Query 042063
Match_columns 575
No_of_seqs 278 out of 1406
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 03:33:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dqu_A Isocitrate lyase; beta 100.0 4E-172 1E-176 1390.1 50.1 535 11-553 4-538 (538)
2 3lg3_A Isocitrate lyase; conse 100.0 5E-126 2E-130 1007.7 34.7 425 18-551 5-435 (435)
3 3i4e_A Isocitrate lyase; struc 100.0 7E-123 2E-127 985.4 35.3 422 18-553 7-434 (439)
4 3eol_A Isocitrate lyase; seatt 100.0 5E-123 2E-127 985.7 32.3 416 24-553 10-430 (433)
5 1f8m_A Isocitrate lyase, ICL; 100.0 2E-120 7E-125 966.8 35.1 415 20-552 9-429 (429)
6 3eoo_A Methylisocitrate lyase; 100.0 7.5E-50 2.6E-54 409.8 24.8 253 62-498 10-265 (298)
7 1s2w_A Phosphoenolpyruvate pho 100.0 3.2E-48 1.1E-52 397.4 22.3 255 63-500 8-266 (295)
8 1zlp_A PSR132, petal death pro 100.0 5E-48 1.7E-52 399.3 23.9 260 56-497 21-282 (318)
9 1xg4_A Probable methylisocitra 100.0 1.5E-47 5.2E-52 392.4 25.3 250 63-496 6-259 (295)
10 3ih1_A Methylisocitrate lyase; 100.0 7.1E-47 2.4E-51 388.9 23.8 253 61-498 16-269 (305)
11 3lye_A Oxaloacetate acetyl hyd 100.0 1.5E-46 5.1E-51 386.7 24.8 269 51-495 1-270 (307)
12 2hjp_A Phosphonopyruvate hydro 100.0 4.7E-46 1.6E-50 380.6 24.9 248 70-496 7-259 (290)
13 3b8i_A PA4872 oxaloacetate dec 100.0 1.5E-44 5.1E-49 369.0 24.4 242 68-494 11-253 (287)
14 3fa4_A 2,3-dimethylmalate lyas 100.0 9.7E-45 3.3E-49 372.4 22.5 177 61-272 4-181 (302)
15 2ze3_A DFA0005; organic waste 100.0 3.9E-42 1.3E-46 349.3 25.2 244 62-500 6-259 (275)
16 2qiw_A PEP phosphonomutase; st 100.0 1.5E-35 5E-40 298.2 24.5 147 67-254 9-156 (255)
17 3vav_A 3-methyl-2-oxobutanoate 99.9 1.9E-23 6.5E-28 211.9 4.5 178 70-315 21-212 (275)
18 1m3u_A 3-methyl-2-oxobutanoate 99.8 2.9E-20 1E-24 187.7 8.7 174 70-315 9-200 (264)
19 1o66_A 3-methyl-2-oxobutanoate 99.8 4E-19 1.4E-23 180.3 10.9 174 70-315 9-200 (275)
20 1oy0_A Ketopantoate hydroxymet 99.8 5.4E-19 1.8E-23 179.9 10.6 174 70-315 26-218 (281)
21 1m3u_A 3-methyl-2-oxobutanoate 90.8 1.3 4.4E-05 44.8 10.6 83 188-277 28-111 (264)
22 1o66_A 3-methyl-2-oxobutanoate 88.7 4.5 0.00015 41.1 12.7 82 188-276 28-111 (275)
23 2p10_A MLL9387 protein; putati 87.8 1.3 4.4E-05 45.3 8.0 106 64-201 14-125 (286)
24 3sgz_A Hydroxyacid oxidase 2; 86.3 1.6 5.5E-05 45.7 8.1 30 77-106 217-247 (352)
25 1wv2_A Thiazole moeity, thiazo 84.8 4.2 0.00014 41.1 9.9 109 77-239 134-244 (265)
26 1zco_A 2-dehydro-3-deoxyphosph 83.4 3.6 0.00012 41.1 8.8 162 61-236 74-257 (262)
27 3vav_A 3-methyl-2-oxobutanoate 81.3 6.7 0.00023 39.8 9.9 85 188-279 40-125 (275)
28 1vr6_A Phospho-2-dehydro-3-deo 80.2 2.3 7.7E-05 44.6 6.2 160 70-243 162-347 (350)
29 3m5v_A DHDPS, dihydrodipicolin 79.1 3.9 0.00013 41.3 7.4 111 182-319 26-142 (301)
30 2r91_A 2-keto-3-deoxy-(6-phosp 79.0 3.3 0.00011 41.5 6.8 106 182-319 17-130 (286)
31 3l21_A DHDPS, dihydrodipicolin 78.9 3.9 0.00013 41.5 7.3 110 182-319 34-149 (304)
32 3flu_A DHDPS, dihydrodipicolin 78.5 3.4 0.00012 41.7 6.7 108 182-319 26-141 (297)
33 2r8w_A AGR_C_1641P; APC7498, d 78.4 4.3 0.00015 41.7 7.6 108 182-319 53-168 (332)
34 2nli_A Lactate oxidase; flavoe 78.4 5.6 0.00019 41.5 8.5 31 77-107 229-260 (368)
35 3ffs_A Inosine-5-monophosphate 78.3 5.6 0.00019 42.2 8.6 39 66-104 172-212 (400)
36 2ehh_A DHDPS, dihydrodipicolin 78.1 4.1 0.00014 40.9 7.2 108 182-319 19-134 (294)
37 2nzl_A Hydroxyacid oxidase 1; 77.8 5.3 0.00018 42.1 8.2 42 66-107 240-283 (392)
38 4dpp_A DHDPS 2, dihydrodipicol 77.6 3.4 0.00012 43.4 6.5 108 182-319 78-191 (360)
39 1eep_A Inosine 5'-monophosphat 77.5 5.2 0.00018 41.9 8.0 41 64-104 179-222 (404)
40 1f8m_A Isocitrate lyase, ICL; 77.5 0.49 1.7E-05 50.8 0.2 58 243-314 247-308 (429)
41 3daq_A DHDPS, dihydrodipicolin 77.5 2.9 0.0001 42.0 5.9 108 182-319 21-136 (292)
42 2yxg_A DHDPS, dihydrodipicolin 77.2 4.9 0.00017 40.3 7.4 108 182-319 19-134 (289)
43 3cpr_A Dihydrodipicolinate syn 77.1 5 0.00017 40.6 7.5 108 182-319 35-150 (304)
44 1oy0_A Ketopantoate hydroxymet 77.1 12 0.00041 38.1 10.2 49 188-238 45-93 (281)
45 2ojp_A DHDPS, dihydrodipicolin 77.0 3.7 0.00013 41.3 6.4 110 182-319 20-135 (292)
46 1vs1_A 3-deoxy-7-phosphoheptul 76.5 3.3 0.00011 41.8 6.0 66 169-236 207-272 (276)
47 2wkj_A N-acetylneuraminate lya 76.3 5.1 0.00018 40.5 7.3 108 182-319 30-146 (303)
48 3eol_A Isocitrate lyase; seatt 76.3 0.51 1.7E-05 50.8 -0.1 45 257-314 263-307 (433)
49 2v9d_A YAGE; dihydrodipicolini 76.2 3.8 0.00013 42.4 6.4 108 182-319 50-165 (343)
50 3tak_A DHDPS, dihydrodipicolin 75.6 4.5 0.00015 40.6 6.6 110 182-319 20-135 (291)
51 1o5k_A DHDPS, dihydrodipicolin 75.4 3.7 0.00013 41.6 6.0 108 182-319 31-146 (306)
52 1xky_A Dihydrodipicolinate syn 75.1 5.1 0.00018 40.5 6.9 108 182-319 31-146 (301)
53 1w3i_A EDA, 2-keto-3-deoxy glu 74.5 4.2 0.00014 40.9 6.1 107 182-319 18-131 (293)
54 2nuw_A 2-keto-3-deoxygluconate 74.4 3.7 0.00013 41.2 5.7 106 182-319 18-131 (288)
55 3d0c_A Dihydrodipicolinate syn 74.3 3.9 0.00013 41.7 5.8 108 182-318 31-144 (314)
56 3qfe_A Putative dihydrodipicol 74.2 3.2 0.00011 42.4 5.2 118 174-319 22-147 (318)
57 3b4u_A Dihydrodipicolinate syn 73.8 5 0.00017 40.4 6.5 109 182-319 22-141 (294)
58 3fkr_A L-2-keto-3-deoxyarabona 73.3 3.6 0.00012 41.8 5.3 110 182-318 27-144 (309)
59 1f6k_A N-acetylneuraminate lya 73.3 5.5 0.00019 40.0 6.6 108 182-319 22-138 (293)
60 3na8_A Putative dihydrodipicol 73.3 3.7 0.00013 41.9 5.4 110 182-319 43-158 (315)
61 3s5o_A 4-hydroxy-2-oxoglutarat 72.8 3.9 0.00013 41.5 5.4 110 182-319 33-150 (307)
62 3lg3_A Isocitrate lyase; conse 72.5 0.93 3.2E-05 48.8 0.7 60 243-315 251-313 (435)
63 3e96_A Dihydrodipicolinate syn 72.4 4.1 0.00014 41.5 5.5 108 182-318 31-144 (316)
64 3qze_A DHDPS, dihydrodipicolin 72.2 4.7 0.00016 41.1 5.8 110 182-319 42-157 (314)
65 3si9_A DHDPS, dihydrodipicolin 72.0 5 0.00017 41.0 6.0 108 182-319 41-156 (315)
66 1ypf_A GMP reductase; GUAC, pu 72.0 29 0.001 35.3 11.8 27 79-105 150-178 (336)
67 3i4e_A Isocitrate lyase; struc 71.7 0.93 3.2E-05 48.9 0.5 60 243-315 251-313 (439)
68 3hgj_A Chromate reductase; TIM 71.7 28 0.00095 35.7 11.6 57 419-476 206-263 (349)
69 1o60_A 2-dehydro-3-deoxyphosph 70.8 2.6 8.7E-05 43.0 3.5 152 77-242 88-275 (292)
70 2rfg_A Dihydrodipicolinate syn 70.0 5.1 0.00018 40.4 5.5 108 182-319 19-134 (297)
71 2vc6_A MOSA, dihydrodipicolina 69.4 4.9 0.00017 40.3 5.2 108 182-319 19-134 (292)
72 3h5d_A DHDPS, dihydrodipicolin 68.5 6.9 0.00024 39.8 6.1 108 182-319 26-142 (311)
73 1y0e_A Putative N-acetylmannos 67.7 34 0.0012 32.0 10.4 96 65-204 108-204 (223)
74 2nwr_A 2-dehydro-3-deoxyphosph 67.2 6.7 0.00023 39.5 5.6 144 78-236 75-252 (267)
75 3eb2_A Putative dihydrodipicol 66.6 3.6 0.00012 41.6 3.6 109 182-318 23-137 (300)
76 1xm3_A Thiazole biosynthesis p 66.5 28 0.00094 34.4 9.9 56 170-238 179-234 (264)
77 3nvt_A 3-deoxy-D-arabino-heptu 66.4 6.9 0.00023 41.4 5.8 146 77-236 205-376 (385)
78 3sz8_A 2-dehydro-3-deoxyphosph 66.4 8.9 0.0003 39.0 6.4 157 78-242 91-277 (285)
79 3a5f_A Dihydrodipicolinate syn 65.7 4.7 0.00016 40.5 4.2 110 179-319 18-135 (291)
80 1vcf_A Isopentenyl-diphosphate 64.8 30 0.001 35.0 10.0 41 66-106 170-214 (332)
81 3dz1_A Dihydrodipicolinate syn 63.8 9.3 0.00032 38.8 6.0 111 182-319 27-142 (313)
82 1jcn_A Inosine monophosphate d 62.9 18 0.00062 38.9 8.4 103 68-207 285-390 (514)
83 1kbi_A Cytochrome B2, L-LCR; f 62.7 15 0.0005 40.1 7.7 30 77-106 343-373 (511)
84 2qkf_A 3-deoxy-D-manno-octulos 61.9 2.9 0.0001 42.2 1.8 65 170-236 191-266 (280)
85 1p4c_A L(+)-mandelate dehydrog 60.3 26 0.00087 36.6 8.7 30 77-106 225-255 (380)
86 3bjs_A Mandelate racemase/muco 60.1 35 0.0012 36.0 9.8 75 170-264 172-247 (428)
87 3gr7_A NADPH dehydrogenase; fl 59.1 56 0.0019 33.4 10.9 51 419-471 198-248 (340)
88 3khj_A Inosine-5-monophosphate 58.5 11 0.00037 39.3 5.5 28 77-104 145-173 (361)
89 3tml_A 2-dehydro-3-deoxyphosph 58.3 5.8 0.0002 40.5 3.3 155 77-237 87-276 (288)
90 1q7z_A 5-methyltetrahydrofolat 57.7 9.3 0.00032 42.2 5.1 33 400-433 137-169 (566)
91 4fo4_A Inosine 5'-monophosphat 56.6 12 0.00041 39.2 5.4 27 77-103 149-176 (366)
92 2rdx_A Mandelate racemase/muco 56.4 32 0.0011 35.3 8.6 77 170-269 135-211 (379)
93 2p8b_A Mandelate racemase/muco 56.1 37 0.0013 34.6 9.0 70 179-269 138-208 (369)
94 2zad_A Muconate cycloisomerase 55.6 40 0.0014 34.1 9.1 65 179-264 136-200 (345)
95 3i4p_A Transcriptional regulat 54.9 19 0.00065 32.6 5.9 73 403-477 64-139 (162)
96 3q58_A N-acetylmannosamine-6-p 54.6 72 0.0025 30.8 10.3 81 78-204 129-210 (229)
97 2hmc_A AGR_L_411P, dihydrodipi 54.4 10 0.00035 39.2 4.4 106 182-319 45-159 (344)
98 1qop_A Tryptophan synthase alp 53.1 14 0.00049 36.4 5.1 35 170-207 95-132 (268)
99 1mdl_A Mandelate racemase; iso 52.7 48 0.0017 33.6 9.2 74 170-264 134-207 (359)
100 2c6q_A GMP reductase 2; TIM ba 51.9 16 0.00054 37.8 5.4 40 65-104 147-189 (351)
101 1vrd_A Inosine-5'-monophosphat 51.4 16 0.00056 39.0 5.6 29 77-105 278-307 (494)
102 3usb_A Inosine-5'-monophosphat 50.6 21 0.0007 38.8 6.3 27 77-103 297-324 (511)
103 3fs2_A 2-dehydro-3-deoxyphosph 50.5 12 0.00041 38.3 4.1 150 77-236 111-293 (298)
104 3bw2_A 2-nitropropane dioxygen 50.4 47 0.0016 34.1 8.7 91 79-206 146-239 (369)
105 1gox_A (S)-2-hydroxy-acid oxid 50.3 43 0.0015 34.6 8.4 31 77-107 225-256 (370)
106 3bo9_A Putative nitroalkan dio 50.3 44 0.0015 33.9 8.3 84 78-207 124-208 (326)
107 3vkj_A Isopentenyl-diphosphate 49.2 82 0.0028 32.8 10.3 35 166-206 186-220 (368)
108 1me8_A Inosine-5'-monophosphat 48.6 32 0.0011 37.1 7.4 26 78-103 285-311 (503)
109 2htm_A Thiazole biosynthesis p 48.2 92 0.0031 31.5 10.1 57 170-239 179-235 (268)
110 4avf_A Inosine-5'-monophosphat 48.1 35 0.0012 36.8 7.5 28 77-104 270-298 (490)
111 3igs_A N-acetylmannosamine-6-p 47.9 1.2E+02 0.004 29.3 10.6 81 78-204 129-210 (232)
112 2gzm_A Glutamate racemase; enz 47.0 26 0.00091 34.4 5.9 69 173-251 6-74 (267)
113 2qde_A Mandelate racemase/muco 46.0 48 0.0016 34.3 8.0 77 170-269 135-211 (397)
114 1p0k_A Isopentenyl-diphosphate 45.2 40 0.0014 34.2 7.1 77 30-106 116-211 (349)
115 2ekc_A AQ_1548, tryptophan syn 44.9 31 0.001 33.9 6.0 34 170-206 95-131 (262)
116 2ps2_A Putative mandelate race 44.9 49 0.0017 33.8 7.8 78 170-270 136-213 (371)
117 1yxy_A Putative N-acetylmannos 44.7 86 0.0029 29.5 9.0 91 65-204 122-215 (234)
118 1b73_A Glutamate racemase; iso 44.3 29 0.001 33.7 5.7 67 176-252 6-72 (254)
119 1tkk_A Similar to chloromucona 44.0 80 0.0027 32.1 9.2 67 179-264 137-203 (366)
120 1lt8_A Betaine-homocysteine me 43.7 24 0.00083 37.4 5.4 60 400-465 150-209 (406)
121 2gjl_A Hypothetical protein PA 43.3 85 0.0029 31.4 9.1 83 79-205 119-202 (328)
122 4fxs_A Inosine-5'-monophosphat 43.2 36 0.0012 36.8 6.7 29 77-105 272-301 (496)
123 3sjn_A Mandelate racemase/muco 42.7 63 0.0021 33.2 8.2 79 170-270 135-217 (374)
124 3nav_A Tryptophan synthase alp 41.3 42 0.0014 33.6 6.4 31 166-204 207-237 (271)
125 3sr7_A Isopentenyl-diphosphate 41.2 28 0.00097 36.3 5.3 31 170-204 207-237 (365)
126 2cvi_A 75AA long hypothetical 40.9 54 0.0019 26.0 5.9 63 405-471 5-70 (83)
127 2qdd_A Mandelate racemase/muco 40.6 69 0.0023 32.8 8.1 74 170-264 135-208 (378)
128 2qr6_A IMP dehydrogenase/GMP r 40.4 21 0.00072 37.0 4.2 29 77-105 211-240 (393)
129 3sr7_A Isopentenyl-diphosphate 40.3 46 0.0016 34.7 6.8 30 77-106 206-239 (365)
130 2y7e_A 3-keto-5-aminohexanoate 40.1 43 0.0015 33.9 6.3 110 376-496 55-168 (282)
131 2jfz_A Glutamate racemase; cel 39.8 40 0.0014 32.8 5.9 68 176-253 6-73 (255)
132 1zfj_A Inosine monophosphate d 39.7 84 0.0029 33.3 8.8 28 77-104 274-302 (491)
133 3r2g_A Inosine 5'-monophosphat 39.7 59 0.002 34.0 7.4 40 65-104 127-169 (361)
134 1rd5_A Tryptophan synthase alp 39.3 52 0.0018 31.9 6.6 82 169-260 20-112 (262)
135 3vkj_A Isopentenyl-diphosphate 38.7 67 0.0023 33.4 7.7 41 66-106 175-220 (368)
136 3rmj_A 2-isopropylmalate synth 38.5 63 0.0021 33.7 7.4 58 169-238 141-199 (370)
137 1zuw_A Glutamate racemase 1; ( 38.0 37 0.0013 33.5 5.4 67 175-251 8-75 (272)
138 3ff5_A PEX14P, peroxisomal bio 37.6 80 0.0027 24.5 6.0 38 266-306 15-52 (54)
139 2cu0_A Inosine-5'-monophosphat 36.9 39 0.0013 36.1 5.7 32 170-207 329-360 (486)
140 1nu5_A Chloromuconate cycloiso 36.6 1E+02 0.0035 31.3 8.6 67 179-264 139-206 (370)
141 1vhn_A Putative flavin oxidore 35.2 46 0.0016 33.4 5.7 37 166-205 125-161 (318)
142 2w84_A Peroxisomal membrane pr 35.2 85 0.0029 25.7 6.0 39 266-307 20-58 (70)
143 2ovl_A Putative racemase; stru 35.1 1.2E+02 0.0041 30.9 8.9 78 170-269 134-213 (371)
144 3ozy_A Putative mandelate race 35.1 1.3E+02 0.0045 31.0 9.3 74 170-264 139-213 (389)
145 4djd_D C/Fe-SP, corrinoid/iron 34.7 44 0.0015 34.5 5.4 70 91-200 86-157 (323)
146 4e5t_A Mandelate racemase / mu 34.0 1.4E+02 0.0047 31.1 9.3 84 178-270 147-231 (404)
147 2fiq_A Putative tagatose 6-pho 33.5 83 0.0028 33.7 7.4 102 67-206 2-126 (420)
148 1ep3_A Dihydroorotate dehydrog 33.2 1.2E+02 0.0043 29.5 8.3 107 64-203 150-269 (311)
149 3ewb_X 2-isopropylmalate synth 32.7 77 0.0026 31.8 6.8 57 170-238 135-192 (293)
150 2dwu_A Glutamate racemase; iso 31.6 37 0.0013 33.6 4.2 71 170-251 8-78 (276)
151 1ka9_F Imidazole glycerol phos 31.3 71 0.0024 30.3 6.0 34 166-207 74-107 (252)
152 2og9_A Mandelate racemase/muco 30.8 1.2E+02 0.0043 31.1 8.2 68 182-269 162-229 (393)
153 1rvk_A Isomerase/lactonizing e 30.6 2E+02 0.007 29.1 9.7 71 181-264 148-218 (382)
154 1vzw_A Phosphoribosyl isomeras 29.8 1.3E+02 0.0045 28.3 7.6 28 170-203 76-103 (244)
155 1xi3_A Thiamine phosphate pyro 29.2 85 0.0029 28.7 6.0 23 185-207 27-49 (215)
156 3ivs_A Homocitrate synthase, m 29.0 87 0.003 33.4 6.7 38 170-207 165-203 (423)
157 1h5y_A HISF; histidine biosynt 28.9 1.1E+02 0.0036 28.5 6.7 32 170-207 78-109 (253)
158 2rp4_A Transcription factor P5 28.9 12 0.00043 30.8 0.1 18 369-386 8-25 (76)
159 1z41_A YQJM, probable NADH-dep 28.3 1.4E+02 0.0049 30.1 8.0 89 91-203 150-248 (338)
160 2hxt_A L-fuconate dehydratase; 28.1 1.5E+02 0.0052 31.0 8.4 67 182-269 198-264 (441)
161 2gdq_A YITF; mandelate racemas 28.0 1.5E+02 0.0052 30.3 8.3 74 170-264 124-202 (382)
162 1thf_D HISF protein; thermophI 27.8 97 0.0033 29.3 6.3 32 170-207 75-106 (253)
163 1of8_A Phospho-2-dehydro-3-deo 27.7 39 0.0013 35.6 3.7 37 170-206 274-318 (370)
164 3flu_A DHDPS, dihydrodipicolin 27.6 1.3E+02 0.0045 30.0 7.5 63 170-248 77-139 (297)
165 2jfn_A Glutamate racemase; cel 27.6 82 0.0028 31.2 5.9 70 173-252 24-94 (285)
166 2zbc_A 83AA long hypothetical 27.2 1.2E+02 0.004 23.6 5.7 61 405-469 5-68 (83)
167 2y88_A Phosphoribosyl isomeras 27.1 1.3E+02 0.0046 28.1 7.1 28 170-203 75-102 (244)
168 2w6r_A Imidazole glycerol phos 27.0 1.3E+02 0.0044 28.7 7.1 32 170-207 75-106 (266)
169 3eez_A Putative mandelate race 27.0 1.8E+02 0.0061 29.9 8.6 78 170-270 135-212 (378)
170 2cw6_A Hydroxymethylglutaryl-C 26.8 99 0.0034 30.8 6.4 45 182-238 154-198 (298)
171 3o07_A Pyridoxine biosynthesis 26.7 26 0.0009 35.8 2.1 165 33-237 47-251 (291)
172 3vnd_A TSA, tryptophan synthas 26.7 30 0.001 34.5 2.6 35 170-207 96-133 (267)
173 1xi3_A Thiamine phosphate pyro 26.6 1.7E+02 0.006 26.6 7.7 84 78-206 108-192 (215)
174 3daq_A DHDPS, dihydrodipicolin 26.1 86 0.0029 31.2 5.8 63 170-248 72-134 (292)
175 3f4w_A Putative hexulose 6 pho 26.1 2.6E+02 0.0087 25.6 8.7 93 64-203 90-186 (211)
176 1f76_A Dihydroorotate dehydrog 26.0 1.4E+02 0.0047 30.0 7.3 36 170-206 212-247 (336)
177 2pp0_A L-talarate/galactarate 26.0 2E+02 0.0068 29.7 8.7 68 182-269 175-242 (398)
178 3l21_A DHDPS, dihydrodipicolin 25.8 1.4E+02 0.0047 30.0 7.3 63 170-248 85-147 (304)
179 3toy_A Mandelate racemase/muco 25.8 2.9E+02 0.0099 28.4 9.9 79 170-270 157-236 (383)
180 2z6i_A Trans-2-enoyl-ACP reduc 25.7 1.3E+02 0.0044 30.3 7.1 81 79-205 111-192 (332)
181 3eeg_A 2-isopropylmalate synth 25.6 81 0.0028 32.1 5.6 57 170-238 136-193 (325)
182 4adt_A Pyridoxine biosynthetic 25.1 70 0.0024 32.5 4.9 52 170-236 208-259 (297)
183 4e4u_A Mandalate racemase/muco 24.9 2.7E+02 0.0091 29.0 9.5 82 180-270 142-224 (412)
184 2oz8_A MLL7089 protein; struct 24.5 2.3E+02 0.0077 29.1 8.8 74 170-264 133-208 (389)
185 3si9_A DHDPS, dihydrodipicolin 24.2 1.5E+02 0.0052 29.9 7.2 63 170-248 92-154 (315)
186 2qiw_A PEP phosphonomutase; st 24.2 28 0.00096 34.6 1.8 62 120-205 119-189 (255)
187 3m5v_A DHDPS, dihydrodipicolin 24.1 1.4E+02 0.0048 29.8 6.9 63 170-248 78-140 (301)
188 3tak_A DHDPS, dihydrodipicolin 24.0 1.6E+02 0.0056 29.1 7.4 63 170-248 71-133 (291)
189 3qze_A DHDPS, dihydrodipicolin 23.8 1.3E+02 0.0043 30.4 6.6 63 170-248 93-155 (314)
190 1wa3_A 2-keto-3-deoxy-6-phosph 23.7 1.7E+02 0.0058 26.7 7.0 29 170-205 151-179 (205)
191 3ist_A Glutamate racemase; str 23.5 92 0.0031 30.9 5.4 70 170-250 6-75 (269)
192 2dsk_A Chitinase; catalytic do 23.5 37 0.0013 34.8 2.5 83 398-491 11-104 (311)
193 2pgw_A Muconate cycloisomerase 23.2 2.2E+02 0.0074 29.1 8.3 66 181-268 146-211 (384)
194 3na8_A Putative dihydrodipicol 22.9 1.2E+02 0.0043 30.5 6.3 64 170-249 94-157 (315)
195 3nav_A Tryptophan synthase alp 22.4 41 0.0014 33.7 2.6 35 170-207 98-135 (271)
196 1yad_A Regulatory protein TENI 22.4 1.9E+02 0.0063 26.9 7.0 85 78-207 110-195 (221)
197 2wkj_A N-acetylneuraminate lya 22.0 1.8E+02 0.0062 29.1 7.3 64 170-248 81-144 (303)
198 3igs_A N-acetylmannosamine-6-p 21.6 1.3E+02 0.0045 28.9 6.0 22 183-204 35-56 (232)
199 3qja_A IGPS, indole-3-glycerol 21.5 3E+02 0.01 27.2 8.6 93 62-205 150-243 (272)
200 2vvt_A Glutamate racemase; iso 21.5 1.2E+02 0.0041 30.2 5.8 71 173-253 27-97 (290)
201 3no5_A Uncharacterized protein 21.4 1.3E+02 0.0043 30.3 5.9 77 410-495 57-162 (275)
202 2qgy_A Enolase from the enviro 21.2 3.3E+02 0.011 27.9 9.3 80 170-269 136-216 (391)
203 1t4y_A Adaptive-response senso 21.2 18 0.00062 31.8 -0.3 14 21-36 86-99 (105)
204 3stp_A Galactonate dehydratase 21.1 2.8E+02 0.0095 29.0 8.7 86 170-270 168-253 (412)
205 2cyy_A Putative HTH-type trans 21.0 1.5E+02 0.0051 25.9 5.8 60 403-466 68-130 (151)
206 1rd5_A Tryptophan synthase alp 20.7 73 0.0025 30.8 3.9 29 170-204 202-230 (262)
207 2wje_A CPS4B, tyrosine-protein 20.6 2.2E+02 0.0076 27.0 7.3 69 172-248 12-80 (247)
208 4dpp_A DHDPS 2, dihydrodipicol 20.5 2E+02 0.0067 30.0 7.3 33 170-204 129-161 (360)
209 3l5l_A Xenobiotic reductase A; 20.4 86 0.0029 32.3 4.6 54 419-473 212-267 (363)
210 3q58_A N-acetylmannosamine-6-p 20.3 1.4E+02 0.0049 28.7 5.9 33 172-204 20-56 (229)
211 2ehh_A DHDPS, dihydrodipicolin 20.3 1.8E+02 0.0062 28.8 6.8 63 170-248 70-132 (294)
212 2r8w_A AGR_C_1641P; APC7498, d 20.2 1.7E+02 0.0059 29.7 6.7 62 170-247 104-165 (332)
213 3s5o_A 4-hydroxy-2-oxoglutarat 20.1 3.4E+02 0.012 27.1 8.8 66 169-248 83-148 (307)
214 3b4u_A Dihydrodipicolinate syn 20.1 2.3E+02 0.0078 28.1 7.5 34 169-204 72-105 (294)
215 3h5d_A DHDPS, dihydrodipicolin 20.1 1.7E+02 0.0057 29.5 6.6 64 169-248 76-140 (311)
216 2jfq_A Glutamate racemase; cel 20.0 1.4E+02 0.0049 29.5 6.0 67 176-252 28-94 (286)
No 1
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=100.00 E-value=3.8e-172 Score=1390.05 Aligned_cols=535 Identities=57% Similarity=0.950 Sum_probs=495.1
Q ss_pred hhHHhhhHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHhhCCccccCCchHHHHHHHHHHHhhhhCCCceeecCCCCHHH
Q 042063 11 ILEEEGRFEAEVAEVQAWWNSERFRLTRRPYSARDVVALRGSLRQSYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQ 90 (575)
Q Consensus 11 ~~~~~~~~~~~~~~i~~ww~~~R~~~i~R~Yta~~v~~~rgs~~~~y~~~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~s 90 (575)
++.|+..|+++|++|++||++|||++|+||||++||+++|||+|++||++.+|+|||++|+++|++++|+++||||||+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~w~~~R~~~i~rpYta~~v~~~rGs~~~~~~~~~~a~kL~~~lr~l~~~~~~l~~pga~D~~s 83 (538)
T 1dqu_A 4 IEEEDQRYWDEVAAVKNWWKDSRWRYTKRPFTAEQIVAKRGNLKIEYPSNVQAKKLWGILERNFKNKEASFTYGCLDPTM 83 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSGGGGGCCCSSCHHHHHHHCCSSCCCCTHHHHHHHHHHHHHHHHHHTCCEEEEBCCSHHH
T ss_pred hhHHHHHHHHHHHHHHHHhcCccccCccCCCCHHHHHHHcCCCCCccchhHHHHHHHHHHHHhhccCCcEEecCCCCHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCC
Q 042063 91 VTMMAKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLK 170 (575)
Q Consensus 91 A~~~a~gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~l 170 (575)
|+++++||++||+|||+||++++++++|+||+++||+++|++.|++|+++|++|||||+++|++++++++++.+.+||++
T Consensus 84 A~~~~~gf~Aiy~SG~~vAas~~~~~~G~PD~~~~~~~ev~~~v~~I~~a~~~~D~~q~~~r~~~~~~~~~~~~~~d~~l 163 (538)
T 1dqu_A 84 VTQMAKYLDTVYVSGWQSSSTASSTDEPSPDLADYPMNTVPNKVNHLWMAQLFHDRKQREERMTTPKDQRHKVANVDYLR 163 (538)
T ss_dssp HHHHHHHCSCEEECHHHHHHHCCTTCCCCSSCSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHTTSCCCCCCC
T ss_pred HHHHHhcCCeeecccHHHHhhcccccCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhhhccccccCcCC
Confidence 99988899999999999998877778999999999999999999999999999999999999999999988887789999
Q ss_pred ceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEe
Q 042063 171 PIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVAR 250 (575)
Q Consensus 171 PIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiAR 250 (575)
|||||+|+|||+++||+++||.|+++||+|||||||+.+||||||++||+|||++||++||+|||.++|.+|+|||||||
T Consensus 164 PIiaD~DtGfG~~~nv~~tvk~~ieAGaAGihIEDQ~~~~KkCGH~~GK~Lvp~ee~v~rI~AAr~A~d~~g~d~vIiAR 243 (538)
T 1dqu_A 164 PIIADADTGHGGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGTDLLAIAR 243 (538)
T ss_dssp CEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEECSBCTTCC------CEEECCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ceEEecCCcCCchHHHHHHHHHHHHcCCeEEEeeccCCCCCCcCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99999999999999999999999999999999999997799999999999999999999999999999999999999999
Q ss_pred ecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCC
Q 042063 251 TDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNT 330 (575)
Q Consensus 251 TDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~ 330 (575)
||++.+.+|+++|++|+++|+.|+|||.+. ||||++..+.++|++++||.+|+++|..++||++|||++.++|.++
T Consensus 244 TDA~~~~~l~~aI~~R~~ay~~G~~~~~~~--AGAD~~~~~~~~G~~~~ei~~~~~~~~~~~nl~~~~e~~~~~l~~~-- 319 (538)
T 1dqu_A 244 TDSEAATLITSTIDHRDHPFIIGSTNPDIQ--PLNDLMVMAEQAGKNGAELQAIEDEWLAKAGLKLFNDAVVDAINNS-- 319 (538)
T ss_dssp CCGGGEEEESCTTCGGGGGGEEEECCTTSC--CHHHHHHHHHHSCCCSHHHHHHHHHHHHHSCEECSHHHHHHHHHTS--
T ss_pred eccccccCHHHHHHHHHHHHHhcCCCCCCc--cchHHHHHHHhcCCCHHHHHHHHHHhcCCCceEecchHHHHHHHhc--
Confidence 999999999999999999999999999887 9999977666789999999999999999999999999999999774
Q ss_pred CchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeecc
Q 042063 331 GEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMET 410 (575)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et 410 (575)
+.+++++.+..|.+.+. +.|+.+||++|++++|.+++||||.|||+|||||||||+++||+|+++|+||||||||||
T Consensus 320 ~~g~~~~~~~~y~~~~~---r~s~~~~r~~A~~i~g~~v~~dwd~~rt~eG~y~~~~g~~~ai~r~~a~ap~aDliW~Et 396 (538)
T 1dqu_A 320 PLPNKKAAIEKYLTQSK---GKSNLEARAIAKEIAGTDIYFDWEAPRTREGYYRYQGGTQCAINRAVAYAPFADLIWMES 396 (538)
T ss_dssp SCSCHHHHHHHHHHHHT---TCCHHHHHHHHHHHHSSCCCCBTTSSCCTTCCEEECCSHHHHHHHHHHHTTSCSEEECCC
T ss_pred ccCccHHHHHHHHHHhc---cccHHHHHHHHHHHcCCCceecCCCCCCccceeEecCchHHHHHHhcccCcccceEEecc
Confidence 45567778899999875 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHH
Q 042063 411 ASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDY 490 (575)
Q Consensus 411 ~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~ 490 (575)
++||++||++||++||++||++||+|||||||||+++ |||++|++|||||+|||||||||||||||++|++|++|||+|
T Consensus 397 ~~P~~~~a~~fa~~i~~~~P~~~LaYN~SPSFnW~~~-~~d~~~~~f~~~l~~~G~~~qfItLag~H~~~~~~~~la~~~ 475 (538)
T 1dqu_A 397 KLPDYKQAKEFADGVHAVWPEQKLAYNLSPSFNWKKA-MPRDEQETYIKRLGALGYAWQFITLAGLHTTALISDTFAKAY 475 (538)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTCEEEEECCSSSCGGGT-SCHHHHHSHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCceEEecCCcchhhhhh-CCHHHHHHHHHHHHhcCceEEEEehhhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHhcCCCccccccccCchhHHHHHHHhcCCcchhhcCCCCchhhhhhh
Q 042063 491 ARRGMLAYVERIQREERNNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQFKE 553 (575)
Q Consensus 491 ~~~GM~aYv~~vQ~~E~~~g~d~~~HQkwsGa~y~D~~~~~v~~g~sst~a~g~~~te~qf~~ 553 (575)
+++||+|||++|||+|++.|||+++||||||++|+|.++++|+||+|||+|||+|+||+||++
T Consensus 476 ~~~gm~aYv~~vQ~~E~~~g~~~~~HQ~~~G~~y~D~~~~~~~~g~sst~a~~~~~te~qf~~ 538 (538)
T 1dqu_A 476 AKQGMRAYGELVQEPEMANGVDVVTHQKWSGANYVDNMLKMITGGVSSTAAMGKGVTEDQFKS 538 (538)
T ss_dssp HHHTHHHHHHHTHHHHHHHTCGGGSHHHHHTHHHHHHHHHHHHCC------------------
T ss_pred HHhCHHHHHHHHHHHHHhcCCCeeeccccccccHHHHHHHHhcCcchhhhhccCCCchhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999974
No 2
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=100.00 E-value=4.6e-126 Score=1007.70 Aligned_cols=425 Identities=42% Similarity=0.700 Sum_probs=389.4
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCHHHHHHhhCCccccCCc-hHHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc
Q 042063 18 FEAEVAEVQAWWNSERFRLTRRPYSARDVVALRGSLRQSYGS-NEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK 96 (575)
Q Consensus 18 ~~~~~~~i~~ww~~~R~~~i~R~Yta~~v~~~rgs~~~~y~~-~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~ 96 (575)
.+++|++|++||.+|||++|+|||||+||++||||++++||+ +.+|++||++|++.. +++++++||||||+||+++++
T Consensus 5 ~~~~~~~~~~~w~~~r~~~~~r~yta~~v~~~rgs~~~~~~~a~~~a~~Lr~ll~~~~-~~~~~~~~Ga~d~~sA~~~~~ 83 (435)
T 3lg3_A 5 RTQQIQQLEQEWTSPRWKNITRPYSAEDVIKLRGSVNPECTFAQNGAKKLWELLHGGS-RKGYINCLGALTGGQALQQAK 83 (435)
T ss_dssp HHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTS-SSSSEEEEBCCSHHHHHHHHH
T ss_pred hHHHHHHHHHhhcChhhcCCCCCCCHHHHHHhCCCCCCcCchHHHHHHHHHHHHHhhc-cCCcEEeCCCCcHHHHHHHHH
Confidence 468999999999999999999999999999999999999997 589999999997644 478999999999999999988
Q ss_pred -cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeee
Q 042063 97 -HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIAD 175 (575)
Q Consensus 97 -gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD 175 (575)
||++||+|||+||++++++++|+||+++||+++|++.|++|++++++|||+|+.++. .+...+.+||++|||||
T Consensus 84 aGf~Aiy~SG~~vAa~~~~s~~G~PD~gl~~~~ev~~~v~rI~~a~~~~d~~~~~~~~-----~~~~~~~~d~~lPviaD 158 (435)
T 3lg3_A 84 AGVEAIYMSGWQVAADANTASSMYPDQSLYPVDSVPAVVKRINNSFRRADQIQWSNNI-----EPGSKGYTDYFLPIVAD 158 (435)
T ss_dssp HTCCSEEECHHHHHHHCCTTCSCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTC-----CTTSTTCCCCCCCEEEE
T ss_pred cCCCEEEechHHHhcccchhccCCCCcCcCcHHHHHHHHHHHHHHHHhhhhhhhhccc-----cccccccccCCCCeEEE
Confidence 899999999999987666789999999999999999999999999999999987542 22334678999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccc
Q 042063 176 GDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEA 255 (575)
Q Consensus 176 ~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~ 255 (575)
+|+|||+++||+++||.|+++||+|||||||+.+||||||++||+|+|++||++||+|||.++|.+|+|||||||||++.
