Query 042053
Match_columns 181
No_of_seqs 124 out of 1496
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 13:30:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042053.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042053hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.4E-46 5.2E-51 293.9 12.4 178 3-181 24-451 (489)
2 PLN00110 flavonoid 3',5'-hydro 100.0 1.1E-37 2.4E-42 248.6 12.9 101 2-102 28-138 (504)
3 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-37 2.5E-42 250.4 12.9 79 103-181 415-495 (543)
4 PLN02183 ferulate 5-hydroxylas 100.0 1.5E-37 3.2E-42 248.6 12.5 79 103-181 391-470 (516)
5 PLN02655 ent-kaurene oxidase 100.0 2.7E-37 5.8E-42 244.4 11.2 78 103-181 349-426 (466)
6 PLN02687 flavonoid 3'-monooxyg 100.0 4.4E-37 9.6E-42 245.9 12.5 100 3-102 32-141 (517)
7 PLN02394 trans-cinnamate 4-mon 100.0 6.5E-37 1.4E-41 244.3 12.6 79 103-181 381-461 (503)
8 PLN03234 cytochrome P450 83B1; 100.0 6.9E-37 1.5E-41 244.0 12.2 78 103-180 376-456 (499)
9 PTZ00404 cytochrome P450; Prov 100.0 2.8E-36 6E-41 239.6 11.6 73 103-180 371-444 (482)
10 KOG0158 Cytochrome P450 CYP3/C 100.0 1.2E-36 2.6E-41 237.3 9.0 78 103-181 381-459 (499)
11 PLN02500 cytochrome P450 90B1 100.0 1.4E-36 3.1E-41 241.7 8.4 79 103-181 371-455 (490)
12 PLN03141 3-epi-6-deoxocathaste 100.0 2.5E-36 5.5E-41 238.1 9.0 74 103-180 342-415 (452)
13 PLN03112 cytochrome P450 famil 100.0 1.5E-35 3.2E-40 237.1 13.2 79 103-181 384-466 (514)
14 PLN02966 cytochrome P450 83A1 100.0 1E-35 2.2E-40 237.4 11.7 78 103-180 379-457 (502)
15 PLN00168 Cytochrome P450; Prov 100.0 3.1E-35 6.7E-40 235.4 12.7 79 103-181 395-478 (519)
16 PF00067 p450: Cytochrome P450 100.0 1.9E-36 4.2E-41 237.3 4.6 79 103-181 350-428 (463)
17 PLN02774 brassinosteroid-6-oxi 100.0 2.7E-35 5.8E-40 232.9 8.3 75 103-180 354-428 (463)
18 PLN02290 cytokinin trans-hydro 100.0 3E-35 6.4E-40 235.4 8.4 75 103-180 402-477 (516)
19 PLN03018 homomethionine N-hydr 100.0 1.8E-34 3.9E-39 231.2 12.7 79 103-181 402-485 (534)
20 PLN02196 abscisic acid 8'-hydr 100.0 4.1E-35 8.8E-40 231.8 8.6 73 103-180 354-426 (463)
21 PLN02987 Cytochrome P450, fami 100.0 5.6E-34 1.2E-38 225.5 9.3 77 103-180 357-433 (472)
22 KOG0157 Cytochrome P450 CYP4/C 100.0 5.7E-34 1.2E-38 226.5 7.3 79 103-181 379-459 (497)
23 PLN02302 ent-kaurenoic acid ox 100.0 3.1E-33 6.7E-38 222.6 10.5 75 103-181 378-452 (490)
24 PLN02169 fatty acid (omega-1)- 100.0 2.9E-32 6.3E-37 217.2 8.1 78 104-181 384-463 (500)
25 KOG0159 Cytochrome P450 CYP11/ 100.0 3E-32 6.4E-37 209.9 7.8 78 103-181 404-481 (519)
26 PLN02738 carotene beta-ring hy 100.0 1.6E-30 3.5E-35 211.3 10.2 78 103-180 477-556 (633)
27 PLN02936 epsilon-ring hydroxyl 100.0 1.6E-30 3.5E-35 206.9 9.0 78 103-180 365-444 (489)
28 PLN03195 fatty acid omega-hydr 100.0 1.8E-30 3.9E-35 207.9 8.2 75 106-180 403-478 (516)
29 KOG0684 Cytochrome P450 [Secon 100.0 2.4E-28 5.3E-33 184.9 8.3 75 106-180 368-446 (486)
30 PLN02648 allene oxide synthase 99.9 3.4E-27 7.4E-32 186.6 8.4 75 103-180 361-448 (480)
31 PLN02426 cytochrome P450, fami 99.9 3E-26 6.6E-31 182.8 8.6 78 103-180 381-460 (502)
32 COG2124 CypX Cytochrome P450 [ 99.8 1.4E-21 3E-26 152.5 5.2 68 103-180 307-374 (411)
33 PF08492 SRP72: SRP72 RNA-bind 79.0 1.6 3.4E-05 24.5 1.6 9 136-144 43-51 (59)
34 COG2124 CypX Cytochrome P450 [ 69.1 4.4 9.5E-05 32.2 2.5 22 79-101 91-112 (411)
35 COG2101 SPT15 TATA-box binding 48.2 6.3 0.00014 27.3 0.1 36 134-169 35-70 (185)
36 KOG2404 Fumarate reductase, fl 48.0 3.2 7E-05 32.0 -1.4 114 28-145 147-263 (477)
37 cd04518 TBP_archaea archaeal T 44.1 7.4 0.00016 27.1 -0.1 35 134-168 29-63 (174)
38 PF11227 DUF3025: Protein of u 43.3 14 0.00031 26.5 1.3 17 124-140 195-211 (212)
39 KOG3506 40S ribosomal protein 43.1 11 0.00025 20.6 0.6 11 156-166 12-22 (56)
40 TIGR02115 potass_kdpF K+-trans 40.4 6.7 0.00015 18.0 -0.5 6 137-142 20-25 (26)
41 PF07886 BA14K: BA14K-like pro 40.0 25 0.00055 16.8 1.5 16 151-166 16-31 (31)
42 PRK00394 transcription factor; 36.0 13 0.00029 26.0 0.2 34 134-167 28-61 (179)
43 KOG0114 Predicted RNA-binding 35.6 65 0.0014 20.5 3.1 42 5-48 12-53 (124)
44 PLN00062 TATA-box-binding prot 33.3 13 0.00028 26.1 -0.2 35 134-168 29-63 (179)
45 cd00652 TBP_TLF TATA box bindi 33.3 14 0.0003 25.7 -0.1 35 134-168 29-63 (174)
46 PF00352 TBP: Transcription fa 29.5 9.6 0.00021 23.0 -1.2 35 134-168 31-65 (86)
47 cd04516 TBP_eukaryotes eukaryo 28.2 18 0.00039 25.2 -0.2 34 134-167 29-62 (174)
48 PF05953 Allatostatin: Allatos 25.2 46 0.00099 11.9 0.8 6 156-161 6-11 (11)
49 PF15442 DUF4629: Domain of un 25.1 32 0.00069 23.2 0.6 19 161-179 127-146 (150)
50 PF14459 Prok-E2_C: Prokaryoti 25.1 18 0.00039 23.0 -0.6 19 151-169 103-121 (131)
51 PF12508 DUF3714: Protein of u 24.6 61 0.0013 23.2 1.9 20 99-118 75-94 (200)
