BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042048
(286 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1
SV=1
Length = 624
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/244 (72%), Positives = 215/244 (88%), Gaps = 7/244 (2%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
LPFDRHLS Q+V+K+VSEADGYQPHLIAPEQGYRRLI+ AL YFRGPAEASVDAVH+VLK
Sbjct: 381 LPFDRHLSLQSVKKIVSEADGYQPHLIAPEQGYRRLIEGALGYFRGPAEASVDAVHYVLK 440
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
ELVR+SI ET+ELKRFP+LQ E+AAAAN +LE+FR++SKK+ +RLV+MES+YLT +FFRK
Sbjct: 441 ELVRKSISETEELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRK 500
Query: 170 LPQDIER----VGNPTA-PSAA--DRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVH 222
LPQ+IER N TA PS+A D+Y +GHFRRI SNVS+YV MVS+TL+NTIPKA V+
Sbjct: 501 LPQEIERPVTNSKNQTASPSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVY 560
Query: 223 CQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
CQV++AK +LL++FY+Q+ K+EGKQL QLLDEDP LM+RR +CAKRLELYK ARDEID+V
Sbjct: 561 CQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAV 620
Query: 283 SWTR 286
+W R
Sbjct: 621 AWVR 624
>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1
SV=2
Length = 614
Score = 356 bits (914), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 175/250 (70%), Positives = 215/250 (86%), Gaps = 4/250 (1%)
Query: 39 LIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPA 97
+ DH L + LPFDRHLS +NV+KVVSEADGYQPHLIAPEQGYRRLID +++YF+GPA
Sbjct: 364 VFDHQLPAALKKLPFDRHLSTKNVQKVVSEADGYQPHLIAPEQGYRRLIDGSISYFKGPA 423
Query: 98 EASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEM 157
EA+VDAVHFVLKELVR+SI ET+ELKRFPTL S+IAAAANEALERFRD+S+KT +RLV+M
Sbjct: 424 EATVDAVHFVLKELVRKSISETEELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDM 483
Query: 158 ESSYLTVDFFRKLPQDIERVG-NP-TAPSA-ADRYTEGHFRRIGSNVSSYVGMVSETLKN 214
ESSYLTV+FFRKL + E+ NP AP+ AD Y++ HFR+IGSNVS+Y+ MV +TL+N
Sbjct: 484 ESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSDNHFRKIGSNVSAYINMVCDTLRN 543
Query: 215 TIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKS 274
++PKAVV+CQV+EAKRSLL+ FYAQ+G+KE ++L +LDEDP LMERR AKRLELYK
Sbjct: 544 SLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQ 603
Query: 275 ARDEIDSVSW 284
ARD+ID+V+W
Sbjct: 604 ARDDIDAVAW 613
>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2
SV=2
Length = 612
Score = 348 bits (892), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 158/237 (66%), Positives = 203/237 (85%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
LPFDRHLS Q+V+++VSE+DGYQPHLIAPE GYRRLI+ +LN+FRGPAEASV+A+H +LK
Sbjct: 376 LPFDRHLSLQSVKRIVSESDGYQPHLIAPELGYRRLIEGSLNHFRGPAEASVNAIHLILK 435
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
ELVR++I ET+ELKRFP+LQ E+ AAAN +L++FR++S K+ +RLV+MESSYLTVDFFRK
Sbjct: 436 ELVRKAIAETEELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRK 495
Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
L + + + + SA D+Y +GHFR+I SNV++Y+ MV+ETL NTIPKAVVHCQV++AK
Sbjct: 496 LHVESQNMSLSSPTSAIDQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAK 555
Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
SLL++FYAQ+ + +GK+L QLLDE+P LMERR QCAKRLELYK ARDEID+ W R
Sbjct: 556 LSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVWVR 612
>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1
Length = 610
Score = 318 bits (816), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/237 (62%), Positives = 197/237 (83%), Gaps = 1/237 (0%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
L FD+ LS +N+RK+++EADGYQPHLIAPEQGYRRLI+S+L RGPAEA+VDAVH +LK
Sbjct: 375 LQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLK 434
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
+LV ++I ET +LK++P L+ E+ AAA ++LER RD+SK+ T++LV+ME YLTVDFFRK
Sbjct: 435 DLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRK 494
Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
LPQD+++ GNPT S DRY + + RRIG+ + SYV MV TL+N+IPK++V+CQV+EAK
