G + +M+EK + D I + +
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776
Query: 373 VDLL 376
V L
Sbjct: 777 VSGL 780
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 175/358 (48%), Gaps = 12/358 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P++ + ++D L K +FL + + P Y I +D + L
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F M + PSV +NV++D LCK +M++A +L D M+ R + P+ TY+TL+DG+C
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 134 TGKINRAEELFGSMESMGCKHDD---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
G E+ F E M H + +++N L+ G K VE+A ++ +EM G P
Sbjct: 262 AGN---PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF- 249
T++ LF G + E AL ++E V + T + ++ LCK G I +A E+
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 250 RTL--GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
R + G++ E+ YN +IDG C+ G L A ++ ++ + D + YN +I C
Sbjct: 379 REMAKGLVPNEV---IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPD 365
G+M+ A M+ V+P+V + LI G+ R + K ++L +M++ MP+
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 4/344 (1%)
Query: 32 VDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNV 91
+ +A LF ++ E I P + L+ L + +F +++ +PS +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 92 IMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMG 151
+ K + + L + M + P+ F Y+ L+DG C ++N AE+LF M +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 152 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 211
++YN LI+GYCK E++ + M + I+P+++T+NTL GLF+ VE A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 212 KLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNC--LID 269
+ +EM+ D T++ DG N A+ ++ T + + + AY C L++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET--AVDSGVKMNAYTCSILLN 362
Query: 270 GLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAP 329
LCK G++E A E+ + LV + V YN MI G C G + A ME+ + P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 330 NVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+ + + LI F + + + ++KMK K V P ++++
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 31/294 (10%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN V+Y T+I+ LCK + +A+ + M+ ++P V YN LI G C +A R
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM+ +G++ ++VT+N ++D L GK+ EA LL + ++ ++P+ FTY++L+ G+
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILI---------------------------NG- 165
G + R L+ M+ G K +Y++LI NG
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGV 671
Query: 166 ---YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDV 222
Y + ++E+A +L ++M+ K I TYN+L LG ++ ++ L +EM ++
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 223 AADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGR 276
+ TYN + G C+ + A +R + LD+ N L+ GL + R
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 33/235 (14%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLF 74
N VTYNT+IDGL G + +A+ L L++ + + PDV TYNSLI G A + L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 75 FEMMDQGVQPSVVTFNVIMDELCK--------------------------------NGKM 102
EM G++P++ T+++++ LC +G M
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 103 DEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNIL 162
++A L M+++ + + TY++L+ G GK+ L M + + + +YNI+
Sbjct: 682 EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Query: 163 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEM 217
+ G+C+ K+ A YREM KG V N L GL E + + A + EM
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 132/307 (42%), Gaps = 35/307 (11%)
Query: 68 NEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTL 127
+EA LFF + ++G+ PS + +++D L K + + +++ D RP+ F Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
+ + + ELF M KHD I
Sbjct: 186 IQAAVKLSDVGKGLELFNRM-----KHDR------------------------------I 210
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
P+V YN L GL + ++ A +LF+EM + TYNT IDG CK G ++ +
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 248 LFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLC 307
+ + E + +N L+ GL K+G +E A + + + V D T++I+ G
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 308 NDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDAS 367
++ + + A ++ ++ V N L++ + K K E+L + K ++P+
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 368 IVSMVVD 374
I + ++D
Sbjct: 391 IYNTMID 397
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 141 EELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 198
+ELF S+ S KHD SY +L ++K + EA L+ + ++GI P+ + L
Sbjct: 93 KELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLL 151
Query: 199 LGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCE 258
L + Q + +F + D Y I K + + +ELF + +
Sbjct: 152 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY 211
Query: 259 LDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDL 318
+ YN LIDGLCK R+ A +LF + R L+ ++TYN +I G C G +K+ +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 319 FLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
M+ + + P++I F TL+ G + +L +MK+ +PDA S++ D
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 110/240 (45%)
Query: 137 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 196
I+ A +LF ++ + G S +L++ K K+ ++++ ++ +P+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 197 LFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILK 256
