Query 042071
Match_columns 632
No_of_seqs 246 out of 1706
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 02:32:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042071.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042071hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 6E-163 1E-167 1341.8 50.7 579 1-628 9-591 (598)
2 PLN02222 phosphoinositide phos 100.0 9E-162 2E-166 1331.1 50.4 570 1-628 5-574 (581)
3 PLN02228 Phosphoinositide phos 100.0 3E-158 6E-163 1300.3 50.1 549 1-627 4-553 (567)
4 PLN02952 phosphoinositide phos 100.0 1E-156 3E-161 1294.0 47.3 572 1-627 18-591 (599)
5 KOG0169 Phosphoinositide-speci 100.0 1E-157 3E-162 1292.5 38.9 548 1-628 186-737 (746)
6 PLN02223 phosphoinositide phos 100.0 7E-150 1E-154 1216.3 44.2 518 6-628 1-530 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 2E-141 4E-146 1157.9 34.3 570 16-625 216-813 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 1E-128 3E-133 1047.0 24.5 564 34-626 236-1180(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 2E-111 5E-116 842.4 20.8 258 108-470 1-258 (258)
10 cd08624 PI-PLCc_beta2 Catalyti 100.0 5E-110 1E-114 835.5 22.3 256 108-470 1-261 (261)
11 cd08633 PI-PLCc_eta2 Catalytic 100.0 3E-110 7E-115 831.0 20.9 253 108-470 1-254 (254)
12 cd08632 PI-PLCc_eta1 Catalytic 100.0 6E-110 1E-114 827.3 20.3 252 108-470 1-253 (253)
13 cd08630 PI-PLCc_delta3 Catalyt 100.0 9E-110 2E-114 833.4 20.7 257 108-470 1-258 (258)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 2E-109 4E-114 829.6 21.0 256 108-470 1-257 (257)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 3E-109 6E-114 828.6 20.2 257 108-470 1-258 (258)
16 cd08626 PI-PLCc_beta4 Catalyti 100.0 5E-109 1E-113 826.4 20.8 253 108-470 1-257 (257)
17 cd08596 PI-PLCc_epsilon Cataly 100.0 4E-109 8E-114 826.1 19.2 249 108-470 1-254 (254)
18 cd08591 PI-PLCc_beta Catalytic 100.0 2E-108 5E-113 821.5 21.4 253 108-470 1-257 (257)
19 cd08623 PI-PLCc_beta1 Catalyti 100.0 2E-108 4E-113 822.7 20.6 253 108-470 1-258 (258)
20 cd08593 PI-PLCc_delta Catalyti 100.0 3E-108 7E-113 824.5 20.6 257 108-470 1-257 (257)
21 cd08625 PI-PLCc_beta3 Catalyti 100.0 9E-108 2E-112 822.8 21.9 252 109-470 2-258 (258)
22 cd08628 PI-PLCc_gamma2 Catalyt 100.0 1E-107 3E-112 816.0 18.5 252 108-470 1-254 (254)
23 cd08594 PI-PLCc_eta Catalytic 100.0 4E-107 8E-112 798.1 20.4 226 108-470 1-227 (227)
24 cd08597 PI-PLCc_PRIP_metazoa C 100.0 2E-105 4E-110 805.5 20.2 260 108-470 1-260 (260)
25 cd08627 PI-PLCc_gamma1 Catalyt 100.0 2E-104 3E-109 779.1 20.9 228 108-469 1-228 (229)
26 cd08558 PI-PLCc_eukaryota Cata 100.0 2E-104 5E-109 781.3 21.2 226 108-470 1-226 (226)
27 cd08598 PI-PLC1c_yeast Catalyt 100.0 4E-104 1E-108 781.7 21.2 230 108-469 1-230 (231)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 2E-103 5E-108 774.3 20.6 229 108-470 1-229 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 7E-102 1E-106 765.8 20.6 228 108-470 1-228 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 2E-63 4.4E-68 514.0 18.3 252 108-470 1-274 (274)
31 smart00149 PLCYc Phospholipase 100.0 8.8E-46 1.9E-50 329.7 8.1 115 366-482 1-115 (115)
32 PF00387 PI-PLC-Y: Phosphatidy 100.0 3.8E-46 8.2E-51 334.6 4.4 118 364-483 1-118 (118)
33 smart00148 PLCXc Phospholipase 100.0 2.4E-41 5.2E-46 313.8 12.6 135 109-245 1-135 (135)
34 PF00388 PI-PLC-X: Phosphatidy 100.0 1.3E-37 2.8E-42 293.2 12.0 144 111-256 1-146 (146)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 1.6E-21 3.4E-26 202.8 11.8 148 109-256 3-209 (324)
36 cd08590 PI-PLCc_Rv2075c_like C 99.8 5.3E-19 1.1E-23 182.0 11.5 144 108-254 3-168 (267)
37 cd08395 C2C_Munc13 C2 domain t 99.7 7.7E-17 1.7E-21 146.7 11.9 105 504-616 1-111 (120)
38 cd00275 C2_PLC_like C2 domain 99.7 2E-16 4.3E-21 144.9 13.1 116 503-626 2-119 (128)
39 cd08557 PI-PLCc_bacteria_like 99.6 1.1E-15 2.4E-20 158.0 9.9 144 110-256 4-158 (271)
40 cd08677 C2A_Synaptotagmin-13 C 99.6 2.6E-15 5.6E-20 135.5 9.6 99 502-613 13-115 (118)
41 cd08381 C2B_PI3K_class_II C2 d 99.6 9.4E-15 2E-19 133.6 12.0 97 503-609 13-112 (122)
42 cd04036 C2_cPLA2 C2 domain pre 99.6 1.2E-14 2.6E-19 132.0 11.8 102 505-618 2-106 (119)
43 cd08682 C2_Rab11-FIP_classI C2 99.6 1.3E-14 2.8E-19 133.2 11.0 103 505-621 1-113 (126)
44 cd08406 C2B_Synaptotagmin-12 C 99.6 6.4E-15 1.4E-19 137.2 9.0 110 503-621 15-127 (136)
45 cd08379 C2D_MCTP_PRT_plant C2 99.6 2E-14 4.2E-19 132.1 11.7 107 505-623 2-117 (126)
46 cd04010 C2B_RasA3 C2 domain se 99.6 3.5E-14 7.6E-19 134.0 12.9 113 504-627 1-132 (148)
47 cd04029 C2A_SLP-4_5 C2 domain 99.5 2.8E-14 6.1E-19 130.9 11.2 107 502-616 14-125 (125)
48 cd08393 C2A_SLP-1_2 C2 domain 99.5 3.7E-14 8.1E-19 130.1 11.4 98 503-609 15-115 (125)
49 cd04016 C2_Tollip C2 domain pr 99.5 5.5E-14 1.2E-18 128.2 11.9 104 503-622 2-110 (121)
50 cd04028 C2B_RIM1alpha C2 domai 99.5 9.3E-14 2E-18 130.7 13.3 108 503-619 29-140 (146)
51 cd04019 C2C_MCTP_PRT_plant C2 99.5 5.5E-14 1.2E-18 133.1 11.6 102 505-620 2-111 (150)
52 cd08392 C2A_SLP-3 C2 domain fi 99.5 6.5E-14 1.4E-18 129.1 11.5 104 503-615 15-127 (128)
53 cd04042 C2A_MCTP_PRT C2 domain 99.5 7.4E-14 1.6E-18 127.1 11.6 103 505-621 2-107 (121)
54 cd04039 C2_PSD C2 domain prese 99.5 4.6E-14 9.9E-19 126.3 10.0 97 504-610 2-99 (108)
55 cd08692 C2B_Tac2-N C2 domain s 99.5 4E-14 8.7E-19 130.8 9.9 104 501-613 12-118 (135)
56 cd04041 C2A_fungal C2 domain f 99.5 6.2E-14 1.3E-18 125.8 9.2 102 504-616 2-107 (111)
57 cd08407 C2B_Synaptotagmin-13 C 99.5 4.3E-14 9.4E-19 131.8 8.3 112 503-621 15-129 (138)
58 cd04050 C2B_Synaptotagmin-like 99.5 1.4E-13 3E-18 122.3 10.8 97 505-618 2-103 (105)
59 cd08404 C2B_Synaptotagmin-4 C2 99.5 4.8E-14 1E-18 131.2 7.8 112 503-623 15-129 (136)
60 cd04031 C2A_RIM1alpha C2 domai 99.5 2.8E-13 6E-18 123.7 12.3 105 502-615 15-124 (125)
61 PF09279 EF-hand_like: Phospho 99.5 1.7E-14 3.7E-19 122.7 3.7 81 22-108 1-83 (83)
62 cd08688 C2_KIAA0528-like C2 do 99.5 1.3E-13 2.7E-18 123.6 9.3 101 505-618 1-110 (110)
63 cd04015 C2_plant_PLD C2 domain 99.5 2.6E-13 5.6E-18 129.7 11.9 120 503-631 7-153 (158)
64 cd04032 C2_Perforin C2 domain 99.5 3E-13 6.6E-18 124.4 11.8 93 502-609 27-120 (127)
65 cd08376 C2B_MCTP_PRT C2 domain 99.5 2.6E-13 5.6E-18 122.4 11.2 104 505-622 2-108 (116)
66 cd08375 C2_Intersectin C2 doma 99.5 2.4E-13 5.2E-18 126.7 10.8 103 503-619 15-125 (136)
67 cd08385 C2A_Synaptotagmin-1-5- 99.5 3.1E-13 6.7E-18 123.4 11.3 97 503-610 16-114 (124)
68 cd04018 C2C_Ferlin C2 domain t 99.5 2.5E-13 5.4E-18 128.6 10.8 96 505-608 2-106 (151)
69 cd08685 C2_RGS-like C2 domain 99.5 2.2E-13 4.8E-18 124.0 9.9 97 503-609 12-110 (119)
70 cd04022 C2A_MCTP_PRT_plant C2 99.5 1.7E-13 3.7E-18 125.8 9.3 101 504-618 1-109 (127)
71 cd08680 C2_Kibra C2 domain fou 99.5 2.7E-13 5.9E-18 124.3 10.3 97 503-607 14-112 (124)
72 cd08402 C2B_Synaptotagmin-1 C2 99.5 1E-13 2.2E-18 128.8 7.6 111 503-622 15-128 (136)
73 cd08681 C2_fungal_Inn1p-like C 99.4 5.5E-13 1.2E-17 120.6 11.2 100 504-618 2-105 (118)
74 cd08387 C2A_Synaptotagmin-8 C2 99.4 6E-13 1.3E-17 121.6 11.3 96 503-609 16-113 (124)
75 cd04030 C2C_KIAA1228 C2 domain 99.4 6E-13 1.3E-17 121.9 11.3 98 503-609 16-117 (127)
76 cd08384 C2B_Rabphilin_Doc2 C2 99.4 2.2E-13 4.8E-18 126.0 8.2 112 502-622 12-126 (133)
77 cd04040 C2D_Tricalbin-like C2 99.4 7.7E-13 1.7E-17 119.0 11.5 105 505-622 1-108 (115)
78 cd08378 C2B_MCTP_PRT_plant C2 99.4 6.9E-13 1.5E-17 121.1 11.2 98 505-621 2-107 (121)
79 cd08521 C2A_SLP C2 domain firs 99.4 8E-13 1.7E-17 120.2 11.5 100 502-609 13-114 (123)
80 cd04011 C2B_Ferlin C2 domain s 99.4 5.8E-13 1.3E-17 119.4 10.2 98 503-618 4-111 (111)
81 cd04009 C2B_Munc13-like C2 dom 99.4 8E-13 1.7E-17 122.5 11.3 98 503-607 16-117 (133)
82 cd08403 C2B_Synaptotagmin-3-5- 99.4 2.4E-13 5.3E-18 126.0 7.8 111 503-622 14-127 (134)
83 cd04051 C2_SRC2_like C2 domain 99.4 5.7E-13 1.2E-17 121.8 9.9 107 504-623 1-120 (125)
84 cd08410 C2B_Synaptotagmin-17 C 99.4 2.8E-13 6.1E-18 126.0 7.9 111 503-622 14-128 (135)
85 cd04025 C2B_RasA1_RasA4 C2 dom 99.4 9.3E-13 2E-17 120.1 11.2 100 505-618 2-104 (123)
86 KOG1030 Predicted Ca2+-depende 99.4 3.1E-13 6.8E-18 127.1 7.9 92 503-609 6-97 (168)
87 cd08377 C2C_MCTP_PRT C2 domain 99.4 1.3E-12 2.8E-17 118.1 11.8 104 504-622 2-106 (119)
88 cd08388 C2A_Synaptotagmin-4-11 99.4 6.9E-13 1.5E-17 122.3 10.0 95 503-608 16-114 (128)
89 cd08405 C2B_Synaptotagmin-7 C2 99.4 4.3E-13 9.2E-18 124.7 7.8 111 503-622 15-128 (136)
90 cd04033 C2_NEDD4_NEDD4L C2 dom 99.4 1.2E-12 2.7E-17 120.8 10.6 107 504-618 1-116 (133)
91 cd04048 C2A_Copine C2 domain f 99.4 1.2E-12 2.6E-17 119.0 9.9 105 509-620 6-117 (120)
92 cd08400 C2_Ras_p21A1 C2 domain 99.4 2.4E-12 5.3E-17 118.2 11.8 101 503-620 4-107 (126)
93 cd04026 C2_PKC_alpha_gamma C2 99.4 2.4E-12 5.2E-17 118.8 11.8 112 503-623 13-127 (131)
94 cd08382 C2_Smurf-like C2 domai 99.4 2.4E-12 5.3E-17 117.7 11.0 102 505-621 2-109 (123)
95 cd04043 C2_Munc13_fungal C2 do 99.4 3.1E-12 6.8E-17 117.0 11.4 107 504-622 2-114 (126)
96 cd08389 C2A_Synaptotagmin-14_1 99.4 2.5E-12 5.3E-17 117.9 10.7 95 503-609 16-113 (124)
97 cd08390 C2A_Synaptotagmin-15-1 99.4 2.6E-12 5.7E-17 117.0 10.8 102 503-615 14-121 (123)
98 cd08373 C2A_Ferlin C2 domain f 99.4 2.3E-12 4.9E-17 118.3 10.4 100 509-624 2-106 (127)
99 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.4 3E-12 6.5E-17 122.9 11.5 97 502-607 26-125 (162)
100 cd08386 C2A_Synaptotagmin-7 C2 99.4 2.4E-12 5.3E-17 117.6 10.4 97 502-609 15-114 (125)
101 cd08409 C2B_Synaptotagmin-15 C 99.4 2E-12 4.3E-17 120.7 9.0 97 503-609 15-113 (137)
102 cd08391 C2A_C2C_Synaptotagmin_ 99.4 5.9E-12 1.3E-16 114.0 11.9 109 504-621 2-114 (121)
103 cd04037 C2E_Ferlin C2 domain f 99.4 3.6E-12 7.9E-17 116.8 10.5 91 505-607 2-92 (124)
104 cd04035 C2A_Rabphilin_Doc2 C2 99.4 3.6E-12 7.8E-17 116.3 10.1 97 503-609 15-114 (123)
105 cd04024 C2A_Synaptotagmin-like 99.3 5.7E-12 1.2E-16 115.3 11.0 102 504-619 2-111 (128)
106 cd08678 C2_C21orf25-like C2 do 99.3 3.6E-12 7.7E-17 117.0 9.4 101 505-620 1-104 (126)
107 cd08408 C2B_Synaptotagmin-14_1 99.3 3.3E-12 7.3E-17 119.3 9.4 98 503-608 15-114 (138)
108 cd00276 C2B_Synaptotagmin C2 d 99.3 1.6E-12 3.4E-17 119.9 7.1 112 503-623 14-128 (134)
109 cd04046 C2_Calpain C2 domain p 99.3 1.5E-11 3.2E-16 113.0 13.3 99 503-617 3-102 (126)
110 cd04038 C2_ArfGAP C2 domain pr 99.3 5.3E-12 1.2E-16 118.9 9.7 91 503-609 2-92 (145)
111 cd08686 C2_ABR C2 domain in th 99.3 7.4E-12 1.6E-16 112.9 9.6 92 505-611 1-101 (118)
112 cd08675 C2B_RasGAP C2 domain s 99.3 1.5E-11 3.3E-16 114.7 11.2 104 505-619 1-122 (137)
113 cd04027 C2B_Munc13 C2 domain s 99.3 2.5E-11 5.3E-16 111.6 12.1 102 504-620 2-115 (127)
114 cd04054 C2A_Rasal1_RasA4 C2 do 99.3 1.7E-11 3.6E-16 111.8 10.5 100 505-618 2-105 (121)
115 cd04049 C2_putative_Elicitor-r 99.3 1.6E-11 3.4E-16 112.2 10.0 91 504-608 2-96 (124)
116 cd08401 C2A_RasA2_RasA3 C2 dom 99.3 1.9E-11 4.2E-16 111.5 10.5 100 505-617 2-104 (121)
117 cd08555 PI-PLCc_GDPD_SF Cataly 99.3 1.9E-11 4E-16 119.2 10.8 98 122-225 2-109 (179)
118 cd08394 C2A_Munc13 C2 domain f 99.3 2E-11 4.4E-16 111.5 9.7 93 504-616 3-100 (127)
119 cd04017 C2D_Ferlin C2 domain f 99.3 4.1E-11 8.8E-16 111.4 11.8 100 504-617 2-117 (135)
120 cd08691 C2_NEDL1-like C2 domai 99.3 2.5E-11 5.3E-16 113.2 10.1 94 504-609 2-107 (137)
121 cd04014 C2_PKC_epsilon C2 doma 99.3 3E-11 6.5E-16 111.7 10.6 109 503-621 4-121 (132)
122 cd04045 C2C_Tricalbin-like C2 99.3 3.3E-11 7.2E-16 109.8 10.5 92 504-609 2-93 (120)
123 cd08690 C2_Freud-1 C2 domain f 99.3 7.4E-11 1.6E-15 112.0 13.1 106 506-617 5-121 (155)
124 cd04044 C2A_Tricalbin-like C2 99.2 3.9E-11 8.4E-16 109.1 10.2 96 503-610 2-97 (124)
125 cd08676 C2A_Munc13-like C2 dom 99.2 5.2E-11 1.1E-15 113.0 11.4 96 501-607 26-143 (153)
126 PF00168 C2: C2 domain; Inter 99.2 4.3E-11 9.3E-16 100.3 7.4 85 505-600 1-85 (85)
127 KOG0696 Serine/threonine prote 99.2 1.9E-11 4E-16 128.5 6.0 96 503-607 180-276 (683)
128 PLN03008 Phospholipase D delta 99.2 1.3E-10 2.8E-15 133.1 11.6 95 528-631 75-172 (868)
129 cd04013 C2_SynGAP_like C2 doma 99.2 1.6E-10 3.4E-15 108.7 10.1 112 502-631 10-134 (146)
130 cd04021 C2_E3_ubiquitin_ligase 99.1 1.8E-10 3.9E-15 105.7 9.4 100 504-619 3-110 (125)
131 cd04047 C2B_Copine C2 domain s 99.1 1.2E-10 2.5E-15 104.1 7.9 99 508-615 5-108 (110)
132 smart00239 C2 Protein kinase C 99.1 1E-09 2.3E-14 94.0 10.0 99 505-614 2-100 (101)
133 cd04052 C2B_Tricalbin-like C2 99.0 1.4E-09 3.1E-14 97.5 8.2 85 525-617 8-96 (111)
134 cd08383 C2A_RasGAP C2 domain ( 99.0 4.2E-09 9.1E-14 94.8 10.8 99 505-620 2-103 (117)
135 KOG1028 Ca2+-dependent phospho 99.0 1.9E-09 4.2E-14 118.3 9.8 104 503-617 167-275 (421)
136 cd08374 C2F_Ferlin C2 domain s 98.9 8.3E-09 1.8E-13 95.5 10.0 97 505-610 2-125 (133)
137 cd08586 PI-PLCc_BcPLC_like Cat 98.9 4.4E-09 9.4E-14 109.6 8.9 139 111-255 6-148 (279)
138 cd08588 PI-PLCc_At5g67130_like 98.8 1.2E-08 2.6E-13 105.7 9.1 139 110-253 7-153 (270)
139 cd00030 C2 C2 domain. The C2 d 98.8 2.8E-08 6E-13 84.4 9.7 90 505-607 1-90 (102)
140 KOG1011 Neurotransmitter relea 98.8 5.6E-09 1.2E-13 114.0 6.4 92 503-608 295-396 (1283)
141 PLN03200 cellulose synthase-in 98.8 1.2E-08 2.7E-13 126.9 10.1 104 502-621 1979-2089(2102)
142 KOG1028 Ca2+-dependent phospho 98.7 4E-08 8.7E-13 108.0 9.3 95 502-605 297-393 (421)
143 PLN02270 phospholipase D alpha 98.7 7.1E-08 1.5E-12 110.9 10.5 120 503-631 8-143 (808)
144 COG5038 Ca2+-dependent lipid-b 98.7 4.5E-08 9.7E-13 114.3 8.3 104 503-619 1040-1146(1227)
145 KOG1328 Synaptic vesicle prote 98.5 4.1E-08 8.8E-13 108.9 2.6 98 503-607 947-1048(1103)
146 PLN02352 phospholipase D epsil 97.9 3.3E-05 7.1E-10 89.1 10.1 112 502-631 9-125 (758)
147 KOG1011 Neurotransmitter relea 97.9 3.3E-05 7.2E-10 85.2 9.4 106 503-616 1125-1236(1283)
148 COG5038 Ca2+-dependent lipid-b 97.9 3.4E-05 7.4E-10 90.9 9.0 93 503-607 436-528 (1227)
149 cd08689 C2_fungal_Pkc1p C2 dom 97.9 1.8E-05 4E-10 69.7 5.1 88 505-608 1-88 (109)
150 KOG2059 Ras GTPase-activating 97.7 9.9E-05 2.2E-09 82.9 8.1 104 503-621 5-113 (800)
151 cd08622 PI-PLCXDc_CG14945_like 97.5 0.00066 1.4E-08 70.8 11.2 137 112-254 6-159 (276)
152 KOG1013 Synaptic vesicle prote 97.4 0.00026 5.7E-09 73.5 6.1 104 505-623 235-340 (362)
153 KOG1031 Predicted Ca2+-depende 97.4 0.00026 5.6E-09 77.6 5.9 103 503-618 3-121 (1169)
154 KOG2059 Ras GTPase-activating 97.3 0.00076 1.7E-08 76.0 9.2 77 528-607 149-240 (800)
155 KOG0905 Phosphoinositide 3-kin 97.3 0.00022 4.7E-09 83.8 4.8 96 503-607 1524-1622(1639)
156 cd08587 PI-PLCXDc_like Catalyt 97.2 0.0023 5E-08 67.2 11.3 137 112-253 6-170 (288)
157 KOG1328 Synaptic vesicle prote 97.0 0.00019 4.1E-09 80.6 -0.1 59 550-608 179-272 (1103)
158 cd08556 GDPD Glycerophosphodie 97.0 0.0025 5.3E-08 61.8 7.8 64 132-210 9-72 (189)
159 cd08582 GDPD_like_2 Glyceropho 96.9 0.0039 8.5E-08 63.2 9.0 40 134-175 11-50 (233)
160 cd08683 C2_C2cd3 C2 domain fou 96.9 0.0026 5.6E-08 58.1 6.5 73 530-606 33-130 (143)
161 cd08562 GDPD_EcUgpQ_like Glyce 96.9 0.0029 6.2E-08 63.8 7.7 40 134-175 11-50 (229)
162 cd08616 PI-PLCXD1c Catalytic d 96.7 0.015 3.1E-07 61.3 11.9 135 112-254 7-174 (290)
163 cd08563 GDPD_TtGDE_like Glycer 96.7 0.0046 9.9E-08 62.6 7.8 41 133-175 12-52 (230)
164 cd08579 GDPD_memb_like Glycero 96.7 0.0044 9.5E-08 62.3 7.4 41 133-175 10-50 (220)
165 PF03009 GDPD: Glycerophosphor 96.6 0.0024 5.1E-08 64.5 4.8 42 133-176 7-48 (256)
166 cd08380 C2_PI3K_like C2 domain 96.5 0.015 3.3E-07 55.3 9.3 105 504-617 9-122 (156)