Sbjct: 495 LPQDVDKGGNPTH-SIFDRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAK 553
Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
RSLLDHF+ +LGK E K+L+ LL+EDP +MERR AKRLELY+SA+ EID+V+W++
Sbjct: 554 RSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610
>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2
SV=1
Length = 610
Score = 316 bits (809), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/260 (58%), Positives = 205/260 (78%), Gaps = 2/260 (0%)
Query: 28 GDWDGHQKRSLLIDHGLFEVIM-LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLI 86
G G +K + + D+ I L FD+HLS NVRK+++EADGYQPHLIAPEQGYRRLI
Sbjct: 352 GTRSGGEKINSVFDNQFPAAIKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLI 411
Query: 87 DSALNYFRGPAEASVDAVHFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDD 146
+S L RGPAEA+VDAVH +LK+L+ +S+GET ELK++PTL+ E++ AA ++L+R RD+
Sbjct: 412 ESCLVSIRGPAEAAVDAVHSILKDLIHKSMGETSELKQYPTLRVEVSGAAVDSLDRMRDE 471
Query: 147 SKKTTMRLVEMESSYLTVDFFRKLPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVG 206
S+K T+ LV+MES YLTV+FFRKLPQD E+ GNPT S DRY + + RRIGSNV SYV
Sbjct: 472 SRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTH-SIFDRYNDAYLRRIGSNVLSYVN 530
Query: 207 MVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCA 266
MV L+N+IPK++V+CQV+EAKRSLLD F+ +LG+KE +L++LLDEDP + +RR A
Sbjct: 531 MVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIA 590
Query: 267 KRLELYKSARDEIDSVSWTR 286
KRLELY+SA+ +I++V+W++
Sbjct: 591 KRLELYRSAQTDIEAVAWSK 610
>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1
SV=3
Length = 610
Score = 315 bits (808), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/237 (61%), Positives = 194/237 (81%), Gaps = 1/237 (0%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
L FD+ L+ N+RK+V+EADGYQPHLIAPEQGYRRLI+S++ RGPAEASVD VH +LK
Sbjct: 375 LQFDKQLAMDNIRKLVTEADGYQPHLIAPEQGYRRLIESSIVSIRGPAEASVDTVHAILK 434
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
+LV +S+ ET ELK++P L+ E+ AA E+L++ R+ SKK T++LV+ME SYLTVDFFRK
Sbjct: 435 DLVHKSVNETVELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRK 494
Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
LPQD+E+ GNPT S DRY + + RRIGSNV SYV MV L+N+IPK++V+CQV+EAK
Sbjct: 495 LPQDVEKGGNPTH-SIFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAK 553
Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
RSLLDHF+A+LG + K+L+ LL+EDP +MERR +KRLELY++A+ EID+V+W++
Sbjct: 554 RSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAWSK 610
>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1
Length = 610
Score = 313 bits (801), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 143/237 (60%), Positives = 197/237 (83%), Gaps = 1/237 (0%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
L FD+ LS +N+RK+++EADGYQPHLIAPEQGYRRLI+S+L RGPAE++VDAVH +LK
Sbjct: 375 LQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAESAVDAVHSLLK 434
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
+LV +++ ET +LK++P L+ E+ AA+ ++LER RD+SK+ T++LV+ME YLTVDFFRK
Sbjct: 435 DLVHKAMSETLDLKQYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRK 494
Query: 170 LPQDIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK 229
LPQD+++ GNPT S DRY + + RRIG+ + SYV MV TL+++IPK++V+CQV+EAK
Sbjct: 495 LPQDVDKGGNPTH-SICDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAK 553
Query: 230 RSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 286
RSLLDHF+ +LGK E K+L+ LL+EDP +MERR AKRLELY+SA+ EID+V+W++
Sbjct: 554 RSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610
>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2
Length = 920
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 77/121 (63%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
LP DRH NV+++V EADGYQP+LI+PE+G R LI + L + PA VD VH VL
Sbjct: 378 LPLDRHFDLNNVKRIVLEADGYQPYLISPEKGLRSLIKTVLELAKDPARLCVDEVHRVLV 437
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