52 PF14510 ABC_trans_N: ABC-tran 24.5 26 0.00056 21.0 0.1 19 125-143 23-41 (85)
53 COG4282 SMI1 Protein involved 23.5 45 0.00098 23.1 1.1 18 2-19 106-127 (191)
54 KOG3302 TATA-box binding prote 20.8 37 0.0008 24.1 0.3 35 134-168 50-84 (200)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-46 Score=293.89 Aligned_cols=178 Identities=36% Similarity=0.666 Sum_probs=162.0
Q ss_pred CCCCCCCCCCCccccccCCCCCC-cHHHHHHHHHHhCCcEEEechHH----------HHHHHhhCCcCcCCCCc-hhhcc
Q 042053 3 RKQLPPGPRPYPVIRNLLELGEK-PHKSLAELAKIHGPIMSLKLASM----------AKSILLDHDSSFCNRTV-PRAMS 70 (181)
Q Consensus 3 ~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~v~~~~~~~~----------~~~~~~~~~~~~~~r~~-~~~~~ 70 (181)
++++||||.++|+|||++++... +|..+++++++||+|+.+|+|.. ++|++.+++..|++|+. .....
T Consensus 24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~ 103 (489)
T KOG0156|consen 24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK 103 (489)
T ss_pred CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence 47899999999999999999876 99999999999999999999997 89999999999999997 23445
Q ss_pred ccccCCcceeeecCCCchHHHHHhhhhccccc------------------------------------------------
Q 042053 71 SHQHYEFSLAWMPVSRPWKSLRKICNMHIFTN------------------------------------------------ 102 (181)
Q Consensus 71 ~~~~~~~~~~~~~~g~~w~~~r~~~~~~l~~~------------------------------------------------ 102 (181)
.+..++.+++++++|+.||.+||++...+++.
T Consensus 104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~ 183 (489)
T KOG0156|consen 104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRML 183 (489)
T ss_pred HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHH
Confidence 56656889999989999999999999888766
Q ss_pred --------------------------------------------------------------------------------
Q 042053 103 -------------------------------------------------------------------------------- 102 (181)
Q Consensus 103 -------------------------------------------------------------------------------- 102 (181)
T Consensus 184 fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~ 263 (489)
T KOG0156|consen 184 FGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEG 263 (489)
T ss_pred hCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 042053 103 -------------------------------------------------------------------------------- 102 (181)
Q Consensus 103 -------------------------------------------------------------------------------- 102 (181)
T Consensus 264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~ 343 (489)
T KOG0156|consen 264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLP 343 (489)
T ss_pred CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhc
Confidence
Q ss_pred ------------------------------eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCc
Q 042053 103 ------------------------------REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKN 152 (181)
Q Consensus 103 ------------------------------~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~ 152 (181)
++++||.|||||.|+++.|++|+||++|+||++|+||||++++ +.++..
T Consensus 344 ~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~ 422 (489)
T KOG0156|consen 344 KLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLD 422 (489)
T ss_pred cCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCc
Confidence 8999999999999999999999999999999999999999986 333356
Q ss_pred cceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 153 FELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 153 ~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
..++|||.|+|.|||..+|++|+.+++|+
T Consensus 423 ~~~iPFG~GRR~CpG~~La~~~l~l~la~ 451 (489)
T KOG0156|consen 423 FKLIPFGSGRRICPGEGLARAELFLFLAN 451 (489)
T ss_pred eEecCCCCCcCCCCcHHHHHHHHHHHHHH
Confidence 88999999999999999999999999873
No 2
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=1.1e-37 Score=248.58 Aligned_cols=101 Identities=34% Similarity=0.598 Sum_probs=79.1
Q ss_pred CCCCCCCCCCCCccccccCCCCCCcHHHHHHHHHHhCCcEEEechHH----------HHHHHhhCCcCcCCCCchhhccc
Q 042053 2 SRKQLPPGPRPYPVIRNLLELGEKPHKSLAELAKIHGPIMSLKLASM----------AKSILLDHDSSFCNRTVPRAMSS 71 (181)
Q Consensus 2 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~----------~~~~~~~~~~~~~~r~~~~~~~~ 71 (181)
.+.++||||.++|++|+++.+..+++..+.++.++||+|+++++++. +++++.++...|+.++.......
T Consensus 28 ~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~ 107 (504)
T PLN00110 28 PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH 107 (504)
T ss_pred ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence 46789999999999999988877789999999999999999999865 88999888888888875443332
Q ss_pred cccCCcceeeecCCCchHHHHHhhhhccccc
Q 042053 72 HQHYEFSLAWMPVSRPWKSLRKICNMHIFTN 102 (181)
Q Consensus 72 ~~~~~~~~~~~~~g~~w~~~r~~~~~~l~~~ 102 (181)
......+.+++.+|+.|+++|+++.+.+|+.