167 cd08398 C2_PI3K_class_I_alpha 96.5 0.017 3.6E-07 55.3 9.4 104 504-618 9-122 (158)
168 KOG1326 Membrane-associated pr 96.5 0.0021 4.7E-08 74.9 3.8 94 500-605 610-703 (1105)
169 cd08693 C2_PI3K_class_I_beta_d 96.5 0.017 3.7E-07 56.2 9.5 105 504-617 9-135 (173)
170 KOG1013 Synaptic vesicle prote 96.4 0.00076 1.7E-08 70.1 0.1 99 503-610 93-194 (362)
171 cd08397 C2_PI3K_class_III C2 d 96.3 0.014 3.1E-07 55.9 8.1 85 530-616 30-121 (159)
172 PLN02964 phosphatidylserine de 96.3 0.0079 1.7E-07 69.3 7.0 100 502-621 53-157 (644)
173 cd08567 GDPD_SpGDE_like Glycer 96.3 0.015 3.2E-07 59.9 8.4 40 135-176 14-53 (263)
174 cd08566 GDPD_AtGDE_like Glycer 96.0 0.021 4.5E-07 58.3 8.0 39 135-175 14-52 (240)
175 cd08565 GDPD_pAtGDE_like Glyce 96.0 0.032 6.9E-07 56.8 9.0 40 134-175 11-50 (235)
176 cd08577 PI-PLCc_GDPD_SF_unchar 95.7 0.028 6E-07 57.1 7.4 97 122-230 4-109 (228)
177 cd08568 GDPD_TmGDE_like Glycer 95.7 0.04 8.6E-07 55.6 8.4 79 133-222 11-114 (226)
178 cd08573 GDPD_GDE1 Glycerophosp 95.7 0.038 8.3E-07 57.1 8.4 40 134-175 11-50 (258)
179 cd08564 GDPD_GsGDE_like Glycer 95.7 0.037 8E-07 57.3 8.2 39 134-174 18-56 (265)
180 cd04012 C2A_PI3K_class_II C2 d 95.6 0.058 1.2E-06 52.3 8.7 113 503-623 8-141 (171)
181 cd08399 C2_PI3K_class_I_gamma 95.6 0.078 1.7E-06 51.7 9.4 105 504-617 11-137 (178)
182 cd05029 S-100A6 S-100A6: S-100 95.4 0.076 1.6E-06 45.7 7.7 63 22-95 11-79 (88)
183 cd08619 PI-PLCXDc_plant Cataly 95.3 0.084 1.8E-06 55.0 9.0 137 109-256 23-166 (285)
184 cd08583 PI-PLCc_GDPD_SF_unchar 95.1 0.11 2.3E-06 52.9 9.2 39 135-175 14-52 (237)
185 PF00792 PI3K_C2: Phosphoinosi 95.0 0.045 9.8E-07 51.3 5.9 68 551-619 23-102 (142)
186 cd08575 GDPD_GDE4_like Glycero 94.9 0.029 6.4E-07 58.1 4.6 41 134-176 13-53 (264)
187 cd08561 GDPD_cytoplasmic_ScUgp 94.8 0.034 7.4E-07 56.9 4.6 41 134-176 11-51 (249)
188 cd08620 PI-PLCXDc_like_1 Catal 94.7 0.23 5.1E-06 51.9 10.7 142 112-255 6-162 (281)
189 cd08684 C2A_Tac2-N C2 domain f 94.6 0.052 1.1E-06 46.5 4.5 57 549-608 36-94 (103)
190 cd08574 GDPD_GDE_2_3_6 Glycero 94.4 0.037 8.1E-07 57.0 3.9 41 134-176 14-54 (252)
191 cd08584 PI-PLCc_GDPD_SF_unchar 94.3 0.16 3.5E-06 50.0 7.9 47 138-189 8-54 (192)
192 PRK11143 glpQ glycerophosphodi 94.3 0.049 1.1E-06 59.0 4.6 53 122-176 23-79 (355)
193 cd08601 GDPD_SaGlpQ_like Glyce 94.0 0.053 1.2E-06 55.8 4.2 41 134-176 13-53 (256)
194 cd08580 GDPD_Rv2277c_like Glyc 94.0 0.064 1.4E-06 55.7 4.6 42 133-176 12-53 (263)
195 cd08581 GDPD_like_1 Glyceropho 94.0 0.053 1.2E-06 55.0 4.0 41 134-176 11-51 (229)
196 cd08612 GDPD_GDE4 Glycerophosp 93.9 0.059 1.3E-06 57.0 4.3 41 134-176 39-79 (300)
197 cd08600 GDPD_EcGlpQ_like Glyce 93.9 0.06 1.3E-06 57.5 4.3 42 133-176 12-53 (318)
198 cd08607 GDPD_GDE5 Glycerophosp 93.9 0.063 1.4E-06 56.3 4.3 49 127-177 12-60 (290)
199 cd08605 GDPD_GDE5_like_1_plant 93.4 0.071 1.5E-06 55.7 3.8 38 136-175 25-62 (282)
200 cd08571 GDPD_SHV3_plant Glycer 93.4 0.073 1.6E-06 56.4 3.8 41 134-176 13-53 (302)
201 cd08609 GDPD_GDE3 Glycerophosp 93.3 0.08 1.7E-06 56.4 4.0 42 133-176 38-79 (315)
202 cd08559 GDPD_periplasmic_GlpQ_ 93.2 0.076 1.7E-06 56.0 3.7 42 133-176 12-53 (296)
203 cd08606 GDPD_YPL110cp_fungi Gl 93.1 0.081 1.7E-06 55.4 3.6 39 136-176 24-62 (286)
204 cd08570 GDPD_YPL206cp_fungi Gl 93.1 0.12 2.5E-06 52.6 4.6 42 133-176 10-51 (234)
205 PRK09454 ugpQ cytoplasmic glyc 92.7 0.095 2.1E-06 53.8 3.4 42 133-176 19-60 (249)
206 cd08602 GDPD_ScGlpQ1_like Glyc 92.6 0.11 2.4E-06 55.2 3.9 42 133-176 12-53 (309)
207 cd05030 calgranulins Calgranul 92.0 0.57 1.2E-05 40.1 6.8 63 22-95 9-79 (88)
208 cd05026 S-100Z S-100Z: S-100Z 91.4 1.1 2.3E-05 38.9 8.0 65 21-95 10-81 (93)
209 cd08572 GDPD_GDE5_like Glycero 91.3 0.2 4.4E-06 52.7 4.1 42 133-176 19-60 (293)
210 cd08604 GDPD_SHV3_repeat_2 Gly 91.3 0.25 5.4E-06 52.3 4.7 42 133-176 12-53 (300)
211 cd05022 S-100A13 S-100A13: S-1 91.0 0.86 1.9E-05 39.3 7.0 64 21-95 8-75 (89)
212 cd05023 S-100A11 S-100A11: S-1 90.9 1 2.3E-05 38.7 7.3 64 22-95 10-80 (89)
213 cd08610 GDPD_GDE6 Glycerophosp 90.7 0.3 6.5E-06 52.1 4.7 42 133-176 34-75 (316)
214 KOG2060 Rab3 effector RIM1 and 90.6 0.15 3.2E-06 54.4 2.2 108 502-617 268-379 (405)
215 PF13833 EF-hand_8: EF-hand do 90.5 0.61 1.3E-05 35.6 5.1 50 34-94 3-52 (54)
216 cd05024 S-100A10 S-100A10: A s 89.5 2 4.3E-05 37.2 7.8 64 22-95 9-76 (91)
217 cd08585 GDPD_like_3 Glyceropho 88.8 0.36 7.9E-06 49.2 3.4 39 135-176 20-58 (237)
218 COG0584 UgpQ Glycerophosphoryl 88.6 0.47 1E-05 48.6 4.0 38 135-174 19-56 (257)
219 cd08613 GDPD_GDE4_like_1 Glyce 88.3 0.42 9.1E-06 50.6 3.5 39 136-176 60-98 (309)
220 cd08560 GDPD_EcGlpQ_like_1 Gly 88.2 0.47 1E-05 51.4 3.9 41 133-175 28-69 (356)
221 cd08608 GDPD_GDE2 Glycerophosp 88.2 0.48 1E-05 51.3 4.0 42 133-176 13-54 (351)
222 KOG2258 Glycerophosphoryl dies 88.1 0.63 1.4E-05 50.2 4.8 41 134-176 81-121 (341)
223 cd05025 S-100A1 S-100A1: S-100 87.8 2.1 4.5E-05 36.8 7.0 65 21-95 9-80 (92)
224 cd08578 GDPD_NUC-2_fungi Putat 87.7 0.61 1.3E-05 49.4 4.3 39 137-177 16-54 (300)
225 cd08695 C2_Dock-B C2 domains f 87.7 1.1 2.5E-05 44.0 5.8 39 549-587 54-94 (189)
226 PTZ00268 glycosylphosphatidyli 87.2 6.5 0.00014 42.8 11.7 108 142-257 90-207 (380)
227 KOG3837 Uncharacterized conser 87.0 0.5 1.1E-05 51.0 3.1 108 504-619 368-489 (523)
228 smart00027 EH Eps15 homology d 86.2 3.6 7.8E-05 35.5 7.7 61 21-95 10-72 (96)
229 cd00051 EFh EF-hand, calcium b 86.2 3.9 8.5E-05 30.5 7.2 59 23-93 2-62 (63)
230 cd08694 C2_Dock-A C2 domains f 86.0 4.3 9.3E-05 40.2 8.8 71 549-619 54-134 (196)
231 KOG1326 Membrane-associated pr 85.3 0.54 1.2E-05 55.7 2.5 84 526-617 223-317 (1105)
232 PF14429 DOCK-C2: C2 domain in 85.0 4.7 0.0001 39.4 8.7 67 549-616 60-135 (184)
233 smart00142 PI3K_C2 Phosphoinos 84.9 3.4 7.4E-05 36.2 6.9 57 530-587 32-91 (100)
234 PTZ00183 centrin; Provisional 84.9 4.4 9.4E-05 37.6 8.2 65 19-95 88-154 (158)
235 PF13499 EF-hand_7: EF-hand do 84.4 1 2.2E-05 35.7 3.1 61 23-93 2-66 (66)
236 KOG1327 Copine [Signal transdu 84.2 1.4 3E-05 49.6 5.0 95 524-620 151-250 (529)
237 PTZ00184 calmodulin; Provision 83.8 4.9 0.00011 36.6 7.9 65 19-95 82-148 (149)
238 cd05027 S-100B S-100B: S-100B 83.7 5.7 0.00012 34.0 7.6 65 21-95 8-79 (88)
239 cd08679 C2_DOCK180_related C2 83.1 2.4 5.2E-05 41.3 5.7 68 550-619 55-134 (178)
240 cd08603 GDPD_SHV3_repeat_1 Gly 81.9 1.4 3E-05 46.6 3.7 41 134-176 13-55 (299)
241 PF05386 TEP1_N: TEP1 N-termin 80.4 0.38 8.2E-06 32.2 -0.7 14 195-208 8-21 (30)
242 PF09069 EF-hand_3: EF-hand; 80.3 3.7 8.1E-05 35.5 5.2 62 23-96 5-76 (90)
243 cd00052 EH Eps15 homology doma 79.5 9.8 0.00021 29.7 7.2 57 24-94 2-60 (67)
244 PF01023 S_100: S-100/ICaBP ty 79.5 2.4 5.2E-05 31.6 3.2 27 22-48 7-37 (44)
245 cd05031 S-100A10_like S-100A10 79.3 8.8 0.00019 33.0 7.3 65 21-95 8-79 (94)
246 cd00213 S-100 S-100: S-100 dom 78.1 11 0.00024 31.7 7.5 66 20-95 7-79 (88)
247 KOG1327 Copine [Signal transdu 77.5 2.8 6E-05 47.3 4.5 71 549-619 42-116 (529)
248 KOG4306 Glycosylphosphatidylin 75.1 12 0.00026 39.5 8.0 82 144-231 74-162 (306)
249 PF05517 p25-alpha: p25-alpha 70.8 9.3 0.0002 36.4 5.7 63 23-95 1-69 (154)
250 cd08621 PI-PLCXDc_like_2 Catal 66.4 14 0.00031 39.1 6.6 92 112-205 6-113 (300)
251 PTZ00183 centrin; Provisional 64.6 29 0.00062 32.0 7.7 63 21-95 17-81 (158)
252 PF00036 EF-hand_1: EF hand; 62.7 9.1 0.0002 25.7 2.8 26 22-47 1-28 (29)
253 PF13405 EF-hand_6: EF-hand do 62.4 8.3 0.00018 25.9 2.6 26 22-47 1-28 (31)
254 PTZ00184 calmodulin; Provision 60.4 43 0.00094 30.2 8.0 63 21-95 11-75 (149)
255 KOG0027 Calmodulin and related 59.5 37 0.0008 31.7 7.4 64 20-95 84-149 (151)
256 KOG0904 Phosphatidylinositol 3 58.5 52 0.0011 39.4 9.5 105 504-617 344-471 (1076)
257 PF12416 DUF3668: Cep120 prote 57.7 55 0.0012 35.4 9.1 100 505-620 2-116 (340)
258 cd08697 C2_Dock-D C2 domains f 57.1 32 0.00069 33.9 6.6 67 549-616 57-138 (185)
259 PF15627 CEP76-C2: CEP76 C2 do 56.7 92 0.002 29.8 9.4 111 501-621 7-135 (156)
260 KOG1329 Phospholipase D1 [Lipi 56.2 12 0.00026 44.6 4.1 94 530-631 138-235 (887)
261 smart00054 EFh EF-hand, calciu 49.9 22 0.00048 21.6 3.0 26 22-47 1-28 (29)
262 cd08696 C2_Dock-C C2 domains f 49.5 33 0.00072 33.6 5.4 55 549-604 55-117 (179)
263 KOG0906 Phosphatidylinositol 3 49.4 18 0.0004 41.6 4.0 54 562-616 78-138 (843)
264 COG5126 FRQ1 Ca2+-binding prot 47.8 66 0.0014 30.9 7.0 66 18-95 89-156 (160)
265 PF11422 IBP39: Initiator bind 47.2 37 0.00081 33.0 5.1 100 20-128 18-139 (181)
266 KOG0027 Calmodulin and related 47.2 79 0.0017 29.5 7.5 66 21-98 8-75 (151)
267 cd08576 GDPD_like_SMaseD_PLD G 46.3 35 0.00077 35.5 5.3 58 127-191 1-67 (265)
268 PF14788 EF-hand_10: EF hand; 45.9 45 0.00097 25.8 4.4 46 36-93 2-47 (51)
269 COG5126 FRQ1 Ca2+-binding prot 45.3 90 0.0019 30.0 7.5 61 22-95 21-83 (160)
270 PF14186 Aida_C2: Cytoskeletal 44.6 39 0.00085 32.0 4.8 105 503-616 13-122 (147)
271 PRK07259 dihydroorotate dehydr 40.5 73 0.0016 33.5 6.8 79 130-222 95-180 (301)
272 KOG1452 Predicted Rho GTPase-a 38.4 1.2E+02 0.0027 32.2 7.7 73 503-587 51-123 (442)
273 PF10358 NT-C2: N-terminal C2 38.1 1.9E+02 0.0042 26.3 8.5 101 503-618 7-121 (143)
274 cd00252 SPARC_EC SPARC_EC; ext 36.2 1.7E+02 0.0038 26.4 7.5 61 19-95 46-108 (116)
275 cd08687 C2_PKN-like C2 domain 35.7 66 0.0014 28.1 4.4 47 559-611 31-77 (98)
276 PF15625 CC2D2AN-C2: CC2D2A N- 35.3 76 0.0016 30.5 5.4 68 531-608 38-108 (168)
277 PF08726 EFhand_Ca_insen: Ca2+ 33.1 25 0.00055 28.9 1.5 32 18-49 3-35 (69)
278 PF13202 EF-hand_5: EF hand; P 32.3 47 0.001 21.3 2.4 23 23-45 1-25 (25)
279 PTZ00466 actin-like protein; P 30.9 55 0.0012 35.8 4.1 47 181-227 85-136 (380)
280 PF12738 PTCB-BRCT: twin BRCT 30.8 35 0.00075 26.7 1.9 30 122-155 32-61 (63)
281 PTZ00452 actin; Provisional 29.1 60 0.0013 35.4 4.0 48 182-229 79-133 (375)
282 PF11478 Tachystatin_B: Antimi 27.8 21 0.00045 25.1 0.1 16 142-160 1-16 (42)
283 PLN02964 phosphatidylserine de 27.8 1.7E+02 0.0036 34.5 7.4 61 23-95 181-243 (644)
284 PRK05395 3-dehydroquinate dehy 27.5 57 0.0012 30.8 3.0 67 133-210 22-103 (146)
285 cd02810 DHOD_DHPD_FMN Dihydroo 27.4 2.2E+02 0.0047 29.6 7.7 90 129-230 101-195 (289)
286 PTZ00281 actin; Provisional 27.4 63 0.0014 35.2 3.8 47 181-227 79-131 (376)
287 PF00977 His_biosynth: Histidi 26.9 86 0.0019 31.7 4.4 39 150-193 123-161 (229)
288 KOG0034 Ca2+/calmodulin-depend 26.0 2E+02 0.0043 28.4 6.6 69 21-95 104-175 (187)
289 KOG2421 Predicted starch-bindi 26.0 16 0.00035 40.6 -1.1 61 109-174 309-382 (417)
290 PRK08136 glycosyl transferase 25.2 67 0.0014 34.4 3.4 26 164-189 108-134 (317)
291 PF00022 Actin: Actin; InterP 24.9 75 0.0016 34.4 3.9 46 182-227 73-124 (393)
292 cd00466 DHQase_II Dehydroquina 24.7 65 0.0014 30.2 2.8 67 133-210 20-101 (140)
293 smart00268 ACTIN Actin. ACTIN 24.1 81 0.0018 34.0 3.9 46 182-227 74-125 (373)
294 KOG0034 Ca2+/calmodulin-depend 22.9 3.2E+02 0.0069 27.0 7.4 61 20-95 29-95 (187)
295 PTZ00004 actin-2; Provisional 22.7 1E+02 0.0022 33.6 4.3 46 182-227 80-131 (378)
296 KOG0031 Myosin regulatory ligh 22.6 3.5E+02 0.0076 26.0 7.1 61 22-94 102-164 (171)
297 PF05673 DUF815: Protein of un 22.5 2.1E+02 0.0045 29.6 6.1 85 122-230 51-137 (249)
298 PF11618 DUF3250: Protein of u 21.6 1E+02 0.0023 27.5 3.4 72 549-623 12-95 (107)
299 PF13833 EF-hand_8: EF-hand do 21.4 1.3E+02 0.0028 22.4 3.5 30 18-47 22-53 (54)
300 KOG0044 Ca2+ sensor (EF-Hand s 20.8 4.3E+02 0.0094 26.2 7.8 64 19-93 24-90 (193)
301 PF07942 N2227: N2227-like pro 20.4 82 0.0018 32.9 2.8 64 112-194 167-236 (270)
302 PRK09071 hypothetical protein; 20.3 74 0.0016 34.1 2.6 58 132-189 51-132 (323)
303 PRK07394 hypothetical protein; 20.2 77 0.0017 34.3 2.7 103 39-189 3-139 (342)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=6.3e-163 Score=1341.84 Aligned_cols=579 Identities=51% Similarity=0.876 Sum_probs=482.6
Q ss_pred CcceeeeeeccCCCCCCCChhHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHhcccccCCCCCCc
Q 042071 1 SYRVCFCFRRWFHVGVSEPPEAIESLFNQYSEN-GIMTVDHLHRFLVEVQKER-NPKKEDAQAIIDSMDDQLNLKHPHSS 78 (632)
Q Consensus 1 ~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~lt~~~~~~FL~~~Q~e~-~~~~~~~~~li~~~~~~~~~~~~~~~ 78 (632)
+|+||+||.|+|+.+++.||+||.+||.+|+++ +.||.++|.+||+++|++. ..+.++|+.||++|+.. .++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 85 (598)
T PLN02230 9 SYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRR---KHHIAK 85 (598)
T ss_pred cceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhh---cccccc
Confidence 699999999999999999999999999999866 8999999999999999654 46789999999998742 121222
Q ss_pred ccCCCCCHHHHHHHHCCC-CCCCCCCCCCccCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEee
Q 042071 79 DQRKGLNLEAFFKYLLSE-KNSPLCPSRGVHQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDL 157 (632)
Q Consensus 79 ~~~~~l~~~~F~~~L~s~-~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDc 157 (632)
..++.|+++||++||+|. .|.+. +..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 86 ~~~~~~~~~~F~~yL~s~~~~~~~--~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~ 163 (598)
T PLN02230 86 FTRRNLTLDDFNYYLFSTDLNPPI--ADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDL 163 (598)
T ss_pred ccccccCHHHHHHHHcCcccCCcc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEec
Confidence 345679999999999995 44454 567999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCC
Q 042071 158 WPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECL 237 (632)
Q Consensus 158 WdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~ 237 (632)
|||+ +++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++ .+..
T Consensus 164 wdg~--~~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~-~~~~ 240 (598)
T PLN02230 164 WPRG--TDDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHD-SEGC 240 (598)
T ss_pred cCCC--CCCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCC-Cccc
Confidence 9998 789999999999999999999999999999999999999999999999999999999999999999977 4456
Q ss_pred CCCCChhhccCcEEEecCCCCCcccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccC
Q 042071 238 KEFPSPESLKGKIIISTKPPEDKAKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWG 317 (632)
Q Consensus 238 ~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (632)
..||||++||||||||+|+++..++..+... .. ....+ ..+++..|+
T Consensus 241 ~~lpsP~~Lk~kilik~Kk~~~~~e~~~~~~--------------------~~--~~~~~-----------~~~~~~~~~ 287 (598)
T PLN02230 241 QEFPSPEELKEKILISTKPPKEYLEANDAKE--------------------KD--NGEKG-----------KDSDEDVWG 287 (598)
T ss_pred CCCCChHHHcCCEEEEecCCccccccccccc--------------------cc--ccccc-----------cccchhhhc
Confidence 7899999999999999999876554321000 00 00000 011222233
Q ss_pred CCCCCccccccccCCCCCCCCCCcccCCCC-CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeec
Q 042071 318 EEVPNLKGIVKTTNGSTNDKDYSDEEGSTN-ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSL 396 (632)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~ 396 (632)
.+.+++...........+..+..... .+. .+....+....+ +++|++|++|+++++++++..+++..+.+++++||
T Consensus 288 ~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~Sl 364 (598)
T PLN02230 288 KEPEDLISTQSDLDKVTSSVNDLNQD-DEERGSCESDTSCQLQ--APEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSL 364 (598)
T ss_pred cccccccccccccccccccccccccc-hhccccccccccchhc--CHHHhhheeeecCccCCCcchhhhcCccceeeccc
Confidence 33222211110000000000000000 000 000001112223 89999999999999999999888877778899999