T Consensus 159 ~DtGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~a 238 (435)
T 3lg3_A 159 AEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADA 238 (435)
T ss_dssp CTTCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTT
T ss_pred CCCCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcc
Confidence 99999999999999999999999999999999669999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhh
Q 042063 256 ATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEK 335 (575)
Q Consensus 256 a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~ 335 (575)
+.+|+++||+|||.|+.|
T Consensus 239 a~l~~s~~d~rD~~fi~G-------------------------------------------------------------- 256 (435)
T 3lg3_A 239 ADLLTSDCDPYDREFITG-------------------------------------------------------------- 256 (435)
T ss_dssp CCEESCCCCGGGGGGEEE--------------------------------------------------------------
T ss_pred ccccccccccccchhhcc--------------------------------------------------------------
Confidence 999999999999999841
Q ss_pred HHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCH
Q 042063 336 RRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDL 415 (575)
Q Consensus 336 ~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l 415 (575)
+||+||||++++|++.||+|+.+|+|+||+||+|+..|++
T Consensus 257 ----------------------------------------~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~ 296 (435)
T 3lg3_A 257 ----------------------------------------DRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDL 296 (435)
T ss_dssp ----------------------------------------EECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCH
T ss_pred ----------------------------------------cccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCH
Confidence 5899999999999999999999999999999999999999
Q ss_pred HHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHH-hh
Q 042063 416 AECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYAR-RG 494 (575)
Q Consensus 416 ~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~-~G 494 (575)
+++++|+++|++.+|.++|+||+||||||+++ |+|++|++|+++|++|||++|||+|+|||+.+++|+++++.|++ +|
T Consensus 297 ~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~-~~d~~~~~f~~eLa~lG~~~v~~~la~~raa~~a~~~~a~~~~~~~g 375 (435)
T 3lg3_A 297 ALAKRFADAVHAQFPGKLLAYNCSPSFNWKKN-LTDQQIASFQDELSAMGYKYQFITLAGIHSMWFNMFDLAHAYAQGEG 375 (435)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEECCSSSCHHHH-SCHHHHHHHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHhccccCCeEEEeCCCCCcccccc-CCHHHHHHHHHHHHHcCCcEEEeCcHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999997 99999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHH---hcCCCccccccccCchhHHHHHHHhcCCcchhhcCCCCchhhhh
Q 042063 495 MLAYVERIQREER---NNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQF 551 (575)
Q Consensus 495 M~aYv~~vQ~~E~---~~g~d~~~HQkwsGa~y~D~~~~~v~~g~sst~a~g~~~te~qf 551 (575)
|++||+.||++|+ +.||++++||+|||++|+|.++++|+||+|||+||.++++|+||
T Consensus 376 m~ayve~~Q~~e~~~~~~g~~~~~hq~~~G~~y~d~~~~~~~~g~sst~a~~~~te~~qf 435 (435)
T 3lg3_A 376 MKHYVEKVQQPEFASVDRGYTFASHQQEVGTGYFDKVTNIIQGGASSVTALTGSTEEQQF 435 (435)
T ss_dssp HHHHHHHTHHHHHTTGGGTCCTTSHHHHTTHHHHHHHHHHHHCC----------------
T ss_pred HHHHHHHHHHHHHhhhccCceeeecccccccchHHHHHHHhcCChhhhhhccCCchhccC
Confidence 9999999999998 99999999999999999999999999999999999666566998
No 3
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=100.00 E-value=6.8e-123 Score=985.37 Aligned_cols=422 Identities=41% Similarity=0.678 Sum_probs=384.1
Q ss_pred HHHHHHHHHHhh-ccCCCCCCCCCCCHHHHHHhhCCccccCC-chHHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHH
Q 042063 18 FEAEVAEVQAWW-NSERFRLTRRPYSARDVVALRGSLRQSYG-SNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMA 95 (575)
Q Consensus 18 ~~~~~~~i~~ww-~~~R~~~i~R~Yta~~v~~~rgs~~~~y~-~~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a 95 (575)
-.++|++|++|| .+|||++|+||||++||+++|||++++|+ ++.+|++||++|++ ++++++||||||+||++++
T Consensus 7 ~~~~~~~~~~~w~~~~r~~~i~r~Yta~~v~~lrg~~~~~~~~a~~~a~~Lr~ll~~----~~~l~~~Ga~D~~sA~~~~ 82 (439)
T 3i4e_A 7 RQQQAQELQKQWETDPRWKGIKRAFTAEDVVRLRGSIQQEHTLAKRGAEKLWTLINN----EPFVNALGALTGNQAMQQV 82 (439)
T ss_dssp HHHHHHHHHHHHHHCGGGTTCCCSSCHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHH----SSCEEEEBCCSHHHHHHHH
T ss_pred hHHHHHHHHHHhhcCCCcCCccCCCCHHHHHHHcCCCcccCchHHHHHHHHHHHHhc----CCCEEeCCCCCHHHHHHHH
Confidence 467899999999 78999999999999999999999999998 46899999998875 6899999999999999998
Q ss_pred c-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceee
Q 042063 96 K-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIA 174 (575)
Q Consensus 96 ~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIA 174 (575)
+ ||++||+|||+||++++.+++|+||+++||+++||+.|++|++++++|||+++.+. .++++.+.+||.+||||
T Consensus 83 ~aGf~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~rI~~a~~~ad~i~~~~~-----~~~~~~~~~d~~~Pvia 157 (439)
T 3i4e_A 83 KAGLKAIYLSGWQVAGDANVAGEMYPDQSLYPANSVPLVVKRINNTLTRADQIQWSEG-----KNPGDEGYVDFFAPIVA 157 (439)
T ss_dssp HHTCSCEEECHHHHHHHTCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTT-----CCTTSTTCCCCCCCEEE
T ss_pred HhCCCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHhHhhhhhhc-----cccccccccCCCCCeEE
Confidence 8 89999999999999766678999999999999999999999999999999998632 12344466888999999
Q ss_pred eCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeeccc
Q 042063 175 DGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAE 254 (575)
Q Consensus 175 D~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~ 254 (575)
|+|+|||+++||+++||+|+++||+|||||||+.+||||||++||+|+|++||++||+|||.+++.+|+|||||||||++
T Consensus 158 D~dtGfG~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~ 237 (439)
T 3i4e_A 158 DAEAGFGGVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAE 237 (439)
T ss_dssp ECTTTTSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTT
T ss_pred ECCCCCCccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcc
Confidence 99999999999999999999999999999999966999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchh
Q 042063 255 AATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHE 334 (575)
Q Consensus 255 ~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~ 334 (575)
++++|++++|+|||+|+.|
T Consensus 238 ~a~l~~s~~d~~d~~fi~G------------------------------------------------------------- 256 (439)
T 3i4e_A 238 AADLITSDIDDNDKPYLTG------------------------------------------------------------- 256 (439)
T ss_dssp TCCEESCCCCTTTGGGEEE-------------------------------------------------------------
T ss_pred cccccccccccccchhhcc-------------------------------------------------------------
Confidence 9999999999999999841
Q ss_pred hHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCC
Q 042063 335 KRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPD 414 (575)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~ 414 (575)
.||+||||++++|++.||+|+.+|+|+||+||+|+..|+
T Consensus 257 -----------------------------------------~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~ 295 (439)
T 3i4e_A 257 -----------------------------------------ERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPD 295 (439)
T ss_dssp -----------------------------------------EECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCC
T ss_pred -----------------------------------------cCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCC
Confidence 589999999999999999999999999999999999999
Q ss_pred HHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhh
Q 042063 415 LAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRG 494 (575)
Q Consensus 415 l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~G 494 (575)
++++++|+++|++.+|..+|+||+||||||+++ |+|++|++|+++|++|||++|||+|++||+.+.+|+++++.|+++|
T Consensus 296 ~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~-~~~~~~~~f~~eL~~lGv~~v~~~la~~raa~~A~~~~a~~i~~~G 374 (439)
T 3i4e_A 296 LEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKN-LDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAHGYARTQ 374 (439)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHH-SCHHHHHTHHHHHHHHTCCEEEETTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccCCceEEeeCCCCCCcCccc-CCHHHHHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH---HhcCCCccccccccCchhHHHHHHHhcCCcchhhcCCCCchhhhhhh
Q 042063 495 MLAYVERIQREE---RNNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQFKE 553 (575)
Q Consensus 495 M~aYv~~vQ~~E---~~~g~d~~~HQkwsGa~y~D~~~~~v~~g~sst~a~g~~~te~qf~~ 553 (575)
|++||+ +|++| ++.||++++||+|||++|+|.++++|+| +|||+||++|+||+||++
T Consensus 375 m~ayve-~Q~~e~~~~~~g~~~~~hq~~~G~~y~d~~~~~~~~-~sst~a~~~~~~~~qf~~ 434 (439)
T 3i4e_A 375 MSAFVE-LQQAEFAAADKGFTAVKHQREVGTGYFDAVTQTVER-EASTTALHGSTEDEQFFD 434 (439)
T ss_dssp HHHHHH-HHHHHHHHTTTTCCTTSHHHHTTHHHHHHHHHHHCC-------------------
T ss_pred CHHHHH-HHHHhhhhhhcCcceeecccccccchHHHHHHHHhc-chHhhhccCCccHHHhcc
Confidence 999999 89999 6999999999999999999999999999 999999999999999974
No 4
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=100.00 E-value=5.3e-123 Score=985.73 Aligned_cols=416 Identities=38% Similarity=0.641 Sum_probs=337.1
Q ss_pred HHHHhhccCCCCCCCCCCCHHHHHHhhCCccccCCc-hHHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeE
Q 042063 24 EVQAWWNSERFRLTRRPYSARDVVALRGSLRQSYGS-NEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSI 101 (575)
Q Consensus 24 ~i~~ww~~~R~~~i~R~Yta~~v~~~rgs~~~~y~~-~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AI 101 (575)
.|++||.+|||++|+|||||+||++||||++++||+ +.+|++||++|++ ++++++||||||+||+++++ ||++|
T Consensus 10 ~~~~w~~~~r~~~~~r~yta~~v~~~rgs~~~~~~~~~~~a~~lr~Ll~~----~~~l~~~ga~D~~sA~~~~~aGf~Ai 85 (433)
T 3eol_A 10 SLIPSAPKGRFDGIERAHTAEDVKRLRGSVEIKYSLAEMGANRLWKLIHE----EDFVNALGALSGNQAMQMVRAGLKAI 85 (433)
T ss_dssp TTSTTCCTTTTTTCCCSSCHHHHHHHHCSCCCCCHHHHHHHHHHHHHHHH----SSCEEEEBCSSHHHHHHHHHTTCCCE
T ss_pred eehhcccCccccCCcCCCCHHHHHHhcCCCccCCchHHHHHHHHHHHhcc----CCCEEeCCCCcHHHHHHHHHhCCCEE
Confidence 478999999999999999999999999999999997 5899999998864 68999999999999999987 89999
Q ss_pred eechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCC
Q 042063 102 YVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFG 181 (575)
Q Consensus 102 y~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfG 181 (575)
|+|||+||++++.+++|+||+++||+++|++.|++|++++++|||+++.++. +.+.+||.+|||||+|+|||
T Consensus 86 y~SG~~vAa~~~~~~~G~PD~~~~~~~ev~~~v~rI~~a~~~~d~~~~~~~~--------~~~~~d~~lPIiaD~DtGfG 157 (433)
T 3eol_A 86 YLSGWQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGK--------GLSVDTWFAPIVADAEAGFG 157 (433)
T ss_dssp EEC-----------------------CHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSSCSCCCEEEECC---C
T ss_pred EechHHHHhccchhcCCCCCCccCCHHHHHHHHHHHHHHHHHhhhhhhhhcc--------cccccCCCCCeEEECCCCCC
Confidence 9999999986555578999999999999999999999999999999986432 23567888999999999999
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+++||+++||.|+++||+|||||||+.+||||||++||+|||++||++||+|||.+++.+|+|||||||||++++++|++
T Consensus 158 ~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s 237 (433)
T 3eol_A 158 DPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTS 237 (433)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCcccccccc
Confidence 99999999999999999999999999669999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHH
Q 042063 262 NVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNE 341 (575)
Q Consensus 262 aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~ 341 (575)
+||+|||.|+.|
T Consensus 238 ~~d~rd~~fl~g-------------------------------------------------------------------- 249 (433)
T 3eol_A 238 DIDERDQPFVDY-------------------------------------------------------------------- 249 (433)
T ss_dssp CCSTTTGGGBCS--------------------------------------------------------------------
T ss_pred Ccccccccceec--------------------------------------------------------------------
Confidence 999999999831
Q ss_pred HHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhH
Q 042063 342 WMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKF 421 (575)
Q Consensus 342 ~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~F 421 (575)
|-+||+||||++++|++.||+|+++|+|+||+||+|++.|+++|+++|
T Consensus 250 --------------------------------~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~~~~~~eei~~f 297 (433)
T 3eol_A 250 --------------------------------EAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETSKPDLAQARRF 297 (433)
T ss_dssp --------------------------------SSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHH
T ss_pred --------------------------------cCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHH
Confidence 117999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHHHHHHH
Q 042063 422 AGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAYVER 501 (575)
Q Consensus 422 a~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~aYv~~ 501 (575)
+++|++.+|.++|+||+||||||+++ |++++|++|+++|++|||++|+|+|++||+.+.+|.++++.|+++||.+|||
T Consensus 298 ~~~v~~~~P~~~L~~~~sPsfnw~~~-~~~~~~~~f~~eLa~lGv~~v~~~~a~~raa~~A~~~~a~~i~~~G~~ayve- 375 (433)
T 3eol_A 298 AEAVHKAHPGKLLAYNCSPSFNWKKN-LDDATIAKFQRELGAMGYKFQFITLAGFHQLNYGMFELARGYKDRQMAAYSE- 375 (433)
T ss_dssp HHHHHHHSTTCCEEEECCSSSCHHHH-SCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHH-
T ss_pred HHHhcccCCCcccccCCCCCCccccc-CChhHHhHHHHHHHHcCCeEEEeCcHHHHHHHHHHHHHHHHHHHcCCHHHHH-
Confidence 99999999999999999999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HhcCCCccccccccCchhHHHHHHHhcCCcchhhcCCCCchhhhhhh
Q 042063 502 IQREE---RNNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQFKE 553 (575)
Q Consensus 502 vQ~~E---~~~g~d~~~HQkwsGa~y~D~~~~~v~~g~sst~a~g~~~te~qf~~ 553 (575)
||++| ++.||++++||+|||++|+|.++++|+||+|||+||.++++|+||+.
T Consensus 376 ~Q~~e~~~~~~g~~~~~hq~~~g~~y~d~~~~~~~~g~sst~a~~~~te~~qf~~ 430 (433)
T 3eol_A 376 LQQAEFAAEADGYTATKHQREVGTGYFDAVSLAITGGQSSTTAMKESTETAQFKP 430 (433)
T ss_dssp HHHHHHHHGGGTCCCC--------CHHHHHHHHHCC-------------------
T ss_pred HHHHhhhhhccCceeeecccccccchHHHHHHHhcCChhhhhhccCCchHHhcCC
Confidence 89999 68999999999999999999999999999999999976767799963
No 5
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=100.00 E-value=2e-120 Score=966.76 Aligned_cols=415 Identities=42% Similarity=0.681 Sum_probs=395.3
Q ss_pred HHHHHHHHhhc-cCCCCCCCCCCCHHHHHHhhCCccccCC-chHHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-
Q 042063 20 AEVAEVQAWWN-SERFRLTRRPYSARDVVALRGSLRQSYG-SNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK- 96 (575)
Q Consensus 20 ~~~~~i~~ww~-~~R~~~i~R~Yta~~v~~~rgs~~~~y~-~~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~- 96 (575)
+++++|++||. +|||++|+||||++||+++|||+++.|+ ++.++++||++|++ ++++++||||||+||+++++
T Consensus 9 ~~~~~~~~~w~~~~r~~~i~r~yt~~~v~~lr~s~~~~~~~~~~~a~~lr~lL~~----~~~~~~~ga~d~~sA~~~~~a 84 (429)
T 1f8m_A 9 KSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHD----LEWVNALGALTGNMAVQQVRA 84 (429)
T ss_dssp CCHHHHHHHHHHCGGGTTCCCSSCHHHHHHHSTTCCCCCHHHHHHHHHHHHHHHH----SSCEEEEBCCSHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCcCceeCCCCHHHHHHHhCCccccCchHHHHHHHHHHHHhc----CCceecCCCCCHHHHHHHHHc
Confidence 46899999998 9999999999999999999999999999 56899999999975 37999999999999999887
Q ss_pred cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeC
Q 042063 97 HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIADG 176 (575)
Q Consensus 97 gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~ 176 (575)
||++||+|||+||++++++++|+||+++||+++|++.|++|++++++|||+|+.++ +.+..||.+|||||+
T Consensus 85 Gf~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~---------~~~~~d~~~PIiaD~ 155 (429)
T 1f8m_A 85 GLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEG---------DTSVENWLAPIVADG 155 (429)
T ss_dssp TCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHT---------CCSCSCSSCCEEEEC
T ss_pred CCCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhc---------cCccccCCCCEEEEC
Confidence 89999999999999877788999999999999999999999999999999999754 123227789999999
Q ss_pred CCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeeccccc
Q 042063 177 DTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAA 256 (575)
Q Consensus 177 DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a 256 (575)
|+|||+++||+++||.|+++||+|||||||+.+||||||++||+|+|++||++||+|||.++|.+|+|||||||||++++
T Consensus 156 DtGfG~~~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a 235 (429)
T 1f8m_A 156 EAGFGGALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAA 235 (429)
T ss_dssp TTTTSSHHHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTC
T ss_pred CCCCCCcHHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhh
Confidence 99999999999999999999999999999997799999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhH
Q 042063 257 TLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKR 336 (575)
Q Consensus 257 ~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~ 336 (575)
++|++++|+|||+|+.|
T Consensus 236 ~li~s~~d~~d~~fl~g--------------------------------------------------------------- 252 (429)
T 1f8m_A 236 TLITSDVDERDQPFITG--------------------------------------------------------------- 252 (429)
T ss_dssp CEESCCCSTTTGGGEEE---------------------------------------------------------------
T ss_pred ccccccccccccccccC---------------------------------------------------------------
Confidence 99999999999999842
Q ss_pred HHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHH
Q 042063 337 RRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLA 416 (575)
Q Consensus 337 ~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~ 416 (575)
.|++||||+|++|++.||+|+.+|+|+||+||+||+.|+++
T Consensus 253 ---------------------------------------~~~~eg~y~~~~gld~AI~Ra~AYa~gAD~if~e~~~~~~e 293 (429)
T 1f8m_A 253 ---------------------------------------ERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLE 293 (429)
T ss_dssp ---------------------------------------EECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHH
T ss_pred ---------------------------------------CCCcccccccccCHHHHHHHHHHHHhcCCEEEeCCCCCCHH
Confidence 46789999999999999999999999999999999999999
Q ss_pred HHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHH
Q 042063 417 ECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGML 496 (575)
Q Consensus 417 ~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~ 496 (575)
++++|+++|++++|.++|+||+||||||+++ |+|++|++|+++|++|||++|||||++||+.+.+|.++++.|+++||.
T Consensus 294 ei~~f~~~v~~~~P~~~La~n~sPsf~w~~~-~~~~~~~~f~~eL~~lG~~~v~~~l~~~raa~~a~~~~a~~~~~~G~~ 372 (429)
T 1f8m_A 294 AARQFSEAVKAEYPDQMLAYNCSPSFNWKKH-LDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMS 372 (429)
T ss_dssp HHHHHHHHHHTTCTTCEEEEECCTTSCHHHH-CCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHhcccCCCceeecCCCCCCCcccc-cchhhHhHHHHHHHHcCCeEEEECcHHHHHHHHHHHHHHHHHHHcCCh
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH---hcCCCccccccccCchhHHHHHHHhcCCcchhhcCCCCchhhhhh
Q 042063 497 AYVERIQREER---NNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQFK 552 (575)
Q Consensus 497 aYv~~vQ~~E~---~~g~d~~~HQkwsGa~y~D~~~~~v~~g~sst~a~g~~~te~qf~ 552 (575)
+||+ ||++|+ +.||++++||+|||++|+|.++++|+| .|||+||++|+||+|||
T Consensus 373 ay~e-~Q~~e~~~~~~g~~~~~hq~~~G~~~~d~~~~~~~~-~ss~~a~~~~~~~~qf~ 429 (429)
T 1f8m_A 373 AYVE-LQEREFAAEERGYTATKHQREVGAGYFDRIATTVDP-NSSTTALTGSTEEGQFH 429 (429)
T ss_dssp HHHH-HHHHHHHHGGGTCCTTSHHHHTTHHHHHHHHHHHCT-TCSCCSSTTCHHHHHC-
T ss_pred HHHH-HhHHHHhhhccCcchhhhhhhhccchHHHHHHHhcc-chHHHHhcCCcchhhcC
Confidence 9999 899998 899999999999999999999999998 99999999999999996
No 6
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=100.00 E-value=7.5e-50 Score=409.80 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=227.0
Q ss_pred HHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHH
Q 042063 62 MAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFA 140 (575)
Q Consensus 62 ~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~a 140 (575)
.+++||+++ ++++++++||+||++||+++.+ ||++||+|||++|.+ .+|+||.+.+|+++++..+++|+++
T Consensus 10 ~~~~lr~l~----~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~----~~G~pD~~~vt~~em~~~~~~I~r~ 81 (298)
T 3eoo_A 10 AGAKFRAAV----AAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAAN----SLGIPDLGISTMDDVLVDANRITNA 81 (298)
T ss_dssp HHHHHHHHH----HHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHH----TTCCCSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----hCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHH----hcCCCCCCCCCHHHHHHHHHHHHhh
Confidence 455666544 4689999999999999998776 899999999999954 6899999999999999999999863
Q ss_pred hhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCc
Q 042063 141 QQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKV 220 (575)
Q Consensus 141 q~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~ 220 (575)
++ +|||||+|+|||++.|++++++.|+++||+|||||||+ +||||||++||+
T Consensus 82 -------------------------~~--~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~-~~k~cGh~~gk~ 133 (298)
T 3eoo_A 82 -------------------------TN--LPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQV-GQKRCGHRPGKE 133 (298)
T ss_dssp -------------------------CC--SCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBC-CCCCTTCCCCCC
T ss_pred -------------------------cC--CeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCC-CCcccCCCCCCe
Confidence 56 99999999999999999999999999999999999999 699999999999
Q ss_pred ccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHH
Q 042063 221 LVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAE 300 (575)
Q Consensus 221 Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~e 300 (575)
|+|++||++||+||+.+++ ++||+||||||++...+++++|+ |+++|.+
T Consensus 134 l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTDa~~~~gldeai~-Ra~ay~~---------------------------- 182 (298)
T 3eoo_A 134 CVPAGEMVDRIKAAVDART--DETFVIMARTDAAAAEGIDAAIE-RAIAYVE---------------------------- 182 (298)
T ss_dssp BCCHHHHHHHHHHHHHHCS--STTSEEEEEECTHHHHHHHHHHH-HHHHHHH----------------------------
T ss_pred ecCHHHHHHHHHHHHHhcc--CCCeEEEEeehhhhhcCHHHHHH-HHHhhHh----------------------------
Confidence 9999999999999999886 89999999999998888999999 9999963
Q ss_pred HHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCC
Q 042063 301 LQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTRE 380 (575)
Q Consensus 301 i~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~e 380 (575)
.|
T Consensus 183 ----------------------------------------------------------------AG-------------- 184 (298)
T 3eoo_A 183 ----------------------------------------------------------------AG-------------- 184 (298)
T ss_dssp ----------------------------------------------------------------TT--------------
T ss_pred ----------------------------------------------------------------cC--------------
Confidence 02
Q ss_pred ccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCC--ceeeecCCcccccccCCCCHHHHHhhH
Q 042063 381 GFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPE--IMLAYNLSPSFNWDASGMTDEEMKDFI 458 (575)
Q Consensus 381 G~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~--~~laYN~SPSFnW~~~G~s~~~i~~F~ 458 (575)
||+||+|.. ++.+++++|++.++ -|= -++.|+.+|+|+ .
T Consensus 185 ----------------------AD~if~~~~-~~~ee~~~~~~~~~--~Pl~~n~~~~g~tp~~~--------------~ 225 (298)
T 3eoo_A 185 ----------------------ADMIFPEAM-KTLDDYRRFKEAVK--VPILANLTEFGSTPLFT--------------L 225 (298)
T ss_dssp ----------------------CSEEEECCC-CSHHHHHHHHHHHC--SCBEEECCTTSSSCCCC--------------H
T ss_pred ----------------------CCEEEeCCC-CCHHHHHHHHHHcC--CCeEEEeccCCCCCCCC--------------H
Confidence 999999996 69999999999996 453 356688889887 4
Q ss_pred HHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHHHH
Q 042063 459 PRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAY 498 (575)
Q Consensus 459 ~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~aY 498 (575)
.+|+++||..+++++..+|....++.+.++.++++|+..-
T Consensus 226 ~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~g~~~~ 265 (298)
T 3eoo_A 226 DELKGANVDIALYCCGAYRAMNKAALNFYETVRRDGTQKA 265 (298)
T ss_dssp HHHHHTTCCEEEECSHHHHHHHHHHHHHHHHHHHHSSSGG
T ss_pred HHHHHcCCeEEEEchHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 8999999999999999999999999999999999987643
No 7
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=100.00 E-value=3.2e-48 Score=397.44 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=207.6
Q ss_pred HHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHh
Q 042063 63 AKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQ 141 (575)
Q Consensus 63 A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq 141 (575)
+++||+ +|++++++++||+||++||+++++ ||++||+|||++|+ .+|+||.+.+|+++++..+++|++
T Consensus 8 ~~~lr~----l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~-----~lG~pD~~~vt~~em~~~~~~I~~-- 76 (295)
T 1s2w_A 8 TTQLKQ----MLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSA-----QLGVRDSNEASWTQVVEVLEFMSD-- 76 (295)
T ss_dssp HHHHHH----HHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHH-----TC---------CHHHHHHHHHHHH--
T ss_pred HHHHHH----HHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHH-----hCCCCCCCCCCHHHHHHHHHHHHh--
Confidence 455555 455789999999999999998887 89999999999996 489999999999999999999985
Q ss_pred hhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCC--C
Q 042063 142 QYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAG--K 219 (575)
Q Consensus 142 ~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~G--k 219 (575)
.++ +|||||+|+|||++.|+++++++|+++||+|||||||. .+|+|||++| |
T Consensus 77 -----------------------~~~--~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~-~~k~cgH~gg~~k 130 (295)
T 1s2w_A 77 -----------------------ASD--VPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKL-FPKTNSLHDGRAQ 130 (295)
T ss_dssp -----------------------TCS--SCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBC-C--------CTTC
T ss_pred -----------------------cCC--CCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCC-CCccccccCCCCC
Confidence 356 99999999999999999999999999999999999998 5999999986 9
Q ss_pred cccCHHHHHHHHHHHHHhhhhcCCceEEEEeeccc-ccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCH
Q 042063 220 VLVAISEHINRLVAARLQFDVMGVETVLVARTDAE-AATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTG 298 (575)
Q Consensus 220 ~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~-~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~ 298 (575)
+|+|.+||++||+|++.+++ +++|+|+||||++ ...+++++|+ |+++|.+
T Consensus 131 ~l~p~~e~~~rI~Aa~~a~~--~~~~~i~aRtda~~a~~g~~~ai~-Ra~ay~e-------------------------- 181 (295)
T 1s2w_A 131 PLADIEEFALKIKACKDSQT--DPDFCIVARVEAFIAGWGLDEALK-RAEAYRN-------------------------- 181 (295)
T ss_dssp CBCCHHHHHHHHHHHHHHCS--STTCEEEEEECTTTTTCCHHHHHH-HHHHHHH--------------------------
T ss_pred cccCHHHHHHHHHHHHHhcc--cCCcEEEEeehHHhccccHHHHHH-HHHHHHH--------------------------
Confidence 99999999999999999875 6899999999998 4457888888 8888852
Q ss_pred HHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCC
Q 042063 299 AELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRT 378 (575)
Q Consensus 299 ~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt 378 (575)
.|
T Consensus 182 ------------------------------------------------------------------AG------------ 183 (295)
T 1s2w_A 182 ------------------------------------------------------------------AG------------ 183 (295)
T ss_dssp ------------------------------------------------------------------TT------------
T ss_pred ------------------------------------------------------------------cC------------
Confidence 12
Q ss_pred CCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhH
Q 042063 379 REGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFI 458 (575)
Q Consensus 379 ~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~ 458 (575)
||+||+|+..|+.+++++|++.|+...|- .+|.+ .|+ .++ .
T Consensus 184 ------------------------Ad~i~~e~~~~~~~~~~~i~~~~~~~~P~---i~~~~-~~~-----~~~------~ 224 (295)
T 1s2w_A 184 ------------------------ADAILMHSKKADPSDIEAFMKAWNNQGPV---VIVPT-KYY-----KTP------T 224 (295)
T ss_dssp ------------------------CSEEEECCCSSSSHHHHHHHHHHTTCSCE---EECCS-TTT-----TSC------H
T ss_pred ------------------------CCEEEEcCCCCCHHHHHHHHHHcCCCCCE---EEeCC-CCC-----CCC------H
Confidence 99999999999999999999999866674 45532 242 232 5
Q ss_pred HHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHHHHHH
Q 042063 459 PRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAYVE 500 (575)
Q Consensus 459 ~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~aYv~ 500 (575)
++|+++||.+++++++++|+...++.++++.++++|+..|+.
T Consensus 225 ~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~g~~~~~~ 266 (295)
T 1s2w_A 225 DHFRDMGVSMVIWANHNLRASVSAIQQTTKQIYDDQSLVNVE 266 (295)
T ss_dssp HHHHHHTCCEEEECSHHHHHHHHHHHHHHHHHHHHSSSTTTG
T ss_pred HHHHHcCCcEEEEChHHHHHHHHHHHHHHHHHHHcCCccchh
Confidence 899999999999999999999999999999999999998864
No 8
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=100.00 E-value=5e-48 Score=399.30 Aligned_cols=260 Identities=25% Similarity=0.317 Sum_probs=227.0
Q ss_pred cCCchHHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHH
Q 042063 56 SYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKV 134 (575)
Q Consensus 56 ~y~~~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v 134 (575)
.+|++..+++||++++ +++++++||+||++||+++.+ ||++||+|||++|.+ .+|+||.+.+|+++++..+
T Consensus 21 ~~~~~~~~~~lr~l~~----~~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~----~lG~pD~~~vt~~em~~~~ 92 (318)
T 1zlp_A 21 TAVSTGRKTTMHRLIE----EHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAA----MLGLPDFGLLTTTEVVEAT 92 (318)
T ss_dssp -------CCHHHHHHH----HSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHH----HHCCCSSSCSCHHHHHHHH
T ss_pred cccchhHHHHHHHHHh----CCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhH----hcCCCCCCCCCHHHHHHHH
Confidence 3566666777777554 578999999999999998776 899999999999853 4899999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHhhccHhhhhcCCCC-CCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCccccc
Q 042063 135 EHLFFAQQYHDRKQREARMSMSREERARTPCV-DYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKC 213 (575)
Q Consensus 135 ~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~v-d~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkC 213 (575)
++|+++ + + +|||+|+|+|||++.|+++++++|+++||+|||||||. .+|+|
T Consensus 93 ~~I~r~-------------------------~~~--~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~-~~k~c 144 (318)
T 1zlp_A 93 RRITAA-------------------------APN--LCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQV-WPKKC 144 (318)
T ss_dssp HHHHHH-------------------------SSS--SEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBC-SSCCC
T ss_pred HHHHhh-------------------------ccC--CCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCC-CCccc
Confidence 999863 4 6 99999999999999999999999999999999999998 69999
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHH
Q 042063 214 GHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMA 293 (575)
Q Consensus 214 GH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s 293 (575)
||++||+|+|.+|+++||+|++.+++ +++|+|+||||++...+++++|+ |+++|.+
T Consensus 145 gH~~gk~L~p~~e~~~rI~Aa~~A~~--~~~~~I~ARtda~a~~gl~~ai~-Ra~Ay~e--------------------- 200 (318)
T 1zlp_A 145 GHMRGKAVVPAEEHALKIAAAREAIG--DSDFFLVARTDARAPHGLEEGIR-RANLYKE--------------------- 200 (318)
T ss_dssp SSSSCCCBCCHHHHHHHHHHHHHHHT--TSCCEEEEEECTHHHHHHHHHHH-HHHHHHH---------------------
T ss_pred cCCCCCccCCHHHHHHHHHHHHHhcc--cCCcEEEEeeHHhhhcCHHHHHH-HHHHHHH---------------------
Confidence 99999999999999999999999886 58999999999998778888998 9888862
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccC
Q 042063 294 AGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDW 373 (575)
Q Consensus 294 ~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dw 373 (575)
.|
T Consensus 201 -----------------------------------------------------------------------AG------- 202 (318)
T 1zlp_A 201 -----------------------------------------------------------------------AG------- 202 (318)
T ss_dssp -----------------------------------------------------------------------TT-------
T ss_pred -----------------------------------------------------------------------cC-------
Confidence 12
Q ss_pred CCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHH
Q 042063 374 DLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEE 453 (575)
Q Consensus 374 d~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~ 453 (575)
||+||+|. .|+.+++++|++.|+ .| +..|+++ |+|+.. +|
T Consensus 203 -----------------------------Ad~i~~e~-~~~~e~~~~i~~~l~--~P---~lan~~~-~g~~~~-~~--- 242 (318)
T 1zlp_A 203 -----------------------------ADATFVEA-PANVDELKEVSAKTK--GL---RIANMIE-GGKTPL-HT--- 242 (318)
T ss_dssp -----------------------------CSEEEECC-CCSHHHHHHHHHHSC--SE---EEEEECT-TSSSCC-CC---
T ss_pred -----------------------------CCEEEEcC-CCCHHHHHHHHHhcC--CC---EEEEecc-CCCCCC-CC---
Confidence 99999998 599999999999996 45 5559888 898875 77
Q ss_pred HHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHHH
Q 042063 454 MKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLA 497 (575)
Q Consensus 454 i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~a 497 (575)
..+|+++||..++++++.+|....++.+.++.++++|+..
T Consensus 243 ----~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~g~~~ 282 (318)
T 1zlp_A 243 ----PEEFKEMGFHLIAHSLTAVYATARALVNIMKILKEKGTTR 282 (318)
T ss_dssp ----HHHHHHHTCCEEEECSHHHHHHHHHHHHHHHHHHHHSCST
T ss_pred ----HHHHHHcCCeEEEEchHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 3788999999999999999999999999999999988754
No 9
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=100.00 E-value=1.5e-47 Score=392.36 Aligned_cols=250 Identities=23% Similarity=0.368 Sum_probs=225.9
Q ss_pred HHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHh
Q 042063 63 AKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQ 141 (575)
Q Consensus 63 A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq 141 (575)
+++||+++ ++++++++||+||++||+++.+ ||++||+|||++|++ .+|+||.+.+|+++++..+++|+++
T Consensus 6 ~~~lr~l~----~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~----~~G~pD~~~vt~~em~~~~~~I~~~- 76 (295)
T 1xg4_A 6 GKAFRAAL----TKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAG----SLGLPDLGISTLDDVLTDIRRITDV- 76 (295)
T ss_dssp HHHHHHHH----HHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHT----TTCCCSSSCSCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHH----hCCCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhh----hcCCCCCCCCCHHHHHHHHHHHHhh-
Confidence 55566544 4678999999999999998776 899999999999874 5899999999999999999999863
Q ss_pred hhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCC-CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCc
Q 042063 142 QYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFG-GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKV 220 (575)
Q Consensus 142 ~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfG-g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~ 220 (575)
++ +|||+|+|+||| ++.|+++++++|+++||+|||||||. ++|+|||++||+
T Consensus 77 ------------------------~~--~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~-~~k~cgH~~gk~ 129 (295)
T 1xg4_A 77 ------------------------CS--LPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQV-GAKRSGHRPNKA 129 (295)
T ss_dssp ------------------------CC--SCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBC-SSCCCTTSSSCC
T ss_pred ------------------------CC--CCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCC-CCcccCCCCCCc
Confidence 56 899999999999 89999999999999999999999999 799999999999
Q ss_pred ccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHH
Q 042063 221 LVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAE 300 (575)
Q Consensus 221 Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~e 300 (575)
|+|.+|+++||+|++.+++ +++|+|+||||++...+++++|+ |+++|.+
T Consensus 130 L~p~~~~~~~I~Aa~~a~~--~~~~~i~aRtda~~~~gl~~ai~-ra~ay~e---------------------------- 178 (295)
T 1xg4_A 130 IVSKEEMVDRIRAAVDAKT--DPDFVIMARTDALAVEGLDAAIE-RAQAYVE---------------------------- 178 (295)
T ss_dssp BCCHHHHHHHHHHHHHHCS--STTSEEEEEECCHHHHCHHHHHH-HHHHHHH----------------------------
T ss_pred cCCHHHHHHHHHHHHHhcc--CCCcEEEEecHHhhhcCHHHHHH-HHHHHHH----------------------------
Confidence 9999999999999999876 78999999999998778888888 8888862
Q ss_pred HHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCC
Q 042063 301 LQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTRE 380 (575)
Q Consensus 301 i~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~e 380 (575)
.|
T Consensus 179 ----------------------------------------------------------------AG-------------- 180 (295)
T 1xg4_A 179 ----------------------------------------------------------------AG-------------- 180 (295)
T ss_dssp ----------------------------------------------------------------TT--------------
T ss_pred ----------------------------------------------------------------cC--------------
Confidence 12
Q ss_pred ccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCC--ceeeecCCcccccccCCCCHHHHHhhH
Q 042063 381 GFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPE--IMLAYNLSPSFNWDASGMTDEEMKDFI 458 (575)
Q Consensus 381 G~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~--~~laYN~SPSFnW~~~G~s~~~i~~F~ 458 (575)
||+||+|. .|+.+++++|++.|+ -|= .++.||++|+|+|
T Consensus 181 ----------------------Ad~i~~e~-~~~~~~~~~i~~~~~--iP~~~N~~~~g~~p~~~~-------------- 221 (295)
T 1xg4_A 181 ----------------------AEMLFPEA-ITELAMYRQFADAVQ--VPILANITEFGATPLFTT-------------- 221 (295)
T ss_dssp ----------------------CSEEEETT-CCSHHHHHHHHHHHC--SCBEEECCSSSSSCCCCH--------------
T ss_pred ----------------------CCEEEEeC-CCCHHHHHHHHHHcC--CCEEEEecccCCCCCCCH--------------
Confidence 99999998 599999999999996 474 3667999999998
Q ss_pred HHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHH
Q 042063 459 PRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGML 496 (575)
Q Consensus 459 ~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~ 496 (575)
.+|+++||..++++++.+|+...++.+.++.++++|..
T Consensus 222 ~eL~~~G~~~v~~~~~~~~aa~~a~~~~~~~i~~~g~~ 259 (295)
T 1xg4_A 222 DELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQ 259 (295)
T ss_dssp HHHHHTTCSEEEESSHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHcCCCEEEEChHHHHHHHHHHHHHHHHHHHhCCc
Confidence 78999999999999999999999999999999998854
No 10
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=100.00 E-value=7.1e-47 Score=388.88 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=224.5
Q ss_pred HHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHH
Q 042063 61 EMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFF 139 (575)
Q Consensus 61 ~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~ 139 (575)
..+++||+ +|++++++++||+||++||+++.+ ||++||+|||++|++ .|+||.+.+|+++++..+++|++
T Consensus 16 ~~a~~lr~----l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~-----~G~pD~~~vt~~em~~~~~~I~r 86 (305)
T 3ih1_A 16 ELANRFRA----LVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTAS-----KGLPDLGIVTSTEVAERARDLVR 86 (305)
T ss_dssp HHHHHHHH----HHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHH-----HTCCSSSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHh-----CCCCCCCcCCHHHHHHHHHHHHH
Confidence 45565555 455789999999999999998776 899999999999974 69999999999999999999986
Q ss_pred HhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCC
Q 042063 140 AQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGK 219 (575)
Q Consensus 140 aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk 219 (575)
+ ++ +|||+|+|+|||++.|++++++.|+++||+|||||||. .||||||++||
T Consensus 87 ~-------------------------~~--~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~-~~krcGh~~gk 138 (305)
T 3ih1_A 87 A-------------------------TD--LPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQ-LPKKCGHLNGK 138 (305)
T ss_dssp H-------------------------HC--CCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBC-SSCCTTCTTCC
T ss_pred h-------------------------cC--CCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCC-CCcccCCCCCC
Confidence 3 45 89999999999999999999999999999999999998 69999999999
Q ss_pred cccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHH
Q 042063 220 VLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGA 299 (575)
Q Consensus 220 ~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ 299 (575)
+|+|++|+++||+|++.+ ++||+||||||++...+++++|+ |+++|.+
T Consensus 139 ~l~~~~e~~~rI~Aa~~A----~~~~~I~ARtda~~~~g~~~ai~-Ra~ay~e--------------------------- 186 (305)
T 3ih1_A 139 KLVTTEELVQKIKAIKEV----APSLYIVARTDARGVEGLDEAIE-RANAYVK--------------------------- 186 (305)
T ss_dssp CBCCHHHHHHHHHHHHHH----CTTSEEEEEECCHHHHCHHHHHH-HHHHHHH---------------------------
T ss_pred cccCHHHHHHHHHHHHHc----CCCeEEEEeeccccccCHHHHHH-HHHHHHH---------------------------
Confidence 999999999999999987 78999999999998778999998 9999963
Q ss_pred HHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCC
Q 042063 300 ELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTR 379 (575)
Q Consensus 300 ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~ 379 (575)
.|
T Consensus 187 -----------------------------------------------------------------AG------------- 188 (305)
T 3ih1_A 187 -----------------------------------------------------------------AG------------- 188 (305)
T ss_dssp -----------------------------------------------------------------HT-------------
T ss_pred -----------------------------------------------------------------cC-------------
Confidence 02
Q ss_pred CccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHH
Q 042063 380 EGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIP 459 (575)
Q Consensus 380 eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~ 459 (575)
||+||+|.. |+.+++++|++.|+.-..-.|+.|+.+|+|+ ..
T Consensus 189 -----------------------AD~i~~e~~-~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~--------------~~ 230 (305)
T 3ih1_A 189 -----------------------ADAIFPEAL-QSEEEFRLFNSKVNAPLLANMTEFGKTPYYS--------------AE 230 (305)
T ss_dssp -----------------------CSEEEETTC-CSHHHHHHHHHHSCSCBEEECCTTSSSCCCC--------------HH
T ss_pred -----------------------CCEEEEcCC-CCHHHHHHHHHHcCCCEEEeecCCCCCCCCC--------------HH
Confidence 999999986 8999999999999742222367788888876 48
Q ss_pred HHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHHHH
Q 042063 460 RIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAY 498 (575)
Q Consensus 460 ~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~aY 498 (575)
+|+++||...+++++.++....++.+.++.++++|+...
T Consensus 231 eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~g~~~~ 269 (305)
T 3ih1_A 231 EFANMGFQMVIYPVTSLRVAAKAYENVFTLIKETGSQKD 269 (305)
T ss_dssp HHHHTTCSEEEECSHHHHHHHHHHHHHHHHHHHHSSCGG
T ss_pred HHHHcCCCEEEEchHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 899999999999999999999999999999999987643
No 11
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=100.00 E-value=1.5e-46 Score=386.71 Aligned_cols=269 Identities=23% Similarity=0.277 Sum_probs=214.5
Q ss_pred CCccccCCchHHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCc
Q 042063 51 GSLRQSYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDT 129 (575)
Q Consensus 51 gs~~~~y~~~~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~t 129 (575)
||+..+-+....+++||++|++ +++++++||+||++||+++++ ||++||+||++++++ .+|+||.+.+|+++
T Consensus 1 ~~~~~~~~~~~~a~~lr~ll~~---~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s----~~G~pD~~~vt~~e 73 (307)
T 3lye_A 1 GSHMAEDEPFSGAKKLRHLLEN---TDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTAS----RLGQPDLAIAQLHD 73 (307)
T ss_dssp -------CTTCHHHHHHHHHHH---CCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHH----HHCCCSSSCSCHHH
T ss_pred CCcccCCCchhHHHHHHHHHhC---CCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHH----hcCCCCCCCCCHHH
Confidence 5555554555689999998864 457999999999999998776 899999999999874 58999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCc
Q 042063 130 VPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSV 209 (575)
Q Consensus 130 v~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~ 209 (575)
++..+++|.++ +++.+|||||+|+|||++.|++++++.|+++||+|||||||+ .
T Consensus 74 m~~~~~~i~r~-------------------------~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~-~ 127 (307)
T 3lye_A 74 MRDNADMIANL-------------------------DPFGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQI-L 127 (307)
T ss_dssp HHHHHHHHHTS-------------------------STTSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBC-C
T ss_pred HHHHHHhhhcc-------------------------CCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCC-C
Confidence 99999999742 222399999999999999999999999999999999999999 6
Q ss_pred ccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHH
Q 042063 210 TKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILA 289 (575)
Q Consensus 210 ~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~ 289 (575)
||||||++||+|+|++||++||+|||.+++.+|+||+||||||++...+++++|+ |+++|.+
T Consensus 128 ~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~-Ra~ay~e----------------- 189 (307)
T 3lye_A 128 TKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIE-RLRAARD----------------- 189 (307)
T ss_dssp CC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHH-HHHHHHH-----------------
T ss_pred CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHH-HHHHHHH-----------------
Confidence 9999999999999999999999999999998899999999999998888999999 9999973
Q ss_pred HHHHCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCc
Q 042063 290 EAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNL 369 (575)
Q Consensus 290 ~~~s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~ 369 (575)
.|
T Consensus 190 ---------------------------------------------------------------------------AG--- 191 (307)
T 3lye_A 190 ---------------------------------------------------------------------------EG--- 191 (307)
T ss_dssp ---------------------------------------------------------------------------TT---
T ss_pred ---------------------------------------------------------------------------CC---
Confidence 02
Q ss_pred cccCCCCCCCCccccccCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCC
Q 042063 370 FWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGM 449 (575)
Q Consensus 370 ~~dwd~~Rt~eG~y~~~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~ 449 (575)
||+||+|- .++.+++++|++.+. +..+.+|+.|.-. ...+
T Consensus 192 ---------------------------------AD~ifi~~-~~~~~~~~~i~~~~~----~~Pv~~n~~~~g~--~p~~ 231 (307)
T 3lye_A 192 ---------------------------------ADVGLLEG-FRSKEQAAAAVAALA----PWPLLLNSVENGH--SPLI 231 (307)
T ss_dssp ---------------------------------CSEEEECC-CSCHHHHHHHHHHHT----TSCBEEEEETTSS--SCCC
T ss_pred ---------------------------------CCEEEecC-CCCHHHHHHHHHHcc----CCceeEEeecCCC--CCCC
Confidence 89999995 589999999999985 3556777654211 0113
Q ss_pred CHHHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhH
Q 042063 450 TDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGM 495 (575)
Q Consensus 450 s~~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM 495 (575)
|. .+|+++||..-......+.....++.+.++.++++|-
T Consensus 232 t~-------~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~g~ 270 (307)
T 3lye_A 232 TV-------EEAKAMGFRIMIFSFATLAPAYAAIRETLVRLRDHGV 270 (307)
T ss_dssp CH-------HHHHHHTCSEEEEETTTHHHHHHHHHHHHHHHHHHSC
T ss_pred CH-------HHHHHcCCeEEEEChHHHHHHHHHHHHHHHHHHHhCC
Confidence 42 6789999987777777777777788888888877764
No 12
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=100.00 E-value=4.7e-46 Score=380.58 Aligned_cols=248 Identities=22% Similarity=0.266 Sum_probs=214.0
Q ss_pred HHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHH
Q 042063 70 LKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQ 148 (575)
Q Consensus 70 L~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q 148 (575)
|+++|++++++++||+||++||+++++ ||++||+|||++|++ +|+||.+.+|+++++..+++|++
T Consensus 7 lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~-----~G~pD~~~vt~~em~~~~~~I~~--------- 72 (290)
T 2hjp_A 7 LRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSAS-----YAVPDANILSMSTHLEMMRAIAS--------- 72 (290)
T ss_dssp HHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHH-----TTSCTTTCSCHHHHHHHHHHHHT---------
T ss_pred HHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHh-----CCCCCCCCCCHHHHHHHHHHHHh---------
Confidence 444455689999999999999998876 899999999999973 89999999999999999999975
Q ss_pred HHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCC--CCcccCHHH
Q 042063 149 REARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMA--GKVLVAISE 226 (575)
Q Consensus 149 ~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~--Gk~Lvp~~E 226 (575)
.++ +|||||+|+|||++.|+++++++|+++||+|||||||. .+|+|||++ ||+|+|.+|
T Consensus 73 ----------------~~~--~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~-~~k~cgH~~~~~k~l~p~~e 133 (290)
T 2hjp_A 73 ----------------TVS--IPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKT-FPKDTSLRTDGRQELVRIEE 133 (290)
T ss_dssp ----------------TCS--SCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBC-SSCCC-------CCBCCHHH
T ss_pred ----------------cCC--CCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCC-CCccccccccCCCcccCHHH
Confidence 366 99999999999999999999999999999999999998 699999999 999999999
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEeeccc-ccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHH
Q 042063 227 HINRLVAARLQFDVMGVETVLVARTDAE-AATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIE 305 (575)
Q Consensus 227 ~v~RL~AAR~a~d~~g~d~vIiARTDA~-~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~ 305 (575)
|++||+|++.+++ .++|+|+||||++ ...+++++|+ |+++|.+
T Consensus 134 ~~~kI~Aa~~a~~--~~~~~i~aRtda~~a~~g~~~ai~-Ra~ay~e--------------------------------- 177 (290)
T 2hjp_A 134 FQGKIAAATAARA--DRDFVVIARVEALIAGLGQQEAVR-RGQAYEE--------------------------------- 177 (290)
T ss_dssp HHHHHHHHHHHCS--STTSEEEEEECTTTTTCCHHHHHH-HHHHHHH---------------------------------
T ss_pred HHHHHHHHHHhcc--cCCcEEEEeehHhhccccHHHHHH-HHHHHHH---------------------------------
Confidence 9999999999875 3789999999998 5567888888 8888862
Q ss_pred HHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCccccc
Q 042063 306 DNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRF 385 (575)
Q Consensus 306 ~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~ 385 (575)
.
