Query 042047
Match_columns 83
No_of_seqs 104 out of 453
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 23:22:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wmh_B Partitioning defective- 96.8 0.0024 8.3E-08 40.4 5.0 54 10-69 22-76 (86)
2 1vd2_A Protein kinase C, IOTA 96.0 0.011 3.7E-07 37.3 4.6 44 9-57 19-62 (89)
3 1q1o_A Cell division control p 95.6 0.026 8.8E-07 36.3 5.1 60 8-68 25-85 (98)
4 2kkc_A Sequestosome-1; P62, PB 95.5 0.022 7.5E-07 36.7 4.6 39 16-59 42-80 (102)
5 2ktr_A Sequestosome-1; autopha 95.2 0.033 1.1E-06 36.9 4.7 39 15-58 56-94 (117)
6 1pqs_A Cell division control p 94.4 0.055 1.9E-06 33.2 4.1 60 8-68 4-64 (77)
7 1oey_J P40-PHOX, neutrophil cy 93.0 0.21 7.2E-06 32.7 5.1 40 11-58 28-67 (107)
8 2bkf_A Zinc-finger protein NBR 91.4 0.42 1.4E-05 30.1 5.0 34 15-56 27-60 (87)
9 1wj6_A KIAA0049 protein, RSGI 89.7 0.37 1.3E-05 31.2 3.7 45 14-68 34-78 (101)
10 1oey_A P67-PHOX, neutrophil cy 81.3 2.9 9.9E-05 25.8 4.5 58 10-73 18-78 (83)
11 1e8p_A Endoglucanase, dockerin 79.1 0.61 2.1E-05 26.3 0.8 14 42-55 19-32 (46)
12 2npt_A Dual specificity mitoge 67.0 16 0.00055 23.5 5.4 49 2-57 23-71 (106)
13 2j4m_A Endoglucanase 45A; dock 56.7 2.4 8.3E-05 27.3 0.1 13 43-55 21-33 (100)
14 3o27_A Putative uncharacterize 42.7 13 0.00046 22.2 1.8 19 38-56 41-59 (68)
15 2cu1_A Mitogen-activated prote 40.0 34 0.0012 22.0 3.6 28 14-50 26-53 (103)
16 3ubm_A COAT2, formyl-COA:oxala 36.2 29 0.001 26.8 3.3 27 44-70 292-325 (456)
17 2yim_A Probable alpha-methylac 32.0 8.4 0.00029 28.8 -0.3 65 6-70 180-254 (360)
18 4ed9_A CAIB/BAIF family protei 31.0 26 0.00087 26.4 2.2 63 6-70 200-272 (385)
19 2dt7_A Splicing factor 3A subu 28.2 6.7 0.00023 20.8 -1.1 17 56-72 7-23 (38)
20 1cz6_A Protein (androctonin); 27.8 30 0.001 16.8 1.4 18 66-83 2-24 (26)
21 3sb1_A Hydrogenase expression 24.5 56 0.0019 22.2 2.8 35 38-72 110-154 (160)
22 1fqj_C Retinal ROD rhodopsin-s 23.9 20 0.00069 19.4 0.4 8 59-66 23-30 (42)
23 2g04_A Probable fatty-acid-COA 23.6 65 0.0022 23.9 3.2 64 6-70 182-256 (359)
24 3c8c_A Methyl-accepting chemot 23.3 34 0.0011 21.6 1.4 34 39-72 204-238 (240)
25 3k7i_B IHH, HHG-2, indian hedg 22.7 37 0.0013 23.9 1.6 36 7-49 133-168 (187)
26 1yel_A AT1G16640; CESG, protei 22.3 72 0.0025 19.1 2.8 27 38-66 48-74 (104)
27 3c6v_A Probable tautomerase/de 22.3 1.2E+02 0.0041 19.9 4.1 38 18-60 104-141 (161)
28 1v58_A Thiol:disulfide interch 22.2 58 0.002 22.1 2.5 17 43-59 39-55 (241)
29 2fwh_A Thiol:disulfide interch 21.9 70 0.0024 19.0 2.7 29 43-71 94-126 (134)
30 3pt3_A E3 ubiquitin-protein li 21.4 47 0.0016 21.2 1.8 19 9-27 90-108 (118)
31 2a1k_A GP32 single stranded DN 21.1 49 0.0017 24.0 2.0 21 12-32 202-222 (233)
32 2db1_A Heterogeneous nuclear r 20.6 84 0.0029 18.8 2.8 31 48-78 14-57 (118)
33 3a9l_A Poly-gamma-glutamate hy 20.5 1.7E+02 0.0058 20.7 4.8 32 13-55 5-36 (216)
34 1jss_A Stard4, cholesterol-reg 20.2 59 0.002 21.7 2.2 48 5-55 10-57 (224)
No 1
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=96.79 E-value=0.0024 Score=40.37 Aligned_cols=54 Identities=19% Similarity=0.245 Sum_probs=40.5
Q ss_pred eccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecCC-ChhHHhhccc
Q 042047 10 INLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGDV-PWQTFIESVQ 69 (83)