++V S T L R+P + E+ A A+ AL+ F++++KK + LV+ME +++ F +
Sbjct: 438 DIVSASANATPGLGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIR 497
Query: 170 L 170
L
Sbjct: 498 L 498
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 191 EGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQ 250
E R + V YV V +L +PKAVV CQV+++K +L+ Y+ + +++
Sbjct: 734 EEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIES 793
Query: 251 LLDEDPMLMERRQQCAKRLEL 271
L+ ED + RR + K+ L
Sbjct: 794 LIQEDQNVKRRRDRYQKQSSL 814
>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2
Length = 914
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 76/121 (62%)
Query: 50 LPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLK 109
LP DRH NV++VV EADGYQP+LI+PE+G R LI L + PA VD VH VL
Sbjct: 378 LPLDRHFDLNNVKRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCVDEVHRVLV 437
Query: 110 ELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVDFFRK 169
++V S T L R+P + E+ A A+ AL+ F++++KK + LV+ME +++ F +
Sbjct: 438 DIVSASANATPGLGRYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIR 497
Query: 170 L 170
L
Sbjct: 498 L 498
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 191 EGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQ 250
E R + V YV V +L +PKAVV CQV++AK +L+ Y+ + +++
Sbjct: 727 EEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIES 786
Query: 251 LLDEDPMLMERRQQCAKRLEL 271
L+ ED + RR++ K+ L
Sbjct: 787 LIQEDQNVKRRRERYQKQSSL 807
>sp|Q9URZ5|VPS1_SCHPO Vacuolar protein sorting-associated protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps1 PE=3 SV=2
Length = 678
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 109/294 (37%), Gaps = 70/294 (23%)
Query: 51 PFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVH----F 106
PFD + ++R ++ + G P L + ++ + P+ V ++
Sbjct: 393 PFD-EVKDSDIRTILYNSSGPSPSLFMGTAAFEVIVKQQIKRLEDPSLKCVSLIYDELVR 451
Query: 107 VLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV-- 164
+L +L++R I KR+P L+ E + + M +V ME SY+
Sbjct: 452 ILNQLLQRPI-----FKRYPLLKDEFYKVVIGFFRKCMQPTNTLVMDMVAMEGSYINTVH 506
Query: 165 -DFF--------------RKLPQDIER----VGNPTAP----SAADRYTEGHF------R 195
DF + +P D + NP P S++ + G F +
Sbjct: 507 PDFLSGHQAMAIVQSQNSKPIPVDPKTGKALTNNPVPPVETSSSSGQNFFGSFFGSKNKK 566
Query: 196 RIGSN---------------------------VSSYVGMVSETLKNTIPKAVVHCQVKEA 228
R+ + + SY +V TL + +PK++ +K +
Sbjct: 567 RLAAMEPPPPVLRASTTLSDREKTDTEVIKLLIMSYFNIVKRTLADMVPKSISLKMIKYS 626
Query: 229 KRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
K + QL K + +LL E + ++RR++C + +E A + + +V
Sbjct: 627 KEHIQHELLEQLYKSQA--FDKLLQESEVTVQRRKECEQMVESLLQASEIVSNV 678
>sp|P21576|VPS1_YEAST Vacuolar protein sorting-associated protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS1 PE=1
SV=2
Length = 704
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAK----RSLLDHFYAQLGKKEGKQ-LAQLLDED 255
+SSY +V T+ + IPKA++ + ++K + LL+ Y GKQ + +L E+
Sbjct: 625 ISSYFSIVKRTIADIIPKALMLKLIVKSKTDIQKVLLEKLY-------GKQDIEELTKEN 677
Query: 256 PMLMERRQQCAKRLELYKSARDEIDSV 282
+ ++RR++C K +E+ ++A + SV
Sbjct: 678 DITIQRRKECKKMVEILRNASQIVSSV 704
>sp|Q7SXN5|DNM1L_DANRE Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1
Length = 691
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRR- 114
L+ +V + A G +P L PE + L+ + P+ V+ VH ++ +++
Sbjct: 386 LTTIDVLTAIRNATGPRPALFVPEVSFELLVKRQVKRLEEPSLRCVELVHEEMQRIIQHC 445
Query: 115 SIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLT 163
S TQEL RFP L I L + + + LV +E +Y+
Sbjct: 446 SNYSTQELLRFPKLHDAIVEVVTSLLRKRLPVTNEMVHNLVAIELAYIN 494
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY +V + +++++PKAV+H V K SL QL K L LL E + +
Sbjct: 606 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSELVGQLYKP--ALLDDLLTESEDMAQ 663
Query: 261 RRQQCAKRLELYKSARDEIDSVSWT 285
RR + A L+ + A I + T
Sbjct: 664 RRNEAADMLKALQKASQVIAEIRET 688
>sp|P54861|DNM1_YEAST Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DNM1 PE=1 SV=1
Length = 757