T Consensus 108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~ 138 (504)
T PLN00110 108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGG 138 (504)
T ss_pred hccCCCceeeCCCCHHHHHHHHHHHHHhCCH
Confidence 2222334555556999999999998654444
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=1.2e-37 Score=250.40 Aligned_cols=79 Identities=18% Similarity=0.315 Sum_probs=70.5
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccc--cCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDF--KGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~--~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.||||+.|++++|++||||++|+||++|+||||++++.+. ...+.+++|||+|+|.|+|++||++|+++++|
T Consensus 415 ~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la 494 (543)
T PLN02971 415 TTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLA 494 (543)
T ss_pred eeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999999999999764331 12456899999999999999999999999987
Q ss_pred C
Q 042053 181 Y 181 (181)
Q Consensus 181 ~ 181 (181)
+
T Consensus 495 ~ 495 (543)
T PLN02971 495 R 495 (543)
T ss_pred H
Confidence 3
No 4
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.5e-37 Score=248.60 Aligned_cols=79 Identities=34% Similarity=0.720 Sum_probs=70.8
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcc-ccCCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDID-FKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~-~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
++++||.|||||.|.++.|++||||++|+||++|+||||++++.+ ......+++|||+|+|+|+|++||++|++++||+
T Consensus 391 ~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ 470 (516)
T PLN02183 391 AEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAH 470 (516)
T ss_pred eeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999975542 2234568999999999999999999999999873
No 5
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=2.7e-37 Score=244.42 Aligned_cols=78 Identities=18% Similarity=0.397 Sum_probs=70.3
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
++++||.||||+.|+++.+++||||++|+||++|+||||++++.+.. ....++|||+|+|.|||++||++|+++++|+
T Consensus 349 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ 426 (466)
T PLN02655 349 TTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESA-DMYKTMAFGAGKRVCAGSLQAMLIACMAIAR 426 (466)
T ss_pred cccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccC-CcccccCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999997654322 3478999999999999999999999999863
No 6
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=4.4e-37 Score=245.91 Aligned_cols=100 Identities=39% Similarity=0.765 Sum_probs=79.6
Q ss_pred CCCCCCCCCCCccccccCCCCCCcHHHHHHHHHHhCCcEEEechHH----------HHHHHhhCCcCcCCCCchhhcccc
Q 042053 3 RKQLPPGPRPYPVIRNLLELGEKPHKSLAELAKIHGPIMSLKLASM----------AKSILLDHDSSFCNRTVPRAMSSH 72 (181)
Q Consensus 3 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~----------~~~~~~~~~~~~~~r~~~~~~~~~ 72 (181)
+.++||||.++|++||+..+..+++..+.++.++||+||+++++.. +++++.++...|.+++.......+
T Consensus 32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~ 111 (517)
T PLN02687 32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM 111 (517)
T ss_pred CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence 3468999999999999999887889999999999999999999876 889998888888887654433333
Q ss_pred ccCCcceeeecCCCchHHHHHhhhhccccc
Q 042053 73 QHYEFSLAWMPVSRPWKSLRKICNMHIFTN 102 (181)
Q Consensus 73 ~~~~~~~~~~~~g~~w~~~r~~~~~~l~~~ 102 (181)
...+.+++++.+|+.|+++|+++.+.+|+.
T Consensus 112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~ 141 (517)
T PLN02687 112 AYNYQDLVFAPYGPRWRALRKICAVHLFSA 141 (517)
T ss_pred ccCCceeEeCCCCHHHHHHHHHHHHHhCCH
Confidence 323445667766999999999998444554
No 7
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=6.5e-37 Score=244.34 Aligned_cols=79 Identities=29% Similarity=0.603 Sum_probs=70.1
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcc--ccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDID--FKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.||+||.|.+++|++|+||++|+||++|+||||++++.+ ......+++|||+|+|+|+|++||++|+++++|
T Consensus 381 ~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (503)
T PLN02394 381 AKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLG 460 (503)
T ss_pred cccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 667999999999999999999999999999999999999976432 122356899999999999999999999999987
Q ss_pred C
Q 042053 181 Y 181 (181)
Q Consensus 181 ~ 181 (181)
+
T Consensus 461 ~ 461 (503)
T PLN02394 461 R 461 (503)
T ss_pred H
Confidence 3
No 8
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=6.9e-37 Score=243.99 Aligned_cols=78 Identities=35% Similarity=0.701 Sum_probs=70.1
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcC-CCCCccCCccccCCCcc--ccCCccceecccCCCccCCChHHHHHHHHhhh
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESIL-DNAHYFTPERLLGSDID--FKGKNFELIPFGAGWQIYPGLPLAIKMLYLGF 179 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l 179 (181)
++++||.|||||.|.++.+++||||++| +||++|+||||+++... ....+..++|||+|+|+|+|++||++|+++++
T Consensus 376 ~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l 455 (499)
T PLN03234 376 AKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPF 455 (499)
T ss_pred eeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHH
Confidence 6789999999999999999999999999 89999999999976432 22346789999999999999999999999998
Q ss_pred c
Q 042053 180 S 180 (181)
Q Consensus 180 ~ 180 (181)
|
T Consensus 456 a 456 (499)
T PLN03234 456 A 456 (499)
T ss_pred H
Confidence 6
No 9
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=2.8e-36 Score=239.61 Aligned_cols=73 Identities=33% Similarity=0.527 Sum_probs=68.2
Q ss_pred eeE-ccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REI-AGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~-~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
+++ +||.||||+.|.++.+++|+||++|+||++|+||||++++ .+.+++|||+|+|+|+|++||++|+++++|
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la 444 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFS 444 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHH
Confidence 788 9999999999999999999999999999999999999753 346899999999999999999999999986
No 10
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-36 Score=237.27 Aligned_cols=78 Identities=23% Similarity=0.356 Sum_probs=73.1
Q ss_pred eeEc-cEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 103 REIA-GFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 103 ~~~~-g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
.++. ++.|+||+.|+|++|++||||++||||++|+||||++++.+.. ++.+|+|||.|||.|+|++||.+|+|++|++
T Consensus 381 ~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~-~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~ 459 (499)
T KOG0158|consen 381 YEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNKSR-HPGAYLPFGVGPRNCIGMRFALMEAKLALAH 459 (499)