Q Consensus 10 iDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD~-PW~~F~~~vk 69 (83)
+|-+...+|++|+..++++|.+ ....+.+.|.|.+||++-+-.. =..+=+.++|
T Consensus 22 ~d~~~~~~fe~f~~lv~~lh~L------~~~~f~i~Y~D~dGDLlpInnDdnl~~Al~~a~ 76 (86)
T 1wmh_B 22 LPRASVSGFQEFSRLLRAVHQI------PGLDVLLGYTDAHGDLLPLTNDDSLHRALASGP 76 (86)
T ss_dssp EEGGGCCCHHHHHHHHHHHTTC------TTCCCEEEEECTTSCEEECCSHHHHHHHTTSSS
T ss_pred ccCCCCCCHHHHHHHHHHHcCC------CCCCEEEEEECCCCCEeeecCHHHHHHHHHhCC
Confidence 4555678999999999999985 2368999999999999987543 3333334444
No 2
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=96.00 E-value=0.011 Score=37.33 Aligned_cols=44 Identities=25% Similarity=0.277 Sum_probs=34.6
Q ss_pred eeccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEec
Q 042047 9 KINLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAG 57 (83)
Q Consensus 9 kiDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvG 57 (83)
.+.+..--+|++|..++.++|.... ...+++.|.|.|||+.-+-
T Consensus 19 ~~~v~~~i~~~~L~~kv~~~~~~~~-----~~~f~lky~DEeGD~itis 62 (89)
T 1vd2_A 19 ITHFEPSISFEGLCNEVRDMCSFDN-----EQLFTMKWIDEEGDPCTVS 62 (89)
T ss_dssp EEEECTTCCHHHHHHHHHHHTTCCS-----SCCEEEEECCSSSCCEECC
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCC-----CCeEEEEEECCCCCccccc
Confidence 3444445699999999999999742 3579999999999987653
No 3
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=95.56 E-value=0.026 Score=36.34 Aligned_cols=60 Identities=17% Similarity=0.329 Sum_probs=46.5
Q ss_pred eeeccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecC-CChhHHhhcc
Q 042047 8 RKINLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGD-VPWQTFIESV 68 (83)
Q Consensus 8 RkiDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD-~PW~~F~~~v 68 (83)
|.|=...-=+|++|..++.+-|..+... +.+...++-|+|.|||+..+++ .=|++=+.++
T Consensus 25 ~~i~V~~~i~f~~L~~kI~~Kl~~~~~~-~i~~~~klkYkDEdGD~Vtl~sddDl~~A~e~~ 85 (98)
T 1q1o_A 25 FTLLVEKVWNFDDLIMAINSKISNTHNN-NISPITKIKYQDEDGDFVVLGSDEDWNVAKEML 85 (98)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHCSS-CCCCCCCEEEECSSSCEEEECSHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHHHHHcCCccc-cccceeEEEEEcCCCCEEEEcCHHHHHHHHHHH
Confidence 5566667778999999999999987221 1135689999999999988876 5788777765
No 4
>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B
Probab=95.47 E-value=0.022 Score=36.73 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecCC
Q 042047 16 NSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGDV 59 (83)
Q Consensus 16 ~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD~ 59 (83)
.+|++|...+.++|..-. +..|.+.|.|.|||..-+...
T Consensus 42 ~s~~~L~~~V~~lFp~l~-----~~~f~l~Y~DedGDlItiSsD 80 (102)
T 2kkc_A 42 GPCERLLSRVAVLFPALR-----PGGFQAHYRAERGDLVAFSSD 80 (102)
T ss_dssp CHHHHHHHHHHHHCTTSC-----SSCEEEEEECTTCCEEEECSH
T ss_pred ccHHHHHHHHHHHccccC-----CCcEEEEEECCCCCEEEecCH
Confidence 589999999999997322 357999999999999887653
No 5
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=95.16 E-value=0.033 Score=36.85 Aligned_cols=39 Identities=18% Similarity=0.298 Sum_probs=32.2
Q ss_pred CCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecC
Q 042047 15 YNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGD 58 (83)
Q Consensus 15 ~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD 58 (83)
-.+|++|...+.++|..- .+..|++.|.|.|||+.-+..
