Query 042046
Match_columns 687
No_of_seqs 196 out of 502
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 13:27:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042046hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2344 Exocyst component prot 100.0 9E-100 2E-104 858.8 52.4 533 81-657 45-616 (623)
2 PF03081 Exo70: Exo70 exocyst 100.0 8.9E-75 1.9E-79 632.8 30.1 354 292-652 1-371 (371)
3 PF06419 COG6: Conserved oligo 99.5 2.9E-09 6.4E-14 123.4 47.0 525 27-649 41-618 (618)
4 PF04129 Vps52: Vps52 / Sac2 f 98.9 1.9E-05 4.2E-10 89.9 40.0 415 22-518 12-486 (508)
5 KOG3758 Uncharacterized conser 98.9 3.7E-05 7.9E-10 85.5 39.5 515 40-649 84-651 (655)
6 KOG1961 Vacuolar sorting prote 98.7 0.00077 1.7E-08 74.8 43.3 400 27-516 78-550 (683)
7 PF09763 Sec3_C: Exocyst compl 98.6 0.0032 7E-08 74.9 46.2 539 22-622 28-693 (701)
8 KOG2604 Subunit of cis-Golgi t 97.1 0.91 2E-05 52.2 35.9 142 19-204 97-240 (733)
9 PF04136 Sec34: Sec34-like fam 96.8 0.022 4.7E-07 54.7 13.0 122 48-205 28-150 (157)
10 PF10191 COG7: Golgi complex c 96.6 2.6 5.7E-05 50.7 34.5 131 233-382 201-335 (766)
11 KOG2148 Exocyst protein Sec3 [ 95.5 6.3 0.00014 45.2 37.0 211 394-624 607-838 (867)
12 PF04124 Dor1: Dor1-like famil 74.7 1.3E+02 0.0028 32.5 16.6 22 250-271 193-214 (338)
13 PF10475 DUF2450: Protein of u 69.0 81 0.0018 33.3 13.0 35 73-107 106-140 (291)
14 PF04100 Vps53_N: Vps53-like, 64.4 2.3E+02 0.005 31.3 25.6 75 48-122 71-145 (383)
15 KOG0994 Extracellular matrix g 61.7 1.2E+02 0.0027 37.6 13.3 14 112-125 1665-1678(1758)
16 PRK10807 paraquat-inducible pr 56.9 69 0.0015 37.2 10.4 75 17-96 413-493 (547)
17 PF07393 Sec10: Exocyst comple 50.4 5.2E+02 0.011 31.0 26.1 79 232-320 128-217 (710)
18 PF05377 FlaC_arch: Flagella a 43.7 29 0.00063 27.1 3.1 48 50-100 2-49 (55)
19 PF07426 Dynactin_p22: Dynacti 38.9 2.8E+02 0.0062 27.0 10.0 17 188-204 140-156 (174)
20 COG2733 Predicted membrane pro 38.5 2.8E+02 0.006 30.6 10.6 90 539-652 291-384 (415)
21 PF11172 DUF2959: Protein of u 38.4 4.1E+02 0.0089 26.6 10.9 26 16-41 20-45 (201)
22 PLN02939 transferase, transfer 35.0 1E+03 0.022 29.9 17.5 57 22-78 238-294 (977)
23 KOG3821 Heparin sulfate cell s 34.3 35 0.00076 38.8 3.2 73 568-654 95-168 (563)
24 KOG2196 Nuclear porin [Nuclear 34.2 3.3E+02 0.0071 28.0 9.7 81 16-99 119-205 (254)
25 PHA01746 hypothetical protein 34.1 16 0.00035 32.3 0.5 22 617-644 76-97 (131)
26 PF15264 TSSC4: Tumour suppres 30.8 16 0.00035 33.1 -0.1 20 627-646 54-73 (115)
27 PF14932 HAUS-augmin3: HAUS au 29.5 6.1E+02 0.013 26.3 11.4 115 15-132 66-191 (256)
28 KOG1916 Nuclear protein, conta 26.8 3.9E+02 0.0084 32.8 9.9 50 570-622 1014-1065(1283)
29 PF11887 DUF3407: Protein of u 24.4 3E+02 0.0065 28.8 8.0 78 20-97 13-91 (267)
30 PF06825 HSBP1: Heat shock fac 24.3 92 0.002 24.3 3.1 39 28-69 11-49 (54)
31 PF10805 DUF2730: Protein of u 22.4 2.5E+02 0.0054 25.0 6.0 64 27-90 21-86 (106)
32 TIGR00996 Mtu_fam_mce virulenc 21.7 3.1E+02 0.0067 28.7 7.7 48 48-95 178-225 (291)
33 PF12718 Tropomyosin_1: Tropom 21.3 3.1E+02 0.0067 25.8 6.7 25 18-42 43-67 (143)
34 KOG4117 Heat shock factor bind 21.2 71 0.0015 25.6 1.9 37 28-67 24-60 (73)
35 PF10158 LOH1CR12: Tumour supp 20.4 3.8E+02 0.0083 24.9 6.9 38 67-104 89-126 (131)
No 1
>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.4e-100 Score=858.84 Aligned_cols=533 Identities=35% Similarity=0.579 Sum_probs=470.2
Q ss_pred HHHhhhhHHHHHHHhhhhhc---ccccc-ccCCCCChhhHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccH
Q 042046 81 INRAVGPAAAVLKVFDAVHG---LEKSL-LSDPRNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADE 156 (687)
Q Consensus 81 I~~tl~~~~~vl~~~~~~~~---~e~~i-~~gp~~~l~~Yl~al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~ 156 (687)
++.++..++++++.|...-. ....+ ...++.++..|+++++.|++++.++.+.++ . ++
T Consensus 45 ~~~~i~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~e~~~~~~~v~~l~~~l~~l~s~~~-----------------~-~~ 106 (623)
T KOG2344|consen 45 KEATIEQAEEIIEKFLTALNLRSSSKIISFLESREEAKNFLSAVNTLQETLQFLVSQNG-----------------L-QS 106 (623)
T ss_pred HHhhhhhHHHHHHHHhhhcccchhhhhhhccCChHHHHHHHHHHHHHHHHHHHHHhcCC-----------------c-ch
Confidence 56666666677776665542 22222 234578999999999999999999986543 1 11
Q ss_pred HHHHHHHHhhhhhhhcccchhhhhhhHhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--------------C--C---
Q 042046 157 KYLLNLKKSLKGLRELENGEVEIRLDGGLLDAALDKLESDFRKLLTENSVPLPMSSPST--------------L--G--- 217 (687)
Q Consensus 157 ~~~~~v~~~~~~l~~~~~~~~~~~~~~~Ll~~a~~~Le~eF~~lL~~~s~p~~~~~~~~--------------~--~--- 217 (687)
.+.++ .++..+++.||.+||+||+.+|..++.+++|..+.. . +
T Consensus 107 ---------~~~~~---------~~~d~l~~~am~~le~EF~~il~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (623)
T KOG2344|consen 107 ---------SKLLK---------AQADSLLQIAMSRLEKEFRQILENNREELDPERLSVRLRSSLNSKDEEASLNSDSKY 168 (623)
T ss_pred ---------hhhHH---------HhHHHHHHHHHHHHHHHHHHHHHhcccccchHhhhhcccccccccccccccccCccc
Confidence 11111 122259999999999999999999999988753320 0 0
Q ss_pred ---------cCCcCCCCCCCHHHHHHHHHHHHHHHhCCCchHHHHHHHHhhhHHHHHHHHhcchhhhhhhhhhhhhhhhh
Q 042046 218 ---------QQACIAPSPLPVSVIHKLQAILGRLIANNRFDKCISVYVEVRSSNVRASLQALDLDYLEISIAEFNDVQSI 288 (687)
Q Consensus 218 ---------~~~~~~~~~l~~~~l~~L~~Ia~~l~~~g~~~e~~~~Y~~~R~~~l~~sL~~L~~~~~~~~~~~~~~~~~~ 288 (687)
......++.+|++++.+|+.||++|+++||.++|+++|..+|+..+.++|..||.+++++...+.++|+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~v~~dLk~Ia~~mi~~gy~~eC~~~Y~~vrk~i~~e~l~~L~~e~ls~~~vq~~~we~l 248 (623)
T KOG2344|consen 169 SALSDEESFGDDEIEPDLFPPDVMTDLKAIAQRMIAAGYEKECFKVYKSIRKSILDESLVNLGVEKLSIEDVQRMDWEVL 248 (623)
T ss_pred ccccccccccCceeeccCCCchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhcCeeeccHHHHhhccHHHH
Confidence 00113357899999999999999999999999999999999999999999999999999888889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhHHHHHHhHHHHHHHHHhHHHHhhccCChhhhhhhhhHHHH
Q 042046 289 EGYIAQWGRHLEFAVKHLFEAEYNLCNDVFERMGKDIWMGCFAKIAAQAGMLAFLQFGKTVTESKKDPIKLLKLLDIFAS 368 (687)
Q Consensus 289 e~~i~~w~~al~~av~~l~~~E~~L~~~vf~~~~~~~~~~~f~~i~~~~~i~~Ll~f~~~v~~~~~~~~klf~lLdm~~~ 368 (687)
+..|.+|+++++++++.||++|+.||++||++.....+ .||.+|+.. ++++||+|+++|+.++++|+|+|++||||++
T Consensus 249 e~~I~~Wi~~~kv~v~~lf~~E~~Lcd~If~~~~~~~~-~cF~eI~~~-~~~~ll~F~eava~~kr~pEklf~iLd~y~~ 326 (623)
T KOG2344|consen 249 EGKIKKWIKAVKVAVSVLFEGEKKLCDQIFSDLESIVE-SCFPEIVKE-AALQLLSFPEAVAISKRSPEKLFKLLDLYET 326 (623)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccchHHH-HHHHHHHHH-HHHHhhccchheeeccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998665555 999999955 5789999999999999999999999999999
Q ss_pred HHhhHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCccccchHHHHHHHHHhhcCCcH
Q 042046 369 LNKLRTDFNRLFGGAACVEIQNLTRDLINRVINGAAEIFGELLTQVELQRQIPPPPDGSVPRLVSFITEYCNKLLGDDYK 448 (687)
Q Consensus 369 L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~l~~~~~~~f~e~~~~i~~~~~~~~p~dg~Vh~lT~~vm~yl~~L~~~~y~ 448 (687)
+.+++|+++++|++..|.+++.++..++++|+++++++|.||+..|+.+.++++++||||||||+||||||+.|+ +|+
T Consensus 327 i~~l~p~ie~lF~~~~~s~vr~~~~~~~~rL~~~~~~~~~efe~~I~~d~sk~pv~gG~VHpLTryvmnyl~~L~--dy~ 404 (623)
T KOG2344|consen 327 IVELRPDIERLFSDASCSEVRSQALSLLKRLGEGVRSIFVEFESAIRKDSSKTPVPGGGVHPLTRYVMNYLNFLA--DYK 404 (623)
T ss_pred HHHHHHHHHHhccCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcChhHHHHHHHHHHHH--HHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHhhhc----CCCc---chhhhchHHHHHHHHHHHHHHHHHHHHhhCCCccchhhhhhhhHHHHHHhhccCCchh
Q 042046 449 PVLTQVLVIHR----SWKH---EKFQEKLLVNEVLKIVKAIEQNLETWLKAYDDTTLSHFFAMNNHCHLYKSLKGTKLGD 521 (687)
Q Consensus 449 ~~l~~ll~~~~----~w~~---~~~~~~~l~~~i~~ii~~L~~nLe~ksk~y~d~aL~~iFLmNN~~yI~~~v~~S~L~~ 521 (687)
++|.++|..+. .+.+ .....++++.++.|||..|+.||++||+.|+|++|++||||||++||++++++++|+.
T Consensus 405 ~tL~~il~~~~~~~~~~~~~~~~~~~~s~l~~~~~~ii~~L~~nLd~Ks~~Y~D~aL~~lFlmNN~~yiv~kvkss~L~~ 484 (623)
T KOG2344|consen 405 DTLEQLLMEDPVDTSLPKSESEDESSNSLLAVHIARIILALECNLDTKSKLYKDPALSYLFLMNNLHYIVQKVKSSELRL 484 (623)
T ss_pred HHHHHHHhccccccccCcccccccccccHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHHHhhHHHHHHHHhcchHHH
Confidence 99999998743 2222 1234478999999999999999999999999999999999999999999999999999
Q ss_pred hhCchHHHHHHHHHHHHHHhHHHhhhhhhhhccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhcccccccChHH
Q 042046 522 LLGDSWLREHEQYKDYYSTIFFRDSWGKIPSHLSREGLIMFSGGRASARDLVKKRLKAFNDALDDVYKKQSNWVILDKDL 601 (687)
Q Consensus 522 lLg~~~~~~~~~~~~~~~~~Y~~~sW~~vl~~L~~~~~~~~~~~~~~~r~~iKekfk~FN~~Fee~~~~q~~w~VpD~~L 601 (687)
+||++|+++|..++++|++.|+|++|++|+++|.+++. ++++ .++|+.+||||++||++|||+|++|++|+||||+|
T Consensus 485 llGd~wl~kh~~~~~qy~~~Y~r~sW~~vl~~L~~~~s--~~~~-~~~~~~~Kerfk~FN~~FeEv~k~Qs~wvV~D~~L 561 (623)
T KOG2344|consen 485 LLGDDWLRKHEEKLRQYATSYERESWGKVLSLLTDEGS--SSGG-KKSKEVLKERFKLFNEQFEEVYKKQSQWVVPDPKL 561 (623)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--cccc-ccCHHHHHHHHHHHHHHHHHHHHhhCceecccHHH
Confidence 99999999999999999999999999999999998862 1222 48999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCHHHHHHHHhhhcCCCC
Q 042046 602 REKTSQLITQAIAPIYRSYMQNYGALVEQEASSGKYAKYTVETLEKMLGSLFQPKP 657 (687)
Q Consensus 602 R~~Lr~~i~~~V~PaY~~F~~ry~~~~e~~k~~~KYiKYtpe~le~~L~~LF~g~~ 657 (687)
|+.||.+|+++|+|+|++||+||++.+ .+|||+|||||||+|||++|++||+|++
T Consensus 562 r~eLk~si~~~v~P~Yr~F~~r~~~~~-~~k~~~kyikYtpedlE~~L~dLF~g~~ 616 (623)
T KOG2344|consen 562 REELKISISEKVVPAYRSFYGRYRNSV-SGKNPEKYIKYTPEDLENYLSDLFEGSP 616 (623)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCcccccCHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998665 4899999999999999999999999997
No 2
>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex. First discovered in Saccharomyces cerevisiae [], Exo70 and other exocyst proteins have been observed in several other eukaryotes, including humans. In S. cerevisiae, the exocyst complex is involved in the late stages of exocytosis, and is localized at the tip of the bud, the major site of exocytosis in yeast []. Exo70 interacts with the Rho3 GTPase []. This interaction mediates one of the three known functions of Rho3 in cell polarity: vesicle docking and fusion with the plasma membrane (the other two functions are regulation of actin polarity and transport of exocytic vesicles from the mother cell to the bud) []. In humans, the functions of Exo70 and the exocyst complex are less well characterised: Exo70 is expressed in several tissues and is thought to also be involved in exocytosis [].; GO: 0006887 exocytosis, 0000145 exocyst; PDB: 2PFV_A 2B7M_B 2B1E_A 2PFT_A.