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY ++ E +++ +PKAV+ V K S+ + +L K+ +LL ED L +
Sbjct: 677 IVSYFDIIREMIEDQVPKAVMCLLVNYCKDSVQNRLVTKLYKE--TLFEELLVEDQTLAQ 734
Query: 261 RRQQCAKRLELYKSARDEIDSV 282
R+ C K L +YK A I ++
Sbjct: 735 DRELCVKSLGVYKKAATLISNI 756
>sp|Q9UQ16|DYN3_HUMAN Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4
Length = 869
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + F+ + + + G + L P+ + ++ + +GP+ SVD
Sbjct: 372 FEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIA-AAANEALERFRDDSKKTTMRLVEMESSYLT 163
V++EL+ T++L FP L E AN ER +K + L++++ SY+
Sbjct: 430 -LVIQELINTVKKCTKKLANFPRLCEETERIVANHIRER-EGKTKDQVLLLIDIQVSYIN 487
Query: 164 VD 165
+
Sbjct: 488 TN 489
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 185 AADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKE 244
+ D E I + V SY+ ++++ +++ IPK ++H + K + AQL E
Sbjct: 650 SMDPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSE 709
Query: 245 GKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVS 283
+ L++E +RR + + + K A I +S
Sbjct: 710 DQN--TLMEESAEQAQRRDEMLRMYQALKEALGIIGDIS 746
>sp|Q8BZ98|DYN3_MOUSE Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1
Length = 863
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + F+ + + + G + L P+ + ++ + +GP+ SVD
Sbjct: 372 FEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIA-AAANEALERFRDDSKKTTMRLVEMESSYLT 163
V++EL+ T+ L FP L E AN ER +K + L++++ SY+
Sbjct: 430 -LVMQELINTVKKCTKRLANFPRLCEETERIVANHIRER-EGKTKDQVLLLIDIQVSYIN 487
Query: 164 VD 165
+
Sbjct: 488 TN 489
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 185 AADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKE 244
+ D E I + V SY+ ++++ +++ IPK ++H + K + AQL E
Sbjct: 644 SMDPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSE 703
Query: 245 GKQLAQLLDEDPMLMERRQQCAKRLELYK 273
D++ ++ E +Q +R E+ +
Sbjct: 704 --------DQNTLMEESAEQAQRRDEMLR 724
>sp|Q08877|DYN3_RAT Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2
Length = 869
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + F+ + + + G + L P+ + ++ + +GP+ SVD
Sbjct: 372 FEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIA-AAANEALERFRDDSKKTTMRLVEMESSYLT 163
V++EL+ T+ L FP L E AN ER +K + L++++ SY+
Sbjct: 430 -LVMQELINTVKKCTKRLANFPRLCEETERIVANHIRER-EGKTKDQVLLLIDIQVSYIN 487
Query: 164 VD 165
+
Sbjct: 488 TN 489
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 185 AADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKE 244
+ D E I + V SY+ ++++ +++ IPK ++H + K + AQL E
Sbjct: 650 SMDPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSE 709
Query: 245 GKQLAQLLDEDPMLMERRQQCAKRLELYK 273
D++ ++ E +Q +R E+ +
Sbjct: 710 --------DQNTLMEESVEQAQRRDEMLR 730
>sp|P39053|DYN1_MOUSE Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2
Length = 867
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + ++ + R P VD V
Sbjct: 372 FELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREPCLKCVDMV 431
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
L VR+ T++L+++P L+ E+ + +K+ M L+++E +Y+
Sbjct: 432 ISELISTVRQC---TKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNT 488
Query: 165 D 165
+
Sbjct: 489 N 489
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 173 DIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSL 232
+ E G+ + + D E I + V SY+ +V++T+++ +PK ++H + K +
Sbjct: 638 ETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFI 697
Query: 233 LDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYK 273
A L D++ ++ E +Q +R E+ +
Sbjct: 698 FSELLA--------NLYSCGDQNTLMEESAEQAQRRDEMLR 730
>sp|Q05193|DYN1_HUMAN Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2
Length = 864
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + ++ + R P VD V
Sbjct: 372 FELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREPCLKCVDMV 431
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
L VR+ T++L+++P L+ E+ + +K+ M L+++E +Y+
Sbjct: 432 ISELISTVRQC---TKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNT 488