T Consensus 178 -----------------------------------------------------------A-------------------- 178 (290)
T 2hjp_A 178 -----------------------------------------------------------A-------------------- 178 (290)
T ss_dssp -----------------------------------------------------------T--------------------
T ss_pred -----------------------------------------------------------c--------------------
Confidence 0
Q ss_pred cCcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcC
Q 042063 386 KGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLG 465 (575)
Q Consensus 386 ~gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G 465 (575)
.||+||+|.+.|+.+++++|++.|+...| .++ |++ +| ..+| + .+|+++|
T Consensus 179 ----------------GAd~i~~e~~~~~~~~~~~i~~~~~~~vP--~i~-n~~-~~----~~~~------~-~eL~~lG 227 (290)
T 2hjp_A 179 ----------------GADAILIHSRQKTPDEILAFVKSWPGKVP--LVL-VPT-AY----PQLT------E-ADIAALS 227 (290)
T ss_dssp ----------------TCSEEEECCCCSSSHHHHHHHHHCCCSSC--EEE-CGG-GC----TTSC------H-HHHHTCT
T ss_pred ----------------CCcEEEeCCCCCCHHHHHHHHHHcCCCCC--EEE-ecc-CC----CCCC------H-HHHHhcC
Confidence 29999999989999999999999986677 344 776 34 2243 3 7899999
Q ss_pred -ceeeeecchhhhhhhhhHHHHHHHHHHhhHH
Q 042063 466 -FCWQFITLAGFHADALVVDTFAKDYARRGML 496 (575)
Q Consensus 466 -~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~ 496 (575)
|..++++++.+|....++.+.++.++++|-.
T Consensus 228 ~v~~v~~~~~~~raa~~a~~~~~~~i~~~g~~ 259 (290)
T 2hjp_A 228 KVGIVIYGNHAIRAAVGAVREVFARIRRDGGI 259 (290)
T ss_dssp TEEEEEECSHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred CeeEEEechHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999987744
No 13
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.5e-44 Score=368.97 Aligned_cols=242 Identities=19% Similarity=0.226 Sum_probs=213.7
Q ss_pred HHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHH
Q 042063 68 RTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDR 146 (575)
Q Consensus 68 ~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr 146 (575)
..|+++|++++++++||+||++||+++.+ ||++||+||+++|++ .+|+||.+.+|+++++..+++|++
T Consensus 11 ~~lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~----~lG~pD~~~vt~~em~~~~~~I~r------- 79 (287)
T 3b8i_A 11 AMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQ----VLAAPDFALITLSEFVEQATRIGR------- 79 (287)
T ss_dssp HHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHH----HHSCCSSSCSCHHHHHHHHHHHHT-------
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHH----hcCCCCCCCCCHHHHHHHHHHHHh-------
Confidence 34555666789999999999999998776 899999999999864 489999999999999999999975
Q ss_pred HHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHH
Q 042063 147 KQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISE 226 (575)
Q Consensus 147 ~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E 226 (575)
.++ +|||+|+|+|||++.|+.+++++|+++||+|||||||. .||||||+.|| |+|++|
T Consensus 80 ------------------~~~--~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~-~pKrcgh~~gk-l~~~~e 137 (287)
T 3b8i_A 80 ------------------VAR--LPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTL-LPAQFGRKSTD-LICVEE 137 (287)
T ss_dssp ------------------TCS--SCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBC-CSCCTTTCTTC-BCCHHH
T ss_pred ------------------cCC--CCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCC-CccccCCCCCC-ccCHHH
Confidence 366 89999999999999999999999999999999999998 69999999999 999999
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHH
Q 042063 227 HINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIED 306 (575)
Q Consensus 227 ~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~ 306 (575)
+++||+|++.+.+ +++|+|+||||+ ...+++++|+ |+++|.+
T Consensus 138 ~~~~I~aa~~a~~--~~~~~i~aRtda-a~~gl~~ai~-Ra~ay~e---------------------------------- 179 (287)
T 3b8i_A 138 GVGKIRAALEARV--DPALTIIARTNA-ELIDVDAVIQ-RTLAYQE---------------------------------- 179 (287)
T ss_dssp HHHHHHHHHHHCC--STTSEEEEEEET-TTSCHHHHHH-HHHHHHH----------------------------------
T ss_pred HHHHHHHHHHcCC--CCCcEEEEechh-hhcCHHHHHH-HHHHHHH----------------------------------
Confidence 9999999999875 689999999999 7788999999 9999963
Q ss_pred HHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCccccCCCCCCCCcccccc
Q 042063 307 NWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFK 386 (575)
Q Consensus 307 ~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~dwd~~Rt~eG~y~~~ 386 (575)
.|
T Consensus 180 ----------------------------------------------------------AG-------------------- 181 (287)
T 3b8i_A 180 ----------------------------------------------------------AG-------------------- 181 (287)
T ss_dssp ----------------------------------------------------------TT--------------------
T ss_pred ----------------------------------------------------------cC--------------------
Confidence 02
Q ss_pred CcHHHHHHHhhhcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCc
Q 042063 387 GSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGF 466 (575)
Q Consensus 387 gg~~~ai~R~~a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~ 466 (575)
||+||+|. .|+.+++++|++.++ .|-.++.|+.+|+|++ .+|+++||
T Consensus 182 ----------------Ad~i~~e~-~~~~~~~~~i~~~~~--~P~ii~~~g~~~~~~~--------------~eL~~lGv 228 (287)
T 3b8i_A 182 ----------------ADGICLVG-VRDFAHLEAIAEHLH--IPLMLVTYGNPQLRDD--------------ARLARLGV 228 (287)
T ss_dssp ----------------CSEEEEEC-CCSHHHHHHHHTTCC--SCEEEECTTCGGGCCH--------------HHHHHTTE
T ss_pred ----------------CCEEEecC-CCCHHHHHHHHHhCC--CCEEEeCCCCCCCCCH--------------HHHHHcCC
Confidence 99999996 799999999999996 7877777899999886 78999999
Q ss_pred eeeeecchhhhhhhhhHHHHHHHHHHhh
Q 042063 467 CWQFITLAGFHADALVVDTFAKDYARRG 494 (575)
Q Consensus 467 ~~Q~ItLaG~H~~~~~~~~la~~~~~~G 494 (575)
...++.+..+.....+ .++.++++|
T Consensus 229 ~~v~~~~~~~raa~~a---~~~~l~~~g 253 (287)
T 3b8i_A 229 RVVVNGHAAYFAAIKA---TYDCLREER 253 (287)
T ss_dssp EEEECCCHHHHHHHHH---HHHHHHHHH
T ss_pred cEEEEChHHHHHHHHH---HHHHHHHcC
Confidence 9999999888766555 455555544
No 14
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=100.00 E-value=9.7e-45 Score=372.39 Aligned_cols=177 Identities=28% Similarity=0.409 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHH
Q 042063 61 EMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFF 139 (575)
Q Consensus 61 ~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~ 139 (575)
..+++||++|++ ++.++++||+||++||+++++ ||++||+||++++++ .+|+||.+.+|+++++..+++|.+
T Consensus 4 ~~~~~Lr~ll~~---~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~----~~G~pD~~~vt~~em~~~~~~I~~ 76 (302)
T 3fa4_A 4 TAATSLRRALEN---PDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAAS----VHGQADLGICTLNDMRANAEMISN 76 (302)
T ss_dssp CHHHHHHHHHHS---TTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHH----HHSCCSSSCCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhC---CCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHH----HcCCCCCCcCCHHHHHHHHHHHHh
Confidence 468889988763 345899999999999998777 899999999999874 589999999999999999999974
Q ss_pred HhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCC
Q 042063 140 AQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGK 219 (575)
Q Consensus 140 aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk 219 (575)
+ ..+ +|||||+|+|||++.|+.++++.|+++||+|||||||+ +||||||++||
T Consensus 77 ~------------------------~~~--~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~-~~Krcgh~~gk 129 (302)
T 3fa4_A 77 I------------------------SPS--TPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQV-QTKRCGHLAGK 129 (302)
T ss_dssp T------------------------STT--SCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBC-CC-------CC
T ss_pred h------------------------ccC--CCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCC-CCcccCCCCCC
Confidence 2 235 99999999999999999999999999999999999998 69999999999
Q ss_pred cccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhh
Q 042063 220 VLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFIL 272 (575)
Q Consensus 220 ~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~ 272 (575)
+|+|++||++||+||+.+++.+++|||||||||++...+++++|+ |+++|++
T Consensus 130 ~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~-Ra~ay~e 181 (302)
T 3fa4_A 130 ILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVA-RLRAARD 181 (302)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHH-HHHHHHT
T ss_pred eecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHH-HHHHHHH
Confidence 999999999999999999988899999999999998889999999 9999984
No 15
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=100.00 E-value=3.9e-42 Score=349.29 Aligned_cols=244 Identities=20% Similarity=0.212 Sum_probs=209.9
Q ss_pred HHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHH
Q 042063 62 MAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFA 140 (575)
Q Consensus 62 ~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~a 140 (575)
.+++||+++ ++ + +++||+||++||+++.+ ||++||+|||++|+ .+|+||.+.+|+++++..+++|+++
T Consensus 6 ~~~~lr~l~----~~-~-i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~-----~~G~pD~~~vt~~em~~~~~~I~~~ 74 (275)
T 2ze3_A 6 HARSFHALH----QT-G-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAH-----ARGRTDGQTLTRDEMGREVEAIVRA 74 (275)
T ss_dssp HHHHHHHHH----HH-C-EEECEESSHHHHHHHHHHTCSCEEECHHHHHH-----HSCCCSSSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----hC-C-eeEecccCHHHHHHHHHcCCCEEEECcHHHHH-----hCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 455566544 33 4 99999999999998877 89999999999986 3899999999999999999999863
Q ss_pred hhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCC-CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCC
Q 042063 141 QQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFG-GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGK 219 (575)
Q Consensus 141 q~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfG-g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk 219 (575)
++ +|||+|+|+||| ++.|+++++++|+++||+|||||||.. | +||
T Consensus 75 -------------------------~~--~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~------~-~~k 120 (275)
T 2ze3_A 75 -------------------------VA--IPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATG------L-TPT 120 (275)
T ss_dssp -------------------------CS--SCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCS------S-SSS
T ss_pred -------------------------cC--CCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcC------C-CCC
Confidence 56 899999999999 689999999999999999999999983 4 689
Q ss_pred cccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccC-------chHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHH
Q 042063 220 VLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAAT-------LIQTNVDTRDHQFILGVTNPNLRGKALASILAEAM 292 (575)
Q Consensus 220 ~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~-------~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~ 292 (575)
+|+|++|+++||+|++.+++.+|+||+|+||||++..+ +++++|+ |+++|.
T Consensus 121 ~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~-Ra~ay~--------------------- 178 (275)
T 2ze3_A 121 ELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVR-RGQAYA--------------------- 178 (275)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHH-HHHHHH---------------------
T ss_pred ccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHH-HHHHHH---------------------
Confidence 99999999999999999998889999999999997643 3455555 555553
Q ss_pred HCCCCHHHHHHHHHHHHhcCCcccccHHHHHHHhccCCCchhhHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCcccc
Q 042063 293 AAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWD 372 (575)
Q Consensus 293 s~g~s~~ei~~~~~~W~~~~~l~tf~ea~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~r~~a~~~~~~~~~~d 372 (575)
T Consensus 179 -------------------------------------------------------------------------------- 178 (275)
T 2ze3_A 179 -------------------------------------------------------------------------------- 178 (275)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccccccCcHHHHHHHhhhcCC-cCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCH
Q 042063 373 WDLPRTREGFYRFKGSVDAAIIRGWAFAP-HADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTD 451 (575)
Q Consensus 373 wd~~Rt~eG~y~~~gg~~~ai~R~~a~ap-yaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~ 451 (575)
+ .||+||+|. .|+.+++++|++.|+ .| +.+|++|+ .+|
T Consensus 179 ----------------------------eAGAd~i~~e~-~~~~~~~~~i~~~~~--~P---~n~~~~~~------~~~- 217 (275)
T 2ze3_A 179 ----------------------------DAGADGIFVPL-ALQSQDIRALADALR--VP---LNVMAFPG------SPV- 217 (275)
T ss_dssp ----------------------------HTTCSEEECTT-CCCHHHHHHHHHHCS--SC---EEEECCTT------SCC-
T ss_pred ----------------------------HCCCCEEEECC-CCCHHHHHHHHHhcC--CC---EEEecCCC------CCC-
Confidence 3 599999999 699999999999996 45 67888873 133
Q ss_pred HHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHHHHHH
Q 042063 452 EEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAYVE 500 (575)
Q Consensus 452 ~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~aYv~ 500 (575)
+ .+|+++||..++++++.+|....++.+.++.++++| ...++
T Consensus 218 -----~-~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~g-~~~~~ 259 (275)
T 2ze3_A 218 -----P-RALLDAGAARVSFGQSLMLATLGLVQRMAAELHAAE-QSPLM 259 (275)
T ss_dssp -----H-HHHHHTTCSEEECTTHHHHHHHHHHHHHHHHHHHHS-CCHHH
T ss_pred -----H-HHHHHcCCcEEEEChHHHHHHHHHHHHHHHHHHHhC-Ccccc
Confidence 2 789999999999999999999999999999999999 65554
No 16
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.5e-35 Score=298.17 Aligned_cols=147 Identities=23% Similarity=0.340 Sum_probs=134.2
Q ss_pred HHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhH
Q 042063 67 WRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHD 145 (575)
Q Consensus 67 ~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hD 145 (575)
...|+++|++++++++||+||+.||+++.+ ||++||+|||++|+ .+|+||.+.+|+++++..+++|+++
T Consensus 9 ~~~lr~l~~~~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~-----~~G~pD~~~vt~~em~~~~~~I~r~----- 78 (255)
T 2qiw_A 9 ATKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVAD-----ATGSSDGENMNFADYMAVVKKITSA----- 78 (255)
T ss_dssp HHHHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHH-----HTTCCTTTCSCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHH-----hCCCCCCCCcCHHHHHHHHHHHHhc-----
Confidence 345666777889999999999999998776 89999999999986 3899999999999999999999863
Q ss_pred HHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHH
Q 042063 146 RKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAIS 225 (575)
Q Consensus 146 r~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~ 225 (575)
++ +|||+|+|+|||+.. .+++++|+++||+|||||||. |..||.|+|++
T Consensus 79 --------------------~~--~pviaD~~~Gyg~~~--~~~~~~l~~aGa~gv~iEd~~-------~~~~k~l~~~~ 127 (255)
T 2qiw_A 79 --------------------VS--IPVSVDVESGYGLSP--ADLIAQILEAGAVGINVEDVV-------HSEGKRVREAQ 127 (255)
T ss_dssp --------------------CS--SCEEEECTTCTTCCH--HHHHHHHHHTTCCEEEECSEE-------GGGTTEECCHH
T ss_pred --------------------CC--CCEEeccCCCcCcHH--HHHHHHHHHcCCcEEEECCCC-------CCCCCcccCHH
Confidence 56 999999999999876 999999999999999999997 56789999999
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEeeccc
Q 042063 226 EHINRLVAARLQFDVMGVETVLVARTDAE 254 (575)
Q Consensus 226 E~v~RL~AAR~a~d~~g~d~vIiARTDA~ 254 (575)
|+++||+|++.+++.+|+||+|+||||++
T Consensus 128 e~~~~I~a~~~a~~~~g~~~~v~aRtd~~ 156 (255)
T 2qiw_A 128 EHADYIAAARQAADVAGVDVVINGRTDAV 156 (255)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEEECHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEechh
Confidence 99999999999998889999999999985
No 17
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=99.87 E-value=1.9e-23 Score=211.92 Aligned_cols=178 Identities=13% Similarity=0.097 Sum_probs=136.0
Q ss_pred HHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHH
Q 042063 70 LKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQ 148 (575)
Q Consensus 70 L~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q 148 (575)
|++++++++++.+|++||+.+|+++.+ ||++| ++|-+++.. .+|+||...++++++...+++|.++
T Consensus 21 lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~i-lvGdSl~~~----~lG~~dt~~vtldem~~h~~aV~r~-------- 87 (275)
T 3vav_A 21 LQAMREAGEKIAMLTCYDASFAALLDRANVDVQ-LIGDSLGNV----LQGQTTTLPVTLDDIAYHTACVARA-------- 87 (275)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEE-EECTTHHHH----TTCCSSSTTCCHHHHHHHHHHHHHT--------
T ss_pred HHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEE-EECcHHHHH----HcCCCCCCccCHHHHHHHHHHHHhc--------
Confidence 555666789999999999999998766 89999 555455443 6999999999999999999999752
Q ss_pred HHHHhhccHhhhhcCCCCCCCCceeeeCCCC-CCCchHHHHHHHHHHHcCceEEEeccCCCcc------------cccCC
Q 042063 149 REARMSMSREERARTPCVDYLKPIIADGDTG-FGGTTATVKLCKLFVERGAAGVHIEDQSSVT------------KKCGH 215 (575)
Q Consensus 149 ~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtG-fGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~------------KkCGH 215 (575)
..+ +|||+|+|.| ||++.++.+++++|+++||+||+||||. .+ +.|||
T Consensus 88 ----------------~~~--~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~-~~~~~i~~l~~~GIpv~gH 148 (275)
T 3vav_A 88 ----------------QPR--ALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGE-WLAETVRFLVERAVPVCAH 148 (275)
T ss_dssp ----------------CCS--SEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCG-GGHHHHHHHHHTTCCEEEE
T ss_pred ----------------CCC--CCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCch-hHHHHHHHHHHCCCCEEEe
Confidence 223 8999999995 9999999999999999999999999997 46 99999
Q ss_pred CCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCC
Q 042063 216 MAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAG 295 (575)
Q Consensus 216 ~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g 295 (575)
++.+ |..+ + . + .+|.|++|||+.. ++.|+ |+++|.+ +|||+++. .+
T Consensus 149 lglt---Pq~~--------~--~--~-gg~~vqgrt~~~a----~~~i~-rA~a~~e----------AGA~~ivl---E~ 194 (275)
T 3vav_A 149 VGLT---PQSV--------H--A--F-GGFKVQGKTEAGA----AQLLR-DARAVEE----------AGAQLIVL---EA 194 (275)
T ss_dssp EESC---GGGH--------H--H--H-C---CCCCSHHHH----HHHHH-HHHHHHH----------HTCSEEEE---ES
T ss_pred cCCC---ceEE--------e--c--c-CCeEEEcCCHHHH----HHHHH-HHHHHHH----------cCCCEEEe---cC
Confidence 9854 4322 1 1 2 4799999999764 66777 9999984 56665543 35
Q ss_pred CCHHHHHHHHHHHHhcCCcc
Q 042063 296 KTGAELQAIEDNWIAMAGLK 315 (575)
Q Consensus 296 ~s~~ei~~~~~~W~~~~~l~ 315 (575)
...+++.++.++. +.|++
T Consensus 195 vp~~~a~~It~~l--~iP~i 212 (275)
T 3vav_A 195 VPTLVAAEVTREL--SIPTI 212 (275)
T ss_dssp CCHHHHHHHHHHC--SSCEE
T ss_pred CCHHHHHHHHHhC--CCCEE
Confidence 5545566665553 35555
No 18
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=99.81 E-value=2.9e-20 Score=187.73 Aligned_cols=174 Identities=13% Similarity=0.044 Sum_probs=133.3
Q ss_pred HHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHH
Q 042063 70 LKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQ 148 (575)
Q Consensus 70 L~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q 148 (575)
|++++++++++.+|++||+.+|+++.+ ||++|+++. +++.+ .+|+||...++++++...+++|.++
T Consensus 9 lr~~k~~g~~i~~~tayD~~sA~l~e~aG~d~ilvGd-sl~~~----~lG~~dt~~vtldemi~h~~aV~r~-------- 75 (264)
T 1m3u_A 9 LQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGD-SLGMT----VQGHDSTLPVTVADIAYHTAAVRRG-------- 75 (264)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHHHTCCEEEECT-THHHH----TTCCSSSTTCCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECH-HHHHH----HcCCCCCCCcCHHHHHHHHHHHHhh--------
Confidence 555666789999999999999998776 899999954 44443 6999999999999999999999763
Q ss_pred HHHHhhccHhhhhcCCCCCCCCceeeeCCCCCC---CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHH
Q 042063 149 REARMSMSREERARTPCVDYLKPIIADGDTGFG---GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAIS 225 (575)
Q Consensus 149 ~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfG---g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~ 225 (575)
++ ..||++| ++|| ++.++.+++++|+++||+||+|||+.
T Consensus 76 -----------------~~-~~~vvaD--~pfgsy~~~~~a~~~a~rl~kaGa~aVklEgg~------------------ 117 (264)
T 1m3u_A 76 -----------------AP-NCLLLAD--LPFMAYATPEQAFENAATVMRAGANMVKIEGGE------------------ 117 (264)
T ss_dssp -----------------CT-TSEEEEE--CCTTSSSSHHHHHHHHHHHHHTTCSEEECCCSG------------------
T ss_pred -----------------CC-CCcEEEE--CCCCCcCCHHHHHHHHHHHHHcCCCEEEECCcH------------------
Confidence 33 1456655 6666 77888899999999999999999982
Q ss_pred HHHHHHHHHHHhh--------------hhcCCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHH
Q 042063 226 EHINRLVAARLQF--------------DVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEA 291 (575)
Q Consensus 226 E~v~RL~AAR~a~--------------d~~g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~ 291 (575)
|+++||+++..+. ..+ .+|.|++|||+.. ++.|+ |+++|.+ +|||+++.
T Consensus 118 e~~~~I~al~~agipV~gHiGLtPq~v~~~-ggf~v~grt~~~a----~~~i~-rA~a~~e----------AGA~~ivl- 180 (264)
T 1m3u_A 118 WLVETVQMLTERAVPVCGHLGLTPQSVNIF-GGYKVQGRGDEAG----DQLLS-DALALEA----------AGAQLLVL- 180 (264)
T ss_dssp GGHHHHHHHHHTTCCEEEEEESCGGGHHHH-TSSCCCCCSHHHH----HHHHH-HHHHHHH----------HTCCEEEE-
T ss_pred HHHHHHHHHHHCCCCeEeeecCCceeeccc-CCeEEEeCCHHHH----HHHHH-HHHHHHH----------CCCcEEEE-
Confidence 7889999998652 111 3678999999864 66777 9999985 56665543
Q ss_pred HHCCCCHHHHHHHHHHHHhcCCcc
Q 042063 292 MAAGKTGAELQAIEDNWIAMAGLK 315 (575)
Q Consensus 292 ~s~g~s~~ei~~~~~~W~~~~~l~ 315 (575)
.+...+...++.+++. .|++
T Consensus 181 --E~vp~~~a~~it~~l~--iP~i 200 (264)
T 1m3u_A 181 --ECVPVELAKRITEALA--IPVI 200 (264)
T ss_dssp --ESCCHHHHHHHHHHCS--SCEE
T ss_pred --ecCCHHHHHHHHHhCC--CCEE
Confidence 3455566666776653 5655
No 19
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=99.78 E-value=4e-19 Score=180.28 Aligned_cols=174 Identities=11% Similarity=0.042 Sum_probs=122.8
Q ss_pred HHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHH
Q 042063 70 LKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQ 148 (575)
Q Consensus 70 L~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q 148 (575)
|++++++++++.+|+|||+.+|+++.+ ||++|+++. +++.+ .+|+||...++++++...+++|.++
T Consensus 9 lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGd-Sl~~~----~lG~~dt~~vTldemi~h~~aV~r~-------- 75 (275)
T 1o66_A 9 LQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGD-SLGMA----VQGRKSTLPVSLRDMCYHTECVARG-------- 75 (275)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEECT-THHHH----TTCCSSSTTCCHHHHHHHHHHHHHH--------
T ss_pred HHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECH-HHHHH----HcCCCCCCCCCHHHHHHHHHHHHhh--------
Confidence 555666789999999999999998776 899998754 44432 6999999999999999999999763
Q ss_pred HHHHhhccHhhhhcCCCCCCCCceeeeCCCCCC----CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCH
Q 042063 149 REARMSMSREERARTPCVDYLKPIIADGDTGFG----GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAI 224 (575)
Q Consensus 149 ~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfG----g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~ 224 (575)
++ ..||++| ++|| ++..+.+++++|+++||+||+|||+
T Consensus 76 -----------------~~-~~~vvaD--~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg------------------ 117 (275)
T 1o66_A 76 -----------------AK-NAMIVSD--LPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG------------------ 117 (275)
T ss_dssp -----------------CS-SSEEEEE--CCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS------------------
T ss_pred -----------------CC-CCeEEEE--CCCCCccCCHHHHHHHHHHHHHcCCcEEEECCc------------------
Confidence 33 1456655 6665 3677888899999999999999998
Q ss_pred HHHHHHHHHHHHhh-hhc------------CCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHH
Q 042063 225 SEHINRLVAARLQF-DVM------------GVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEA 291 (575)
Q Consensus 225 ~E~v~RL~AAR~a~-d~~------------g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~ 291 (575)
+|+++||++++.+. .+| -.+|.|++|| +. .++.|+ |+++|.+ +|||+++.
T Consensus 118 ~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt-~~----a~~~i~-rA~a~~e----------AGA~~ivl- 180 (275)
T 1o66_A 118 VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRG-GK----AQALLN-DAKAHDD----------AGAAVVLM- 180 (275)
T ss_dssp GGGHHHHHHHHHTTCCEEEEEESCGGGTTC------------C----HHHHHH-HHHHHHH----------TTCSEEEE-
T ss_pred HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeCh-HH----HHHHHH-HHHHHHH----------cCCcEEEE-
Confidence 28899999998652 011 1357899999 43 277777 9999985 56665543
Q ss_pred HHCCCCHHHHHHHHHHHHhcCCcc
Q 042063 292 MAAGKTGAELQAIEDNWIAMAGLK 315 (575)
Q Consensus 292 ~s~g~s~~ei~~~~~~W~~~~~l~ 315 (575)
.+...+.+.++.+++. .|++
T Consensus 181 --E~vp~~~a~~it~~l~--iP~i 200 (275)
T 1o66_A 181 --ECVLAELAKKVTETVS--CPTI 200 (275)
T ss_dssp --ESCCHHHHHHHHHHCS--SCEE
T ss_pred --ecCCHHHHHHHHHhCC--CCEE
Confidence 3555566777777663 5665
No 20
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=99.77 E-value=5.4e-19 Score=179.87 Aligned_cols=174 Identities=15% Similarity=0.116 Sum_probs=122.7
Q ss_pred HHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHH
Q 042063 70 LKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQ 148 (575)
Q Consensus 70 L~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q 148 (575)
|++++++++++.+|++||+.+|+++.+ ||++|+++. +++.+ .+|+||...++++++...+++|.++
T Consensus 26 lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGd-Sl~~~----~lG~~dt~~vTldemi~h~~aV~r~-------- 92 (281)
T 1oy0_A 26 LQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGD-SAANV----VYGYDTTVPISIDELIPLVRGVVRG-------- 92 (281)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEECT-THHHH----TTCCSSSSSCCGGGTHHHHHHHHHH--------
T ss_pred HHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECH-HHHHH----HcCCCCCCCCCHHHHHHHHHHHHhc--------
Confidence 555556789999999999999998776 899998754 44433 6999999999999999999999763
Q ss_pred HHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCC----chHHHHHHHHHH-HcCceEEEeccCCCcccccCCCCCCcccC
Q 042063 149 REARMSMSREERARTPCVDYLKPIIADGDTGFGG----TTATVKLCKLFV-ERGAAGVHIEDQSSVTKKCGHMAGKVLVA 223 (575)
Q Consensus 149 ~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg----~~nv~~lvk~~i-eAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp 223 (575)
++ .|+|+ +|++||+ +..+.+++.+++ |+||+||+|||+
T Consensus 93 -----------------~~--~~~vv-aD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg----------------- 135 (281)
T 1oy0_A 93 -----------------AP--HALVV-ADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGG----------------- 135 (281)
T ss_dssp -----------------CT--TSEEE-EECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBS-----------------
T ss_pred -----------------CC--CCeEE-EECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCc-----------------
Confidence 34 56666 7777764 566667555555 599999999998
Q ss_pred HHHHHHHHHHHHHhh-hhc------------CCceEEEEeecccccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHH
Q 042063 224 ISEHINRLVAARLQF-DVM------------GVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAE 290 (575)
Q Consensus 224 ~~E~v~RL~AAR~a~-d~~------------g~d~vIiARTDA~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~ 290 (575)
+|+++||++++.+. .+| -.+|.|++||| .. ++.|+ |+++|.+ +|||+++.
T Consensus 136 -~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~-~a----~~~i~-rA~a~~e----------AGA~~ivl 198 (281)
T 1oy0_A 136 -ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGD-AA----EQTIA-DAIAVAE----------AGAFAVVM 198 (281)
T ss_dssp -GGGHHHHHHHHHHTCCEEEEEECCC--------------CH-HH----HHHHH-HHHHHHH----------HTCSEEEE
T ss_pred -HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcH-HH----HHHHH-HHHHHHH----------cCCcEEEE
Confidence 27899999998652 011 13578999999 43 67777 9999985 56665543
Q ss_pred HHHCCCCHHHHHHHHHHHHhcCCcc
Q 042063 291 AMAAGKTGAELQAIEDNWIAMAGLK 315 (575)
Q Consensus 291 ~~s~g~s~~ei~~~~~~W~~~~~l~ 315 (575)
.+...+.+.++.+++. .|++
T Consensus 199 ---E~vp~~~a~~it~~l~--iP~i 218 (281)
T 1oy0_A 199 ---EMVPAELATQITGKLT--IPTV 218 (281)
T ss_dssp ---ESCCHHHHHHHHHHCS--SCEE
T ss_pred ---ecCCHHHHHHHHHhCC--CCEE
Confidence 3455566667777663 5655
No 21
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=90.81 E-value=1.3 Score=44.76 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=54.8
Q ss_pred HHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHH
Q 042063 188 KLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRD 267 (575)
Q Consensus 188 ~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~ 267 (575)
-.++.+.++|+..|-+-|.+ +.-..||-+ ...++.+|++...++.+.+.+ ..+|++=+.--.....+.+++ -+
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl-~~~~lG~~d-t~~vtldemi~h~~aV~r~~~----~~~vvaD~pfgsy~~~~~a~~-~a 100 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSL-GMTVQGHDS-TLPVTVADIAYHTAAVRRGAP----NCLLLADLPFMAYATPEQAFE-NA 100 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTH-HHHTTCCSS-STTCCHHHHHHHHHHHHHHCT----TSEEEEECCTTSSSSHHHHHH-HH
T ss_pred HHHHHHHHcCCCEEEECHHH-HHHHcCCCC-CCCcCHHHHHHHHHHHHhhCC----CCcEEEECCCCCcCCHHHHHH-HH
Confidence 45788999999999999987 444566654 367899999999999886542 234555444322224555665 55
Q ss_pred Hhhh-hccCCC
Q 042063 268 HQFI-LGVTNP 277 (575)
Q Consensus 268 ~aYi-~Gat~~ 277 (575)
..++ .|+...
T Consensus 101 ~rl~kaGa~aV 111 (264)
T 1m3u_A 101 ATVMRAGANMV 111 (264)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHcCCCEE
Confidence 5666 444433
No 22
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=88.69 E-value=4.5 Score=41.08 Aligned_cols=82 Identities=10% Similarity=0.080 Sum_probs=53.3
Q ss_pred HHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeeccccc-CchHHHHHHH
Q 042063 188 KLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAA-TLIQTNVDTR 266 (575)
Q Consensus 188 ~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a-~~l~~aId~R 266 (575)
-.++.+.++|+..|-.-|.+ +.-..||-+ ...++.+|++...++++.+. +..+|++=+---.. ...+.+++ -
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl-~~~~lG~~d-t~~vTldemi~h~~aV~r~~----~~~~vvaD~pfgsy~~s~~~a~~-n 100 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSL-GMAVQGRKS-TLPVSLRDMCYHTECVARGA----KNAMIVSDLPFGAYQQSKEQAFA-A 100 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTH-HHHTTCCSS-STTCCHHHHHHHHHHHHHHC----SSSEEEEECCTTSSSSCHHHHHH-H
T ss_pred HHHHHHHHcCCCEEEECHHH-HHHHcCCCC-CCCCCHHHHHHHHHHHHhhC----CCCeEEEECCCCCccCCHHHHHH-H
Confidence 45788999999999998887 444556644 36789999999999998654 22355543332121 13555665 5
Q ss_pred HHhhh-hccCC
Q 042063 267 DHQFI-LGVTN 276 (575)
Q Consensus 267 ~~aYi-~Gat~ 276 (575)
+..++ .|+..
T Consensus 101 a~rl~kaGa~a 111 (275)
T 1o66_A 101 AAELMAAGAHM 111 (275)
T ss_dssp HHHHHHTTCSE
T ss_pred HHHHHHcCCcE
Confidence 55566 44443
No 23
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=87.83 E-value=1.3 Score=45.31 Aligned_cols=106 Identities=19% Similarity=0.155 Sum_probs=72.4
Q ss_pred HHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-c--CCeEeechHHHhhccCCCCCCCCC-CCCCCcCcHHHHHHHHHH
Q 042063 64 KKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-H--LDSIYVSGWQCSSTHTSTNEPGPD-LADYPYDTVPNKVEHLFF 139 (575)
Q Consensus 64 ~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-g--f~AIy~SG~~vAa~~~~~~~g~PD-~~~~p~~tv~~~v~rI~~ 139 (575)
+.+.+.|++..++++|++--|+..++||+..++ | |=.+|-||--=.+ |.+- .+++||..-=+.|-.+.+
T Consensus 14 ~~il~~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~-------G~~slag~lpygnaN~iv~e~~~ 86 (286)
T 2p10_A 14 SELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMA-------GRGSLAGLLAYGNANQIVVDMAR 86 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHT-------TCCGGGGGBTEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchhhhc-------CccchhhhccccCHHHHHHHHHH
Confidence 345566777778899999999999999997776 4 5577877754333 1222 256888876666666642
Q ss_pred HhhhhHHHHHHHHhhccHhhhhcCCCC-CCCCceeeeCCCCCCCc-hHHHHHHHHHHHcCceEE
Q 042063 140 AQQYHDRKQREARMSMSREERARTPCV-DYLKPIIADGDTGFGGT-TATVKLCKLFVERGAAGV 201 (575)
Q Consensus 140 aq~~hDr~q~~~r~~~~~e~~~~~~~v-d~~lPIIAD~DtGfGg~-~nv~~lvk~~ieAGaAGI 201 (575)
+ ..|.+ + +||+|=.|.- +| .++-+..+.+.++|++||
T Consensus 87 -----------e----------vlp~v~~--iPV~Agv~~~--DP~~~~g~~Le~lk~~Gf~Gv 125 (286)
T 2p10_A 87 -----------E----------VLPVVRH--TPVLAGVNGT--DPFMVMSTFLRELKEIGFAGV 125 (286)
T ss_dssp -----------H----------HGGGCSS--SCEEEEECTT--CTTCCHHHHHHHHHHHTCCEE
T ss_pred -----------h----------hhccCCC--CCEEEEECCc--CCCcCHHHHHHHHHHhCCceE
Confidence 0 01334 5 9999875543 22 245666699999999999
No 24
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=86.35 E-value=1.6 Score=45.67 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=25.2
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeechH
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSGW 106 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~ 106 (575)
+.|+++-|+.++-.|+...+ |.++|.+|+.
T Consensus 217 ~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~ 247 (352)
T 3sgz_A 217 RLPIILKGILTKEDAELAMKHNVQGIVVSNH 247 (352)
T ss_dssp CSCEEEEEECSHHHHHHHHHTTCSEEEECCG
T ss_pred CCCEEEEecCcHHHHHHHHHcCCCEEEEeCC
Confidence 67999999988888876665 8999999984
No 25
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=84.83 E-value=4.2 Score=41.11 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=67.9
Q ss_pred CCceeec-CCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhh
Q 042063 77 GTASRTF-GALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMS 154 (575)
Q Consensus 77 ~~~l~~~-Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~ 154 (575)
.++.++| .+-|+..|+.+++ |-.+|.--|.-+.+ +.|. .+ ++.++.|..
T Consensus 134 ~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGs-----G~Gi--------~~-~~lI~~I~e--------------- 184 (265)
T 1wv2_A 134 DGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGS-----GLGI--------CN-PYNLRIILE--------------- 184 (265)
T ss_dssp TTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTC-----CCCC--------SC-HHHHHHHHH---------------
T ss_pred CCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCC-----CCCc--------CC-HHHHHHHHh---------------
Confidence 4567775 8888999887776 78888654433322 2222 22 566666642
Q ss_pred ccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHH
Q 042063 155 MSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAA 234 (575)
Q Consensus 155 ~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AA 234 (575)
..+ +|||+ |.|.|.+.. ++...+.||.||-+-=-. |..+.+..=...|+.-++|-
T Consensus 185 ----------~~~--vPVI~--eGGI~TPsD----Aa~AmeLGAdgVlVgSAI-------~~a~dP~~ma~af~~Av~aG 239 (265)
T 1wv2_A 185 ----------EAK--VPVLV--DAGVGTASD----AAIAMELGCEAVLMNTAI-------AHAKDPVMMAEAMKHAIVAG 239 (265)
T ss_dssp ----------HCS--SCBEE--ESCCCSHHH----HHHHHHHTCSEEEESHHH-------HTSSSHHHHHHHHHHHHHHH
T ss_pred ----------cCC--CCEEE--eCCCCCHHH----HHHHHHcCCCEEEEChHH-------hCCCCHHHHHHHHHHHHHHH
Confidence 145 99999 567777754 455667799999864332 11222333356777777787
Q ss_pred HHhhh
Q 042063 235 RLQFD 239 (575)
Q Consensus 235 R~a~d 239 (575)
|.+..
T Consensus 240 r~a~~ 244 (265)
T 1wv2_A 240 RLAYL 244 (265)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 26
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=83.36 E-value=3.6 Score=41.10 Aligned_cols=162 Identities=14% Similarity=0.125 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCCCC---CCC-CcCcHH
Q 042063 61 EMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGPDL---ADY-PYDTVP 131 (575)
Q Consensus 61 ~~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~PD~---~~~-p~~tv~ 131 (575)
.+-+.|++..++ -+..++-.++|+-++..+++..+.+.+.+..+-.. +. ..+.|=. +.- +++++.
T Consensus 74 egl~~l~~~~~~----~Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a--~~~kPV~lk~G~~~t~~e~~ 147 (262)
T 1zco_A 74 KALRWMREAADE----YGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVG--KVENPVLLKRGMGNTIQELL 147 (262)
T ss_dssp HHHHHHHHHHHH----HTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHT--TSSSCEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHH----cCCcEEEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHH--hcCCcEEEecCCCCCHHHHH
Confidence 344444444443 35666778888888765655577777777655431 11 2344422 332 556666
Q ss_pred HHHHHHHHH-----hhhh----HHHHHHHHh--hcc--HhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCc
Q 042063 132 NKVEHLFFA-----QQYH----DRKQREARM--SMS--REERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGA 198 (575)
Q Consensus 132 ~~v~rI~~a-----q~~h----Dr~q~~~r~--~~~--~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGa 198 (575)
+.++.|... -++| .-... .+. .+. +..+ ... .+|||+|.+.+-|...-+..+++.-+..||
T Consensus 148 ~Av~~i~~~Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~~lk---~~~--~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga 221 (262)
T 1zco_A 148 YSAEYIMAQGNENVILCERGIRTFETA-TRFTLDISAVPVVK---ELS--HLPIIVDPSHPAGRRSLVIPLAKAAYAIGA 221 (262)
T ss_dssp HHHHHHHTTTCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHH---HHB--SSCEEECSSTTTCSGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCeEEEEECCCCCCCCc-ChhhcCHHHHHHHH---hhh--CCCEEEEcCCCCCccchHHHHHHHHHHcCC
Confidence 666555321 0001 00000 000 000 0000 011 389999999997766556677888899999
Q ss_pred eEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHH
Q 042063 199 AGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARL 236 (575)
Q Consensus 199 AGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~ 236 (575)
.||-||=-. .|.|--- +|+.-++++|+-.-++..|.
T Consensus 222 ~Gl~iE~H~-~~d~al~-D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 222 DGIMVEVHP-EPEKALS-DSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp SEEEEEBCS-SGGGCSS-CTTTCBCHHHHHHHHHHHHH
T ss_pred CEEEEEecC-CccccCC-hhhcCCCHHHHHHHHHHHHH
Confidence 999999764 2333222 67777788888877777764
No 27
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=81.26 E-value=6.7 Score=39.76 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=58.6
Q ss_pred HHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHHHHHHHH
Q 042063 188 KLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRD 267 (575)
Q Consensus 188 ~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~aId~R~ 267 (575)
-.++.+.++|+..|-.-|.+ +.-..||-++ ..++.+|++...++++.+. ++.+||+=-|.-.-...+++++ -.
T Consensus 40 ~sA~l~e~aG~d~ilvGdSl-~~~~lG~~dt-~~vtldem~~h~~aV~r~~----~~~~vvaD~pfgsY~s~~~a~~-~a 112 (275)
T 3vav_A 40 SFAALLDRANVDVQLIGDSL-GNVLQGQTTT-LPVTLDDIAYHTACVARAQ----PRALIVADLPFGTYGTPADAFA-SA 112 (275)
T ss_dssp HHHHHHHHTTCSEEEECTTH-HHHTTCCSSS-TTCCHHHHHHHHHHHHHTC----CSSEEEEECCTTSCSSHHHHHH-HH
T ss_pred HHHHHHHHcCCCEEEECcHH-HHHHcCCCCC-CccCHHHHHHHHHHHHhcC----CCCCEEEecCCCCCCCHHHHHH-HH
Confidence 45788999999999999987 4556666543 5789999999999998643 3467887776521245556665 55
Q ss_pred Hhhh-hccCCCCC
Q 042063 268 HQFI-LGVTNPNL 279 (575)
Q Consensus 268 ~aYi-~Gat~~~~ 279 (575)
..++ +|+...++
T Consensus 113 ~rl~kaGa~aVkl 125 (275)
T 3vav_A 113 VKLMRAGAQMVKF 125 (275)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 5565 45544333
No 28
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=80.21 E-value=2.3 Score=44.58 Aligned_cols=160 Identities=17% Similarity=0.155 Sum_probs=94.3
Q ss_pred HHhhhhCCCceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCCCC---CCC-CcCcHHHHHHHHHHH
Q 042063 70 LKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGPDL---ADY-PYDTVPNKVEHLFFA 140 (575)
Q Consensus 70 L~~~~~~~~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~PD~---~~~-p~~tv~~~v~rI~~a 140 (575)
|++..++-+..++-.++|+-++..+++..+.+.+.+..+-.. ++ ..+.|=. +.- +++++...++.|..+
T Consensus 162 l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~lkIgAr~~~n~~LL~~va--~~~kPVilk~G~~~tl~ei~~Ave~i~~~ 239 (350)
T 1vr6_A 162 LREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAG--SYNKPVLLKRGFMNTIEEFLLSAEYIANS 239 (350)
T ss_dssp HHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHH--TTCSCEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHH--ccCCcEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 333333335666668888888776665677777777655321 11 2334422 332 566777777766431
Q ss_pred hhhhHHHHHHHHhhccHhhhhcC-------CCCC----------CCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEe
Q 042063 141 QQYHDRKQREARMSMSREERART-------PCVD----------YLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 141 q~~hDr~q~~~r~~~~~e~~~~~-------~~vd----------~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
= + ..+-+. +|... ..+| +.+||++|.+.+-|...-+..+...-+.+||.|+-|
T Consensus 240 G-------N-~~viLc--eRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~I 309 (350)
T 1vr6_A 240 G-------N-TKIILC--ERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIV 309 (350)
T ss_dssp T-------C-CCEEEE--ECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEE
T ss_pred C-------C-CeEEEE--eCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEE
Confidence 0 0 000010 00000 0001 138999999999887666667777778899999999
Q ss_pred ccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCC
Q 042063 204 EDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGV 243 (575)
Q Consensus 204 EDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~ 243 (575)
|=-. .|.|-- .+|+.-++++++-.-++..|.....+|.