Probab=100.00 E-value=8.9e-75 Score=632.82 Aligned_cols=354 Identities=32% Similarity=0.600 Sum_probs=314.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhHHHHHHhHHHHHHHHHhHHHHh---hccCChhhhhhhhhHHHH
Q 042046 292 IAQWGRHLEFAVKHLFEAEYNLCNDVFERMGKDIWMGCFAKIAAQAGMLAFLQFGKTVT---ESKKDPIKLLKLLDIFAS 368 (687)
Q Consensus 292 i~~w~~al~~av~~l~~~E~~L~~~vf~~~~~~~~~~~f~~i~~~~~i~~Ll~f~~~v~---~~~~~~~klf~lLdm~~~ 368 (687)
|.+|++++.+++.+|+++|++||++||+. .+..+..||.+++ +.++..|++|+++|+ ...++|+++|.+||||++
T Consensus 1 ~~~wi~~~~~~~~~l~~~E~~L~~~vf~~-~~~~~~~~f~~i~-~~~~~~ll~~~~~v~~~~~~~~~~~~lf~ll~~~~~ 78 (371)
T PF03081_consen 1 IKRWIQAYKVALKKLFQSERRLCDQVFPE-SSSIADECFAEIA-KPPLLQLLNFADAVASVRNSQRSPEKLFELLDMYEA 78 (371)
T ss_dssp T-SHHHHHHHHHHHHHHHHHHHHHHHSSC-CCTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCHCCHTCCCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhcCC-CcccHHHHHHHHH-HHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHH
Confidence 56899999999999999999999999998 4455889999999 678999999999998 788999999999999999
Q ss_pred HHhhHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCCCCCCCccccchHHHHHHHHHhhcCC
Q 042046 369 LNKLRTDFNRLFGGAACVEIQNLTRDLINRVINGAAEIFGELLTQVEL--QRQIPPPPDGSVPRLVSFITEYCNKLLGDD 446 (687)
Q Consensus 369 L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~l~~~~~~~f~e~~~~i~~--~~~~~~p~dg~Vh~lT~~vm~yl~~L~~~~ 446 (687)
|.++.|+++.+|.|.++..++.++.+++++|+++++++|.+|.+.|.. +....+|+||+|||+|++||+||++|+ +
T Consensus 79 l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~e~~~~i~~~~~~~~~~p~dg~Vh~lT~~vm~yl~~L~--~ 156 (371)
T PF03081_consen 79 LSELLPDLDSLFSGESCESIRQEFDELLKKLREAIRKILEEFEESIKNDSDSSSSVPSDGGVHPLTSYVMNYLKRLA--E 156 (371)
T ss_dssp HHHHHCCCHHCTCC-S-HHHHTHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGCS-TTS---HHHHHHHHHHHHHH--C
T ss_pred HHHHhHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCcchHHHHHHHHHHHHH--H
Confidence 999999999999998888999999999999999999999999999998 666788999999999999999999999 9
Q ss_pred cHHHHHHHHhhh--cCCCcchh----------hhchHHHHHHHHHHHHHHHHHHHHhhCCCccchhhhhhhhHHHHHHhh
Q 042046 447 YKPVLTQVLVIH--RSWKHEKF----------QEKLLVNEVLKIVKAIEQNLETWLKAYDDTTLSHFFAMNNHCHLYKSL 514 (687)
Q Consensus 447 y~~~l~~ll~~~--~~w~~~~~----------~~~~l~~~i~~ii~~L~~nLe~ksk~y~d~aL~~iFLmNN~~yI~~~v 514 (687)
|+++++.+|... ++|.++.. +.++++.||.++|++|+.|||+||+.|+|++|++||||||+|||.+.+
T Consensus 157 y~~~l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~ks~~y~d~~l~~iFLlNN~~yI~~~~ 236 (371)
T PF03081_consen 157 YRDTLESILQSDGDGNWLSESGPPSESSSSTDSQSSLSSYIADIISALESNLEAKSKSYKDPALRYIFLLNNYHYILKKL 236 (371)
T ss_dssp THHHHHHCCCTT-GGGGS-SS--GGGS---CCHHHHHHHHHHHHHHHHHHHHHHHHCCHCTHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhccccccccccccccccccccCccchHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHh
Confidence 999999999984 45544322 557899999999999999999999999999999999999999999999
Q ss_pred ccCCchhhhCchHHHHHHHHHHHHHHhHHHhhhhhhhhccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 042046 515 KGTKLGDLLGDSWLREHEQYKDYYSTIFFRDSWGKIPSHLSREGLIMFSGGRASARDLVKKRLKAFNDALDDVYKKQSNW 594 (687)
Q Consensus 515 ~~S~L~~lLg~~~~~~~~~~~~~~~~~Y~~~sW~~vl~~L~~~~~~~~~~~~~~~r~~iKekfk~FN~~Fee~~~~q~~w 594 (687)
++|+|..+||++|.+++..++++|++.|++.+|+||+++|.+++....++++.++|+.+|+||++||++|||+|+.|+.|
T Consensus 237 ~~s~l~~~lg~~~~~~~~~~~~~~~~~Y~~~sW~~v~~~L~~~~~~~~~~~~~~~~~~~ke~f~~Fn~~fee~~~~q~~~ 316 (371)
T PF03081_consen 237 KRSELKDLLGDDWEQRLSSKIEQYIKSYLRSSWGPVLSCLSDDSSSSGGKLSSKERELLKEKFKKFNSAFEEIYKAQKTW 316 (371)
T ss_dssp CTSHHHHCCTTCHHHHHHHHHHHHHHHHHCHHHHHHHCTCCHHCC-T-SSS-HHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred hhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCccHHHHHHHHHHHHHHHHHHHHcCcce
Confidence 99999999999999999999999999999888999999999864333345568999999999999999999999999999
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCHHHHHHHHhhh
Q 042046 595 VILDKDLREKTSQLITQAIAPIYRSYMQNYGALVEQEASSGKYAKYTVETLEKMLGSL 652 (687)
Q Consensus 595 ~VpD~~LR~~Lr~~i~~~V~PaY~~F~~ry~~~~e~~k~~~KYiKYtpe~le~~L~~L 652 (687)
+||||+||++||.+|.++|+|+|++||+||+. ..| ||+|||||||++||++|++|
T Consensus 317 ~vpD~~LR~~Lr~~i~~~v~p~Y~~F~~~~~~-~~~--~~~Kyikyt~~~le~~l~~L 371 (371)
T PF03081_consen 317 KVPDPELREELRREIKEKVVPAYRRFYERYRN-SQF--NPEKYIKYTPEDLENMLNEL 371 (371)
T ss_dssp --S-HHHHHHHHHHHHHHHHHHHHHHHHHCCC-CSS--SHCCC-SS-HHHHHHHHHTC
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc--CCCCCCccCHHHHHHHHHcC
Confidence 99999999999999999999999999999985 555 99999999999999999986
No 3
>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation.
Probab=99.47 E-value=2.9e-09 Score=123.39 Aligned_cols=525 Identities=15% Similarity=0.197 Sum_probs=300.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhccccccc
Q 042046 27 KALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLL 106 (687)
Q Consensus 27 ~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~i~ 106 (687)
..+.+.|.+....-+.|. .....+.++|........++..++..|+.-.+.|+.=-..+...++.|.-....+..|.
T Consensus 41 ~~v~~~l~~~~~~v~~l~---~~~~~~~~~l~~~~~~t~~ll~~~~~L~~~~~~~~~k~~ll~~f~~~f~Ls~~E~~~L~ 117 (618)
T PF06419_consen 41 SPVNRQLKRLQSDVDKLN---SSCDQMQDRLSAAKSETSDLLEEASELREQKEELELKKKLLDAFLERFTLSEEEEDALT 117 (618)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 334444544444444455 89999999999999999999999999999999999999999999999999998888888
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccchhhhhhhHhHH
Q 042046 107 SDPRNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGEVEIRLDGGLL 186 (687)
Q Consensus 107 ~gp~~~l~~Yl~al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~Ll 186 (687)
.|...==+.|..+|+|+++ +..+|. +|-...++. ++-..|......+
T Consensus 118 ~~~~~v~~~FF~~L~r~~~----I~~~c~-----------~LL~~~~~~------------------ag~~iM~~~~~~~ 164 (618)
T PF06419_consen 118 SGEEPVDDEFFDALDRVQK----IHEDCK-----------ILLSTENQR------------------AGLEIMEQMSKYL 164 (618)
T ss_pred CCCCCCCHHHHHHHHHHHH----HHHHHH-----------HHhCCCCch------------------HHHHHHHHHHHHH
Confidence 8832223678888888776 444443 112111111 1112334455777
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcCCcCCCCCCCHHHHHHHHHHHHHHHhCCCchHHHHHHHHhhhHHHHHH
Q 042046 187 DAALDKLESDFRKLLTENSVPLPMSSPSTLGQQACIAPSPLPVSVIHKLQAILGRLIANNRFDKCISVYVEVRSSNVRAS 266 (687)
Q Consensus 187 ~~a~~~Le~eF~~lL~~~s~p~~~~~~~~~~~~~~~~~~~l~~~~l~~L~~Ia~~l~~~g~~~e~~~~Y~~~R~~~l~~s 266 (687)
+.|.+||-.....-..... . +. +..++..-.-|+.+.++. .+-+.|++.|+..|+..+.+.
T Consensus 165 e~a~erl~~w~q~e~~~l~----~------~~------~~~~~~l~~al~~L~~rp---~lf~~~l~~~~~~R~~~l~~~ 225 (618)
T PF06419_consen 165 ERAYERLYRWVQRECRSLN----L------DN------PEVSPLLRRALRYLRERP---VLFNYCLDEFAEARSKALLRR 225 (618)
T ss_pred HHHHHHHHHHHHHHHhhhh----h------cC------cccchHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHHHHHH
Confidence 7787777555433333221 0 00 111222223333333322 345789999999998777654
Q ss_pred H-Hhcchhhh------hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChh---------------
Q 042046 267 L-QALDLDYL------EISIAEFNDVQSIEGYIAQWGRHLEFAVKHLFEAEYNLCNDVFERMGKD--------------- 324 (687)
Q Consensus 267 L-~~L~~~~~------~~~~~~~~~~~~~e~~i~~w~~al~~av~~l~~~E~~L~~~vf~~~~~~--------------- 324 (687)
. ..|..... ++.....++...+ +.|-.|+ .-.+++|+.++..+|..-...
T Consensus 226 F~~aLt~g~~~~~~~rPIel~AhDP~RYv-GDmLAwv-------Hq~~a~E~E~l~~Lf~~~~~~~~~~~~~~~~~~~~~ 297 (618)
T PF06419_consen 226 FLDALTRGGPGGSPSRPIELHAHDPLRYV-GDMLAWV-------HQAIASEREFLESLFKFDEDEIAEGSSSGFDSNPWS 297 (618)
T ss_pred HHHHHcCCCCCCCCCCchhhhccChHHHH-HHHHHHH-------HHHhhhHHHHHHHHhcccccccccccccccccccch
Confidence 4 55532211 1100011222222 3455776 444689999999999752211
Q ss_pred --hhhhH----HHHHHhHHHHHHHHHhHHHHhhccCChh---hhhhhhhHHHHHHhhHHHHHhhhCCcchHHHHHHHHHH
Q 042046 325 --IWMGC----FAKIAAQAGMLAFLQFGKTVTESKKDPI---KLLKLLDIFASLNKLRTDFNRLFGGAACVEIQNLTRDL 395 (687)
Q Consensus 325 --~~~~~----f~~i~~~~~i~~Ll~f~~~v~~~~~~~~---klf~lLdm~~~L~~l~p~~~~lf~~~~~~~~~~~~~~~ 395 (687)
....+ |..++. |+- .-.+.|-....+|. ++..+|..|... |..+.+..+ .+...