Query: 165 D 165
+
Sbjct: 489 N 489
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 173 DIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSL 232
+ E G+ + + D E I + V SY+ +V++T+++ +PK ++H + K +
Sbjct: 638 ETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFI 697
Query: 233 LDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYK 273
A L D++ ++ E +Q +R E+ +
Sbjct: 698 FSELLA--------NLYSCGDQNTLMEESAEQAQRRDEMLR 730
>sp|O35303|DNM1L_RAT Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1
Length = 755
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRR- 114
L+ ++ + A G +P L PE + L+ + P+ V+ VH ++ +++
Sbjct: 400 LNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHC 459
Query: 115 SIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLT 163
S TQEL RFP L I L + + + LV +E +Y+
Sbjct: 460 SNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 508
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY +V + +++++PKAV+H V K +L QL K L LL E + +
Sbjct: 670 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYK--SSLLDDLLTESEDMAQ 727
Query: 261 RRQQCAKRLELYKSARDEIDSVSWT 285
RR++ A L+ + A I + T
Sbjct: 728 RRKEAADMLKALQGASQIIAEIRET 752
>sp|Q2KIA5|DNM1L_BOVIN Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1
Length = 749
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRR- 114
L+ ++ + A G +P L PE + L+ + P+ V+ VH ++ +++
Sbjct: 400 LNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHC 459
Query: 115 SIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLT 163
S TQEL RFP L I L + + + LV +E +Y+
Sbjct: 460 SNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 508
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY +V + +++++PKAV+H V K +L QL K L LL E + +
Sbjct: 664 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYK--SSLLDDLLTESEDMAQ 721
Query: 261 RRQQCAKRLELYKSARDEIDSVSWT 285
RR++ A L+ + A I + T
Sbjct: 722 RRKEAADMLKALQGASQIIAEIRET 746
>sp|O00429|DNM1L_HUMAN Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2
Length = 736
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRR- 114
L+ ++ + A G +P L PE + L+ + P+ V+ VH ++ +++
Sbjct: 387 LNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHC 446
Query: 115 SIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLT 163
S TQEL RFP L I L + + + LV +E +Y+
Sbjct: 447 SNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 495
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY +V + +++++PKAV+H V K +L QL K L LL E + +
Sbjct: 651 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYK--SSLLDDLLTESEDMAQ 708
Query: 261 RRQQCAKRLELYKSARDEIDSVSWT 285
RR++ A L+ + A I + T
Sbjct: 709 RRKEAADMLKALQGASQIIAEIRET 733
>sp|Q8K1M6|DNM1L_MOUSE Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2
Length = 742
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRR- 114
L+ ++ + A G +P L PE + L+ + P+ V+ VH ++ +++
Sbjct: 393 LNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHC 452
Query: 115 SIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLT 163
S TQEL RFP L I L + + + LV +E +Y+
Sbjct: 453 SNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYIN 501
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY +V + +++++PKAV+H V K +L QL K L LL E + +
Sbjct: 657 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYK--SSLLDDLLTESEDMAQ 714
Query: 261 RRQQCAKRLELYKSARDEIDSVSWT 285
RR++ A L+ + A I + T
Sbjct: 715 RRKEAADMLKALQGASQIIAEIRET 739
>sp|Q8LFT2|DRP3B_ARATH Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1
SV=2
Length = 780
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRS 115
L+ ++R + A G + L P+ + L+ ++ P S+ F+ ELV+ S
Sbjct: 403 LTADDIRTAIQNATGPRSALFVPDVPFEVLVRRQISRLLDP---SLQCARFIFDELVKIS 459
Query: 116 -IGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
+EL+RFP LQ + L + S+ L+EME Y+
Sbjct: 460 HQCMMKELQRFPVLQKRMDEVIGNFLREGLEPSQAMIRDLIEMEMDYINT 509
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
+ SY +V + +++ +PKA++H V KR L + F +L ++ + +LL E L