Q ss_pred cHHHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccccCcccee
Q 042071 397 SELQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGCGYV 476 (632)
Q Consensus 397 sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYV 476 (632)
||.++.+++ +.++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.||+||||
T Consensus 365 sE~~~~~~~-~~~~~~~v~~nk~~L~RIYPkG~RvdSSNynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYV 443 (598)
T PLN02230 365 SEQLLEKAV-ASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYV 443 (598)
T ss_pred cHHHHHHHH-HhhhHHHHHhhhhhceeeCCCCCcCCCCCCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCce
Confidence 999999999 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccccccCCcccccCCCCCCCcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCC
Q 042071 477 KKPEFLLEKTGLYRDLFDSEVNLPVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIK 556 (632)
Q Consensus 477 LKP~~lr~~~~~~~~~~dp~~~~p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~ 556 (632)
|||++|| +..+....|+|....+++.+|+|+|++|++|+.++++...+.++++||||+|+|.|.|.|+. +++|+++.
T Consensus 444 LKP~~Lr-~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~--~~kT~v~~ 520 (598)
T PLN02230 444 KKPDFLM-DAGPNGQDFYPKDNSCPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEV--MEKTKIEY 520 (598)
T ss_pred ECCHHhc-CCCccccccCCCcCCCcCcEEEEEEEEccCccCCCccccCCCCCCCCceEEEEEEECCCCCc--ccceeccC
Confidence 9999999 65554567999877767788999999999998766655567788899999999999999998 88999888
Q ss_pred CCCCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCccc
Q 042071 557 DSWVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKREA 628 (632)
Q Consensus 557 nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~~~ 628 (632)
|++||+|||+|+|.+..||||+|||.|+|+| ..++++|+||+||||++|++|||||||+|+.|+++.+++.
T Consensus 521 n~~nP~Wneef~F~l~vPELAllRf~V~d~d-~~~~ddfiGQ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~L 591 (598)
T PLN02230 521 DTWTPIWNKEFIFPLAVPELALLRVEVHEHD-INEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRL 591 (598)
T ss_pred CCCCCccCCeeEEEEEcCceeEEEEEEEECC-CCCCCCEEEEEEcchHHhhCccceEeccCCCcCCCCCCee
Confidence 8899999999999999999999999999998 6678999999999999999999999999999999988753
No 2
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=9.4e-162 Score=1331.12 Aligned_cols=570 Identities=60% Similarity=1.070 Sum_probs=480.7
Q ss_pred CcceeeeeeccCCCCCCCChhHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCccc
Q 042071 1 SYRVCFCFRRWFHVGVSEPPEAIESLFNQYSENGIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQ 80 (632)
Q Consensus 1 ~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~ 80 (632)
+||||+||.|+|+.++..+|+||..||.+|++++.||.++|.+||+++|++..++.++|.+||++|+.. ..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~---------~~ 75 (581)
T PLN02222 5 TYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL---------LH 75 (581)
T ss_pred ceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh---------hh
Confidence 599999999999999999999999999999877899999999999999999888899999999998621 12
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCccCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCC
Q 042071 81 RKGLNLEAFFKYLLSEKNSPLCPSRGVHQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPS 160 (632)
Q Consensus 81 ~~~l~~~~F~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG 160 (632)
++.|+++||++||+|++|.++. +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~-~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCc-cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 4679999999999999999985 467999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCC
Q 042071 161 SKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEF 240 (632)
Q Consensus 161 ~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~l 240 (632)
+ ++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||+++..+....|
T Consensus 155 ~-~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~l 233 (581)
T PLN02222 155 S-DKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEF 233 (581)
T ss_pred C-CCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCC
Confidence 8 233478999999999999999999999999999999999999999999999999999999999999998855556789
Q ss_pred CChhhccCcEEEecCCCCCcccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCC
Q 042071 241 PSPESLKGKIIISTKPPEDKAKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEV 320 (632)
Q Consensus 241 PSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (632)
|||++||||||||+|++++.++..++... ..++ ..+++..|+...
T Consensus 234 psP~~Lk~kilik~K~~~~~~~~~~~~~~-------------------------~~~~----------~~~~~~~~~~~~ 278 (581)
T PLN02222 234 PSPNSLKKRIIISTKPPKEYKEGKDDEVV-------------------------QKGK----------DLGDEEVWGREV 278 (581)
T ss_pred CChHHHCCCEEEEecCCcccccccccccc-------------------------cccc----------cccccccccccc
Confidence 99999999999999998755433211000 0000 001111223222
Q ss_pred CCccccccccCCCCCCCCCCcccCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHH
Q 042071 321 PNLKGIVKTTNGSTNDKDYSDEEGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQ 400 (632)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~ 400 (632)
+++.......+......+.. .+.+....+..... ++++++|++++.+++++++...++..+..++++||||++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~ 351 (581)
T PLN02222 279 PSFIQRNKSVDKNDSNGDDD-----DDDDDGEDKSKKNA--PPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQ 351 (581)
T ss_pred cccccccccccccccccccc-----cccccccccccccc--CHHhhhheeeecccccCccchhhhcCcccccccccCHHH
Confidence 22211111000000000000 00001111112223 688999999999998888777666666677899999999
Q ss_pred HHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccccCccceeecCc
Q 042071 401 LERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGCGYVKKPE 480 (632)
Q Consensus 401 ~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~ 480 (632)
+.+++ ++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.||+|||||||+
T Consensus 352 ~~~~~-~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~ 430 (581)
T PLN02222 352 LEKAA-EKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPD 430 (581)
T ss_pred HHHHH-HhhhHHHHHHhhhhceeeCCCCCcCcCCCCCchhHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCH
Confidence 99999 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcccccCCCCCCCcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCC
Q 042071 481 FLLEKTGLYRDLFDSEVNLPVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWV 560 (632)
Q Consensus 481 ~lr~~~~~~~~~~dp~~~~p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~n 560 (632)
+|| +.......|||....+++.+|+|+|++|++|+++..+...+.++++||||+|+|.|.|.|+. ++||+++.+|+|
T Consensus 431 ~lr-~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~--~~rTk~v~nn~n 507 (581)
T PLN02222 431 LLL-KSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTV--MKKTKTLEDNWI 507 (581)
T ss_pred Hhc-cCCccccccCCCCCCCccceEEEEEEEcccccCCCCccccCCCCCCCeeEEEEEeccCCCcc--eeeeEecCCCCC
Confidence 999 55443457999888887888999999999987655555566678899999999999999998 889999999999
Q ss_pred CccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCccc
Q 042071 561 PAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKREA 628 (632)
Q Consensus 561 P~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~~~ 628 (632)
|+|||+|+|.+..||+|+|||.|+|+| ..+.++|+||+++||++|++|||||||+|..|+++.+++.
T Consensus 508 P~W~e~f~F~i~~PeLAllRf~V~d~D-~~~~ddfigq~~lPv~~Lr~GyR~V~L~~~~g~~l~~a~L 574 (581)
T PLN02222 508 PAWDEVFEFPLTVPELALLRLEVHEYD-MSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKL 574 (581)
T ss_pred cccCCeeEEEEEcCceeEEEEEEEECC-CCCCCcEEEEEEcchhhhhCccceEEccCCCcCCCCCeeE
Confidence 999999999999999999999999998 6677999999999999999999999999999999988753
No 3
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=2.9e-158 Score=1300.30 Aligned_cols=549 Identities=52% Similarity=0.900 Sum_probs=469.6
Q ss_pred CcceeeeeeccCCCCCCCChhHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCccc
Q 042071 1 SYRVCFCFRRWFHVGVSEPPEAIESLFNQYSENGIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQ 80 (632)
Q Consensus 1 ~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~ 80 (632)
+|+||+||.|+|+.++..||+||..||.+|++++.||.++|.+||+++|++...+.+.|++||++|++....+ .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~------~ 77 (567)
T PLN02228 4 SFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFH------H 77 (567)
T ss_pred cceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhc------c
Confidence 6999999999999999999999999999999878999999999999999998788899999999998633221 2
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCccCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCC
Q 042071 81 RKGLNLEAFFKYLLSEKNSPLCPSRGVHQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPS 160 (632)
Q Consensus 81 ~~~l~~~~F~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG 160 (632)
++.|+++||++||+|.+|++++++..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||
T Consensus 78 ~~~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg 157 (567)
T PLN02228 78 HGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPN 157 (567)
T ss_pred cCccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 35799999999999999999876678999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCC
Q 042071 161 SKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEF 240 (632)
Q Consensus 161 ~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~l 240 (632)
+ ++++||||||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||++||||+||.++ .+....|
T Consensus 158 ~-~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~-~~~~~~l 235 (567)
T PLN02228 158 P-SGNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCT-SESTKHF 235 (567)
T ss_pred C-CCCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCC-CCccCCC
Confidence 8 3345999999999999999999999999999999999999999999999999999999999999999877 4456789
Q ss_pred CChhhccCcEEEecCCCCCcccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCC
Q 042071 241 PSPESLKGKIIISTKPPEDKAKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEV 320 (632)
Q Consensus 241 PSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (632)
|||++||||||||+|+++...+..... +. .++++++..|...
T Consensus 236 psP~~Lk~kilik~Kk~~~~~~~~~~~-----------------------------~~--------~~~~~~~~~~~~~- 277 (567)
T PLN02228 236 PSPEELKNKILISTKPPKEYLESKTVQ-----------------------------TT--------RTPTVKETSWKRV- 277 (567)
T ss_pred CChHHHCCCEEEEecCCcccccccccc-----------------------------cc--------ccccccccccccc-
Confidence 999999999999999975433221000 00 0000011111100
Q ss_pred CCccccccccCCCCCCCCCCcccCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHH
Q 042071 321 PNLKGIVKTTNGSTNDKDYSDEEGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQ 400 (632)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~ 400 (632)
.+.. +. ...+ .+..... +++|++|++++..+.++++.......+...+++||||++
T Consensus 278 ~~~~-------------~~-------~~~~--~~~~~~~--~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~ 333 (567)
T PLN02228 278 ADAE-------------NK-------ILEE--YKDEESE--AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQW 333 (567)
T ss_pred ccch-------------hh-------cccc--ccccchh--hhhhhhheeeeccccccCcchhhccCcccceeeccCHHH
Confidence 0000 00 0000 0001112 678999999988777766665544445556789999999
Q ss_pred HHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccccCccceeecCc
Q 042071 401 LERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGCGYVKKPE 480 (632)
Q Consensus 401 ~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~ 480 (632)
+.+++ +.++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++||+|||||||+
T Consensus 334 ~~~~~-~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~ 412 (567)
T PLN02228 334 LETMV-RTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPR 412 (567)
T ss_pred HHHHH-HhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHhcCccEEeeecccCCChHHHhhcCchhhCCCCCceeCch
Confidence 99999 88899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcccccCCCCCCCcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCC
Q 042071 481 FLLEKTGLYRDLFDSEVNLPVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWV 560 (632)
Q Consensus 481 ~lr~~~~~~~~~~dp~~~~p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~n 560 (632)
+|| +. ...|+|....|++.+|+|+||+|++|+.++.....+.++++||||+|+|.|.|.|.. ++||++++||+|
T Consensus 413 ~Lr-~~---~~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~--~~rTk~~~n~~n 486 (567)
T PLN02228 413 ILL-DE---HTLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTV--SYRTETAVDQWF 486 (567)
T ss_pred hhc-cc---ccccCCccCCCcCceEEEEEEECCccCCCCCCCCCCCCCCCCcEEEEEEEecCCCCC--cceeeccCCCCC
Confidence 999 43 357899877777778999999999986544444445667899999999999999988 889999999999
Q ss_pred Ccc-CcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCcc
Q 042071 561 PAW-NKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKRE 627 (632)
Q Consensus 561 P~W-NEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~~ 627 (632)
|+| ||+|+|.+..||+|+|||.|+|+| ..+.++|+||+++||++|++|||||||+|..|+++.+++
T Consensus 487 P~W~~e~f~F~~~~pELA~lRf~V~D~d-~~~~d~figq~~lPv~~Lr~GYR~VpL~~~~G~~l~~at 553 (567)
T PLN02228 487 PIWGNDEFLFQLRVPELALLWFKVQDYD-NDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTR 553 (567)
T ss_pred ceECCCeEEEEEEcCceeEEEEEEEeCC-CCCCCCEEEEEEcchhHhhCCeeEEEccCCCCCCCCCeE
Confidence 999 999999999999999999999998 667899999999999999999999999999999998875
No 4
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=1.3e-156 Score=1294.01 Aligned_cols=572 Identities=55% Similarity=0.966 Sum_probs=475.2
Q ss_pred CcceeeeeeccCCCCCCCChhHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcc
Q 042071 1 SYRVCFCFRRWFHVGVSEPPEAIESLFNQYSEN-GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSD 79 (632)
Q Consensus 1 ~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~ 79 (632)
+|++|.||+|.++.+++++|+||..||.+|+++ +.||.++|.+||+++|+|...+.++|++||++|.. .+.....+
T Consensus 18 ~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~---~~~~~~~~ 94 (599)
T PLN02952 18 NYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVIN---RRHHVTRY 94 (599)
T ss_pred CHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHh---hccccccc
Confidence 599999999999999999999999999999876 89999999999999999988899999999988752 11111223
Q ss_pred cCCCCCHHHHHHHHCC-CCCCCCCCCCCccCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeec
Q 042071 80 QRKGLNLEAFFKYLLS-EKNSPLCPSRGVHQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLW 158 (632)
Q Consensus 80 ~~~~l~~~~F~~~L~s-~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcW 158 (632)
.+..|+++||++||+| +.|.|. +..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||
T Consensus 95 ~~~~l~~~~F~~~l~s~~~~~p~--~~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~w 172 (599)
T PLN02952 95 TRHGLNLDDFFHFLLYDDLNGPI--TPQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLW 172 (599)
T ss_pred cccCcCHHHHHHHHcCccccccc--cccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEee
Confidence 4567999999999999 566666 5579999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCC
Q 042071 159 PSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLK 238 (632)
Q Consensus 159 dG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~ 238 (632)
||+ ++++|||||||||||+|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.|+ .+...