T Consensus 298 ~~~~~~lld~i~~~l~r--plk---~RvEQvi~se~~~i~~yki~~LL~fY~~~------~~k~i~~~s------~L~~t 360 (618)
T PF06419_consen 298 EELINELLDRILEGLCR--PLK---IRVEQVISSEEDPITLYKIANLLSFYQMT------FSKLIGEDS------SLIET 360 (618)
T ss_pred HHHHHHHHHHHHHHHhH--HHH---HHHHHHHHcCCCccHHHHHHHHHHHHHHH------HHHHcCCCc------hHHHH
Confidence 11122 233321 111 11222223334444 667777777643 333332222 24556
Q ss_pred HHHHHHHHHHHHHHHH----HHHhhhcCCCCCCCCccccchHHHHHHHHHhhcCCcHHHHHHHHhhhcCCCcchhhh--c
Q 042046 396 INRVINGAAEIFGELL----TQVELQRQIPPPPDGSVPRLVSFITEYCNKLLGDDYKPVLTQVLVIHRSWKHEKFQE--K 469 (687)
Q Consensus 396 l~~l~~~~~~~f~e~~----~~i~~~~~~~~p~dg~Vh~lT~~vm~yl~~L~~~~y~~~l~~ll~~~~~w~~~~~~~--~ 469 (687)
+..|.+.|.+.|...+ ..+......++|+|=..++.....++-|+.++. .|.. +..+.+..+ .
T Consensus 361 l~~L~~~a~~~f~~~l~~~~~~l~~~~~~~~~~DL~PP~~l~d~l~~L~~il~-~~~~----------s~~~~~~~~~~~ 429 (618)
T PF06419_consen 361 LKELQDLAQKKFFSSLRDHVAKLLRSAPEPPPADLSPPEWLIDFLSLLREILD-VYDS----------SLSPDDDRENDN 429 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHH-Hhhc----------ccCCccchhhhh
Confidence 6666666666555543 334433234566777777666666666555552 1221 111111122 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCccchhhhhhhhHHHHHHhhccCCchhhhCchHHHHHHHHHHH--------HHHh
Q 042046 470 LLVNEVLKIVKAIEQNLETWLKAYDDTTLSHFFAMNNHCHLYKSLKGTKLGDLLGDSWLREHEQYKDY--------YSTI 541 (687)
Q Consensus 470 ~l~~~i~~ii~~L~~nLe~ksk~y~d~aL~~iFLmNN~~yI~~~v~~S~L~~lLg~~~~~~~~~~~~~--------~~~~ 541 (687)
.+...+..+|+-+....+.-|....++.-..||++|...+|...+..-+.-. .+...+...++. ....
T Consensus 430 ~~~~Il~~~idpll~~c~~~a~~L~~~~~~~if~iNCl~~i~s~L~~~~~~~----~~~e~L~~~id~~~~~Lv~~Q~~~ 505 (618)
T PF06419_consen 430 DFKPILDEPIDPLLQMCQKSASPLAPKDDRAIFMINCLDLIQSTLSPFEFTS----ERVEELQDQIDAHVDTLVEEQASF 505 (618)
T ss_pred HHHHHHHHHhHHHHHHHHHHhhccCChhhhHHHHHHhHHHHHHHccChHhHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777788888888888888888777776579999999999998887533211 333333333333 2233
Q ss_pred HHHh-hhhhhhhccc----ccc-ccccCCCChhhHHHHHHHHHHHHHHHHHH-HHhccc-ccccChHHHHHHHHHHHHHH
Q 042046 542 FFRD-SWGKIPSHLS----REG-LIMFSGGRASARDLVKKRLKAFNDALDDV-YKKQSN-WVILDKDLREKTSQLITQAI 613 (687)
Q Consensus 542 Y~~~-sW~~vl~~L~----~~~-~~~~~~~~~~~r~~iKekfk~FN~~Fee~-~~~q~~-w~VpD~~LR~~Lr~~i~~~V 613 (687)
++.. .-+++...+. +.+ ..+-+.....+.+.++.-...|+.-+--. .-.+.. -.+.+|.+|+.++......+
T Consensus 506 lL~~sGL~~~~~~l~~i~~~~~~~~pls~~p~~~~~~l~~a~~kld~fL~sa~~d~~~~L~~L~Sp~l~~~I~~~a~~~f 585 (618)
T PF06419_consen 506 LLERSGLGDLYNALNMIFFDYDMYGPLSENPGMDPDSLSNALQKLDDFLPSALTDAQPNLFKLQSPKLRDDIRERAFERF 585 (618)
T ss_pred HHHHCCcHHHHHHHHhhccCCcccCCcccCccCCHHHHHHHHHHHHHHHcccchhhhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3321 2345555554 211 11111112345555554444444443221 122333 45889999999999999999
Q ss_pred HHHHHHHHHHhccccccccCCCcccccCHHHHHHHH
Q 042046 614 APIYRSYMQNYGALVEQEASSGKYAKYTVETLEKML 649 (687)
Q Consensus 614 ~PaY~~F~~ry~~~~e~~k~~~KYiKYtpe~le~~L 649 (687)
+-+|..||+...+ ...+-+.-..+||++|..+|
T Consensus 586 ~~~Y~~v~~~v~d---~~n~y~sl~~~tpeeI~~LL 618 (618)
T PF06419_consen 586 CKAYEKVYEAVMD---PDNGYESLFPRTPEEIRTLL 618 (618)
T ss_pred HHHHHHHHHHHhC---hhcccccccCCCHHHHhhcC
Confidence 9999999999853 22221135689999998764
No 4
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=98.91 E-value=1.9e-05 Score=89.87 Aligned_cols=415 Identities=16% Similarity=0.197 Sum_probs=240.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhcc
Q 042046 22 LISARKALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGL 101 (687)
Q Consensus 22 ~~A~~~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~ 101 (687)
...++..|...+...+.+-..|. ..|.+|+..|+.+...|.-++.+...++..=+|-..+...+..+++..-...++
T Consensus 12 e~~~~~~Lh~~i~~cd~~L~~le---~~L~~Fq~~L~~iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i~~i~ipP~l 88 (508)
T PF04129_consen 12 ESENFADLHNQIQECDSILESLE---EMLSNFQNDLGSISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFIDDIVIPPDL 88 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHH
Confidence 45677888888888888888899 999999999999999999999999999999999999999999999999999998
Q ss_pred ccccccCCCCChhhHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccchhhhhh
Q 042046 102 EKSLLSDPRNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGEVEIRL 181 (687)
Q Consensus 102 e~~i~~gp~~~l~~Yl~al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~ 181 (687)
-..|..||-++ .|+..+.++..-..++..+.. ..+. ++.+.++ ..
T Consensus 89 I~~I~~~~v~e--~~~~~~~~~~~k~~~~~~~~~-----------------~~~~-------~a~~d~~---------~~ 133 (508)
T PF04129_consen 89 IRSICEGPVNE--QYIEELLELLKKKIFFSKDQS-----------------FKDS-------KAIKDVK---------PE 133 (508)
T ss_pred HHhHhcCCCCH--HHHHHHHHHHHHHHHHHhhcc-----------------cccc-------cchHHHH---------HH
Confidence 88889888554 777776555554444432211 0110 0111111 11
Q ss_pred hHhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcCCcCCCCCCCHHHHHHHHHHHHHHHhCCC--chHHHHHHHHhh
Q 042046 182 DGGLLDAALDKLESDFRKLLTENSVPLPMSSPSTLGQQACIAPSPLPVSVIHKLQAILGRLIANNR--FDKCISVYVEVR 259 (687)
Q Consensus 182 ~~~Ll~~a~~~Le~eF~~lL~~~s~p~~~~~~~~~~~~~~~~~~~l~~~~l~~L~~Ia~~l~~~g~--~~e~~~~Y~~~R 259 (687)
...|-.+|+.|+-+.|-..+..-+.|.... .+....+-.-+.+..+|..++. ..|+.++|++.=
T Consensus 134 Le~L~~ka~~rir~fl~~kI~~lr~~~tn~--------------q~iQ~~LLk~~~~~~FL~~~~~~~a~El~~~Yv~tM 199 (508)
T PF04129_consen 134 LEKLKNKAVERIRDFLLKKIKSLRKPKTNS--------------QIIQQVLLKYKELFQFLKKHSPELAKELRQAYVETM 199 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCch--------------HHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 236777999999999999999887764211 2222344455666666765543 256666666433
Q ss_pred hHHH----H---HHHHhcchhhhhhh-----------------------------hhhhhhh---h--------------
Q 042046 260 SSNV----R---ASLQALDLDYLEIS-----------------------------IAEFNDV---Q-------------- 286 (687)
Q Consensus 260 ~~~l----~---~sL~~L~~~~~~~~-----------------------------~~~~~~~---~-------------- 286 (687)
+.+. . .+|..|..+..... .+...++ +
T Consensus 200 ~~~Y~~~F~~Y~~~L~kl~~~~~~~~~dL~g~~~~~~~~~~s~~~~~~~~~~~Fslg~R~~iL~~~~~~p~i~~~~a~~~ 279 (508)
T PF04129_consen 200 SWYYSSYFKRYIRSLEKLQLRIIDSKDDLIGVEDSSKGGFFSSKSSLKNRSSVFSLGRRIDILNSELDAPIIVPQIAEDN 279 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccCCCccccccccCCCcccccchhhhhhhHHHHHHhhcccCCccccchhhcc
Confidence 2221 1 22222211100000 0000000 0
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhHHHHHHhHHHHHHHHHhHHHHhhccCChhhhhhh
Q 042046 287 ----SIEGYIAQWGRHLEFAVKHLFEAEYNLCNDVFERMGKDIWMGCFAKIAAQAGMLAFLQFGKTVTESKKDPIKLLKL 362 (687)
Q Consensus 287 ----~~e~~i~~w~~al~~av~~l~~~E~~L~~~vf~~~~~~~~~~~f~~i~~~~~i~~Ll~f~~~v~~~~~~~~klf~l 362 (687)
..|..+.+|..++ .--..+|+..|.+-|.. +......+|..|- .+++..+..|.+.......++.-++.
T Consensus 280 ~~k~~~E~iFRS~~~~L----~Dn~t~Ey~F~~~FF~~-~~~~~~~if~~If-~~t~~~~~~~~~~~l~~~~D~iglll- 352 (508)
T PF04129_consen 280 SQKYPIEEIFRSLNKAL----IDNATSEYLFISEFFSG-SGDAAEDIFNQIF-EPTFSLLQEFTEQLLSNSYDAIGLLL- 352 (508)
T ss_pred cccCCHHHHHHHHHHHH----HHhhhHHHHHHHHHHcc-cccchHHHHHHHH-HHHHHHHHHHHHHHHHcCCcHHHHHH-
Confidence 1233455554444 55567899999999976 2334456677776 33444444666554323233333333
Q ss_pred hhHHHHHHhhHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCCCCccccchHHHHHHHHH
Q 042046 363 LDIFASLNKLRTDFNRLFGGAACVEIQNLTRDLINRVINGAAEIFGELLTQVELQRQ-IPPPPDGSVPRLVSFITEYCNK 441 (687)
Q Consensus 363 Ldm~~~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~l~~~~~~~f~e~~~~i~~~~~-~~~p~dg~Vh~lT~~vm~yl~~ 441 (687)
|..-....+-.+.+ .+.+ -+..-+..+...|=-....++..=.+.++.-.. ...+.+.+.|++|+---.|+..
T Consensus 353 --~Irl~~~~~~~~~~--R~ip--~ld~y~~~~~~~LWprF~~i~d~nieSlk~~~~~~~~~~~~~PH~itrRyaef~~s 426 (508)
T PF04129_consen 353 --CIRLNQRYQFEMQR--RRIP--VLDSYLNSLLMLLWPRFQKIMDANIESLKKADPKKLGSIDTRPHYITRRYAEFLSS 426 (508)
T ss_pred --HHHHHHHHHHHHHh--CCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCccCChHHHHHHHHHHHH
Confidence 33333333322211 1111 111222222222222233333333344443222 2334777889888875555444
Q ss_pred hhcCCcHHHHHHHHhhhcCCCcchhhhchHHHHHHHHHHHHHHHHHHHHhhCCCccchhhhhhhhHHHHHHhhccCC
Q 042046 442 LLGDDYKPVLTQVLVIHRSWKHEKFQEKLLVNEVLKIVKAIEQNLETWLKAYDDTTLSHFFAMNNHCHLYKSLKGTK 518 (687)
Q Consensus 442 L~~~~y~~~l~~ll~~~~~w~~~~~~~~~l~~~i~~ii~~L~~nLe~ksk~y~d~aL~~iFLmNN~~yI~~~v~~S~ 518 (687)
|. .+-.. . ++..+...+..+-..+..-|..-|+..+++..+.+||.||+.+|+..+....
T Consensus 427 ll---------~L~~~---~-----~~~~~~~~l~~L~~~~~~ll~~~s~~~~~~k~~~iFLiNNY~lIl~iL~~~~ 486 (508)
T PF04129_consen 427 LL---------KLSSE---H-----PDEQLEPSLNRLRREVEDLLTRLSKEFKDRKEREIFLINNYDLILSILSERT 486 (508)
T ss_pred HH---------HHhcc---C-----chhhHHHHHHHHHHHHHHHHHHHHHhcccccccceehHHHHHHHHHHHHhcc
Confidence 33 11111 1 1112444455555555555566677788888899999999999998887643
No 5
>KOG3758 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.89 E-value=3.7e-05 Score=85.46 Aligned_cols=515 Identities=15% Similarity=0.176 Sum_probs=252.7
Q ss_pred HHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhcccccccc-CCCCChhhHHH
Q 042046 40 ALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLS-DPRNDLPGYLS 118 (687)
Q Consensus 40 ~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~i~~-gp~~~l~~Yl~ 118 (687)
..++.++.+..+++...+++-=.+---+...|..++.-..-|+.-..-++..++.|.-.++.-..|.. ||-. ..|-.