++ V L+LF M+ D + YN IDGLCK + +A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 257 CELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAH 316
+ YN LIDG CK+G E + ++ + + ++T+N ++ GL G ++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 317 DLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
++ +M++ P+ F L G+ K + + + V +A S++++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 194/366 (53%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEA 70
VC P+ +T+ ++IDGL K G VD A ++ +M + + + Y SLI + +
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 71 KRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDG 130
+++ +M++Q P + N MD + K G+ ++ + + + R P+A +YS L+ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 131 FCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 190
G N ELF SM+ GC D +YNI+I+G+CK +V +A L EM +KG +PT
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 191 VVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFR 250
VVTY ++ GL +I +++ A LFEE + + + Y++ IDG K G I EA +
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 251 TLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDG 310
L ++ +N L+D L K+ + AL F+S+ + VTY I+I+GLC
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 311 QMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVS 370
+ +KA + +M++ + P+ I + T+I G + ++ L + K +PD++ +
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 371 MVVDLL 376
+++ L
Sbjct: 802 AMIEGL 807
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 196/363 (53%), Gaps = 1/363 (0%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ + YN I+ L K G VD+A +F +MK ++ P++ TYN LI LC A + A L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
M G+ P+V T N+++D LCK+ K+DEA + + M + P+ T+ +L+DG
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G+++ A +++ M C+ + + Y LI + + E+ +Y++M+++ P +
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
NT +F+ + E +FEE++ D +Y+ I GL K G+ E ELF ++
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
C LD +AYN +IDG CK G++ A +L + + VVTY +I GL ++D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A+ LF + + + NV+I+ +LI GF ++ + + +L ++ +K + P+ + ++
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 374 DLL 376
D L
Sbjct: 700 DAL 702
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 202/434 (46%), Gaps = 71/434 (16%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENIN------------------------ 48
+P + T+I G KEG VD A +L +MK +++
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 49 -----------PDVVTYNSLIHGLCHANDWNEAKRLF----------------------- 74
PD VTY S+I LC AN +EA +F
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 75 --------FEMMD----QGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF 122
+ +++ +G PSV+ +N I+ L K GK+DEA ++ + M ++D PN
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLS 378
Query: 123 TYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 182
TY+ L+D C GK++ A EL SM+ G + + NI+++ CK+++++EA +++ EM
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 183 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYI 242
K P +T+ +L GL ++ +V+ A K++E+M D ++ Y + I +G
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 243 VEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIM 302
+ ++++ + C D+Q N +D + K+G E +F + R V D +Y+I+
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 303 IHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKV 362
IHGL G ++ ++LF M+E + + +I GF + K +K +LL +MK K
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 363 MPDASIVSMVVDLL 376
P V+D L
Sbjct: 619 EPTVVTYGSVIDGL 632
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
PN TYN +ID LC+ G +D A L M+ + P+V T N ++ LC + +EA +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
F EM + P +TF ++D L K G++D+A ++ + M+ D R N+ Y++L+ F
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G+ +++ M + C D N ++ K E E+ +++ E+ ++ P +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y+ L GL + +LF M+ DT YN IDG CK G + +A +L +
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
E + Y +IDGL K RL+ A LF + + +VV Y+ +I G G++D
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVV 373
+A+ + ++ + + PN+ + +L+ V+ + ++ + MKE K P+ +++
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 374 DLL 376
+ L
Sbjct: 735 NGL 737
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 178/364 (48%), Gaps = 1/364 (0%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
+P Y T+I D LF QM+ P V + +LI G + A
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFC 132
L EM + +V +NV +D K GK+D A + + ++P+ TY++++ C
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 133 LTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 192
+++ A E+F +E +YN +I GY + +EA SL +KG P+V+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 193 TYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTL 252
YN + L ++ +V+ ALK+FEEM++ D A + STYN ID LC+ G + A EL ++
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 253 GILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQM 312
+++ N ++D LCKS +L+ A +F + +V D +T+ +I GL G++
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 313 DKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMV 372
D A+ ++ M ++ N I++ +LI F + ++ M + PD +++
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 373 VDLL 376