T Consensus 173 dg~-~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~-~~~~~ 250 (599)
T PLN02952 173 PGS-TKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPE-SDSLV 250 (599)
T ss_pred cCC-CCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCC-CcccC
Confidence 998 3357999999999999999999999999999999999999999999999999999999999999999876 44567
Q ss_pred CCCChhhccCcEEEecCCCCCcccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCC
Q 042071 239 EFPSPESLKGKIIISTKPPEDKAKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGE 318 (632)
Q Consensus 239 ~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (632)
.||||++||||||||+|+++..++..... .. .+ .....+ +...++++. .
T Consensus 251 ~lpsP~~Lk~kilik~Kk~~~~~~~~~~~---~~----------------~~-------~~~~~~--~~~~~~~~~---~ 299 (599)
T PLN02952 251 QFPSPESLKHRIIISTKPPKEYLESSGPI---VI----------------KK-------KNNVSP--SGRNSSEET---E 299 (599)
T ss_pred CCCChHHhCCCEEEEecCCchhccccccc---cc----------------cc-------cccCCc--ccccCCccc---c
Confidence 89999999999999999987655432100 00 00 000000 000000000 0
Q ss_pred CCCCccccccccCCCCCCCCCCcccCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccH
Q 042071 319 EVPNLKGIVKTTNGSTNDKDYSDEEGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSE 398 (632)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE 398 (632)
+...+...... .+.+.. . +.+....+..... .++|++|+.|+.+++++.+.+.++..+..++++||||
T Consensus 300 ~~~~~~~~~~~-----~~~~~~-~----~~~~~~~~~~~~~--~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE 367 (599)
T PLN02952 300 EAQTLESMLFE-----QEADSR-S----DSDQDDNKSGELQ--KPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSE 367 (599)
T ss_pred ccccccccccc-----cccccc-c----cccchhhhccccc--chhhhhheEEeccccccccchhhhcccccccccccCH
Confidence 00000000000 000000 0 0000001111222 6889999999999888877766655555678899999
Q ss_pred HHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccccCccceeec
Q 042071 399 LQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGCGYVKK 478 (632)
Q Consensus 399 ~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLK 478 (632)
+++.+++ +.++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.||+||||||
T Consensus 368 ~~~~~~~-~~~~~~~v~~n~~~l~RiYP~g~R~dSsNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlK 446 (599)
T PLN02952 368 QELEKAA-TTNGQDVVRFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKK 446 (599)
T ss_pred HHHHHHH-HhhHHHHHHHhhhhceeeCCCCCcCcCCCCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceEC
Confidence 9999999 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCcccccCCCCCCCcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCC
Q 042071 479 PEFLLEKTGLYRDLFDSEVNLPVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDS 558 (632)
Q Consensus 479 P~~lr~~~~~~~~~~dp~~~~p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn 558 (632)
|++|| +..+.+..|||....|++++|+|+||+|++|+++......+.++++||||+|.|.|.|.|+. +++|+++.+|
T Consensus 447 P~~lr-~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~--~~kTkvi~nN 523 (599)
T PLN02952 447 PDFLM-KKGFHDEVFDPKKKLPVKKTLKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNA--KKKTKIIEDN 523 (599)
T ss_pred CHHHc-ccCCcccccCCCCCCCccceEEEEEEECcccCCCCccccCCccCCCCceEEEEEeccCCCCc--ceeeeeccCC
Confidence 99999 54444567999888888889999999999998655445567778899999999999999998 8899999999
Q ss_pred CCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCcc
Q 042071 559 WVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKRE 627 (632)
Q Consensus 559 ~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~~ 627 (632)
+||+|||+|.|.+..||+|+|+|.|+|+| ..+.++|+||+++||++|++|||||||+|..|+++..++
T Consensus 524 ~nPvWnE~F~F~i~~PELAllrf~V~D~D-~~~~ddfiGq~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~ 591 (599)
T PLN02952 524 WYPAWNEEFSFPLTVPELALLRIEVREYD-MSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVR 591 (599)
T ss_pred CCcccCCeeEEEEEcCCccEEEEEEEecC-CCCCCCeEEEEEcchhHhcCCceeEeCcCCCCCCCCCEE
Confidence 99999999999999999999999999998 677899999999999999999999999999999998764
No 5
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-157 Score=1292.47 Aligned_cols=548 Identities=44% Similarity=0.718 Sum_probs=472.7
Q ss_pred CcceeeeeeccCCCCCCCChhHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcc
Q 042071 1 SYRVCFCFRRWFHVGVSEPPEAIESLFNQYSEN-GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSD 79 (632)
Q Consensus 1 ~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~ 79 (632)
+||+|.++++.|..... .|+||.++|.+|+.+ +.||.++|.+||+++|++..++.+.|++||++|++....+
T Consensus 186 ~~k~~~~~~~~~~~~~~-~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~------ 258 (746)
T KOG0169|consen 186 TGKLEEEEFVKFRKELT-KRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFR------ 258 (746)
T ss_pred cceehHHHHHHHHHhhc-cCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhcc------
Confidence 58899988888877644 455999999999986 9999999999999999999999999999999999643321
Q ss_pred cCCCCCHHHHHHHHCCCCCCCCCC-CCCccCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeec
Q 042071 80 QRKGLNLEAFFKYLLSEKNSPLCP-SRGVHQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLW 158 (632)
Q Consensus 80 ~~~~l~~~~F~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcW 158 (632)
..+.|+++||++||+|.++++++| +..|||||++|||||||+||||||||||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 245699999999999999999975 6789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCC
Q 042071 159 PSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLK 238 (632)
Q Consensus 159 dG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~ 238 (632)
||+ +|||+|||||||||+|.|++||+|||+|||++|+|||||||||||+++||++||++|++|||||||+++......
T Consensus 339 dg~--~~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~ 416 (746)
T KOG0169|consen 339 DGP--NGEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLK 416 (746)
T ss_pred cCC--CCCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCccc
Confidence 999 799999999999999999999999999999999999999999999999999999999999999999988555789
Q ss_pred CCCChhhccCcEEEecCCCCCcccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCC
Q 042071 239 EFPSPESLKGKIIISTKPPEDKAKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGE 318 (632)
Q Consensus 239 ~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (632)
.||||++||||||||+|+++..+...... + . + ....++.. +.
T Consensus 417 ~lPSPe~LK~KILik~Kk~~~~~~~~~~~-~------------------------~-----------~-~~~~d~~~-~~ 458 (746)
T KOG0169|consen 417 ELPSPEELKNKILIKGKKLKELLEADSKE-P------------------------S-----------S-FEVTDEDE-DK 458 (746)
T ss_pred cCcCHHHHhcCEEEecCCCCccccccccc-c------------------------c-----------c-cccccccc-cc
Confidence 99999999999999999987655431100 0 0 0 00000000 00
Q ss_pred CCCCccccccccCCCCCCCCCCcccCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccH
Q 042071 319 EVPNLKGIVKTTNGSTNDKDYSDEEGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSE 398 (632)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE 398 (632)
+ .+.++.. .+.+. ..+.+..+ +++|++||.|+.+++++++...++.+ ..++++||||
T Consensus 459 e--------------~s~e~~~-----~~~~~-~~~~~~~~--~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE 515 (746)
T KOG0169|consen 459 E--------------SSTENDK-----SETDG-QKKSRKIL--APELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSE 515 (746)
T ss_pred c--------------ccccccc-----ccccc-ccchhhhh--hHHHHHHHHHhhccccCCceeccccC-CccccCCccH
Confidence 0 0000000 00010 11112234 89999999999999999998887765 5778999999
Q ss_pred HHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccccCccceeec
Q 042071 399 LQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGCGYVKK 478 (632)
Q Consensus 399 ~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLK 478 (632)
++++|++ +..+.+|++||+++|+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|||||||||
T Consensus 516 ~~~~k~~-~~~~~~~v~~t~r~L~RvYP~~~R~dSSNynPq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlK 594 (746)
T KOG0169|consen 516 RKAKKLI-KEYGPDFVRHTQRNLLRVYPKGLRVDSSNYNPQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLK 594 (746)
T ss_pred HHHHHHH-HHhhhHHHHHhHhheeeecCCccccCCCCCChHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceEC
Confidence 9999999 888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCcccccCCCCC-CCcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCC
Q 042071 479 PEFLLEKTGLYRDLFDSEVN-LPVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKD 557 (632)
Q Consensus 479 P~~lr~~~~~~~~~~dp~~~-~p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~n 557 (632)
|.+|| +. ...|+|... .|++.+|+|+|++|++|+.++..+..+ ...||||.|+|.|+|.|+. +.+|+++++
T Consensus 595 P~~L~-~~---~~~F~P~~~~~~~~~tL~IkI~sGq~~~~~~~~~~~~--~~~dP~v~VeI~Gvp~D~~--~~~Tk~v~~ 666 (746)
T KOG0169|consen 595 PDFLL-DS---GSTFDPKSNLPPVKKTLKIKIISGQGWLPDFGKTKFG--EISDPDVYVEIAGVPADCA--EQKTKVVKN 666 (746)
T ss_pred cHHHc-CC---CCccCCCCCCCCCCceeEEEEEecCcccCCCCCCccc--ccCCCCEEEEEcccccchh--hhhceeecc
Confidence 99999 42 468999766 445558999999999998766554333 4578999999999999999 999997776
Q ss_pred C-CCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCccc
Q 042071 558 S-WVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKREA 628 (632)
Q Consensus 558 n-~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~~~ 628 (632)
| +||.|+|+|+|++..||||+|||.|+|+| ..++|||+||+|+||.+|++|||||||+|..|+.+.+++.
T Consensus 667 NgfnP~W~e~f~F~l~vPELAliRF~V~d~d-~~~~ddF~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asL 737 (746)
T KOG0169|consen 667 NGFNPIWDEEFEFQLSVPELALIRFEVHDYD-YIGKDDFIGQTTLPVSELRQGYRHVPLLSREGEALSSASL 737 (746)
T ss_pred CCcCcccCCeEEEEEeccceeEEEEEEEecC-CCCcccccceeeccHHHhhCceeeeeecCCCCccccceeE
Confidence 5 89999999999999999999999999999 7888999999999999999999999999999999988763
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=6.6e-150 Score=1216.28 Aligned_cols=518 Identities=38% Similarity=0.658 Sum_probs=438.0
Q ss_pred eeeeccCCCCCCCChhHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcc-c
Q 042071 6 FCFRRWFHVGVSEPPEAIESLFNQYSEN-GIMTVDHLHRFL---VEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSD-Q 80 (632)
Q Consensus 6 ~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~lt~~~~~~FL---~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~-~ 80 (632)
+.|.|+|+.+++.+++||.++|.+|+++ +.|+.++|.+|| .++|+|..++.++|+.|++++... +++.+.+ .
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~---~~~~~~~~~ 77 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRR---KCDILAFRN 77 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhh---cccchhhhh
Confidence 3689999999999999999999999866 999999999999 999999999999999999998731 2211222 2
Q ss_pred CCCCCHHHHHHHHCCCC-CCCCCCCCCc-cCCCCCccccccccccccccccCCcCCCC-CChHHHHHHHhCCCcEEEEee
Q 042071 81 RKGLNLEAFFKYLLSEK-NSPLCPSRGV-HQDMKAPLSHYFIYTGHNSYLTGNQLNSK-CSAGPIKDALKRGLRGIELDL 157 (632)
Q Consensus 81 ~~~l~~~~F~~~L~s~~-n~~~~~~~~v-~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~-SS~e~Y~~aL~~GCRcvElDc 157 (632)
.+.|+++||++||+|++ |.+. +..| +|||++|||||||||||||||+||||.|+ ||+|+|++||++|||||||||
T Consensus 78 ~~~l~~~~f~~~L~s~~~n~~~--~~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~ 155 (537)
T PLN02223 78 LRCLELDHLNEFLFSTELNPPI--GDQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDL 155 (537)
T ss_pred ccccCHHHHHHHhcCcccCCcc--ccccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEe
Confidence 36799999999999955 4444 3456 99999999999999999999999999999 999999999999999999999
Q ss_pred cCCCCCCCCceEEecccccccccHHHHHHHHhhcccccC-CCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcC
Q 042071 158 WPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDAS-EYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSEC 236 (632)
Q Consensus 158 WdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~ 236 (632)
|||+ +++|+|+|||||||+|+|+|||+|||+|||++| +||||||||||||++||.+||++|++||||+||+++..+.
T Consensus 156 W~~~--~~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~ 233 (537)
T PLN02223 156 LPDG--KDGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHS 233 (537)
T ss_pred cCCC--CCCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccc
Confidence 9887 689999999999999999999999999999998 9999999999999999999999999999999999874456
Q ss_pred CCCCCChhhccCcEEEecCCCCCcccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCcccccc
Q 042071 237 LKEFPSPESLKGKIIISTKPPEDKAKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEW 316 (632)
Q Consensus 237 ~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (632)
...||||++||||||||+|++++.++..+ ++...
T Consensus 234 ~~~lPSP~~Lk~kIlik~K~~~~~~~~~~----------------------------------------------~~~~~ 267 (537)
T PLN02223 234 LEEFPSPAELQNKILISRRPPKELLYAKA----------------------------------------------DDGGV 267 (537)
T ss_pred cccCCChHHhCCCEEEEcCCCcccccccc----------------------------------------------ccccc
Confidence 78999999999999999999764432110 00000
Q ss_pred CCCCCCccccccccCCCCCCCCCCcccCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeec
Q 042071 317 GEEVPNLKGIVKTTNGSTNDKDYSDEEGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSL 396 (632)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~ 396 (632)
+. . ++ .+..+ ... .++|.+++.++..++++.+ .++
T Consensus 268 ~~----------------~--~~------~~~~~------~~~--~~~y~~li~~~~~~~~~~~-------------~~~ 302 (537)
T PLN02223 268 GV----------------R--NE------LEIQE------GPA--DKNYQSLVGFHAVEPRGML-------------QKA 302 (537)
T ss_pred cc----------------c--cc------ccccc------ccc--ccceeeeeeeeccccccch-------------hhh
Confidence 00 0 00 00000 111 5678889988887765432 334
Q ss_pred cHHHHHHHHHhh--hhhHHHHhhhcCeeEEecCCCC-CCCCCCCcccccccCceEeeecCCCCCcccccccccccccCcc
Q 042071 397 SELQLERAVTKK--YGQDIVRFTQSNVLRVYPKGLR-IDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGC 473 (632)
Q Consensus 397 sE~~~~k~~~~~--~~~~~~~~~~~~l~RvYP~g~R-v~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~c 473 (632)
+|.++.++. +. ++.++++||++||+||||+|+| +|||||||+.+|++|||||||||||+|++||||+|||++||+|
T Consensus 303 ~~~~~~~~~-~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSNYnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~C 381 (537)
T PLN02223 303 LTGKADDIQ-QPGWYERDIISFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGC 381 (537)
T ss_pred hccchhhhh-hccccchhhhhhcccceEEECCCCCccccCCCCCChhhcccceeEeeeccCCCChhHHhhcchhccCCCC
Confidence 455555544 22 4678999999999999999999 5999999999999999999999999999999999999999999
Q ss_pred ceeecCcccccccCCcccccCCCCCCCcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccC
Q 042071 474 GYVKKPEFLLEKTGLYRDLFDSEVNLPVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTE 553 (632)
Q Consensus 474 GYVLKP~~lr~~~~~~~~~~dp~~~~p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTk 553 (632)
||||||++|| +.+++ ..|+|....+++.+|+|+||+|++|+.+++++. +..+++||||+|+|.|.|.|+. +++|.
T Consensus 382 GYVLKP~~Lr-~~~~~-~~FdP~~~~~~~~~L~V~Visgq~~~~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~--~~kT~ 456 (537)
T PLN02223 382 GYVKKPDFLL-NAGPS-GVFYPTENPVVVKILKVKIYMGDGWIVDFKKRI-GRLSKPDLYVRISIAGVPHDEK--IMKTT 456 (537)
T ss_pred CceECChhhc-cCCcc-cccCCCCCcccceEEEEEEEEcccccCCccccc-CCCCCCCeEEEEEEeeccCCcc--eeEEE
Confidence 9999999999 54443 379997655567889999999999975443332 4457899999999999999988 78887
Q ss_pred CCCCCCCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCccc
Q 042071 554 PIKDSWVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKREA 628 (632)
Q Consensus 554 vi~nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~~~ 628 (632)
+..|++||+|||+|+|.|.+||+|+|+|+|+|+| ..+.++|+||+++||++|++|||||||+|++|+++.+++.