T Consensus 56 ~~s~~~L~~kV~~lFp~L-----~~~~f~l~YkDEdGDlItISs 94 (117)
T 2ktr_A 56 PGPSERLLSRVAVLFPAL-----RPGGFQAHYRAERGDLVAFSS 94 (117)
T ss_dssp CCHHHHHHHHHHHHCTTS-----CSSCEEEEEECTTCCEEEECS
T ss_pred CCCHHHHHHHHHHHcccc-----CCCcEEEEEECCCCCEEEecC
Confidence 469999999999999632 235799999999999987765
No 6
>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A
Probab=94.41 E-value=0.055 Score=33.17 Aligned_cols=60 Identities=17% Similarity=0.326 Sum_probs=44.9
Q ss_pred eeeccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecC-CChhHHhhcc
Q 042047 8 RKINLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGD-VPWQTFIESV 68 (83)
Q Consensus 8 RkiDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD-~PW~~F~~~v 68 (83)
+.|=...-=+|++|...+.+-|... ...+.+...++-|+|.|||+...++ .=|++=+.++
T Consensus 4 ~~i~V~~~i~f~~L~~kI~~kl~~~-~~~~~~~~~~lkYkDEdGD~Vti~sddDl~~A~~~~ 64 (77)
T 1pqs_A 4 FTLLVEKVWNFDDLIMAINSKISNT-HNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEML 64 (77)
T ss_dssp EEEECTTCCCSHHHHHHHHHHTTTT-TSSCSCSTTCCEEEETTTEEEECCSTTHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHccc-ccccccceeEEEEEcCCCCEEEEcCHHHHHHHHHHH
Confidence 3444556668999999999999975 2212246789999999999987776 5788777765
No 7
>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=92.97 E-value=0.21 Score=32.66 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=34.1
Q ss_pred ccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecC
Q 042047 11 NLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGD 58 (83)
Q Consensus 11 DL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD 58 (83)
||+..-+|.+|..-..+-|.. .+..|-|+|.|||+.-+=|
T Consensus 28 dl~~~P~ykdLl~lmr~~F~~--------~DIaLNYrD~eGDLIrild 67 (107)
T 1oey_J 28 DLSSTPLLKDLLELTRREFQR--------EDIALNYRDAEGDLVRLLS 67 (107)
T ss_dssp CTTCCCCHHHHHHHHHHHHCC--------SSEEEEEECTTSCEEECCS
T ss_pred ccccCCCHHHHHHHHHHHhcc--------cceeeeeecCCCCEEEEcc
Confidence 678888999999999999983 5779999999999986644
No 8
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=91.43 E-value=0.42 Score=30.13 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEe
Q 042047 15 YNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIA 56 (83)
Q Consensus 15 ~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlv 56 (83)
--++++|...+...|++ +.++|.|.|.|||-.-|
T Consensus 27 ~~tweel~~mvk~~f~L--------~~~~ikY~DEenD~v~i 60 (87)
T 2bkf_A 27 NTTWADIEAMVKVSFDL--------NTIQIKYLDEENEEVSI 60 (87)
T ss_dssp GCCHHHHHHHHHHHHTC--------SSEEEEEECTTSCEEEE
T ss_pred CCCHHHHHHHHHHHcCC--------CceEEEEEcCCCCEEEE
Confidence 67899999999999998 46799999999998876
No 9
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=89.72 E-value=0.37 Score=31.16 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecCCChhHHhhcc
Q 042047 14 LYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGDVPWQTFIESV 68 (83)
Q Consensus 14 ~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD~PW~~F~~~v 68 (83)
.--++++|...+...|++ +.++|.|.|.|||-.-| ..+.+|-..+
T Consensus 34 ~~~tweel~~mvk~~f~L--------~~~~IkY~DEenD~V~i--~Sq~E~eEAl 78 (101)
T 1wj6_A 34 ENTTWADIEAMVKVSFDL--------NTIQIKYLDEENEEVSI--NSQGEYEEAL 78 (101)
T ss_dssp TTSCHHHHHHHHHHHHCC--------SSBCCEEECTTSCEECC--CSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCC--------CceEEEEecCCCCEEEE--ecHHHHHHHH
Confidence 367899999999999998 36799999999999888 4566665543
No 10
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=81.25 E-value=2.9 Score=25.78 Aligned_cols=58 Identities=5% Similarity=0.038 Sum_probs=43.4
Q ss_pred eccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEc-CCCCeEEecCCChhHHhhc--cceeEE
Q 042047 10 INLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQD-KEGDWLIAGDVPWQTFIES--VQRLEI 73 (83)
Q Consensus 10 iDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D-~eGD~mlvGD~PW~~F~~~--vkrl~I 73 (83)
|....=-+|.+|...|.+-+.... ..-+|-|.| .+|.+.+.+|.-++.=... --||++
T Consensus 18 irvp~~~~y~~L~~~l~~kL~l~~------~~~~LsYk~~~s~~~vi~~d~dl~~aw~~~~n~~LtL 78 (83)
T 1oey_A 18 MKTQPGLPYSQVRDMVSKKLELRL------EHTKLSYRPRDSNELVPLSEDSMKDAWGQVKNYCLTL 78 (83)
T ss_dssp EEECTTCCHHHHHHHHHHHTTCCG------GGCCEEECCTTCSSCEECCTTTHHHHHTTCBTTEEEE
T ss_pred EECCCCCCHHHHHHHHHHHhCCCc------ceeEEEeeCCCCCCeeccChHHHHHHHHhccCCcEEE
Confidence 444455689999999999988753 345899999 6788889999998877666 334544
No 11
>1e8p_A Endoglucanase, dockerin; cellulose docking domain, cellulase; NMR {Piromyces equi} SCOP: g.55.1.1 PDB: 1e8q_A
Probab=79.13 E-value=0.61 Score=26.28 Aligned_cols=14 Identities=29% Similarity=0.776 Sum_probs=11.7
Q ss_pred eEEEEEcCCCCeEE
Q 042047 42 YTLTYQDKEGDWLI 55 (83)
Q Consensus 42 ~~l~Y~D~eGD~ml 55 (83)
-.|+|+|.+|+|=.