T Consensus 310 E~H~-~pd~al-~D~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 310 EVHP-EPEKAL-SDGKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp EBCS-CGGGCS-SCGGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred EecC-CcccCC-CchhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 9654 232221 1677777888888777777766666664
No 29
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=79.11 E-value=3.9 Score=41.28 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=72.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.+ |...-||+=| ++....+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v---------~GttGE~~~Ls~~Er~~v~~~~~~~~~--g~rvpviaGv---g~~~t~~ 91 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVP---------VGTTGESATLTHEEHRTCIEIAVETCK--GTKVKVLAGA---GSNATHE 91 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEC---------SSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC--CCCCeEEEeC---CCCCHHH
Confidence 5678899999999999999976 455555577889999888888887653 2156666655 3345778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. ++. ..+ ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 92 ai~-la~~a~~~Gada-----------vlv-~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 142 (301)
T 3m5v_A 92 AVG-LAKFAKEHGADG-----------ILS-VAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNV 142 (301)
T ss_dssp HHH-HHHHHHHTTCSE-----------EEE-ECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCE-----------EEE-cCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 888 555443 55432 211 011 1355666666565555 578888773
No 30
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=79.02 E-value=3.3 Score=41.49 Aligned_cols=106 Identities=8% Similarity=0.040 Sum_probs=70.4
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.. | ||+=|= +....+
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v---------~GttGE~~~Ls~~Er~~v~~~~~~~~~--g----vi~Gvg---~~~t~~ 78 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFV---------AGTTGLGPALSLQEKMELTDAATSAAR--R----VIVQVA---SLNADE 78 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE---------TSTTTTGGGSCHHHHHHHHHHHHHHCS--S----EEEECC---CSSHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC--C----EEEeeC---CCCHHH
Confidence 5677899999999999999976 455555577899999988888886653 3 556553 345777
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... +..+.+++.+.-++-.+ ..|++.|+-
T Consensus 79 ai~-la~~A~~~Gadavlv~~P~y~-------------~~~s~~~l~~~f~~va~a~~lPiilYn~ 130 (286)
T 2r91_A 79 AIA-LAKYAESRGAEAVASLPPYYF-------------PRLSERQIAKYFRDLCSAVSIPVFLYNY 130 (286)
T ss_dssp HHH-HHHHHHHTTCSEEEECCSCSS-------------TTCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEEcCCcCC-------------CCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 555443 55432 2221 10356666666555555 478888874
No 31
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=78.90 E-value=3.9 Score=41.49 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=72.6
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..|--...+.+|..+-+++++.+. +...-||+=+ ++....+
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~---------GttGE~~~Lt~~Er~~v~~~~~~~~---~grvpviaGv---g~~~t~~ 98 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVS---------GTTGESPTTTDGEKIELLRAVLEAV---GDRARVIAGA---GTYDTAH 98 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEES---------STTTTGGGSCHHHHHHHHHHHHHHH---TTTSEEEEEC---CCSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC---------ccccchhhCCHHHHHHHHHHHHHHh---CCCCeEEEeC---CCCCHHH
Confidence 56788999999999999999763 4444556788999988888888665 3455566655 3345788
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. ++. ..+ ..+.+++.++-++-.+ ..||+.|+-
T Consensus 99 ai~-la~~a~~~Gada-----------vlv-~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 149 (304)
T 3l21_A 99 SIR-LAKACAAEGAHG-----------LLV-VTPYYSKPPQRGLQAHFTAVADATELPMLLYDI 149 (304)
T ss_dssp HHH-HHHHHHHHTCSE-----------EEE-ECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCE-----------EEE-CCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 888 555443 55532 211 001 1355667666666655 578888763
No 32
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=78.54 E-value=3.4 Score=41.66 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=71.3
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.. ...-||+=+ .+....+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGv---g~~~t~~ 90 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVA---------VGTTGESATLSVEEHTAVIEAVVKHVA---KRVPVIAGT---GANNTVE 90 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe---------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEeC---CCcCHHH
Confidence 5678899999999999999986 444455577889999888888876653 345455544 3345778
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.++-++-.+ ..|++.|+-
T Consensus 91 ai~-la~~a~~~Gadavlv~~P~y~--------------~~~~~~l~~~f~~va~a~~lPiilYn~ 141 (297)
T 3flu_A 91 AIA-LSQAAEKAGADYTLSVVPYYN--------------KPSQEGIYQHFKTIAEATSIPMIIYNV 141 (297)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 888 555443 55532 2221 1355666665555555 578888764
No 33
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=78.45 E-value=4.3 Score=41.72 Aligned_cols=108 Identities=15% Similarity=0.025 Sum_probs=71.2
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.. ...-||+=|= +....+
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg---~~st~e 117 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGI---------LGSTGIYMYLTREERRRAIEAAATILR---GRRTLMAGIG---ALRTDE 117 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEEC---CSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecC---CCCHHH
Confidence 5677899999999999999976 444455567889999988888886653 3555666443 345777
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. |... ..+.+++.+.-++-.+ ..||+.|+-
T Consensus 118 ai~-la~~A~~~Gadavlv~~P~Y~--------------~~s~~~l~~~f~~VA~a~~lPiilYn~ 168 (332)
T 2r8w_A 118 AVA-LAKDAEAAGADALLLAPVSYT--------------PLTQEEAYHHFAAVAGATALPLAIYNN 168 (332)
T ss_dssp HHH-HHHHHHHHTCSEEEECCCCSS--------------CCCHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 55544 355532 2221 1355666665555555 478888773
No 34
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=78.42 E-value=5.6 Score=41.48 Aligned_cols=31 Identities=26% Similarity=0.281 Sum_probs=25.3
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeechHH
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSGWQ 107 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~ 107 (575)
+.|+++-|+.++-.|+.+.+ |.++|.+|+.+
T Consensus 229 ~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~g 260 (368)
T 2nli_A 229 GLPVFVKGIQHPEDADMAIKRGASGIWVSNHG 260 (368)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECCGG
T ss_pred CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCC
Confidence 56888889988888876665 89999998864
No 35
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=78.31 E-value=5.6 Score=42.21 Aligned_cols=39 Identities=18% Similarity=0.144 Sum_probs=26.4
Q ss_pred HHHHHHhhhhC-CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 66 LWRTLKTHQAN-GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 66 L~~lL~~~~~~-~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
+.+.++...+. +.+++..++.++-.|+.+.+ |.++|-++
T Consensus 172 ~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 172 IIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEe
Confidence 33444444333 56666678999888887665 89999883
No 36
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=78.14 E-value=4.1 Score=40.93 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=71.5
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.+ ...-||+=|=+ ....+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~---~~t~~ 83 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILV---------CGTTGESPTLTFEEHEKVIEFAVKRAA---GRIKVIAGTGG---NATHE 83 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCC---CCHHH
Confidence 5677899999999999999976 455555567899999988888886653 34556665533 45677
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 84 ai~-la~~A~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~va~a~~lPiilYn~ 134 (294)
T 2ehh_A 84 AVH-LTAHAKEVGADGALVVVPYYN--------------KPTQRGLYEHFKTVAQEVDIPIIIYNI 134 (294)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 555443 55432 2221 1355666666555555 478888773
No 37
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=77.84 E-value=5.3 Score=42.09 Aligned_cols=42 Identities=21% Similarity=0.218 Sum_probs=29.3
Q ss_pred HHHHHHhhhh-CCCceeecCCCCHHHHHHHHc-cCCeEeechHH
Q 042063 66 LWRTLKTHQA-NGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQ 107 (575)
Q Consensus 66 L~~lL~~~~~-~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~ 107 (575)
.|+.++.+.+ -+.|+++-|+.++-.|+.+.+ |.++|.+|+.+
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~g 283 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHG 283 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCC
Confidence 3444554433 256888888888888876665 89999998754
No 38
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=77.62 E-value=3.4 Score=43.38 Aligned_cols=108 Identities=19% Similarity=0.199 Sum_probs=72.0
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+. +...-||+=| ++....+
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v---------~GTTGE~~~Ls~eEr~~vi~~~ve~~---~grvpViaGv---g~~st~e 142 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIV---------GGTTGEGQLMSWDEHIMLIGHTVNCF---GGSIKVIGNT---GSNSTRE 142 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHH---TTTSEEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe---------cccccChhhCCHHHHHHHHHHHHHHh---CCCCeEEEec---CCCCHHH
Confidence 5678899999999999999976 34445557788999888888887654 3455566655 3346778
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcccccH
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. |... ..+.+++.+.-++-.+..|++.|+-
T Consensus 143 ai~-la~~A~~~Gadavlvv~PyY~--------------k~sq~gl~~hf~~IA~a~PiilYNi 191 (360)
T 4dpp_A 143 AIH-ATEQGFAVGMHAALHINPYYG--------------KTSIEGLIAHFQSVLHMGPTIIYNV 191 (360)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHTTGGGSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCEEEEcCCCCC--------------CCCHHHHHHHHHHHHHhCCEEEEeC
Confidence 887 55444 355422 2221 1355666666665555679998873
No 39
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=77.55 E-value=5.2 Score=41.85 Aligned_cols=41 Identities=7% Similarity=0.024 Sum_probs=28.1
Q ss_pred HHHHHHHHhhhhC--CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 64 KKLWRTLKTHQAN--GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 64 ~kL~~lL~~~~~~--~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
+.+++.++...+. +-|+++.++.++-.|..+.+ |.++|-++
T Consensus 179 ~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 179 TRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEEC
Confidence 3455555444333 56777788999888876665 89999984
No 40
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=77.50 E-value=0.49 Score=50.84 Aligned_cols=58 Identities=10% Similarity=-0.033 Sum_probs=40.1
Q ss_pred CceEEEEeecccc----cCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCc
Q 042063 243 VETVLVARTDAEA----ATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGL 314 (575)
Q Consensus 243 ~d~vIiARTDA~~----a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l 314 (575)
-+|+.-.|+ ... ..+++++|+ |+++|..||. +|+. ++.-.+.+||.+|++++..+.|+
T Consensus 247 ~~fl~g~~~-~eg~y~~~~gld~AI~-Ra~AYa~gAD-----------~if~-e~~~~~~eei~~f~~~v~~~~P~ 308 (429)
T 1f8m_A 247 QPFITGERT-REGFYRTKNGIEPCIA-RAKAYAPFAD-----------LIWM-ETGTPDLEAARQFSEAVKAEYPD 308 (429)
T ss_dssp GGGEEEEEC-TTSCEEECCSHHHHHH-HHHHHGGGCS-----------EEEE-CCSSCCHHHHHHHHHHHHTTCTT
T ss_pred cccccCCCC-cccccccccCHHHHHH-HHHHHHhcCC-----------EEEe-CCCCCCHHHHHHHHHHhcccCCC
Confidence 346665554 322 357999999 9999986544 4432 22236899999999999976663
No 41
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=77.48 E-value=2.9 Score=42.04 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=71.9
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.. ...-||+=+ ++....+
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v---------~GttGE~~~Lt~~Er~~v~~~~~~~~~---grvpviaGv---g~~~t~~ 85 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIV---------NGTTAESPTLTTDEKELILKTVIDLVD---KRVPVIAGT---GTNDTEK 85 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE---------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEEC---CCSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccccccCCHHHHHHHHHHHHHHhC---CCCcEEEeC---CcccHHH
Confidence 6678899999999999999976 455555577889999988888886653 345455544 3345778
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 86 ai~-la~~a~~~Gadavlv~~P~y~--------------~~~~~~l~~~f~~ia~a~~lPiilYn~ 136 (292)
T 3daq_A 86 SIQ-ASIQAKALGADAIMLITPYYN--------------KTNQRGLVKHFEAIADAVKLPVVLYNV 136 (292)
T ss_dssp HHH-HHHHHHHHTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhCCCCEEEEec
Confidence 888 555443 56532 2221 1355566665555554 689988863
No 42
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=77.24 E-value=4.9 Score=40.28 Aligned_cols=108 Identities=10% Similarity=0.097 Sum_probs=71.4
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.. ...-||+=+=+ ....+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~---~~t~~ 83 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVA---------VGTTGESPTLSHEEHKKVIEKVVDVVN---GRVQVIAGAGS---NCTEE 83 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCC---SSHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCC---CCHHH
Confidence 5677899999999999999876 344455567889999988888886653 35556666533 45677
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 84 ai~-la~~a~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~ia~a~~lPiilYn~ 134 (289)
T 2yxg_A 84 AIE-LSVFAEDVGADAVLSITPYYN--------------KPTQEGLRKHFGKVAESINLPIVLYNV 134 (289)
T ss_dssp HHH-HHHHHHHHTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 555443 55532 2221 1355666666555555 478888774
No 43
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=77.10 E-value=5 Score=40.63 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=71.4
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.. ...-||+=+= +....+
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~st~~ 99 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVL---------AGTTGESPTTTAAEKLELLKAVREEVG---DRAKLIAGVG---TNNTRT 99 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE---------SSTTTTTTTSCHHHHHHHHHHHHHHHT---TTSEEEEECC---CSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEecCC---CCCHHH
Confidence 5677899999999999999876 555555567899999988888886653 3455666553 345777
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 100 ai~-la~~A~~~Gadavlv~~P~y~--------------~~~~~~l~~~f~~ia~a~~lPiilYn~ 150 (304)
T 3cpr_A 100 SVE-LAEAAASAGADGLLVVTPYYS--------------KPSQEGLLAHFGAIAAATEVPICLYDI 150 (304)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 555443 55532 2221 1345566655555544 478888774
No 44
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=77.09 E-value=12 Score=38.09 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=38.8
Q ss_pred HHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh
Q 042063 188 KLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF 238 (575)
Q Consensus 188 ~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~ 238 (575)
-.++.+.++|+..|-.-|.+ +.-..||-+ ...++.+|++...++++.+.
T Consensus 45 ~sA~l~e~aG~d~ilvGdSl-~~~~lG~~d-t~~vTldemi~h~~aV~r~~ 93 (281)
T 1oy0_A 45 STARIFDEAGIPVLLVGDSA-ANVVYGYDT-TVPISIDELIPLVRGVVRGA 93 (281)
T ss_dssp HHHHHHHTTTCCEEEECTTH-HHHTTCCSS-SSSCCGGGTHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEECHHH-HHHHcCCCC-CCCCCHHHHHHHHHHHHhcC
Confidence 45788999999999998887 444566654 36789999999999988654
No 45
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=76.98 E-value=3.7 Score=41.27 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=71.9
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.. ...-||+=+ ++....+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGv---g~~~t~~ 84 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVS---------VGTTGESATLNHDEHADVVMMTLDLAD---GRIPVIAGT---GANATAE 84 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccchhhCCHHHHHHHHHHHHHHhC---CCCcEEEec---CCccHHH
Confidence 5677899999999999999976 444455567899999988888886653 234455555 2345778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+. +++. ..+ ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 85 ai~-la~~a~~~Gad-----------avlv-~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~ 135 (292)
T 2ojp_A 85 AIS-LTQRFNDSGIV-----------GCLT-VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNV 135 (292)
T ss_dssp HHH-HHHHTTTSSCS-----------EEEE-ECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECC
T ss_pred HHH-HHHHHHhcCCC-----------EEEE-CCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 888 555443 4543 2211 011 1356667766666655 468888774
No 46
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=76.51 E-value=3.3 Score=41.79 Aligned_cols=66 Identities=20% Similarity=0.185 Sum_probs=50.0
Q ss_pred CCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHH
Q 042063 169 LKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARL 236 (575)
Q Consensus 169 ~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~ 236 (575)
.+||++|.|++-|.-.-+..+...-+.+||.|+-||=-. .|.|--. +|+.-++++|+-.-++..|.
T Consensus 207 ~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~-~~d~a~~-D~~~sl~p~~~~~lv~~i~~ 272 (276)
T 1vs1_A 207 HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP-NPEEALS-DAKQQLTPGEFARLMGELRW 272 (276)
T ss_dssp SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS-SGGGCSS-CGGGCBCHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC-CcccCCC-chhcCCCHHHHHHHHHHHHH
Confidence 389999999998876666677777789999999999764 2333221 67777888888877777764
No 47
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=76.33 E-value=5.1 Score=40.53 Aligned_cols=108 Identities=12% Similarity=0.084 Sum_probs=70.5
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..|--...+.+|..+=+++++.+.. ...-||+=| ++....+
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~---------GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGv---g~~~t~~ 94 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVG---------GSTGEAFVQSLSEREQVLEIVAEEAK---GKIKLIAHV---GCVSTAE 94 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEES---------STTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC---------eeccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEec---CCCCHHH
Confidence 56778999999999999999764 33444567889999888888886553 355566644 3345777
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--c-CCcccccH
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--M-AGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~-~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. |... ..+.+++.+.-++-.+ . .|++.|+-
T Consensus 95 ai~-la~~A~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~va~a~~~lPiilYn~ 146 (303)
T 2wkj_A 95 SQQ-LAASAKRYGFDAVSAVTPFYY--------------PFSFEEHCDHYRAIIDSADGLPMVVYNI 146 (303)
T ss_dssp HHH-HHHHHHHHTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHH-HHHHHHhCCCCEEEecCCCCC--------------CCCHHHHHHHHHHHHHhCCCCCEEEEeC
Confidence 887 55544 355532 2221 1355666665555544 3 78888773
No 48
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=76.29 E-value=0.51 Score=50.81 Aligned_cols=45 Identities=7% Similarity=-0.064 Sum_probs=34.3
Q ss_pred CchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCc
Q 042063 257 TLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGL 314 (575)
Q Consensus 257 ~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l 314 (575)
.+++++|+ |+++|..||. +|+. +....+.+||.+|++++..+.|+
T Consensus 263 ~gld~AI~-Ra~AY~~GAD-----------~If~-e~~~~~~eei~~f~~~v~~~~P~ 307 (433)
T 3eol_A 263 NGIEPCIA-RAIAYAPYCD-----------LIWM-ETSKPDLAQARRFAEAVHKAHPG 307 (433)
T ss_dssp CSHHHHHH-HHHHHGGGCS-----------EEEE-CCSSCCHHHHHHHHHHHHHHSTT
T ss_pred CCHHHHHH-HHHHHHhcCC-----------EEEE-eCCCCCHHHHHHHHHHhcccCCC
Confidence 57999999 9999996554 4443 33336999999999999976554
No 49
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=76.16 E-value=3.8 Score=42.43 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=71.7
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..+--...+.+|..+=+++++.+.+ ...-||+=|= +....+
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg---~~st~e 114 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFF---------LGSGGEFSQLGAEERKAIARFAIDHVD---RRVPVLIGTG---GTNARE 114 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC---SSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecC---CCCHHH
Confidence 5677899999999999999976 444455577899999988888886653 3444555553 245777
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.++|.+.-++-.+ ..||+.|+-
T Consensus 115 ai~-la~~A~~~Gadavlv~~P~Y~--------------~~s~~~l~~~f~~VA~a~~lPiilYn~ 165 (343)
T 2v9d_A 115 TIE-LSQHAQQAGADGIVVINPYYW--------------KVSEANLIRYFEQVADSVTLPVMLYNF 165 (343)
T ss_dssp HHH-HHHHHHHHTCSEEEEECCSSS--------------CCCHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 555443 45432 2221 1356667666666555 468888773
No 50
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=75.56 E-value=4.5 Score=40.64 Aligned_cols=110 Identities=14% Similarity=0.107 Sum_probs=71.2
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..+--...+.+|..+=+++++.+.. ...-||+=+- +....+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~---------GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg---~~~t~~ 84 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAV---------GTTGEASTLSMEEHTQVIKEIIRVAN---KRIPIIAGTG---ANSTRE 84 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEES---------STTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC---CSSHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC---------ccccccccCCHHHHHHHHHHHHHHhC---CCCeEEEeCC---CCCHHH
Confidence 56788999999999999999764 43444567889999988888887653 3454555443 345778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. ++. ..+ ..+.+++.++-++-.+ ..|++.|+-
T Consensus 85 ai~-la~~a~~~Gada-----------vlv-~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3tak_A 85 AIE-LTKAAKDLGADA-----------ALL-VTPYYNKPTQEGLYQHYKAIAEAVELPLILYNV 135 (291)
T ss_dssp HHH-HHHHHHHHTCSE-----------EEE-ECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCE-----------EEE-cCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 888 555443 55432 211 011 1355666666666555 578888764
No 51
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=75.38 E-value=3.7 Score=41.63 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=71.1
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..|--...+.+|..+=+++++.+.. ...-||+=+= +....+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~---------GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg---~~st~~ 95 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVL---------GTTGESPTVNEDEREKLVSRTLEIVD---GKIPVIVGAG---TNSTEK 95 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEES---------SGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECC---CSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC---------ccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEcCC---CccHHH
Confidence 56778999999999999999864 44444567889999988888886653 3444555552 345677
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 96 ai~-la~~A~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~va~a~~lPiilYn~ 146 (306)
T 1o5k_A 96 TLK-LVKQAEKLGANGVLVVTPYYN--------------KPTQEGLYQHYKYISERTDLGIVVYNV 146 (306)
T ss_dssp HHH-HHHHHHHHTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHTTCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 887 555443 45432 2221 1356667766666655 468888773
No 52
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=75.10 E-value=5.1 Score=40.48 Aligned_cols=108 Identities=12% Similarity=0.158 Sum_probs=70.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..|--...+.+|..+=+++++.+.+ ...-||+=|= +....+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~---------GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg---~~~t~~ 95 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVG---------GTTGESPTLTSEEKVALYRHVVSVVD---KRVPVIAGTG---SNNTHA 95 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEES---------STTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC---CSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC---------ccccChhhCCHHHHHHHHHHHHHHhC---CCceEEeCCC---CCCHHH
Confidence 56778999999999999999763 44444567889999988888886653 3454555553 345677
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..||+.|+-
T Consensus 96 ai~-la~~A~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~va~a~~lPiilYn~ 146 (301)
T 1xky_A 96 SID-LTKKATEVGVDAVMLVAPYYN--------------KPSQEGMYQHFKAIAESTPLPVMLYNV 146 (301)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEEcCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 555443 55432 2221 1355666666666555 468888773
No 53
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=74.53 E-value=4.2 Score=40.93 Aligned_cols=107 Identities=7% Similarity=0.051 Sum_probs=70.2
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..|--...+.+|..+=+++++.+.+ | ||+=|= +....+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~---------GttGE~~~Ls~eEr~~v~~~~~~~~~--g----viaGvg---~~~t~~ 79 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVN---------GTTGLGPSLSPEEKLENLKAVYDVTN--K----IIFQVG---GLNLDD 79 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEES---------STTTTGGGSCHHHHHHHHHHHHTTCS--C----EEEECC---CSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC---------ccccChhhCCHHHHHHHHHHHHHHcC--C----EEEecC---CCCHHH
Confidence 56678999999999999998763 44444567889999888888876543 3 556553 345778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---C-CCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---G-KTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g-~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. ++. ..+ . .+.+++.+.-++-.+ ..|++.|+-
T Consensus 80 ai~-la~~A~~~Gada-----------vlv-~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (293)
T 1w3i_A 80 AIR-LAKLSKDFDIVG-----------IAS-YAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNY 131 (293)
T ss_dssp HHH-HHHHGGGSCCSE-----------EEE-ECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCE-----------EEE-cCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 888 555443 55432 211 011 1 356667666666555 478888874
No 54
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=74.44 E-value=3.7 Score=41.23 Aligned_cols=106 Identities=11% Similarity=0.044 Sum_probs=69.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.. | ||+=|= +....+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v---------~GtTGE~~~Ls~eEr~~v~~~~~~~~~--g----ViaGvg---~~~t~~ 79 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFV---------NGTTGLGPALSKDEKRQNLNALYDVTH--K----LIFQVG---SLNLND 79 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE---------TSTTTTGGGSCHHHHHHHHHHHTTTCS--C----EEEECC---CSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC--C----eEEeeC---CCCHHH
Confidence 5677899999999999999976 444455577889998888888876543 3 556553 345777
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... +..+.+++.+.-++-.+ ..|++.|+-
T Consensus 80 ai~-la~~A~~~Gadavlv~~P~y~-------------~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (288)
T 2nuw_A 80 VME-LVKFSNEMDILGVSSHSPYYF-------------PRLPEKFLAKYYEEIARISSHSLYIYNY 131 (288)
T ss_dssp HHH-HHHHHHTSCCSEEEECCCCSS-------------CSCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEEcCCcCC-------------CCCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 887 555443 55432 2221 10256666666665555 478888874
No 55
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=74.27 E-value=3.9 Score=41.69 Aligned_cols=108 Identities=12% Similarity=-0.000 Sum_probs=70.7
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.+ ...-||+=|= + ...+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v---------~GtTGE~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg---~-st~~ 94 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVP---------NGNTGEFYALTIEEAKQVATRVTELVN---GRATVVAGIG---Y-SVDT 94 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECT---------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEEC---S-SHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CcccCChhhCCHHHHHHHHHHHHHHhC---CCCeEEecCC---c-CHHH
Confidence 5677899999999999999865 444445567899999988888886653 3555666553 3 4667
Q ss_pred HHHHHHHhh-hhccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCccccc
Q 042063 262 NVDTRDHQF-ILGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFS 318 (575)
Q Consensus 262 aId~R~~aY-i~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~ 318 (575)
+|+ ..+.. ..|+.. ++. ..+ ..+.+++.+.-++-.+ ..||+.|+
T Consensus 95 ai~-la~~A~~~Gada-----------vlv-~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 95 AIE-LGKSAIDSGADC-----------VMI-HQPVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp HHH-HHHHHHHTTCSE-----------EEE-CCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred HHH-HHHHHHHcCCCE-----------EEE-CCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 787 55544 355432 111 011 1355666666555555 47889998
No 56
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=74.16 E-value=3.2 Score=42.42 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=73.9
Q ss_pred eeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecc
Q 042063 174 ADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDA 253 (575)
Q Consensus 174 AD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA 253 (575)
.|.++|==+.....++++.+++.|+.||-+ ||..|--...+.+|..+-+++++.+. +...-||+=|
T Consensus 22 f~~~dg~iD~~~l~~lv~~li~~Gv~gl~v---------~GtTGE~~~Ls~~Er~~v~~~~~~~~---~grvpviaGv-- 87 (318)
T 3qfe_A 22 FDSKTDTLDLASQERYYAYLARSGLTGLVI---------LGTNAEAFLLTREERAQLIATARKAV---GPDFPIMAGV-- 87 (318)
T ss_dssp EETTTTEECHHHHHHHHHHHHTTTCSEEEE---------SSGGGTGGGSCHHHHHHHHHHHHHHH---CTTSCEEEEC--
T ss_pred ccCCCCCCCHHHHHHHHHHHHHcCCCEEEe---------CccccChhhCCHHHHHHHHHHHHHHh---CCCCcEEEeC--
Confidence 352334226678899999999999999976 44445556788999988888887655 3445555654
Q ss_pred cccCchHHHHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 254 EAATLIQTNVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 254 ~~a~~l~~aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
.+....++|+ ..+.. ..|+.. |... .+..+.+++.+.-++-.+ ..||+.|+-
T Consensus 88 -g~~~t~~ai~-la~~a~~~Gadavlv~~P~y~------------~kp~~~~~l~~~f~~ia~a~~lPiilYn~ 147 (318)
T 3qfe_A 88 -GAHSTRQVLE-HINDASVAGANYVLVLPPAYF------------GKATTPPVIKSFFDDVSCQSPLPVVIYNF 147 (318)
T ss_dssp -CCSSHHHHHH-HHHHHHHHTCSEEEECCCCC---------------CCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred -CCCCHHHHHH-HHHHHHHcCCCEEEEeCCccc------------CCCCCHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 3356778888 55544 356532 2111 011345666666555554 578887763
No 57
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=73.76 E-value=5 Score=40.37 Aligned_cols=109 Identities=14% Similarity=0.112 Sum_probs=70.2
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.+ ...-||+=+= +....+
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg---~~~t~~ 86 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTL---------FGTTGEGCSVGSRERQAILSSFIAAGI---APSRIVTGVL---VDSIED 86 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE---------SSTTTTGGGSCHHHHHHHHHHHHHTTC---CGGGEEEEEC---CSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CccHHH
Confidence 5677899999999999999976 444455577889999888888886543 3343445443 245677
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh-----cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA-----MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~-----~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... +..+.+++.+.-++-.+ ..|++.|+-
T Consensus 87 ai~-la~~A~~~Gadavlv~~P~y~-------------~~~s~~~l~~~f~~va~a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 87 AAD-QSAEALNAGARNILLAPPSYF-------------KNVSDDGLFAWFSAVFSKIGKDARDILVYNI 141 (294)
T ss_dssp HHH-HHHHHHHTTCSEEEECCCCSS-------------CSCCHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEEcCCcCC-------------CCCCHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 887 555443 55432 2221 10356666666555554 468888773
No 58
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=73.34 E-value=3.6 Score=41.85 Aligned_cols=110 Identities=10% Similarity=0.065 Sum_probs=70.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+-+++++.+. +...-||+=| ++....+
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v---------~GtTGE~~~Ls~~Er~~v~~~~~~~~---~grvpviaGv---g~~~t~~ 91 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCI---------LANFSEQFAITDDERDVLTRTILEHV---AGRVPVIVTT---SHYSTQV 91 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE---------SSGGGTGGGSCHHHHHHHHHHHHHHH---TTSSCEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccCcccCCHHHHHHHHHHHHHHh---CCCCcEEEec---CCchHHH
Confidence 5678899999999999999976 34444457788999998888888665 3345555555 3345777
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCccccc
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFS 318 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~ 318 (575)
+|+ ..+.. ..|+.. |... .....+.+++.+.-++-.+ ..|++.|+
T Consensus 92 ai~-la~~A~~~Gadavlv~~Pyy~-----------~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 92 CAA-RSLRAQQLGAAMVMAMPPYHG-----------ATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp HHH-HHHHHHHTTCSEEEECCSCBT-----------TTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHH-HHHHHHHcCCCEEEEcCCCCc-----------cCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 887 55544 355422 2210 0002355666666555555 57888777
No 59
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=73.31 E-value=5.5 Score=40.00 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=69.9
Q ss_pred CchHHHHHHHHHHH-cCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchH
Q 042063 182 GTTATVKLCKLFVE-RGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQ 260 (575)
Q Consensus 182 g~~nv~~lvk~~ie-AGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~ 260 (575)
+.....++++.+++ .|+.||-+= |+.|--...+.+|..+=+++++.+.+ ...-||+=|= +....
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~---------GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~ 86 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVG---------GSTGENFMLSTEEKKEIFRIAKDEAK---DQIALIAQVG---SVNLK 86 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEES---------SGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECC---CSCHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeC---------ccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEecC---CCCHH
Confidence 56778999999999 999999763 33444567889999888888886653 3555666663 34567
Q ss_pred HHHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 261 TNVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 261 ~aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
++|+ ..+.. ..|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 87 ~ai~-la~~a~~~Gadavlv~~P~y~--------------~~~~~~l~~~f~~va~a~~lPiilYn~ 138 (293)
T 1f6k_A 87 EAVE-LGKYATELGYDCLSAVTPFYY--------------KFSFPEIKHYYDTIIAETGSNMIVYSI 138 (293)
T ss_dssp HHHH-HHHHHHHHTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred HHHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 7887 55544 356532 2221 1245555555544444 478888773
No 60
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=73.27 E-value=3.7 Score=41.92 Aligned_cols=110 Identities=9% Similarity=0.002 Sum_probs=71.3
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..+--...+.+|..+=+++++.+.. ...-||+=| .+....+
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~---------GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGv---g~~~t~~ 107 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPL---------GSTGEGAYLSDPEWDEVVDFTLKTVA---HRVPTIVSV---SDLTTAK 107 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECS---------SGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC---------ccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEec---CCCCHHH
Confidence 56788999999999999999764 44444567889999888888886653 345455544 3345788
Q ss_pred HHHHHHHhh-hhccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQF-ILGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. ++. ..+ ..+.+++.++-++-.+ ..|++.|+-
T Consensus 108 ai~-la~~A~~~Gada-----------vlv-~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 158 (315)
T 3na8_A 108 TVR-RAQFAESLGAEA-----------VMV-LPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNN 158 (315)
T ss_dssp HHH-HHHHHHHTTCSE-----------EEE-CCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCE-----------EEE-CCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 888 55544 355532 111 011 1355666666666555 478888773
No 61
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=72.75 E-value=3.9 Score=41.46 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=72.5
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.+--...+.+|..+=+++++.+. +...-||+=|- +....+
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Ls~~Er~~v~~~~~~~~---~gr~pviaGvg---~~~t~~ 97 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVV---------QGSNGEFPFLTSSERLEVVSRVRQAM---PKNRLLLAGSG---CESTQA 97 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEE---------SSGGGTGGGSCHHHHHHHHHHHHHTS---CTTSEEEEECC---CSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccchhhCCHHHHHHHHHHHHHHc---CCCCcEEEecC---CCCHHH
Confidence 5667889999999999999976 45555557788999888888877654 34666777553 346777
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. |... ....+.+++.+.-++-.+ ..|++.|+-
T Consensus 98 ai~-la~~A~~~Gadavlv~~P~y~------------~~~~s~~~l~~~f~~ia~a~~lPiilYn~ 150 (307)
T 3s5o_A 98 TVE-MTVSMAQVGADAAMVVTPCYY------------RGRMSSAALIHHYTKVADLSPIPVVLYSV 150 (307)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCTT------------GGGCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCEEEEcCCCcC------------CCCCCHHHHHHHHHHHHhhcCCCEEEEeC
Confidence 887 55444 355432 2111 001356667666666555 478888774
No 62
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=72.48 E-value=0.93 Score=48.80 Aligned_cols=60 Identities=15% Similarity=-0.002 Sum_probs=41.3
Q ss_pred CceEEEEeecc---cccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcc
Q 042063 243 VETVLVARTDA---EAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLK 315 (575)
Q Consensus 243 ~d~vIiARTDA---~~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~ 315 (575)
..|+.-.||-. ....+++++|+ |+++|..|| |+|+. +..-.+.+||.+|++++....|+.
T Consensus 251 ~~fi~G~r~~eG~y~~~~gld~AI~-Ra~AY~~GA-----------D~if~-E~~~~~~~ei~~f~~~v~~~~P~~ 313 (435)
T 3lg3_A 251 REFITGDRTAEGFFRTRAGIEQAIS-RGLAYAPYA-----------DLVWC-ETSTPDLALAKRFADAVHAQFPGK 313 (435)
T ss_dssp GGGEEEEECTTCCEEECCSHHHHHH-HHHHHGGGC-----------SEEEE-CCSSCCHHHHHHHHHHHHHHSTTC
T ss_pred chhhcccccccccccccCCHHHHHH-HHHHHHccC-----------CEEEe-cCCCCCHHHHHHHHHHhccccCCe
Confidence 34666567642 11257999999 999998555 44443 333369999999999999765543
No 63
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=72.44 E-value=4.1 Score=41.46 Aligned_cols=108 Identities=11% Similarity=0.032 Sum_probs=71.6
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.. ...-||+=|- . ...+
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Ls~eEr~~v~~~~v~~~~---grvpViaGvg---~-~t~~ 94 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVP---------CGNTSEFYALSLEEAKEEVRRTVEYVH---GRALVVAGIG---Y-ATST 94 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECT---------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEEC---S-SHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe---------CccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEEeC---c-CHHH
Confidence 5678899999999999999965 454455577889999888888876653 3555666663 2 5778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHH---CCCCHHHHHHHHHHHHh--cCCccccc
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMA---AGKTGAELQAIEDNWIA--MAGLKTFS 318 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s---~g~s~~ei~~~~~~W~~--~~~l~tf~ 318 (575)
+|+ ..+... .|+.. ++. .. ...+.+++.+.-++-.+ ..||+.|+
T Consensus 95 ai~-la~~A~~~Gada-----------vlv-~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 95 AIE-LGNAAKAAGADA-----------VMI-HMPIHPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp HHH-HHHHHHHHTCSE-----------EEE-CCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHH-HHHHHHhcCCCE-----------EEE-cCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 888 555443 55532 211 00 12356666666555554 47899887
No 64
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=72.24 E-value=4.7 Score=41.13 Aligned_cols=110 Identities=12% Similarity=0.056 Sum_probs=70.7
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+=-. .|--...+.+|..+-+++++.+.. ...-||+=| .+....+
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~Gt---------TGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGv---g~~st~e 106 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGT---------TGESATLDVEEHIQVIRRVVDQVK---GRIPVIAGT---GANSTRE 106 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSG---------GGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc---------ccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeC---CCcCHHH
Confidence 5678899999999999999976443 344467788999888888876653 344455544 3345778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. ++. ..+ ..+.+++.++-++-.+ ..|++.|+-
T Consensus 107 ai~-la~~A~~~Gada-----------vlv-~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 157 (314)
T 3qze_A 107 AVA-LTEAAKSGGADA-----------CLL-VTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNV 157 (314)
T ss_dssp HHH-HHHHHHHTTCSE-----------EEE-ECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCE-----------EEE-cCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 888 665554 55432 211 011 1355666666555555 578888764
No 65
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=72.01 E-value=5 Score=40.95 Aligned_cols=108 Identities=13% Similarity=0.097 Sum_probs=70.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=++.++.+.. ...-||+=|= +....+
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v---------~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg---~~st~~ 105 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSP---------VGTTGESPTLTHEEHKRIIELCVEQVA---KRVPVVAGAG---SNSTSE 105 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC---------SSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECC---CSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe---------CccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCC---CCCHHH
Confidence 5678899999999999999975 444455577889999888888886553 3444555443 345778
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..||+.|+-
T Consensus 106 ai~-la~~A~~~Gadavlv~~P~y~--------------~~~~~~l~~~f~~va~a~~lPiilYn~ 156 (315)
T 3si9_A 106 AVE-LAKHAEKAGADAVLVVTPYYN--------------RPNQRGLYTHFSSIAKAISIPIIIYNI 156 (315)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEECCCCCC--------------CCCHHHHHHHHHHHHHcCCCCEEEEeC
Confidence 888 555443 55432 2221 1355566665555555 578888764
No 66
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=72.00 E-value=29 Score=35.31 Aligned_cols=27 Identities=19% Similarity=0.074 Sum_probs=20.6
Q ss_pred ceeecC-CCCHHHHHHHHc-cCCeEeech
Q 042063 79 ASRTFG-ALDPVQVTMMAK-HLDSIYVSG 105 (575)
Q Consensus 79 ~l~~~G-a~D~~sA~~~a~-gf~AIy~SG 105 (575)
++++.| +.++-.|+.+.+ |.++|-+|+
T Consensus 150 ~~vi~G~v~s~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 150 SFVIAGNVGTPEAVRELENAGADATKVGI 178 (336)
T ss_dssp SEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred CEEEECCcCCHHHHHHHHHcCCCEEEEec
Confidence 555556 888888887665 899999965
No 67
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=71.75 E-value=0.93 Score=48.87 Aligned_cols=60 Identities=7% Similarity=-0.144 Sum_probs=42.2
Q ss_pred CceEEEEeeccc---ccCchHHHHHHHHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCcc
Q 042063 243 VETVLVARTDAE---AATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLK 315 (575)
Q Consensus 243 ~d~vIiARTDA~---~a~~l~~aId~R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~~~~l~ 315 (575)
.+|+.-.||-.- ...+++++|+ |+++|..||...++ +..-.+.+||.+|++++.++.|+.