T Consensus 457 v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D-~~~~ddfiGQ~~LPv~~Lr~GyR~VpL~~~~g~~l~~~~L 530 (537)
T PLN02223 457 VKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYE-VSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTML 530 (537)
T ss_pred eCCCCcCceecceeEEEEEccCceEEEEEEEecC-CCCCCcEEEEEecchHHhcCCceeEeccCCCcCCCCCceE
Confidence 7666799999999999999999999999999999 7778999999999999999999999999999999988753
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=2e-141 Score=1157.90 Aligned_cols=570 Identities=29% Similarity=0.436 Sum_probs=439.9
Q ss_pred CCCChhHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHhcccccCCCCCCcccCCCCC
Q 042071 16 VSEPPEAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERN--------PKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLN 85 (632)
Q Consensus 16 ~~~~r~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~--------~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~ 85 (632)
-+|+|+||++||.+|+++ .+||.++|.+||++.|++.. +...++..||++|+|..... .+++|+
T Consensus 216 klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a------~~gqms 289 (1189)
T KOG1265|consen 216 KLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNA------EKGQMS 289 (1189)
T ss_pred hcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhh------hccccc
Confidence 379999999999999976 79999999999999999975 44678999999999754332 368999
Q ss_pred HHHHHHHHCCCCCCCCCC-CCCccCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCC
Q 042071 86 LEAFFKYLLSEKNSPLCP-SRGVHQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKK 164 (632)
Q Consensus 86 ~~~F~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~ 164 (632)
.+||.+||++++|.++.+ ....++||+||||||||||||||||||+||.|.||||+|++||+.||||||||||||...+
T Consensus 290 ~dgf~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d 369 (1189)
T KOG1265|consen 290 TDGFVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGED 369 (1189)
T ss_pred hhhhHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCC
Confidence 999999999999999853 4567999999999999999999999999999999999999999999999999999997667
Q ss_pred CCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCc----CCCCC
Q 042071 165 DGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSE----CLKEF 240 (632)
Q Consensus 165 ~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~----~~~~l 240 (632)
+||||+||.|+|+.|.|+|||+||++.||+|||||||||+|||||+.||.+||+||++||||+|++.|..+ .-..|
T Consensus 370 ~EPvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~l 449 (1189)
T KOG1265|consen 370 EEPVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPL 449 (1189)
T ss_pred CCceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999866333 23689
Q ss_pred CChhhccCcEEEecCCCCCccccccc-CCCCC--CCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccC
Q 042071 241 PSPESLKGKIIISTKPPEDKAKDKEN-ELPKS--TSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWG 317 (632)
Q Consensus 241 PSP~~Lk~KILIK~K~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (632)
|||++||+|||||+||..-....... .-+.. .....+.++...... ....+.+.....+. ..-.+...|
T Consensus 450 PsP~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d----~~~~~~~~~~~ge~----~~~~~~~~g 521 (1189)
T KOG1265|consen 450 PSPEDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAED----DSEEQVGLSLSGEE----RAHPEVELG 521 (1189)
T ss_pred CCHHHHhhhhhccccccccccccccccccccccCcccccCCCCcccccC----ccccccCccccccc----ccCcccccc
Confidence 99999999999999986421110000 00000 000000000000000 00000000000000 000000111
Q ss_pred CCCCCccccccccCCCCCCCCCCcccCCCCCC--CCChhh-ccccccccccccceeeeccccCCCchhhhhcccCceEEe
Q 042071 318 EEVPNLKGIVKTTNGSTNDKDYSDEEGSTNAD--GDSEKT-QQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRL 394 (632)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (632)
.+.+......... +++...+..+++.. ..+... ......+++++.||.|.....+.+|.-+-+.+ .+++|+
T Consensus 522 ~~~~~~~~~~~E~-----~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~krN-~~f~ms 595 (1189)
T KOG1265|consen 522 GERPADDEAHPEL-----DEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEKRN-RHFEMS 595 (1189)
T ss_pred cccCCccccchhh-----hhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhhhc-ceeeee
Confidence 1111110000000 00000000000000 000000 01112378899999887655555565554433 578999
Q ss_pred eccHHHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccccCccc
Q 042071 395 SLSELQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRANGGCG 474 (632)
Q Consensus 395 S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~NG~cG 474 (632)
||+|+++..++ ++++.+||.||+++|+||||+|+|||||||+|+.|||+|||||||||||.|.+||||.|||..||+||
T Consensus 596 Sf~E~~~~~~L-k~~~iefV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sG 674 (1189)
T KOG1265|consen 596 SFDESTGLGYL-KKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSG 674 (1189)
T ss_pred echhHHHHHHH-HhCchHHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCcc
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCcccccccCCcccccCCCCCCCc----ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCcc
Q 042071 475 YVKKPEFLLEKTGLYRDLFDSEVNLPV----KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTD 550 (632)
Q Consensus 475 YVLKP~~lr~~~~~~~~~~dp~~~~p~----~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~ 550 (632)
|+|||+||| .+ +..|||....++ ..++.|+|||||-|.. .....||+|.+.|+|.|..++++
T Consensus 675 YllKPdfmR-rp---Dr~fdPFse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~ 740 (1189)
T KOG1265|consen 675 YLLKPDFMR-RP---DRQFDPFSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEF 740 (1189)
T ss_pred ceeChHHhh-CC---CcCcCCcccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhh
Confidence 999999999 65 568999887554 4679999999998752 11346999999999999987788
Q ss_pred ccCCCCCC-CCCccCc-EEEEE-EEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCC
Q 042071 551 QTEPIKDS-WVPAWNK-EFKFQ-LTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKK 625 (632)
Q Consensus 551 kTkvi~nn-~nP~WNE-tf~F~-v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~ 625 (632)
||+++.+| +||+|+| .|.|. |..|+||+|||.|+++. ..||||..+||+.|+.|||||.|++..++++.-
T Consensus 741 rtrt~~~n~~npvy~eepfvF~KVvLpeLA~lRiavyeEg-----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~l 813 (1189)
T KOG1265|consen 741 RTRTVQGNSFNPVYEEEPFVFRKVVLPELASLRIAVYEEG-----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTL 813 (1189)
T ss_pred hhccccCCCCCcccccCCcccceecccchhheeeeeeccC-----CceeeeeccchhcccCcceeEEecCCCCCcccc
Confidence 99999887 8999986 59996 88999999999999976 579999999999999999999999999998743
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-128 Score=1047.04 Aligned_cols=564 Identities=30% Similarity=0.485 Sum_probs=414.3
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCCCCCCCCCCC-CCccCC-
Q 042071 34 GIMTVDHLHRFLVEVQKERNPKK-EDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLSEKNSPLCPS-RGVHQD- 110 (632)
Q Consensus 34 ~~lt~~~~~~FL~~~Q~e~~~~~-~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s~~n~~~~~~-~~v~qD- 110 (632)
..++..+|++||..+|+|..+++ ...++++..|.... .....++.|++++|..||+|.+|+.+++. ..|..|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~-----~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~ 310 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDT-----MRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDD 310 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhh-----hhhccCcceeHHHHHHHHhhcccccccccccccchhh
Confidence 46899999999999999976554 34566677765321 22235689999999999999999999865 356555
Q ss_pred CCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHhh
Q 042071 111 MKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKN 190 (632)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~ 190 (632)
|+.|||||||+||||||||||||.++||.|+|+|||++||||||||||||| +|-|+||||||+||||.|+|||++||+
T Consensus 311 Mn~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGp--d~~pvIyHG~T~TtKIkf~DVlhtIkd 388 (1267)
T KOG1264|consen 311 MNNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGP--DGKPVIYHGHTRTTKIKFDDVLHTIKD 388 (1267)
T ss_pred hcCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCC--CCCceEEeccceeeeeehHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred cccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCccc------cc
Q 042071 191 YAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAK------DK 264 (632)
Q Consensus 191 ~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~------~~ 264 (632)
|||++|+||||||||.|||++||+.||+.+++||||+|++.|-.....+||||.|||.|||||+||.....+ ..
T Consensus 389 hAFvtSeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~ 468 (1267)
T KOG1264|consen 389 HAFVTSEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDK 468 (1267)
T ss_pred hceeccCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcc
Confidence 999999999999999999999999999999999999999987555678999999999999999999532100 00
Q ss_pred c---------cC-------------------------------------------CCCCCCCccCCCccccc--------
Q 042071 265 E---------NE-------------------------------------------LPKSTSCHVNFPPFMKM-------- 284 (632)
Q Consensus 265 ~---------~~-------------------------------------------~~~~~~~~~~~~~~~~~-------- 284 (632)
+ +. .+.++..|+..-+|+.-
T Consensus 469 edd~~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAe 548 (1267)
T KOG1264|consen 469 EDDHKNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAE 548 (1267)
T ss_pred cccchhhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHH
Confidence 0 00 00011111110011000
Q ss_pred --------------------------------------ccccccccc---------------------------------
Q 042071 285 --------------------------------------FNHTRKKVC--------------------------------- 293 (632)
Q Consensus 285 --------------------------------------~~~~~~~~~--------------------------------- 293 (632)
.+|++.+..
T Consensus 549 kll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~ 628 (1267)
T KOG1264|consen 549 KLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRC 628 (1267)
T ss_pred HHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccc
Confidence 000000000
Q ss_pred -----------ccc-------------------------------------------------ccC--------------
Q 042071 294 -----------GQK-------------------------------------------------AKH-------------- 299 (632)
Q Consensus 294 -----------~~~-------------------------------------------------~~~-------------- 299 (632)
.|. |+-
T Consensus 629 aeF~m~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl 708 (1267)
T KOG1264|consen 629 AEFEMRLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVL 708 (1267)
T ss_pred cceEEEecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEe
Confidence 000 000
Q ss_pred ------------------C-------CCC------------CC-------------------C-------------CCC-
Q 042071 300 ------------------Q-------EYP------------RP-------------------S-------------ASS- 309 (632)
Q Consensus 300 ------------------~-------~~~------------~~-------------------~-------------~~~- 309 (632)
. .+| ++ + +..
T Consensus 709 ~t~~FesLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~ 788 (1267)
T KOG1264|consen 709 GTSAFESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRS 788 (1267)
T ss_pred ccHHHHHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCc
Confidence 0 000 00 0 000
Q ss_pred --------------Ccccccc-----CCCC----C-----Ccccc-ccccCC-------------------------CCC
Q 042071 310 --------------SADEAEW-----GEEV----P-----NLKGI-VKTTNG-------------------------STN 335 (632)
Q Consensus 310 --------------~~~~~~~-----~~~~----~-----~~~~~-~~~~~~-------------------------~~~ 335 (632)
..+++.| |+.+ | .+... ..+.+. ...
T Consensus 789 DELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q 868 (1267)
T KOG1264|consen 789 DELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQ 868 (1267)
T ss_pred ccccccccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeeccc
Confidence 0000101 1000 0 00000 000000 000
Q ss_pred CCCCC-----cccCC---------CCCCC--------------------CChhhcc-ccccccccccceeeeccccCC--
Q 042071 336 DKDYS-----DEEGS---------TNADG--------------------DSEKTQQ-NVVEAPKYRHLISMHAGKPKG-- 378 (632)
Q Consensus 336 ~~~~~-----~~~~~---------~~~~~--------------------~~~~~~~-~~~~~~~~~~l~~~~~~~~~~-- 378 (632)
..+.. -+... .+..+ ...+... ...+|.|+++||+|+...|+.
T Consensus 869 ~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~~ 948 (1267)
T KOG1264|consen 869 GKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTKD 948 (1267)
T ss_pred ccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCccc
Confidence 00000 00000 00000 0000000 012388999999999988742
Q ss_pred CchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccCceEeeecCCCCCc
Q 042071 379 GLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGR 458 (632)
Q Consensus 379 ~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~ 458 (632)
.+. ++....|+||.|.|+.|++ .+.+..|+.||+++|+||||+|.|+|||||||+++|++|||||||||||.|+
T Consensus 949 ~~~-----n~~f~em~SF~EtKadk~v-~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDK 1022 (1267)
T KOG1264|consen 949 NLE-----NPDFREMSSFVETKADKIV-RQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDK 1022 (1267)
T ss_pred ccc-----cHHHHHHhcccchhHHHHH-HhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCc
Confidence 222 1223468999999999999 6778889999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCccceeecCcccccccCCcccccCCCCC-C---CcceEEEEEEEecccccccCCCcccCCCCCCCcee
Q 042071 459 PLWLMHGMFRANGGCGYVKKPEFLLEKTGLYRDLFDSEVN-L---PVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYA 534 (632)
Q Consensus 459 ~m~lN~~~F~~NG~cGYVLKP~~lr~~~~~~~~~~dp~~~-~---p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV 534 (632)
+||+|+|+|..||+|||||||++|| . +.|||..+ . -.+.+|+|+||.|+.|+... .+..-|||
T Consensus 1023 pMQmNqa~F~~ngrcGYvLqPs~Mr-t-----e~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~g-------r~i~cPfV 1089 (1267)
T KOG1264|consen 1023 PMQMNQALFSLNGRCGYVLQPSSMR-T-----EKFDPMNPESQRGLLPMTLSVKVLGARHLPKLG-------RSIACPFV 1089 (1267)
T ss_pred hhhhhHHHhhcCCceeeEecchhcc-c-----ccCCCCChHHhccccceEEEEEEeeccccccCC-------CCccCCcE
Confidence 9999999999999999999999999 2 46888653 1 12467999999999998421 13345799
Q ss_pred EEEEecCCCCCCCCccccCCCCC-CCCCccC-cEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCceE
Q 042071 535 KVGIAGVPGDTSSMTDQTEPIKD-SWVPAWN-KEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRA 612 (632)
Q Consensus 535 ~V~i~g~p~d~~~~k~kTkvi~n-n~nP~WN-Etf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ 612 (632)
+|+|.|.+.|.. +++|++|.+ ++||+|| |+|+|.|.+|++|+|||.|+|.| +++...||||+++||.+|+.|||.
T Consensus 1090 evEiiGa~~Dt~--~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeD-mfs~~~FiaqA~yPv~~ik~GfRs 1166 (1267)
T KOG1264|consen 1090 EVEIIGAEYDTN--KFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEED-MFSDPNFLAQATYPVKAIKSGFRS 1166 (1267)
T ss_pred EEEEeccccCCC--ceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEeccc-ccCCcceeeeeecchhhhhcccee
Confidence 999999999988 777776655 5899999 99999999999999999999999 998888999999999999999999
Q ss_pred EEccCCCCCccCCc
Q 042071 613 VPLHDRKGNEYKKR 626 (632)
Q Consensus 613 ipL~d~~g~~~~~~ 626 (632)
|||+|...+.+.-+
T Consensus 1167 VpLkN~ySEdlELa 1180 (1267)
T KOG1264|consen 1167 VPLKNGYSEDLELA 1180 (1267)
T ss_pred eecccCchhhhhhh
Confidence 99999998866433
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=2.2e-111 Score=842.44 Aligned_cols=258 Identities=34% Similarity=0.516 Sum_probs=233.2
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +|||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~--~~eP~V~HG~tlts~i~f~~v~~~ 78 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGP--NQEPIIYHGYTFTSKILFCDVLRA 78 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCC--CCCcEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+|||||||||||+++||.+||+||+++|||+|++++..+....||||++||||||||+|+++.
T Consensus 79 I~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~ki-------- 150 (258)
T cd08629 79 IRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLKL-------- 150 (258)
T ss_pred HHHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEeccccc--------
Confidence 999999999999999999999999999999999999999999987555567999999999999999987521
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 151 -------------------------------------------------------------------------------- 150 (258)
T cd08629 151 -------------------------------------------------------------------------------- 150 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
++++++|+.|..++.++++......++..++++||||+++.+++ ++++.+|++||++||+||||+
T Consensus 151 --------------~~eLs~l~~y~~~~~f~~~~~~~~~~~~~~~~~S~sE~~~~~~~-~~~~~~~v~~n~~~l~RiYP~ 215 (258)
T cd08629 151 --------------VPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLL-QESGNGFVRHNVSCLSRIYPA 215 (258)
T ss_pred --------------cHHHHHHHHHhcCCCCCCccchhhcCCCcceecccCHHHHHHHH-HHhHHHHHHhchhccceeCCC
Confidence 12234444444444445555443323345689999999999999 888999999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 216 g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08629 216 GWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN 258 (258)
T ss_pred CCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhchhcCC
Confidence 9999999999999999999999999999999999999999987
No 10
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=4.7e-110 Score=835.48 Aligned_cols=256 Identities=33% Similarity=0.533 Sum_probs=221.8
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+.+++|||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999534689999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhccccCCCCCCc----CCCCCCChhhccCcEEEecCCCCCccc
Q 042071 188 IKNYAFDASEYPVVITFEDHL-PPHLQGEVAALLTRIFDKEILLPDDSE----CLKEFPSPESLKGKIIISTKPPEDKAK 262 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~mA~il~~ifGd~L~~~~~~~----~~~~lPSP~~Lk~KILIK~K~~~~~~~ 262 (632)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++..+ ....||||++||||||||+|+.++..
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~els- 159 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEEMS- 159 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeecccccch-
Confidence 999999999999999999999 799999999999999999999977432 23689999999999999999842110
Q ss_pred ccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcc
Q 042071 263 DKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDE 342 (632)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (632)
T Consensus 160 -------------------------------------------------------------------------------- 159 (261)
T cd08624 160 -------------------------------------------------------------------------------- 159 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCee
Q 042071 343 EGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVL 422 (632)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~ 422 (632)
+|+.|..+..+.+|....... ...+++||+|+++.+++ ++++.+|++||++||+
T Consensus 160 ------------------------~lv~y~~~~kf~~f~~~~~~~-~~~~~~S~sE~k~~~l~-~~~~~~fv~~N~~~l~ 213 (261)
T cd08624 160 ------------------------SLVNYIQPTKFVSFEFSAQKN-RSYVISSFTELKAYDLL-SKASVQFVEYNKRQMS 213 (261)
T ss_pred ------------------------hhhcccCCcCCCCcccccccC-CcceeecccHHHHHHHH-HHhHHHHHHhchhhee
Confidence 000011000111111111111 13467999999999999 8888999999999999
Q ss_pred EEecCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 423 RVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 423 RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 214 RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n 261 (261)
T cd08624 214 RIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPMQQNMALFEFN 261 (261)
T ss_pred eeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 999999999999999999999999999999999999999999999987
No 11
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=3.1e-110 Score=831.01 Aligned_cols=253 Identities=37% Similarity=0.556 Sum_probs=221.9
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +||||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~--~~eP~V~HG~tlts~i~f~~v~~~ 78 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGP--DGEPIVHHGYTLTSKILFKDVIET 78 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCC--CCCcEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999 889999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCC-CcCCCCCCChhhccCcEEEecCCCCCccccccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDD-SECLKEFPSPESLKGKIIISTKPPEDKAKDKEN 266 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~-~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~ 266 (632)
||+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. .+....||||++||||||||+|++...+.+
T Consensus 79 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~Ls~--- 155 (254)
T cd08633 79 INKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALSD--- 155 (254)
T ss_pred HHHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhhhH---
Confidence 9999999999999999999999999999999999999999998653 234578999999999999999985321110
Q ss_pred CCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCC
Q 042071 267 ELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGST 346 (632)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (632)
T Consensus 156 -------------------------------------------------------------------------------- 155 (254)
T cd08633 156 -------------------------------------------------------------------------------- 155 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEec
Q 042071 347 NADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYP 426 (632)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP 426 (632)
|+.+..+..+.++.... ...++++||+|+++.+++ +.++.+|++||++||+||||
T Consensus 156 ---------------------l~~y~~~~~~~~~~~~~---~~~~~~~S~sE~k~~~l~-~~~~~~~v~~N~~~l~RvYP 210 (254)
T cd08633 156 ---------------------LVKYTKSVRVHDIETEA---TSSWQVSSFSETKAHQIL-QQKPAQYLRFNQRQLSRIYP 210 (254)
T ss_pred ---------------------HhhhcccCCcCcccccc---ccceeeecccHHHHHHHH-HHCHHHHHHhhhhcccccCC
Confidence 00000000000010000 113578999999999999 88999999999999999999
Q ss_pred CCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 427 KGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 427 ~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 211 ~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 254 (254)
T cd08633 211 SSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSAN 254 (254)
T ss_pred CCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcccccCC
Confidence 99999999999999999999999999999999999999999987
No 12
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=5.8e-110 Score=827.26 Aligned_cols=252 Identities=35% Similarity=0.563 Sum_probs=220.9
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||+ +|||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~--~~eP~V~HG~Tlts~i~f~dv~~a 78 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGP--DGEPVVHHGYTLTSKITFRDVIET 78 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCC--CCCcEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCC-CcCCCCCCChhhccCcEEEecCCCCCccccccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDD-SECLKEFPSPESLKGKIIISTKPPEDKAKDKEN 266 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~-~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~ 266 (632)
||+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. .+....||||++||||||||+|++...+.+
T Consensus 79 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~els~--- 155 (253)
T cd08632 79 INKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDLSD--- 155 (253)
T ss_pred HHHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHHHh---
Confidence 9999999999999999999999999999999999999999987652 334578999999999999999985311100
Q ss_pred CCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCC
Q 042071 267 ELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGST 346 (632)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (632)
T Consensus 156 -------------------------------------------------------------------------------- 155 (253)
T cd08632 156 -------------------------------------------------------------------------------- 155 (253)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEec
Q 042071 347 NADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYP 426 (632)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP 426 (632)
|+.+..+..+.++.+. ....+++||||+++.+++ +.++.+|++||++||+||||
T Consensus 156 ---------------------l~~~~~~~~~~~~~~~----~~~~~~~SlsE~~~~~l~-~~~~~~~v~~n~~~l~RvYP 209 (253)
T cd08632 156 ---------------------LVVYTNSVAAQDIVDD----GSTGNVLSFSETRAHQLV-QQKAEQFMTYNQKQLTRIYP 209 (253)
T ss_pred ---------------------hhhhccCcccccchhc----CCcccccccCHHHHHHHH-HHhHHHHHHHhhhccceeCC
Confidence 0000000000000000 012378999999999999 88999999999999999999
Q ss_pred CCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 427 KGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 427 ~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 210 ~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g~F~~n 253 (253)
T cd08632 210 SAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRAKFMVN 253 (253)
T ss_pred CCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcccccCC
Confidence 99999999999999999999999999999999999999999987
No 13
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=9.1e-110 Score=833.42 Aligned_cols=257 Identities=32% Similarity=0.524 Sum_probs=233.7
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +|||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~--~~eP~V~HG~tlts~i~f~~v~~~ 78 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGP--GGEPVIYHGHTLTSKILFRDVIQA 78 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCC--CCCcEEeeCCccccceEHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCc-CCCCCCChhhccCcEEEecCCCCCccccccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSE-CLKEFPSPESLKGKIIISTKPPEDKAKDKEN 266 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~ 266 (632)
||+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++..+ ....||||++||||||||+|+++.