T ss_pred eecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccccc-CCccccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 7778 9999999999999999999999999999999999999887644 6799999999999999999999999999874
No 11
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=1.4e-36 Score=241.67 Aligned_cols=79 Identities=22% Similarity=0.217 Sum_probs=70.2
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcccc------CCccceecccCCCccCCChHHHHHHHH
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFK------GKNFELIPFGAGWQIYPGLPLAIKMLY 176 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~------~~~~~~~pFg~G~r~C~G~~~A~~~~~ 176 (181)
++++||.|||||.|+++.|++||||++|+||++|+||||++++.... ..+.+++|||+|+|.|+|++||++|++
T Consensus 371 ~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~ 450 (490)
T PLN02500 371 VRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMA 450 (490)
T ss_pred ceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHH
Confidence 78899999999999999999999999999999999999997543211 135789999999999999999999999
Q ss_pred hhhcC
Q 042053 177 LGFSY 181 (181)
Q Consensus 177 ~~l~~ 181 (181)
++||+
T Consensus 451 ~~la~ 455 (490)
T PLN02500 451 VFIHH 455 (490)
T ss_pred HHHHH
Confidence 99873
No 12
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=2.5e-36 Score=238.10 Aligned_cols=74 Identities=31% Similarity=0.390 Sum_probs=69.0
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.||||+.|+++.+++|+|+++|+||++|+||||++++. .+..++|||+|+|.|+|++||++|+++++|
T Consensus 342 ~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la 415 (452)
T PLN03141 342 VEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLH 415 (452)
T ss_pred eeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999997532 357899999999999999999999999987
No 13
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=237.05 Aligned_cols=79 Identities=27% Similarity=0.559 Sum_probs=68.9
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcc---c-cCCccceecccCCCccCCChHHHHHHHHhh
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDID---F-KGKNFELIPFGAGWQIYPGLPLAIKMLYLG 178 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~---~-~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~ 178 (181)
++++||.||||+.|.++.+++|+||++|+||++|+||||+.+... . .....+++|||+|+|+|||++||++|++++
T Consensus 384 ~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~ 463 (514)
T PLN03112 384 TTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMA 463 (514)
T ss_pred eeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHH
Confidence 678999999999999999999999999999999999998754321 1 123468999999999999999999999999
Q ss_pred hcC
Q 042053 179 FSY 181 (181)
Q Consensus 179 l~~ 181 (181)
||+
T Consensus 464 la~ 466 (514)
T PLN03112 464 LAR 466 (514)
T ss_pred HHH
Confidence 873
No 14
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1e-35 Score=237.37 Aligned_cols=78 Identities=38% Similarity=0.742 Sum_probs=70.3
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcC-CCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESIL-DNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.|||||.|.+++|++||||++| +||++|+||||++++.+....+..++|||.|+|+|+|++||++|+++++|
T Consensus 379 ~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la 457 (502)
T PLN02966 379 TKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYA 457 (502)
T ss_pred eeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999 99999999999976543222457899999999999999999999999886
No 15
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=3.1e-35 Score=235.39 Aligned_cols=79 Identities=27% Similarity=0.400 Sum_probs=69.3
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcc----c-cCCccceecccCCCccCCChHHHHHHHHh
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDID----F-KGKNFELIPFGAGWQIYPGLPLAIKMLYL 177 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~----~-~~~~~~~~pFg~G~r~C~G~~~A~~~~~~ 177 (181)
++++||.||||+.|.++++++|+||++|+||++|+||||+++... . ......++|||.|+|+|||++||++|+++
T Consensus 395 ~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~ 474 (519)
T PLN00168 395 MEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEY 474 (519)
T ss_pred ccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 778999999999999999999999999999999999999974321 1 11346799999999999999999999999
Q ss_pred hhcC
Q 042053 178 GFSY 181 (181)
Q Consensus 178 ~l~~ 181 (181)
+||+
T Consensus 475 ~la~ 478 (519)
T PLN00168 475 FVAN 478 (519)
T ss_pred HHHH
Confidence 9873
No 16
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.9e-36 Score=237.28 Aligned_cols=79 Identities=25% Similarity=0.444 Sum_probs=69.7
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
++++||.||||+.|.++.+++|+||++|+||++|+||||++++.........++|||.|+|.|||++||++|++++||+
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 428 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAK 428 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999987633235788999999999999999999999999873
No 17
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=2.7e-35 Score=232.87 Aligned_cols=75 Identities=20% Similarity=0.308 Sum_probs=68.1
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.||||+.|+++.+++|+||++|+||++|+||||++++.. ....++|||+|+|.|||++||++|+++++|
T Consensus 354 ~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la 428 (463)
T PLN02774 354 MELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLH 428 (463)
T ss_pred eeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999965422 123699999999999999999999999986
No 18
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=3e-35 Score=235.45 Aligned_cols=75 Identities=21% Similarity=0.323 Sum_probs=67.9
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcC-CCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESIL-DNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.|||||.|+++.|++|+||++| +||++|+||||++.+. . ....++|||.|+|.|+|++||++|+++++|
T Consensus 402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~--~-~~~~~~pFG~G~R~C~G~~lA~~el~l~la 477 (516)
T PLN02290 402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF--A-PGRHFIPFAAGPRNCIGQAFAMMEAKIILA 477 (516)
T ss_pred eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC--C-CCCeEecCCCCCCCCccHHHHHHHHHHHHH
Confidence 7789999999999999999999999999 8999999999995421 1 345799999999999999999999999986
No 19
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.8e-34 Score=231.18 Aligned_cols=79 Identities=18% Similarity=0.274 Sum_probs=70.1
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcccc-----CCccceecccCCCccCCChHHHHHHHHh
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFK-----GKNFELIPFGAGWQIYPGLPLAIKMLYL 177 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~-----~~~~~~~pFg~G~r~C~G~~~A~~~~~~ 177 (181)
++++||.||||+.|.++.|++|+||++|+||++|+||||++++.+.. ..+..++|||+|+|.|+|++||++|+++
T Consensus 402 ~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~ 481 (534)
T PLN03018 402 TTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVM 481 (534)
T ss_pred eeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHH
Confidence 78899999999999999999999999999999999999997543211 1346799999999999999999999999
Q ss_pred hhcC
Q 042053 178 GFSY 181 (181)
Q Consensus 178 ~l~~ 181 (181)
++|+
T Consensus 482 ~la~ 485 (534)
T PLN03018 482 MLAR 485 (534)
T ss_pred HHHH
Confidence 9873
No 20
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=4.1e-35 Score=231.81 Aligned_cols=73 Identities=26% Similarity=0.331 Sum_probs=67.8
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.||||+.|.++.+++|+||++|+||++|+||||+++. .+..++|||+|+|.|+|++||++|+++++|
T Consensus 354 ~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la 426 (463)
T PLN02196 354 VEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIH 426 (463)
T ss_pred cccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHH
Confidence 6689999999999999999999999999999999999999632 346899999999999999999999999986
No 21
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=5.6e-34 Score=225.50 Aligned_cols=77 Identities=25% Similarity=0.300 Sum_probs=69.6
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++||.||||+.|.++.+++|+||++|+||++|+||||++.+.... ....++|||+|+|.|+|++||++|++++++
T Consensus 357 ~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~-~~~~~l~FG~G~r~C~G~~lA~~e~~~~la 433 (472)
T PLN02987 357 IEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTV-PSNVFTPFGGGPRLCPGYELARVALSVFLH 433 (472)
T ss_pred eeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCC-CCcceECCCCCCcCCCcHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999997543322 346799999999999999999999999986
No 22
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=226.46 Aligned_cols=79 Identities=24% Similarity=0.427 Sum_probs=70.8
Q ss_pred eeE-ccEEEecCcEEhhhHHhhhcCCCcCC-CCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REI-AGFIVLKCAKVLVNVWATVKYESILD-NAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~-~g~~ip~g~~v~~~~~~~~~dp~~~~-~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
+++ +||.||||+.|+++++++|||+++|+ ||++|+||||++++.....++++|+|||+|+|.|+|++||++|++++++
T Consensus 379 ~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~ 458 (497)
T KOG0157|consen 379 VKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLA 458 (497)
T ss_pred eEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHH
Confidence 777 58999999999999999999999997 9999999999976444333578999999999999999999999999986
Q ss_pred C
Q 042053 181 Y 181 (181)
Q Consensus 181 ~ 181 (181)
+
T Consensus 459 ~ 459 (497)
T KOG0157|consen 459 H 459 (497)
T ss_pred H
Confidence 3
No 23
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=3.1e-33 Score=222.57 Aligned_cols=75 Identities=25% Similarity=0.296 Sum_probs=68.8
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
++++||.||||+.|.++.+++|+||++|+||++|+||||++... .+..++|||+|+|.|+|++||.+|++++||+
T Consensus 378 ~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~----~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ 452 (490)
T PLN02302 378 VEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP----KAGTFLPFGLGSRLCPGNDLAKLEISIFLHH 452 (490)
T ss_pred EeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC----CCCCccCCCCCCcCCCcHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999996431 3567999999999999999999999999863
No 24
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.97 E-value=2.9e-32 Score=217.25 Aligned_cols=78 Identities=19% Similarity=0.307 Sum_probs=69.5
Q ss_pred eEccEEEecCcEEhhhHHhhhcCCCcC-CCCCccCCccccCCCcccc-CCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 104 EIAGFIVLKCAKVLVNVWATVKYESIL-DNAHYFTPERLLGSDIDFK-GKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 104 ~~~g~~ip~g~~v~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~-~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
.++||.||||+.|++++|++||||++| +||++|+||||++++.+.. ..+.+|+|||+|+|+|+|++||++|+++++|+
T Consensus 384 ~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ 463 (500)
T PLN02169 384 LPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALE 463 (500)
T ss_pred ccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 348999999999999999999999999 8999999999997655432 13678999999999999999999999999873
No 25
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=3e-32 Score=209.89 Aligned_cols=78 Identities=22% Similarity=0.284 Sum_probs=71.9
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhcC
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFSY 181 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~~ 181 (181)
..++||.|||||.|.+..+.+.+||++|++|++|+|||||+.+-+. .++..++|||.|+|+|+|++||.+|+.++||+
T Consensus 404 ~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~-~~pF~~LPFGfG~R~C~GRRiAElEl~llLar 481 (519)
T KOG0159|consen 404 LVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKT-IHPFASLPFGFGPRMCLGRRIAELELHLLLAR 481 (519)
T ss_pred ceeccceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCC-CCCceecCCCCCccccchHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999877432 36889999999999999999999999999873
No 26
>PLN02738 carotene beta-ring hydroxylase
Probab=99.97 E-value=1.6e-30 Score=211.32 Aligned_cols=78 Identities=22% Similarity=0.359 Sum_probs=68.8
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCc--cccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDI--DFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~--~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
.+++||.|||||.|.++.|.+|+||++|+||++|+||||+.... +.......++|||.|+|.|+|++||++|++++||
T Consensus 477 ~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA 556 (633)
T PLN02738 477 DMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATA 556 (633)
T ss_pred ceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 66899999999999999999999999999999999999985321 1122456899999999999999999999999987
No 27
>PLN02936 epsilon-ring hydroxylase
Probab=99.97 E-value=1.6e-30 Score=206.88 Aligned_cols=78 Identities=19% Similarity=0.286 Sum_probs=68.0
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcc--ccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDID--FKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
+.++||.||||+.|.++.+++|+||++|+||++|+||||+..+.. ....+..++|||.|+|.|||++||++|++++||
T Consensus 365 ~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la 444 (489)
T PLN02936 365 VLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALA 444 (489)
T ss_pred cccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 446899999999999999999999999999999999999964321 111245899999999999999999999999986
No 28
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.96 E-value=1.8e-30 Score=207.94 Aligned_cols=75 Identities=21% Similarity=0.230 Sum_probs=66.5
Q ss_pred ccEEEecCcEEhhhHHhhhcCCCcC-CCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 106 AGFIVLKCAKVLVNVWATVKYESIL-DNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 106 ~g~~ip~g~~v~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
+|+.||||+.|.++.|++|+||++| +||++|+||||++++......+..++|||+|+|+|+|++||++|+++++|