+D +
Sbjct: 524 MDCM 527
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 4/271 (1%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C +T YN +IDG CK G V+KA L +MK + P VVTY S+I GL + +EA
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
LF E + ++ +VV ++ ++D K G++DEA +L+ ++Q+ + PN +T+++L+D
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
+IN A F SM+ + C + V+Y ILING CK ++ +A ++EM +G+KP+
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
++Y T+ GL + + A LF+ + + D++ YN I+GL ++A LF
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Query: 252 LGILKCELDIQAYNC--LIDGLCKSGRLEIA 280
+ L I C L+D L K+ LE A
Sbjct: 823 --TRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 137/279 (49%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+ +Y+ +I GL K GF ++ LF MK + D YN +I G C N+A +L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
EM +G +P+VVT+ ++D L K ++DEA L + + + N YS+L+DGF
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G+I+ A + + G + ++N L++ K +E+ EAL ++ M P VT
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y L GL ++ + A ++EMQ+ + T +Y T I GL K G I EA LF
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
D YN +I+GL R A LF RR L
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 53 TYNSLIHGLCHANDWNEAKRLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLM 112
+YNSL+ + +++ ++ EM G PSV T ++ K K+ E ++ +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 113 VQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 172
+ RP Y+TL+ F + LF M+ +G + + LI G+ K V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 173 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTF 232
+ ALSL EM S + +V YN ++ +V+ A K F E++ + + D TY +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 233 IDGLCKNGYIVEAVELFRTLGILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVL 292
I LCK + EAVE+F L + AYN +I G +G+ + A L +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 293 VADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIE 352
+ V+ YN ++ L G++D+A +F +M+++A APN+ + LI R K E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE 398
Query: 353 LLHKMKEKKVMPDASIVSMVVDLL 376
L M++ + P+ V+++VD L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRL 422
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 34/374 (9%)
Query: 18 TYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEM 77
+YN+++ + + D + +M P V T ++ G AN E + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 78 MDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
+P+ + ++ D L M + P ++TL+ GF G++
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
+ A L M+S D V YN+ I+ + K +V+ A + E+ + G+KP VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELF---RTLG- 253
L + ++++ A+++FE ++++ T YNT I G G EA L R G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 254 ---------ILKC---------------------ELDIQAYNCLIDGLCKSGRLEIALEL 283
IL C ++ YN LID LC++G+L+ A EL
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 284 FRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVIIFVTLIHGFVR 343
S+ + L +V T NIM+ LC ++D+A +F +M+ P+ I F +LI G +
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 344 INKPSKVIELLHKM 357
+ + ++ KM
Sbjct: 460 VGRVDDAYKVYEKM 473
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 5/231 (2%)
Query: 137 INRAEELFGSMESMG-CKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
+NRA E F E H SYN +L+ C+N + + + EM G P+V T
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNT 135
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
+ LG + +++ + + M++ S Y T I + + LF+ +
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
L E + + LI G K GR++ AL L + L AD+V YN+ I G++D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
A F ++E N + P+ + + ++I + N+ + +E+ +++ + +P
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKR 72
KP+T++Y T+I GL K G + +A ALF + K PD YN++I GL + N +A
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 73 LFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEAS 106
LF E +G+ T V++D L KN +++A+
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 183/392 (46%), Gaps = 39/392 (9%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
C PN T+ ++DGL K+G A+ +F M G I+P+ VTY LI GLC ++A+
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR 253
Query: 72 RLFFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGF 131
+LF+EM G P V N ++D CK G+M EA LL L + YS+L+DG
Sbjct: 254 KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313
Query: 132 CLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 191
+ +A EL+ +M K D + Y ILI G K ++E+AL L M SKGI P
Sbjct: 314 FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373
Query: 192 VTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRT 251
YN + L +E L EM + D T+ I +C+NG + EA E+F
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 252 LGILKCELDIQAYNCLIDGLCKSGRLEIA------------------------------- 280
+ C + +N LIDGLCKSG L+ A
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 281 -----LELFRSLPRRVLVA---DVVTYNIMIHGLCNDGQMDKAHDLFLDMEENAVAPNVI 332
L+ +R L D+V+YN++I+G C G +D A L ++ ++P+ +
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 333 IFVTLIHGFVRINKPSKVIELLHKMKEKKVMP 364
+ TLI+G R+ + + +L + + + P
Sbjct: 554 TYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 171/345 (49%), Gaps = 1/345 (0%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNE-AKRL 73