T Consensus 79 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~i------- 151 (258)
T cd08630 79 VRQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQI------- 151 (258)
T ss_pred HHHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCccc-------
Confidence 999999999999999999999999999999999999999999877333 356899999999999999987420
Q ss_pred CCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCC
Q 042071 267 ELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGST 346 (632)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (632)
T Consensus 152 -------------------------------------------------------------------------------- 151 (258)
T cd08630 152 -------------------------------------------------------------------------------- 151 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEec
Q 042071 347 NADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYP 426 (632)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP 426 (632)
+++|++|+.|..++.++++...... ....+++||+|+++.+++ ++++.+|++||++||+||||
T Consensus 152 ---------------~~els~L~~y~~~~~~~~~~~~~~~-~~~~~~~S~sE~k~~~l~-~~~~~~~v~~n~~~l~RiYP 214 (258)
T cd08630 152 ---------------SPELSALAVYCQATRLRTLEPAPVQ-PQPCQVSSLSERKAKKLI-REAGNSFVRHNARQLTRVYP 214 (258)
T ss_pred ---------------hHHHHhhHhhcccccCCCcchhhhc-CCCccccccCHHHHHHHH-HHhHHHHHHhhhcccceeCC
Confidence 3446667766666555666554311 123488999999999999 88999999999999999999
Q ss_pred CCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 427 KGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 427 ~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 215 kgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~N 258 (258)
T cd08630 215 LGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVN 258 (258)
T ss_pred CCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 99999999999999999999999999999999999999999987
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=1.7e-109 Score=829.64 Aligned_cols=256 Identities=35% Similarity=0.544 Sum_probs=223.0
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
|||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~--~~ep~v~HG~tlt~~i~f~~v~~~ 78 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGA--DNEPVVYHGYTLTSKILFKEVITT 78 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCC--CCCcEEecCCCcccccCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCc-CCCCCCChhhccCcEEEecCCCCCccccccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSE-CLKEFPSPESLKGKIIISTKPPEDKAKDKEN 266 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~ 266 (632)
||+|||++|+|||||||||||+++||.+||+||+++|||+|+.++..+ ....||||++||||||||+|+.-
T Consensus 79 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki-------- 150 (257)
T cd08595 79 VEKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI-------- 150 (257)
T ss_pred HHHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc--------
Confidence 999999999999999999999999999999999999999999876333 24799999999999999998721
Q ss_pred CCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCC
Q 042071 267 ELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGST 346 (632)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (632)
T Consensus 151 -------------------------------------------------------------------------------- 150 (257)
T cd08595 151 -------------------------------------------------------------------------------- 150 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEec
Q 042071 347 NADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYP 426 (632)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP 426 (632)
++++++|+.|..+..+.++...... ...++++||+|+++.+++ +.++.+|++||++||+||||
T Consensus 151 ---------------~~els~L~~y~~~~~~~~~~~~~~~-~~~~~~~S~sE~k~~~l~-~~~~~~~v~~n~r~l~RvYP 213 (257)
T cd08595 151 ---------------AKALSDLVIYTKSEKFCSFTHSRDN-QHSYENNSIGENKARKLL-KSSGADFVGHTQRFITRIYP 213 (257)
T ss_pred ---------------ChhHHHHhhhcCCcCCCCccccccc-cccceecccCHHHHHHHH-HHhHHHHHHHhhcCCceeCc
Confidence 0011112211111111111111100 013478999999999999 88999999999999999999
Q ss_pred CCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 427 KGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 427 ~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 214 ~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~N 257 (257)
T cd08595 214 KGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNGKFLDN 257 (257)
T ss_pred CCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcCcccCC
Confidence 99999999999999999999999999999999999999999987
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=2.8e-109 Score=828.61 Aligned_cols=257 Identities=34% Similarity=0.552 Sum_probs=224.9
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
|||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +|||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~--~~eP~V~HG~tlts~i~f~~v~~~ 78 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGP--NGEPIVYHGHTFTSKILFKDVVAA 78 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCC--CCCcEEeeCCcccCCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCc-CCCCCCChhhccCcEEEecCCCCCccccccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSE-CLKEFPSPESLKGKIIISTKPPEDKAKDKEN 266 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~ 266 (632)
||+|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ....||||++||||||||+|+++.
T Consensus 79 Ik~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~~------- 151 (258)
T cd08631 79 VAQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIRL------- 151 (258)
T ss_pred HHHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeeccccc-------
Confidence 999999999999999999999999999999999999999999977332 347999999999999999998521
Q ss_pred CCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCC
Q 042071 267 ELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGST 346 (632)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (632)
T Consensus 152 -------------------------------------------------------------------------------- 151 (258)
T cd08631 152 -------------------------------------------------------------------------------- 151 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEec
Q 042071 347 NADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYP 426 (632)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP 426 (632)
++++++|+.|..+..+.++...... ...++++||+|+++.+++ +.++.+|++||++||+||||
T Consensus 152 ---------------~~eLs~L~~y~~~~~f~~~~~~~~~-~~~~~~~SlsE~~~~~l~-~~~~~~~v~~n~~~l~RiYP 214 (258)
T cd08631 152 ---------------SPELSDCVIYCKSVSFRSFTHSREH-YHFYEISSFTETKARKLI-REAGNEFVQHNTWQLSRVYP 214 (258)
T ss_pred ---------------cHHHHHhHhhhcccccCCccccccc-CccceecccCHHHHHHHH-HhchHHHHHHHHhcCceeCc
Confidence 1112222222222222222211000 113478999999999999 88999999999999999999
Q ss_pred CCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 427 KGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 427 ~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 215 ~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08631 215 SGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDGLFRQN 258 (258)
T ss_pred CCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcchhcCC
Confidence 99999999999999999999999999999999999999999987
No 16
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=5e-109 Score=826.38 Aligned_cols=253 Identities=33% Similarity=0.502 Sum_probs=220.5
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++++||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999745689999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCc----CCCCCCChhhccCcEEEecCCCCCcccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSE----CLKEFPSPESLKGKIIISTKPPEDKAKD 263 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~----~~~~lPSP~~Lk~KILIK~K~~~~~~~~ 263 (632)
|++|||++|+||||||||||||++||.+||+||+++|||+||.++... ....||||++||||||||+|+..+..
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L~-- 158 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSLV-- 158 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhhh--
Confidence 999999999999999999999999999999999999999999976332 23689999999999999999731100
Q ss_pred cccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCccc
Q 042071 264 KENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEE 343 (632)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (632)
.+- . +.
T Consensus 159 -------------------------------------~y~---------~---~~------------------------- 164 (257)
T cd08626 159 -------------------------------------NYA---------Q---PV------------------------- 164 (257)
T ss_pred -------------------------------------ccc---------c---cC-------------------------
Confidence 000 0 00
Q ss_pred CCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeE
Q 042071 344 GSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLR 423 (632)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~R 423 (632)
+ +.++....... ..++++||+|+++.+++ ++++.+|++||++||+|
T Consensus 165 -------------------------------~-~~~~~~~~~~~-~~~~~~S~sE~k~~~~~-~~~~~~~v~~n~~~l~R 210 (257)
T cd08626 165 -------------------------------K-FQGFDVAEERN-IHFNMSSFNESVGLGYL-KTSAIEFVNYNKRQMSR 210 (257)
T ss_pred -------------------------------C-CCCcCchhhcC-CCccccccCHHHHHHHH-HHHHHHHHHHhhhcCce
Confidence 0 00000000000 13478999999999999 88899999999999999
Q ss_pred EecCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 424 VYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 424 vYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 211 iYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~n 257 (257)
T cd08626 211 IYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGKFEYN 257 (257)
T ss_pred eCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhhccccCC
Confidence 99999999999999999999999999999999999999999999987
No 17
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=3.6e-109 Score=826.08 Aligned_cols=249 Identities=36% Similarity=0.562 Sum_probs=222.2
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +|||||||||||||+|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~--~~eP~V~HG~tlts~i~f~dv~~~ 78 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGD--DGMPIIYHGHTLTTKIPFKDVVEA 78 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCC--CCCcEEeeCCCcccCcCHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCC--C--cCCCCCCChhhccCcEEEecCCCCCcccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDD--S--ECLKEFPSPESLKGKIIISTKPPEDKAKD 263 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~--~--~~~~~lPSP~~Lk~KILIK~K~~~~~~~~ 263 (632)
||+|||++|+||||||||||||.+||.+||+||+++|||+|++++. . .....||||++||||||||+|++++
T Consensus 79 I~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~e---- 154 (254)
T cd08596 79 INRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAPE---- 154 (254)
T ss_pred HHHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcHH----
Confidence 9999999999999999999999999999999999999999998652 1 2246899999999999999987421
Q ss_pred cccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCccc
Q 042071 264 KENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEE 343 (632)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (632)
T Consensus 155 -------------------------------------------------------------------------------- 154 (254)
T cd08596 155 -------------------------------------------------------------------------------- 154 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCChhhccccccccccccceee-eccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCee
Q 042071 344 GSTNADGDSEKTQQNVVEAPKYRHLISM-HAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVL 422 (632)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~ 422 (632)
+++|+.| .+.+++ ++.. +..++++||+|+++.+++ ++++.+|++||++||+
T Consensus 155 ---------------------ls~l~~y~~~~k~~-~~~~-----~~~~~~~S~sE~~~~~~~-~~~~~~lv~~n~~~l~ 206 (254)
T cd08596 155 ---------------------LSDLVIYCQAVKFP-GLST-----PKCYHISSLNENAAKRLC-RRYPQKLVQHTRCQLL 206 (254)
T ss_pred ---------------------HHHHHHHhcCccCC-CCCc-----cccceecccCHHHHHHHH-HHCHHHHHHhhhhcce
Confidence 1111111 122221 2221 224588999999999999 8889999999999999
Q ss_pred EEecCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 423 RVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 423 RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 207 RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 254 (254)
T cd08596 207 RTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMHLNAAMFEAN 254 (254)
T ss_pred eeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHHhhhchhcCC
Confidence 999999999999999999999999999999999999999999999987
No 18
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=2.4e-108 Score=821.51 Aligned_cols=253 Identities=36% Similarity=0.546 Sum_probs=220.6
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+.+++||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999833489999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCc----CCCCCCChhhccCcEEEecCCCCCcccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSE----CLKEFPSPESLKGKIIISTKPPEDKAKD 263 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~----~~~~lPSP~~Lk~KILIK~K~~~~~~~~ 263 (632)
||+|||++|+||||||||||||++||.+||+||+++|||+|+.++..+ ....||||++||||||||+|+..+..
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L~-- 158 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSLV-- 158 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhhh--
Confidence 999999999999999999999999999999999999999999977432 23689999999999999999831100
Q ss_pred cccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCccc
Q 042071 264 KENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEE 343 (632)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (632)
.+- . +.
T Consensus 159 -------------------------------------~y~---------~---~~------------------------- 164 (257)
T cd08591 159 -------------------------------------NYI---------Q---PV------------------------- 164 (257)
T ss_pred -------------------------------------ccc---------c---CC-------------------------
Confidence 000 0 00
Q ss_pred CCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeE
Q 042071 344 GSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLR 423 (632)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~R 423 (632)
+ +.++....... ..++++||||+++.+++ ++++.+|++||++||+|
T Consensus 165 -------------------------------~-f~~~~~~~~~~-~~~~~~S~sE~~~~~~~-~~~~~~~v~~n~~~l~R 210 (257)
T cd08591 165 -------------------------------K-FQGFEVAEKRN-KHYEMSSFNESKGLGYL-KKSPIEFVNYNKRQLSR 210 (257)
T ss_pred -------------------------------C-CCCccchhhcC-CcceecccCHHHHHHHH-HHHHHHHHHHhhhcCce
Confidence 0 00000000000 13478999999999999 88899999999999999
Q ss_pred EecCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 424 VYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 424 vYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 211 vYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 257 (257)
T cd08591 211 IYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGKFEYN 257 (257)
T ss_pred eCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHHhhcccccCC
Confidence 99999999999999999999999999999999999999999999987
No 19
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.9e-108 Score=822.67 Aligned_cols=253 Identities=31% Similarity=0.513 Sum_probs=219.9
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+..++|||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999843589999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhccccCCCCCCc----CCCCCCChhhccCcEEEecCCCCCccc
Q 042071 188 IKNYAFDASEYPVVITFEDHL-PPHLQGEVAALLTRIFDKEILLPDDSE----CLKEFPSPESLKGKIIISTKPPEDKAK 262 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~mA~il~~ifGd~L~~~~~~~----~~~~lPSP~~Lk~KILIK~K~~~~~~~ 262 (632)
||+|||++|+||||||||||| +++||.+||+||+++|||+|++++..+ ....||||++||||||||+|+..+..
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs~Lv- 159 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMSNLV- 159 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchhccc-
Confidence 999999999999999999999 599999999999999999999977332 34689999999999999999742100
Q ss_pred ccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcc
Q 042071 263 DKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDE 342 (632)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (632)
T Consensus 160 -------------------------------------------------------------------------------- 159 (258)
T cd08623 160 -------------------------------------------------------------------------------- 159 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCee
Q 042071 343 EGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVL 422 (632)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~ 422 (632)
.|..+..+.+|..... ....++++||+|+++.+++ ++++.+|++||++||+
T Consensus 160 ---------------------------~y~~~v~f~~f~~~~~-~~~~~~~~S~sE~k~~~l~-~~~~~~~v~~N~~~l~ 210 (258)
T cd08623 160 ---------------------------NYIQPVKFESFEASKK-RNKSFEMSSFVETKGLEQL-TKSPVEFVEYNKMQLS 210 (258)
T ss_pred ---------------------------ccccCcccCCcccccc-cCCCccccCccHHHHHHHH-HhCHHHHHHHhhhhce
Confidence 0000000000110000 0013468999999999999 8889999999999999
Q ss_pred EEecCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 423 RVYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 423 RvYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
||||+|+|||||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 211 RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~~ 258 (258)
T cd08623 211 RIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN 258 (258)
T ss_pred eeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcchhhhcccccCC
Confidence 999999999999999999999999999999999999999999999987
No 20
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=3e-108 Score=824.49 Aligned_cols=257 Identities=35% Similarity=0.559 Sum_probs=228.3
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
+||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +||||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~--~~eP~v~HG~t~t~~i~f~~v~~~ 78 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGP--DGEPIIYHGHTLTSKILFKDVIQA 78 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCC--CCCcEEeeCCccccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+||||||||||||++||.+||+||+++|||+|+.++..+....||||++||||||||+|+++.
T Consensus 79 I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~i-------- 150 (257)
T cd08593 79 IREYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLKL-------- 150 (257)
T ss_pred HHHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEeccccc--------
Confidence 999999999999999999999999999999999999999999977555457899999999999999997520
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 151 -------------------------------------------------------------------------------- 150 (257)
T cd08593 151 -------------------------------------------------------------------------------- 150 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
.+++++|+.+..+..++++.+... .....+++||||+++.+++ ++++.+|++||++||+||||+
T Consensus 151 --------------~~els~L~~~~~~~k~~~~~~~~~-~~~~~~~~SlsE~k~~~~~-~~~~~~lv~~n~~~l~RvYP~ 214 (257)
T cd08593 151 --------------AKELSDLVIYCKSVHFKSFEHSKE-NYHFYEMSSFSESKALKLA-QESGNEFVRHNKRQLSRIYPA 214 (257)
T ss_pred --------------cHHHHhhhhhcccccCCChhhhcc-cCCCceeecCCHHHHHHHH-HHhHHHHHHhhhhccceeCCC
Confidence 122333333322222333433221 1234588999999999999 888999999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 215 g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~F~~N 257 (257)
T cd08593 215 GLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGLFRQN 257 (257)
T ss_pred CCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhchhcCC
Confidence 9999999999999999999999999999999999999999987
No 21
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=8.6e-108 Score=822.81 Aligned_cols=252 Identities=33% Similarity=0.519 Sum_probs=220.0
Q ss_pred CCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHH
Q 042071 109 QDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETI 188 (632)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI 188 (632)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||+..++||+||||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999996336899999999999999999999999
Q ss_pred hhcccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhccccCCCCCCc----CCCCCCChhhccCcEEEecCCCCCcccc
Q 042071 189 KNYAFDASEYPVVITFEDHL-PPHLQGEVAALLTRIFDKEILLPDDSE----CLKEFPSPESLKGKIIISTKPPEDKAKD 263 (632)
Q Consensus 189 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~mA~il~~ifGd~L~~~~~~~----~~~~lPSP~~Lk~KILIK~K~~~~~~~~ 263 (632)
|+|||++|+||||||||||| |.+||++||++|++||||+|++++..+ ....||||++||||||||+|+..+..