T Consensus 251 ~~fi~G~r~~eg~~~~~~gldeAI~-Ra~AY~~GAD~if~------------E~~~~~~eei~~f~~~v~~~~P~~ 313 (439)
T 3i4e_A 251 KPYLTGERTVEGFFRTKPGLEQAIS-RGLAYAPYADLIWC------------ETGKPDLEYAKKFAEAIHKQFPGK 313 (439)
T ss_dssp GGGEEEEECTTSCEEECCSHHHHHH-HHHHHTTTCSEEEE------------CCSSCCHHHHHHHHHHHHHHSTTC
T ss_pred chhhcccCcccccccccCCHHHHHH-HHHHHHhhCCEEEe------------cCCCCCHHHHHHHHHHhcccCCce
Confidence 457777776431 1357999999 99999866544333 222268999999999999766553
No 68
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=71.73 E-value=28 Score=35.73 Aligned_cols=57 Identities=23% Similarity=0.387 Sum_probs=43.1
Q ss_pred HhHHhhhhhcCC-CceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeeecchhh
Q 042063 419 TKFAGGIKSKHP-EIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGF 476 (575)
Q Consensus 419 ~~Fa~~i~~~~P-~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~ItLaG~ 476 (575)
.+-.++|++..| +..+.+.+||. .|...|++.++...|.+.|.+.|.-+--|+..++
T Consensus 206 ~eiv~aVR~avG~d~pV~vRls~~-~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 263 (349)
T 3hgj_A 206 LQVAQAVREVVPRELPLFVRVSAT-DWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGV 263 (349)
T ss_dssp HHHHHHHHHHSCTTSCEEEEEESC-CCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred HHHHHHHHHHhcCCceEEEEeccc-cccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCc
Confidence 355678888876 55699999995 4667789999999999999999965544443333
No 69
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=70.79 E-value=2.6 Score=42.98 Aligned_cols=152 Identities=15% Similarity=0.132 Sum_probs=81.7
Q ss_pred CCceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCC---CCCC-CCcCcHHHHHHHHHHHhhhhHHH
Q 042063 77 GTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGP---DLAD-YPYDTVPNKVEHLFFAQQYHDRK 147 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~P---D~~~-~p~~tv~~~v~rI~~aq~~hDr~ 147 (575)
-+.-++-.++|+.++..+++..+.+.+.++.+-.. +. ..+.| --+. .+++++.+.++.|...=
T Consensus 88 ~Glp~~te~~d~~~~~~l~~~vd~~kIgA~~~~n~~Ll~~~a--~~~kPV~lk~G~~~t~~ei~~Av~~i~~~G------ 159 (292)
T 1o60_A 88 FGVKIITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMA--KTGAVINVKKPQFLSPSQMGNIVEKIEECG------ 159 (292)
T ss_dssp HCCEEEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHH--HTTCEEEEECCTTSCGGGHHHHHHHHHHTT------
T ss_pred cCCcEEEecCCHHHHHHHHhcCCEEEECcccccCHHHHHHHH--cCCCcEEEeCCCCCCHHHHHHHHHHHHHcC------
Confidence 36777778999999877777788888888332110 00 12232 1233 36778888877764310
Q ss_pred HHHHHhhccHhhhhc-CCC----CC----------C-CCceeeeCCCC-----------CCCchHHHHHHHHHHHcCceE
Q 042063 148 QREARMSMSREERAR-TPC----VD----------Y-LKPIIADGDTG-----------FGGTTATVKLCKLFVERGAAG 200 (575)
Q Consensus 148 q~~~r~~~~~e~~~~-~~~----vd----------~-~lPIIAD~DtG-----------fGg~~nv~~lvk~~ieAGaAG 200 (575)
+ ..+.+. +|.. .++ +| + .+||++|.+.+ -|...-+..+++.-+.+||.|
T Consensus 160 -n-~~i~L~--~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~G 235 (292)
T 1o60_A 160 -N-DKIILC--DRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAG 235 (292)
T ss_dssp -C-CCEEEE--ECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSE
T ss_pred -C-CeEEEE--ECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCE
Confidence 0 000000 0000 000 00 1 38999999988 454444667788888999999
Q ss_pred EEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcC
Q 042063 201 VHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMG 242 (575)
Q Consensus 201 IhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g 242 (575)
+-||=-. .|.|-- .+|+.-++++|+-.-++..|.....+|
T Consensus 236 l~IE~H~-~~d~al-~Dg~~sl~p~~l~~lv~~ir~i~~a~g 275 (292)
T 1o60_A 236 LFLEAHP-NPNQAK-CDGPSALPLSALEGFVSQMKAIDDLVK 275 (292)
T ss_dssp EEEEEES-SGGGCS-SCCTTCEEGGGHHHHHHHHHHHHHHHH
T ss_pred EEEEecC-CcccCC-chhhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999553 122221 155555555555554444444333333
No 70
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=69.98 E-value=5.1 Score=40.41 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=70.0
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+= |..|--...+.+|..+=+++++.+.. ...-||+=+= +....+
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~---------GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg---~~~t~~ 83 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPV---------GTTGESPTLTEEEHKRVVALVAEQAQ---GRVPVIAGAG---SNNPVE 83 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECS---------SGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECC---CSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC---------ccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEccC---CCCHHH
Confidence 56678899999999999998753 44444567889999888888886653 2444555553 345677
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 84 ai~-la~~A~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~va~a~~lPiilYn~ 134 (297)
T 2rfg_A 84 AVR-YAQHAQQAGADAVLCVAGYYN--------------RPSQEGLYQHFKMVHDAIDIPIIVYNI 134 (297)
T ss_dssp HHH-HHHHHHHHTCSEEEECCCTTT--------------CCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCEEEEcCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887 55544 355532 2211 1355666666655555 478888773
No 71
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=69.42 E-value=4.9 Score=40.35 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=69.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.+ ...-||+=+= +....+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg---~~~t~~ 83 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVP---------CGTTGESPTLSKSEHEQVVEITIKTAN---GRVPVIAGAG---SNSTAE 83 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEET---------TSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECC---CSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecC---CccHHH
Confidence 5677899999999999999876 444444567889999988888887653 2343445443 234677
Q ss_pred HHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 84 ai~-la~~A~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~ia~a~~lPiilYn~ 134 (292)
T 2vc6_A 84 AIA-FVRHAQNAGADGVLIVSPYYN--------------KPTQEGIYQHFKAIDAASTIPIIVYNI 134 (292)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCEEEEcCCCCC--------------CCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 887 555443 55432 2221 1355666665555554 478888773
No 72
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=68.46 E-value=6.9 Score=39.79 Aligned_cols=108 Identities=10% Similarity=0.096 Sum_probs=71.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+. +...-||+=+ ++....+
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Ls~~Er~~v~~~~~~~~---~grvpViaGv---g~~~t~~ 90 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILL---------AGTTAESPTLTHDEELELFAAVQKVV---NGRVPLIAGV---GTNDTRD 90 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEE---------SSTTTTGGGSCHHHHHHHHHHHHHHS---CSSSCEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHh---CCCCcEEEeC---CCcCHHH
Confidence 5678899999999999999987 44445556788999888888887654 3445555544 3345778
Q ss_pred HHHHHHHhhh-hcc-C-----CCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 262 NVDTRDHQFI-LGV-T-----NPNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Ga-t-----~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
+|+ ..+... .|+ . .|... ..+.+++.+.-++-.+ ..||+.|+-
T Consensus 91 ai~-la~~A~~~Ga~davlv~~P~y~--------------~~s~~~l~~~f~~va~a~~lPiilYn~ 142 (311)
T 3h5d_A 91 SIE-FVKEVAEFGGFAAGLAIVPYYN--------------KPSQEGMYQHFKAIADASDLPIIIYNI 142 (311)
T ss_dssp HHH-HHHHHHHSCCCSEEEEECCCSS--------------CCCHHHHHHHHHHHHHSCSSCEEEEEC
T ss_pred HHH-HHHHHHhcCCCcEEEEcCCCCC--------------CCCHHHHHHHHHHHHHhCCCCEEEEec
Confidence 887 665554 354 2 22221 1355666666666655 578888764
No 73
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=67.74 E-value=34 Score=31.97 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=51.9
Q ss_pred HHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhh
Q 042063 65 KLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQY 143 (575)
Q Consensus 65 kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~ 143 (575)
.+.+.++++. ++..+..+++++..+..+.+ |.+.|.++..+.. ...+|.. +...-.+.+++|.+
T Consensus 108 ~~i~~~~~~~--~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t-------~~~~~~~--~~~~~~~~~~~~~~---- 172 (223)
T 1y0e_A 108 ELVSYIRTHA--PNVEIMADIATVEEAKNAARLGFDYIGTTLHGYT-------SYTQGQL--LYQNDFQFLKDVLQ---- 172 (223)
T ss_dssp HHHHHHHHHC--TTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSS-------TTSTTCC--TTHHHHHHHHHHHH----
T ss_pred HHHHHHHHhC--CCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCc-------CCCCCCC--CCcccHHHHHHHHh----
Confidence 3344444443 24566679999988876554 7887754432211 0111211 01111234444431
Q ss_pred hHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 144 HDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 144 hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
.++ +||++++ |..++ +.++.+.++||.||.+=
T Consensus 173 ---------------------~~~--ipvia~G--GI~~~----~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 173 ---------------------SVD--AKVIAEG--NVITP----DMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp ---------------------HCC--SEEEEES--SCCSH----HHHHHHHHTTCSEEEEC
T ss_pred ---------------------hCC--CCEEEec--CCCCH----HHHHHHHHcCCCEEEEC
Confidence 245 9999985 33333 45566777899999873
No 74
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=67.19 E-value=6.7 Score=39.47 Aligned_cols=144 Identities=20% Similarity=0.177 Sum_probs=81.1
Q ss_pred CceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCCC---CCC-CCcCcHHHHHHHHHHHhhhhHHHH
Q 042063 78 TASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGPD---LAD-YPYDTVPNKVEHLFFAQQYHDRKQ 148 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~PD---~~~-~p~~tv~~~v~rI~~aq~~hDr~q 148 (575)
+.-++-.++|+.++..+++..+.+.+.+..+-.. ++ ..+.|= .+. .+++++.+.++.|...=
T Consensus 75 Glp~~te~~d~~~~~~l~~~vd~~~IgA~~~rn~~ll~~~a--~~~~PV~lK~G~~~t~~e~~~Av~~i~~~G------- 145 (267)
T 2nwr_A 75 GLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAA--KTGRAVNVKKGQFLAPWDTKNVVEKLKFGG------- 145 (267)
T ss_dssp CCEEEEECSSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHH--TTTSEEEEECCTTCCGGGGHHHHHHHHHTT-------
T ss_pred CCeEEEecCCHHhHHHHHhcCCEEEECcccccCHHHHHHHH--cCCCcEEEeCCCCCCHHHHHHHHHHHHHcC-------
Confidence 5667779999999887777788888888433110 11 223331 133 46778888887764310
Q ss_pred HHHHhhccHhhhhcC-CC----CC---------CCCceeeeCCCC-----------CCCchHHHHHHHHHHHcCceEEEe
Q 042063 149 REARMSMSREERART-PC----VD---------YLKPIIADGDTG-----------FGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 149 ~~~r~~~~~e~~~~~-~~----vd---------~~lPIIAD~DtG-----------fGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
+ ..+.+. +|... ++ +| .. |||+|+.++ -|...-+..+++.-+.+||.|+-|
T Consensus 146 N-~~i~L~--~rG~~~~y~~~~~dl~~i~~lk~~~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mI 221 (267)
T 2nwr_A 146 A-KEIYLT--ERGTTFGYNNLVVDFRSLPIMKQWA-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFM 221 (267)
T ss_dssp C-SSEEEE--ECCEECSSSCEECCTTHHHHHTTTS-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEE
T ss_pred C-CeEEEE--ECCCCCCCCccccCHHHHHHHHHcC-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEE
Confidence 0 000000 01000 00 11 02 999999888 344455677788889999999999
Q ss_pred ccCCCcccccCCCCCCcccCHHHHHHHHHHHHH
Q 042063 204 EDQSSVTKKCGHMAGKVLVAISEHINRLVAARL 236 (575)
Q Consensus 204 EDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~ 236 (575)
|=-. .|.|-- .+|+.-++.+|+-.-++..|.
T Consensus 222 E~H~-~pd~al-~Dg~qsl~p~~l~~l~~~i~~ 252 (267)
T 2nwr_A 222 ETHP-EPEKAL-SDASTQLPLSQLEGIIEAILE 252 (267)
T ss_dssp EEES-CGGGCS-SCTTTCEEGGGHHHHHHHHHH
T ss_pred EecC-CcccCC-CccccCCCHHHHHHHHHHHHH
Confidence 9654 122211 155555555555544444443
No 75
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=66.58 E-value=3.6 Score=41.60 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=69.7
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+.. ...-||+=| ++....+
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGv---g~~~t~~ 87 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTP---------LGSTGEFAYLGTAQREAVVRATIEAAQ---RRVPVVAGV---ASTSVAD 87 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBT---------TSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCBEEEE---EESSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---------CccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeC---CCCCHHH
Confidence 5678899999999999999865 444455577889999888888887653 334344444 2345777
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHC---CCCHHHHHHHHHHHHh--cCCccccc
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAA---GKTGAELQAIEDNWIA--MAGLKTFS 318 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~---g~s~~ei~~~~~~W~~--~~~l~tf~ 318 (575)
+|+ ..+... .|+.. ++. ..+ ..+.+++.+.-++-.+ ..|++.|+
T Consensus 88 ai~-la~~a~~~Gada-----------vlv-~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 88 AVA-QAKLYEKLGADG-----------ILA-ILEAYFPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp HHH-HHHHHHHHTCSE-----------EEE-EECCSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHH-HHHHHHHcCCCE-----------EEE-cCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 887 555443 55532 211 111 1355666666666555 47888776
No 76
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=66.48 E-value=28 Score=34.36 Aligned_cols=56 Identities=29% Similarity=0.375 Sum_probs=33.0
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF 238 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~ 238 (575)
+||++++ |-.++ +.++.+.++||.||.+-=-.. + ...+.--+.++++.|++.|.+.
T Consensus 179 iPviv~g--GI~t~----eda~~~~~~GAdgViVGSAi~--~-----a~dp~~~~~~l~~~v~~~~~~~ 234 (264)
T 1xm3_A 179 VPVIVDA--GIGSP----KDAAYAMELGADGVLLNTAVS--G-----ADDPVKMARAMKLAVEAGRLSY 234 (264)
T ss_dssp SCBEEES--CCCSH----HHHHHHHHTTCSEEEESHHHH--T-----SSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEe--CCCCH----HHHHHHHHcCCCEEEEcHHHh--C-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999985 44444 446777889999998754321 0 0112223455555555555443
No 77
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=66.39 E-value=6.9 Score=41.35 Aligned_cols=146 Identities=13% Similarity=0.058 Sum_probs=91.5
Q ss_pred CCceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCCC---CCC-CCcCcHHHHHHHHHHHhhhhHHH
Q 042063 77 GTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGPD---LAD-YPYDTVPNKVEHLFFAQQYHDRK 147 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~PD---~~~-~p~~tv~~~v~rI~~aq~~hDr~ 147 (575)
-+..++--++|+-++..+++..+.+.+.+.-+-.. ++ ..+.|= -+. .+++++.+.|+.|..+- .
T Consensus 205 ~Gl~~~te~~d~~~~~~l~~~vd~lkIgs~~~~n~~LL~~~a--~~gkPVilk~G~~~t~~e~~~Ave~i~~~G----n- 277 (385)
T 3nvt_A 205 YGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAG--RVDKPILLKRGLSATIEEFIGAAEYIMSQG----N- 277 (385)
T ss_dssp HTCEEEEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHH--TSSSCEEEECCTTCCHHHHHHHHHHHHTTT----C-
T ss_pred cCCEEEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHH--ccCCcEEEecCCCCCHHHHHHHHHHHHHcC----C-
Confidence 35667778888888876666688888888765321 11 234442 233 56778888888774310 0
Q ss_pred HHHHHhhccHhhhhcC-------CCCC----------CCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcc
Q 042063 148 QREARMSMSREERART-------PCVD----------YLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVT 210 (575)
Q Consensus 148 q~~~r~~~~~e~~~~~-------~~vd----------~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~ 210 (575)
..+-+. +++.. +.+| +.+||+.|.-.|.|...-|..+.+.-+.+||.|+.||=-. .|
T Consensus 278 ---~~i~L~--~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~-~p 351 (385)
T 3nvt_A 278 ---GKIILC--ERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP-DP 351 (385)
T ss_dssp ---CCEEEE--ECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCS-CG
T ss_pred ---CeEEEE--ECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecC-Ch
Confidence 000000 00000 0001 2389999999998887778889999999999999999643 34
Q ss_pred cccCCCCCCcccCHHHHHHHHHHHHH
Q 042063 211 KKCGHMAGKVLVAISEHINRLVAARL 236 (575)
Q Consensus 211 KkCGH~~Gk~Lvp~~E~v~RL~AAR~ 236 (575)
.|.- .+++.-++++|+-.-++..|.
T Consensus 352 d~a~-~D~~~sl~p~el~~lv~~i~~ 376 (385)
T 3nvt_A 352 AVAL-SDSAQQMDIPEFEEFWNAILA 376 (385)
T ss_dssp GGCS-SCTTTSBCHHHHHHHHHHHHH
T ss_pred hhcC-CcccccCCHHHHHHHHHHHHH
Confidence 4433 466677777777666666664
No 78
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=66.36 E-value=8.9 Score=39.05 Aligned_cols=157 Identities=13% Similarity=0.106 Sum_probs=82.7
Q ss_pred CceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCC---CCCC-CCcCcHHHHHHHHHHHh-----hh
Q 042063 78 TASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGP---DLAD-YPYDTVPNKVEHLFFAQ-----QY 143 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~P---D~~~-~p~~tv~~~v~rI~~aq-----~~ 143 (575)
+..++-.++|+-++..+++..+.+.+.+..+-.. ++ ..+.| --+. .+++++.+.|+.|..+- +.
T Consensus 91 Glp~~Tev~d~~~v~~l~~~vd~lqIgA~~~~n~~LLr~va--~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~ 168 (285)
T 3sz8_A 91 GVPVITDVHEAEQAAPVAEIADVLQVPAFLARQTDLVVAIA--KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLC 168 (285)
T ss_dssp CCCEEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHH--HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHhCCEEEECccccCCHHHHHHHH--ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 6777788999999876666788888888432110 00 12333 2233 46778888888875320 00
Q ss_pred hHHHHH-HHH--hhcc--HhhhhcCCCCCCCCceeeeCCCCC-----------CCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 144 HDRKQR-EAR--MSMS--REERARTPCVDYLKPIIADGDTGF-----------GGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 144 hDr~q~-~~r--~~~~--~e~~~~~~~vd~~lPIIAD~DtGf-----------Gg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
|=-..+ ..+ +.+. +..+. .. +.+||++|.|+.- |...-|..+.+.-+.+||.|+.||=-.
T Consensus 169 erg~~y~~~~~~vdl~~i~~lk~---~~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~ 244 (285)
T 3sz8_A 169 ERGSSFGYDNLVVDMLGFRQMAE---TT-GGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHP 244 (285)
T ss_dssp ECCEECSSSCEECCTTHHHHHHH---HT-TSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEES
T ss_pred eCCCCCCCCcCccCHHHHHHHHH---hC-CCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEecc
Confidence 000000 000 0000 00000 11 1389999999973 555667788899999999999998553
Q ss_pred CcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcC
Q 042063 208 SVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMG 242 (575)
Q Consensus 208 ~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g 242 (575)
.|.|-- .+++.-++.+|+-.-++..|.....+|
T Consensus 245 -~pd~al-~D~~~sl~p~el~~lv~~i~~i~~~lg 277 (285)
T 3sz8_A 245 -DPDRAR-CDGPSALPLHQLEGLLSQMKAIDDLVK 277 (285)
T ss_dssp -CGGGCS-CSSCCCEEGGGHHHHHHHHHHHHHHHT
T ss_pred -ChhccC-CchhhccCHHHHHHHHHHHHHHHHHhC
Confidence 232221 155555555555444444444334445
No 79
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=65.69 E-value=4.7 Score=40.46 Aligned_cols=110 Identities=11% Similarity=0.116 Sum_probs=70.1
Q ss_pred CCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCc
Q 042063 179 GFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATL 258 (575)
Q Consensus 179 GfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~ 258 (575)
| =+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++++.+.. ...-||+=+= +..
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~---------~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pvi~Gvg---~~~ 81 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIV---------CGTTGEATTMTETERKETIKFVIDKVN---KRIPVIAGTG---SNN 81 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEE---------SSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC---CSS
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEE---------CccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC---ccc
Confidence 5 57778899999999999999976 344444567889999988888886653 2343555553 345
Q ss_pred hHHHHHHHHHhhh-hccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCcccccH
Q 042063 259 IQTNVDTRDHQFI-LGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--MAGLKTFSE 319 (575)
Q Consensus 259 l~~aId~R~~aYi-~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~~~l~tf~e 319 (575)
..++|+ ..+... .|+.. |... ..+.+++.+.-++-.+ ..|++.|+-
T Consensus 82 t~~ai~-la~~a~~~Gadavlv~~P~y~--------------~~s~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3a5f_A 82 TAASIA-MSKWAESIGVDGLLVITPYYN--------------KTTQKGLVKHFKAVSDAVSTPIIIYNV 135 (291)
T ss_dssp HHHHHH-HHHHHHHTTCSEEEEECCCSS--------------CCCHHHHHHHC-CTGGGCCSCEEEEEC
T ss_pred HHHHHH-HHHHHHhcCCCEEEEcCCCCC--------------CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 677887 555443 55432 2221 1355556555544444 468887773
No 80
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=64.81 E-value=30 Score=35.02 Aligned_cols=41 Identities=15% Similarity=0.023 Sum_probs=29.3
Q ss_pred HHHHHHhhhhCCCceeecCC---CCHHHHHHHHc-cCCeEeechH
Q 042063 66 LWRTLKTHQANGTASRTFGA---LDPVQVTMMAK-HLDSIYVSGW 106 (575)
Q Consensus 66 L~~lL~~~~~~~~~l~~~Ga---~D~~sA~~~a~-gf~AIy~SG~ 106 (575)
+++.++...+-+.|+++-++ +++-.|+.+.+ |.++|-+||.
T Consensus 170 ~~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ 214 (332)
T 1vcf_A 170 LVERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGA 214 (332)
T ss_dssp HHHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCB
T ss_pred HHHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCC
Confidence 45666655443567777777 88888876655 8999999874
No 81
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=63.77 E-value=9.3 Score=38.79 Aligned_cols=111 Identities=9% Similarity=0.018 Sum_probs=70.5
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||..|--...+.+|..+=+++++.+. | ..-||+=| ++....+
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Lt~~Er~~v~~~~v~~~---g-rvpViaGv---g~~~t~~ 90 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTV---------LGILGEAPKLDAAEAEAVATRFIKRA---K-SMQVIVGV---SAPGFAA 90 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE---------STGGGTGGGSCHHHHHHHHHHHHHHC---T-TSEEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEe---------CccCcChhhCCHHHHHHHHHHHHHHc---C-CCcEEEec---CCCCHHH
Confidence 5678899999999999999976 44445556788899888888877654 2 45566644 3446778
Q ss_pred HHHHHHHhhh-hccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh--c--CCcccccH
Q 042063 262 NVDTRDHQFI-LGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIA--M--AGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aYi-~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~--~--~~l~tf~e 319 (575)
+|+ ..+... .|+...-+- +|. -..+.+++.+.-++-.+ . .||+.|+-
T Consensus 91 ai~-la~~A~~~Gadavlv~-~P~---------~~~s~~~l~~~f~~va~a~~~~lPiilYn~ 142 (313)
T 3dz1_A 91 MRR-LARLSMDAGAAGVMIA-PPP---------SLRTDEQITTYFRQATEAIGDDVPWVLQDY 142 (313)
T ss_dssp HHH-HHHHHHHHTCSEEEEC-CCT---------TCCSHHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred HHH-HHHHHHHcCCCEEEEC-CCC---------CCCCHHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 888 555443 565321110 011 01355666666555554 3 78888763
No 82
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=62.89 E-value=18 Score=38.89 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=54.6
Q ss_pred HHHHhhhhC--CCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhh
Q 042063 68 RTLKTHQAN--GTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYH 144 (575)
Q Consensus 68 ~lL~~~~~~--~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~h 144 (575)
+.++...+. +-|++.-++.++-.|+.+.+ |.++|-++. .-... .+ ....++.+ .|.......+.++.+
T Consensus 285 ~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~-~~G~~-~~-t~~~~~~g-~~~~~~~~~~~~~~~----- 355 (514)
T 1jcn_A 285 AMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGM-GCGSI-CI-TQEVMACG-RPQGTAVYKVAEYAR----- 355 (514)
T ss_dssp HHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECS-SCSCC-BT-TBCCCSCC-CCHHHHHHHHHHHHG-----
T ss_pred HHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECC-CCCcc-cc-cccccCCC-ccchhHHHHHHHHHh-----
Confidence 344443333 55666667888888877665 899998832 11110 00 11122222 232233334444421
Q ss_pred HHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 145 DRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 145 Dr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
.++ +|||+|+--. ++.+ +.+++.+||.+|.+==..
T Consensus 356 --------------------~~~--ipVia~GGI~--~~~d----i~kala~GAd~V~iG~~~ 390 (514)
T 1jcn_A 356 --------------------RFG--VPIIADGGIQ--TVGH----VVKALALGASTVMMGSLL 390 (514)
T ss_dssp --------------------GGT--CCEEEESCCC--SHHH----HHHHHHTTCSEEEESTTT
T ss_pred --------------------hCC--CCEEEECCCC--CHHH----HHHHHHcCCCeeeECHHH
Confidence 245 9999995332 2333 334455899999986654
No 83
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=62.69 E-value=15 Score=40.08 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=23.8
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeechH
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSGW 106 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~ 106 (575)
+.|+++-|+.++-.|+.+.+ |.++|.+|+.
T Consensus 343 ~~PvivKgv~~~e~A~~a~~aGad~I~vs~h 373 (511)
T 1kbi_A 343 KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNH 373 (511)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECCT
T ss_pred CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCC
Confidence 57888888888777776555 8999999874
No 84
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=61.90 E-value=2.9 Score=42.25 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=35.3
Q ss_pred CceeeeCCCC-----------CCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHH
Q 042063 170 KPIIADGDTG-----------FGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARL 236 (575)
Q Consensus 170 lPIIAD~DtG-----------fGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~ 236 (575)
+||++|.+++ -|...-+..+.+.-+.+||.|+-||=-. .|.|-- .+|+.-++++|+-.-++..|.
T Consensus 191 ~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~-~~d~al-~D~~~sl~p~~l~~lv~~i~~ 266 (280)
T 2qkf_A 191 LPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHP-DPKLAK-CDGPSALPLHLLEDFLIRIKA 266 (280)
T ss_dssp CCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC------------------CCHHHHHHHHHHH
T ss_pred CCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecC-CcccCC-CccccCCCHHHHHHHHHHHHH
Confidence 8999999998 4444445677788889999999999553 122111 145544454555444444443
No 85
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=60.29 E-value=26 Score=36.55 Aligned_cols=30 Identities=13% Similarity=0.048 Sum_probs=24.5
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeechH
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSGW 106 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~ 106 (575)
+.|+++.|+.++-.|..+.+ |.++|-+|+.
T Consensus 225 ~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~ 255 (380)
T 1p4c_A 225 PHKLLVKGLLSAEDADRCIAEGADGVILSNH 255 (380)
T ss_dssp CSEEEEEEECCHHHHHHHHHTTCSEEEECCG
T ss_pred CCCEEEEecCcHHHHHHHHHcCCCEEEEcCC
Confidence 57888889988888876665 8999999764
No 86
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=60.11 E-value=35 Score=35.97 Aligned_cols=75 Identities=21% Similarity=0.227 Sum_probs=53.8
Q ss_pred CceeeeCCCCCCCc-hHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGT-TATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~-~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|+.+-+-+..+++ ..+.+.++++.++|..+|-| |+|| +.++-+++|+++|.+. |+|+-|
T Consensus 172 vp~~~sg~~~~~~~~e~~~~~a~~~~~~Gf~~vKi--------k~g~-------~~~~d~e~v~avR~av---G~d~~l- 232 (428)
T 3bjs_A 172 IPAYAGGIALGYQPKESLAEEAQEYIARGYKALKL--------RIGD-------AARVDIERVRHVRKVL---GDEVDI- 232 (428)
T ss_dssp EEEEEESSCSCSCCHHHHHHHHHHHHHHTCSEEEE--------ECCS-------CHHHHHHHHHHHHHHH---CTTSEE-
T ss_pred eeeeeeccccCCChHHHHHHHHHHHHHCCCCEEEE--------CCCC-------CHHHHHHHHHHHHHhc---CCCCEE-
Confidence 67665311112567 78888999999999999887 3454 5688899999998764 777766
Q ss_pred EeecccccCchHHHHH
Q 042063 249 ARTDAEAATLIQTNVD 264 (575)
Q Consensus 249 ARTDA~~a~~l~~aId 264 (575)
|.|+...-.++++++
T Consensus 233 -~vDan~~~~~~eai~ 247 (428)
T 3bjs_A 233 -LTDANTAYTMADARR 247 (428)
T ss_dssp -EEECTTCCCHHHHHH
T ss_pred -EEECCCCCCHHHHHH
Confidence 468876556677665
No 87
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=59.09 E-value=56 Score=33.41 Aligned_cols=51 Identities=14% Similarity=0.251 Sum_probs=40.7
Q ss_pred HhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcCceeeee
Q 042063 419 TKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFI 471 (575)
Q Consensus 419 ~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~I 471 (575)
.+-.++|++.. +..+.+.+||. .|...|++.++...|.+.|.+.|.-+--|
T Consensus 198 ~eiv~avr~~v-~~pv~vRls~~-~~~~~g~~~~~~~~la~~L~~~Gvd~i~v 248 (340)
T 3gr7_A 198 GEVIDAVREVW-DGPLFVRISAS-DYHPDGLTAKDYVPYAKRMKEQGVDLVDV 248 (340)
T ss_dssp HHHHHHHHHHC-CSCEEEEEESC-CCSTTSCCGGGHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhc-CCceEEEeccc-cccCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 45666778777 77899999996 67777899999999999999999554333
No 88
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.54 E-value=11 Score=39.28 Aligned_cols=28 Identities=11% Similarity=0.004 Sum_probs=22.0
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
+-+++.-++.++-.|+.+.+ |.++|.++
T Consensus 145 ~~~Vivg~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 145 NIDVIVGNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp CCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCcEEEccCCCHHHHHHHHHcCcCEEEEe
Confidence 56676668889888887665 89999984
No 89
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=58.26 E-value=5.8 Score=40.45 Aligned_cols=155 Identities=16% Similarity=0.155 Sum_probs=86.8
Q ss_pred CCceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCC---CCCC-CCcCcHHHHHHHHHHHhh----h
Q 042063 77 GTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGP---DLAD-YPYDTVPNKVEHLFFAQQ----Y 143 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~P---D~~~-~p~~tv~~~v~rI~~aq~----~ 143 (575)
-+..++-.++|+-++..+++..+.+.+.+..+-.. ++ ..+.| --+. .++.++.+.|+.|..+-. .
T Consensus 87 ~Glp~~tev~d~~~v~~l~~~vd~lkIgA~~~~n~~LLr~~a--~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~ 164 (288)
T 3tml_A 87 LGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACA--RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLS 164 (288)
T ss_dssp HCCCEEEECCSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHH--TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCC
T ss_pred cCCeEEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHH--ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCC
Confidence 36778889999999876666788888888443211 01 23444 2244 478899999998864210 0
Q ss_pred hHHHHHHHHh-hccH-----hhhhc--CCCCCCCCceeeeCCCC-----------CCCchHHHHHHHHHHHcCceEEEec
Q 042063 144 HDRKQREARM-SMSR-----EERAR--TPCVDYLKPIIADGDTG-----------FGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 144 hDr~q~~~r~-~~~~-----e~~~~--~~~vd~~lPIIAD~DtG-----------fGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
+++.---+|- +.+. .-++. ... +.+||+.|.|+. -|...-|..+.+.-+.+||.|+.||
T Consensus 165 ~~~i~L~erg~~y~~~~~~vdl~~i~~lk~--~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE 242 (288)
T 3tml_A 165 EDRFMACERGVSFGYNNLVSDMRSLAIMRE--TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFME 242 (288)
T ss_dssp SCCEEEEECCEECSSSCEECCHHHHHHGGG--GSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEE
T ss_pred CCcEEEEeCCCCCCCCcCcCCHHHHHHHHh--cCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEe
Confidence 0000000000 0000 00000 001 349999999886 2556667888999999999999998
Q ss_pred cCCCcccccCCCCCCcccCHH---HHHHHHHHHHHh
Q 042063 205 DQSSVTKKCGHMAGKVLVAIS---EHINRLVAARLQ 237 (575)
Q Consensus 205 DQ~~~~KkCGH~~Gk~Lvp~~---E~v~RL~AAR~a 237 (575)
=-- .|.|-- .+++.-++++ ++++.|+.+..+
T Consensus 243 ~H~-~pd~al-~D~~~sl~p~el~~lv~~ir~i~~a 276 (288)
T 3tml_A 243 THP-NPAEAK-SDGPNAVPLNRMGALLETLVTLDQA 276 (288)
T ss_dssp EES-SGGGCS-SCGGGCEEGGGHHHHHHHHHHHHHH
T ss_pred ecc-ChhhcC-CchhhcCCHHHHHHHHHHHHHHHHH
Confidence 653 232221 1555555544 455555554433
No 90
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=57.68 E-value=9.3 Score=42.21 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=29.9
Q ss_pred CCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCce
Q 042063 400 APHADLIWMETASPDLAECTKFAGGIKSKHPEIM 433 (575)
Q Consensus 400 apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~ 433 (575)
.+.+|++++|| -|++.+|+.-.+.+++.+|++.
T Consensus 137 ~~gvD~l~~ET-~~~~~Ea~aa~~a~~~~~~~~P 169 (566)
T 1q7z_A 137 EEGVDGIIFET-FSDILELKAAVLAAREVSRDVF 169 (566)
T ss_dssp HTTCSEEEEEE-ECCHHHHHHHHHHHHHHCSSSC
T ss_pred hCCCCEEEEec-cCCHHHHHHHHHHHHHhCCCCc
Confidence 67899999999 8999999999999999888763
No 91
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=56.64 E-value=12 Score=39.16 Aligned_cols=27 Identities=4% Similarity=-0.092 Sum_probs=20.4
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEee
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYV 103 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~ 103 (575)
+-+++.-++.++-.|+.+.+ |.++|.+
T Consensus 149 ~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 149 HLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp TCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred CCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 34555556999998887665 8999998
No 92
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=56.44 E-value=32 Score=35.31 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=54.4
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+-+=. |.+++....+.++++.++|..+|-| |+|| ++++-+++|+++|.+. |+|+-|
T Consensus 135 v~~~~~~--~~~~~~~~~~~a~~~~~~Gf~~iKi--------k~g~-------~~~~~~e~v~avr~a~---g~d~~l-- 192 (379)
T 2rdx_A 135 APMYRVA--PQRSEAETRAELARHRAAGYRQFQI--------KVGA-------DWQSDIDRIRACLPLL---EPGEKA-- 192 (379)
T ss_dssp EEBCEEC--CCSCSHHHHHHHHHHHHTTCCEEEE--------ECCS-------CHHHHHHHHHHHGGGS---CTTCEE--
T ss_pred eeEEEEe--cCCCHHHHHHHHHHHHHcCCCEEEE--------eccC-------CHHHHHHHHHHHHHhc---CCCCEE--
Confidence 4554322 4457888889999999999999987 4555 5688899999998654 777766
Q ss_pred eecccccCchHHHHHHHHHh
Q 042063 250 RTDAEAATLIQTNVDTRDHQ 269 (575)
Q Consensus 250 RTDA~~a~~l~~aId~R~~a 269 (575)
|.|+...-.++++++ -.+.
T Consensus 193 ~vDan~~~~~~~a~~-~~~~ 211 (379)
T 2rdx_A 193 MADANQGWRVDNAIR-LARA 211 (379)
T ss_dssp EEECTTCSCHHHHHH-HHHH
T ss_pred EEECCCCCCHHHHHH-HHHH
Confidence 457765555677666 4444
No 93
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=56.10 E-value=37 Score=34.61 Aligned_cols=70 Identities=16% Similarity=0.282 Sum_probs=52.3
Q ss_pred CCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCc
Q 042063 179 GFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATL 258 (575)
Q Consensus 179 GfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~ 258 (575)
|.|.+..+.+.++++.+.|..+|-| |+|| +.++-+++|+++|.+. |+|+-| |.|+...-.
T Consensus 138 ~~~~~~~~~~~a~~~~~~Gf~~iKi--------k~g~-------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~~ 197 (369)
T 2p8b_A 138 SIADPENMAEEAASMIQKGYQSFKM--------KVGT-------NVKEDVKRIEAVRERV---GNDIAI--RVDVNQGWK 197 (369)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEE--------ECCS-------CHHHHHHHHHHHHHHH---CTTSEE--EEECTTTTB
T ss_pred cCCChHHHHHHHHHHHHcCcCEEEE--------EeCC-------CHHHHHHHHHHHHHHh---CCCCeE--EEECCCCCC
Confidence 4456777888899999999999887 3443 4788899999999764 778766 788876556
Q ss_pred hHHHH-HHHHHh
Q 042063 259 IQTNV-DTRDHQ 269 (575)
Q Consensus 259 l~~aI-d~R~~a 269 (575)
.++++ + ..+.
T Consensus 198 ~~~a~~~-~~~~ 208 (369)
T 2p8b_A 198 NSANTLT-ALRS 208 (369)
T ss_dssp SHHHHHH-HHHT
T ss_pred HHHHHHH-HHHH
Confidence 67777 6 4444
No 94
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=55.61 E-value=40 Score=34.06 Aligned_cols=65 Identities=22% Similarity=0.223 Sum_probs=48.6
Q ss_pred CCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCc
Q 042063 179 GFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATL 258 (575)
Q Consensus 179 GfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~ 258 (575)
|.|++..+.+.++++.+.|-.+|-| |+|| +.++-+++|+|+|.+ |+|+-| |.|+...-.
T Consensus 136 ~~~~~~~~~~~a~~~~~~Gf~~iKi--------k~g~-------~~~~d~~~v~avr~~----g~~~~l--~vDan~~~~ 194 (345)
T 2zad_A 136 GIDTVENRVKEAKKIFEEGFRVIKI--------KVGE-------NLKEDIEAVEEIAKV----TRGAKY--IVDANMGYT 194 (345)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEE--------ECCS-------CHHHHHHHHHHHHHH----STTCEE--EEECTTCSC
T ss_pred cCCCHHHHHHHHHHHHHcCcCEEEE--------eecC-------CHHHHHHHHHHHHhh----CCCCeE--EEECCCCCC
Confidence 4467777888899999999999886 3444 567788999999854 677766 669876656
Q ss_pred hHHHHH
Q 042063 259 IQTNVD 264 (575)
Q Consensus 259 l~~aId 264 (575)
++++++
T Consensus 195 ~~~a~~ 200 (345)
T 2zad_A 195 QKEAVE 200 (345)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 676665
No 95
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=54.92 E-value=19 Score=32.56 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=57.0
Q ss_pred CcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccC--CCCHHHHHhhHHHH-HhcCceeeeecchhhh
Q 042063 403 ADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDAS--GMTDEEMKDFIPRI-AKLGFCWQFITLAGFH 477 (575)
Q Consensus 403 aDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~--G~s~~~i~~F~~~L-~~~G~~~Q~ItLaG~H 477 (575)
.-++++..+....+...+|++.| +.+|+..-+|..++.||.-.. .=+.+++..|+.++ .+++ +-.+-|+--++
T Consensus 64 ~a~v~v~v~~~~~~~~~~~~~~l-~~~peV~~~~~vtG~~D~~l~v~~~d~~~l~~~l~~~l~~~~-V~~~~T~ivl~ 139 (162)
T 3i4p_A 64 TVFVSIRTASHSIEWLKRFSEVV-SEFPEVVEFYRMSGDVDYLLRVVVPDIAAYDAFYKRMIAKIE-IRDVSSAFAME 139 (162)
T ss_dssp EEEEEEECCSCCHHHHHHHHHHH-HHCTTEEEEEECCSSCSEEEEEEESSHHHHHHHHHHHHHHCC-CSEEEEEECSC
T ss_pred EEEEEEEEcCCChHHHHHHHHHH-hcCCCEEEeeecCCCCCEEEEEEECCHHHHHHHHHHHhhcCC-eeEEEEEEEEE
Confidence 45888988877777788999999 468999999999999997543 12678999999875 8888 77766655443
No 96
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=54.60 E-value=72 Score=30.80 Aligned_cols=81 Identities=15% Similarity=0.053 Sum_probs=48.6
Q ss_pred CceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q 042063 78 TASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMS 156 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~ 156 (575)
+..++.++++.-.+..+.+ |++.|-++-.+ +.+.+ .+...-.+.+++|.+
T Consensus 129 g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g-----------~t~~~-~~~~~~~~li~~l~~----------------- 179 (229)
T 3q58_A 129 GLLAMADCSTVNEGISCHQKGIEFIGTTLSG-----------YTGPI-TPVEPDLAMVTQLSH----------------- 179 (229)
T ss_dssp TCEEEEECSSHHHHHHHHHTTCSEEECTTTT-----------SSSSC-CCSSCCHHHHHHHHT-----------------
T ss_pred CCEEEEecCCHHHHHHHHhCCCCEEEecCcc-----------CCCCC-cCCCCCHHHHHHHHH-----------------
Confidence 6788889999988876655 89988643211 11111 011111345555531
Q ss_pred HhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 157 REERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 157 ~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
. + +|||+.+ |..++ +.++++.++||.||-+=
T Consensus 180 --------~-~--ipvIA~G--GI~t~----~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 180 --------A-G--CRVIAEG--RYNTP----ALAANAIEHGAWAVTVG 210 (229)
T ss_dssp --------T-T--CCEEEES--SCCSH----HHHHHHHHTTCSEEEEC
T ss_pred --------c-C--CCEEEEC--CCCCH----HHHHHHHHcCCCEEEEc
Confidence 2 4 9999874 44444 44566678899999873
No 97
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=54.37 E-value=10 Score=39.24 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=66.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
+.....++++.+++.|+.||-+ ||+.|--...+.+|..+=+++ +.. | ..-||+=+ ++....+
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v---------~GtTGE~~~Ls~eEr~~vi~~---~~~--g-rvpViaGv---g~~st~e 106 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVY---------CGSMGDWPLLTDEQRMEGVER---LVK--A-GIPVIVGT---GAVNTAS 106 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE---------SSGGGTGGGSCHHHHHHHHHH---HHH--T-TCCEEEEC---CCSSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe---------CccCcChhhCCHHHHHHHHHH---HhC--C-CCcEEEec---CCCCHHH
Confidence 5677899999999999999876 444444567788888776666 221 2 34455555 3345777
Q ss_pred HHHHHHHhh-hhccCC-----CCCCcchHHHHHHHHHHCCCCHHHHHHHHHHHHh---cCCcccccH
Q 042063 262 NVDTRDHQF-ILGVTN-----PNLRGKALASILAEAMAAGKTGAELQAIEDNWIA---MAGLKTFSE 319 (575)
Q Consensus 262 aId~R~~aY-i~Gat~-----~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~W~~---~~~l~tf~e 319 (575)
+|+ ..+.. ..|+.. |... ++.+.++|.+.-++-.+ ..||+.|+-
T Consensus 107 ai~-la~~A~~~Gadavlv~~P~y~-------------~~~s~~~l~~~f~~IA~aa~~lPiilYn~ 159 (344)
T 2hmc_A 107 AVA-HAVHAQKVGAKGLMVIPRVLS-------------RGSVIAAQKAHFKAILSAAPEIPAVIYNS 159 (344)
T ss_dssp HHH-HHHHHHHHTCSEEEECCCCSS-------------STTCHHHHHHHHHHHHHHSTTSCEEEEEB
T ss_pred HHH-HHHHHHhcCCCEEEECCCccC-------------CCCCHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 887 55544 356532 2221 11356677776666655 468887763
No 98
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=53.10 E-value=14 Score=36.36 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=25.8
Q ss_pred CceeeeCCCCCCCc---hHHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGT---TATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~---~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+||++ .+|=++ ..+.+.++.+.++||.||.+=|-.
T Consensus 95 ~Pv~l---m~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~ 132 (268)
T 1qop_A 95 IPIGL---LMYANLVFNNGIDAFYARCEQVGVDSVLVADVP 132 (268)
T ss_dssp SCEEE---EECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC
T ss_pred CCEEE---EEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC
Confidence 89987 243332 123688999999999999997764
No 99
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=52.74 E-value=48 Score=33.59 Aligned_cols=74 Identities=12% Similarity=0.145 Sum_probs=53.1
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+.+= -|++++..+.+.++++.++|..+|-| |+|| -+.++-+++|+++|.+. |+|+-|
T Consensus 134 vp~~~~--~g~~~~~~~~~~a~~~~~~Gf~~iKi--------k~g~------~~~~~~~e~v~avr~a~---g~~~~l-- 192 (359)
T 1mdl_A 134 VQAYDS--HSLDGVKLATERAVTAAELGFRAVKT--------RIGY------PALDQDLAVVRSIRQAV---GDDFGI-- 192 (359)
T ss_dssp EEEEEE--CCSCHHHHHHHHHHHHHHTTCSEEEE--------ECCC------SSHHHHHHHHHHHHHHH---CSSSEE--
T ss_pred eeeeee--cCCCCHHHHHHHHHHHHHcCCCEEEE--------ecCC------CCHHHHHHHHHHHHHHh---CCCCEE--
Confidence 677653 35566777788899999999999887 3454 14577889999999765 777766
Q ss_pred eecccccCchHHHHH
Q 042063 250 RTDAEAATLIQTNVD 264 (575)
Q Consensus 250 RTDA~~a~~l~~aId 264 (575)
|.|+...-..+++++
T Consensus 193 ~vDan~~~~~~~a~~ 207 (359)
T 1mdl_A 193 MVDYNQSLDVPAAIK 207 (359)
T ss_dssp EEECTTCSCHHHHHH
T ss_pred EEECCCCCCHHHHHH
Confidence 568775555666655
No 100
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=51.92 E-value=16 Score=37.83 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=28.2
Q ss_pred HHHHHHHhhhhC--CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 65 KLWRTLKTHQAN--GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 65 kL~~lL~~~~~~--~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
.+++.++.+.+. +-++++-++.++-.|+.+.+ |.++|.+|
T Consensus 147 ~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEEC
Confidence 345555554443 45777778999888887665 89999886
No 101
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=51.37 E-value=16 Score=38.95 Aligned_cols=29 Identities=14% Similarity=0.055 Sum_probs=22.9
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeech
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSG 105 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG 105 (575)
+-|++..++.++-.|..+.+ |.++|-+|+
T Consensus 278 ~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 278 DLPVVAGNVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp TSCEEEEEECSHHHHHHHHHTTCSEEEECS
T ss_pred CceEEeCCcCCHHHHHHHHHcCCCEEEEcC
Confidence 46777788888888877665 899999865
No 102
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=50.61 E-value=21 Score=38.82 Aligned_cols=27 Identities=4% Similarity=-0.082 Sum_probs=21.5
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEee
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYV 103 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~ 103 (575)
+.+++.-++.++-.|+.+.+ |.++|-+
T Consensus 297 ~~~vi~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 297 SLNIIAGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp TSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred CceEEeeeeccHHHHHHHHHhCCCEEEE
Confidence 35778778999988887665 8999987
No 103
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=50.46 E-value=12 Score=38.34 Aligned_cols=150 Identities=17% Similarity=0.138 Sum_probs=84.3
Q ss_pred CCceeecCCCCHHHHHHHHccCCeEeechHHHhhc-----cCCCCCCCC---CCCC-CCcCcHHHHHHHHHHHh-----h
Q 042063 77 GTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSST-----HTSTNEPGP---DLAD-YPYDTVPNKVEHLFFAQ-----Q 142 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~gf~AIy~SG~~vAa~-----~~~~~~g~P---D~~~-~p~~tv~~~v~rI~~aq-----~ 142 (575)
-+..++-.++|+-++..+++..+.+.+.+..+-.. ++ ..+.| --+. .+++++.+.|+.|..+- +
T Consensus 111 ~GLpv~Tev~D~~~v~~l~~~vd~lkIgA~~~~n~~LLr~va--~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL 188 (298)
T 3fs2_A 111 YGFPVLTDIHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAA--RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLA 188 (298)
T ss_dssp HCCCEEEECCSHHHHHHHTTTCSEEEECGGGTTCHHHHHHHH--HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEE
T ss_pred cCCeEEEEeCCHHHHHHHHhhCCEEEECccccCCHHHHHHHH--ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 36777789999999876666788888888432110 00 12333 2233 47788889998885320 0
Q ss_pred hhHHHHHHHHhhccHh-----hhhcCCCCCCCCceeeeCCCC-----------CCCchHHHHHHHHHHHcCceEEEeccC
Q 042063 143 YHDRKQREARMSMSRE-----ERARTPCVDYLKPIIADGDTG-----------FGGTTATVKLCKLFVERGAAGVHIEDQ 206 (575)
Q Consensus 143 ~hDr~q~~~r~~~~~e-----~~~~~~~vd~~lPIIAD~DtG-----------fGg~~nv~~lvk~~ieAGaAGIhIEDQ 206 (575)
.|=- .+.+.+ -++....-.+.+||++|.|.. -|...-|..+.+.-+.+||.|+.||=-
T Consensus 189 ~erg------~~y~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H 262 (298)
T 3fs2_A 189 TERG------VSFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETH 262 (298)
T ss_dssp EECC------EECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEE
T ss_pred EECC------CCCCCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEec
Confidence 0000 000000 000000001349999998876 355666788899999999999999965
Q ss_pred CCcccccCCCCCCcccCHH---HHHHHHHHHHH
Q 042063 207 SSVTKKCGHMAGKVLVAIS---EHINRLVAARL 236 (575)
Q Consensus 207 ~~~~KkCGH~~Gk~Lvp~~---E~v~RL~AAR~ 236 (575)
- .|.|.- .+++.-++++ ++++.|+.+..