T Consensus 19 c~V~YtD~dG~WGV 32 (46)
T 1e8p_A 19 TKVEYTDASGQWGV 32 (46)
T ss_dssp SCEEEEETTEEEEE
T ss_pred ceEEEEcCCCcccc
Confidence 35999999999954
No 12
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=66.97 E-value=16 Score=23.47 Aligned_cols=49 Identities=10% Similarity=0.227 Sum_probs=34.2
Q ss_pred CCcceeeeeccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEec
Q 042047 2 EGVGIARKINLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAG 57 (83)
Q Consensus 2 eG~~igRkiDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvG 57 (83)
+|.++-=+||-..+=++..+..++.+..... .--..-|+|.+||..-|-
T Consensus 23 ~~g~vDwaV~~~~~L~FrDvL~~I~~vmP~a-------T~TAFeYEDE~gDRITVR 71 (106)
T 2npt_A 23 NSGAVDWTVHSGPQLLFRDVLDVIGQVLPEA-------TTTAFEYEDEDGDRITVR 71 (106)
T ss_dssp TTEEEEEEECC--CCCHHHHHHHHHHHSTTS-------CCSEEEEECTTSCEEEEC
T ss_pred CCCccccccCCcccccHHHHHHHHHHhCccc-------eeeeeeeccccCCeeEEc
Confidence 3556666777667778888888887765432 234778999999998874
No 13
>2j4m_A Endoglucanase 45A; dockerin, cellulosome, protein binding, small cysteine-rich; NMR {Piromyces equi} PDB: 2j4n_A
Probab=56.67 E-value=2.4 Score=27.28 Aligned_cols=13 Identities=31% Similarity=0.884 Sum_probs=11.3
Q ss_pred EEEEEcCCCCeEE
Q 042047 43 TLTYQDKEGDWLI 55 (83)
Q Consensus 43 ~l~Y~D~eGD~ml 55 (83)
.|+|+|.+|||=.
T Consensus 21 ~V~YtD~dG~WGV 33 (100)
T 2j4m_A 21 KVEYTDASGQWGV 33 (100)
T ss_dssp CCCEESSSCEEEE
T ss_pred eEEEEcCCCccce
Confidence 6999999999854
No 14
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=42.66 E-value=13 Score=22.25 Aligned_cols=19 Identities=21% Similarity=0.503 Sum_probs=15.8
Q ss_pred CCCceEEEEEcCCCCeEEe
Q 042047 38 RGVRYTLTYQDKEGDWLIA 56 (83)
Q Consensus 38 ~~~~~~l~Y~D~eGD~mlv 56 (83)
.+-.+.+.++|++|+..|+
T Consensus 41 ~gD~fel~ve~kdgeIvLc 59 (68)
T 3o27_A 41 PDDTFILNMEQKDGDIVLS 59 (68)
T ss_dssp TTCCEEEEEEEETTEEEEE
T ss_pred CCCEEEEEEecCCCeEEEE
Confidence 3468899999999998876
No 15
>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=40.01 E-value=34 Score=21.96 Aligned_cols=28 Identities=21% Similarity=0.259 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCC
Q 042047 14 LYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKE 50 (83)
Q Consensus 14 ~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~e 50 (83)
.-=+|++|...+..+||- .-.+.|+|+|
T Consensus 26 RPv~f~eL~~Kv~~~fGq---------~ldL~y~n~E 53 (103)
T 2cu1_A 26 RPVKLEDLRSKAKIAFGQ---------SMDLHYTNNE 53 (103)
T ss_dssp SSCCHHHHHHHHHHHHSS---------CEEEEECSSS
T ss_pred CCccHHHHHHHHHHHhCC---------eeeEEEecce
Confidence 334799999999999994 4467777666
No 16
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=36.22 E-value=29 Score=26.78 Aligned_cols=27 Identities=11% Similarity=0.228 Sum_probs=20.9
Q ss_pred EEEEc----CCCCeEEec---CCChhHHhhccce
Q 042047 44 LTYQD----KEGDWLIAG---DVPWQTFIESVQR 70 (83)
Q Consensus 44 l~Y~D----~eGD~mlvG---D~PW~~F~~~vkr 70 (83)
=+|+- +||-|+.++ |--|+.||..+-+
T Consensus 292 ~~y~t~~~~~DG~~i~i~~~~~~~w~~l~~~lg~ 325 (456)
T 3ubm_A 292 WILKCKGWETDDNAYIYCTVQEQDWGPTCEAIGK 325 (456)
T ss_dssp EEEECTTTTTCTTCEEEEECCSTTHHHHHHHTTC
T ss_pred CccccCCCCCCCCEEEEEeCCHHHHHHHHHHhCc
Confidence 37999 999866654 5579999987765
No 17
