BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042062
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU15|AHP4_ARATH Histidine-containing phosphotransfer protein 4 OS=Arabidopsis
thaliana GN=AHP4 PE=1 SV=2
Length = 127
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Query: 8 IAEMRQSFFDEEILDRYFIQLEQLGEN-NPGFVEDVLTVYFRDSTRTLANIEKELQKTEV 66
I + Q + DE+ F++LE+L ++ NP FVE+V +YF+DS R + NI++ L++
Sbjct: 4 IGKCMQGYLDEQ-----FMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALERGSF 58
Query: 67 NYVELDRYFYNLKGSSASIGANKVRNEVNKTRELCRAANWEEAKVSLEQLKVEHSTLKDK 126
++ LD Y + KGSS SIGA+KV+ E RE CRA N E + +QLK EHSTL+ K
Sbjct: 59 DFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKK 118
Query: 127 LTAYFE 132
L YF+
Sbjct: 119 LEHYFQ 124
>sp|Q9ZNV8|AHP2_ARATH Histidine-containing phosphotransfer protein 2 OS=Arabidopsis
thaliana GN=AHP2 PE=1 SV=1
Length = 156
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 4 LRQQIAEMRQSFFDEEILDRYFIQLEQLGEN-NPGFVEDVLTVYFRDSTRTLANIEKELQ 62
L++Q + S + + LD F +L++L ++ +P FV +VL+++F D + ++N+ + L
Sbjct: 8 LQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARALD 67
Query: 63 KT-EVNYVELDRYFYNLKGSSASIGANKVRNEVNKTRELCRAANWEEAKVSLEQLKVEHS 121
T V++ ++ + LKGSS+S+GA +V+ +E C A N+E L+Q+ +E+
Sbjct: 68 TTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYK 127
Query: 122 TLKDKLTAYFELVAQL 137
LK KL F L Q+
Sbjct: 128 ALKTKLQDMFNLEKQI 143
>sp|Q6VAK4|HP1_ORYSJ Histidine-containing phosphotransfer protein 1 OS=Oryza sativa
subsp. japonica GN=HP1 PE=1 SV=1
Length = 149
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 3 ALRQQIAEMRQSFFDEEILDRYFIQLEQLGE--NNPGFVEDVLTVYFRDSTRTLANIEKE 60
ALR Q+ + S F + ++D F QL+ L + PGFV +V+T++ D+ R + I
Sbjct: 5 ALRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATL 64
Query: 61 LQKTEVNYVELDRYFYNLKGSSASIGANKVRNEVNKTRELCRAANWEEAKVSLEQLKVEH 120
L++ VN+ ++D Y + LKGSSAS+GA KV+ + R+ C+ + + ++L ++ +
Sbjct: 65 LEQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRNDF 124
Query: 121 STLKDKLTAYFELVAQL 137
L++K +L Q+
Sbjct: 125 YDLRNKFQTMLQLEQQI 141
>sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1 OS=Arabidopsis
thaliana GN=AHP1 PE=1 SV=1
Length = 154
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 13 QSFFDEEILDRYFIQLEQL-GENNPGFVEDVLTVYFRDSTRTLANIEKELQKTEVNYVEL 71
+S F E ILD F+QL+QL E+NP FV V+T++F+DS R L ++ L + V++ ++
Sbjct: 15 KSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVVDFKKV 74
Query: 72 DRYFYNLKGSSASIGANKVRNEVNKTRELCRAANWEEAKVSLEQLKVEHSTLKDKLTAYF 131
D + + LKGSS+SIGA +V+N R C N E L+Q+K E+ +K++L F
Sbjct: 75 DPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNRLETLF 134
Query: 132 ELVAQL 137
+L Q+
Sbjct: 135 KLEQQI 140
>sp|Q9SAZ5|AHP3_ARATH Histidine-containing phosphotransfer protein 3 OS=Arabidopsis
thaliana GN=AHP3 PE=1 SV=2
Length = 155
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 4 LRQQIAEMRQSFFDEEILDRYFIQLEQL-GENNPGFVEDVLTVYFRDSTRTLANIEKELQ 62
L+++ + S + + LD F +L++L E +P FV +V+T++F D + ++N+ + L
Sbjct: 8 LQRRFCDFTISLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARALD 67