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSdLv-- 159 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMSTLV-- 159 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccccc--
Confidence 99999999999999999999 699999999999999999999976432 24689999999999999999742110
Q ss_pred cccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCccc
Q 042071 264 KENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEE 343 (632)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (632)
T Consensus 160 -------------------------------------------------------------------------------- 159 (258)
T cd08625 160 -------------------------------------------------------------------------------- 159 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeE
Q 042071 344 GSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLR 423 (632)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~R 423 (632)
.|..+.++.++.+.... ...++++||+|+++.+++ ++++.+|++||++||+|
T Consensus 160 --------------------------vy~~~vkf~~f~~~~~~-~~~~~~~S~sE~k~~~l~-~~~~~~~v~~N~~~l~R 211 (258)
T cd08625 160 --------------------------NYIEPVKFKSFEAAAKR-NKFFEMSSFVETKAMEQL-TKSPMEFVEYNKKQLSR 211 (258)
T ss_pred --------------------------ceecccccCCchhhhcc-CCcceecCccHHHHHHHH-HhCHHHHHHhhhcceee
Confidence 00000000011111100 113478999999999999 78889999999999999
Q ss_pred EecCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 424 VYPKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 424 vYP~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|||+|+|||||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 212 vYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n 258 (258)
T cd08625 212 IYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN 258 (258)
T ss_pred eccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcchhhhcccccCC
Confidence 99999999999999999999999999999999999999999999987
No 22
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.4e-107 Score=815.95 Aligned_cols=252 Identities=35% Similarity=0.570 Sum_probs=224.2
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
.|||++|||||||+|||||||+|+||.|+||+|+|++||++||||||||||||+ +|||+||||||+|++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~--~~eP~V~HG~t~ts~i~f~dv~~~ 78 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGP--DGKPIIYHGWTRTTKIKFDDVVQA 78 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCC--CCCeEEeeCCCccCCcCHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999998 789999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
|++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.......||||++||||||||+|+..
T Consensus 79 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~--------- 149 (254)
T cd08628 79 IKDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI--------- 149 (254)
T ss_pred HHHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC---------
Confidence 99999999999999999999999999999999999999999987655556799999999999999998741
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 150 -------------------------------------------------------------------------------- 149 (254)
T cd08628 150 -------------------------------------------------------------------------------- 149 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccC--CCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEe
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPK--GGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVY 425 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvY 425 (632)
++++++|+.|..+..+ .++. .+...+++||+|+++.+++ ++.+.+|++||++||+|||
T Consensus 150 --------------~~eLs~l~~y~~~~~~~~~~~~-----~~~~~~~~S~sE~k~~~~~-~~~~~~~v~~N~~~l~RvY 209 (254)
T cd08628 150 --------------AIELSDLVVYCKPTSKTKDNLE-----NPDFKEIRSFVETKAPSII-RQKPVQLLKYNRKGLTRVY 209 (254)
T ss_pred --------------CHHHHhhHhhhcccccccCCcc-----cccccccccccHHHHHHHH-HhHHHHHHHHhHhhhhhhC
Confidence 1122233333222111 0111 1123368999999999999 8889999999999999999
Q ss_pred cCCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 426 PKGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 426 P~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 210 P~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~n 254 (254)
T cd08628 210 PKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254 (254)
T ss_pred CCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhhccCC
Confidence 999999999999999999999999999999999999999999987
No 23
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=3.6e-107 Score=798.08 Aligned_cols=226 Identities=42% Similarity=0.643 Sum_probs=215.8
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
|||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +|||||||||||||+|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~--~~ePvV~HG~tlts~i~f~dv~~a 78 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGP--DGEPVVHHGYTLTSKILFRDVIET 78 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCC--CCCcEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCC-CCcCCCCCCChhhccCcEEEecCCCCCccccccc
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPD-DSECLKEFPSPESLKGKIIISTKPPEDKAKDKEN 266 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~-~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~ 266 (632)
||+|||++|+||||||||||||++||.+||+||+++|||+|++++ ..+....||||++||||||||+|+
T Consensus 79 I~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~---------- 148 (227)
T cd08594 79 INKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK---------- 148 (227)
T ss_pred HHHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc----------
Confidence 999999999999999999999999999999999999999999864 234467999999999999999631
Q ss_pred CCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCC
Q 042071 267 ELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGST 346 (632)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (632)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEec
Q 042071 347 NADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYP 426 (632)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP 426 (632)
.+++||+|+++.+++ ++++.+|++||++||+||||
T Consensus 149 --------------------------------------------~~~~S~sE~~~~~~~-~~~~~~~v~~n~~~l~RiYP 183 (227)
T cd08594 149 --------------------------------------------WQVSSFSETRAHQIV-QQKAAQFLRFNQRQLSRIYP 183 (227)
T ss_pred --------------------------------------------ceeccccHHHHHHHH-HHHHHHHHHhcccccceeCC
Confidence 156899999999999 88899999999999999999
Q ss_pred CCCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 427 KGLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 427 ~g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 184 ~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~N 227 (227)
T cd08594 184 SAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRAKFRAN 227 (227)
T ss_pred CCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcccccCC
Confidence 99999999999999999999999999999999999999999987
No 24
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=1.9e-105 Score=805.51 Aligned_cols=260 Identities=35% Similarity=0.539 Sum_probs=229.9
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||+ +|+|||+||+|+|++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~--~gepvV~Hg~tlts~i~f~dv~~~ 78 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGP--NGEPVIYHGHTLTSKISFRSVIEA 78 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCC--CCCEEEEeCCccccceEHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++..+....||||++||||||||+|+++...
T Consensus 79 I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~~~------ 152 (260)
T cd08597 79 INEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKRRK------ 152 (260)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCccc------
Confidence 99999999999999999999999999999999999999999998755556789999999999999999852110
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 153 -------------------------------------------------------------------------------- 152 (260)
T cd08597 153 -------------------------------------------------------------------------------- 152 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
+ ++++++|+.|..+..+.++..... .....+++||||+++.+++ ++++.+|++||++||+||||+
T Consensus 153 -----------~--~~els~l~~~~~~~~~~~~~~~~~-~~~~~~~~S~sE~~~~~~~-~~~~~~~v~~n~~~l~RvYP~ 217 (260)
T cd08597 153 -----------L--CKELSDLVSLCKSVRFQDFPTSAQ-NQKYWEVCSFSENLARRLA-NEFPEDFVNYNKKFLSRVYPS 217 (260)
T ss_pred -----------c--cHHHHhhhhhhcCcccCCcccccc-ccCcccccccCHHHHHHHH-HHCHHHHHHHhhhcCceeCcC
Confidence 0 233444444433322222322111 1224578999999999999 889999999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 218 G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~F~~N 260 (260)
T cd08597 218 PMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGKFLEN 260 (260)
T ss_pred CCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhcccccCC
Confidence 9999999999999999999999999999999999999999987
No 25
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.6e-104 Score=779.14 Aligned_cols=228 Identities=36% Similarity=0.615 Sum_probs=212.1
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +|||||+||+|||++|+|+|||+|
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~--dgePvV~Hg~tlts~i~f~dv~~~ 78 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVIYHGHTLTTKIKFSDVLHT 78 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCC--CCCEEEEeCCcCCCceEHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+||||||||||||++||.+||+||+++|||+||+++.......||||++||||||||+|+..
T Consensus 79 I~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~--------- 149 (229)
T cd08627 79 IKEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY--------- 149 (229)
T ss_pred HHHhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc---------
Confidence 99999999999999999999999999999999999999999997744456789999999999999997620
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 150 -------------------------------------------------------------------------------- 149 (229)
T cd08627 150 -------------------------------------------------------------------------------- 149 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
. +++||+|+++.+++.+..+.+|++||++||+||||+
T Consensus 150 --------------~-----------------------------~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~ 186 (229)
T cd08627 150 --------------R-----------------------------DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPK 186 (229)
T ss_pred --------------c-----------------------------ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCC
Confidence 0 125677888888774456789999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRA 469 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~ 469 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||+.
T Consensus 187 G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~ 228 (229)
T cd08627 187 GQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFML 228 (229)
T ss_pred CCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcCcccC
Confidence 999999999999999999999999999999999999999984
No 26
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=2.3e-104 Score=781.34 Aligned_cols=226 Identities=43% Similarity=0.685 Sum_probs=216.6
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||+ +|||+||||+|+|++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~--~~eP~v~HG~t~ts~i~f~dv~~~ 78 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGP--DGEPVVYHGHTLTSKILFKDVIEA 78 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCC--CCCeEEeeCCCCccceEHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998 789999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+|||||||||||+.+||.+||+||+++|||+||+++.......||||++||||||||+|+
T Consensus 79 Ik~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~----------- 147 (226)
T cd08558 79 IKEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK----------- 147 (226)
T ss_pred HHHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC-----------
Confidence 999999999999999999999999999999999999999999988544458999999999999999731
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
.+++||+|+++.+++ ++++.+|++||++||+||||+
T Consensus 148 -------------------------------------------~~~~S~sE~~~~~~~-~~~~~~l~~~n~~~l~RvYP~ 183 (226)
T cd08558 148 -------------------------------------------YHMSSFSETKALKLL-KESPEEFVKYNKRQLSRVYPK 183 (226)
T ss_pred -------------------------------------------ceEeecCHHHHHHHH-HHChHHHHHhcccceeEECcC
Confidence 256899999999999 889999999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 184 g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~n 226 (226)
T cd08558 184 GTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGKFEQN 226 (226)
T ss_pred CCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhcccccCC
Confidence 9999999999999999999999999999999999999999976
No 27
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=4.5e-104 Score=781.71 Aligned_cols=230 Identities=36% Similarity=0.590 Sum_probs=216.8
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
.|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||+ ++||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~--~~ep~V~HG~t~ts~i~f~dv~~~ 78 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGD--DGEPVVTHGYTLTSSVPFRDVCRA 78 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCC--CCCcEEeeCCCCcCceEHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+|||||||||||+.+||.+||+||+++|||+|++++..+....||||++||||||||+|+. .
T Consensus 79 Ik~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~---- 149 (231)
T cd08598 79 IKKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S---- 149 (231)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C----
Confidence 9999999999999999999999999999999999999999999885455578999999999999998751 0
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 150 -------------------------------------------------------------------------------- 149 (231)
T cd08598 150 -------------------------------------------------------------------------------- 149 (231)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
. ...+++||+|+++.+++ ++++.+|++||++||+||||+
T Consensus 150 --------------~--------------------------~~~~~~S~sE~~~~~l~-~~~~~~lv~~n~~~l~RvYP~ 188 (231)
T cd08598 150 --------------K--------------------------TPNHIFSLSERSLLKLL-KDKRAALDKHNRRHLMRVYPS 188 (231)
T ss_pred --------------C--------------------------CCceeeccCHHHHHHHH-HHHHHHHHHHhhhceeeeCCC
Confidence 0 01146999999999999 788999999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCcccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRA 469 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~ 469 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||++
T Consensus 189 g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~ 230 (231)
T cd08598 189 GTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAMFAG 230 (231)
T ss_pred CCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhcccccC
Confidence 999999999999999999999999999999999999999985
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=2.5e-103 Score=774.32 Aligned_cols=229 Identities=38% Similarity=0.629 Sum_probs=216.0
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||+ +|+|||+||+|+|++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~--dgePvV~HG~tlts~i~f~dv~~~ 78 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPIIYHGHTLTSKIKFMDVLKT 78 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCC--CCCEEEEeCCcCCCCcCHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
|++|||++|+||||||||||||.+||.+||+||+++|||+||+++.......||||++||||||||+|++
T Consensus 79 I~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~---------- 148 (229)
T cd08592 79 IKEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL---------- 148 (229)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC----------
Confidence 9999999999999999999999999999999999999999999774545678999999999999998651
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
..+++||+|+++.+++.+.++.+|++||++||+||||+
T Consensus 149 ------------------------------------------~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~ 186 (229)
T cd08592 149 ------------------------------------------FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPK 186 (229)
T ss_pred ------------------------------------------cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCC
Confidence 01346888999999884478899999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 187 g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~N 229 (229)
T cd08592 187 GQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFMLN 229 (229)
T ss_pred CCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcccccCC
Confidence 9999999999999999999999999999999999999999987
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=6.9e-102 Score=765.84 Aligned_cols=228 Identities=60% Similarity=1.028 Sum_probs=215.7
Q ss_pred cCCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLET 187 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~a 187 (632)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||+ ++||+||||+|+||+|+|+|||++
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~--~~ep~V~HG~t~ts~i~f~dvl~~ 78 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGG--RGDICVLHGGTLTKPVKFEDCIKA 78 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCC--CCCeEEEeCCCCcCCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCcccccccC
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDKAKDKENE 267 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 267 (632)
||+|||++|+|||||||||||+.+||.+||++|+++|||+||.|+..+....||||++||||||||+|++
T Consensus 79 I~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~---------- 148 (228)
T cd08599 79 IKENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP---------- 148 (228)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC----------
Confidence 9999999999999999999999999999999999999999999874444478999999999999997531
Q ss_pred CCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCCcccCCCC
Q 042071 268 LPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYSDEEGSTN 347 (632)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (632)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecC
Q 042071 348 ADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPK 427 (632)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~ 427 (632)
.+++||+|+++.+++.+.++.+|++||++||+||||+
T Consensus 149 -------------------------------------------~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~ 185 (228)
T cd08599 149 -------------------------------------------VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPA 185 (228)
T ss_pred -------------------------------------------ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccC
Confidence 1457899999999983378899999999999999999
Q ss_pred CCCCCCCCCCcccccccCceEeeecCCCCCccccccccccccc
Q 042071 428 GLRIDSSNYNPLIAWSHGAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 428 g~Rv~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 186 g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 228 (228)
T cd08599 186 GLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRGKFRAN 228 (228)
T ss_pred CcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcccccCC
Confidence 9999999999999999999999999999999999999999987
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=2e-63 Score=513.95 Aligned_cols=252 Identities=21% Similarity=0.356 Sum_probs=210.7
Q ss_pred cCCCCCccccccccccccccccCCcCC-----CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHH
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLN-----SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLT 182 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~-----g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~ 182 (632)
++||++||+||||++||||||+|+|+. |+++.++|+++|++||||+|||||+|+ +++|+|+||+|+| ++.|+
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~--~~~~~v~HG~~~~-~~~f~ 77 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGK--PEEPIIYHGPTFL-DIFLK 77 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCC--CCCeEEEECCccc-CcCHH
Confidence 589999999999999999999999998 999999999999999999999999998 7899999999999 99999
Q ss_pred HHHHHHhhcccccCCCceEEEeccCCCH--HHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccCcEEEecCCCCCc
Q 042071 183 TCLETIKNYAFDASEYPVVITFEDHLPP--HLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKGKIIISTKPPEDK 260 (632)
Q Consensus 183 dvi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~ 260 (632)
|||++|+++||..++||||||||+||+. +||.+||++|+++||++|+.|+ ......+|||++||||||||+|+....