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=32.04 E-value=8.4 Score=28.84 Aligned_cols=65 Identities=15% Similarity=0.242 Sum_probs=37.9
Q ss_pred eeeeeccCCCCCHHHHHHHHHHHHhhhhhcc---c----CCCceEEEEEcCCCCeEEec---CCChhHHhhccce
Q 042047 6 IARKINLSLYNSFETLANSLIHMFATYQKSE---K----RGVRYTLTYQDKEGDWLIAG---DVPWQTFIESVQR 70 (83)
Q Consensus 6 igRkiDL~~~~sY~~L~~~L~~MF~~~~~~~---~----~~~~~~l~Y~D~eGD~mlvG---D~PW~~F~~~vkr 70 (83)
-|+.||++++++--.+.......+...+... . ...-+.=+|+-+||-|+.++ |--|+.||..+-+
T Consensus 180 ~Gq~Vdvsl~d~~~~~~~~~~~~~~~~g~~~~r~g~~~~~~~p~y~~y~t~DG~~i~i~~~~~~~w~~l~~~lg~ 254 (360)
T 2yim_A 180 KGQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQFYAAMLAGLGL 254 (360)
T ss_dssp CCEEEEEEHHHHHHHHTHHHHHHHHTTSCCSSTTCSTTTTCSTTEEEEECTTSCEEEEECCSHHHHHHHHHHHTC
T ss_pred CceEEEeeHHHHHHHHhHHHHHHHHcCCCCCCCCCCCCCCCCCCCCeEECCCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 4788999987765554433322222211110 0 11121347999999888776 3459999987654
No 18
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=30.98 E-value=26 Score=26.43 Aligned_cols=63 Identities=13% Similarity=0.203 Sum_probs=35.5
Q ss_pred eeeeeccCCCCCHHHHHHHHHHHHhhhhhcc-------cCCCceEEEEEcCCCCeEEecCC---ChhHHhhccce
Q 042047 6 IARKINLSLYNSFETLANSLIHMFATYQKSE-------KRGVRYTLTYQDKEGDWLIAGDV---PWQTFIESVQR 70 (83)
Q Consensus 6 igRkiDL~~~~sY~~L~~~L~~MF~~~~~~~-------~~~~~~~l~Y~D~eGD~mlvGD~---PW~~F~~~vkr 70 (83)
-|+.||++++.+--.+.......+...+... ....-|. +|+-+|| |+.++-. -|+.||..+-+
T Consensus 200 ~Gq~Vdvsl~d~~~~~~~~~~~~~~~~g~~~~r~g~~~~~~~py~-~y~t~DG-~i~v~~~~~~~w~~l~~~lg~ 272 (385)
T 4ed9_A 200 KGQHIDMALFDCMSGVLANQAMNYLASGKSPKRMGNAHPNIAPYQ-TLSVSDG-YFIIACGNDGQFGKLSTLLGI 272 (385)
T ss_dssp CCEEEEEEHHHHHHHTCHHHHHHHHHHSSCCCCCTTSCSSSSSEE-EEEETTE-EEEEECCSHHHHHHHHHHTTC
T ss_pred CceEEEeeHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCcc-ceecCCC-cEEEEeCCHHHHHHHHHHcCC
Confidence 4788999887665443322111121111110 0112344 8999999 7766543 59999987765
No 19
>2dt7_A Splicing factor 3A subunit 3; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.20 E-value=6.7 Score=20.75 Aligned_cols=17 Identities=12% Similarity=0.460 Sum_probs=13.6
Q ss_pred ecCCChhHHhhccceeE
Q 042047 56 AGDVPWQTFIESVQRLE 72 (83)
Q Consensus 56 vGD~PW~~F~~~vkrl~ 72 (83)
.|..||++|-+-+|.|+
T Consensus 7 sg~~~f~~FY~rlk~Ik 23 (38)
T 2dt7_A 7 SGPNEFAEFYNRLKQIK 23 (38)
T ss_dssp CSCCHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHH
Confidence 45669999999888775
No 20
>1cz6_A Protein (androctonin); peptide, beta sheet, toxin; NMR {Androctonus australis} SCOP: j.3.1.3
Probab=27.79 E-value=30 Score=16.76 Aligned_cols=18 Identities=22% Similarity=0.425 Sum_probs=12.1
Q ss_pred hccceeEEeeCC-----ccccCC
Q 042047 66 ESVQRLEILRCG-----AVESRP 83 (83)
Q Consensus 66 ~~vkrl~I~~~~-----~~~~r~ 83 (83)
+.++.|+|++.. .|..||
T Consensus 2 svcrqikicrrrggcyykctnrp 24 (26)
T 1cz6_A 2 SVCRQIKICRRRGGCYYKCTNRP 24 (26)
T ss_dssp CCCCEEEECCSSSCCEEEECCCC
T ss_pred cHhhhhHHHHhcCceEEEccCCC
Confidence 357889998865 455555
No 21
>3sb1_A Hydrogenase expression protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, HUPH, unkno function; HET: PGE; 1.67A {Thiobacillus denitrificans}