++ + +I K G +KA F +MK + PDV TYN ++ + + A +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCL 133
+ EM+ P++ TF ++MD L K G+ +A ++ D M R + PN TY+ L+ G C
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 134 TGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 193
G + A +LF M++ G D V++N L++G+CK + EA L R G +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 194 YNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLG 253
Y++L GLF + A +L+ M + ++ D Y I GL K G I +A++L ++
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 254 ILKCELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMD 313
D YN +I LC G LE L + D T+ I+I +C +G +
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 314 KAHDLFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMK 358
+A ++F ++E++ +P+V F LI G + + + LLHKM+
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 160/347 (46%), Gaps = 44/347 (12%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRL 73
P+T YN +I LC G +++ ++L L+M PD T+ LI +C EA+ +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 74 FFEMMDQGVQPSVVTFNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAF------TYSTL 127
F E+ G PSV TFN ++D LCK+G++ EA LL M RP + + +
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRS 488
Query: 128 MDGFCLTGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 187
D +G I +A G D VSYN+LING+C+ +++ AL L + KG+
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 188 KPTVVTYNTLFLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVE 247
P VTYNTL GL + + E A KLF +DD + Y + + C+ ++ A
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFN 606
Query: 248 LF-RTLGILKC---------------------------------ELDIQAYNCLIDGLCK 273
L+ + L + C EL + Y + GLC+
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQ 666
Query: 274 SGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFL 320
SGR AL +F L + ++ + +IHGLC Q+D A ++FL
Sbjct: 667 SGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL 713
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 166/357 (46%), Gaps = 1/357 (0%)
Query: 19 YNTIIDGLCKEGFVDKAKALFLQMKGENINPDVVTYNSLIHGLCHANDWNEAKRLFFEMM 78
+ +ID L ++ D ++K ++ D + LI +A F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 79 DQGVQPSVVTFNVIMDELCKNGKMDE-ASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKI 137
+ +P V T+NVI+ + + A + + M++ + PN +T+ LMDG G+
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 138 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 197
+ A+++F M G + V+Y ILI+G C+ ++A L+ EM + G P V +N L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 198 FLGLFEIHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKC 257
G ++ ++ A +L ++D Y++ IDGL + +A EL+ +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 258 ELDIQAYNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHD 317
+ DI Y LI GL K+G++E AL+L S+P + + D YN +I LC G +++
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 318 LFLDMEENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVD 374
L L+M E P+ LI R + E+ ++++ P + + ++D
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 89 FNVIMDELCKNGKMDEASRLLDLMVQRDVRPNAFTYSTLMDGFCLTGKINRAEELFGSME 148
F +++D L ++ D + L+ + V +++ + L+ + G +A E FG M+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 149 SMGCKHDDVSYNILINGYCKNKEVEE-----ALSLYREMVSKGIKPTVVTYNTLFLGLFE 203
C+ D +YN+++ + EE A ++Y EM+ P + T+ L GL++
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 204 IHQVEHALKLFEEMQRDDVAADTSTYNTFIDGLCKNGYIVEAVELFRTLGILKCELDIQA 263
+ A K+F++M ++ + TY I GLC+ G +A +LF + D A
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 264 YNCLIDGLCKSGRLEIALELFRSLPRRVLVADVVTYNIMIHGLCNDGQMDKAHDLFLDME 323
+N L+DG CK GR+ A EL R + V + Y+ +I GL + +A +L+ +M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 324 ENAVAPNVIIFVTLIHGFVRINKPSKVIELLHKMKEKKVMPDASIVSMVVDLL 376
+ + P++I++ LI G + K ++LL M K + PD + V+ L
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKALF--LQMKGENINPDVVTYNSLIHGLCHANDWNEAK 71
P+ V+YN +I+G C+ G +D A L LQ+KG ++PD VTYN+LI+GL EA
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG--LSPDSVTYNTLINGLHRVGREEEAF 572
Query: 72 RLFFEMMDQGVQPSV---------------VTFNVIMDELCKNGKMD------------- 103
+LF+ D P+V V FN+ M L K +D
Sbjct: 573 KLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE 632
Query: 104 -EASRLLDLMVQRDVRPNAFT---YSTLMDGFCLTGKINRAEELFGSMESMGCKHDDVSY 159
E R L +++ D R + T Y+ + G C +G+ + A +F + S
Sbjct: 633 GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSC 692
Query: 160 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE-IHQVEHALKLFEEMQ 218
LI+G CK ++++ A+ ++ + K N L L E ++E +L M+
Sbjct: 693 VKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRME 752
Query: 219 RDDVAADT 226
R D+
Sbjct: 753 RAGYNVDS 760
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,928,150
Number of Sequences: 539616
Number of extensions: 5545549
Number of successful extensions: 25869
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 14366
Number of HSP's gapped (non-prelim): 3514
length of query: 376
length of database: 191,569,459
effective HSP length: 119
effective length of query: 257
effective length of database: 127,355,155
effective search space: 32730274835
effective search space used: 32730274835
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)