T Consensus 263 ~-tpd~al-~D~~~sl~p~el~~lv~~ir~i~~ 293 (298)
T 3fs2_A 263 E-DPDNAP-SDGPNMVPIDKMPALLEKLMAFDR 293 (298)
T ss_dssp S-SGGGCS-SSGGGCEEGGGHHHHHHHHHHHHH
T ss_pred C-ChhccC-CchhhcCCHHHHHHHHHHHHHHHH
Confidence 3 232221 1555545544 55555555443
No 104
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=50.38 E-value=47 Score=34.06 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=51.3
Q ss_pred ceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCC--CCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhc
Q 042063 79 ASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLA--DYPYDTVPNKVEHLFFAQQYHDRKQREARMSM 155 (575)
Q Consensus 79 ~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~--~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~ 155 (575)
..+...+.++-.|....+ |.++|-++|.......+ ...|+.. ..|.. ....+.+|.+
T Consensus 146 ~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g---~~~~~~~~~~~~~~-~~~~l~~i~~---------------- 205 (369)
T 3bw2_A 146 TLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQG---THRDSSEDDGAGIG-LLSLLAQVRE---------------- 205 (369)
T ss_dssp CEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECC---CSSCCGGGTTCCCC-HHHHHHHHHH----------------
T ss_pred CeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCC---Cccccccccccccc-HHHHHHHHHH----------------
Confidence 455667888888776554 89999997643211100 1112110 00122 3455555532
Q ss_pred cHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccC
Q 042063 156 SREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQ 206 (575)
Q Consensus 156 ~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ 206 (575)
.++ +|||+++ |.+++.+ +..++++||.||.+-=.
T Consensus 206 ---------~~~--iPViaaG--GI~~~~~----~~~~l~~GAd~V~vGs~ 239 (369)
T 3bw2_A 206 ---------AVD--IPVVAAG--GIMRGGQ----IAAVLAAGADAAQLGTA 239 (369)
T ss_dssp ---------HCS--SCEEEES--SCCSHHH----HHHHHHTTCSEEEESHH
T ss_pred ---------hcC--ceEEEEC--CCCCHHH----HHHHHHcCCCEEEEChH
Confidence 145 9999985 4445544 45566699999997543
No 105
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=50.35 E-value=43 Score=34.65 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=24.3
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeechHH
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSGWQ 107 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~ 107 (575)
+.|+++-++.++-.|..+.+ |.++|-+|+.+
T Consensus 225 ~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~g 256 (370)
T 1gox_A 225 SLPILVKGVITAEDARLAVQHGAAGIIVSNHG 256 (370)
T ss_dssp CSCEEEECCCSHHHHHHHHHTTCSEEEECCGG
T ss_pred CCCEEEEecCCHHHHHHHHHcCCCEEEECCCC
Confidence 56777778999888876555 89999998744
No 106
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=50.32 E-value=44 Score=33.85 Aligned_cols=84 Identities=17% Similarity=0.170 Sum_probs=50.5
Q ss_pred CceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q 042063 78 TASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMS 156 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~ 156 (575)
+..+.+.+.++-.|..+.+ |.++|.++|..... ..| . . .-.+.+.+|.+
T Consensus 124 g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG-----~~G----~-~---~~~~ll~~i~~----------------- 173 (326)
T 3bo9_A 124 GTKVIPVVASDSLARMVERAGADAVIAEGMESGG-----HIG----E-V---TTFVLVNKVSR----------------- 173 (326)
T ss_dssp TCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSE-----ECC----S-S---CHHHHHHHHHH-----------------
T ss_pred CCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCc-----cCC----C-c---cHHHHHHHHHH-----------------
Confidence 4556678888877776554 89999998743211 112 1 1 12344455432
Q ss_pred HhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 157 REERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 157 ~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
.++ +|||+++ |.++..++. .++++||.||.+==-.
T Consensus 174 --------~~~--iPviaaG--GI~~~~dv~----~al~~GA~gV~vGs~~ 208 (326)
T 3bo9_A 174 --------SVN--IPVIAAG--GIADGRGMA----AAFALGAEAVQMGTRF 208 (326)
T ss_dssp --------HCS--SCEEEES--SCCSHHHHH----HHHHHTCSEEEESHHH
T ss_pred --------HcC--CCEEEEC--CCCCHHHHH----HHHHhCCCEEEechHH
Confidence 245 9999986 444555554 4445899999885443
No 107
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=49.18 E-value=82 Score=32.77 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=28.7
Q ss_pred CCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccC
Q 042063 166 VDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQ 206 (575)
Q Consensus 166 vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ 206 (575)
++ +||++-. .|+|-. .+.++.++++||.+|.+--.
T Consensus 186 ~~--vPVivK~-vG~g~s---~~~A~~l~~aGad~I~V~g~ 220 (368)
T 3vkj_A 186 LS--VPIIVKE-SGNGIS---METAKLLYSYGIKNFDTSGQ 220 (368)
T ss_dssp CS--SCEEEEC-SSSCCC---HHHHHHHHHTTCCEEECCCB
T ss_pred cC--CCEEEEe-CCCCCC---HHHHHHHHhCCCCEEEEeCC
Confidence 55 9999998 888753 47789999999999997543
No 108
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=48.63 E-value=32 Score=37.08 Aligned_cols=26 Identities=15% Similarity=0.057 Sum_probs=21.2
Q ss_pred CceeecCCCCHHHHHHHHc-cCCeEee
Q 042063 78 TASRTFGALDPVQVTMMAK-HLDSIYV 103 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~-gf~AIy~ 103 (575)
-++++-++.++-+|..+.+ |.++|-+
T Consensus 285 ~~Vi~G~V~t~~~a~~l~~aGad~I~V 311 (503)
T 1me8_A 285 VKVGAGNIVDGEGFRYLADAGADFIKI 311 (503)
T ss_dssp SCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred ceEeeccccCHHHHHHHHHhCCCeEEe
Confidence 5777888999988887665 8999887
No 109
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=48.24 E-value=92 Score=31.45 Aligned_cols=57 Identities=18% Similarity=0.210 Sum_probs=37.3
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhh
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFD 239 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d 239 (575)
+|||+ |.|.|.+.. +....+.||.||-+-=-.. .++.+..=.+.|+.-+.|-|.+..
T Consensus 179 vPVI~--~GGI~tpsD----Aa~AmeLGAdgVlVgSAI~-------~a~dP~~ma~af~~Av~agr~a~~ 235 (268)
T 2htm_A 179 PPVVV--DAGLGLPSH----AAEVMELGLDAVLVNTAIA-------EAQDPPAMAEAFRLAVEAGRKAYL 235 (268)
T ss_dssp SCBEE--ESCCCSHHH----HHHHHHTTCCEEEESHHHH-------TSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEE--eCCCCCHHH----HHHHHHcCCCEEEEChHHh-------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 89998 578887755 4566789999997754331 122233335677777777777654
No 110
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=48.12 E-value=35 Score=36.78 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=21.6
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
+-+++..++.++-.|+.+.+ |.++|-++
T Consensus 270 ~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 270 DVQVIGGNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp TSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CceEEEeeeCcHHHHHHHHHcCCCEEEEC
Confidence 34677767999988887665 89999874
No 111
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=47.86 E-value=1.2e+02 Score=29.32 Aligned_cols=81 Identities=15% Similarity=0.082 Sum_probs=48.3
Q ss_pred CceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q 042063 78 TASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMS 156 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~ 156 (575)
+..++.++++.-.+..+.+ |++.|-++-.+... .+.+. ..-++.++++.+
T Consensus 129 g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~------~~~~~------~~~~~~i~~l~~----------------- 179 (232)
T 3igs_A 129 HLLTMADCSSVDDGLACQRLGADIIGTTMSGYTT------PDTPE------EPDLPLVKALHD----------------- 179 (232)
T ss_dssp TCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSS------SSCCS------SCCHHHHHHHHH-----------------
T ss_pred CCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCC------CCCCC------CCCHHHHHHHHh-----------------
Confidence 6778889999988876655 89988543211110 00110 111345555531
Q ss_pred HhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 157 REERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 157 ~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
. + +|||+.+ |..++ +.++++.++||.||-+=
T Consensus 180 --------~-~--ipvIA~G--GI~t~----~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 180 --------A-G--CRVIAEG--RYNSP----ALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp --------T-T--CCEEEES--CCCSH----HHHHHHHHTTCSEEEEC
T ss_pred --------c-C--CcEEEEC--CCCCH----HHHHHHHHcCCCEEEEe
Confidence 2 4 9999874 43344 44566678899999874
No 112
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=46.99 E-value=26 Score=34.40 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=45.6
Q ss_pred eeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEee
Q 042063 173 IADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVART 251 (575)
Q Consensus 173 IAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiART 251 (575)
|.=.|+|.||.+-..++.+.+= +..-+++-|+...|- + ..+.++..+++..+-......|.|+++||=.
T Consensus 6 IgvfDSGvGGltv~~~i~~~lP--~~~~iy~~D~~~~Py-----g---~~s~~~i~~~~~~~~~~L~~~g~d~iviaCN 74 (267)
T 2gzm_A 6 IGVIDSGVGGLTVAKELIRQLP--KERIIYLGDTARCPY-----G---PRSREEVRQFTWEMTEHLLDLNIKMLVIACN 74 (267)
T ss_dssp EEEEESSSTTHHHHHHHHHHCT--TSCEEEEECTTTCCC-----T---TSCHHHHHHHHHHHHHHHHTTTCSEEEECCH
T ss_pred EEEEeCCccHHHHHHHHHHHCC--CCCEEEecCCCCCCC-----C---CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCc
Confidence 3347899999875544444432 667899999974331 1 2357788888776655444468999888744
No 113
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=46.04 E-value=48 Score=34.26 Aligned_cols=77 Identities=18% Similarity=0.153 Sum_probs=54.0
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+.+=. |.+++..+.+.++++.++|-.+|-| |+|+ ++++-+++|+++|.+. |+|+-|
T Consensus 135 vp~~~~~--g~~~~e~~~~~a~~~~~~Gf~~vKi--------k~g~-------~~~~~~e~v~avR~a~---g~d~~l-- 192 (397)
T 2qde_A 135 IPLGLVL--GAGEPEAVAEEALAVLREGFHFVKL--------KAGG-------PLKADIAMVAEVRRAV---GDDVDL-- 192 (397)
T ss_dssp EEBCEEC--CCSCHHHHHHHHHHHHHHTCSCEEE--------ECCS-------CHHHHHHHHHHHHHHH---CTTSCE--
T ss_pred cceEEEC--CCCCHHHHHHHHHHHHHhhhhheee--------cccC-------CHHHHHHHHHHHHHhh---CCCCEE--
Confidence 5554332 5567777888899999999888876 2332 5577889999999764 777766
Q ss_pred eecccccCchHHHHHHHHHh
Q 042063 250 RTDAEAATLIQTNVDTRDHQ 269 (575)
Q Consensus 250 RTDA~~a~~l~~aId~R~~a 269 (575)
|.|+...-.++++++ ..+.
T Consensus 193 ~vDan~~~~~~~a~~-~~~~ 211 (397)
T 2qde_A 193 FIDINGAWTYDQALT-TIRA 211 (397)
T ss_dssp EEECTTCCCHHHHHH-HHHH
T ss_pred EEECCCCCCHHHHHH-HHHH
Confidence 788876556777766 4443
No 114
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=45.15 E-value=40 Score=34.20 Aligned_cols=77 Identities=6% Similarity=0.024 Sum_probs=43.0
Q ss_pred ccCCCCCCCCCCCHHHHHHh---hCC----ccccCCc---hHHHH-H---HHHHHHhhhh-CCCceeecCC---CCHHHH
Q 042063 30 NSERFRLTRRPYSARDVVAL---RGS----LRQSYGS---NEMAK-K---LWRTLKTHQA-NGTASRTFGA---LDPVQV 91 (575)
Q Consensus 30 ~~~R~~~i~R~Yta~~v~~~---rgs----~~~~y~~---~~~A~-k---L~~lL~~~~~-~~~~l~~~Ga---~D~~sA 91 (575)
..|-+-++.+.|+.+++.+. -|- +.+..|. +.... . +++.+++..+ -+.|+++-++ +|+-.|
T Consensus 116 ~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a 195 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASA 195 (349)
T ss_dssp SSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHH
T ss_pred CceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHH
Confidence 45777778888888776642 221 1122221 11111 1 3455554432 2567777543 888888
Q ss_pred HHHHc-cCCeEeechH
Q 042063 92 TMMAK-HLDSIYVSGW 106 (575)
Q Consensus 92 ~~~a~-gf~AIy~SG~ 106 (575)
..+.+ |.++|-+|+.
T Consensus 196 ~~a~~~Gad~I~v~~~ 211 (349)
T 1p0k_A 196 GKLYEAGAAAVDIGGY 211 (349)
T ss_dssp HHHHHHTCSEEEEEC-
T ss_pred HHHHHcCCCEEEEcCC
Confidence 76555 8999999864
No 115
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=44.95 E-value=31 Score=33.93 Aligned_cols=34 Identities=24% Similarity=0.418 Sum_probs=25.6
Q ss_pred CceeeeCCCCCCCchH---HHHHHHHHHHcCceEEEeccC
Q 042063 170 KPIIADGDTGFGGTTA---TVKLCKLFVERGAAGVHIEDQ 206 (575)
Q Consensus 170 lPIIAD~DtGfGg~~n---v~~lvk~~ieAGaAGIhIEDQ 206 (575)
+||++ .||=|+.. +.+.++...++|+.|+.+=|-
T Consensus 95 ~Pi~~---m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl 131 (262)
T 2ekc_A 95 IPFLL---MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDL 131 (262)
T ss_dssp SCEEE---ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTC
T ss_pred CCEEE---EecCcHHHHhhHHHHHHHHHHcCCCEEEECCC
Confidence 89999 45555422 257789999999999999653
No 116
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=44.91 E-value=49 Score=33.77 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=55.2
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+.+=. |.|++..+.+.++++.++|..+|-| |+|+ +.++-+++|+++|.+. |+|+-|
T Consensus 136 vp~~~~~--~~~~~~~~~~~a~~~~~~Gf~~iKi--------k~g~-------~~~~~~e~v~avr~a~---g~~~~l-- 193 (371)
T 2ps2_A 136 LPLISSI--YVGEPEDMRARVAKYRAKGYKGQSV--------KISG-------EPVTDAKRITAALANQ---QPDEFF-- 193 (371)
T ss_dssp EEBEEEE--CSCCHHHHHHHHHHHHTTTCCEEEE--------ECCS-------CHHHHHHHHHHHTTTC---CTTCEE--
T ss_pred eEEEEEe--CCCCHHHHHHHHHHHHHhChheEEe--------ecCC-------CHHHHHHHHHHHHHhc---CCCCEE--
Confidence 5554422 3457778888899999999998886 3443 4788889999998653 778766
Q ss_pred eecccccCchHHHHHHHHHhh
Q 042063 250 RTDAEAATLIQTNVDTRDHQF 270 (575)
Q Consensus 250 RTDA~~a~~l~~aId~R~~aY 270 (575)
|.|+...-.++++++ -.+..
T Consensus 194 ~vDan~~~~~~~a~~-~~~~l 213 (371)
T 2ps2_A 194 IVDANGKLSVETALR-LLRLL 213 (371)
T ss_dssp EEECTTBCCHHHHHH-HHHHS
T ss_pred EEECCCCcCHHHHHH-HHHHH
Confidence 778876656777776 44444
No 117
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=44.74 E-value=86 Score=29.49 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=50.7
Q ss_pred HHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeE--eechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHh
Q 042063 65 KLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSI--YVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQ 141 (575)
Q Consensus 65 kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AI--y~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq 141 (575)
.+-+.+++.. ++..+..++.++-.+....+ |.+.| -+.|.. . . ..+. .+.+ .+.++++.+
T Consensus 122 ~~i~~i~~~~--~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~--~---~-~~~~-----~~~~--~~~i~~~~~-- 184 (234)
T 1yxy_A 122 SFIRQVKEKY--PNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYT--P---Y-SRQE-----AGPD--VALIEALCK-- 184 (234)
T ss_dssp HHHHHHHHHC--TTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSS--T---T-SCCS-----SSCC--HHHHHHHHH--
T ss_pred HHHHHHHHhC--CCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccC--C---C-CcCC-----CCCC--HHHHHHHHh--
Confidence 3444444443 24567778998888765444 78888 444421 1 0 1111 1111 244444421
Q ss_pred hhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 142 QYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 142 ~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
. + +||++++ |-.++ +.++.+.++||.||.+=
T Consensus 185 -----------------------~-~--ipvia~G--GI~s~----~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 185 -----------------------A-G--IAVIAEG--KIHSP----EEAKKINDLGVAGIVVG 215 (234)
T ss_dssp -----------------------T-T--CCEEEES--CCCSH----HHHHHHHTTCCSEEEEC
T ss_pred -----------------------C-C--CCEEEEC--CCCCH----HHHHHHHHCCCCEEEEc
Confidence 2 4 9999985 33333 55667788999999763
No 118
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=44.33 E-value=29 Score=33.70 Aligned_cols=67 Identities=21% Similarity=0.235 Sum_probs=43.5
Q ss_pred CCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeec
Q 042063 176 GDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTD 252 (575)
Q Consensus 176 ~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTD 252 (575)
.|+|.||.+-..++.+.+ - ...-+++-|+...|- | ..+.++..+++..+.......|.|.++||=.-
T Consensus 6 fDSG~Ggltv~~~l~~~~-P-~~~~iy~~D~~~~py------G--~~s~~~i~~~~~~~~~~L~~~g~d~iviaCnT 72 (254)
T 1b73_A 6 FDSGVGGLTVLKAIRNRY-R-KVDIVYLGDTARVPY------G--IRSKDTIIRYSLECAGFLKDKGVDIIVVACNT 72 (254)
T ss_dssp EESSSGGGTHHHHHHHHS-T-TCEEEEEECTTTCCC------T--TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHH
T ss_pred EECCccHHHHHHHHHHhC-C-CCcEEEeecCCCCCC------C--cCCHHHHHHHHHHHHHHHHHCCCCEEEEeCch
Confidence 489999987444444333 2 556899999974331 2 34577888887766554444689998887543
No 119
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=44.00 E-value=80 Score=32.05 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=49.4
Q ss_pred CCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCc
Q 042063 179 GFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATL 258 (575)
Q Consensus 179 GfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~ 258 (575)
|.|++..+.+.++++.+.|..+|-| |+|| -+.++-+++|+++|.+. |+++-| |.|+...-.
T Consensus 137 ~~~~~~~~~~~a~~~~~~Gf~~iKi--------k~g~------~~~~~d~~~v~avr~a~---g~~~~l--~vDan~~~~ 197 (366)
T 1tkk_A 137 SVNSPEEMAADAENYLKQGFQTLKI--------KVGK------DDIATDIARIQEIRKRV---GSAVKL--RLDANQGWR 197 (366)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEE--------ECCS------SCHHHHHHHHHHHHHHH---CSSSEE--EEECTTCSC
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEE--------EeCC------CCHHHHHHHHHHHHHHh---CCCCeE--EEECCCCCC
Confidence 4457777888899999999999887 2343 14688899999999764 777766 778876555
Q ss_pred hHHHHH
Q 042063 259 IQTNVD 264 (575)
Q Consensus 259 l~~aId 264 (575)
.+++++
T Consensus 198 ~~~a~~ 203 (366)
T 1tkk_A 198 PKEAVT 203 (366)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666665
No 120
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=43.72 E-value=24 Score=37.41 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=40.3
Q ss_pred CCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCCCCHHHHHhhHHHHHhcC
Q 042063 400 APHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLG 465 (575)
Q Consensus 400 apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G~s~~~i~~F~~~L~~~G 465 (575)
.+.+|+|++|| -||+.+|+.-.+.+++...-.|+.+-+.++=. ++.+.+..|...|...|
T Consensus 150 ~~GvDlll~ET-i~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~-----l~G~~~~~~~~~l~~~~ 209 (406)
T 1lt8_A 150 KKNVDFLIAEY-FEHVEEAVWAVETLIASGKPVAATMAIGPEGD-----LHGVPPGEAAVRLVKAG 209 (406)
T ss_dssp HHTCSEEEECC-CSCHHHHHHHHHHHGGGTSCEEEEECCBTTBC-----TTCCCHHHHHHHHHTTT
T ss_pred hCCCCEEEEcc-cCCHHHHHHHHHHHHHhCCcEEEEEEECCCCC-----cCCCcHHHHHHHhhcCC
Confidence 46799999999 89999999998888765433444444433211 45555666666665555
No 121
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=43.27 E-value=85 Score=31.44 Aligned_cols=83 Identities=16% Similarity=0.235 Sum_probs=47.9
Q ss_pred ceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccH
Q 042063 79 ASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSR 157 (575)
Q Consensus 79 ~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~ 157 (575)
..+.+.+.++-.+....+ |.++|-++|..... ..|..+ . ...+.+.+|.+
T Consensus 119 i~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG-----~~G~~~-----~-~~~~~l~~v~~------------------ 169 (328)
T 2gjl_A 119 VKVIHKCTAVRHALKAERLGVDAVSIDGFECAG-----HPGEDD-----I-PGLVLLPAAAN------------------ 169 (328)
T ss_dssp CEEEEEESSHHHHHHHHHTTCSEEEEECTTCSB-----CCCSSC-----C-CHHHHHHHHHT------------------
T ss_pred CCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCc-----CCCCcc-----c-cHHHHHHHHHH------------------
Confidence 344477888877765554 89999887643211 111111 1 12344555431
Q ss_pred hhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEecc
Q 042063 158 EERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205 (575)
Q Consensus 158 e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIED 205 (575)
.++ +|||+++ |..++.++ ..++++||.||.+==
T Consensus 170 -------~~~--iPviaaG--GI~~~~~v----~~al~~GAdgV~vGs 202 (328)
T 2gjl_A 170 -------RLR--VPIIASG--GFADGRGL----VAALALGADAINMGT 202 (328)
T ss_dssp -------TCC--SCEEEES--SCCSHHHH----HHHHHHTCSEEEESH
T ss_pred -------hcC--CCEEEEC--CCCCHHHH----HHHHHcCCCEEEECH
Confidence 345 9999985 44444444 444557999998753
No 122
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=43.22 E-value=36 Score=36.76 Aligned_cols=29 Identities=3% Similarity=-0.133 Sum_probs=22.4
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeech
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSG 105 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG 105 (575)
+.+++.-++.++-.|+.+.+ |.++|-+++
T Consensus 272 ~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 272 HLEIIGGNVATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp TCCEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred CceEEEcccCcHHHHHHHHHhCCCEEEECC
Confidence 45777777999988887665 899998763
No 123
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=42.74 E-value=63 Score=33.24 Aligned_cols=79 Identities=13% Similarity=0.076 Sum_probs=55.6
Q ss_pred CceeeeCCCCCCCc---hHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceE
Q 042063 170 KPIIADGDTGFGGT---TATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETV 246 (575)
Q Consensus 170 lPIIAD~DtGfGg~---~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~v 246 (575)
+|+- .|++++ ..+.+.++++.+.|..+|-| |+||.++ ++++-+++|+|+|.+. |+|+-
T Consensus 135 v~~y----~~~~~~~~~e~~~~~a~~~~~~Gf~~iKl--------k~g~~g~----~~~~d~~~v~avR~a~---g~~~~ 195 (374)
T 3sjn_A 135 IRCY----GTFIPADKPEDNVAIVQGLKDQGFSSIKF--------GGGVMGD----DPDTDYAIVKAVREAA---GPEME 195 (374)
T ss_dssp EEEE----EEECCCSSGGGGHHHHHHHHTTTCSEEEE--------ECTTTTS----CHHHHHHHHHHHHHHH---CSSSE
T ss_pred eeEE----eccCCCCCHHHHHHHHHHHHHcCCCEEEe--------ccCCCCC----CHHHHHHHHHHHHHHh---CCCCe
Confidence 6654 456655 78889999999999999876 3455433 3688899999999664 77776
Q ss_pred EEEeecccccCc-hHHHHHHHHHhh
Q 042063 247 LVARTDAEAATL-IQTNVDTRDHQF 270 (575)
Q Consensus 247 IiARTDA~~a~~-l~~aId~R~~aY 270 (575)
|. .|+...-. .++++. -.++.
T Consensus 196 l~--vDan~~~~d~~~A~~-~~~~l 217 (374)
T 3sjn_A 196 VQ--IDLASKWHTCGHSAM-MAKRL 217 (374)
T ss_dssp EE--EECTTTTCSHHHHHH-HHHHS
T ss_pred EE--EECCCCCCCHHHHHH-HHHHh
Confidence 54 37776556 777776 44443
No 124
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.26 E-value=42 Score=33.58 Aligned_cols=31 Identities=32% Similarity=0.390 Sum_probs=23.0
Q ss_pred CCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 166 VDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 166 vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
++ +||++ |||= +..+.+++.+++||.||.+-
T Consensus 207 ~~--~Pv~v----GfGI--st~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 207 DA--PPALL----GFGI--SEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp TC--CCEEE----CSSC--CSHHHHHHHHHTTCSEEEES
T ss_pred cC--CCEEE----ECCC--CCHHHHHHHHHcCCCEEEEC
Confidence 45 99999 8882 12466777888999999763
No 125
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=41.16 E-value=28 Score=36.34 Aligned_cols=31 Identities=32% Similarity=0.480 Sum_probs=26.1
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
+||++.. .|||.. .+.++.++++||.+|.+-
T Consensus 207 ~PVivK~-vg~g~s---~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 207 LPFILKE-VGFGMD---VKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp SCEEEEE-CSSCCC---HHHHHHHHHHTCCEEECC
T ss_pred CCEEEEE-CCCCCC---HHHHHHHHHcCCCEEEEe
Confidence 9999994 798854 367889999999999984
No 126
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=40.94 E-value=54 Score=26.03 Aligned_cols=63 Identities=21% Similarity=0.193 Sum_probs=46.8
Q ss_pred EEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccCC--CCHHHHHhhHH-HHHhcCceeeee
Q 042063 405 LIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASG--MTDEEMKDFIP-RIAKLGFCWQFI 471 (575)
Q Consensus 405 l~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G--~s~~~i~~F~~-~L~~~G~~~Q~I 471 (575)
++|+..+.... .+|++.| +..|+..-+|..|..+|.-..- =|-+++..|+. .|.+++-+-..-
T Consensus 5 ~v~v~~~~~~~---~~~~~~l-~~~peV~e~~~vtG~~D~ll~v~~~d~~~l~~~i~~~l~~~~gV~~~~ 70 (83)
T 2cvi_A 5 FILMVTAAGKE---REVMEKL-LAMPEVKEAYVVYGEYDLIVKVETDTLKDLDQFITEKIRKMPEIQMTS 70 (83)
T ss_dssp EEEEEECTTCH---HHHHHHH-HTSTTEEEEEECBSSCSEEEEEEESSHHHHHHHHHTTGGGCTTEEEEE
T ss_pred EEEEEEcCCCH---HHHHHHH-hCCCCeeEEEEEcccCCEEEEEEECCHHHHHHHHHHHhccCCCEeEEE
Confidence 56777765443 5788888 6789999999999999985421 26788999996 788885444433
No 127
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=40.63 E-value=69 Score=32.80 Aligned_cols=74 Identities=18% Similarity=0.093 Sum_probs=52.2
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+.+-. |.+++..+.+.++++.++|..+|-| |+||. ++++-+++|+++|.+. |+|+-|
T Consensus 135 v~~~~~~--~~~~~e~~~~~a~~~~~~Gf~~iKi--------k~g~~------~~~~~~e~v~avr~a~---g~~~~l-- 193 (378)
T 2qdd_A 135 VPINSSI--STGTPDQMLGLIAEAAAQGYRTHSA--------KIGGS------DPAQDIARIEAISAGL---PDGHRV-- 193 (378)
T ss_dssp EEBEEEE--CSCCHHHHHHHHHHHHHHTCCEEEE--------ECCSS------CHHHHHHHHHHHHHSC---CTTCEE--
T ss_pred CceEEEe--cCCCHHHHHHHHHHHHHHhhhheee--------cCCCC------ChHHHHHHHHHHHHHh---CCCCEE--
Confidence 6654332 4467777888899999999999887 33442 4678899999998654 677654
Q ss_pred eecccccCchHHHHH
Q 042063 250 RTDAEAATLIQTNVD 264 (575)
Q Consensus 250 RTDA~~a~~l~~aId 264 (575)
|.|+...-..+++++
T Consensus 194 ~vDan~~~~~~~a~~ 208 (378)
T 2qdd_A 194 TFDVNRAWTPAIAVE 208 (378)
T ss_dssp EEECTTCCCHHHHHH
T ss_pred EEeCCCCCCHHHHHH
Confidence 678765545666666
No 128
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=40.41 E-value=21 Score=36.97 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=23.6
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeech
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVSG 105 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG 105 (575)
+-|++.-|+.++-.|+.+.+ |.++|.++.
T Consensus 211 ~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 211 DVPVIAGGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp SSCEEEECCCSHHHHHHHHTTTCSEEEESC
T ss_pred CCCEEECCcCCHHHHHHHHHcCCCEEEECC
Confidence 56788889999998887665 899999954
No 129
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=40.35 E-value=46 Score=34.70 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=24.1
Q ss_pred CCceeecCC---CCHHHHHHHHc-cCCeEeechH
Q 042063 77 GTASRTFGA---LDPVQVTMMAK-HLDSIYVSGW 106 (575)
Q Consensus 77 ~~~l~~~Ga---~D~~sA~~~a~-gf~AIy~SG~ 106 (575)
+.|+++=++ .++-.|+.+.+ |.++|-++|.
T Consensus 206 ~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~ 239 (365)
T 3sr7_A 206 QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR 239 (365)
T ss_dssp CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCC
Confidence 678888888 78877876665 8999999875
No 130
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=40.06 E-value=43 Score=33.87 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=67.7
Q ss_pred CCCCCccccccCcH-HHHHHHhhhcCCcCcEEeeccCCCCHH-HHHhHHhhhhhcCCCceeeecCCcccccccCC--CCH
Q 042063 376 PRTREGFYRFKGSV-DAAIIRGWAFAPHADLIWMETASPDLA-ECTKFAGGIKSKHPEIMLAYNLSPSFNWDASG--MTD 451 (575)
Q Consensus 376 ~Rt~eG~y~~~gg~-~~ai~R~~a~apyaDl~W~Et~~P~l~-~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~G--~s~ 451 (575)
+|..+|.=...-.. ...+++-.+..| |+|.-=|...... ...+=...+ +.-|+ +-..|+ .|.||...- =+.
T Consensus 55 vRd~~G~ps~d~~~~~e~~~~IR~~~p--d~ii~~TTg~~~~~~~eeR~~~~-~~~Pe-~asl~~-gs~Nf~~~v~~n~~ 129 (282)
T 2y7e_A 55 IREDDGRPSQRLDRFQEAISAIREVVP--EIIIQISTGGAVGESFDKRLAPL-ALKPE-MATLNA-GTLNFGDDIFINHP 129 (282)
T ss_dssp EECTTSCEECCHHHHHHHHHHHHHHCT--TSEEEECSSCSTTCCHHHHHGGG-GGCCS-EEEEEC-CCEEETTEEECCCH
T ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHCC--CeEEEeCCCCCCCCCHHHHHHHh-hcCCC-EEEecc-cccccccccccCCH
Confidence 56666654333222 234454454554 8886655433211 112233444 56887 677887 799997511 167
Q ss_pred HHHHhhHHHHHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhHH
Q 042063 452 EEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGML 496 (575)
Q Consensus 452 ~~i~~F~~~L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM~ 496 (575)
+.++.|...+.+.|.++||+-.--=| -..++.|.++|++
T Consensus 130 ~~~~~~~~~~~e~Gv~pE~e~fd~g~------l~~~~~l~~~Gl~ 168 (282)
T 2y7e_A 130 ADIIRLAEAFKQYNVVPEVEVYESGM------VDAVARLIKKGII 168 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHH------HHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCeEEEEEECHHH------HHHHHHHHHcCCC
Confidence 99999999999999999998754333 3445566677776
No 131
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=39.82 E-value=40 Score=32.84 Aligned_cols=68 Identities=21% Similarity=0.088 Sum_probs=46.1
Q ss_pred CCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecc
Q 042063 176 GDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDA 253 (575)
Q Consensus 176 ~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA 253 (575)
.|.|.||.+-..++.+.+= +..-|++-|+...|- +. -+.++..+++..+-......|.|.++||=.-+
T Consensus 6 fDSG~GGltv~~~l~~~lP--~~~~iy~~D~~~~Py-----g~---~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa 73 (255)
T 2jfz_A 6 FDSGVGGFSVLKSLLKARL--FDEIIYYGDSARVPY-----GT---KDPTTIKQFGLEALDFFKPHEIELLIVACNTA 73 (255)
T ss_dssp EESSSTTHHHHHHHHHTTC--CSEEEEEECTTTCCC-----TT---SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHH
T ss_pred EECCccHHHHHHHHHHHCC--CCCEEEEeCCCCCCC-----CC---CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchh
Confidence 6899999875555544432 678999999974331 22 25788888887765544456899988875433
No 132
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=39.73 E-value=84 Score=33.26 Aligned_cols=28 Identities=7% Similarity=-0.037 Sum_probs=20.9
Q ss_pred CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 77 GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 77 ~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
+-|++.-|+.+.-.+..+.+ |.++|.++
T Consensus 274 ~~pvi~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 274 NRTLIAGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCcEeCCCccCHHHHHHHHHcCCCEEEEC
Confidence 46677778888877765554 89999886
No 133
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=39.68 E-value=59 Score=33.96 Aligned_cols=40 Identities=15% Similarity=0.017 Sum_probs=25.8
Q ss_pred HHHHHHHhhhhC--CCceeecCCCCHHHHHHHHc-cCCeEeec
Q 042063 65 KLWRTLKTHQAN--GTASRTFGALDPVQVTMMAK-HLDSIYVS 104 (575)
Q Consensus 65 kL~~lL~~~~~~--~~~l~~~Ga~D~~sA~~~a~-gf~AIy~S 104 (575)
.+++.++.+.+. +-+++.-++.++-.|+.+.+ |.++|-+|
T Consensus 127 ~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 127 YVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 344455444332 34444436999999887665 89999985
No 134
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=39.30 E-value=52 Score=31.86 Aligned_cols=82 Identities=15% Similarity=0.186 Sum_probs=50.5
Q ss_pred CCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcc-----------cCHHHHHHHHHHHHHh
Q 042063 169 LKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVL-----------VAISEHINRLVAARLQ 237 (575)
Q Consensus 169 ~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~L-----------vp~~E~v~RL~AAR~a 237 (575)
++|.+. +|+-+.....+.++.++++||..|+|-.-...| .+.|..+ +.+++..+-+++.|..
T Consensus 20 ~~~~i~---~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp----~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~ 92 (262)
T 1rd5_A 20 FIPYIT---AGDPDLATTAEALRLLDGCGADVIELGVPCSDP----YIDGPIIQASVARALASGTTMDAVLEMLREVTPE 92 (262)
T ss_dssp EEEEEE---TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCC----TTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG
T ss_pred EEEEee---CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCc----ccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 367776 565556788899999999999999995432211 2334332 2456666666777643
Q ss_pred hhhcCCceEEEEeecccccCchH
Q 042063 238 FDVMGVETVLVARTDAEAATLIQ 260 (575)
Q Consensus 238 ~d~~g~d~vIiARTDA~~a~~l~ 260 (575)
.+.+++++.+.+-.....++
T Consensus 93 ---~~~Pv~~m~~~~~~~~~~~~ 112 (262)
T 1rd5_A 93 ---LSCPVVLLSYYKPIMFRSLA 112 (262)
T ss_dssp ---CSSCEEEECCSHHHHSCCTH
T ss_pred ---CCCCEEEEecCcHHHHHHHH
Confidence 35677777555533333343
No 135
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=38.73 E-value=67 Score=33.45 Aligned_cols=41 Identities=7% Similarity=0.060 Sum_probs=28.1
Q ss_pred HHHHHHhhhhC-CCceeecCC---CCHHHHHHHHc-cCCeEeechH
Q 042063 66 LWRTLKTHQAN-GTASRTFGA---LDPVQVTMMAK-HLDSIYVSGW 106 (575)
Q Consensus 66 L~~lL~~~~~~-~~~l~~~Ga---~D~~sA~~~a~-gf~AIy~SG~ 106 (575)
+++.++...+. +.|+++-++ .++-.|+.+.+ |.++|-++|.
T Consensus 175 ~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~ 220 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQ 220 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCB
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCC
Confidence 44455544332 678888766 67877876665 8999999774
No 136
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=38.46 E-value=63 Score=33.68 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=43.9
Q ss_pred CCceeeeCCCCCC-CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh
Q 042063 169 LKPIIADGDTGFG-GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF 238 (575)
Q Consensus 169 ~lPIIAD~DtGfG-g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~ 238 (575)
...+..+++.++- ++.-+.++++.++++||.-|+|-|.+. +..+.++.+.+++.+...
T Consensus 141 g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G------------~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 141 TDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVG------------YSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSS------------CCCHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccC------------CcCHHHHHHHHHHHHHhC
Confidence 3557888887654 577899999999999999999999983 233456666777776543
No 137
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=38.02 E-value=37 Score=33.50 Aligned_cols=67 Identities=13% Similarity=0.107 Sum_probs=43.6
Q ss_pred eCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhh-cCCceEEEEee
Q 042063 175 DGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDV-MGVETVLVART 251 (575)
Q Consensus 175 D~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~-~g~d~vIiART 251 (575)
=.|+|.||.+-..++.+.+= ...-+++-|+...|- | ..+.++..+++..+...... .|.|.+|||=.
T Consensus 8 vfDSGvGGltv~~~i~~~lP--~~~~iy~~D~~~~Py------G--~~s~~~i~~~~~~~~~~L~~~~g~d~iViACN 75 (272)
T 1zuw_A 8 VIDSGVGGLTVAKEIMRQLP--KENIIYVGDTKRCPY------G--PRPEEEVLQYTWELTNYLLENHHIKMLVIACN 75 (272)
T ss_dssp EEESSSTTHHHHHHHHHHST--TCCEEEEECGGGCCC------S--SSCHHHHHHHHHHHHHHHHHHSCCSEEEECCH
T ss_pred EEeCCcchHHHHHHHHHhCC--CCcEEEeccCCCCCC------C--CCCHHHHHHHHHHHHHHHHhhcCCCEEEEeCc
Confidence 35899999765444444432 556789999963221 1 23577788887766554444 68999988743
No 138
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=37.58 E-value=80 Score=24.55 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=29.6
Q ss_pred HHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHH
Q 042063 266 RDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIED 306 (575)
Q Consensus 266 R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~ 306 (575)
.+..|+. +|.|...|...-+.-..++|.+.+||.+..+
T Consensus 15 ~Av~FL~---dp~V~~sp~~~K~~FL~sKGLt~~EI~~Al~ 52 (54)
T 3ff5_A 15 TAVKFLQ---NSRVRQSPLATRRAFLKKKGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHH---CTTGGGSCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHhC---ChhhhcCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6667884 7888655777777777899999999988754
No 139
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=36.92 E-value=39 Score=36.10 Aligned_cols=32 Identities=28% Similarity=0.378 Sum_probs=22.9
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+|||+|+ |..+.. ..+|.+. +||.+|.+==-.
T Consensus 329 vpVia~G--Gi~~~~---di~kala-lGA~~v~~g~~~ 360 (486)
T 2cu0_A 329 LYVIADG--GIRYSG---DIVKAIA-AGADAVMLGNLL 360 (486)
T ss_dssp CEEEEES--CCCSHH---HHHHHHH-TTCSEEEESTTT
T ss_pred CcEEecC--CCCCHH---HHHHHHH-cCCCceeeChhh
Confidence 8999998 544444 4456554 999999886554
No 140
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=36.63 E-value=1e+02 Score=31.27 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=47.4
Q ss_pred CCCCchHHHHHHHHHHH-cCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccC
Q 042063 179 GFGGTTATVKLCKLFVE-RGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAAT 257 (575)
Q Consensus 179 GfGg~~nv~~lvk~~ie-AGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~ 257 (575)
|.|++....+.++++.+ +|..+|-| |+||. +.++-+++|+++|.+. |+|+-| |.|+...-
T Consensus 139 ~~~~~e~~~~~a~~~~~~~Gf~~iKi--------k~g~~------~~~~~~e~v~avr~a~---g~~~~l--~vDan~~~ 199 (370)
T 1nu5_A 139 ASGDTARDIDSALEMIETRRHNRFKV--------KLGAR------TPAQDLEHIRSIVKAV---GDRASV--RVDVNQGW 199 (370)
T ss_dssp CSSCHHHHHHHHHHHHHTTSCSEEEE--------ECSSS------CHHHHHHHHHHHHHHH---GGGCEE--EEECTTCC
T ss_pred cCCCHHHHHHHHHHHHHhCCccEEEE--------ecCCC------ChHHHHHHHHHHHHhc---CCCCEE--EEECCCCC
Confidence 34567777888899998 99998876 34442 4577889999999764 566654 67777555
Q ss_pred chHHHHH
Q 042063 258 LIQTNVD 264 (575)
Q Consensus 258 ~l~~aId 264 (575)
..+++++
T Consensus 200 ~~~~a~~ 206 (370)
T 1nu5_A 200 DEQTASI 206 (370)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 5666655
No 141
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=35.24 E-value=46 Score=33.39 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=30.5
Q ss_pred CCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEecc
Q 042063 166 VDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205 (575)
Q Consensus 166 vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIED 205 (575)
++ +||++..-.|+-.... .+.++.+.++|+.+|++-.