T Consensus 403 ~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la 478 (516)
T PLN03195 403 DGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALA 478 (516)
T ss_pred CCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHH
Confidence 6899999999999999999999999 99999999999964321122456799999999999999999999999986
No 29
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=2.4e-28 Score=184.90 Aligned_cols=75 Identities=24% Similarity=0.418 Sum_probs=65.9
Q ss_pred ccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCcccc--CC--ccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 106 AGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFK--GK--NFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 106 ~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~--~~--~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
+.|.||+|..|.+++..+|+||++|+||++|+|+||++++++.+ +. .+.+||||+|++.|||+.||++|++++++
T Consensus 368 ~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~ 446 (486)
T KOG0684|consen 368 GEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFIS 446 (486)
T ss_pred cceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHH
Confidence 34999999999999999999999999999999999998776542 22 24469999999999999999999998874
No 30
>PLN02648 allene oxide synthase
Probab=99.94 E-value=3.4e-27 Score=186.61 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=62.7
Q ss_pred eeEc----cEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCcccee---------cccCCCccCCChH
Q 042053 103 REIA----GFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELI---------PFGAGWQIYPGLP 169 (181)
Q Consensus 103 ~~~~----g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~---------pFg~G~r~C~G~~ 169 (181)
++++ ||.||||+.|+++.+.+|+||++|+||++|+||||++++.+. ...++ +||+|+|.|+|++
T Consensus 361 ~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~ 437 (480)
T PLN02648 361 FVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKD 437 (480)
T ss_pred EEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHH
Confidence 5564 799999999999999999999999999999999998754321 12233 3467889999999
Q ss_pred HHHHHHHhhhc
Q 042053 170 LAIKMLYLGFS 180 (181)
Q Consensus 170 ~A~~~~~~~l~ 180 (181)
||++|++++|+
T Consensus 438 ~A~~e~~~~la 448 (480)
T PLN02648 438 FVVLVARLFVA 448 (480)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 31
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.93 E-value=3e-26 Score=182.76 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=67.8
Q ss_pred eeE-ccEEEecCcEEhhhHHhhhcCCCcC-CCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REI-AGFIVLKCAKVLVNVWATVKYESIL-DNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~-~g~~ip~g~~v~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
+++ +|+.|||||.|.++.+++||||++| +||++|+||||+++.......+..++|||+|+|.|+|++||++|+++++|
T Consensus 381 ~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (502)
T PLN02426 381 DVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAV 460 (502)
T ss_pred CCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 344 8999999999999999999999999 99999999999974321112356799999999999999999999999986
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=1.4e-21 Score=152.54 Aligned_cols=68 Identities=25% Similarity=0.382 Sum_probs=65.1
Q ss_pred eeEccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCCccccCCccceecccCCCccCCChHHHHHHHHhhhc
Q 042053 103 REIAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLPLAIKMLYLGFS 180 (181)
Q Consensus 103 ~~~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~l~ 180 (181)
++++|+.||||+.|++++++.||||+.|++|++||||||. ..++|||+|+|.|+|..||++|++++|+
T Consensus 307 ~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~ 374 (411)
T COG2124 307 VELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALA 374 (411)
T ss_pred EeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999998 5589999999999999999999999875
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=79.04 E-value=1.6 Score=24.47 Aligned_cols=9 Identities=44% Similarity=0.516 Sum_probs=6.8
Q ss_pred cCCccccCC
Q 042053 136 FTPERLLGS 144 (181)
Q Consensus 136 F~PeRfl~~ 144 (181)
=||||||.-
T Consensus 43 PDPERWLP~ 51 (59)
T PF08492_consen 43 PDPERWLPK 51 (59)
T ss_pred CCccccCch
Confidence 389999853
No 34
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=69.14 E-value=4.4 Score=32.18 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=17.1
Q ss_pred eeeecCCCchHHHHHhhhhcccc
Q 042053 79 LAWMPVSRPWKSLRKICNMHIFT 101 (181)
Q Consensus 79 ~~~~~~g~~w~~~r~~~~~~l~~ 101 (181)
++..+ |+.|.++|+++.+++..
T Consensus 91 ll~~d-g~~H~r~Rkl~~~~F~~ 112 (411)
T COG2124 91 LLTLD-GPEHTRLRKLLAPAFTP 112 (411)
T ss_pred eeecC-CHHHHHHHHHhccccCH
Confidence 55555 99999999999976543
No 35
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=48.24 E-value=6.3 Score=27.28 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=24.1
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCChH
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGLP 169 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~~ 169 (181)
-+|+|++|=.---.......+.+-|..|.=.|-|.+
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence 368999985421111113467899999999999964
No 36
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion]
Probab=48.00 E-value=3.2 Score=32.02 Aligned_cols=114 Identities=12% Similarity=0.050 Sum_probs=56.7
Q ss_pred HHHHHHHHHhCCcEEEechHHHHHHHhhCCcCcCCCCchhhccccccCCcceeeecCCCch--HHHHHhhhhccccc-ee
Q 042053 28 KSLAELAKIHGPIMSLKLASMAKSILLDHDSSFCNRTVPRAMSSHQHYEFSLAWMPVSRPW--KSLRKICNMHIFTN-RE 104 (181)
Q Consensus 28 ~~~~~~~~~yG~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w--~~~r~~~~~~l~~~-~~ 104 (181)
..+.+.+.+..+.+.+.+...+.+++..+++.+.--.....-......++.+++..-|=.. +.+=|...+.+++- ++
T Consensus 147 ~~l~k~as~~pe~~ki~~nskvv~il~n~gkVsgVeymd~sgek~~~~~~~VVlatGGf~ysd~~lLKey~pel~~lpTT 226 (477)
T KOG2404|consen 147 TRLKKKASENPELVKILLNSKVVDILRNNGKVSGVEYMDASGEKSKIIGDAVVLATGGFGYSDKELLKEYGPELFGLPTT 226 (477)
T ss_pred HHHHHhhhcChHHHhhhhcceeeeeecCCCeEEEEEEEcCCCCccceecCceEEecCCcCcChHHHHHHhChhhccCCcC
Confidence 3445555555556666665556666655554432211111111111113334444422222 45556666666553 44
Q ss_pred EccEEEecCcEEhhhHHhhhcCCCcCCCCCccCCccccCCC
Q 042053 105 IAGFIVLKCAKVLVNVWATVKYESILDNAHYFTPERLLGSD 145 (181)
Q Consensus 105 ~~g~~ip~g~~v~~~~~~~~~dp~~~~~p~~F~PeRfl~~~ 145 (181)
-+.+.--.|..++..+.+..-| -|.-+-+|.+|++.+
T Consensus 227 NG~~~tGDgqk~l~klga~liD----md~vqvhptgfidpn 263 (477)
T KOG2404|consen 227 NGAQTTGDGQKMLMKLGASLID----MDQVQVHPTGFIDPN 263 (477)
T ss_pred CCCcccCcHHHHHHHhCccccc----cceeEecccCccCCC
Confidence 4445555666666666655545 345566788888765
No 37
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=44.10 E-value=7.4 Score=27.09 Aligned_cols=35 Identities=14% Similarity=0.335 Sum_probs=25.5
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCCh
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGL 168 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~ 168 (181)
-+|+||||-.---.......+.+-|..|.=.|.|.
