BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042043
MPELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQLDNVSLPEGKTVDELDL
TPRLFGVSIGAKCARREEEEEQNQLQQQQGENEPGSDVKSEPLDANNDHHQEPPWLELGK
S

High Scoring Gene Products

Symbol, full name Information P value
AT-HSFB2B protein from Arabidopsis thaliana 3.5e-20
HSFB2A
AT5G62020
protein from Arabidopsis thaliana 1.3e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042043
        (121 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2139792 - symbol:AT-HSFB2B species:3702 "Arabi...   144  3.5e-20   2
TAIR|locus:2174043 - symbol:HSFB2A "AT5G62020" species:37...   144  1.3e-09   1


>TAIR|locus:2139792 [details] [associations]
            symbol:AT-HSFB2B species:3702 "Arabidopsis thaliana"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            InterPro:IPR000232 Pfam:PF00447 PRINTS:PR00056 PROSITE:PS00434
            SMART:SM00415 GO:GO:0005634 GO:GO:0045892 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0010200
            EMBL:AL161532 EMBL:AL049500 KO:K09419 eggNOG:COG5169
            HOGENOM:HOG000242480 EMBL:AY093206 EMBL:BT008471 EMBL:AJ251868
            IPI:IPI00522065 PIR:T04213 RefSeq:NP_192903.1 UniGene:At.24995
            ProteinModelPortal:Q9T0D3 SMR:Q9T0D3 STRING:Q9T0D3 PRIDE:Q9T0D3
            EnsemblPlants:AT4G11660.1 GeneID:826771 KEGG:ath:AT4G11660
            GeneFarm:4072 TAIR:At4g11660 InParanoid:Q9T0D3 OMA:AAAPIPM
            PhylomeDB:Q9T0D3 ProtClustDB:CLSN2713543 Genevestigator:Q9T0D3
            GermOnline:AT4G11660 Uniprot:Q9T0D3
        Length = 377

 Score = 144 (55.7 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
 Identities = 31/58 (53%), Positives = 40/58 (68%)

Query:     2 PELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQLDNVSL-PEGKTVDEL 58
             PEL+ ENE+LRK+N +L  E+++LKGL  NI  LM N+  GQ D   L PEGK +D L
Sbjct:   227 PELVEENERLRKDNERLRKEMTKLKGLYANIYTLMANFTPGQEDCAHLLPEGKPLDLL 284

 Score = 123 (48.4 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
 Identities = 30/68 (44%), Positives = 34/68 (50%)

Query:    59 DLTPRLFGVSIGAKCARRXXXXXXXXXX------XXXXXXXPGSDVKSEPLDANNDHHQE 112
             DLTPRLFGVSIG K ARR                         SDVK+EP++ NN  +  
Sbjct:   310 DLTPRLFGVSIGVKRARREEELGAAEEEDDDRREAAAQEGEQSSDVKAEPMEENNSGNHN 369

Query:   113 PPWLELGK 120
               WLELGK
Sbjct:   370 GSWLELGK 377


>TAIR|locus:2174043 [details] [associations]
            symbol:HSFB2A "AT5G62020" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
            "respiratory burst involved in defense response" evidence=RCA]
            [GO:0035556 "intracellular signal transduction" evidence=RCA]
            InterPro:IPR000232 Pfam:PF00447 PRINTS:PR00056 PROSITE:PS00434
            SMART:SM00415 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0006950 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0010200 EMBL:AB016880
            KO:K09419 eggNOG:COG5169 EMBL:AJ251867 EMBL:BT008542 EMBL:BT008658
            EMBL:AK229690 IPI:IPI00529436 RefSeq:NP_201008.2 UniGene:At.5973
            ProteinModelPortal:Q9SCW4 SMR:Q9SCW4 STRING:Q9SCW4
            EnsemblPlants:AT5G62020.1 GeneID:836322 KEGG:ath:AT5G62020
            GeneFarm:4071 TAIR:At5g62020 HOGENOM:HOG000242480 InParanoid:Q9SCW4
            OMA:KSICDNI PhylomeDB:Q9SCW4 ProtClustDB:CLSN2918427
            Genevestigator:Q9SCW4 GermOnline:AT5G62020 Uniprot:Q9SCW4
        Length = 299

 Score = 144 (55.7 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query:     3 ELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQ-LDNVSLPEGKTVDELDLT 61
             ELL ENEKLR +N QLN EL+Q+K +C+NI +LM+NY   Q  D    P G +   ++  
Sbjct:   174 ELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQPTDRSYSPGGSSSQPMEFL 233

Query:    62 P 62
             P
Sbjct:   234 P 234


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.132   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      121       104   0.00091  102 3  11 23  0.38    31
                                                     29  0.50    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  113 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.06u 0.11s 11.17t   Elapsed:  00:00:00
  Total cpu time:  11.06u 0.11s 11.17t   Elapsed:  00:00:00
  Start:  Mon May 20 19:07:41 2013   End:  Mon May 20 19:07:41 2013

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