T Consensus 84 ~e~v~km~~t~~~l~s~ls~~k~~t~dli~~t~~l~~e~~~le~r~kii~~Fl~~fqLs~~E~~~L~~~g~i~--e~FF~ 161 (655)
T KOG3758|consen 84 SEDVEKMANTCDKLKSNLSTSKATTQDLIQKTETLKEEAAQLELRKKIINAFLDNFQLSSEELDLLTESGPID--EDFFK 161 (655)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccChHHHHHHhcCCcch--HHHHH
Confidence 33344444666666665555444444566778888888888888888888888888877765555554 4521 34666
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccchhhhhhhHhHHHHHHHHHHHHHH
Q 042046 119 VLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGEVEIRLDGGLLDAALDKLESDFR 198 (687)
Q Consensus 119 al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~Ll~~a~~~Le~eF~ 198 (687)
+++|.++ +..||+.- -.. ..+.+ +.+.|.-.....+.|.++| |+
T Consensus 162 vL~rvqe----Ih~~~~~L-----------l~~-~~~~A-----------------g~eime~M~~~~E~a~erl---~r 205 (655)
T KOG3758|consen 162 VLDRVQE----IHDNCRLL-----------LQT-PNQTA-----------------GLEIMEKMALIQEGAYERL---FR 205 (655)
T ss_pred HHHHHHH----HHHHHHHH-----------Hhc-cchhh-----------------HHHHHHHHHHHHHHHHHHH---HH
Confidence 6666555 23333211 110 00111 1112222223444444443 33
Q ss_pred HHHhhcCCCCCCCCCCCCCcCCcCCCCCCCHHHHHHHHHHHHHHHhCCC-chHHHHHHHHhhhHHH-HHHHHhc--chh-
Q 042046 199 KLLTENSVPLPMSSPSTLGQQACIAPSPLPVSVIHKLQAILGRLIANNR-FDKCISVYVEVRSSNV-RASLQAL--DLD- 273 (687)
Q Consensus 199 ~lL~~~s~p~~~~~~~~~~~~~~~~~~~l~~~~l~~L~~Ia~~l~~~g~-~~e~~~~Y~~~R~~~l-~~sL~~L--~~~- 273 (687)
-...++.. ++.. .=.+++.+-|++-..+|...-- -+.|++.|+..|+..+ .+.+..| |..
T Consensus 206 ~~qs~e~~--~l~~-------------t~~~E~~~il~kA~~~L~~~p~lfk~~ide~~~aR~~~L~~~Fisaltrg~~~ 270 (655)
T KOG3758|consen 206 WSQSSECR--NLTG-------------TDSQEVSPILRKAFVFLSSRPVLFKYLIDEVGTARSQSLLRQFISALTRGGPG 270 (655)
T ss_pred HhhhHhhc--CCcc-------------ccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 11221111 1110 0123455666666666654322 2689999999997655 4566666 211
Q ss_pred hhh--hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---------------------ChhhhhhHH
Q 042046 274 YLE--ISIAEFNDVQSIEGYIAQWGRHLEFAVKHLFEAEYNLCNDVFERM---------------------GKDIWMGCF 330 (687)
Q Consensus 274 ~~~--~~~~~~~~~~~~e~~i~~w~~al~~av~~l~~~E~~L~~~vf~~~---------------------~~~~~~~~f 330 (687)
-.+ +.....++...+ +.|-.|+ .-..++|+.+...+|..- ...+-+.|+
T Consensus 271 ~~PrpIel~ahDPlRyI-GDmLawl-------Hq~ia~Ekelv~aLfd~~~~d~q~n~~~~en~~~vl~~~dn~lld~i~ 342 (655)
T KOG3758|consen 271 GMPRPIELHAHDPLRYI-GDMLAWL-------HQAIANEKELVEALFDFKKEDLQDNISISENLPNVLGGIDNKLLDDIL 342 (655)
T ss_pred CCCCCccccCCChHHHH-HHHHHHH-------HHHhhhHHHHHHHHhcchhhhhccCCCchhHhHHHHhchhhhHHHHHH
Confidence 001 001111222222 2344675 445789999999999210 001112444
Q ss_pred HHHHhHHHHHHHHHhHHHHhhccCChhhhh---hhhhHHHHHHhhHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 042046 331 AKIAAQAGMLAFLQFGKTVTESKKDPIKLL---KLLDIFASLNKLRTDFNRLFGGAACVEIQNLTRDLINRVINGAAEIF 407 (687)
Q Consensus 331 ~~i~~~~~i~~Ll~f~~~v~~~~~~~~klf---~lLdm~~~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~l~~~~~~~f 407 (687)
..++. |. . -=.+.|...-+++.-+| .+|..|. ..|..+..+++ .+...++.|...++..|
T Consensus 343 ~gvcr--Pl-k--vRvEqil~~e~~~Iilfki~nlL~FY~------~~fs~~v~~ds------~l~~~l~~L~d~s~q~~ 405 (655)
T KOG3758|consen 343 EGVCR--PL-K--VRVEQILQAEKNAIILFKISNLLKFYR------VTFSKLVQDDS------ALLNTLKELEDISKQRF 405 (655)
T ss_pred HHhcc--hh-H--HHHHHHHHcCcCceeehhHHHHHHHHH------HHHHHHhcccH------HHHHHHHHHHHHHHHHH
Confidence 44442 11 1 11233334445665444 4444443 22333333322 25666777777777766
Q ss_pred HHHHH-HHhhh--cCCCCCCCCccccchHHHHHHHHHhhcCCcHHHHHHHHhhhcCCCcchhhhchHHHHHHHHHHHHHH
Q 042046 408 GELLT-QVELQ--RQIPPPPDGSVPRLVSFITEYCNKLLGDDYKPVLTQVLVIHRSWKHEKFQEKLLVNEVLKIVKAIEQ 484 (687)
Q Consensus 408 ~e~~~-~i~~~--~~~~~p~dg~Vh~lT~~vm~yl~~L~~~~y~~~l~~ll~~~~~w~~~~~~~~~l~~~i~~ii~~L~~ 484 (687)
-..++ ++..- ...++|.|=..+|-.+..|+-+.-++. -|..++... ++- ..+....+++.+.-+|..-..
T Consensus 406 ~~~l~~~~~~l~~~~l~p~~DLlPpp~v~~~l~ll~ei~~-~~~a~~~~~----d~~--~~df~~l~s~vldpilq~c~~ 478 (655)
T KOG3758|consen 406 IGYLEDHVKKLMRKELSPPSDLLPPPAVREYLNLLVEIFE-IYEASHTAE----DGE--QLDFKLLLSCVLDPILQMCQK 478 (655)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCCHHHHHHHHHHHHHHH-Hhhhhhccc----ccc--ccchHHHHHHHHHHHHHHHHH
Confidence 55543 23221 122344466666655554544444441 333322211 110 111234556666666666555
Q ss_pred HHHHHHhhCCCccchhhhhhhhHHHHHHhhccCCchhhhCchHHHHHHHHHHHHH--------HhHHH-hhhhhhhhccc
Q 042046 485 NLETWLKAYDDTTLSHFFAMNNHCHLYKSLKGTKLGDLLGDSWLREHEQYKDYYS--------TIFFR-DSWGKIPSHLS 555 (687)
Q Consensus 485 nLe~ksk~y~d~aL~~iFLmNN~~yI~~~v~~S~L~~lLg~~~~~~~~~~~~~~~--------~~Y~~-~sW~~vl~~L~ 555 (687)
+-+.+-. -+|.+ +-+||+|-.+.|...+..=+... ...+..+.+.+.|. +-|+. ..-+++.+.+.
T Consensus 479 sae~~lp-~~d~~-~~if~iNcL~~iks~l~~~e~~~----~~~e~lq~~ie~~~d~L~t~q~s~ll~~~GLs~~~q~~~ 552 (655)
T KOG3758|consen 479 SAEAHLP-TSDKG-SLIFMINCLDLIKSRLARYEFLD----ERVEMLQAKIEAYLDTLVTLQVSFLLENTGLSDLYQKFN 552 (655)
T ss_pred HHHhcCC-Ccccc-cceehhhhHHHHHhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 5555422 12332 25999999999987776532111 11112222222222 22221 11333333332
Q ss_pred ccccccc--CCCChhhHHHHHHHHHHHHHHHHHHHHhcccc------cccChHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 042046 556 REGLIMF--SGGRASARDLVKKRLKAFNDALDDVYKKQSNW------VILDKDLREKTSQLITQAIAPIYRSYMQNYGAL 627 (687)
Q Consensus 556 ~~~~~~~--~~~~~~~r~~iKekfk~FN~~Fee~~~~q~~w------~VpD~~LR~~Lr~~i~~~V~PaY~~F~~ry~~~ 627 (687)
....... +-..+.+-..+++-+..|-. ..+.-..+ .+.-|.+|++++.+....++-+|..+|++-.+-
T Consensus 553 ~~~p~~~~ls~~~~l~s~~~~~~i~~fd~----~l~~~~~~~lpq~q~l~sp~~r~~i~kr~~~~~~~aY~~i~~al~~~ 628 (655)
T KOG3758|consen 553 MITPEDSVLSLDPDLESALLDEAIVKFDM----FLHAPLNLTLPQLQQLTSPMVRDEICKRSAKKFVLAYEIIYKALINP 628 (655)
T ss_pred hcCcchhhhhccccccHHHHHHHHHHHHH----HhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 2110000 00112233334433333322 12222223 345788999999999999999999999998752
Q ss_pred cccccCC-CcccccCHHHHHHHH
Q 042046 628 VEQEASS-GKYAKYTVETLEKML 649 (687)
Q Consensus 628 ~e~~k~~-~KYiKYtpe~le~~L 649 (687)
...-+-| +--++++||++...+
T Consensus 629 ~ngy~dPve~ll~~~~dq~~tll 651 (655)
T KOG3758|consen 629 YNGYKDPVESLLHFSPDQVDTLL 651 (655)
T ss_pred CCCCCChHHHHhcCCHHHhcccc
Confidence 2223456 556778888877654
No 6
>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]
Probab=98.74 E-value=0.00077 Score=74.81 Aligned_cols=400 Identities=15% Similarity=0.177 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhccccccc
Q 042046 27 KALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLL 106 (687)
Q Consensus 27 ~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~i~ 106 (687)
..|...+..-+.+-.+|. +.|.+|+.+|+.....|.-++.+.+.++..=+|-..+...+.+.++-.-+-.++-..|.
T Consensus 78 ~~lhNqi~~cd~Vl~rme---~~L~~FQ~~L~sissDI~~lqekS~~m~~~L~Nrq~v~s~Ls~fVdd~iVpp~lI~~I~ 154 (683)
T KOG1961|consen 78 ASLHNQIRACDSVLERME---TMLSSFQSDLSSISSDIKILQEKSNDMQLRLENRQAVESKLSQFVDDLIVPPELIKTIV 154 (683)
T ss_pred hhHhhhHHHHHHHHHHHH---HHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHhccccCCHHHHHHHH
Confidence 344444445555556677 89999999999999999999999888888888888888888888888888888888888
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccchhhhhhhHhHH
Q 042046 107 SDPRNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGEVEIRLDGGLL 186 (687)
Q Consensus 107 ~gp~~~l~~Yl~al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~Ll 186 (687)
.||-.+ +.|+++++.|..=+++..... + +.+..-+..|...++ .|-
T Consensus 155 ~g~vne-~~f~~~LeeL~~Kl~~v~~dq---------------~--~k~a~a~~Dv~~lLd----------------kLR 200 (683)
T KOG1961|consen 155 DGDVNE-PEFLEALEELSHKLKLVELDQ---------------S--NKDAKALKDVEPLLD----------------KLR 200 (683)
T ss_pred cCCCCc-hHHHHHHHHHHHHHHhhhhhh---------------h--ccchhhhhhHHHHHH----------------HHH
Confidence 888433 389999999988776655221 1 112111223332222 566
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcCCcCCCCCCC-HHHHHHHHHHHHHHHhCCCc--hHHHHHHHHhhhH--
Q 042046 187 DAALDKLESDFRKLLTENSVPLPMSSPSTLGQQACIAPSPLP-VSVIHKLQAILGRLIANNRF--DKCISVYVEVRSS-- 261 (687)
Q Consensus 187 ~~a~~~Le~eF~~lL~~~s~p~~~~~~~~~~~~~~~~~~~l~-~~~l~~L~~Ia~~l~~~g~~--~e~~~~Y~~~R~~-- 261 (687)
.+|+.+.-+..-.-+..-++|..- +.+| ..++=.-+-|...+..++.. .|..++|++-=+.