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 48999999653333222346789999999999986
No 38
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=43.34 E-value=14 Score=26.51 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=15.1
Q ss_pred hcCCCcCCCCCccCCcc
Q 042053 124 VKYESILDNAHYFTPER 140 (181)
Q Consensus 124 ~~dp~~~~~p~~F~PeR 140 (181)
+.|+.+|.|.+.|+|-|
T Consensus 195 n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 195 NEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCcccccCccccCCCC
Confidence 77888999999999987
No 39
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=43.10 E-value=11 Score=20.56 Aligned_cols=11 Identities=27% Similarity=0.365 Sum_probs=9.1
Q ss_pred ecccCCCccCC
Q 042053 156 IPFGAGWQIYP 166 (181)
Q Consensus 156 ~pFg~G~r~C~ 166 (181)
.+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 37999999984
No 40
>TIGR02115 potass_kdpF K+-transporting ATPase, KdpF subunit. This model describes a very small integral membrane peptide KdpF, a subunit of the K(+)-translocating Kdp complex. It is found upstream of the KdpA subunit (TIGR00680). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation.
Probab=40.43 E-value=6.7 Score=17.97 Aligned_cols=6 Identities=50% Similarity=0.960 Sum_probs=3.3
Q ss_pred CCcccc
Q 042053 137 TPERLL 142 (181)
Q Consensus 137 ~PeRfl 142 (181)
+||||.
T Consensus 20 ~PErF~ 25 (26)
T TIGR02115 20 RPERFX 25 (26)
T ss_pred CHHhcC
Confidence 466653
No 41
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=40.05 E-value=25 Score=16.82 Aligned_cols=16 Identities=6% Similarity=0.231 Sum_probs=13.0
Q ss_pred CccceecccCCCccCC
Q 042053 151 KNFELIPFGAGWQIYP 166 (181)
Q Consensus 151 ~~~~~~pFg~G~r~C~ 166 (181)
...+|+|+.+-.|.|.
T Consensus 16 ~~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 16 RDNTYQPYDGPRRFCR 31 (31)
T ss_pred CCCcEeCCCCccccCc
Confidence 3577999998888884
No 42
>PRK00394 transcription factor; Reviewed
Probab=35.97 E-value=13 Score=25.96 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=25.2
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCC
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPG 167 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G 167 (181)
-+|+||||-.---.......+.+-|..|.=.|.|
T Consensus 28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence 4899999965433333234678899999999999
No 43
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=35.59 E-value=65 Score=20.53 Aligned_cols=42 Identities=24% Similarity=0.335 Sum_probs=29.6
Q ss_pred CCCCCCCCCccccccCCCCCCcHHHHHHHHHHhCCcEEEechHH
Q 042053 5 QLPPGPRPYPVIRNLLELGEKPHKSLAELAKIHGPIMSLKLASM 48 (181)
Q Consensus 5 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~ 48 (181)
++||--..+-++.|+.- .--.+.+-++..+||.|-++++|..
T Consensus 12 rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~ 53 (124)
T KOG0114|consen 12 RLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNT 53 (124)
T ss_pred CCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCc
Confidence 45555556666666652 2224567788899999999999987
No 44
>PLN00062 TATA-box-binding protein; Provisional
Probab=33.32 E-value=13 Score=26.05 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=24.9
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCCh
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGL 168 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~ 168 (181)
-+|+||+|=.---.......+.+-|..|.=.|.|.
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGa 63 (179)
T PLN00062 29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 63 (179)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEec
Confidence 58999998643222222345789999999999985
No 45
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=33.28 E-value=14 Score=25.73 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=25.3
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCCh
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGL 168 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~ 168 (181)
-+|+||||-.---.......+.+-|+.|.=.|.|.
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitGa 63 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITGA 63 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEec
Confidence 58999999653333222446789999999999984
No 46
>PF00352 TBP: Transcription factor TFIID (or TATA-binding protein, TBP); InterPro: IPR000814 The TATA-box binding protein (TBP) is required for the initiation of transcription by RNA polymerases I, II and III, from promoters with or without a TATA box [, ]. TBP associates with a host of factors, including the general transcription factors TFIIA, -B, -D, -E, and -H, to form huge multi-subunit pre-initiation complexes on the core promoter. Through its association with different transcription factors, TBP can initiate transcription from different RNA polymerases. There are several related TBPs, including TBP-like (TBPL) proteins []. The C-terminal core of TBP (~180 residues) is highly conserved and contains two 77-amino acid repeats that produce a saddle-shaped structure that straddles the DNA; this region binds to the TATA box and interacts with transcription factors and regulatory proteins []. By contrast, the N-terminal region varies in both length and sequence.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0006367 transcription initiation from RNA polymerase II promoter; PDB: 1D3U_A 1PCZ_B 1AIS_A 1NGM_A 1TBP_A 1TBA_B 1YTB_A 1RM1_A 1YTF_A 1NH2_A ....