T Consensus 125 ~~--~pv~vKir~G~~~~~~-~~~a~~l~~~G~d~i~v~g 161 (318)
T 1vhn_A 125 VS--GKFSVKTRLGWEKNEV-EEIYRILVEEGVDEVFIHT 161 (318)
T ss_dssp CS--SEEEEEEESCSSSCCH-HHHHHHHHHTTCCEEEEES
T ss_pred hC--CCEEEEecCCCChHHH-HHHHHHHHHhCCCEEEEcC
Confidence 55 8999999888765443 3999999999999999964
No 142
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=35.19 E-value=85 Score=25.69 Aligned_cols=39 Identities=23% Similarity=0.243 Sum_probs=31.2
Q ss_pred HHHhhhhccCCCCCCcchHHHHHHHHHHCCCCHHHHHHHHHH
Q 042063 266 RDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDN 307 (575)
Q Consensus 266 R~~aYi~Gat~~~~~~~a~ad~i~~~~s~g~s~~ei~~~~~~ 307 (575)
++..|+ .+|.|...|+..-+.-..++|.+.+||++..++
T Consensus 20 ~Av~FL---qdp~V~~sp~~~K~~FL~sKGLt~eEI~~Al~r 58 (70)
T 2w84_A 20 TAVKFL---QNSRVRQSPLATRRAFLKKKGLTDEEIDMAFQQ 58 (70)
T ss_dssp HHHHHH---CSTTGGGSCHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHh---CChhhhhCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 677798 488886557777777778999999999988766
No 143
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=35.11 E-value=1.2e+02 Score=30.86 Aligned_cols=78 Identities=18% Similarity=0.209 Sum_probs=53.1
Q ss_pred CceeeeCCCCCC--CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEE
Q 042063 170 KPIIADGDTGFG--GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVL 247 (575)
Q Consensus 170 lPIIAD~DtGfG--g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vI 247 (575)
+|+-+- .|++ ++..+.+.++++.++|..+|-| |+||. ++++-+++|+++|.+. |+|+-|
T Consensus 134 v~~y~~--~~~~~~~~e~~~~~a~~~~~~Gf~~iKi--------k~g~~------~~~~~~e~v~avr~a~---G~d~~l 194 (371)
T 2ovl_A 134 VPVYAG--GIDLELPVADLKTQADRFLAGGFRAIKM--------KVGRP------DLKEDVDRVSALREHL---GDSFPL 194 (371)
T ss_dssp EEEEEE--CCBTTSCHHHHHHHHHHHHHTTCSCEEE--------ECCCS------SHHHHHHHHHHHHHHH---CTTSCE
T ss_pred eeEEEe--CCCcCCCHHHHHHHHHHHHHcCCCEEEE--------CCCCC------CHHHHHHHHHHHHHHh---CCCCeE
Confidence 565543 3442 5667788889999999888876 34441 5678899999999765 677655
Q ss_pred EEeecccccCchHHHHHHHHHh
Q 042063 248 VARTDAEAATLIQTNVDTRDHQ 269 (575)
Q Consensus 248 iARTDA~~a~~l~~aId~R~~a 269 (575)
|.|+...-..+++++ ..+.
T Consensus 195 --~vDan~~~~~~~a~~-~~~~ 213 (371)
T 2ovl_A 195 --MVDANMKWTVDGAIR-AARA 213 (371)
T ss_dssp --EEECTTCSCHHHHHH-HHHH
T ss_pred --EEECCCCCCHHHHHH-HHHH
Confidence 468776555677666 4444
No 144
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=35.06 E-value=1.3e+02 Score=30.99 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=52.8
Q ss_pred CceeeeCCCC-CCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTG-FGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtG-fGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|+-+-. .| .+++..+.+.++.+.+.|...|-|- .|+ +.++-+++|+++|.+. |+|+-|
T Consensus 139 v~~y~~~-~~~~~~~e~~~~~a~~~~~~G~~~iKiK--------vG~-------~~~~d~~~v~avR~a~---g~d~~l- 198 (389)
T 3ozy_A 139 VRAYASS-IYWDLTPDQAADELAGWVEQGFTAAKLK--------VGR-------APRKDAANLRAMRQRV---GADVEI- 198 (389)
T ss_dssp EEEEEEE-ECSSCCHHHHHHHHHHHHHTTCSEEEEE--------CCS-------CHHHHHHHHHHHHHHH---CTTSEE-
T ss_pred eeeEEec-CCCCCCHHHHHHHHHHHHHCCCCEEeec--------cCC-------CHHHHHHHHHHHHHHc---CCCceE-
Confidence 5554421 04 3467888899999999999998763 222 5788999999999665 778766
Q ss_pred EeecccccCchHHHHH
Q 042063 249 ARTDAEAATLIQTNVD 264 (575)
Q Consensus 249 ARTDA~~a~~l~~aId 264 (575)
|.|+...-..+++++
T Consensus 199 -~vDan~~~~~~~A~~ 213 (389)
T 3ozy_A 199 -LVDANQSLGRHDALA 213 (389)
T ss_dssp -EEECTTCCCHHHHHH
T ss_pred -EEECCCCcCHHHHHH
Confidence 468876656677665
No 145
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=34.75 E-value=44 Score=34.49 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=50.0
Q ss_pred HHHHH-c-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCC
Q 042063 91 VTMMA-K-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDY 168 (575)
Q Consensus 91 A~~~a-~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~ 168 (575)
|++++ + |.+.|-+.+- ++ -|+....+.+++...|+.|.. .++
T Consensus 86 A~~~v~~~GAdiIDIg~e---St-------rP~~~~vs~ee~~~~V~~v~~-------------------------~~~- 129 (323)
T 4djd_D 86 AQKCVAEYGADLIYLKLD---GA-------DPEGANHSVDQCVATVKEVLQ-------------------------AVG- 129 (323)
T ss_dssp HHHHHHTTCCSEEEEECG---GG-------CTTTTCCCHHHHHHHHHHHHH-------------------------HCC-
T ss_pred HHHHHHHcCCCEEEEcCc---cC-------CCCCCCCCHHHHHHHHHHHHh-------------------------hCC-
Confidence 44454 4 8898888762 21 366666777777777666642 256
Q ss_pred CCceeeeCCCCCCCchHHHHHHHHHHHcCceE
Q 042063 169 LKPIIADGDTGFGGTTATVKLCKLFVERGAAG 200 (575)
Q Consensus 169 ~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAG 200 (575)
+||++| |-|+++.=.+.++.-.++|+..
T Consensus 130 -vPlsID---g~~~~T~~~eV~eaAleagag~ 157 (323)
T 4djd_D 130 -VPLVVV---GCGDVEKDHEVLEAVAEAAAGE 157 (323)
T ss_dssp -SCEEEE---CCSCHHHHHHHHHHHHHHTTTS
T ss_pred -ceEEEE---CCCCCCCCHHHHHHHHHhcCCC
Confidence 999999 6688887788899999999753
No 146
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=34.03 E-value=1.4e+02 Score=31.07 Aligned_cols=84 Identities=8% Similarity=0.049 Sum_probs=54.0
Q ss_pred CCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCc-ccCHHHHHHHHHHHHHhhhhcCCceEEEEeeccccc
Q 042063 178 TGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKV-LVAISEHINRLVAARLQFDVMGVETVLVARTDAEAA 256 (575)
Q Consensus 178 tGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~-Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a 256 (575)
.|++.+..+.+.++.+.+.|..++-|- . +..-+++.+... .-++++-+++|+|+|.+. |+|+-|. .|+...
T Consensus 147 ~~~~~~e~~~~~a~~~~~~G~~~~KlK--~-g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~---G~d~~l~--vDan~~ 218 (404)
T 4e5t_A 147 NVYNDADMAAEAAAKAVDQGFTAVKFD--P-AGAYTIYDGHQPSLEDLERSEAFCKQIRAAV---GTKADLL--FGTHGQ 218 (404)
T ss_dssp CTTTCHHHHHHHHHHHHHHTCSEEEEC--C-SCCCBTTCSBCCCHHHHHHHHHHHHHHHHHH---GGGSEEE--ECCCSC
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEeeC--C-CCCCcccccccccHHHHHHHHHHHHHHHHHc---CCCCeEE--EeCCCC
Confidence 455678888999999999999999883 2 111112211111 113678899999999765 6776554 377766
Q ss_pred CchHHHHHHHHHhh
Q 042063 257 TLIQTNVDTRDHQF 270 (575)
Q Consensus 257 ~~l~~aId~R~~aY 270 (575)
-.++++++ -.++.
T Consensus 219 ~~~~~A~~-~~~~l 231 (404)
T 4e5t_A 219 FTVSGAKR-LARRL 231 (404)
T ss_dssp BCHHHHHH-HHHHH
T ss_pred cCHHHHHH-HHHHH
Confidence 56777776 44443
No 147
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=33.50 E-value=83 Score=33.66 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=60.5
Q ss_pred HHHHHhhhhCCC--ceeecCCCCHHHHHHHHc-----cCCeEeechHHHhhccCCCCCCCCCCCCCC--cCcHHHHHHHH
Q 042063 67 WRTLKTHQANGT--ASRTFGALDPVQVTMMAK-----HLDSIYVSGWQCSSTHTSTNEPGPDLADYP--YDTVPNKVEHL 137 (575)
Q Consensus 67 ~~lL~~~~~~~~--~l~~~Ga~D~~sA~~~a~-----gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p--~~tv~~~v~rI 137 (575)
.++|+. ++.+. .+..+|+.++..++.+.+ +.+.|--. +. +..--+.+..+ +..+...|..+
T Consensus 2 ~~ll~~-~~~~~a~av~afn~~n~e~i~Ail~aAee~~sPVIi~~----s~-----~~v~~~gGY~g~~~~~~~~~v~~~ 71 (420)
T 2fiq_A 2 KTLIAR-HKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEA----TS-----NQVNQFGGYTGMTPADFREFVFAI 71 (420)
T ss_dssp HHHHHH-HHTTCCBCEEEECCCCHHHHHHHHHHTTTSCCCEEEEE----ET-----TTBSTTCTTTTBCHHHHHHHHHHH
T ss_pred HHHHHH-HHcCCceEEEEeccCCHHHHHHHHHHHHHcCCCEEEEc----Ch-----hhhhhccCCCCCCHHHHHHHHHHH
Confidence 456665 34455 667888899887654332 45665522 21 11111222223 34555555555
Q ss_pred HHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCc---eeeeCCCCCCCc-----------hHHHHHHHHHHHcCceEEEe
Q 042063 138 FFAQQYHDRKQREARMSMSREERARTPCVDYLKP---IIADGDTGFGGT-----------TATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 138 ~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lP---IIAD~DtGfGg~-----------~nv~~lvk~~ieAGaAGIhI 203 (575)
.+ ..+ +| |+.=.|+| |.. ..+.++++..+++|-.-|+|
T Consensus 72 A~-------------------------~~~--vP~~~VaLHlDHg-~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMi 123 (420)
T 2fiq_A 72 AD-------------------------KVG--FARERIILGGDHL-GPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHL 123 (420)
T ss_dssp HH-------------------------HHT--CCGGGEEEEEEEE-SSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HH-------------------------HcC--cCcceEEEECCCC-CCccccccchhhhhhhHHHHHHHHHHhCCCEEEE
Confidence 32 123 66 99999998 433 34558899999999999999
Q ss_pred ccC
Q 042063 204 EDQ 206 (575)
Q Consensus 204 EDQ 206 (575)
.=.
T Consensus 124 D~S 126 (420)
T 2fiq_A 124 DAS 126 (420)
T ss_dssp CCC
T ss_pred CCC
Confidence 733
No 148
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=33.17 E-value=1.2e+02 Score=29.50 Aligned_cols=107 Identities=15% Similarity=0.029 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhC-CCceee---cCCCCHHH-HHHHHc-cCCeEeechHHHhhccCC-CCCCCCCCCCCCcCcH------
Q 042063 64 KKLWRTLKTHQAN-GTASRT---FGALDPVQ-VTMMAK-HLDSIYVSGWQCSSTHTS-TNEPGPDLADYPYDTV------ 130 (575)
Q Consensus 64 ~kL~~lL~~~~~~-~~~l~~---~Ga~D~~s-A~~~a~-gf~AIy~SG~~vAa~~~~-~~~g~PD~~~~p~~tv------ 130 (575)
+.+.+.+++..+. +.|+.+ |++.|... |..+.+ |.++|-+++......... +.........-.+..-
T Consensus 150 ~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~ 229 (311)
T 1ep3_A 150 EVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA 229 (311)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEe
Q 042063 131 PNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 131 ~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
.+.+++|.+ .++ +|||+.+.=.-+ +.+.+++++||.+|.+
T Consensus 230 ~~~i~~i~~-------------------------~~~--ipvia~GGI~~~------~d~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 230 LKLIHQVAQ-------------------------DVD--IPIIGMGGVANA------QDVLEMYMAGASAVAV 269 (311)
T ss_dssp HHHHHHHHT-------------------------TCS--SCEEECSSCCSH------HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHH-------------------------hcC--CCEEEECCcCCH------HHHHHHHHcCCCEEEE
No 149
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=32.71 E-value=77 Score=31.76 Aligned_cols=57 Identities=11% Similarity=0.108 Sum_probs=42.6
Q ss_pred CceeeeCCCCCC-CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh
Q 042063 170 KPIIADGDTGFG-GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF 238 (575)
Q Consensus 170 lPIIAD~DtGfG-g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~ 238 (575)
+.|..++++++- ++..+.++++.++++|+.-|.|-|... +..+.+..+.+++.+...
T Consensus 135 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G------------~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 135 DVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVG------------YTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp SCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSS------------CCCHHHHHHHHHHHHHHC
T ss_pred CEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC------------CCCHHHHHHHHHHHHHhc
Confidence 557777776544 567789999999999999999999982 234456667777777543
No 150
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=31.59 E-value=37 Score=33.56 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=44.7
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
.|| .=.|+|.||.+-..++.+.+= ...-+++-|+...|- | ..+.++..+++..+-......|.|.+|||
T Consensus 8 ~~I-gvfDSGvGGltv~~~i~~~lP--~~~~iy~~D~~~~Py------G--~~s~~~i~~~~~~~~~~L~~~g~d~IViA 76 (276)
T 2dwu_A 8 SVI-GVLDSGVGGLTVASEIIRQLP--KESICYIGDNERCPY------G--PRSVEEVQSFVFEMVEFLKQFPLKALVVA 76 (276)
T ss_dssp CEE-EEEESSSTTHHHHHHHHHHCT--TSCEEEEECGGGCCC------T--TSCHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred CeE-EEEeCCcchHHHHHHHHHhCC--CCcEEEccCCCCCCC------C--CCCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 353 335999999875555555443 344788999863221 1 23567777777655544444688998887
Q ss_pred ee
Q 042063 250 RT 251 (575)
Q Consensus 250 RT 251 (575)
=.
T Consensus 77 CN 78 (276)
T 2dwu_A 77 CN 78 (276)
T ss_dssp CH
T ss_pred CC
Confidence 53
No 151
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=31.31 E-value=71 Score=30.25 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=24.3
Q ss_pred CCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 166 VDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 166 vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
++ +||++.+ |+-+ .+-++.+.++||.||+|-+..
T Consensus 74 ~~--iPvi~~G--gi~~----~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 74 VF--IPLTVGG--GVRS----LEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp CC--SCEEEES--SCCS----HHHHHHHHHHTCSEEEECHHH
T ss_pred CC--CCEEEEC--CcCC----HHHHHHHHHcCCCEEEEChHH
Confidence 45 9999952 2222 356788888999999997764
No 152
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=30.78 E-value=1.2e+02 Score=31.12 Aligned_cols=68 Identities=22% Similarity=0.186 Sum_probs=48.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
.+..+.+.++++.++|..+|-| |+||. +.++-+++|+++|.+. |+|+-| |.|+...-.+++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKi--------k~g~~------~~~~~~e~v~avR~av---g~d~~l--~vDan~~~~~~~ 222 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKL--------KVGQP------DGALDIARVTAVRKHL---GDAVPL--MVDANQQWDRPT 222 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE--------ECCCS------CHHHHHHHHHHHHHHH---CTTSCE--EEECTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------ecCCC------CHHHHHHHHHHHHHHc---CCCCEE--EEECCCCCCHHH
Confidence 5677888899999999999987 23431 3688899999999764 677655 347776555677
Q ss_pred HHHHHHHh
Q 042063 262 NVDTRDHQ 269 (575)
Q Consensus 262 aId~R~~a 269 (575)
+++ -.+.
T Consensus 223 a~~-~~~~ 229 (393)
T 2og9_A 223 AQR-MCRI 229 (393)
T ss_dssp HHH-HHHH
T ss_pred HHH-HHHH
Confidence 766 4444
No 153
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=30.60 E-value=2e+02 Score=29.15 Aligned_cols=71 Identities=14% Similarity=0.105 Sum_probs=48.3
Q ss_pred CCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchH
Q 042063 181 GGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQ 260 (575)
Q Consensus 181 Gg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~ 260 (575)
+.+..+.+.++++.++|..+|-|- +||..+.-+-++++-+++|+++|.+. |+|+-|. .|+...-..+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik--------~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~--vDan~~~~~~ 214 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLH--------TWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLM--IDAFHWYSRT 214 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEE--------CCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEE--EECCTTCCHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEc--------CCcCccccccchHHHHHHHHHHHHHh---CCCCeEE--EECCCCCCHH
Confidence 456778888999999999888762 34321112225788899999999765 7777554 4776554566
Q ss_pred HHHH
Q 042063 261 TNVD 264 (575)
Q Consensus 261 ~aId 264 (575)
++++
T Consensus 215 ~a~~ 218 (382)
T 1rvk_A 215 DALA 218 (382)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 154
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=29.84 E-value=1.3e+02 Score=28.31 Aligned_cols=28 Identities=14% Similarity=0.223 Sum_probs=20.7
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEe
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
+||++. |+..+. +-++.+.++||.+|+|
T Consensus 76 ipv~v~-----ggI~~~-~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 76 IKVELS-----GGIRDD-DTLAAALATGCTRVNL 103 (244)
T ss_dssp SEEEEE-----SSCCSH-HHHHHHHHTTCSEEEE
T ss_pred CcEEEE-----CCcCCH-HHHHHHHHcCCCEEEE
Confidence 999884 333333 3488899999999986
No 155
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=29.23 E-value=85 Score=28.72 Aligned_cols=23 Identities=17% Similarity=0.300 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCceEEEeccCC
Q 042063 185 ATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 185 nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+..+.++.++++|+..|||.+..
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~ 49 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKN 49 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCS
T ss_pred hHHHHHHHHHHCCCCEEEECCCC
Confidence 67788999999999999999753
No 156
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=29.01 E-value=87 Score=33.42 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=34.5
Q ss_pred CceeeeCCCCCC-CchHHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFG-GTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfG-g~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+.|.++++++|. ++..+.++++.++++|+.-|+|-|.+
T Consensus 165 ~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTv 203 (423)
T 3ivs_A 165 IEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTV 203 (423)
T ss_dssp CEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETT
T ss_pred CEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCcc
Confidence 678899999997 56788999999999999999999998
No 157
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=28.95 E-value=1.1e+02 Score=28.52 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=22.5
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+||++.+ +..+. +.++.+.++||.+|+|-...
T Consensus 78 ipvi~~g-----~i~~~-~~~~~~~~~Gad~V~i~~~~ 109 (253)
T 1h5y_A 78 IPVLVGG-----GVRSL-EDATTLFRAGADKVSVNTAA 109 (253)
T ss_dssp SCEEEES-----SCCSH-HHHHHHHHHTCSEEEESHHH
T ss_pred CCEEEEC-----CCCCH-HHHHHHHHcCCCEEEEChHH
Confidence 9999843 22222 34588888999999987653
No 158
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=28.89 E-value=12 Score=30.77 Aligned_cols=18 Identities=33% Similarity=0.713 Sum_probs=15.6
Q ss_pred ccccCCCCCCCCcccccc
Q 042063 369 LFWDWDLPRTREGFYRFK 386 (575)
Q Consensus 369 ~~~dwd~~Rt~eG~y~~~ 386 (575)
+-=||+..||.+|-||+-
T Consensus 8 ~p~dW~VsRt~dGdYrL~ 25 (76)
T 2rp4_A 8 SAAEWNVSRTPDGDYRLA 25 (76)
T ss_dssp SSCCCEEECCTTTBEEEE
T ss_pred CCccceeeeccCCceEEE
Confidence 456899999999999964
No 159
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=28.30 E-value=1.4e+02 Score=30.09 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=0.0
Q ss_pred HHHHHc-cCCeE---eechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCC
Q 042063 91 VTMMAK-HLDSI---YVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCV 166 (575)
Q Consensus 91 A~~~a~-gf~AI---y~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~v 166 (575)
|+.+.+ ||++| ..-|+.+...++....-.-|.--=++..-+..+.+|.++ .|. .+
T Consensus 150 A~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~a------------------vr~---~v 208 (338)
T 1z41_A 150 AARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDE------------------VKQ---VW 208 (338)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHH------------------HHH---HC
T ss_pred HHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHH------------------HHH---Hc
Q ss_pred CCCCceeeeCCC------CCCCchHHHHHHHHHHHcCceEEEe
Q 042063 167 DYLKPIIADGDT------GFGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 167 d~~lPIIAD~Dt------GfGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
+ .||.+..-. |+ ...+..++++.+.++|+..||+
T Consensus 209 ~--~pv~vris~~~~~~~g~-~~~~~~~~a~~l~~~Gvd~i~v 248 (338)
T 1z41_A 209 D--GPLFVRVSASDYTDKGL-DIADHIGFAKWMKEQGVDLIDC 248 (338)
T ss_dssp C--SCEEEEEECCCCSTTSC-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred C--CcEEEEecCcccCCCCC-CHHHHHHHHHHHHHcCCCEEEE
No 160
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=28.05 E-value=1.5e+02 Score=30.98 Aligned_cols=67 Identities=24% Similarity=0.321 Sum_probs=49.8
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
.+..+.+.++++.++|-.+|-| |+| + ++++-+++|+++|.+. |+|+-| |.|+...-.+++
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKi--------k~g---~----~~~~d~e~v~avR~a~---G~d~~l--~vDan~~~~~~~ 257 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKL--------KVG---A----NVQDDIRRCRLARAAI---GPDIAM--AVDANQRWDVGP 257 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--------ECC---S----CHHHHHHHHHHHHHHH---CSSSEE--EEECTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------ccC---C----CHHHHHHHHHHHHHhc---CCCCeE--EEECCCCCCHHH
Confidence 5667888899999999999886 222 2 4688899999999664 788766 568876656777
Q ss_pred HHHHHHHh
Q 042063 262 NVDTRDHQ 269 (575)
Q Consensus 262 aId~R~~a 269 (575)
+++ ..+.
T Consensus 258 a~~-~~~~ 264 (441)
T 2hxt_A 258 AID-WMRQ 264 (441)
T ss_dssp HHH-HHHT
T ss_pred HHH-HHHH
Confidence 777 5555
No 161
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=27.95 E-value=1.5e+02 Score=30.30 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=51.3
Q ss_pred CceeeeCCCCC--CCc---hHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCc
Q 042063 170 KPIIADGDTGF--GGT---TATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVE 244 (575)
Q Consensus 170 lPIIAD~DtGf--Gg~---~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d 244 (575)
+|+.+= +|. +++ ..+.+.++++.++|..+|-| |+|| -++++-+++|+++|.+. |+|
T Consensus 124 vp~~~~--~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKi--------k~g~------~~~~~d~e~v~avR~a~---G~d 184 (382)
T 2gdq_A 124 IPVYAS--FQSYSDSPQWISRSVSNVEAQLKKGFEQIKV--------KIGG------TSFKEDVRHINALQHTA---GSS 184 (382)
T ss_dssp EEEEEE--CCCBCSSTTHHHHHHHHHHHHHTTTCCEEEE--------ECSS------SCHHHHHHHHHHHHHHH---CTT
T ss_pred eeEEEE--ecccCCCcccHHHHHHHHHHHHHcCCCEEEE--------cCCC------CCHHHHHHHHHHHHHhh---CCC
Confidence 666542 232 567 77788899999999998887 3444 14688899999999765 777
Q ss_pred eEEEEeecccccCchHHHHH
Q 042063 245 TVLVARTDAEAATLIQTNVD 264 (575)
Q Consensus 245 ~vIiARTDA~~a~~l~~aId 264 (575)
+-|. .|+...-.++++++
T Consensus 185 ~~l~--vDan~~~~~~~a~~ 202 (382)
T 2gdq_A 185 ITMI--LDANQSYDAAAAFK 202 (382)
T ss_dssp SEEE--EECTTCCCHHHHHT
T ss_pred CEEE--EECCCCCCHHHHHH
Confidence 7555 37765545666655
No 162
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=27.75 E-value=97 Score=29.32 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=22.7
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+||++.+ +..+ .+-++.+.++||.+|+|-...
T Consensus 75 ipvi~~g-----gI~~-~~~~~~~~~~Gad~V~lg~~~ 106 (253)
T 1thf_D 75 IPFTVGG-----GIHD-FETASELILRGADKVSINTAA 106 (253)
T ss_dssp SCEEEES-----SCCS-HHHHHHHHHTTCSEEEESHHH
T ss_pred CCEEEeC-----CCCC-HHHHHHHHHcCCCEEEEChHH
Confidence 9999842 3222 244888889999999986654
No 163
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=27.70 E-value=39 Score=35.63 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=32.4
Q ss_pred CceeeeCCCCCCCchH-----HHHHHHHHHHcCce---EEEeccC
Q 042063 170 KPIIADGDTGFGGTTA-----TVKLCKLFVERGAA---GVHIEDQ 206 (575)
Q Consensus 170 lPIIAD~DtGfGg~~n-----v~~lvk~~ieAGaA---GIhIEDQ 206 (575)
+|||+|+=.|=|+-.. |..+++.-+.+|+. |+-||=-
T Consensus 274 ~pVivD~SHans~k~~~~Q~~V~~~~~a~ia~G~d~i~GlmiEsh 318 (370)
T 1of8_A 274 NGLMIDYSHGNSNKDFRNQPKVNDVVCEQIANGENAITGVMIESN 318 (370)
T ss_dssp CCEEEESSGGGGTSCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBC
T ss_pred CCEEEeCcccchhhhhhhhhHHHHHHHHHHHcCCCcceEEEEEec
Confidence 8999999998776555 99999999999999 9999954
No 164
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=27.59 E-value=1.3e+02 Score=29.95 Aligned_cols=63 Identities=16% Similarity=0.124 Sum_probs=40.7
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+ -+|--+...+.++++...++||.|+-+==-- . .+ .+-++.++-.++.-.+. +.+++|=
T Consensus 77 vpvia--Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~-y--------~~--~~~~~l~~~f~~va~a~---~lPiilY 139 (297)
T 3flu_A 77 VPVIA--GTGANNTVEAIALSQAAEKAGADYTLSVVPY-Y--------NK--PSQEGIYQHFKTIAEAT---SIPMIIY 139 (297)
T ss_dssp SCEEE--ECCCSSHHHHHHHHHHHHHTTCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred CcEEE--eCCCcCHHHHHHHHHHHHHcCCCEEEECCCC-C--------CC--CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 89999 2343357789999999999999999874211 0 11 13456666666654433 5666654
No 165
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=27.56 E-value=82 Score=31.23 Aligned_cols=70 Identities=17% Similarity=0.144 Sum_probs=44.8
Q ss_pred eeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh-hhcCCceEEEEee
Q 042063 173 IADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF-DVMGVETVLVART 251 (575)
Q Consensus 173 IAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~-d~~g~d~vIiART 251 (575)
|.=.|+|.||..-..++.+.+ -...-|++-|+...|- | ..+.++..+|..++.... +..|.|++|||=.
T Consensus 24 IgvfDSGvGGltv~~~i~~~l--P~~~~iy~~D~~~~Py------G--~~s~~~i~~~~~~i~~~ll~~~g~d~IviaCN 93 (285)
T 2jfn_A 24 VLVFDSGVGGLSVYDEIRHLL--PDLHYIYAFDNVAFPY------G--EKSEAFIVERVVAIVTAVQERYPLALAVVACN 93 (285)
T ss_dssp EEEEESSSTHHHHHHHHHHHS--TTSEEEEEECTTTCCT------T--TSCHHHHHHHHHHHHHHHHHHSCCSEEEECCH
T ss_pred EEEEeCCccHHHHHHHHHHhC--CCCCeEEeeccCCCCC------c--cCCHHHHHHHHHHHHHHHHHhCCCCEEEEECc
Confidence 444569999876555555544 3566788899974331 1 246677777777665432 3368999888754
Q ss_pred c
Q 042063 252 D 252 (575)
Q Consensus 252 D 252 (575)
-
T Consensus 94 T 94 (285)
T 2jfn_A 94 T 94 (285)
T ss_dssp H
T ss_pred c
Confidence 3
No 166
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=27.19 E-value=1.2e+02 Score=23.58 Aligned_cols=61 Identities=13% Similarity=0.170 Sum_probs=44.9
Q ss_pred EEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCcccccccC--CCCHHHHHhhHH-HHHhcCceee
Q 042063 405 LIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDAS--GMTDEEMKDFIP-RIAKLGFCWQ 469 (575)
Q Consensus 405 l~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~~--G~s~~~i~~F~~-~L~~~G~~~Q 469 (575)
++|+..+... ..+|++.+ +..|+..-+|..+..+|.-.. -=|.+++..|+. .|.+..-+-.
T Consensus 5 ~v~v~~~~~~---~~~~~~~l-~~~peV~~~~~vtG~~d~l~~v~~~d~~~l~~~~~~~l~~~~gV~~ 68 (83)
T 2zbc_A 5 IVLINTDAGG---EDEVFERL-KSMSEVTEVHVVYGVYDIVVKVEADSMDKLKDFVTNTIRKLPKVRS 68 (83)
T ss_dssp EEEEEESTTC---HHHHHHHH-TTCTTEEEEEECSSSCSEEEEEECSSHHHHHHHHHHTGGGSTTEEE
T ss_pred EEEEEEcCCC---HHHHHHHH-hCCCCeEEEEEEeccCCEEEEEEECCHHHHHHHHHHHhcCCCCEeE
Confidence 5677775443 36788888 679999999999999998542 125688999996 7887733433
No 167
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=27.09 E-value=1.3e+02 Score=28.14 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=20.7
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEe
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
+||++. |+..+. +-++.+.++||.+|++
T Consensus 75 ipv~v~-----ggi~~~-~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 75 VQVELS-----GGIRDD-ESLAAALATGCARVNV 102 (244)
T ss_dssp SEEEEE-----SSCCSH-HHHHHHHHTTCSEEEE
T ss_pred CcEEEE-----CCCCCH-HHHHHHHHcCCCEEEE
Confidence 999884 333333 3488899999999987
No 168
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=26.99 E-value=1.3e+02 Score=28.74 Aligned_cols=32 Identities=25% Similarity=0.143 Sum_probs=22.3
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+||++. .|+.++.. ++.+.++||.||+|-+..
T Consensus 75 iPvi~~--ggi~~~~~----i~~~~~~Gad~v~lg~~~ 106 (266)
T 2w6r_A 75 LPIIAS--GGAGKMEH----FLEAFLAGADKALAASVF 106 (266)
T ss_dssp SCEEEE--SCCCSTHH----HHHHHHHTCSEEECCCCC
T ss_pred CCEEEE--CCCCCHHH----HHHHHHcCCcHhhhhHHH
Confidence 999995 33333333 455567899999997765
No 169
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=26.95 E-value=1.8e+02 Score=29.87 Aligned_cols=78 Identities=14% Similarity=0.153 Sum_probs=54.1
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+-+ -.|.+++..+.+.++.+.+.|...|-|- +|. +.++-+++|+|+|.+. |+|+-|
T Consensus 135 v~~~~--~~~~~~~e~~~~~a~~~~~~G~~~iKiK--------~G~-------~~~~d~~~v~avR~a~---g~~~~l-- 192 (378)
T 3eez_A 135 RPIAS--SVGAKSVEETRAVIDRYRQRGYVAHSVK--------IGG-------DVERDIARIRDVEDIR---EPGEIV-- 192 (378)
T ss_dssp EEBBC--CBCSCCHHHHHHHHHHHHHTTCCEEEEE--------CCS-------CHHHHHHHHHHHTTSC---CTTCEE--
T ss_pred EEEEE--EecCCCHHHHHHHHHHHHhCCCCEEEec--------cCC-------CHHHHHHHHHHHHHHc---CCCceE--
Confidence 55543 3345678888889999999999988762 221 5678899999998654 777766
Q ss_pred eecccccCchHHHHHHHHHhh
Q 042063 250 RTDAEAATLIQTNVDTRDHQF 270 (575)
Q Consensus 250 RTDA~~a~~l~~aId~R~~aY 270 (575)
|.|+...-..+++++ ..++.
T Consensus 193 ~vDan~~~~~~~a~~-~~~~l 212 (378)
T 3eez_A 193 LYDVNRGWTRQQALR-VMRAT 212 (378)
T ss_dssp EEECTTCCCHHHHHH-HHHHT
T ss_pred EEECCCCCCHHHHHH-HHHHh
Confidence 458876666777665 44443
No 170
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=26.78 E-value=99 Score=30.75 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=35.6
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF 238 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~ 238 (575)
++..+.++++.++++||..|+|-|... +..+.+..+.+++.+...
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G------------~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLGDTIG------------VGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS------------CCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCC------------CcCHHHHHHHHHHHHHhC
Confidence 677899999999999999999999972 234567777777777543
No 171
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=26.72 E-value=26 Score=35.77 Aligned_cols=165 Identities=15% Similarity=0.081 Sum_probs=87.0
Q ss_pred CCCCCCCCCCHHHHHHhhCCccc--------cCCchHHHHHHHHH----------------HHhhhh-CCCceeecCCCC
Q 042063 33 RFRLTRRPYSARDVVALRGSLRQ--------SYGSNEMAKKLWRT----------------LKTHQA-NGTASRTFGALD 87 (575)
Q Consensus 33 R~~~i~R~Yta~~v~~~rgs~~~--------~y~~~~~A~kL~~l----------------L~~~~~-~~~~l~~~Ga~D 87 (575)
.+.|+.|-=++++|..-|..+.+ -| -.-|+-|..+ .+...+ .-+..+..||.|
T Consensus 47 ~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ--~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~ 124 (291)
T 3o07_A 47 KSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGH--FVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKD 124 (291)
T ss_dssp TTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTC--HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESS
T ss_pred hcCCccccCCHHHHHHHHHhCCCCeEEEEecCc--HHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCC
Confidence 45578899999999987776532 22 1234444431 000111 123466789999
Q ss_pred HHHHHHH-HccCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHH-------hhh-hHHHH-HHH-Hh---
Q 042063 88 PVQVTMM-AKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFA-------QQY-HDRKQ-REA-RM--- 153 (575)
Q Consensus 88 ~~sA~~~-a~gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~a-------q~~-hDr~q-~~~-r~--- 153 (575)
-..|... ..|++-|-+.|.+ .+ + .|.+.|+++-.. +.+ -++.- ... ..
T Consensus 125 l~EAlrri~eGA~mIrTtge~--gt-----------g-----~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad 186 (291)
T 3o07_A 125 LGEALRRINEGAAMIRTKGEA--GT-----------G-----DVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVP 186 (291)
T ss_dssp HHHHHHHHHHTCSEEEECCCT--TS-----------C-----CTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCCCEEEecCcC--CC-----------c-----cHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCC
Confidence 9998654 4599999998742 10 1 133344333211 011 00000 000 00
Q ss_pred -hccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHH
Q 042063 154 -SMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLV 232 (575)
Q Consensus 154 -~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~ 232 (575)
.+-.+-+ ...+ +|||+.++.|...+.++.+ +.+.|+.||-+-=-... .+ .+..+.++++
T Consensus 187 ~elI~~Ik---e~~~--IPVV~IAnGGI~TpedA~~----~le~GaDGVmVGrAI~~-------s~----DP~~~Akafv 246 (291)
T 3o07_A 187 VSLLKDVL---EKGK--LPVVNFAAGGVATPADAAL----LMQLGCDGVFVGSGIFK-------SS----NPVRLATAVV 246 (291)
T ss_dssp HHHHHHHH---HHTS--CSSCEEBCSSCCSHHHHHH----HHHTTCSCEEECGGGGG-------SS----CHHHHHHHHH
T ss_pred HHHHHHHH---HccC--CCEEEecCCCCCCHHHHHH----HHHhCCCEEEEchHHhC-------CC----CHHHHHHHHH
Confidence 0000000 1234 9999999988877765544 34889999987543310 01 2567777776
Q ss_pred HHHHh
Q 042063 233 AARLQ 237 (575)
Q Consensus 233 AAR~a 237 (575)
.+...
T Consensus 247 ~Av~~ 251 (291)
T 3o07_A 247 EATTH 251 (291)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66543
No 172
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.68 E-value=30 Score=34.51 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=27.9
Q ss_pred CceeeeCCCCCCCch---HHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGTT---ATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~~---nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+||+. +||-|+. .+.+.++.+.++||.|+.+=|-.
T Consensus 96 ~Pivl---m~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp 133 (267)
T 3vnd_A 96 MPIGL---LLYANLVFANGIDEFYTKAQAAGVDSVLIADVP 133 (267)
T ss_dssp CCEEE---EECHHHHHHHCHHHHHHHHHHHTCCEEEETTSC
T ss_pred CCEEE---EecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCC
Confidence 89987 3776652 34678999999999999998864
No 173
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=26.65 E-value=1.7e+02 Score=26.56 Aligned_cols=84 Identities=12% Similarity=0.107 Sum_probs=45.8
Q ss_pred CceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q 042063 78 TASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMS 156 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~ 156 (575)
+.+....++++..+....+ |++.|-+++..-+ .+.|+ ..+. -++.++++.+
T Consensus 108 ~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~-------~~~~~--~~~~--~~~~l~~l~~----------------- 159 (215)
T 1xi3_A 108 NLIIGASVYSLEEALEAEKKGADYLGAGSVFPT-------KTKED--ARVI--GLEGLRKIVE----------------- 159 (215)
T ss_dssp TSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC-----------C--CCCC--HHHHHHHHHH-----------------
T ss_pred CCEEEEecCCHHHHHHHHhcCCCEEEEcCCccC-------CCCCC--CCCc--CHHHHHHHHH-----------------
Confidence 3455555788877654433 7888887652101 11122 1122 2445555532
Q ss_pred HhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccC
Q 042063 157 REERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQ 206 (575)
Q Consensus 157 ~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ 206 (575)
..+ +||++++ |-. +.| ++.+.++|+.||.+---
T Consensus 160 --------~~~--~pvia~G--GI~-~~n----v~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 160 --------SVK--IPVVAIG--GIN-KDN----AREVLKTGVDGIAVISA 192 (215)
T ss_dssp --------HCS--SCEEEES--SCC-TTT----HHHHHTTTCSEEEESHH
T ss_pred --------hCC--CCEEEEC--CcC-HHH----HHHHHHcCCCEEEEhHH
Confidence 134 8999974 322 444 45566799999987543
No 174
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=26.10 E-value=86 Score=31.24 Aligned_cols=63 Identities=19% Similarity=0.184 Sum_probs=41.9
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+= +|-.+...+.++++...++||.|+-+==-- . .+ .+-++.++-.++.-.+. +.+++|=
T Consensus 72 vpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y--------~~--~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 72 VPVIAG--TGTNDTEKSIQASIQAKALGADAIMLITPY-Y--------NK--TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp SCEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred CcEEEe--CCcccHHHHHHHHHHHHHcCCCEEEECCCC-C--------CC--CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 899993 454467789999999999999999884211 1 11 14456666666654443 5676654
No 175
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=26.06 E-value=2.6e+02 Score=25.57 Aligned_cols=93 Identities=11% Similarity=0.044 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhCCCcee--ecCCCCHHHHHHHHc--cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHH
Q 042063 64 KKLWRTLKTHQANGTASR--TFGALDPVQVTMMAK--HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFF 139 (575)
Q Consensus 64 ~kL~~lL~~~~~~~~~l~--~~Ga~D~~sA~~~a~--gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~ 139 (575)
+.+.+.++...+.+..+. +.+++++......+. |.+.|++.-.--... ...+.++.+++|.+
T Consensus 90 ~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~--------------~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 90 LTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQA--------------AGRKPIDDLITMLK 155 (211)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHH--------------TTCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccc--------------cCCCCHHHHHHHHH
Q ss_pred HhhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEe
Q 042063 140 AQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHI 203 (575)
Q Consensus 140 aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhI 203 (575)
. ..+ +||+++ ||.. .+.++.+.++||.||.+
T Consensus 156 ~------------------------~~~--~~i~~~-----gGI~--~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 156 V------------------------RRK--ARIAVA-----GGIS--SQTVKDYALLGPDVVIV 186 (211)
T ss_dssp H------------------------CSS--CEEEEE-----SSCC--TTTHHHHHTTCCSEEEE
T ss_pred H------------------------cCC--CcEEEE-----CCCC--HHHHHHHHHcCCCEEEE
No 176
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=26.01 E-value=1.4e+02 Score=29.96 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=28.7
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccC
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQ 206 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ 206 (575)
+||++=.-.++ ...++.++++.++++||.||++-.-
T Consensus 212 ~Pv~vKi~~~~-~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 212 VPIAVKIAPDL-SEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCEEEECCSCC-CHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CceEEEecCCC-CHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 89999865443 3346788999999999999998754
No 177
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=25.97 E-value=2e+02 Score=29.66 Aligned_cols=68 Identities=26% Similarity=0.301 Sum_probs=48.7
Q ss_pred CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchHH
Q 042063 182 GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQT 261 (575)
Q Consensus 182 g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~~ 261 (575)
.+..+.+.++++.++|..+|-| |+|+ -+.++-+++|+++|.+. |+|+-| |.|+...-.+++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKi--------k~g~------~~~~~d~e~v~avR~av---G~d~~l--~vDan~~~~~~~ 235 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKL--------KVGQ------PNCAEDIRRLTAVREAL---GDEFPL--MVDANQQWDRET 235 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--------ECCC------SCHHHHHHHHHHHHHHH---CSSSCE--EEECTTCSCHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEE--------ecCC------CCHHHHHHHHHHHHHHc---CCCCeE--EEECCCCCCHHH
Confidence 5677888899999999999887 2333 14678889999998664 777655 458876555677
Q ss_pred HHHHHHHh
Q 042063 262 NVDTRDHQ 269 (575)
Q Consensus 262 aId~R~~a 269 (575)
+++ ..+.
T Consensus 236 ai~-~~~~ 242 (398)
T 2pp0_A 236 AIR-MGRK 242 (398)
T ss_dssp HHH-HHHH
T ss_pred HHH-HHHH
Confidence 766 4444
No 178
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=25.84 E-value=1.4e+02 Score=29.99 Aligned_cols=63 Identities=19% Similarity=0.191 Sum_probs=42.5
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+= +|-.+...+.++++...++||.|+-+==-- . .++ +-++.++-.++.-.+. +.+++|=
T Consensus 85 vpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y--------~~~--s~~~l~~~f~~va~a~---~lPiilY 147 (304)
T 3l21_A 85 ARVIAG--AGTYDTAHSIRLAKACAAEGAHGLLVVTPY-Y--------SKP--PQRGLQAHFTAVADAT---ELPMLLY 147 (304)
T ss_dssp SEEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEEECCC-S--------SCC--CHHHHHHHHHHHHTSC---SSCEEEE
T ss_pred CeEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEECCCC-C--------CCC--CHHHHHHHHHHHHHhc---CCCEEEE
Confidence 899994 454467889999999999999999884211 1 111 4566776666665433 4566554
No 179
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=25.82 E-value=2.9e+02 Score=28.43 Aligned_cols=79 Identities=13% Similarity=0.129 Sum_probs=56.4
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHc-CceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVER-GAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieA-GaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|+-+- .|++++..+.+.++.+.+. |...+-|- .|. -+.++-+++|+|+|.+. |+|+-|
T Consensus 157 v~~y~s--~g~~~~e~~~~~a~~~~~~~G~~~~KlK--------vG~------~~~~~d~~~v~avR~a~---G~~~~l- 216 (383)
T 3toy_A 157 IPAYDS--YGVLDARDDERTLRTACDEHGFRAIKSK--------GGH------GDLATDEAMIKGLRALL---GPDIAL- 216 (383)
T ss_dssp EEEEEE--CSSCCHHHHHHHHHHHHHTSCCCEEEEE--------CCS------SCHHHHHHHHHHHHHHH---CTTSEE-
T ss_pred eEEeEe--cCCCCHHHHHHHHHHHHHccCCcEEEEe--------cCC------CCHHHHHHHHHHHHHHh---CCCCeE-
Confidence 566543 5777888888999999999 99888762 221 14678899999999664 778766
Q ss_pred EeecccccCchHHHHHHHHHhh
Q 042063 249 ARTDAEAATLIQTNVDTRDHQF 270 (575)
Q Consensus 249 ARTDA~~a~~l~~aId~R~~aY 270 (575)
|.|+..+-..+++++ ..++.