Sbjct: 661 LKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNVFIEKLYRE--NLIEELLKEPDELAI 718
Query: 261 RRQQCAKRLELYKSARDEIDSV 282
+R++ + L + + A +D +
Sbjct: 719 KRKRTQETLRILQQANRTLDEL 740
>sp|Q94464|DYNA_DICDI Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2
Length = 853
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 203 SYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLMERR 262
SY +V + +K+++PK+++H V ++K + + A L K+E E P + +R
Sbjct: 771 SYFNIVKKNVKDSVPKSIMHFLVNQSKEHIQNELVAALYKEELFDELLE--ESPQISSKR 828
Query: 263 QQCAKRLELYKSARDEIDSV 282
+ C +E+ + A + I+ +
Sbjct: 829 KSCKAMIEILRKANEIINEI 848
>sp|P39055|DYN1_CAEEL Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3
Length = 830
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 184 SAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKK 243
++ D E I + V SY+ ++++T+K+ +PKAV+H V + + D A
Sbjct: 643 TSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLA----- 697
Query: 244 EGKQLAQLLDEDPMLMERRQQCAKR---LELYKSARDEIDSVS 283
L Q D D ++ E + + KR L +Y + ++ + +S
Sbjct: 698 ---HLYQCGDTDALMEESQIEAQKREEMLRMYHACKEALRIIS 737
>sp|Q09748|YB68_SCHPO Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC12C2.08 PE=3 SV=1
Length = 781
Score = 37.7 bits (86), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 201 VSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDEDPMLME 260
++SY + + + + +PK ++H V +K ++ + ++L +++ LL ED +
Sbjct: 701 ITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQNRLVSKLYREDF--FDTLLIEDENVKS 758
Query: 261 RRQQCAKRLELYKSARDEIDSV 282
R++C + L +Y A I +V
Sbjct: 759 EREKCERLLSVYNQANKIISTV 780
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 54 RHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVR 113
++LS ++R + + G + L E + L+ LN P V+ V+ L ++
Sbjct: 415 QNLSTVDIRTAILNSTGSRATLFLSEMAFDILVKPQLNLLAAPCHQCVELVYEELMKICH 474
Query: 114 RSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTVD 165
S G++ ++ FP LQ+ + ++ L + L+ ++S+Y+ +
Sbjct: 475 YS-GDS-DISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYINTN 524
>sp|P27619|DYN_DROME Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2
Length = 877
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 187 DRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKR----SLLDHFYAQLGK 242
D E I + V SY+ +V++T ++ +PKA++ + AK LL H YA
Sbjct: 643 DPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLAHLYA---- 698
Query: 243 KEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSV 282
G Q AQ+++E RR++ L +Y++ +D + +
Sbjct: 699 -SGDQ-AQMMEESAESATRREEM---LRMYRACKDALQII 733
>sp|P21575|DYN1_RAT Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2
Length = 864
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/121 (18%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + + + + P+ VD V
Sbjct: 372 FELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMV 431
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
L +R+ +++L+++P L+ E+ + +K+ M L+++E +Y+
Sbjct: 432 VSELTSTIRKC---SEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNT 488
Query: 165 D 165
+
Sbjct: 489 N 489
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 173 DIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSL 232
+ E G+ + + D E I + V SY+ +V++T+++ +PK ++H + K +
Sbjct: 638 ETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFI 697
Query: 233 LDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYK 273
A L D++ ++ E +Q +R E+ +
Sbjct: 698 FSELLA--------NLYSCGDQNTLMEESAEQAQRRDEMLR 730
>sp|Q08DF4|DYN1_BOVIN Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1
Length = 856
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/121 (18%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + + + + P+ VD V
Sbjct: 372 FELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMV 431
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
L +R+ +++L+++P L+ E+ + +K+ M L+++E +Y+
Sbjct: 432 VSELTATIRKC---SEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNT 488