T Consensus 201 ~KAi~kir~~IlqkI~~fRkp~tn--------------~qi~~Q~~LLK~k~~y~FL~~n~r~~A~Elr~aYIdTM~k~y 266 (683)
T KOG1961|consen 201 LKAIEKIREFILQKIKAFRKPMTN--------------YQIPQQHALLKYKFFYEFLLENNRELALELRDAYIDTMNKIY 266 (683)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC--------------cchHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 678888777777666666777431 1233 45666667788888777653 5666777654332
Q ss_pred --HHHHHHHhc---------------chhh-hhhhh---hhhh--------------------h---------------h
Q 042046 262 --NVRASLQAL---------------DLDY-LEISI---AEFN--------------------D---------------V 285 (687)
Q Consensus 262 --~l~~sL~~L---------------~~~~-~~~~~---~~~~--------------------~---------------~ 285 (687)
+....+.+| |++. .+++. -.+. . -
T Consensus 267 ~~yF~sY~~~L~klq~~~iat~~D~~Gi~fn~skGl~~~fsk~~~~l~~r~tvF~ig~R~~Iltq~d~p~lvphiae~~k 346 (683)
T KOG1961|consen 267 LSYFKSYIRRLTKLQFEEIATKEDLMGIEFNASKGLFFFFSKLPEPLKNRSTVFTIGKRLQILTQLDAPILVPHIAEANK 346 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccCccHHHHhccCcchhhcccceeehhhhhhhhhhccccchhhhHHhcCC
Confidence 222222222 1110 00000 0000 0 0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhHHHHHHhHHHHHHHHHhHHH-HhhccCChhhhhhhhh
Q 042046 286 QSIEGYIAQWGRHLEFAVKHLFEAEYNLCNDVFERMGKDIWMGCFAKIAAQAGMLAFLQFGKT-VTESKKDPIKLLKLLD 364 (687)
Q Consensus 286 ~~~e~~i~~w~~al~~av~~l~~~E~~L~~~vf~~~~~~~~~~~f~~i~~~~~i~~Ll~f~~~-v~~~~~~~~klf~lLd 364 (687)
...|..+..|- .|+.-=..+||-.|.+-|.-.+ +-..++|.+|- ..++...+..-+. |+. ..+.+.+|-
T Consensus 347 ~~~E~lfrs~~----~al~dn~tsEYlFl~efF~~~g-d~~~~if~aIf-~~tls~~~k~~~~~Is~----~~DaIgvll 416 (683)
T KOG1961|consen 347 YYIEALFRSLH----LALLDNATSEYLFLEEFFAVSG-DQAEDIFYAIF-GKTLSVILKYLESLISD----CYDAIGVLL 416 (683)
T ss_pred CcHHHHHHHHH----HHHHhcchhHHHHHHHHHhhcC-chHHHHHHHHh-cccHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 01234455553 3335556789999999994422 23456677764 2222222222222 211 122233333
Q ss_pred HHHHHHhhH--------HHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcCCCCC--CCCccccchH
Q 042046 365 IFASLNKLR--------TDFNRLFGGAACVEIQNLTRDLINRVINGAAEIFGEL-LTQVELQRQIPPP--PDGSVPRLVS 433 (687)
Q Consensus 365 m~~~L~~l~--------p~~~~lf~~~~~~~~~~~~~~~l~~l~~~~~~~f~e~-~~~i~~~~~~~~p--~dg~Vh~lT~ 433 (687)
|.-...+++ |.+++-.. +...-+..++. ...++ .+.++.-.-+..+ +|.+.|++|+
T Consensus 417 ~Iri~~k~ql~~~rR~VP~ld~y~n--------~v~~~LWPRFq-----~V~d~h~eSlR~~di~~~~~~~d~rPHyitr 483 (683)
T KOG1961|consen 417 CIRIIHKLQLIAARRRVPALDSYWN--------SVLIFLWPRFQ-----LVMDMHCESLRKADITTLWEKLDTRPHYITR 483 (683)
T ss_pred HHHHHHHHHHHHHhcCCcchhhHHH--------HHHHHHHHHHH-----HHHHHHHHHHHhcChhhcccccCCCchHHHH
Confidence 332222222 22222110 01111111111 11111 1122222222233 7889999998
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHhhhcCCCcchhhhchHHHHHHHHHHHHHHHHHHHHhhCCCccchhhhhhhhHHHHHHh
Q 042046 434 FITEYCNKLLGDDYKPVLTQVLVIHRSWKHEKFQEKLLVNEVLKIVKAIEQNLETWLKAYDDTTLSHFFAMNNHCHLYKS 513 (687)
Q Consensus 434 ~vm~yl~~L~~~~y~~~l~~ll~~~~~w~~~~~~~~~l~~~i~~ii~~L~~nLe~ksk~y~d~aL~~iFLmNN~~yI~~~ 513 (687)
-.-.|+..+. .++. ..+. +. .+......+......-+..-++.++++--+.+||.||+.||..-
T Consensus 484 RyAEf~ss~~------~l~v---~~~~---~~----~~~~ll~~l~~~ve~fl~rmak~~~~~K~q~vFLiNNYdlil~v 547 (683)
T KOG1961|consen 484 RYAEFLSSFL------MLNV---TYGN---EQ----DVERLLERLQMEVESFLLRMAKLFPTRKQQLVFLINNYDLILGV 547 (683)
T ss_pred HHHHHHHHHH------HHHH---hccc---cc----hHHHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeccHHHHHHH
Confidence 7666555443 1111 1111 11 13333445555555556667888999888999999999999977
Q ss_pred hcc
Q 042046 514 LKG 516 (687)
Q Consensus 514 v~~ 516 (687)
+..
T Consensus 548 L~e 550 (683)
T KOG1961|consen 548 LME 550 (683)
T ss_pred HHh
Confidence 764
No 7
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8. This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.
Probab=98.57 E-value=0.0032 Score=74.91 Aligned_cols=539 Identities=16% Similarity=0.186 Sum_probs=281.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhcc
Q 042046 22 LISARKALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGL 101 (687)
Q Consensus 22 ~~A~~~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~ 101 (687)
....+..|.+.+..+-+--+.|+ ..|..++..|..+...|.-|..+.+.|+....|=..-++.++.+++..+...+.
T Consensus 28 s~~~v~~l~~~ld~a~~e~d~le---~~l~~y~~~L~~~~~di~~IE~qn~~Lqvq~~N~k~L~~eL~~Ll~~l~i~~~~ 104 (701)
T PF09763_consen 28 SEKQVNSLMEYLDEALAECDELE---SWLSLYDVELNSVRDDIEYIESQNNGLQVQSANQKLLLNELENLLDTLSIPEEH 104 (701)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 33445566666666655555566 899999999999999999999999999999999999999999999999999888
Q ss_pred ccccccCC---CCChhhHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccchhh
Q 042046 102 EKSLLSDP---RNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGEVE 178 (687)
Q Consensus 102 e~~i~~gp---~~~l~~Yl~al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ 178 (687)
...|..+| +.++..-.+++..|..|+.-+..... ...++-.....|++-.+.+.
T Consensus 105 l~~L~~~~l~~~~~l~~~e~a~~~L~~Al~~i~~~~~---------------~~~~~~~~M~Av~er~~~~~-------- 161 (701)
T PF09763_consen 105 LEALRNASLSSPDGLEKIEEAAEALYKALKAIRPDLE---------------KLDPGLGQMRAVKERREEYE-------- 161 (701)
T ss_pred HHHHhcCCCCCcccHHHHHHHHHHHHHHHHhcccccc---------------cCCCcHHHHHHHHHHHHHHH--------
Confidence 88888887 45699999999999999988764210 00111111112211111111
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcCCcCCCCCCCHHHHHHH---HHHHHHHHhCCC--chHHHH
Q 042046 179 IRLDGGLLDAALDKLESDFRKLLTENSVPLPMSSPSTLGQQACIAPSPLPVSVIHKL---QAILGRLIANNR--FDKCIS 253 (687)
Q Consensus 179 ~~~~~~Ll~~a~~~Le~eF~~lL~~~s~p~~~~~~~~~~~~~~~~~~~l~~~~l~~L---~~Ia~~l~~~g~--~~e~~~ 253 (687)
.....-..+....|...|..+........+..+ .... ..+ +-.......| ..+..|+-.... -..+++
T Consensus 162 -~~~~~F~~r~~~~l~~~F~~~~~~~~~~~~~~~----~~~~-~~~-~~h~~~~~~L~~ys~Li~~lK~~d~~~y~~L~~ 234 (701)
T PF09763_consen 162 -KVSDKFCKRLSRFLNNMFKNLVDELLSDKDSFS----QSGK-LSL-PKHSSLHNELLPYSGLILWLKEVDPESYQALIK 234 (701)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----cccc-CCh-HHHHHHHHHHHhHHHHHHHHHHcCHHHHHHHHH
Confidence 112245566677788888666554322211000 0000 000 0011223333 344555533321 134566
Q ss_pred HHHHhhhHHHHHHHHhcchhhhhhhhh------------hh------hhhhh--------h-hH----------------
Q 042046 254 VYVEVRSSNVRASLQALDLDYLEISIA------------EF------NDVQS--------I-EG---------------- 290 (687)
Q Consensus 254 ~Y~~~R~~~l~~sL~~L~~~~~~~~~~------------~~------~~~~~--------~-e~---------------- 290 (687)
.|...=+....+-+..+=.. ...... +. ..|.. . .+
T Consensus 235 ~Y~~~~~~ly~~e~~~~~~~-~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~~~~s~~~~~~~~~~~~~~~~ 313 (701)
T PF09763_consen 235 AYNSSMSKLYEREIRDFFEA-LKKSISKASGDENDESLFTSSSPELSTEWISLRKSRKLTLDRSKTLRNIDMWAPSPKSS 313 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHhhccCcchhhhhcccccccchhcccccccccccccCCCCccchhcccccCCCCcc
Confidence 66655554444433332100 000000 00 00000 0 00
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHhhccCChhhhhhHHHHHHh----------------------------HHHH
Q 042046 291 YIAQWGRHLEFA---VKHLFEAEYNLCNDVFERMGKDIWMGCFAKIAA----------------------------QAGM 339 (687)
Q Consensus 291 ~i~~w~~al~~a---v~~l~~~E~~L~~~vf~~~~~~~~~~~f~~i~~----------------------------~~~i 339 (687)
+-...-.++..+ +.-+...|...|.+.|.-.+. ...-|++.+. ...+
T Consensus 314 ~~~~~~~a~~~~L~el~pl~~~EQ~Fi~~FFhl~s~--~~~~f~~~v~~~~~~~r~~~~~~~~~~~~~d~~~~~~~~~~m 391 (701)
T PF09763_consen 314 GKLRFDEAFEQALEELEPLCIREQNFIIDFFHLSSN--STLDFADYVKQSSPSERRSSDLSSSKPMEPDRESAKDVRQMM 391 (701)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--ccCChhhHHhcCCcccccccccccccccCcchhHHHHHHHHH
Confidence 000222333322 355667899999998854221 0000111100 0011
Q ss_pred HHHHH--------hHHHHhhccCChhhhhhhhhHHHHHHhhHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042046 340 LAFLQ--------FGKTVTESKKDPIKLLKLLDIFASLNKLRTDFNRLFGGAACVEIQNLTRDLINRVINGAAEIFGELL 411 (687)
Q Consensus 340 ~~Ll~--------f~~~v~~~~~~~~klf~lLdm~~~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~l~~~~~~~f~e~~ 411 (687)
..++. |.+.+ .+.+|.....+|-+ |....-. ..+. ...-+..++.++.......|..|+
T Consensus 392 ~~iF~~l~~~l~~~v~~~--~~~dp~~~~~~l~~---le~~~~~----~~~s----~~~fl~~~L~~l~~~~k~~f~~fv 458 (701)
T PF09763_consen 392 SEIFGFLENELQSFVDWA--EKNDPLQCVSMLVY---LERYIKS----LEQS----NQSFLSNLLQKLQVRLKRLFDKFV 458 (701)
T ss_pred HHHHHHHHHHHHHHHHHH--HccCchhHHHHHHH---HHHHHHH----hcCc----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 11111 22233322222222 1111111 1111 122356677788888888888886
Q ss_pred H-HHhhhcCCCC--CCCCccccchHHHHHHHHHhhcCCcHHHHHHHHhhhcCCCcchhhhchHHHHHHHHHHHHHHHHHH
Q 042046 412 T-QVELQRQIPP--PPDGSVPRLVSFITEYCNKLLGDDYKPVLTQVLVIHRSWKHEKFQEKLLVNEVLKIVKAIEQNLET 488 (687)
Q Consensus 412 ~-~i~~~~~~~~--p~dg~Vh~lT~~vm~yl~~L~~~~y~~~l~~ll~~~~~w~~~~~~~~~l~~~i~~ii~~L~~nLe~ 488 (687)
. +|..-....+ -.-.||-|.....-.|+ ..++.++.....+ ......+......++.++...|+.