Probab=29.53 E-value=9.6 Score=22.97 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=24.2
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCCh
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGL 168 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~ 168 (181)
-+|+||+|-.---.......+..-|..|.=.|.|.
T Consensus 31 ~~YePe~fpgl~~r~~~p~~t~~IF~sGki~itGa 65 (86)
T PF00352_consen 31 VEYEPERFPGLIYRLRNPKATVLIFSSGKIVITGA 65 (86)
T ss_dssp EEEETTTESSEEEEETTTTEEEEEETTSEEEEEEE
T ss_pred cEEeeccCCeEEEeecCCcEEEEEEcCCEEEEEec
Confidence 47899988542222222346788999999999986
No 47
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=28.21 E-value=18 Score=25.19 Aligned_cols=34 Identities=15% Similarity=0.335 Sum_probs=24.3
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCC
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPG 167 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G 167 (181)
-+|+||+|-.---.......+.+-|..|.=.|.|
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTG 62 (174)
T cd04516 29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTG 62 (174)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEe
Confidence 5899999864332222234567899999999998
No 48
>PF05953 Allatostatin: Allatostatin; InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=25.25 E-value=46 Score=11.85 Aligned_cols=6 Identities=50% Similarity=1.038 Sum_probs=3.8
Q ss_pred ecccCC
Q 042053 156 IPFGAG 161 (181)
Q Consensus 156 ~pFg~G 161 (181)
+.||.|
T Consensus 6 Y~FGLG 11 (11)
T PF05953_consen 6 YSFGLG 11 (11)
T ss_pred cccCcC
Confidence 567765
No 49
>PF15442 DUF4629: Domain of unknown function (DUF4629)
Probab=25.11 E-value=32 Score=23.25 Aligned_cols=19 Identities=5% Similarity=0.015 Sum_probs=12.3
Q ss_pred CCccCCChHHHH-HHHHhhh
Q 042053 161 GWQIYPGLPLAI-KMLYLGF 179 (181)
Q Consensus 161 G~r~C~G~~~A~-~~~~~~l 179 (181)
=||.|+|+++=. ++++..|
T Consensus 127 kPRs~LgMHMLeSVQVFH~L 146 (150)
T PF15442_consen 127 KPRSCLGMHMLESVQVFHPL 146 (150)
T ss_pred CcccccchHHHHhHHhhhhc
Confidence 389999999643 3344443
No 50
>PF14459 Prok-E2_C: Prokaryotic E2 family C
Probab=25.07 E-value=18 Score=22.98 Aligned_cols=19 Identities=26% Similarity=0.179 Sum_probs=15.7
Q ss_pred CccceecccCCCccCCChH
Q 042053 151 KNFELIPFGAGWQIYPGLP 169 (181)
Q Consensus 151 ~~~~~~pFg~G~r~C~G~~ 169 (181)
...+.+|||.|--.|+|..
T Consensus 103 ~gss~~p~GaGaAaC~aAa 121 (131)
T PF14459_consen 103 CGSSNNPFGAGAAACFAAA 121 (131)
T ss_pred cCcccCCcCccHHHHHHHH
Confidence 4567899999999999853
No 51
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=24.61 E-value=61 Score=23.19 Aligned_cols=20 Identities=15% Similarity=0.336 Sum_probs=16.4
Q ss_pred cccceeEccEEEecCcEEhh
Q 042053 99 IFTNREIAGFIVLKCAKVLV 118 (181)
Q Consensus 99 l~~~~~~~g~~ip~g~~v~~ 118 (181)
|+.++.++|..|||||.+.-
T Consensus 75 Lle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 75 LLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred EcCceEECCEEeCCCCEEEE
Confidence 45668889999999998765
No 52
>PF14510 ABC_trans_N: ABC-transporter extracellular N-terminal
Probab=24.48 E-value=26 Score=20.97 Aligned_cols=19 Identities=21% Similarity=0.191 Sum_probs=15.1
Q ss_pred cCCCcCCCCCccCCccccC
Q 042053 125 KYESILDNAHYFTPERLLG 143 (181)
Q Consensus 125 ~dp~~~~~p~~F~PeRfl~ 143 (181)
.|+..-|+.+.||.++|+.
T Consensus 23 ~d~~ldp~s~~Fdl~~~lr 41 (85)
T PF14510_consen 23 SDSSLDPDSDDFDLRRWLR 41 (85)
T ss_pred CCCCCCCCCccccHHHHHH
Confidence 4566668888899999985
No 53
>COG4282 SMI1 Protein involved in beta-1,3-glucan synthesis [Carbohydrate transport and metabolism]
Probab=23.50 E-value=45 Score=23.07 Aligned_cols=18 Identities=33% Similarity=0.713 Sum_probs=13.5
Q ss_pred CCCCCCCC----CCCCcccccc
Q 042053 2 SRKQLPPG----PRPYPVIRNL 19 (181)
Q Consensus 2 ~~~~~ppg----p~~~p~~G~~ 19 (181)
+++.+||| |.++|+++.-
T Consensus 106 s~~sfppgvywhPaWIPL~~d~ 127 (191)
T COG4282 106 SGRSFPPGVYWHPAWIPLFGDP 127 (191)
T ss_pred ccccCCCCccccCceeeecccC
Confidence 45788998 6788988743
No 54
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=20.82 E-value=37 Score=24.05 Aligned_cols=35 Identities=14% Similarity=0.312 Sum_probs=24.3
Q ss_pred CccCCccccCCCccccCCccceecccCCCccCCCh
Q 042053 134 HYFTPERLLGSDIDFKGKNFELIPFGAGWQIYPGL 168 (181)
Q Consensus 134 ~~F~PeRfl~~~~~~~~~~~~~~pFg~G~r~C~G~ 168 (181)
-+|+|+||-.--........+-.-|..|.=.|.|.
T Consensus 50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA 84 (200)
T KOG3302|consen 50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGA 84 (200)
T ss_pred cccCcccccEEEEEEcCCceEEEEecCCcEEEecc
Confidence 57899999753333332334567899999999974
Done!