Query: 165 D 165
+
Sbjct: 489 N 489
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 173 DIERVGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSL 232
+ E G+ + + D E I + V SY+ +V++T+++ +PK ++H + K +
Sbjct: 638 ETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFI 697
Query: 233 LDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYK 273
A L D++ ++ E +Q +R E+ +
Sbjct: 698 FSELLA--------NLYSCGDQNTLMEESAEQAQRRDEMLR 730
>sp|P50570|DYN2_HUMAN Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2
Length = 870
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + ++ + + P VD
Sbjct: 372 FELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
V++EL+ T +L +P L+ E + +K + L+++E SY+
Sbjct: 430 -LVIQELINTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINT 488
Query: 165 D 165
+
Sbjct: 489 N 489
>sp|A6H7I5|DYN2_BOVIN Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1
Length = 866
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + ++ + + P VD
Sbjct: 372 FELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
V++EL+ T +L +P L+ E + +K + L+++E SY+
Sbjct: 430 -LVIQELINTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINT 488
Query: 165 D 165
+
Sbjct: 489 N 489
>sp|P39054|DYN2_MOUSE Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2
Length = 870
Score = 34.7 bits (78), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + ++ + + P VD
Sbjct: 372 FELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
V++EL+ T +L +P L+ E + +K + L+++E SY+
Sbjct: 430 -LVIQELISTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINT 488
Query: 165 D 165
+
Sbjct: 489 N 489
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 185 AADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK----RSLLDHFYAQL 240
+ D E I + V SYV ++++++++ +PK ++H + K LL + Y+
Sbjct: 644 SMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSA 703
Query: 241 GKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVS 283
+ + L++E +RR + K A + I +S
Sbjct: 704 DQ------SSLMEESAEQAQRRDDMLRMYHALKEALNIIGDIS 740
>sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1
SV=2
Length = 808
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 56 LSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKELVRRS 115
L+ ++R + A G + L P+ + L+ ++ P S+ F+ +EL++ S
Sbjct: 418 LTDDDIRTAIQNATGPRSALFVPDVPFEVLVRRQISRLLDP---SLQCARFIFEELIKIS 474
Query: 116 -IGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLT 163
EL+RFP L+ + + L + S+ +++ME Y+
Sbjct: 475 HRCMMNELQRFPVLRKRMDEVIGDFLREGLEPSEAMIGDIIDMEMDYIN 523
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 183 PSAADRYTEGHFRRIGSNVS-------SYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDH 235
P A R TE H + + SY +V + +++++PKA++H V KR L +
Sbjct: 652 PPAVLRPTETHSEQEAVEIQITKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNV 711
Query: 236 FYAQLGKKE-GKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEI----DSVS 283
F +L ++ +++ Q DE + +R Q+ L+ DE+ DSVS
Sbjct: 712 FIKKLYRENLFEEMLQEPDEIAVKRKRTQETLHVLQQAYRTLDELPLEADSVS 764
>sp|P39052|DYN2_RAT Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1
Length = 870
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 45 FEVIMLPFDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAV 104
FE++ + FD + + + G + L P+ + ++ + + P VD
Sbjct: 372 FELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVD-- 429
Query: 105 HFVLKELVRRSIGETQELKRFPTLQSEIAAAANEALERFRDDSKKTTMRLVEMESSYLTV 164
V++EL+ T +L +P L+ E + +K + L+++E SY+
Sbjct: 430 -LVIQELISTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINT 488
Query: 165 D 165
+
Sbjct: 489 N 489
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 185 AADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAK----RSLLDHFYAQL 240
+ D E I + V SYV ++++++++ +PK ++H + K LL + Y+
Sbjct: 644 SMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSA 703
Query: 241 GKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVS 283
