BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042043
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0D3|HFB2B_ARATH Heat stress transcription factor B-2b OS=Arabidopsis thaliana
GN=HSFB2B PE=2 SV=1
Length = 377
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 85/153 (55%), Gaps = 36/153 (23%)
Query: 2 PELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQLDNVS-LPEGKTVDEL-- 58
PEL+ ENE+LRK+N +L E+++LKGL NI LM N+ GQ D LPEGK +D L
Sbjct: 227 PELVEENERLRKDNERLRKEMTKLKGLYANIYTLMANFTPGQEDCAHLLPEGKPLDLLPE 286
Query: 59 -----------------------DLTPRLFGVSIGAKCARR--------EEEEEQNQLQQ 87
DLTPRLFGVSIG K ARR EE++++ +
Sbjct: 287 RQEMSEAIMASEIETGIGLKLGEDLTPRLFGVSIGVKRARREEELGAAEEEDDDRREAAA 346
Query: 88 QQGENEPGSDVKSEPLDANNDHHQEPPWLELGK 120
Q+GE SDVK+EP++ NN + WLELGK
Sbjct: 347 QEGEQ--SSDVKAEPMEENNSGNHNGSWLELGK 377
>sp|Q9SCW4|HFB2A_ARATH Heat stress transcription factor B-2a OS=Arabidopsis thaliana
GN=HSFB2A PE=2 SV=1
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 61/133 (45%), Gaps = 36/133 (27%)
Query: 3 ELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQ-LDNVSLPEGKTVDELDL- 60
ELL ENEKLR +N QLN EL+Q+K +C+NI +LM+NY Q D P G + ++
Sbjct: 174 ELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQPTDRSYSPGGSSSQPMEFL 233
Query: 61 ----------------TPRLFGVSIGAKCARREEEEEQNQLQQQQGENEPGSDVKSEPLD 104
+PRLFGV IG K R E G VK+ +
Sbjct: 234 PAKRFSEMEIEEEEEASPRLFGVPIGLKRTRSE-----------------GVQVKTTAVV 276
Query: 105 ANNDHHQEPPWLE 117
N +E PWL
Sbjct: 277 GENS-DEETPWLR 288
>sp|Q6Z9C8|HFB2B_ORYSJ Heat stress transcription factor B-2b OS=Oryza sativa subsp.
japonica GN=HSFB2B PE=2 SV=1
Length = 390
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 62/141 (43%), Gaps = 53/141 (37%)
Query: 7 ENEKLRKENAQLNNELSQLKGLCNNILALMTNYASG-QLDN------------------- 46
ENE+LR+ENAQL ELSQ++ LCNNIL LM+ YAS QLD
Sbjct: 211 ENERLRRENAQLARELSQMRKLCNNILLLMSKYASTQQLDAANASSAAGNNNNNNCSGES 270
Query: 47 ----VSLPEGKTVDELDLTP-------------------RLFGVSIGAKCARREEEEEQN 83
LP +D + P +LFGVSIG K R +
Sbjct: 271 AEAATPLPLPAVLDLMPSCPGAASAAAPVSDNEEGMMSAKLFGVSIGRKRMRHD------ 324
Query: 84 QLQQQQGENEPGSDVKSEPLD 104
G+++ + VK+EP+D
Sbjct: 325 ----GGGDDDHAATVKAEPMD 341
>sp|Q652B0|HFB2C_ORYSJ Heat stress transcription factor B-2c OS=Oryza sativa subsp.
japonica GN=HSFB2C PE=2 SV=1
Length = 454
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 43/143 (30%)
Query: 7 ENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQ----------LDNVSLPEGKTVD 56
ENE+LR+ENA+L EL +K LCNNIL LM+ YA+ Q + N S + V
Sbjct: 221 ENERLRRENARLTRELGHMKKLCNNILLLMSKYAATQHVEGSAGISSIANCSGESSEAVP 280
Query: 57 E--------LDLTP------------------------RLFGVSIGAKCARREEEEEQNQ 84
LDL P RLFGVSIG K R + ++
Sbjct: 281 PPPPLPPAILDLMPSCPALATAAAAAGLAIDGEPDPSARLFGVSIGLKRTRDDAAAAADE 340
Query: 85 LQQQQGENEP-GSDVKSEPLDAN 106
+ + E G+DVK E D +
Sbjct: 341 DGGGEDQAEHGGADVKPEAADPH 363
>sp|Q7XRX3|HFB2A_ORYSJ Heat stress transcription factor B-2a OS=Oryza sativa subsp.
japonica GN=HSFB2A PE=2 SV=2
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 1 MPELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQLDNVSLPEGKTVDELDL 60
+ EL EN +LR+ENA+L EL++ + +C+ + L++ Y D+ + E D+
Sbjct: 154 VAELEEENARLRRENARLARELARARRVCDGVRRLVSRY-----DHDHGGGEEEAGEGDV 208
Query: 61 TPRLFGVSIGAK 72
P LFGV+IG K
Sbjct: 209 KPMLFGVAIGGK 220
>sp|P22335|HSF24_SOLPE Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2
SV=1
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 1 MPELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYASGQLDNV------SLPEGKT 54
+L ENEKL+K+N L++EL Q K CN ++A ++ Y D + P G +
Sbjct: 152 FTDLSDENEKLKKDNQMLSSELVQAKKQCNELVAFLSQYVKVAPDMINRIMSQGTPSGSS 211
Query: 55 VDEL 58
++EL
Sbjct: 212 LEEL 215
>sp|Q67U94|HFB4C_ORYSJ Heat stress transcription factor B-4c OS=Oryza sativa subsp.