Query: 63 KT-EVNYVELDRYFYNLKGSSASIGANKVRNEVNKTRELCRAANWEEAKVSLEQLKVEHS 121
+T V++ + + LKGSS+S+GA +V+ +E C + N+E L+Q+ +E+
Sbjct: 68 QTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYK 127
Query: 122 TLKDKLTAYFELVAQL 137
TLK KL F L Q+
Sbjct: 128 TLKAKLQDLFNLEQQI 143
>sp|Q8L9T7|AHP5_ARATH Histidine-containing phosphotransfer protein 5 OS=Arabidopsis
thaliana GN=AHP5 PE=1 SV=2
Length = 157
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Query: 4 LRQQIAEMRQSFFDEEILDRYFIQLEQL-GENNPGFVEDVLTVYFRDSTRTLANIEKELQ 62
L++Q + S + + LD F +L +L E P FV +V++++F D ++ + + L+
Sbjct: 9 LQRQFQDYIVSLYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSISLE 68
Query: 63 KTE-VNYVELDRYFYNLKGSSASIGANKVRNEVNKTRELCRAANWEEAKVSLEQLKVEHS 121
+ + V++ ++D + LKGSS+S+GA +V+N +E C N E L+Q+ E+
Sbjct: 69 RPDNVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEYK 128
Query: 122 TLKDKLTAYFELVAQL 137
LK KL F L Q+
Sbjct: 129 MLKTKLQDLFNLEKQI 144
>sp|Q9SSC9|AHP6_ARATH Histidine-containing phosphotransfer protein 6 OS=Arabidopsis
thaliana GN=AHP6 PE=2 SV=2
Length = 154
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 35 NPGFVEDVLTVYFRDSTRTLANIEKELQKTEV-NYVELDRYFYNLKGSSASIGANKVRNE 93
+P FV DV+ +YF +S + L N+ L E +Y ++ + L GSS+SIGA +VRN
Sbjct: 41 SPNFVYDVINIYFDESEKLLRNLRLLLMDREFSDYKKIGLHLNQLVGSSSSIGARRVRNV 100
Query: 94 VNKTRELCRAANWEEAKVSLEQLKVEHSTLKDKLTAYFEL 133
R +N LE ++ E+ LK+ + F+L
Sbjct: 101 CVAFRSASELSNRPGCLRGLEVVEHEYHYLKNMMHELFQL 140
>sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family protein C1F5.11c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1F5.11c PE=3 SV=1
Length = 3655
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 28 LEQLGENNPGFVEDVLTVYFRDSTRTLANIEKELQKTEVNYVELDRYFYNLKGSSASIGA 87
LE +NNPG ED LTVY + L++I Y LD ++L A
Sbjct: 2502 LENSLQNNPGLSEDELTVYHKSCLDALSDI----------YYSLDE--HDLYHGLWRRRA 2549
Query: 88 NKVRNEVNKTRELCRAANWEEAKVSLEQLKVEHSTLK 124
N + EV + E C WE+A QL EH+ LK
Sbjct: 2550 NFLETEVATSHEQCH--EWEKA-----QLVYEHAQLK 2579
>sp|O94321|MPR1_SCHPO Multistep phosphorelay regulator 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mpr1 PE=1 SV=1
Length = 295
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 14 SFFDEEILDRYFIQ-------LEQLGENNPGFVEDVLTVYFRDSTRTLANIEKELQKTEV 66
SF DE I D+ I LE ++ F + ++ YF + T+A+++K L+ ++
Sbjct: 154 SFEDELIQDKQLIDHSVFDQLLEMDDDDEHEFSKSIVWNYFEQAETTIADLQKALEAKDL 213
Query: 67 NYVELDRYFYNLKGSSASIGANKVR 91
+ +F LKGSSA +G K+R
Sbjct: 214 KKLSSLGHF--LKGSSAVLGLTKMR 236
>sp|A5K168|SEY1_PLAVS Protein SEY1 homolog OS=Plasmodium vivax (strain Salvador I)
GN=PVX_085645 PE=3 SV=1
Length = 889
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 18 EEILDRYFIQLEQLGENNPGFVEDVLTVYFRDSTRTLANI 57
EE+LD FIQL+ + +NN F + VL F + T+ ++
Sbjct: 371 EELLDSLFIQLQTIVDNNLNFTQRVLAAKFANELNTMYSV 410
>sp|Q1RI78|RICKA_RICBR Arp2/3 complex-activating protein rickA OS=Rickettsia bellii
(strain RML369-C) GN=rickA PE=3 SV=1
Length = 518
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 1 MEALRQQIAEMRQ--SFFDEEILDRYFIQLEQLGENNPGFVEDVLTVYFRDSTRTLANIE 58
++ +++Q+AE+R+ F E L+ ++ +++ + NN E VL ++T+T+ NIE