Probab=24.48 E-value=56 Score=22.20 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=26.3
Q ss_pred CCCceEEEEEcCCCC----eEEecCCCh------hHHhhccceeE
Q 042047 38 RGVRYTLTYQDKEGD----WLIAGDVPW------QTFIESVQRLE 72 (83)
Q Consensus 38 ~~~~~~l~Y~D~eGD----~mlvGD~PW------~~F~~~vkrl~ 72 (83)
-..-|.|.|.|.+|. .+-||++|= ++|..|+.||+
T Consensus 110 ~~GVWrV~~~ns~~~~ildtIEV~~vP~va~Aa~EDi~dS~~rL~ 154 (160)
T 3sb1_A 110 FPGVWWIIHRNAQGAVTTQFIEVAFVPELVKSPRADVAAARAALV 154 (160)
T ss_dssp STTEEEEEEECTTSCEEEEEEEESSSCGGGSCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCEEeeEEEEeCCCHHHhcCcchHHHHHHHHH
Confidence 346899999997775 467999996 46777776663
No 22
>1fqj_C Retinal ROD rhodopsin-sensitive CGMP 3',5'- cyclic phosphodiesterase gamma-subunit...; RGS9, transducin, effector, pdegamma, G protein; HET: GDP; 2.02A {Bos taurus} SCOP: j.51.1.1
Probab=23.91 E-value=20 Score=19.41 Aligned_cols=8 Identities=38% Similarity=1.194 Sum_probs=6.1
Q ss_pred CChhHHhh
Q 042047 59 VPWQTFIE 66 (83)
Q Consensus 59 ~PW~~F~~ 66 (83)
.||+.|-.
T Consensus 23 CPWEAf~~ 30 (42)
T 1fqj_C 23 CPWEAFNH 30 (42)
T ss_dssp CGGGGGTT
T ss_pred cchHhcCc
Confidence 59998853
No 23
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=23.59 E-value=65 Score=23.94 Aligned_cols=64 Identities=11% Similarity=0.322 Sum_probs=37.4
Q ss_pred eeeeeccCCCCCHHHHHHHHHHHHhhhhh-c-cc--C----CCceEEEEEcCCCCeEEecC---CChhHHhhccce
Q 042047 6 IARKINLSLYNSFETLANSLIHMFATYQK-S-EK--R----GVRYTLTYQDKEGDWLIAGD---VPWQTFIESVQR 70 (83)
Q Consensus 6 igRkiDL~~~~sY~~L~~~L~~MF~~~~~-~-~~--~----~~~~~l~Y~D~eGD~mlvGD---~PW~~F~~~vkr 70 (83)
-|+.||++++++--.+.......+.. +. . .. + ..-+-=+|+-+||-|+.++- --|+.||..+-+
T Consensus 182 ~Gq~Vdvsl~d~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~y~~y~t~DG~~i~i~~~~~~~w~~l~~~lg~ 256 (359)
T 2g04_A 182 VGQVVDAAMVDGVSVLAQMMWTMKGI-GSLRDQRESFLLDGGAPFYRCYETSDGKYMAVGAIEPQFFAALLSGLGL 256 (359)
T ss_dssp CCCEEEEEHHHHHHHHTHHHHHHHHH-TCCCSSSSCSSSSSCSTTEEEEECTTSCEEEEECCSHHHHHHHHHHTTC
T ss_pred CceEEEecHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCCCCCCCCCCeEECCCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 47889999887655544332222221 11 0 00 1 11123479999998888763 359999987654
No 24
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=23.27 E-value=34 Score=21.60 Aligned_cols=34 Identities=18% Similarity=0.428 Sum_probs=25.5
Q ss_pred CCceEEEEEcC-CCCeEEecCCChhHHhhccceeE
Q 042047 39 GVRYTLTYQDK-EGDWLIAGDVPWQTFIESVQRLE 72 (83)
Q Consensus 39 ~~~~~l~Y~D~-eGD~mlvGD~PW~~F~~~vkrl~ 72 (83)
+..+.+.|.-- ..+|.++.-+|..++...+++++
T Consensus 204 g~~~~~~~~~~~~~~W~vv~~~p~~~~~~~~~~~~ 238 (240)
T 3c8c_A 204 GKPYAVSFSDVEGEDWYVGVVIDEEIAYAALDELR 238 (240)
T ss_dssp TEEEEEEEEECTTSSEEEEEEECHHHHHHHHHHHH
T ss_pred CEEEEEEEEecCCCCeEEEEEeCHHHHHHHHHHHh
Confidence 34566777654 45899999999999988887654
No 25
>3k7i_B IHH, HHG-2, indian hedgehog protein; alpha+beta sandwich, autocatalytic cleavage, cell membrane, developmental protein, disease mutation; 1.44A {Homo sapiens} PDB: 3k7g_B 3k7j_B 3k7h_B 3n1f_A 3n1m_B 3n1o_A 3n1p_B 3m1n_A 3mxw_A 3ho5_H 1vhh_A 3d1m_A 3n1r_A 2wg4_A 2wfx_A 2wfq_A 2wfr_A 2wg3_A*
Probab=22.74 E-value=37 Score=23.89 Aligned_cols=36 Identities=14% Similarity=0.289 Sum_probs=24.8