T Consensus 459 ~~Qi~~ie~~k~~~k~r~GVl~~i~~fp~f~---------~~~E~~~~~~~~~---~~~r~~vd~aY~kl~~a~~~~l~~ 526 (701)
T PF09763_consen 459 DEQIKSIEETKVSKKKRKGVLPFIKKFPEFV---------KRVESMFSGAERA---REDRSLVDKAYEKLVRAMFDSLER 526 (701)
T ss_pred HHHHHHHHHhccccCCCCccchHHHHHHHHH---------HHHHHHHcccccc---chHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3433222111 12236666444444444 4455555542221 112345777888999999999999
Q ss_pred HHhhCC-----------CccchhhhhhhhHHHHHHhhccCCchhhhCchHHHHHHHHHH----HHHHhHHHhhhhhhhhc
Q 042046 489 WLKAYD-----------DTTLSHFFAMNNHCHLYKSLKGTKLGDLLGDSWLREHEQYKD----YYSTIFFRDSWGKIPSH 553 (687)
Q Consensus 489 ksk~y~-----------d~aL~~iFLmNN~~yI~~~v~~S~L~~lLg~~~~~~~~~~~~----~~~~~Y~~~sW~~vl~~ 553 (687)
.++.-+ ...-.+|.+|=|+||+...+..-.....| +.|.++-....+ .|...+++..++++..+
T Consensus 527 ~a~~~~~~~~~~~~~dk~~~~~~v~~leN~~~~~e~l~~~~~~~~l-~~~~~~A~~~~~~~~~~Y~~~~l~r~~~kL~~F 605 (701)
T PF09763_consen 527 IAKLSPKNSGSQDPEDKEKLNYHVVLLENYHHFYEELSQLKINSVL-EEFRKEAKQIYDEHLEAYVTFLLRRPFGKLLDF 605 (701)
T ss_pred hcccCcccccccCccccccchhhHHHHHHHHHHHHHHhhccchhhH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 997543 23458999999999999888765552333 235554444444 45555555566666665
Q ss_pred cccc-----ccccc--CCCChhhHHHHHHHHH-----HHHHHHHHHHHh-cccc--c----ccChHHHHHHHHHHHHHHH
Q 042046 554 LSRE-----GLIMF--SGGRASARDLVKKRLK-----AFNDALDDVYKK-QSNW--V----ILDKDLREKTSQLITQAIA 614 (687)
Q Consensus 554 L~~~-----~~~~~--~~~~~~~r~~iKekfk-----~FN~~Fee~~~~-q~~w--~----VpD~~LR~~Lr~~i~~~V~ 614 (687)
.... ..++. +.-.+-+|+.+|.-++ ..-...+.+|++ ++++ . ..+..|-+.+=+++.+..+
T Consensus 606 ~~gve~l~~~~~~~ei~~~~~ySk~~l~kvl~~y~~kev~k~i~~l~krveKHf~~~~~~~~~~~~Ll~~vW~~~q~~~i 685 (701)
T PF09763_consen 606 FEGVEALLQTVSPEEISYQAAYSKQELKKVLKSYPSKEVRKGIEALYKRVEKHFSRDADDPSFEEDLLQVVWSAMQEEFI 685 (701)
T ss_pred HHHHHHHHhccCchhcccchhccHHHHHHHHHhCChHHHHHHHHHHHHHHHHHcCCccccccchhhHHHHHHHHHHHHHH
Confidence 5321 11110 0011233555554444 466788888854 4444 1 2355666666666666665
Q ss_pred HHHHHHHH
Q 042046 615 PIYRSYMQ 622 (687)
Q Consensus 615 PaY~~F~~ 622 (687)
-.|.+|++
T Consensus 686 ~~~~~l~~ 693 (701)
T PF09763_consen 686 RQYERLET 693 (701)
T ss_pred HHHHHHHH
Confidence 55555544
No 8
>KOG2604 consensus Subunit of cis-Golgi transport vesicle tethering complex - Sec34p [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.07 E-value=0.91 Score=52.16 Aligned_cols=142 Identities=18% Similarity=0.339 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhh
Q 042046 19 IENLISARKALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAV 98 (687)
Q Consensus 19 ~~~~~A~~~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~ 98 (687)
+|.+.-..+.-...|...++.-+.+..+-.-...++++++.+..+---++.+..+|..+.++|.+.| .||+..
T Consensus 97 ~d~l~~~~~~c~~il~q~~~~~~~l~sl~~k~~~vs~kt~~l~eace~l~~eq~kl~elae~I~k~L-------~yF~~l 169 (733)
T KOG2604|consen 97 LDQLKKRIEECDAILDQTNNALDTLLSLQKKFEFVSQKTSALHEACEQLLEEQSKLSELAEGIRKKL-------HYFAEL 169 (733)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hhHHHH
Confidence 4445555555556666666666666644455556667778888777778888888888888888884 455555
Q ss_pred hccccccccCC--CCChhhHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccch
Q 042046 99 HGLEKSLLSDP--RNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGE 176 (687)
Q Consensus 99 ~~~e~~i~~gp--~~~l~~Yl~al~~L~~al~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~ 176 (687)
..+-..+ +.| ..+=.+|...+.+|++++.|+..|..+ +|. ++|+-+ .+
T Consensus 170 e~l~~~l-~~pt~~v~~~sF~~~l~~ld~ci~~l~en~~f-----kd~-----------~~Y~~k-------~k------ 219 (733)
T KOG2604|consen 170 EELNRRL-NHPTLSVGKVSFKEMLAKLDECIMFLEENPDF-----KDA-----------PAYLGK-------YK------ 219 (733)
T ss_pred HHHHHhh-cCcchhhhhhhHHHHHHHHHHHHHHHHhCCch-----hhh-----------HHHHHH-------HH------
Confidence 5444443 345 568899999999999999999988642 111 122211 22
Q ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHhhc
Q 042046 177 VEIRLDGGLLDAALDKLESDFRKLLTEN 204 (687)
Q Consensus 177 ~~~~~~~~Ll~~a~~~Le~eF~~lL~~~ 204 (687)
..|.+|+.-.-.+|..+|.+-
T Consensus 220 -------qcL~kA~~lik~y~~~vlkq~ 240 (733)
T KOG2604|consen 220 -------QCLSKALGLIKTYFTNVLKQT 240 (733)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999999874
No 9
>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1. This complex is thought to be important for tethering vesicles to the Golgi [].; GO: 0006886 intracellular protein transport, 0005801 cis-Golgi network, 0016020 membrane
Probab=96.83 E-value=0.022 Score=54.68 Aligned_cols=122 Identities=20% Similarity=0.340 Sum_probs=87.7
Q ss_pred CchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhccccccccCC-CCChhhHHHHHHHHHHH
Q 042046 48 PRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDP-RNDLPGYLSVLKRLEEA 126 (687)
Q Consensus 48 ~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~i~~gp-~~~l~~Yl~al~~L~~a 126 (687)
..|+.+.......+..-..++...+.|-.-+.+++...+.+.+-+.||+..+.+...+...+ ...-+.|+..|.+|+++
T Consensus 28 ~~l~~l~~~~~~Vs~kT~~l~~~ce~Ll~eq~~L~~~ae~I~~~L~yF~~Ld~itr~Ln~p~~sV~~~~F~~~L~~LD~c 107 (157)
T PF04136_consen 28 DQLDELQEQYNSVSEKTNSLHEACEQLLEEQTRLEELAEEISEKLQYFEELDPITRRLNSPGSSVNSDSFKPMLSRLDEC 107 (157)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhHHHHHHHHcCCCCcccchHHHHHHHHHHHH
Confidence 33444444444444444555666888888899999999999999999999988877765432 56688999999999999
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhcccccHHHHHHHHHhhhhhhhcccchhhhhhhHhHHHHHHHHHHHHHHHHHhhcC
Q 042046 127 LRFLGDNCGLAIQWLEDIVEYLEDNRMADEKYLLNLKKSLKGLRELENGEVEIRLDGGLLDAALDKLESDFRKLLTENS 205 (687)
Q Consensus 127 l~~l~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~Ll~~a~~~Le~eF~~lL~~~s 205 (687)
+.||..|..+. + .+.|.. ++ ..++.+|+.-+..+|...|..-+
T Consensus 108 l~Fl~~h~~fk-----------e-----a~~Y~~-------------------rf-~q~ltRAl~lIk~y~~~~l~~~~ 150 (157)
T PF04136_consen 108 LEFLEEHPNFK-----------E-----AEVYLI-------------------RF-RQCLTRALTLIKNYVVNTLRSAT 150 (157)
T ss_pred HHHHHHhhhhh-----------h-----hHHHHH-------------------HH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999774321 1 112222 22 27888999999999999888753
No 10
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=96.61 E-value=2.6 Score=50.75 Aligned_cols=131 Identities=15% Similarity=0.247 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHhhhHHHHHHHHhcchhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 042046 233 HKLQAILGRLIANNRFDKCISVYVEVRSSNVRASLQALDLDYLEISIAEFNDVQSIEGYIAQWGRHLEFAVKHLFEAEYN 312 (687)
Q Consensus 233 ~~L~~Ia~~l~~~g~~~e~~~~Y~~~R~~~l~~sL~~L~~~~~~~~~~~~~~~~~~e~~i~~w~~al~~av~~l~~~E~~ 312 (687)
...+.+.+-|..-|+..++.+-|..+|...+.+.=...... .....+..|...+--.+..++..|.+
T Consensus 201 ~~~~~~~~if~~i~R~~~l~~~Y~~~r~~~l~~~W~~~~~~-------------~~~~~~~~~L~~fyd~ll~~l~~E~~ 267 (766)
T PF10191_consen 201 DAAKEYVKIFSSIGREPQLEQYYCKCRKAPLQRLWQEYCQS-------------DQSQSFAEWLPSFYDELLSLLHQELK 267 (766)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhhh-------------ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555668889999999999997665432221100 00134667777777777899999999
Q ss_pred HHHHhhccCChhhhhhHHHHHHhHHHHHHHH-HhHHHHhh-ccC-Chh-hhhhhhhHHHHHHhhHHHHHhhhCC
Q 042046 313 LCNDVFERMGKDIWMGCFAKIAAQAGMLAFL-QFGKTVTE-SKK-DPI-KLLKLLDIFASLNKLRTDFNRLFGG 382 (687)
Q Consensus 313 L~~~vf~~~~~~~~~~~f~~i~~~~~i~~Ll-~f~~~v~~-~~~-~~~-klf~lLdm~~~L~~l~p~~~~lf~~ 382 (687)
-|.+||+.... +....+.++. ..|- .|...|.. .++ .|. ++..++++|.+-.++.-.++.+|..
T Consensus 268 w~~~vF~~~~~-~~~~ll~~~L-----~~L~PS~~~~l~~al~~~~~~~~L~~L~~l~~~t~~Fa~~l~~~l~~ 335 (766)
T PF10191_consen 268 WCSQVFPDESP-VLPKLLAETL-----SALQPSFPSRLSSALKRAGPETKLETLIELYQATEHFARNLEHLLSS 335 (766)
T ss_pred HHHHHcCCchh-HHHHHHHHHH-----HhcCccHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998332 2222333221 1111 34444431 222 333 5889999999988888777777765
No 11
>KOG2148 consensus Exocyst protein Sec3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.50 E-value=6.3 Score=45.25 Aligned_cols=211 Identities=17% Similarity=0.228 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhcCCCCCCCCccccchHHHHHHHHHhhcCCcHHHHHHHHhhhcCCCcchhhhc
Q 042046 394 DLINRVINGAAEIFGELLT----QVELQRQIPPPPDGSVPRLVSFITEYCNKLLGDDYKPVLTQVLVIHRSWKHEKFQEK 469 (687)
Q Consensus 394 ~~l~~l~~~~~~~f~e~~~----~i~~~~~~~~p~dg~Vh~lT~~vm~yl~~L~~~~y~~~l~~ll~~~~~w~~~~~~~~ 469 (687)
-.+..+.-..+.-|..|+. +|+.-. ...-+-|||-| |+-++. .+-...+.++.... ...
T Consensus 607 ~tlgsllv~VkrqFdrfiq~qc~qieevk-i~kksk~gILP-------yv~rFe--nfa~raE~if~nae-------rRt 669 (867)
T KOG2148|consen 607 LTLGSLLVRVKRQFDRFIQNQCSQIEEVK-IAKKSKIGILP-------YVFRFE--NFARRAEIIFENAE-------RRT 669 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccccccc-------cHHHHH--HHHHHHHHHHhhhh-------hcc
Confidence 3344444455566666652 222111 11224467777 333333 34455677776411 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCccchhhhhhhhHHHHHHhhccCCchhhhCchHHHHHHHHHHHHHHhHHHhhhhh
Q 042046 470 LLVNEVLKIVKAIEQNLETWLKAYDDTTLSHFFAMNNHCHLYKSLKGTKLGDLLGDSWLREHEQYKDYYSTIFFRDSWGK 549 (687)
Q Consensus 470 ~l~~~i~~ii~~L~~nLe~ksk~y~d~aL~~iFLmNN~~yI~~~v~~S~L~~lLg~~~~~~~~~~~~~~~~~Y~~~sW~~ 549 (687)
.+......++.+...+++.-|..|.... ..+-+|-|+|++...+-. |.-..-+.-...+.+....+.+.|...+.|.
T Consensus 670 dlekaYtklvravfvgiek~Aqq~pKtp-~dVv~mENyh~~y~tLs~--Lkis~lda~kkeaka~~~dhl~ayV~~~~Gr 746 (867)
T KOG2148|consen 670 DLEKAYTKLVRAVFVGIEKIAQQDPKTP-ADVVLMENYHHFYATLSD--LKISCLDAAKKEAKALYADHLAAYVKESMGR 746 (867)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHhhHHHHHHHHHH--HhccchhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4566677888999999999998887733 788899999999866532 2222222233344556666778888888888
Q ss_pred hhhcccc--ccc--cccCCC------------ChhhHHHHHHHHHH-HHHHHHHHHHhcccccccChHHHHHHHHHHHHH
Q 042046 550 IPSHLSR--EGL--IMFSGG------------RASARDLVKKRLKA-FNDALDDVYKKQSNWVILDKDLREKTSQLITQA 612 (687)
Q Consensus 550 vl~~L~~--~~~--~~~~~~------------~~~~r~~iKekfk~-FN~~Fee~~~~q~~w~VpD~~LR~~Lr~~i~~~ 612 (687)
.+..|.. +|. ....|- +-.-|..|++--.+ --.++|.+|++-..--+...+|-+.+=...++-
T Consensus 747 PLekln~Ffe~v~~~vaqGirpeeiSYQ~aFsk~elrkvi~qypgkEVkKglenlYKKveKnL~aeenLLqvvW~~mqee 826 (867)
T KOG2148|consen 747 PLEKLNTFFEGVNNKVAQGIRPEEISYQLAFSKQELRKVIKQYPGKEVKKGLENLYKKVEKNLLAEENLLQVVWHKMQEE 826 (867)
T ss_pred hHHHHHHHHHhhHHHHhcCCChhhhhHHHHhhHHHHHHHHHHcchhhHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 8776642 111 001110 01112223322222 567788899665444455777777777777777
Q ss_pred HHHHHHHHHHHh
Q 042046 613 IAPIYRSYMQNY 624 (687)
Q Consensus 613 V~PaY~~F~~ry 624 (687)
.+--|..|-+.-
T Consensus 827 Fi~qy~~f~~lI 838 (867)
T KOG2148|consen 827 FIDQYESFEQLI 838 (867)
T ss_pred HHHHHHHHHHHH
Confidence 777777666553
No 12
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [].