Sbjct: 196 LKKIQKQVAEIREEVPFTKLEKLNNFWQKIKNIFVNN---SEQVLAKNKENNTKTIINIE 252
Query: 59 KELQKTEVNYVEL 71
++L K + EL
Sbjct: 253 EKLHKANNKFFEL 265
>sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1
SV=1
Length = 1401
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 5 RQQIAEMRQSFFDEEILDRYFIQLEQLGENNPGFVEDVLTVYFRDSTRTLANIEKELQKT 64
++++AE+R S EE+L R QLE L G VE L R L E Q+
Sbjct: 958 QRELAELRHS--QEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQR 1015
Query: 65 EVNYVELDRYFYNLKGSSASIG--ANKVRNEVNKTRELCRAANWE 107
E + SSA G +R+E+ KT C + + E
Sbjct: 1016 GGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLE 1060
>sp|B3LAJ9|SEY1_PLAKH Protein SEY1 homolog OS=Plasmodium knowlesi (strain H)
GN=PKH_133110 PE=3 SV=1
Length = 883
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 18 EEILDRYFIQLEQLGENNPGFVEDVLTVYFRDSTRTLANI 57
EE+L+ FIQL+ + +NN F + VL+ F + T+ ++
Sbjct: 373 EELLESLFIQLQTIVDNNLNFTQRVLSAKFANELNTMYSV 412
>sp|Q6DN67|L_CPSVP RNA-directed RNA polymerase L OS=Citrus psorosis virus (isolate
Spain/P-121) GN=L PE=3 SV=1
Length = 2416
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 52 RTLANIEKELQKTEVNY-VELDRYFYNLKGSSASIGA--NKVRNEVNKTREL 100
R + IEK++ + + Y +ELD F NL+GS +++G K+ +E ++ REL
Sbjct: 919 RIMIEIEKDVIRWALFYDLELDPRFINLRGSLSTLGKIYRKIVDEASELREL 970
>sp|Q07688|YPD1_YEAST Phosphorelay intermediate protein YPD1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPD1 PE=1 SV=1
Length = 167
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 43 LTVYFRDSTRT-LANIEKELQKTEVNYVELDRYFYNLKGSSASIGANKVRNEVNKTRELC 101
L + F D +T A ++++L E N ELD + LKGSSA++G ++ + + L
Sbjct: 31 LIIQFIDQAQTTFAQMQRQLDG-EKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNLG 89
Query: 102 R 102
R
Sbjct: 90 R 90
>sp|Q5P162|TIG_AROAE Trigger factor OS=Aromatoleum aromaticum (strain EbN1) GN=tig PE=3
SV=1
Length = 434
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 2 EALRQQIAEMRQSFFDE-EILDRYFIQLEQLGENNPGFVEDVLTVYFRDSTRT 53
E +R I EM QS+ D E++ Y+ Q E+LG+ +ED + + T+T
Sbjct: 367 EQVRAMIDEMAQSYEDPAELVRWYYAQPERLGQAEAVVIEDNVVAWVLSQTQT 419
>sp|Q4J8P9|SYFA_SULAC Phenylalanine--tRNA ligase alpha subunit OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=pheS PE=3 SV=1
Length = 465
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 46 YFRDSTRTLANIEKELQKTEVN--YVELDRYFYNL 78
+FRD L ++ KEL TEVN Y+E++ Y ++L
Sbjct: 215 FFRDFIEKLKDVMKELGFTEVNAGYIEMELYNFDL 249
>sp|Q6NXJ0|WWC2_MOUSE Protein WWC2 OS=Mus musculus GN=Wwc2 PE=2 SV=1
Length = 1187
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 54 LANIEKELQKTEVN-YVELDRYFYNLKGSSASIGAN-KVRNEVNKTRELCRAANWEEAKV 111
+ + E +L+ + VN ++ L R + GS SI + VR+ N ++ + +EEAK
Sbjct: 259 MGSSEPDLRSSPVNSHLSLSRQTLD-AGSQTSISGDIGVRSRSNLAEKVRLSLQYEEAKR 317
Query: 112 SLEQLKVEHSTL 123
S+ LK+E S L
Sbjct: 318 SMANLKIELSKL 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,536,276
Number of Sequences: 539616
Number of extensions: 1827057
Number of successful extensions: 6877
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 6846
Number of HSP's gapped (non-prelim): 86
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)