japonica GN=HSFB4C PE=2 SV=1
Length = 394
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 4 LLGENEKLRKENAQLNNELSQLKGLCNNILALMTNYA 40
L+ ENE+LR+ N L EL+ ++ L N+I+ + N+
Sbjct: 212 LMEENERLRRSNTALLQELAHMRKLYNDIIYFVQNHV 248
>sp|Q9C635|HSFB4_ARATH Heat stress transcription factor B-4 OS=Arabidopsis thaliana
GN=HSFB4 PE=2 SV=1
Length = 348
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 7 ENEKLRKENAQLNNELSQLKGLCNNILALMTNYA 40
+NE+LR+ N L +EL+ +K L N+I+ + N+
Sbjct: 199 DNERLRRSNTVLMSELAHMKKLYNDIIYFVQNHV 232
>sp|P0C6F3|R1A_BEV Replicase polyprotein 1a OS=Berne virus GN=1a PE=1 SV=1
Length = 4569
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 32 ILALMTNYASGQLDNVSLPEGKTVDELDLTPRLFGVSIG--------AKCARREEEEEQN 83
+L LM + L ++LP + L L+P G S+ A CARREE+ +N
Sbjct: 202 LLNLMKMSSVVDLSPLTLPNTRLW--LKLSPFHGGTSVSYATQIKGYANCARREEKCLKN 259
Query: 84 QLQQQQGENEPGS-DVKS 100
+L ++Q E GS D +S
Sbjct: 260 RLTKKQKNQEKGSFDARS 277
>sp|P0C6V7|R1AB_BEV Replicase polyprotein 1ab OS=Berne virus GN=rep PE=1 SV=1
Length = 6857
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 32 ILALMTNYASGQLDNVSLPEGKTVDELDLTPRLFGVSIG--------AKCARREEEEEQN 83
+L LM + L ++LP + L L+P G S+ A CARREE+ +N
Sbjct: 202 LLNLMKMSSVVDLSPLTLPNTRLW--LKLSPFHGGTSVSYATQIKGYANCARREEKCLKN 259
Query: 84 QLQQQQGENEPGS-DVKS 100
+L ++Q E GS D +S
Sbjct: 260 RLTKKQKNQEKGSFDARS 277
>sp|Q67TP9|HSFB1_ORYSJ Heat stress transcription factor B-1 OS=Oryza sativa subsp.
japonica GN=HSFB1 PE=2 SV=1
Length = 302
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 3 ELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNY 39
++ ENE+LRK+N L EL++ + C +L ++ +
Sbjct: 172 DITSENEQLRKDNQTLTMELARARRHCEELLGFLSRF 208
>sp|Q7XHZ0|HFB4B_ORYSJ Heat stress transcription factor B-4b OS=Oryza sativa subsp.
japonica GN=HSFB4B PE=2 SV=1
Length = 310
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 7 ENEKLRKENAQLNNELSQLKGLCNNILALMTNY 39
+N +LR+ N+ L +EL+ +K L N+I+ + N+
Sbjct: 192 DNRQLRRRNSLLLSELAHMKKLYNDIIYFLQNH 224
>sp|Q96320|HSFB1_ARATH Heat stress transcription factor B-1 OS=Arabidopsis thaliana
GN=HSFB1 PE=2 SV=2
Length = 284
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 1 MPELLGENEKLRKENAQLNNELSQLKGLCNNILALMTNY 39
+ +L GENEKL++EN L++EL+ K + ++ +T +
Sbjct: 153 VADLSGENEKLKRENNNLSSELAAAKKQRDELVTFLTGH 191
>sp|Q9FKW2|C3H61_ARATH Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis
thaliana GN=At5g44260 PE=2 SV=1
Length = 381
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 98 VKSEPLDANNDHHQEPPWLELG 119
+ S L +N+ HH+ PPWL++G
Sbjct: 275 IASSNLSSNHHHHRLPPWLDVG 296
>sp|C5DSC5|ETT1_ZYGRC Enhancer of translation termination 1 OS=Zygosaccharomyces rouxii
(strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 /
NRRL Y-229) GN=ETT1 PE=3 SV=1
Length = 411
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 14 ENAQLNNELSQLKGLCNNIL 33
ENA L++EL+QLKGL NN
Sbjct: 46 ENADLDDELTQLKGLWNNYF 65
>sp|O02755|CEBPB_BOVIN CCAAT/enhancer-binding protein beta OS=Bos taurus GN=CEBPB PE=3
SV=1
Length = 348
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 3 ELLGENEKLRKENAQLNNELSQLKGLCNNI 32
EL GENE+L+K+ QL+ E+S L+ L +
Sbjct: 308 ELTGENERLQKKVEQLSREVSTLRNLFKTL 337
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.128 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,745,962
Number of Sequences: 539616
Number of extensions: 1908907
Number of successful extensions: 8847
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 8621
Number of HSP's gapped (non-prelim): 261
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)