Probab=74.67 E-value=1.3e+02 Score=32.53 Aligned_cols=22 Identities=18% Similarity=0.327 Sum_probs=16.9
Q ss_pred HHHHHHHHhhhHHHHHHHHhcc
Q 042046 250 KCISVYVEVRSSNVRASLQALD 271 (687)
Q Consensus 250 e~~~~Y~~~R~~~l~~sL~~L~ 271 (687)
+....|-..|..++...|..+.
T Consensus 193 ~Lr~~fl~~r~~~l~~~l~~i~ 214 (338)
T PF04124_consen 193 ELRLKFLQSRDSWLQSVLEEID 214 (338)
T ss_pred HHHHHHHHHHHHHHhhhHHHHh
Confidence 4667788889999998776664
No 13
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known.
Probab=69.00 E-value=81 Score=33.35 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=25.6
Q ss_pred HHHHHhhhHHHhhhhHHHHHHHhhhhhcccccccc
Q 042046 73 ALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLS 107 (687)
Q Consensus 73 ~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~i~~ 107 (687)
.+.+.++|+...+..+..|...++....++..+..
T Consensus 106 ~~~rkr~~l~~ll~~L~~i~~v~~~~~~l~~ll~~ 140 (291)
T PF10475_consen 106 RLQRKRQNLKKLLEKLEQIKTVQQTQSRLQELLEE 140 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56677777778888888887777777777766543
No 14
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=64.43 E-value=2.3e+02 Score=31.32 Aligned_cols=75 Identities=15% Similarity=0.236 Sum_probs=56.5
Q ss_pred CchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhccccccccCCCCChhhHHHHHHH
Q 042046 48 PRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKR 122 (687)
Q Consensus 48 ~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~i~~gp~~~l~~Yl~al~~ 122 (687)
..+..|..+-..-|..|.-|-.+...|....+|+-.++..+..+...-++..+++..+...--.+...-|.+|..
T Consensus 71 ~~i~~ik~kA~~sE~~V~~it~dIk~LD~AKrNLT~SIT~LkrL~MLv~a~~qL~~~~~~r~Y~e~a~~L~av~~ 145 (383)
T PF04100_consen 71 EKISEIKSKAEESEQMVQEITRDIKQLDNAKRNLTQSITTLKRLQMLVTAVEQLKELAKKRQYKEIASLLQAVKE 145 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455566667777788888888899999999999999999999999999999998887664332333333333333
No 15
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]
Probab=61.68 E-value=1.2e+02 Score=37.60 Aligned_cols=14 Identities=36% Similarity=0.489 Sum_probs=9.5
Q ss_pred ChhhHHHHHHHHHH
Q 042046 112 DLPGYLSVLKRLEE 125 (687)
Q Consensus 112 ~l~~Yl~al~~L~~ 125 (687)
.|..|.+.+++|-+
T Consensus 1665 ~lq~~~~~~~~l~~ 1678 (1758)
T KOG0994|consen 1665 ILQKYYELVDRLLE 1678 (1758)
T ss_pred HHHHHHHHHHHHHH
Confidence 56777777777654
No 16
>PRK10807 paraquat-inducible protein B; Provisional
Probab=56.85 E-value=69 Score=37.19 Aligned_cols=75 Identities=7% Similarity=0.158 Sum_probs=36.3
Q ss_pred chhHHHHHHHHHHHHHHHHH--HHHHHHHH----hhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHH
Q 042046 17 HGIENLISARKALKVSLEKS--KSLALALE----RAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAA 90 (687)
Q Consensus 17 ~~~~~~~A~~~~L~~~L~ks--~~l~~~~~----~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~ 90 (687)
+.++++.+.+..+-+.+++- .++..++. .+...+.+++.-+..+++.+.| ...+.+-.++.+|+..++.
T Consensus 413 s~l~~l~~~~~~il~kin~lple~i~~~l~~tL~~~~~tl~~l~~~l~~l~~ll~~-----~~~~~Lp~~L~~TL~~l~~ 487 (547)
T PRK10807 413 GGLAQIQQKLMEALDKINNLPLNPMIEQATSTLSESQRTMRELQTTLDSLNKITSS-----QSMQQLPADMQKTLRELNR 487 (547)
T ss_pred CCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-----HHHHHHHHHHHHHHHHHHH
Confidence 44566665555444444332 11122222 2223333333333333333333 4445555777778777777
Q ss_pred HHHHhh
Q 042046 91 VLKVFD 96 (687)
Q Consensus 91 vl~~~~ 96 (687)
++.-+.
T Consensus 488 ~l~~~~ 493 (547)
T PRK10807 488 SMQGFQ 493 (547)
T ss_pred HHhhcC
Confidence 776665
No 17
>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins [].; GO: 0006887 exocytosis, 0048278 vesicle docking, 0005737 cytoplasm
Probab=50.41 E-value=5.2e+02 Score=31.03 Aligned_cols=79 Identities=14% Similarity=0.268 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHhhhHHHHHHHHhcch-hhhhhhhhhhhhhhhh----------hHHHHHHHHHHH
Q 042046 232 IHKLQAILGRLIANNRFDKCISVYVEVRSSNVRASLQALDL-DYLEISIAEFNDVQSI----------EGYIAQWGRHLE 300 (687)
Q Consensus 232 l~~L~~Ia~~l~~~g~~~e~~~~Y~~~R~~~l~~sL~~L~~-~~~~~~~~~~~~~~~~----------e~~i~~w~~al~ 300 (687)
...++.+|+-|..-+....|++.|++.+.-+... ..++. +.+. ....|..+ ...+......+
T Consensus 128 ~~~M~~~A~vL~~fngg~~~i~~fi~k~~~f~~~--~~~~~~~~~~----~~~~~~~l~d~~~~~~~~~~~l~~~~~~i- 200 (710)
T PF07393_consen 128 YERMKEFAKVLLEFNGGSSCIDFFINKHEFFIDE--DQLDESNGFE----DEEIWEKLSDPDSHPPINEESLDAFFEDI- 200 (710)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHhChhhhhh--hhhccccccc----hhHHHHhccCcccccccchHHHHHHHHHH-
Confidence 4678888888887766678999999988655521 11110 0000 00111111 12233333333
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 042046 301 FAVKHLFEAEYNLCNDVFER 320 (687)
Q Consensus 301 ~av~~l~~~E~~L~~~vf~~ 320 (687)
...+..|.++++.||+.
T Consensus 201 ---~~~i~~e~~iI~~VFp~ 217 (710)
T PF07393_consen 201 ---RDVINEESKIIDRVFPN 217 (710)
T ss_pred ---HHHHHHHHHHHHHHCCC
Confidence 77889999999999987
No 18
>PF05377 FlaC_arch: Flagella accessory protein C (FlaC); InterPro: IPR008039 Although archaeal flagella appear superficially similar to those of bacteria, they are quite distinct []. In several archaea, the flagellin genes are followed immediately by the flagellar accessory genes flaCDEFGHIJ. The gene products may have a role in translocation, secretion, or assembly of the flagellum. FlaC is a protein whose exact role is unknown but it has been shown to be membrane-associated (by immuno-blotting fractionated cells) [].
Probab=43.70 E-value=29 Score=27.11 Aligned_cols=48 Identities=15% Similarity=0.490 Sum_probs=29.7
Q ss_pred hHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhc
Q 042046 50 LDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHG 100 (687)
Q Consensus 50 L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~ 100 (687)
++.+++++++++.+|.-+.++.+.+...-+-|+. .+..+++.|+.++.
T Consensus 2 i~elEn~~~~~~~~i~tvk~en~~i~~~ve~i~e---nvk~ll~lYE~Vs~ 49 (55)
T PF05377_consen 2 IDELENELPRIESSINTVKKENEEISESVEKIEE---NVKDLLSLYEVVSN 49 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHc
Confidence 5677778888887755555555544433333333 34778888887664
No 19
>PF07426 Dynactin_p22: Dynactin subunit p22; InterPro: IPR009991 This family contains p22, the smallest subunit of dynactin, a complex that binds to cytoplasmic dynein and is a required activator for cytoplasmic dynein-mediated vesicular transport. Dynactin localises to the cleavage furrow and to the midbodies of dividing cells, suggesting that it may function in cytokinesis [].
Probab=38.86 E-value=2.8e+02 Score=27.05 Aligned_cols=17 Identities=18% Similarity=0.393 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHhhc
Q 042046 188 AALDKLESDFRKLLTEN 204 (687)
Q Consensus 188 ~a~~~Le~eF~~lL~~~ 204 (687)
.-+..|.+++..+|..+
T Consensus 140 e~~~~ls~~~~~Ll~~Y 156 (174)
T PF07426_consen 140 EESEELSEEVQELLQQY 156 (174)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566666676666665
No 20
>COG2733 Predicted membrane protein [Function unknown]
Probab=38.48 E-value=2.8e+02 Score=30.62 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=58.6
Q ss_pred HHhHHHhhhhhhhhccccccccccCCCChhhHHHH-HHHHHHHHHHHHHHHHhcccccccChHHHHHHHHHHHH---HHH
Q 042046 539 STIFFRDSWGKIPSHLSREGLIMFSGGRASARDLV-KKRLKAFNDALDDVYKKQSNWVILDKDLREKTSQLITQ---AIA 614 (687)
Q Consensus 539 ~~~Y~~~sW~~vl~~L~~~~~~~~~~~~~~~r~~i-Kekfk~FN~~Fee~~~~q~~w~VpD~~LR~~Lr~~i~~---~V~ 614 (687)
...|..+.|+....++..+-... -..+ |--++.|+.-++++ +.|++||.+|..-+.+ .++
T Consensus 291 i~~~~~~~w~~~~~~l~~D~e~~--------~s~l~~~l~~~~~~~Ge~l--------~~D~~lr~kln~~~~~aa~~l~ 354 (415)
T COG2733 291 IATAAGDMWTSLSEWLKEDYESE--------DSMLRKRLARAVQSVGEEL--------IADDALRAKLNEHLVQAAERLA 354 (415)
T ss_pred HHHHHHHHHHHHHHHHHhcccCc--------hhHHHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHHHHHH
Confidence 45678899999988887652211 1122 34466777777776 4699999998876544 355
Q ss_pred HHHHHHHHHhccccccccCCCcccccCHHHHHHHHhhh
Q 042046 615 PIYRSYMQNYGALVEQEASSGKYAKYTVETLEKMLGSL 652 (687)
Q Consensus 615 PaY~~F~~ry~~~~e~~k~~~KYiKYtpe~le~~L~~L 652 (687)
+-|..+..++- .+. -=+|+.+++.++|..-
T Consensus 355 e~~~~~it~~I--~dT------v~~wD~~elsr~iel~ 384 (415)
T COG2733 355 EEKHAEITKHI--SDT------VKRWDAEELSRQIELN 384 (415)
T ss_pred HHHhHHHHHHH--HHH------HhhcCHHHHHHHHHHh
Confidence 55555555552 222 1268999999988653
No 21
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=38.42 E-value=4.1e+02 Score=26.56 Aligned_cols=26 Identities=12% Similarity=0.066 Sum_probs=13.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHH
Q 042046 16 NHGIENLISARKALKVSLEKSKSLAL 41 (687)
Q Consensus 16 ~~~~~~~~A~~~~L~~~L~ks~~l~~ 41 (687)
.++=|.+.-.++-=+++++.+++.++
T Consensus 20 ~hKRdilvdrVe~Ardsq~eaqeQF~ 45 (201)
T PF11172_consen 20 VHKRDILVDRVEDARDSQQEAQEQFK 45 (201)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555554443
No 22
>PLN02939 transferase, transferring glycosyl groups
Probab=34.99 E-value=1e+03 Score=29.86 Aligned_cols=57 Identities=16% Similarity=0.094 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHh
Q 042046 22 LISARKALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVG 78 (687)
Q Consensus 22 ~~A~~~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~ 78 (687)
+..|++.|++.|....+....+-+..+--..++..+..||..+.-.+.++.+|..++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (977)
T PLN02939 238 LKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQ 294 (977)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccchh
Confidence 567888888888888777777665555555566666666666555555555554443
No 23
>KOG3821 consensus Heparin sulfate cell surface proteoglycan [Signal transduction mechanisms]
Probab=34.33 E-value=35 Score=38.83 Aligned_cols=73 Identities=15% Similarity=0.220 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccccChHHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccccCCCcccccCHHHHH
Q 042046 568 SARDLVKKRLKAFNDALDDVYKKQSNWVILDKDLREKTSQLITQAIAPIYRSYMQNYGALV-EQEASSGKYAKYTVETLE 646 (687)
Q Consensus 568 ~~r~~iKekfk~FN~~Fee~~~~q~~w~VpD~~LR~~Lr~~i~~~V~PaY~~F~~ry~~~~-e~~k~~~KYiKYtpe~le 646 (687)
.=|-.+-.+.+.|++.|+|+.+.-.. ....+..-.|+++|-...... ++.+--.-|.-++-..+|
T Consensus 95 ~Lr~~l~s~~r~F~E~f~ell~~ae~--------------~l~~mF~~tYg~ly~qn~~~~~dlFtel~~y~~~~~~nle 160 (563)
T KOG3821|consen 95 VLRFVLASNARKFDEFFLELLRNAEN--------------SLNAMFSKTYGSLYPQNAELFNDLFTELKLYYVGSNVNLE 160 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhccccCCHH
Confidence 44667778999999999999876443 344567777888887664322 333334568889999999
Q ss_pred HHHhhhcC
Q 042046 647 KMLGSLFQ 654 (687)
Q Consensus 647 ~~L~~LF~ 654 (687)
++|++||.