T Consensus 217 -~vDaN~~~~~~~A~~-~~~~l 236 (383)
T 3toy_A 217 -MLDFNQSLDPAEATR-RIARL 236 (383)
T ss_dssp -EEECTTCSCHHHHHH-HHHHH
T ss_pred -EEeCCCCCCHHHHHH-HHHHH
Confidence 568887666777766 44443
No 180
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=25.66 E-value=1.3e+02 Score=30.29 Aligned_cols=81 Identities=17% Similarity=0.148 Sum_probs=46.7
Q ss_pred ceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccH
Q 042063 79 ASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSR 157 (575)
Q Consensus 79 ~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~ 157 (575)
..+.+.+.++-.|..+.+ |.++|.++|... .|... . . .....+.+|.+
T Consensus 111 ~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~--------GG~~g-~---~-~~~~ll~~i~~------------------ 159 (332)
T 2z6i_A 111 IIVIPVVPSVALAKRMEKIGADAVIAEGMEA--------GGHIG-K---L-TTMTLVRQVAT------------------ 159 (332)
T ss_dssp CEEEEEESSHHHHHHHHHTTCSCEEEECTTS--------SEECC-S---S-CHHHHHHHHHH------------------
T ss_pred CeEEEEeCCHHHHHHHHHcCCCEEEEECCCC--------CCCCC-C---c-cHHHHHHHHHH------------------
Confidence 344456666666665554 899999987521 11111 1 1 12345555532
Q ss_pred hhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEecc
Q 042063 158 EERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205 (575)
Q Consensus 158 e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIED 205 (575)
.++ +|||+++ |.+++.+ +..+++.||.||.+==
T Consensus 160 -------~~~--iPViaaG--GI~~~~~----~~~al~~GAdgV~vGs 192 (332)
T 2z6i_A 160 -------AIS--IPVIAAG--GIADGEG----AAAGFMLGAEAVQVGT 192 (332)
T ss_dssp -------HCS--SCEEEES--SCCSHHH----HHHHHHTTCSEEEECH
T ss_pred -------hcC--CCEEEEC--CCCCHHH----HHHHHHcCCCEEEecH
Confidence 245 9999985 4444544 4455568999998743
No 181
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=25.61 E-value=81 Score=32.13 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=42.4
Q ss_pred CceeeeCCCCCC-CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhh
Q 042063 170 KPIIADGDTGFG-GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQF 238 (575)
Q Consensus 170 lPIIAD~DtGfG-g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~ 238 (575)
+.|..+++.++- ++.-+.++++.++++|+.-|.|-|... +..+.+..+.+++.+...
T Consensus 136 ~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G------------~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 136 HEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTG------------YMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp SEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSS------------CCCHHHHHHHHHHHHHHC
T ss_pred CEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccC------------CcCHHHHHHHHHHHHHhC
Confidence 557777776643 577789999999999999999999982 233456666777776543
No 182
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=25.07 E-value=70 Score=32.49 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=32.5
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHH
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARL 236 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~ 236 (575)
+||++=++.|..++. .++.+.++||.||.+==-.. | .. .+.+.+.+|+.+..
T Consensus 208 iPVivvA~GGI~t~~----dv~~~~~~GAdgVlVGsai~--~-----a~----dp~~~~~~l~~ai~ 259 (297)
T 4adt_A 208 LPVVNFAAGGIATPA----DAAMCMQLGMDGVFVGSGIF--E-----SE----NPQKMASSIVMAVS 259 (297)
T ss_dssp CSSEEEEESCCCSHH----HHHHHHHTTCSCEEESHHHH--T-----SS----CHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCCHH----HHHHHHHcCCCEEEEhHHHH--c-----CC----CHHHHHHHHHHHHH
Confidence 899865667776664 45667789999998753321 0 00 34566666665543
No 183
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=24.88 E-value=2.7e+02 Score=29.04 Aligned_cols=82 Identities=9% Similarity=0.061 Sum_probs=52.1
Q ss_pred CCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCC-cccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCc
Q 042063 180 FGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGK-VLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATL 258 (575)
Q Consensus 180 fGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk-~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~ 258 (575)
.+.+..+.+.++.+.+.|..+|-|- . +....++.+.. ..-.+++-+++|+|+|.+. |+|+-|. .|+...-.
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK--~-g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~---G~d~~l~--vDaN~~~~ 213 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFD--P-AGPYTAYSGHQLSLEVLDRCELFCRRVREAV---GSKADLL--FGTHGQMV 213 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEC--C-SCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH---TTSSEEE--ECCCSCBC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEC--C-CCCCccccccccchhhHHHHHHHHHHHHHHh---CCCCeEE--EECCCCCC
Confidence 3467888888999999999999882 2 11111211111 1112678899999999664 7887654 37776656
Q ss_pred hHHHHHHHHHhh
Q 042063 259 IQTNVDTRDHQF 270 (575)
Q Consensus 259 l~~aId~R~~aY 270 (575)
.++++. -.++.
T Consensus 214 ~~~A~~-~~~~L 224 (412)
T 4e4u_A 214 PSSAIR-LAKRL 224 (412)
T ss_dssp HHHHHH-HHHHH
T ss_pred HHHHHH-HHHHh
Confidence 777765 44433
No 184
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=24.51 E-value=2.3e+02 Score=29.10 Aligned_cols=74 Identities=18% Similarity=0.104 Sum_probs=50.6
Q ss_pred CceeeeCCCCCC--CchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEE
Q 042063 170 KPIIADGDTGFG--GTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVL 247 (575)
Q Consensus 170 lPIIAD~DtGfG--g~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vI 247 (575)
+|+.+- .|++ .+..+.+.++++.++|..+|-| |+|| -++++-+++|+++|.+. |+|+-|
T Consensus 133 vp~y~~--~~~~~~~~~~~~~~a~~~~~~Gf~~vKi--------k~g~------~~~~~~~e~v~avR~a~---G~~~~l 193 (389)
T 2oz8_A 133 VKAYAS--GLDFHLDDDAFVSLFSHAASIGYSAFKI--------KVGH------RDFDRDLRRLELLKTCV---PAGSKV 193 (389)
T ss_dssp EEEEEE--CCBTTCCHHHHHHHHHHHHHTTCCEEEE--------ECCC------SSHHHHHHHHHHHHTTS---CTTCEE
T ss_pred eEEEEe--CCCcCCCHHHHHHHHHHHHHhCCCEEEE--------ccCC------CCHHHHHHHHHHHHHhh---CCCCeE
Confidence 566543 3443 5677888899999999988876 3444 24577889999998654 777765
Q ss_pred EEeecccccCchHHHHH
Q 042063 248 VARTDAEAATLIQTNVD 264 (575)
Q Consensus 248 iARTDA~~a~~l~~aId 264 (575)
. .|+...-.++++++
T Consensus 194 ~--vDan~~~~~~~a~~ 208 (389)
T 2oz8_A 194 M--IDPNEAWTSKEALT 208 (389)
T ss_dssp E--EECTTCBCHHHHHH
T ss_pred E--EECCCCCCHHHHHH
Confidence 5 47765545666665
No 185
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=24.22 E-value=1.5e+02 Score=29.94 Aligned_cols=63 Identities=16% Similarity=0.233 Sum_probs=40.4
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+ -+|--+...+.+++|...++||.||-+== |.- .| .+-++.++-.++.-.+. +.+++|=
T Consensus 92 vpVia--Gvg~~st~~ai~la~~A~~~Gadavlv~~--P~y-------~~--~~~~~l~~~f~~va~a~---~lPiilY 154 (315)
T 3si9_A 92 VPVVA--GAGSNSTSEAVELAKHAEKAGADAVLVVT--PYY-------NR--PNQRGLYTHFSSIAKAI---SIPIIIY 154 (315)
T ss_dssp SCBEE--ECCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCS-------SC--CCHHHHHHHHHHHHHHC---SSCEEEE
T ss_pred CcEEE--eCCCCCHHHHHHHHHHHHhcCCCEEEECC--CCC-------CC--CCHHHHHHHHHHHHHcC---CCCEEEE
Confidence 89999 23433577899999999999999998742 110 11 13456666666554433 4666655
No 186
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=24.21 E-value=28 Score=34.56 Aligned_cols=62 Identities=16% Similarity=0.047 Sum_probs=42.8
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhccHhhhhcCCCCCCCCc--eeeeCCC---CCCC----chHHHHHH
Q 042063 120 PDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKP--IIADGDT---GFGG----TTATVKLC 190 (575)
Q Consensus 120 PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~~e~~~~~~~vd~~lP--IIAD~Dt---GfGg----~~nv~~lv 190 (575)
|...++|.+++.+.|+.+..+. . ... +| |++=.|. |.++ ...+.+=+
T Consensus 119 ~~k~l~~~~e~~~~I~a~~~a~------~----------------~~g--~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra 174 (255)
T 2qiw_A 119 EGKRVREAQEHADYIAAARQAA------D----------------VAG--VDVVINGRTDAVKLGADVFEDPMVEAIKRI 174 (255)
T ss_dssp GTTEECCHHHHHHHHHHHHHHH------H----------------HHT--CCCEEEEEECHHHHCTTTSSSHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHHH------H----------------hcC--CCeEEEEEechhhccCCcchHHHHHHHHHH
Confidence 3456788888888888876531 0 012 56 7776664 5552 45677778
Q ss_pred HHHHHcCceEEEecc
Q 042063 191 KLFVERGAAGVHIED 205 (575)
Q Consensus 191 k~~ieAGaAGIhIED 205 (575)
+.|.+|||.+|-+|=
T Consensus 175 ~a~~eAGAd~i~~e~ 189 (255)
T 2qiw_A 175 KLMEQAGARSVYPVG 189 (255)
T ss_dssp HHHHHHTCSEEEECC
T ss_pred HHHHHcCCcEEEEcC
Confidence 999999999999973
No 187
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=24.14 E-value=1.4e+02 Score=29.83 Aligned_cols=63 Identities=21% Similarity=0.213 Sum_probs=41.6
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+= +|--+...+.+++|...++||.|+-+==-- . .| .+-++.++-.++.-.+. +.+++|=
T Consensus 78 vpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y--------~~--~s~~~l~~~f~~va~a~---~lPiilY 140 (301)
T 3m5v_A 78 VKVLAG--AGSNATHEAVGLAKFAKEHGADGILSVAPY-Y--------NK--PTQQGLYEHYKAIAQSV---DIPVLLY 140 (301)
T ss_dssp CEEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHHC---SSCEEEE
T ss_pred CeEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-C--------CC--CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 899992 443357789999999999999999884221 1 11 14466666666665443 4566654
No 188
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=23.99 E-value=1.6e+02 Score=29.11 Aligned_cols=63 Identities=22% Similarity=0.203 Sum_probs=40.2
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+ -+|--+...+.++++...++||.|+-+==-- . .| .+-++.++-.++.-.+. +.+++|=
T Consensus 71 ~pvia--Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~-y--------~~--~~~~~l~~~f~~ia~a~---~lPiilY 133 (291)
T 3tak_A 71 IPIIA--GTGANSTREAIELTKAAKDLGADAALLVTPY-Y--------NK--PTQEGLYQHYKAIAEAV---ELPLILY 133 (291)
T ss_dssp SCEEE--ECCCSSHHHHHHHHHHHHHHTCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred CeEEE--eCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC-C--------CC--CCHHHHHHHHHHHHHhc---CCCEEEE
Confidence 89998 2443357789999999999999999874211 0 11 13456666666554333 4566554
No 189
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=23.81 E-value=1.3e+02 Score=30.44 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=40.6
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+ -+|--+...+.++++...++||.|+-+==-- . .| .+-++.++-.++.-.+. +.+++|=
T Consensus 93 vpVia--Gvg~~st~eai~la~~A~~~Gadavlv~~P~-y--------~~--~s~~~l~~~f~~va~a~---~lPiilY 155 (314)
T 3qze_A 93 IPVIA--GTGANSTREAVALTEAAKSGGADACLLVTPY-Y--------NK--PTQEGMYQHFRHIAEAV---AIPQILY 155 (314)
T ss_dssp SCEEE--ECCCSSHHHHHHHHHHHHHTTCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHHS---CSCEEEE
T ss_pred CcEEE--eCCCcCHHHHHHHHHHHHHcCCCEEEEcCCC-C--------CC--CCHHHHHHHHHHHHHhc---CCCEEEE
Confidence 89999 2343356789999999999999999874211 1 11 13456666666654433 4566654
No 190
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=23.71 E-value=1.7e+02 Score=26.74 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=21.6
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEecc
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIED 205 (575)
+||++++ |.. .+.++.+.++||.||.+=-
T Consensus 151 ~pvia~G-----GI~--~~~~~~~~~~Ga~~v~vGs 179 (205)
T 1wa3_A 151 VKFVPTG-----GVN--LDNVCEWFKAGVLAVGVGS 179 (205)
T ss_dssp CEEEEBS-----SCC--TTTHHHHHHHTCSCEEECH
T ss_pred CcEEEcC-----CCC--HHHHHHHHHCCCCEEEECc
Confidence 9999984 322 2466888899999998753
No 191
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=23.52 E-value=92 Score=30.90 Aligned_cols=70 Identities=16% Similarity=0.087 Sum_probs=47.2
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
.|| .=.|.|.||.+-+.++.+.+= ...=|.+-|....|- |. -|.++..+++..+.......|.+++|||
T Consensus 6 ~~I-gvfDSGvGGltv~~~i~~~lP--~~~~iy~~D~a~~PY-----G~---ks~~~i~~~~~~~~~~L~~~g~~~IVIA 74 (269)
T 3ist_A 6 QAI-GFIDSGVGGLTVVREVLKQLP--HEQVYYLGDTARCPY-----GP---RDKEEVAKFTWEMTNFLVDRGIKMLVIA 74 (269)
T ss_dssp CCE-EEEESSSTTHHHHHHHHHHCT--TCCEEEEECGGGCCC-----TT---SCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CcE-EEEECCccHHHHHHHHHHHCC--CCcEEEEeCCCCCCC-----CC---CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 464 448999999886666666553 567789999874331 22 3567777777665544445699999887
Q ss_pred e
Q 042063 250 R 250 (575)
Q Consensus 250 R 250 (575)
=
T Consensus 75 C 75 (269)
T 3ist_A 75 C 75 (269)
T ss_dssp C
T ss_pred C
Confidence 4
No 192
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=23.52 E-value=37 Score=34.77 Aligned_cols=83 Identities=22% Similarity=0.287 Sum_probs=52.4
Q ss_pred hcCCcCcEEeeccCCCCHHHHHhHHhhhhhcCCCceeee------cCCcccccccCCCCHHHHHhhHHHHHhcCceeeee
Q 042063 398 AFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAY------NLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFI 471 (575)
Q Consensus 398 a~apyaDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laY------N~SPSFnW~~~G~s~~~i~~F~~~L~~~G~~~Q~I 471 (575)
.||||-|+.| +..|+|.++-. ...+-...|+| +|+|++| -. ++..+++..|..|-..| +--+|
T Consensus 11 ~faPYvd~~~--~~~~~l~~~~~-----~~g~~~v~lAFl~~~~g~c~p~w~--g~-~~~~~~~~~I~~~q~~G-~kVll 79 (311)
T 2dsk_A 11 FFAPYIDMSL--SVHKPLVEYAK-----LTGTKYFTLAFILYSSVYNGPAWA--GS-IPLEKFVDEVRELREIG-GEVII 79 (311)
T ss_dssp EECCEEETTC--TTCCCHHHHHH-----HHSCSEEEEEEEEEETTTTEEEET--TT-BCGGGGHHHHHHHHTTT-CEEEE
T ss_pred cccceEeccc--CCCCCHHHHHH-----hcCCCEEEEEEEeccCCCCcccCC--CC-CchHHHHHHHHHHHHCC-CeEEE
Confidence 4899999988 56777776532 12233334444 4777644 22 45566778888888998 56788
Q ss_pred cchhhhhhh-----hhHHHHHHHHH
Q 042063 472 TLAGFHADA-----LVVDTFAKDYA 491 (575)
Q Consensus 472 tLaG~H~~~-----~~~~~la~~~~ 491 (575)
++.|--..- ....+||..|.
T Consensus 80 SiGGa~Gs~~~~s~~~~~~~a~~~~ 104 (311)
T 2dsk_A 80 AFGGAVGPYLCQQASTPEQLAEWYI 104 (311)
T ss_dssp EEEESSCCCHHHHCSSHHHHHHHHH
T ss_pred EecCCCCccccccccCHHHHHHHHH
Confidence 888864432 23455666543
No 193
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=23.15 E-value=2.2e+02 Score=29.10 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=47.3
Q ss_pred CCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeecccccCchH
Q 042063 181 GGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQ 260 (575)
Q Consensus 181 Gg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTDA~~a~~l~ 260 (575)
+.+....+.++++.++|..+|-| |+| + +.+.-+++|+++|.+. | |+-| |.|+...-.++
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKi--------k~g---~----~~~~~~e~v~avr~a~---g-d~~l--~vD~n~~~~~~ 204 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYL--------KVG---R----GEKLDLEITAAVRGEI---G-DARL--RLDANEGWSVH 204 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE--------ECC---S----CHHHHHHHHHHHHTTS---T-TCEE--EEECTTCCCHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--------CcC---C----CHHHHHHHHHHHHHHc---C-CcEE--EEecCCCCCHH
Confidence 46777888899999999999887 222 2 6788899999999664 5 6544 45887655566
Q ss_pred HHHHHHHH
Q 042063 261 TNVDTRDH 268 (575)
Q Consensus 261 ~aId~R~~ 268 (575)
++++ -.+
T Consensus 205 ~a~~-~~~ 211 (384)
T 2pgw_A 205 DAIN-MCR 211 (384)
T ss_dssp HHHH-HHH
T ss_pred HHHH-HHH
Confidence 6665 444
No 194
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=22.94 E-value=1.2e+02 Score=30.51 Aligned_cols=64 Identities=22% Similarity=0.158 Sum_probs=42.1
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|||+= +|--+...+.+++|...++||.|+-+== |-- .| .+.++.++-.++.-.+. +.+++|=-
T Consensus 94 vpViaG--vg~~~t~~ai~la~~A~~~Gadavlv~~----P~y-----~~--~s~~~l~~~f~~va~a~---~lPiilYn 157 (315)
T 3na8_A 94 VPTIVS--VSDLTTAKTVRRAQFAESLGAEAVMVLP----ISY-----WK--LNEAEVFQHYRAVGEAI---GVPVMLYN 157 (315)
T ss_dssp SCBEEE--CCCSSHHHHHHHHHHHHHTTCSEEEECC----CCS-----SC--CCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred CcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC----CCC-----CC--CCHHHHHHHHHHHHHhC---CCcEEEEe
Confidence 899992 4433577899999999999999999832 210 11 14566666666665443 45666544
No 195
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=22.37 E-value=41 Score=33.67 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=27.6
Q ss_pred CceeeeCCCCCCCch---HHHHHHHHHHHcCceEEEeccCC
Q 042063 170 KPIIADGDTGFGGTT---ATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 170 lPIIAD~DtGfGg~~---nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
+||+.= ||-|+. .+.+.++.+.++||.|+.+=|-.
T Consensus 98 ~Pivlm---~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp 135 (271)
T 3nav_A 98 TPIGLL---MYANLVYARGIDDFYQRCQKAGVDSVLIADVP 135 (271)
T ss_dssp SCEEEE---ECHHHHHHTCHHHHHHHHHHHTCCEEEETTSC
T ss_pred CCEEEE---ecCcHHHHHhHHHHHHHHHHCCCCEEEECCCC
Confidence 899873 676652 35678999999999999998764
No 196
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=22.37 E-value=1.9e+02 Score=26.93 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=45.9
Q ss_pred CceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q 042063 78 TASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMS 156 (575)
Q Consensus 78 ~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~aq~~hDr~q~~~r~~~~ 156 (575)
+..+...++++.++....+ |.+.|.++.. ... ...|+.. |. -++.++.+.+
T Consensus 110 ~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~-f~~------~~~~g~~--~~--~~~~l~~~~~----------------- 161 (221)
T 1yad_A 110 HLHIGRSVHSLEEAVQAEKEDADYVLFGHV-FET------DCKKGLE--GR--GVSLLSDIKQ----------------- 161 (221)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCSEEEEECC-C------------------C--HHHHHHHHHH-----------------
T ss_pred CCEEEEEcCCHHHHHHHHhCCCCEEEECCc-ccc------CCCCCCC--CC--CHHHHHHHHH-----------------
Confidence 3455557888888765444 7888877542 100 1112211 11 2344554432
Q ss_pred HhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCC
Q 042063 157 REERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQS 207 (575)
Q Consensus 157 ~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~ 207 (575)
..+ +||++++ |- ++. .++.+.++||.||-+---.
T Consensus 162 --------~~~--~pvia~G--GI-~~~----nv~~~~~~Ga~gv~vgs~i 195 (221)
T 1yad_A 162 --------RIS--IPVIAIG--GM-TPD----RLRDVKQAGADGIAVMSGI 195 (221)
T ss_dssp --------HCC--SCEEEES--SC-CGG----GHHHHHHTTCSEEEESHHH
T ss_pred --------hCC--CCEEEEC--CC-CHH----HHHHHHHcCCCEEEEhHHh
Confidence 134 9999984 22 444 4556667999999875443
No 197
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=21.95 E-value=1.8e+02 Score=29.06 Aligned_cols=64 Identities=20% Similarity=0.149 Sum_probs=39.8
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+= +|--+...+.++++...++||.|+-+==-- . .|+ +-++.++-.++.-.+.+ +.+++|=
T Consensus 81 vpViaG--vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y--------~~~--s~~~l~~~f~~va~a~~--~lPiilY 144 (303)
T 2wkj_A 81 IKLIAH--VGCVSTAESQQLAASAKRYGFDAVSAVTPF-Y--------YPF--SFEEHCDHYRAIIDSAD--GLPMVVY 144 (303)
T ss_dssp SEEEEE--CCCSSHHHHHHHHHHHHHHTCSEEEEECCC-S--------SCC--CHHHHHHHHHHHHHHHT--TCCEEEE
T ss_pred CcEEEe--cCCCCHHHHHHHHHHHHhCCCCEEEecCCC-C--------CCC--CHHHHHHHHHHHHHhCC--CCCEEEE
Confidence 899982 232246788999999999999999875221 1 111 44666666666544332 1566553
No 198
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=21.58 E-value=1.3e+02 Score=28.95 Aligned_cols=22 Identities=23% Similarity=0.259 Sum_probs=19.3
Q ss_pred chHHHHHHHHHHHcCceEEEec
Q 042063 183 TTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 183 ~~nv~~lvk~~ieAGaAGIhIE 204 (575)
+..+.++++.++++||.||...
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~~ 56 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRIE 56 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE
T ss_pred cchHHHHHHHHHHCCCeEEEEC
Confidence 4578999999999999999874
No 199
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=21.48 E-value=3e+02 Score=27.25 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhhhCCCceeecCCCCHHHHHHHHc-cCCeEeechHHHhhccCCCCCCCCCCCCCCcCcHHHHHHHHHHH
Q 042063 62 MAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAK-HLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFA 140 (575)
Q Consensus 62 ~A~kL~~lL~~~~~~~~~l~~~Ga~D~~sA~~~a~-gf~AIy~SG~~vAa~~~~~~~g~PD~~~~p~~tv~~~v~rI~~a 140 (575)
..+.|.+..+++ +...+..++|.-.+....+ |.+.|.+++. ... .-.|| + +.+.+|...
T Consensus 150 ~l~~l~~~a~~l----Gl~~lvev~t~ee~~~A~~~Gad~IGv~~r----~l~---~~~~d-----l----~~~~~l~~~ 209 (272)
T 3qja_A 150 VLVSMLDRTESL----GMTALVEVHTEQEADRALKAGAKVIGVNAR----DLM---TLDVD-----R----DCFARIAPG 209 (272)
T ss_dssp HHHHHHHHHHHT----TCEEEEEESSHHHHHHHHHHTCSEEEEESB----CTT---TCCBC-----T----THHHHHGGG
T ss_pred HHHHHHHHHHHC----CCcEEEEcCCHHHHHHHHHCCCCEEEECCC----ccc---ccccC-----H----HHHHHHHHh
Confidence 344444444432 5566788999887654443 8888887741 100 00122 1 233444210
Q ss_pred hhhhHHHHHHHHhhccHhhhhcCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEecc
Q 042063 141 QQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIED 205 (575)
Q Consensus 141 q~~hDr~q~~~r~~~~~e~~~~~~~vd~~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIED 205 (575)
.+ .+ +|||+ +.|..++ +.++.+.++||.||-+-=
T Consensus 210 ----------------------v~-~~--~pvVa--egGI~t~----edv~~l~~~GadgvlVGs 243 (272)
T 3qja_A 210 ----------------------LP-SS--VIRIA--ESGVRGT----ADLLAYAGAGADAVLVGE 243 (272)
T ss_dssp ----------------------SC-TT--SEEEE--ESCCCSH----HHHHHHHHTTCSEEEECH
T ss_pred ----------------------Cc-cc--CEEEE--ECCCCCH----HHHHHHHHcCCCEEEEcH
Confidence 01 14 89998 4454444 556778899999998743
No 200
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=21.47 E-value=1.2e+02 Score=30.17 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=43.8
Q ss_pred eeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeec
Q 042063 173 IADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTD 252 (575)
Q Consensus 173 IAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTD 252 (575)
|.=+|.|.|+. .+++.+.+..- ...-+++-|+...|- | ..+.++..+++..+-......|.|.+|||=.-
T Consensus 27 IGvfDsG~Ggl-tv~~~i~~~~P-~~~~iy~~D~~~~py------G--~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNT 96 (290)
T 2vvt_A 27 IGLIDSGVGGL-TVLKEALKQLP-NERLIYLGDTARCPY------G--PRPAEQVVQFTWEMADFLLKKRIKMLVIACNT 96 (290)
T ss_dssp EEEEESSSTTH-HHHHHHHHHCT-TSCEEEEECTTTCCC------T--TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHH
T ss_pred EEEEeCCCcHH-HHHHHHHHHCC-CccEEEecccccCCC------C--CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcc
Confidence 34467788884 45555555433 346788899963221 1 23567777777665544444589998887544
Q ss_pred c
Q 042063 253 A 253 (575)
Q Consensus 253 A 253 (575)
+
T Consensus 97 a 97 (290)
T 2vvt_A 97 A 97 (290)
T ss_dssp H
T ss_pred h
Confidence 3
No 201
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=21.35 E-value=1.3e+02 Score=30.27 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=0.0
Q ss_pred cCCCCHHHHHhHHhhhhhcCCCceeeecCCcc--------------------------cccccCCC---CHHHHHhhHHH
Q 042063 410 TASPDLAECTKFAGGIKSKHPEIMLAYNLSPS--------------------------FNWDASGM---TDEEMKDFIPR 460 (575)
Q Consensus 410 t~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPS--------------------------FnW~~~G~---s~~~i~~F~~~ 460 (575)
+.+.|.+.-+++.++||+..|+ +.-|+|-+ .||... . +.+.++.|...
T Consensus 57 ~~s~d~~~~~e~~~~IR~~~pd--~ii~~Ttg~~~~~~e~R~~~~~~~Pe~aSl~~gs~Nf~~~-v~~N~~~~~~~~~~~ 133 (275)
T 3no5_A 57 TPTSNPDRFALVLEGIRKHAPG--MITQVSTGGRSGAGNERGAMLSLRPDMASLATGSVNFPTR-VYDNPPELVDWLAAE 133 (275)
T ss_dssp CEECCHHHHHHHHHHHHHHSTT--CEEEECCCCCTTCCGGGGTTGGGCCSEEEEECSCEECSSS-EECCCHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHhCCC--eEEEeCCCCCCCCHHHHhhHhhcCCCEEEecCcccccccc-cccCCHHHHHHHHHH
Q ss_pred HHhcCceeeeecchhhhhhhhhHHHHHHHHHHhhH
Q 042063 461 IAKLGFCWQFITLAGFHADALVVDTFAKDYARRGM 495 (575)
Q Consensus 461 L~~~G~~~Q~ItLaG~H~~~~~~~~la~~~~~~GM 495 (575)
|.+.|.+.||+-.-.=|..+ ++.|.++|+
T Consensus 134 ~~e~Gi~pE~e~fd~g~l~~------~~~l~~~Gl 162 (275)
T 3no5_A 134 MKTYGIKPEVEAFDLSMIFQ------AAAMQAAGA 162 (275)
T ss_dssp HHHTTCEEEEEESSTHHHHH------HHHHHHHTS
T ss_pred HHHcCCeeEEEEEcHHHHHH------HHHHHHCCC
No 202
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=21.22 E-value=3.3e+02 Score=27.85 Aligned_cols=80 Identities=18% Similarity=0.083 Sum_probs=51.9
Q ss_pred CceeeeCCCC-CCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTG-FGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtG-fGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|+.+-+=.+ .+.+..+.+.++++.++|..+|-|- +||. +.++-+++|+++|.+. |+|+-|.
T Consensus 136 vp~~~~g~~~~~~~~~~~~~~a~~~~~~Gf~~vKik--------~g~~------~~~~~~e~v~avR~a~---G~d~~l~ 198 (391)
T 2qgy_A 136 VPIYATCWSDLKKDTNDYLRQIEKFYGKKYGGIKIY--------PMLD------SLSISIQFVEKVREIV---GDELPLM 198 (391)
T ss_dssp EEEEEECCCSSCCCHHHHHHHHHHHHHTTCSCEEEC--------CCCS------SHHHHHHHHHHHHHHH---CSSSCEE
T ss_pred cceEEecccCCCCCHHHHHHHHHHHHHcCCCEEEEc--------cCCC------hHHHHHHHHHHHHHHh---CCCCEEE
Confidence 6665521112 2356777888999999999888862 2321 2578899999999664 7776554
Q ss_pred EeecccccCchHHHHHHHHHh
Q 042063 249 ARTDAEAATLIQTNVDTRDHQ 269 (575)
Q Consensus 249 ARTDA~~a~~l~~aId~R~~a 269 (575)
.|+...-.++++++ ..+.
T Consensus 199 --vDan~~~~~~~a~~-~~~~ 216 (391)
T 2qgy_A 199 --LDLAVPEDLDQTKS-FLKE 216 (391)
T ss_dssp --EECCCCSCHHHHHH-HHHH
T ss_pred --EEcCCCCCHHHHHH-HHHH
Confidence 37765555677766 4444
No 203
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=21.20 E-value=18 Score=31.79 Aligned_cols=14 Identities=0% Similarity=0.019 Sum_probs=11.9
Q ss_pred HHHHHHHhhccCCCCC
Q 042063 21 EVAEVQAWWNSERFRL 36 (575)
Q Consensus 21 ~~~~i~~ww~~~R~~~ 36 (575)
-+.+++.|| |||..
T Consensus 86 i~~ql~~ww--prWq~ 99 (105)
T 1t4y_A 86 LTDQLANQL--PQWLV 99 (105)
T ss_dssp HHHHHHHHH--HHHHT
T ss_pred HHHHHHHHh--HHHHh
Confidence 468899999 99984
No 204
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=21.14 E-value=2.8e+02 Score=29.00 Aligned_cols=86 Identities=14% Similarity=0.085 Sum_probs=55.1
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVA 249 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiA 249 (575)
+|+-+-.- +.+++..+.+.++++.+.|..+|-|- +||.....--.+++-+++|+|+|.+. |+|+-|..
T Consensus 168 v~~y~s~~-~~~~~e~~~~~a~~~~~~Gf~~iKik--------~g~gp~dg~~~~~~die~v~avReav---G~d~~L~v 235 (412)
T 3stp_A 168 IPVYYSKL-YAGSIEAMQKEAEEAMKGGYKAFKSR--------FGYGPKDGMPGMRENLKRVEAVREVI---GYDNDLML 235 (412)
T ss_dssp EEEEEECC-CSCCHHHHHHHHHHHHTTTCSEEEEE--------CCCCGGGHHHHHHHHHHHHHHHHHHH---CSSSEEEE
T ss_pred EEEEEEec-CCCCHHHHHHHHHHHHHcCCCEEEEe--------cccCcccccchHHHHHHHHHHHHHHc---CCCCeEEE
Confidence 77766321 11357788888999999999998762 34321000023578899999999665 78876543
Q ss_pred eecccccCchHHHHHHHHHhh
Q 042063 250 RTDAEAATLIQTNVDTRDHQF 270 (575)
Q Consensus 250 RTDA~~a~~l~~aId~R~~aY 270 (575)
|+...-.++++++ -.++.
T Consensus 236 --DaN~~~~~~~Ai~-~~~~L 253 (412)
T 3stp_A 236 --ECYMGWNLDYAKR-MLPKL 253 (412)
T ss_dssp --ECTTCSCHHHHHH-HHHHH
T ss_pred --ECCCCCCHHHHHH-HHHHH
Confidence 7776666777775 44433
No 205
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=21.03 E-value=1.5e+02 Score=25.93 Aligned_cols=60 Identities=20% Similarity=0.417 Sum_probs=45.9
Q ss_pred CcEEeeccCCCCHHHHHhHHhhhhhcCCCceeeecCCccccccc--CCCCHHHHHhhHHHHHhc-Cc
Q 042063 403 ADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDA--SGMTDEEMKDFIPRIAKL-GF 466 (575)
Q Consensus 403 aDl~W~Et~~P~l~~a~~Fa~~i~~~~P~~~laYN~SPSFnW~~--~G~s~~~i~~F~~~L~~~-G~ 466 (575)
.-++|+..+...+ .+|++.+ +.+|+...+|-.+..||.-. ..=|.+++..|+..|.++ |.
T Consensus 68 ~a~v~v~~~~~~~---~~~~~~l-~~~p~V~~~~~~tG~~d~~~~v~~~d~~~l~~~~~~l~~~~gV 130 (151)
T 2cyy_A 68 LAFILVKVKAGKY---SEVASNL-AKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIGSIPGV 130 (151)
T ss_dssp EEEEEEEECTTCH---HHHHHHH-HTCTTEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHTSTTE
T ss_pred EEEEEEEECcccH---HHHHHHH-hcCCCeeEeeEecCCCCEEEEEEECCHHHHHHHHHHHhCCCCE
Confidence 3578888874433 5677777 56999999999999999754 223778999999889988 54
No 206
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=20.69 E-value=73 Score=30.77 Aligned_cols=29 Identities=38% Similarity=0.621 Sum_probs=21.0
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
+||++ |+| . +..+.++.+.++||.||++=
T Consensus 202 ~pI~v----gGG-I-~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 202 KPVAV----GFG-I-SKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp SCEEE----ESC-C-CSHHHHHHHHHTTCSEEEEC
T ss_pred CeEEE----ECC-c-CCHHHHHHHHHcCCCEEEEC
Confidence 99999 444 2 12366777888999999964
No 207
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=20.56 E-value=2.2e+02 Score=26.97 Aligned_cols=69 Identities=12% Similarity=0.079 Sum_probs=44.1
Q ss_pred eeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 172 IIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 172 IIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
++.-.|+|.+....+.++++..++.|...|.+-|-.+ +.. .-.+.++....+...+......+.++-|.
T Consensus 12 t~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~-~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~i~i~ 80 (247)
T 2wje_A 12 IVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRR-KGM-------FETPEEKIAENFLQVREIAKEVASDLVIA 80 (247)
T ss_dssp CSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEB-TTT-------BCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CCC-------CCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 3445677888887888999999999999999999863 111 11345655555555554332223444343
No 208
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=20.52 E-value=2e+02 Score=30.00 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=26.3
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
+|||+= +|--+...+.++++...++||.|+-+=
T Consensus 129 vpViaG--vg~~st~eai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 129 IKVIGN--TGSNSTREAIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp SEEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CeEEEe--cCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 899982 342256788999999999999999874
No 209
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=20.45 E-value=86 Score=32.25 Aligned_cols=54 Identities=15% Similarity=0.203 Sum_probs=41.3
Q ss_pred HhHHhhhhhcCC-CceeeecCCcccccccCC-CCHHHHHhhHHHHHhcCceeeeecc
Q 042063 419 TKFAGGIKSKHP-EIMLAYNLSPSFNWDASG-MTDEEMKDFIPRIAKLGFCWQFITL 473 (575)
Q Consensus 419 ~~Fa~~i~~~~P-~~~laYN~SPSFnW~~~G-~s~~~i~~F~~~L~~~G~~~Q~ItL 473 (575)
.+-.++|++..| +..+.+.+||. .|...| ++.++...|.+.|.+.|.-+--|+.
T Consensus 212 ~eiv~aVr~avg~d~pV~vRis~~-~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 212 LETLAAVREVWPENLPLTARFGVL-EYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHHHHHHTTSCTTSCEEEEEEEE-CSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEEEecch-hcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 355778888886 56799999994 676667 7889999999999999965444443
No 210
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=20.31 E-value=1.4e+02 Score=28.71 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=24.0
Q ss_pred eeeeCCCCCCC----chHHHHHHHHHHHcCceEEEec
Q 042063 172 IIADGDTGFGG----TTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 172 IIAD~DtGfGg----~~nv~~lvk~~ieAGaAGIhIE 204 (575)
|||=+..=-|+ +..+.++++.++++||+||...
T Consensus 20 livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~ 56 (229)
T 3q58_A 20 LIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE 56 (229)
T ss_dssp EEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC
Confidence 44444443333 4578899999999999999874
No 211
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=20.30 E-value=1.8e+02 Score=28.84 Aligned_cols=63 Identities=19% Similarity=0.170 Sum_probs=39.8
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
+|||+= +|--+...+.+++|...++||.|+-+==-- . .+ .+-++.++-.++.-.+. +.+++|=
T Consensus 70 vpviaG--vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y--------~~--~s~~~l~~~f~~va~a~---~lPiilY 132 (294)
T 2ehh_A 70 IKVIAG--TGGNATHEAVHLTAHAKEVGADGALVVVPY-Y--------NK--PTQRGLYEHFKTVAQEV---DIPIIIY 132 (294)
T ss_dssp SEEEEE--CCCSCHHHHHHHHHHHHHTTCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred CcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECCCC-C--------CC--CCHHHHHHHHHHHHHhc---CCCEEEE
Confidence 899963 343356788999999999999999875221 1 11 14466666666554332 4565553
No 212
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=20.15 E-value=1.7e+02 Score=29.75 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=38.8
Q ss_pred CceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEE
Q 042063 170 KPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVL 247 (575)
Q Consensus 170 lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vI 247 (575)
+|||+= +|--+...+.++++...++||.||-+==-- . .| .+-++.++-.+++-.+. +.+++|
T Consensus 104 vpViaG--vg~~st~eai~la~~A~~~Gadavlv~~P~-Y--------~~--~s~~~l~~~f~~VA~a~---~lPiil 165 (332)
T 2r8w_A 104 RTLMAG--IGALRTDEAVALAKDAEAAGADALLLAPVS-Y--------TP--LTQEEAYHHFAAVAGAT---ALPLAI 165 (332)
T ss_dssp SEEEEE--ECCSSHHHHHHHHHHHHHHTCSEEEECCCC-S--------SC--CCHHHHHHHHHHHHHHC---SSCEEE
T ss_pred CcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECCCC-C--------CC--CCHHHHHHHHHHHHHhc---CCCEEE
Confidence 899982 332246778899999999999999875211 1 11 14456666666554332 456554
No 213
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=20.09 E-value=3.4e+02 Score=27.10 Aligned_cols=66 Identities=17% Similarity=0.151 Sum_probs=41.3
Q ss_pred CCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEE
Q 042063 169 LKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLV 248 (575)
Q Consensus 169 ~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIi 248 (575)
.+|||+= +|.-+...+.++++...++||.|+-+==-- . -++-.+-++.++-.+++-.+. +.+++|=
T Consensus 83 r~pviaG--vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y--------~~~~~s~~~l~~~f~~ia~a~---~lPiilY 148 (307)
T 3s5o_A 83 NRLLLAG--SGCESTQATVEMTVSMAQVGADAAMVVTPC-Y--------YRGRMSSAALIHHYTKVADLS---PIPVVLY 148 (307)
T ss_dssp TSEEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEECCC-T--------TGGGCCHHHHHHHHHHHHHHC---SSCEEEE
T ss_pred CCcEEEe--cCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-c--------CCCCCCHHHHHHHHHHHHhhc---CCCEEEE
Confidence 4899982 443356788999999999999999874211 1 111124466666666664333 4566554
No 214
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.05 E-value=2.3e+02 Score=28.13 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=26.9
Q ss_pred CCceeeeCCCCCCCchHHHHHHHHHHHcCceEEEec
Q 042063 169 LKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIE 204 (575)
Q Consensus 169 ~lPIIAD~DtGfGg~~nv~~lvk~~ieAGaAGIhIE 204 (575)
.+|||+= +|--+...+.++++...++||.|+-+=
T Consensus 72 r~pviaG--vg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 72 PSRIVTG--VLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp GGGEEEE--ECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCcEEEe--CCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3899963 343356788999999999999999885
No 215
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=20.05 E-value=1.7e+02 Score=29.49 Aligned_cols=64 Identities=17% Similarity=0.124 Sum_probs=40.8
Q ss_pred CCceeeeCCCCCCCchHHHHHHHHHHHcCc-eEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEE
Q 042063 169 LKPIIADGDTGFGGTTATVKLCKLFVERGA-AGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVL 247 (575)
Q Consensus 169 ~lPIIAD~DtGfGg~~nv~~lvk~~ieAGa-AGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vI 247 (575)
.+|||+= +|--+...+.++++...++|+ .|+-+==-- . .| .+-++.++-.++.-.+. +.+++|
T Consensus 76 rvpViaG--vg~~~t~~ai~la~~A~~~Ga~davlv~~P~-y--------~~--~s~~~l~~~f~~va~a~---~lPiil 139 (311)
T 3h5d_A 76 RVPLIAG--VGTNDTRDSIEFVKEVAEFGGFAAGLAIVPY-Y--------NK--PSQEGMYQHFKAIADAS---DLPIII 139 (311)
T ss_dssp SSCEEEE--CCCSSHHHHHHHHHHHHHSCCCSEEEEECCC-S--------SC--CCHHHHHHHHHHHHHSC---SSCEEE
T ss_pred CCcEEEe--CCCcCHHHHHHHHHHHHhcCCCcEEEEcCCC-C--------CC--CCHHHHHHHHHHHHHhC---CCCEEE
Confidence 3899993 443357789999999999997 898774211 1 11 14466666666665433 456665
Q ss_pred E
Q 042063 248 V 248 (575)
Q Consensus 248 i 248 (575)
=
T Consensus 140 Y 140 (311)
T 3h5d_A 140 Y 140 (311)
T ss_dssp E
T ss_pred E
Confidence 4
No 216
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=20.02 E-value=1.4e+02 Score=29.53 Aligned_cols=67 Identities=15% Similarity=0.093 Sum_probs=41.6
Q ss_pred CCCCCCCchHHHHHHHHHHHcCceEEEeccCCCcccccCCCCCCcccCHHHHHHHHHHHHHhhhhcCCceEEEEeec
Q 042063 176 GDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTD 252 (575)
Q Consensus 176 ~DtGfGg~~nv~~lvk~~ieAGaAGIhIEDQ~~~~KkCGH~~Gk~Lvp~~E~v~RL~AAR~a~d~~g~d~vIiARTD 252 (575)
+|+|.||.. +.+.+++..- ...-|++-|+...|- | ..+.++..+++..+.......|.|++|||=.-
T Consensus 28 fDsG~Gglt-v~~~i~~~~P-~~~~iy~~D~~~~Py------g--~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNT 94 (286)
T 2jfq_A 28 IDSGVGGLT-VAKEIMRQLP-NETIYYLGDIGRCPY------G--PRPGEQVKQYTVEIARKLMEFDIKMLVIACNT 94 (286)
T ss_dssp EESSSTTHH-HHHHHHHHCT-TCCEEEEECTTTCCC------T--TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHH
T ss_pred EeCCCCcHH-HHHHHHHHCC-CccEEEeccCCCCCc------C--CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 488988654 4444443322 455788899974331 1 23567788887766554444689998887443
Done!