Q ss_pred eeeeccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcC
Q 042047 7 ARKINLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDK 49 (83)
Q Consensus 7 gRkiDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~ 49 (83)
||.||++..+...+-+-.|+.|-.. .+-+|+. |+.+
T Consensus 133 GRAvDIttsdrd~~k~g~LarLAve------AGFDwV~-Y~sr 168 (187)
T 3k7i_B 133 GRAVDITTSDRDRNKYGLLARLAVE------AGFDWVY-YESK 168 (187)
T ss_dssp TCEEEEEETTCCGGGHHHHHHHHHH------TTCSEEE-EEET
T ss_pred ceeeEEEecccchhHHHHHHHHHHH------cCCCEEE-eccC
Confidence 8999999977666656666666552 2467775 7764
No 26
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=22.34 E-value=72 Score=19.08 Aligned_cols=27 Identities=15% Similarity=0.512 Sum_probs=19.7
Q ss_pred CCCceEEEEEcCCCCeEEecCCChhHHhh
Q 042047 38 RGVRYTLTYQDKEGDWLIAGDVPWQTFIE 66 (83)
Q Consensus 38 ~~~~~~l~Y~D~eGD~mlvGD~PW~~F~~ 66 (83)
.+..|.+.|.-..+...+-+ =|+.|+.
T Consensus 48 ~G~~W~v~~~~~~~~~~l~~--GW~~Fv~ 74 (104)
T 1yel_A 48 SGRSWTVRMKKRGEKVFLTV--GWENFVK 74 (104)
T ss_dssp TSCEEEEEEEEETTEEEECT--THHHHHH
T ss_pred CCCEEEEEEEEECCcEEEcc--ChHHHHH
Confidence 56889999875556655543 4999985
No 27
>3c6v_A Probable tautomerase/dehalogenase AU4130; aspergillus fumigatus trimeric thermophilic probable tautomerase/dehalogenase; HET: MSE; 1.90A {Aspergillus fumigatus AF293}
Probab=22.28 E-value=1.2e+02 Score=19.92 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEEecCCC
Q 042047 18 FETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLIAGDVP 60 (83)
Q Consensus 18 Y~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~mlvGD~P 60 (83)
|..|...|+.-+++.. ..-++.+-+...+||.+-|-.|
T Consensus 104 ~~~l~~~L~~~~gi~~-----~dv~I~I~E~~~e~Wsf~G~~~ 141 (161)
T 3c6v_A 104 LKRIDAFLTPMFEPKG-----IDWEYFVTEAPRDLWKINGLAP 141 (161)
T ss_dssp HHHHHHHHHHHHGGGT-----CEEEEEEEEECGGGCEETTBCC
T ss_pred HHHHHHHHHHHcCCCh-----hhEEEEEEEcCccceEECCCcC
Confidence 3444444444444422 2345666678899999988763
No 28
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=22.24 E-value=58 Score=22.09 Aligned_cols=17 Identities=24% Similarity=0.433 Sum_probs=15.6
Q ss_pred EEEEEcCCCCeEEecCC
Q 042047 43 TLTYQDKEGDWLIAGDV 59 (83)
Q Consensus 43 ~l~Y~D~eGD~mlvGD~ 59 (83)
.++|.|.+|..++.|++
T Consensus 39 ~i~y~~~dg~~~i~G~l 55 (241)
T 1v58_A 39 VTIYLTPDGKHAISGYM 55 (241)
T ss_dssp EEEEECTTSSCEEESCC
T ss_pred eEEEEeCCCCEEEEEEE
Confidence 69999999999999984
No 29
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=21.91 E-value=70 Score=19.04 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=23.0
Q ss_pred EEEEEcCCCCeE----EecCCChhHHhhcccee
Q 042047 43 TLTYQDKEGDWL----IAGDVPWQTFIESVQRL 71 (83)
Q Consensus 43 ~l~Y~D~eGD~m----lvGD~PW~~F~~~vkrl 71 (83)
.+.+-|++|... ++|-.+.+.|.+.++++
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 566678999875 89999999988877654
No 30
>3pt3_A E3 ubiquitin-protein ligase UBR5; EDD, HHYD, mixed alpha-beta fold, ubiquitin ligase; 1.97A {Homo sapiens}
Probab=21.37 E-value=47 Score=21.16 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=16.8
Q ss_pred eeccCCCCCHHHHHHHHHH
Q 042047 9 KINLSLYNSFETLANSLIH 27 (83)
Q Consensus 9 kiDL~~~~sY~~L~~~L~~ 27 (83)
.++|-.|+||+.|...|..