T Consensus 161 e~l~eff~ 168 (563)
T KOG3821|consen 161 ETLNEFFA 168 (563)
T ss_pred HHHHHHHH
Confidence 99999885
No 24
>KOG2196 consensus Nuclear porin [Nuclear structure]
Probab=34.19 E-value=3.3e+02 Score=27.99 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=50.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhH--HHHHHhhhHHHhhhhHH----
Q 042046 16 NHGIENLISARKALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKD--ALVAVGGHINRAVGPAA---- 89 (687)
Q Consensus 16 ~~~~~~~~A~~~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~--~L~~~~~nI~~tl~~~~---- 89 (687)
+..++.++-+...|.++|+=-...-+.+. ..|..++..+...+-.+.--+.+.+ +--....|||.-|+.++
T Consensus 119 y~e~~~vk~~qkrLdq~L~~I~sqQ~ELE---~~L~~lE~k~~~~~g~~~~~~~D~eR~qty~~a~nidsqLk~l~~dL~ 195 (254)
T KOG2196|consen 119 YNEVVKVKLDQKRLDQELEFILSQQQELE---DLLDPLETKLELQSGHTYLSRADVEREQTYKMAENIDSQLKRLSEDLK 195 (254)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 44566777778888888877766667777 7888888877765543221112222 23345568888887744
Q ss_pred HHHHHhhhhh
Q 042046 90 AVLKVFDAVH 99 (687)
Q Consensus 90 ~vl~~~~~~~ 99 (687)
+|+...+..+
T Consensus 196 ~ii~~lN~~~ 205 (254)
T KOG2196|consen 196 QIIKSLNTMS 205 (254)
T ss_pred HHHHHHHhcc
Confidence 4555555444
No 25
>PHA01746 hypothetical protein
Probab=34.15 E-value=16 Score=32.35 Aligned_cols=22 Identities=18% Similarity=0.613 Sum_probs=13.3
Q ss_pred HHHHHHHhccccccccCCCcccccCHHH
Q 042046 617 YRSYMQNYGALVEQEASSGKYAKYTVET 644 (687)
Q Consensus 617 Y~~F~~ry~~~~e~~k~~~KYiKYtpe~ 644 (687)
-..|+++|...+ .||||+||.+
T Consensus 76 Ia~FLeKYS~~L------nkYVkFs~~n 97 (131)
T PHA01746 76 IAEFLEKYSDFL------NEYVKFTPRN 97 (131)
T ss_pred HHHHHHHHHHHH------HHHeeeccCC
Confidence 356777775422 4677777743
No 26
>PF15264 TSSC4: Tumour suppressing sub-chromosomal transferable candidate 4
Probab=30.75 E-value=16 Score=33.13 Aligned_cols=20 Identities=15% Similarity=0.433 Sum_probs=16.9
Q ss_pred ccccccCCCcccccCHHHHH
Q 042046 627 LVEQEASSGKYAKYTVETLE 646 (687)
Q Consensus 627 ~~e~~k~~~KYiKYtpe~le 646 (687)
+.++-+||+||.|||-+++.
T Consensus 54 vPDYv~nP~KwTkYSL~dv~ 73 (115)
T PF15264_consen 54 VPDYVRNPEKWTKYSLDDVS 73 (115)
T ss_pred CCCCcCCcccceeeecCCCc
Confidence 44677999999999999983
No 27
>PF14932 HAUS-augmin3: HAUS augmin-like complex subunit 3
Probab=29.47 E-value=6.1e+02 Score=26.26 Aligned_cols=115 Identities=17% Similarity=0.251 Sum_probs=62.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchh-hccccchhhH----HHHHHhhhHHHhhhhHH
Q 042046 15 KNHGIENLISARKALKVSLEKSKSLALALERAGPRLDDINQRLPSLEA-AVRPIRADKD----ALVAVGGHINRAVGPAA 89 (687)
Q Consensus 15 ~~~~~~~~~A~~~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~-~i~Pi~~~t~----~L~~~~~nI~~tl~~~~ 89 (687)
.+..++.++..++.|++..+.-.++.+.+..++..+..-...|...+. +...+..... .+..+....+..++.+.
T Consensus 66 ~e~~le~Le~el~~l~~~~~~~~~~~~~lq~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~k~~~~l~~l~~~v~ 145 (256)
T PF14932_consen 66 EEEDLEALEEELEALQEYKELYEQLRNKLQQLDSSLSQELSELEGKEEEAQKKLKKAQKELSAECSKLNNELNQLLGEVS 145 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366777888888888877777777777666433443333333322221 2112222222 22234445555555555
Q ss_pred HHHHHhhhhhccccccccCC-----CCChhhHHHHHHHHHHHHH-Hhhh
Q 042046 90 AVLKVFDAVHGLEKSLLSDP-----RNDLPGYLSVLKRLEEALR-FLGD 132 (687)
Q Consensus 90 ~vl~~~~~~~~~e~~i~~gp-----~~~l~~Yl~al~~L~~al~-~l~~ 132 (687)
.+...+.....-++ .+| ..++.+|+..-+.--.++. |+++
T Consensus 146 ~l~~~~~~~~~~~~---~~~~~flsq~~l~~Y~~~ee~~t~~L~~y~kK 191 (256)
T PF14932_consen 146 KLASELAHAHSGQQ---QNPPVFLSQMPLEQYLSQEEQFTKYLTSYTKK 191 (256)
T ss_pred HHHHHHHHhccccc---CCCCchhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 55555554333211 123 3589999998888777776 4443
No 28
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=26.84 E-value=3.9e+02 Score=32.79 Aligned_cols=50 Identities=20% Similarity=0.315 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccc--cChHHHHHHHHHHHHHHHHHHHHHHH
Q 042046 570 RDLVKKRLKAFNDALDDVYKKQSNWVI--LDKDLREKTSQLITQAIAPIYRSYMQ 622 (687)
Q Consensus 570 r~~iKekfk~FN~~Fee~~~~q~~w~V--pD~~LR~~Lr~~i~~~V~PaY~~F~~ 622 (687)
++.|-.-.|.-| |++++.+|-.-.+ .-| |.+.+|.+....|||+|.+=-+
T Consensus 1014 kenI~ql~KSkn--l~dtvar~i~~~~Qtsg~-lQ~a~resm~SsviPafEKScq 1065 (1283)
T KOG1916|consen 1014 KENINQLLKSKN--LEDTVARQIQAQFQTSGP-LQEALRESMESSVIPAFEKSCQ 1065 (1283)
T ss_pred HHHHHHHHhhcc--HHHHHHHHHHHHHhccch-HHHHHHHHhhhhccHHHHHHHH
Confidence 455555566666 8888766644444 244 9999999999999999986443
No 29
>PF11887 DUF3407: Protein of unknown function (DUF3407); InterPro: IPR024516 This entry represents a domain of unknown function found at the C terminus of many proteins in the mammalian cell entry family.
Probab=24.43 E-value=3e+02 Score=28.78 Aligned_cols=78 Identities=19% Similarity=0.290 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhhCCchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHhhh
Q 042046 20 ENLISARKALKVSLE-KSKSLALALERAGPRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDA 97 (687)
Q Consensus 20 ~~~~A~~~~L~~~L~-ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~ 97 (687)
+++.+.+..|.+.|. +-.++...+..++..|..++.++..+.+.|.=+..-+..+......|..++..+..+......
T Consensus 13 ~kLn~tL~ala~Al~GrG~~lg~~l~~l~~~l~~ln~~~~~l~~~l~~l~~v~~~~a~aapdL~~~l~~~~~~s~tL~~ 91 (267)
T PF11887_consen 13 AKLNATLSALATALDGRGEQLGETLDDLNTLLATLNPRLPQLREDLRNLADVADTYADAAPDLLDALDNLTTTSRTLVD 91 (267)
T ss_pred HHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 455666666666664 334455555555588888888888888887777777888888888888888877666555543
No 30
>PF06825 HSBP1: Heat shock factor binding protein 1; InterPro: IPR009643 Heat shock factor binding protein 1 (HSBP1) appears to be a negative regulator of the heat shock response [].; PDB: 3CI9_A.
Probab=24.29 E-value=92 Score=24.32 Aligned_cols=39 Identities=18% Similarity=0.357 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhccccch
Q 042046 28 ALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPIRA 69 (687)
Q Consensus 28 ~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi~~ 69 (687)
+|++--.|=..++++|. .++..+..|+-.||++|.-+-.
T Consensus 11 lL~qmq~kFq~mS~~I~---~riDeM~~RIDdLE~si~dl~~ 49 (54)
T PF06825_consen 11 LLQQMQDKFQTMSDQIL---GRIDEMSSRIDDLEKSIADLMT 49 (54)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCHHHH-----
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHhhHHHHHHHHHHHHH
Confidence 44555567778888888 7888888899999988765543
No 31
>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins. The proteins, which include HI1498 and Gp25, from phage Mu, are currently uncharacterised.
Probab=22.39 E-value=2.5e+02 Score=24.97 Aligned_cols=64 Identities=22% Similarity=0.278 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhc--cccchhhHHHHHHhhhHHHhhhhHHH
Q 042046 27 KALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAV--RPIRADKDALVAVGGHINRAVGPAAA 90 (687)
Q Consensus 27 ~~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i--~Pi~~~t~~L~~~~~nI~~tl~~~~~ 90 (687)
..+.--|.++..-...+.+....+...+.|+..+|..+ +|-+.+...|+..=.++...+..+++
T Consensus 21 ~~~~~~l~~~~a~~~~~~~l~~~~~~~~~Rl~~lE~~l~~LPt~~dv~~L~l~l~el~G~~~~l~~ 86 (106)
T PF10805_consen 21 GIFWLWLRRTYAKREDIEKLEERLDEHDRRLQALETKLEHLPTRDDVHDLQLELAELRGELKELSA 86 (106)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhHHHHHHH
Confidence 33444455544445555555567778888888888876 46577777666555555444444433
No 32
>TIGR00996 Mtu_fam_mce virulence factor Mce family protein. Members of this paralogous family are found as six tandem homologous proteins in the same orientation per cassette, in four separate cassettes in Mycobacterium tuberculosis. The six members of each cassette represent six subfamilies. One subfamily includes the protein mce (mycobacterial cell entry), a virulence protein required for invasion of non-phagocytic cells.
Probab=21.69 E-value=3.1e+02 Score=28.67 Aligned_cols=48 Identities=15% Similarity=0.172 Sum_probs=27.1
Q ss_pred CchHHHhhhcccchhhccccchhhHHHHHHhhhHHHhhhhHHHHHHHh
Q 042046 48 PRLDDINQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVF 95 (687)
Q Consensus 48 ~~L~~~~~rL~~le~~i~Pi~~~t~~L~~~~~nI~~tl~~~~~vl~~~ 95 (687)
..+..+.++...+.+.+.-+..-+..+......|..++..+..+.+..
T Consensus 178 ~l~~~l~~~~~~i~~ll~~l~~l~~~l~~~~~~l~~~v~~l~~~~~~l 225 (291)
T TIGR00996 178 QLTAALNARDGDIGALIDNLNRVLDVLADRSDQLDRLLDNLATLTAQL 225 (291)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 444444555555555544444445666666666666666666655544
No 33
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].
Probab=21.30 E-value=3.1e+02 Score=25.81 Aligned_cols=25 Identities=16% Similarity=0.085 Sum_probs=11.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 042046 18 GIENLISARKALKVSLEKSKSLALA 42 (687)
Q Consensus 18 ~~~~~~A~~~~L~~~L~ks~~l~~~ 42 (687)
++..++.++..+.+.|..++.....
T Consensus 43 K~~~lE~eld~~~~~l~~~k~~lee 67 (143)
T PF12718_consen 43 KNQQLEEELDKLEEQLKEAKEKLEE 67 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444444444444444333
No 34
>KOG4117 consensus Heat shock factor binding protein [Transcription; Posttranslational modification, protein turnover, chaperones]
Probab=21.23 E-value=71 Score=25.59 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCchHHHhhhcccchhhcccc
Q 042046 28 ALKVSLEKSKSLALALERAGPRLDDINQRLPSLEAAVRPI 67 (687)
Q Consensus 28 ~L~~~L~ks~~l~~~~~~~~~~L~~~~~rL~~le~~i~Pi 67 (687)
+|++.-.|-+.+++++. .+...+..|.-.||+.|.-+
T Consensus 24 lLQq~QDkFQtMSDQII---~RiDDM~~riDDLEKnIaDL 60 (73)
T KOG4117|consen 24 LLQQTQDKFQTMSDQII---GRIDDMSSRIDDLEKNIADL 60 (73)
T ss_pred HHHHHHHHHHHHHHHHH---HHHhhhhhhhHHHHHHHHHH
Confidence 56666778888898888 88888888888888876544
No 35
>PF10158 LOH1CR12: Tumour suppressor protein; InterPro: IPR018780 This entry represents a region of 130 amino acids that is the most conserved part of some hypothetical proteins involved in loss of heterozygosity, and thus, tumour suppression []. The exact function of these proteins is not known.
Probab=20.42 E-value=3.8e+02 Score=24.91 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=23.3
Q ss_pred cchhhHHHHHHhhhHHHhhhhHHHHHHHhhhhhccccc
Q 042046 67 IRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKS 104 (687)
Q Consensus 67 i~~~t~~L~~~~~nI~~tl~~~~~vl~~~~~~~~~e~~ 104 (687)
|+.-...|++.+.+++.++..++.+-...-....+|+.
T Consensus 89 v~els~~L~~~~~lL~~~v~~ie~LN~~LP~~~RLep~ 126 (131)
T PF10158_consen 89 VNELSQQLSRCQSLLNQTVPSIETLNEILPEEERLEPF 126 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhhcCCCC
Confidence 44445566666666666666666666666655555554
Done!