+ + L++E +RR + K A + I +S
Sbjct: 704 DQ------SSLMEESAEQAQRRDDMLRMYHALKEALNIIGDIS 740
>sp|P46154|FADH_PSEPU Glutathione-independent formaldehyde dehydrogenase OS=Pseudomonas
putida GN=fdhA PE=1 SV=3
Length = 399
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 3 EIATGMKTLMDFPHLGGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSPQNVR 62
E+ TG+ ++ P GG +++GDW G Q LL+ + F ++ LP DR + + +R
Sbjct: 106 EMHTGVCLTVN-PARAGGAYGYVDMGDWTGGQAEYLLVPYADFNLLKLP-DRDKAMEKIR 163
Query: 63 KVVSEAD 69
+ +D
Sbjct: 164 DLTCLSD 170
>sp|Q5ZV69|TOLB_LEGPH Protein TolB OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tolB PE=3
SV=1
Length = 419
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 18 GGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSP--QNVRKVVSEADGYQPHL 75
GG SLEV D DGH +SLL+ E IM P SP +++ V E +
Sbjct: 163 GGRSRYSLEVADADGHNPQSLLVSS---EPIMSP---SWSPNGKSISYVSFEKKKAEIFT 216
Query: 76 IAPEQGYRRLIDSALNYFRGPAEASVDAVHFVL 108
++ E G RRLI S PA S D H +
Sbjct: 217 VSVETGQRRLITSFPGINGAPAW-SPDGQHLAV 248
>sp|A5IC68|TOLB_LEGPC Protein TolB OS=Legionella pneumophila (strain Corby) GN=tolB PE=3
SV=1
Length = 419
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 18 GGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSP--QNVRKVVSEADGYQPHL 75
GG SLEV D DGH +SLL+ E IM P SP +++ V E +
Sbjct: 163 GGRSRYSLEVADADGHNPQSLLVSS---EPIMSP---SWSPNGKSISYVSFEKKKAEIFT 216
Query: 76 IAPEQGYRRLIDSALNYFRGPAEASVDAVHFVL 108
++ E G RRLI S PA S D H +
Sbjct: 217 VSVETGQRRLITSFPGINGAPAW-SPDGQHLAV 248
>sp|Q5WWJ9|TOLB_LEGPL Protein TolB OS=Legionella pneumophila (strain Lens) GN=tolB PE=3
SV=1
Length = 419
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 18 GGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSP--QNVRKVVSEADGYQPHL 75
GG SLEV D DGH +SLL+ E IM P SP +++ V E +
Sbjct: 163 GGRSRYSLEVADADGHNPQSLLVSS---EPIMSP---SWSPNGKSISYVSFEKKKAEIFT 216
Query: 76 IAPEQGYRRLIDSALNYFRGPAEASVDAVHFVL 108
++ E G RRLI S PA S D H +
Sbjct: 217 VSVETGQRRLITSFPGINGAPAW-SPDGQHLAV 248
>sp|Q5X4Z1|TOLB_LEGPA Protein TolB OS=Legionella pneumophila (strain Paris) GN=tolB PE=3
SV=1
Length = 419
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 18 GGGLIVSLEVGDWDGHQKRSLLIDHGLFEVIMLPFDRHLSP--QNVRKVVSEADGYQPHL 75
GG SLEV D DGH +SLL+ E IM P SP +++ V E +
Sbjct: 163 GGRSRYSLEVADADGHNPQSLLVSS---EPIMSP---SWSPNGKSISYVSFEKKKAEIFT 216
Query: 76 IAPEQGYRRLIDSALNYFRGPAEASVDAVHFVL 108
++ E G RRLI S PA S D H +
Sbjct: 217 VSVETGQRRLITSFPGINGAPAW-SPDGRHLAV 248
>sp|Q6TKS7|MX_CTEID Interferon-induced GTP-binding protein Mx OS=Ctenopharyngodon
idella GN=mx PE=2 SV=1
Length = 627
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 189 YTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQL 248
+ R + ++++Y + S+ L N +P V + + + L + A +G+
Sbjct: 533 FISAEVREMAQHLTAYFMITSDHLANQVPLIVQYHILDQYISQLQNAMLAMIGRNNP--- 589
Query: 249 AQLLDEDPMLMERRQQCAKRLELYKSA 275
LL ED + +R++ +RLE KSA
Sbjct: 590 GMLLQEDSDVARKRRELKERLERLKSA 616
>sp|Q800G5|MXE_DANRE Interferon-induced GTP-binding protein MxE OS=Danio rerio GN=mxe
PE=2 SV=1
Length = 625
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 195 RRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRSLLDHFYAQLGKKEGKQLAQLLDE 254
R + +++SY+ + E L N IP V + + + L + +GK LL E
Sbjct: 537 REMAYHLTSYLTIACERLANQIPLIVQYHMLNQYISQLQNAMLGLIGKNSP---GMLLCE 593
Query: 255 DPMLMERRQQCAKRLELYKSA 275
D + +R+ +RLE KSA
Sbjct: 594 DSGVARKRKDLKERLERLKSA 614
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,654,940
Number of Sequences: 539616
Number of extensions: 4144117
Number of successful extensions: 11316
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 11245
Number of HSP's gapped (non-prelim): 81
length of query: 286
length of database: 191,569,459
effective HSP length: 116
effective length of query: 170
effective length of database: 128,974,003
effective search space: 21925580510
effective search space used: 21925580510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)