T Consensus 90 ~L~LP~Y~s~e~L~~kL~~ 108 (118)
T 3pt3_A 90 RLYVPLYSSKQILKQKLLL 108 (118)
T ss_dssp EEEEECCSSHHHHHHHHHH
T ss_pred eeECCCCCCHHHHHHHHHH
Confidence 4899999999999999864
No 31
>2a1k_A GP32 single stranded DNA binding protein; Zn2+ binding subdomain, 5-stranded beta-sheet, OB fold; 2.00A {Enterobacteria phage RB69} SCOP: b.40.4.7 PDB: 2atq_B* 1gpc_A
Probab=21.06 E-value=49 Score=23.99 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=17.8
Q ss_pred cCCCCCHHHHHHHHHHHHhhh
Q 042047 12 LSLYNSFETLANSLIHMFATY 32 (83)
Q Consensus 12 L~~~~sY~~L~~~L~~MF~~~ 32 (83)
-+.|.||++|..+|.+..++.
T Consensus 202 p~~FKsye~L~~rl~~vmg~~ 222 (233)
T 2a1k_A 202 KDKFKSFEELNTKFNQVLGTA 222 (233)
T ss_dssp GGGSCCHHHHHHHHHHHHTC-
T ss_pred hhhcCCHHHHHHHHHHHhCcC
Confidence 457999999999999998875
No 32
>2db1_A Heterogeneous nuclear ribonucleoprotein F; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.57 E-value=84 Score=18.77 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=21.9
Q ss_pred cCCCCeEEecCCChh--------HHhh--c---cceeEEeeCCc
Q 042047 48 DKEGDWLIAGDVPWQ--------TFIE--S---VQRLEILRCGA 78 (83)
Q Consensus 48 D~eGD~mlvGD~PW~--------~F~~--~---vkrl~I~~~~~ 78 (83)
+.++-.++||..||. .|-. . |..++|+...+
T Consensus 14 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~~~~v~~v~i~~~~~ 57 (118)
T 2db1_A 14 GGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTRE 57 (118)
T ss_dssp BCCCCEEEEESCCTTCCHHHHHHHTTTSCBTTGGGGEEEEECSS
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHcCCccCceeEEEEECCC
Confidence 456778999999996 2422 2 78888887654
No 33
>3a9l_A Poly-gamma-glutamate hydrolase; zinc ION binding, open alpha/beta mixed core structure; 1.90A {Bacillus phage PHINIT1}
Probab=20.54 E-value=1.7e+02 Score=20.71 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEE
Q 042047 13 SLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLI 55 (83)
Q Consensus 13 ~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~ml 55 (83)
-.|.||.+|.+. +..+.+|.+.|+|..-+...
T Consensus 5 D~Y~sf~eL~~~-----------e~~~~Dy~I~~~~~~s~~~v 36 (216)
T 3a9l_A 5 DTYPNIEALENA-----------ETVGVAYNIEVKRQNPSMIY 36 (216)
T ss_dssp CSSSSHHHHHHH-----------SCBTTTEEEEEEECCSSEEE
T ss_pred CcCCCHHHHHhc-----------cccCCCeEEEEEcCCCceEE
Confidence 368888888765 11357899999998555443
No 34
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=20.19 E-value=59 Score=21.73 Aligned_cols=48 Identities=17% Similarity=0.247 Sum_probs=20.6
Q ss_pred ceeeeeccCCCCCHHHHHHHHHHHHhhhhhcccCCCceEEEEEcCCCCeEE
Q 042047 5 GIARKINLSLYNSFETLANSLIHMFATYQKSEKRGVRYTLTYQDKEGDWLI 55 (83)
Q Consensus 5 ~igRkiDL~~~~sY~~L~~~L~~MF~~~~~~~~~~~~~~l~Y~D~eGD~ml 55 (83)
..|+++=+.....|.++++.+.+.+....+.. ..+|.+.++. +|..+.
T Consensus 10 ~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~~~--~~~W~~~~~~-~gv~vy 57 (224)
T 1jss_A 10 QIGRKIKLEGLSDVASISTKLQNTLIQYHSIE--EDEWRVAKKA-KDVTVW 57 (224)
T ss_dssp --------------CTHHHHHHHHHHHHTTSC--GGGCEEEEEE-TTEEEE
T ss_pred ccccceeeeeCcCHHHHHHHHHHHHHHHhhhC--CCCCEEEEEC-CCEEEE
Confidence 46788777777889999998887666443321 3567777654 444433
Done!