T Consensus 78 dvl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~-~~~~~~~Psl~~lrgKIll~~r~~~~~ 156 (274)
T cd00137 78 EVIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPP-LKPTVPLPSLEDLRGKILLLNKKNGFS 156 (274)
T ss_pred HHHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCc-cccCCCCCCHHHHhhheeEEeeccCCC
Confidence 9999999999999999999999999998 9999999999999999999976 344578999999999999999875211
Q ss_pred ccccccCCCCCCCCccCCCcccccccccccccccccccCCCCCCCCCCCCccccccCCCCCCccccccccCCCCCCCCCC
Q 042071 261 AKDKENELPKSTSCHVNFPPFMKMFNHTRKKVCGQKAKHQEYPRPSASSSADEAEWGEEVPNLKGIVKTTNGSTNDKDYS 340 (632)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (632)
... + .+...|.. +
T Consensus 157 ~~~---------------------------------~-------------~~~~~~~~-------------------~-- 169 (274)
T cd00137 157 GPT---------------------------------G-------------SSNDTGFV-------------------S-- 169 (274)
T ss_pred CCc---------------------------------c-------------cccccCcC-------------------C--
Confidence 000 0 00000000 0
Q ss_pred cccCCCCCCCCChhhccccccccccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHH---HHHhhhhhHHHHhh
Q 042071 341 DEEGSTNADGDSEKTQQNVVEAPKYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLER---AVTKKYGQDIVRFT 417 (632)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k---~~~~~~~~~~~~~~ 417 (632)
.++.. . .....+++|++|.++.. ....+...+++.||
T Consensus 170 ----------------------~~~~~------~------------~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n 209 (274)
T cd00137 170 ----------------------FEFST------Q------------KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYN 209 (274)
T ss_pred ----------------------ccccc------c------------cCCCceEEeechhhhcchhhHHHHHhHHHHHhcC
Confidence 00000 0 00022467788877743 22144566789999
Q ss_pred hcCeeEEecCCCC---------CCCCCCCccccccc---CceEeeecCCCCCccccccccccccc
Q 042071 418 QSNVLRVYPKGLR---------IDSSNYNPLIAWSH---GAQMVAFNMQGYGRPLWLMHGMFRAN 470 (632)
Q Consensus 418 ~~~l~RvYP~g~R---------v~SSN~~P~~~W~~---G~QmVALN~QT~D~~m~lN~~~F~~N 470 (632)
+++|+|+||+|+| ++||||+|+.+|++ |||||||||||.|++|+||+|+|+.|
T Consensus 210 ~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 210 KNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPAGCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred cceEEEEccCccCCCCcchhhHhhcCccChHHHhccccCCceEEEeeCcCCCccHHHHhhhhccC
Confidence 9999999999999 99999999999999 99999999999999999999999976
No 31
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=8.8e-46 Score=329.69 Aligned_cols=115 Identities=44% Similarity=0.707 Sum_probs=104.9
Q ss_pred ccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccccC
Q 042071 366 RHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWSHG 445 (632)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~~G 445 (632)
++||+|+.+++++++.+.....+ ..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+++|++|
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~-~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G 78 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLL-KKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAG 78 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHH-HHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCC
Confidence 46888988887777776554322 5689999999999999 888899999999999999999999999999999999999
Q ss_pred ceEeeecCCCCCcccccccccccccCccceeecCccc
Q 042071 446 AQMVAFNMQGYGRPLWLMHGMFRANGGCGYVKKPEFL 482 (632)
Q Consensus 446 ~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~l 482 (632)
||||||||||+|++||||+|||+.||+|||||||++|
T Consensus 79 ~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 79 CQMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred ceEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 9999999999999999999999999999999999986
No 32
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=3.8e-46 Score=334.62 Aligned_cols=118 Identities=39% Similarity=0.646 Sum_probs=89.2
Q ss_pred ccccceeeeccccCCCchhhhhcccCceEEeeccHHHHHHHHHhhhhhHHHHhhhcCeeEEecCCCCCCCCCCCcccccc
Q 042071 364 KYRHLISMHAGKPKGGLKEWLKVEVDRVRRLSLSELQLERAVTKKYGQDIVRFTQSNVLRVYPKGLRIDSSNYNPLIAWS 443 (632)
Q Consensus 364 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~~l~RvYP~g~Rv~SSN~~P~~~W~ 443 (632)
||++|++|..+..+.++...-.. ....+++||||+++.+++ ++++.+|++||++||+||||+|+|||||||||++||+
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~-~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~ 78 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLV-KEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWN 78 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHH-HHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHH-HHccchHHHhcccceEEecCCccccCCCCCChHHHhh
Confidence 57899988776665555543222 125688999999999999 8889999999999999999999999999999999999
Q ss_pred cCceEeeecCCCCCcccccccccccccCccceeecCcccc
Q 042071 444 HGAQMVAFNMQGYGRPLWLMHGMFRANGGCGYVKKPEFLL 483 (632)
Q Consensus 444 ~G~QmVALN~QT~D~~m~lN~~~F~~NG~cGYVLKP~~lr 483 (632)
+|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 79 ~G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 79 CGCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp TT-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred ccCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 9999999999999999999999999999999999999997
No 33
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.4e-41 Score=313.83 Aligned_cols=135 Identities=41% Similarity=0.724 Sum_probs=129.8
Q ss_pred CCCCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHH
Q 042071 109 QDMKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETI 188 (632)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI 188 (632)
|||++||+||||++||||||+|+|+.|+++..+|+++|.+||||+|||||+++ +++|+|+||+|+++.++|+|||++|
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~--~~~~~v~Hg~~~~~~~~~~dvL~~i 78 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGP--DGEPVIYHGHTFTLPIKLSEVLEAI 78 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCC--CCCEEEEECCcccccEEHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999998 7899999999999999999999999
Q ss_pred hhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhh
Q 042071 189 KNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPES 245 (632)
Q Consensus 189 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~ 245 (632)
+++||..+.|||||+||+||+.++|.+||++|+++||++|+.|+.......+|||+|
T Consensus 79 ~~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 79 KDFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999999885545678999985
No 34
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=1.3e-37 Score=293.24 Aligned_cols=144 Identities=28% Similarity=0.537 Sum_probs=129.8
Q ss_pred CCCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHhh
Q 042071 111 MKAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKN 190 (632)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~ 190 (632)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||+++ +++|.||||+++++.++|+|||++|++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~--~~~~~v~Hg~~~~~~~~~~dvL~~i~~ 78 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGN--DGELVVYHGITSTSGITFEDVLNDIRD 78 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEET--TSSEEEEETTSEE-EEEHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCC--CCceEEEeCCEeeeeEeHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999998 667999999999999999999999999
Q ss_pred cccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCC--cCCCCCCChhhccCcEEEecCC
Q 042071 191 YAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDS--ECLKEFPSPESLKGKIIISTKP 256 (632)
Q Consensus 191 ~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~--~~~~~lPSP~~Lk~KILIK~K~ 256 (632)
++|..+.+||||+|++||+.++|..+|++|+++||++|+.++.. .....+|+|++|||||||..||
T Consensus 79 fl~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 79 FLFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp HTTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HHhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 99999999999999999999999999999999999999987743 2467899999999999999875
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.86 E-value=1.6e-21 Score=202.82 Aligned_cols=148 Identities=27% Similarity=0.478 Sum_probs=128.5
Q ss_pred CCCCCccccccccccccccccC------------CcC--CCCCChHHHHHHHhCCCcEEEEeecCCCC------------
Q 042071 109 QDMKAPLSHYFIYTGHNSYLTG------------NQL--NSKCSAGPIKDALKRGLRGIELDLWPSSK------------ 162 (632)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~SS~e~Y~~aL~~GCRcvElDcWdG~~------------ 162 (632)
.+.+.||+||+|-.|||+|..| +|+ ....+-.....+|..|+|-+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 4678999999999999999998 776 34556667789999999999999997551
Q ss_pred ------CCCCceEEecccc---cccccHHHHHHHHhhcccc-cCCCceEEEeccCCCH------------HHHHHHHHHH
Q 042071 163 ------KKDGVEVCHGGTL---TAPVDLTTCLETIKNYAFD-ASEYPVVITFEDHLPP------------HLQGEVAALL 220 (632)
Q Consensus 163 ------~~~ePiV~HG~Tl---Ts~i~f~dvi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~mA~il 220 (632)
..++-.|+|+.++ |+...|.+||..||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 0245789999998 9999999999999999997 8999999999999987 7899999999
Q ss_pred HHHhcc-ccCCCCCC----cCC------CCCCChhhccCcEEEecCC
Q 042071 221 TRIFDK-EILLPDDS----ECL------KEFPSPESLKGKIIISTKP 256 (632)
Q Consensus 221 ~~ifGd-~L~~~~~~----~~~------~~lPSP~~Lk~KILIK~K~ 256 (632)
+++||+ +|++|+.. ..+ ..+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 99999841 122 6899999999999999875
No 36
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.78 E-value=5.3e-19 Score=182.03 Aligned_cols=144 Identities=27% Similarity=0.378 Sum_probs=122.5
Q ss_pred cCCCCCccccccccccccccccCCcCC----------CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccc
Q 042071 108 HQDMKAPLSHYFIYTGHNSYLTGNQLN----------SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTA 177 (632)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~----------g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs 177 (632)
..||+.||++|+|-.|||+|..+..-. +..-.-.+...|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~---~~l~v~Hg~~~~~ 79 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT---GDLRLCHGGDHGY 79 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC---CCEEEEccCcccc
Confidence 369999999999999999999876532 233334578999999999999999875 7899999987654
Q ss_pred -------cccHHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcC---CCCCCChhhcc
Q 042071 178 -------PVDLTTCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSEC---LKEFPSPESLK 247 (632)
Q Consensus 178 -------~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~---~~~lPSP~~Lk 247 (632)
...|++|++.|+++++....++|||.||+|++..++..+.++|+++||++|+.|..... ....|+.++|+
T Consensus 80 ~~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~ 159 (267)
T cd08590 80 LGVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDML 159 (267)
T ss_pred ccccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHH
Confidence 56899999999999999999999999999999988889999999999999998874332 46789999996
Q ss_pred --CcEEEec
Q 042071 248 --GKIIIST 254 (632)
Q Consensus 248 --~KILIK~ 254 (632)
||.||--
T Consensus 160 ~~GkrViv~ 168 (267)
T cd08590 160 NSGKQVVLA 168 (267)
T ss_pred hCCCEEEEE
Confidence 8877764
No 37
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.71 E-value=7.7e-17 Score=146.72 Aligned_cols=105 Identities=20% Similarity=0.290 Sum_probs=84.6
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---CCccEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---PELALLR 580 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---pela~Lr 580 (632)
+|+|+|++|++|+.. + .+.+||||+|.+.|...+...++++|+++++++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 389999999999741 2 26789999999987332332235789999999999999999999974 3457899
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc---eEEEcc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI---RAVPLH 616 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~ 616 (632)
|.|+|+| ..+++++||++.+||+++..+- .|+||.
T Consensus 74 ~~V~D~d-~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYC-FARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEec-ccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 9999998 6777999999999999998763 567774
No 38
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.69 E-value=2e-16 Score=144.86 Aligned_cols=116 Identities=42% Similarity=0.665 Sum_probs=97.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCC-CCCCCccccCCCCCCC-CCccCcEEEEEEEcCCccEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPG-DTSSMTDQTEPIKDSW-VPAWNKEFKFQLTVPELALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~-d~~~~k~kTkvi~nn~-nP~WNEtf~F~v~~pela~Lr 580 (632)
..|+|+|++|++|+... .+..+.+||||+|.+.+.+. +.. +.||+++.++. ||.|||+|.|.+..++.++|+
T Consensus 2 ~~l~v~vi~a~~L~~~~----~~~~~~~dpyv~v~l~~~~~~~~~--~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~ 75 (128)
T cd00275 2 LTLTIKIISGQQLPKPK----GDKGSIVDPYVEVEIHGLPADDSA--KFKTKVVKNNGFNPVWNETFEFDVTVPELAFLR 75 (128)
T ss_pred eEEEEEEEeeecCCCCC----CCCCCccCCEEEEEEEeCCCCCCC--cEeeeeecCCCcCCccCCcEEEEEeCCCeEEEE
Confidence 46999999999997421 01345679999999987654 333 78999988875 999999999999988888999
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCccCCc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEYKKR 626 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~~~~ 626 (632)
|.|||++ .. ++++||++.++|+.|..|||+++|++..|++...+
T Consensus 76 ~~V~d~~-~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~ 119 (128)
T cd00275 76 FVVYDED-SG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELS 119 (128)
T ss_pred EEEEeCC-CC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcce
Confidence 9999998 55 78999999999999999999999999999865443
No 39
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.62 E-value=1.1e-15 Score=158.00 Aligned_cols=144 Identities=25% Similarity=0.296 Sum_probs=124.3
Q ss_pred CCCCccccccccccccccccCCcCC-------CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHH
Q 042071 110 DMKAPLSHYFIYTGHNSYLTGNQLN-------SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLT 182 (632)
Q Consensus 110 DM~~PLs~YfI~SSHNTYL~g~Ql~-------g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~ 182 (632)
+.+.||++|.|-.|||+|..+.... +...-..+...|..|+|++|||||... .+++..|+||.......+|.
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~-~~~~~~~~H~~~~~~~~~~~ 82 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDP-DDGDLYVCHGLFLLNGQTLE 82 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeec-CCCcEEEEccccccCcccHH
Confidence 5789999999999999998876642 233344567999999999999999875 25789999998877789999
Q ss_pred HHHHHHhhcccccCCCceEEEeccCCCHHH---HHHHHHHHHHHhccccCCCCCCcCCCCCCChhhcc-CcEEEecCC
Q 042071 183 TCLETIKNYAFDASEYPVVITFEDHLPPHL---QGEVAALLTRIFDKEILLPDDSECLKEFPSPESLK-GKIIISTKP 256 (632)
Q Consensus 183 dvi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk-~KILIK~K~ 256 (632)
||++.|+++.......+|||+||.+++... +..++++|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 83 ~vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 83 DVLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP--VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc--cccCCCCcHHHHhcCCeEEEEEC
Confidence 999999999999989999999999999875 89999999999999999875 2235789999999 999998754
No 40
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.60 E-value=2.6e-15 Score=135.54 Aligned_cols=99 Identities=18% Similarity=0.216 Sum_probs=81.7
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
...|+|+|+.|++|+. .+.+||||+|.+.. .+.. .+++|++++++.||+|||+|.|.|...++ ..|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~--~~k~-~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL 80 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSV--SEGQ-KEAQTALKKLALHTQWEEELVFPLPEEESLDGTL 80 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcC--CcCc-cEEEcceecCCCCCccccEEEEeCCHHHhCCcEE
Confidence 3569999999999862 13479999999953 2221 27899999999999999999999987666 579
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCccc--CCCceEE
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSEL--RQGIRAV 613 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L--~~GyR~i 613 (632)
.|.|||+| ..+++++||++.+|++++ ..|.+|+
T Consensus 81 ~~~V~d~D-rfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 81 TLTLRCCD-RFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEEEeCC-CCCCCceEEEEEEccccccCCccccch
Confidence 99999999 889999999999999975 6677654
No 41
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.59 E-value=9.4e-15 Score=133.55 Aligned_cols=97 Identities=24% Similarity=0.415 Sum_probs=80.7
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEE-Ec--CCccEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQL-TV--PELALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v-~~--pela~L 579 (632)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.+.. ++||++++++.||+|||+|.|.+ .. .....|
T Consensus 13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~--~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L 83 (122)
T cd08381 13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTT--KRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVL 83 (122)
T ss_pred CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCC--ceeCCccCCCCCCCcccEEEEecCChHHhCCCEE
Confidence 469999999999974 23 45689999999976544444 78999999999999999999987 32 234689
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
+|.|||+| ..+++++||++.+||+.+..+
T Consensus 84 ~~~V~d~d-~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 84 QVSVWSHD-SLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEEEeCC-CCcCCcEEEEEEEeccccccC
Confidence 99999999 677899999999999998755
No 42
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.58 E-value=1.2e-14 Score=131.96 Aligned_cols=102 Identities=26% Similarity=0.461 Sum_probs=84.9
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+. .+..+.+||||+|.+.+.+ .. ++||++++++.||+|||+|.|.+..+....|+|.||
T Consensus 2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~--~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~ 71 (119)
T cd04036 2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DE--KKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVM 71 (119)
T ss_pred eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--Cc--cCccceecCCCCCccceEEEEEeCcccCCEEEEEEE
Confidence 7899999999974 2334678999999986432 22 689999999999999999999987765678999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCCce---EEEccCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQGIR---AVPLHDR 618 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~GyR---~ipL~d~ 618 (632)
|+| .. ++++||++.+||+.|..|.+ +++|.+.
T Consensus 72 d~d-~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~ 106 (119)
T cd04036 72 DED-YV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ 106 (119)
T ss_pred ECC-CC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC
Confidence 998 55 79999999999999998864 6787664
No 43
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.57 E-value=1.3e-14 Score=133.17 Aligned_cols=103 Identities=24% Similarity=0.421 Sum_probs=85.8
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc-----CCccEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV-----PELALL 579 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~-----pela~L 579 (632)
++|+|++|++|+. .+..+.+||||+|.+.+ . ++||++++++.||+|||+|.|.+.. +....|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~--~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l 67 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----E--KYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATL 67 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----e--eeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEE
Confidence 4799999999973 23446689999999853 2 6799999999999999999999876 345789
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccC--CC---ceEEEccCCCCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELR--QG---IRAVPLHDRKGN 621 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~--~G---yR~ipL~d~~g~ 621 (632)
.|.|||++ ..+++++||++.+||+.+. .| .+|.+|.+..|+
T Consensus 68 ~~~v~d~~-~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~ 113 (126)
T cd08682 68 QLTVMHRN-LLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGK 113 (126)
T ss_pred EEEEEEcc-ccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCC
Confidence 99999998 6778999999999999987 45 588999887664
No 44
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.57 E-value=6.4e-15 Score=137.19 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=88.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|+.|++|+. .+..+.+||||+|.+.+...... ++||++++++.||+|||+|.|.|...++ ..|+
T Consensus 15 ~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~--k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~ 86 (136)
T cd08406 15 ERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKIS--KKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLR 86 (136)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCcccc--ccCCccccCCCCCeeceeEEEECCHHHhCCcEEE
Confidence 469999999999974 23346789999999975433333 6799999999999999999999876554 6799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCceEE-EccCCCCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGIRAV-PLHDRKGN 621 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~i-pL~d~~g~ 621 (632)
|.|+|+| ..+++++||++.|+..+..+|++|. .|++.-+.
T Consensus 87 ~~V~~~d-~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~ 127 (136)
T cd08406 87 VTVAEST-EDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRK 127 (136)
T ss_pred EEEEeCC-CCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCC
Confidence 9999999 7788999999999998888888774 34444343
No 45
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.57 E-value=2e-14 Score=132.06 Aligned_cols=107 Identities=21% Similarity=0.305 Sum_probs=86.9
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|.|+|++|++++.. ...+..+.+||||.|.+.+. +.||++++++.||+|||+|.|.+..++ ..|.|.||
T Consensus 2 L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~~-------~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~ 70 (126)
T cd08379 2 LEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGPK-------WVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVF 70 (126)
T ss_pred eEEEEEEeECCccc---cccccCCCCCeeEEEEECCE-------EeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEE
Confidence 89999999994221 12345577899999997431 679999999999999999999997655 48999999
Q ss_pred eccCCC------CCCCccEEEEEeCcccCCCc---eEEEccCCCCCcc
Q 042071 585 ERDDIL------QKDDFGGQTCLPVSELRQGI---RAVPLHDRKGNEY 623 (632)
Q Consensus 585 D~d~~~------~~ddflGq~~lpL~~L~~Gy---R~ipL~d~~g~~~ 623 (632)
|++ .. .++++||++.+||..+..|- +++||.+..+...
T Consensus 71 d~d-~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~ 117 (126)
T cd08379 71 DNS-QSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGV 117 (126)
T ss_pred ECC-CccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCc
Confidence 998 44 37999999999999999885 4899998776554
No 46
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.56 E-value=3.5e-14 Score=134.04 Aligned_cols=113 Identities=20% Similarity=0.244 Sum_probs=90.3
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc----------
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---------- 573 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---------- 573 (632)
+|+|+|+.|++|+. ..+.+||||+|.+.+...... ++||+++++++||+|||+|.|.+..
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~--~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~ 70 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQD--TKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFE 70 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCc--ccCCccEeCCCCCccceEEEEEEeccccccccccc
Confidence 38999999999973 235689999999987543333 7899999999999999999999851
Q ss_pred -C--C--ccEEEEEEEeccCCCCCCCccEEEEEeCcccCCC----ceEEEccCCCCCccCCcc
Q 042071 574 -P--E--LALLRIEIHERDDILQKDDFGGQTCLPVSELRQG----IRAVPLHDRKGNEYKKRE 627 (632)
Q Consensus 574 -p--e--la~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G----yR~ipL~d~~g~~~~~~~ 627 (632)
| + ...|.|.|||++ ..++++|||++.|||..|..+ -.|.+|.+......++.+
T Consensus 71 ~~~~~~~~~~L~i~V~d~~-~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~~~~~~ 132 (148)
T cd04010 71 MPEEDAEKLELRVDLWHAS-MGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKSTPPGT 132 (148)
T ss_pred CCcccccEEEEEEEEEcCC-CCCCCceeEEEEEecccccccCCcCcceeecCCcccccCCCCC
Confidence 1 2 357999999998 667899999999999999876 368899887766544443
No 47
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.55 E-value=2.8e-14 Score=130.95 Aligned_cols=107 Identities=18% Similarity=0.286 Sum_probs=84.3
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
...|.|+|++|++|+... ...+.+||||+|.+........ ++||++++++.||+|||+|.|.+...++ ..|
T Consensus 14 ~~~L~V~Vi~a~~L~~~~-----~~~~~~DpyVkv~l~p~~~~~~--~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L 86 (125)
T cd04029 14 TQSLNVHVKECRNLAYGD-----EAKKRSNPYVKTYLLPDKSRQS--KRKTSIKRNTTNPVYNETLKYSISHSQLETRTL 86 (125)
T ss_pred CCeEEEEEEEecCCCccC-----CCCCCCCcEEEEEEEcCCcccc--ceEeeeeeCCCCCcccceEEEECCHHHhCCCEE
Confidence 356999999999997421 1235689999999964322222 6899999999999999999999876544 479
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCC---CceEEEcc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQ---GIRAVPLH 616 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~---GyR~ipL~ 616 (632)
.|.|||+| ..+++++||++.++|.++.. +-+|+||.
T Consensus 87 ~~~V~d~~-~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 87 QLSVWHYD-RFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEEEECC-CCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 99999999 77889999999999999854 35677773
No 48
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.54 E-value=3.7e-14 Score=130.12 Aligned_cols=98 Identities=18% Similarity=0.302 Sum_probs=80.1
Q ss_pred eEEEEEEEecccccccCCCcccCCC-CCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDAC-SPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~-s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
..|.|+|+.|++|+.. +.. +.+||||+|.+.+.+.... ++||++++++.||+|||+|.|.+...++ ..|
T Consensus 15 ~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~--~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L 86 (125)
T cd08393 15 RELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRG--KRKTSVKKKTLNPVFNETLRYKVEREELPTRVL 86 (125)
T ss_pred CEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccc--cccCccCcCCCCCccCceEEEECCHHHhCCCEE
Confidence 4699999999999742 222 4679999999975443333 6899999999999999999999875444 489
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
+|.|||+| ..+++++||++.+||..+..+
T Consensus 87 ~~~V~d~~-~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 87 NLSVWHRD-SLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EEEEEeCC-CCCCCcEeEEEEEecCccccC
Confidence 99999998 678899999999999998544
No 49
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.54 E-value=5.5e-14 Score=128.24 Aligned_cols=104 Identities=17% Similarity=0.278 Sum_probs=85.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCC-CCCCccCcEEEEEEEcCCccEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKD-SWVPAWNKEFKFQLTVPELALLRI 581 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~n-n~nP~WNEtf~F~v~~pela~Lrf 581 (632)
.+|.|+|++|++++. .+ ++.+||||+|.+.+. +.||+++.+ +.||+|||+|.|.+... ...|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~~-------~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~ 66 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGHA-------VYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYI 66 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECCE-------EEEeEEccCCCCCCccCeEEEEEecCC-CcEEEE
Confidence 369999999997652 23 467899999999542 679999877 58999999999998754 356999
Q ss_pred EEEeccCCCCCCCccEEEEEeCc-ccCCCc---eEEEccCCCCCc
Q 042071 582 EIHERDDILQKDDFGGQTCLPVS-ELRQGI---RAVPLHDRKGNE 622 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~-~L~~Gy---R~ipL~d~~g~~ 622 (632)
+|||+| ..++|++||.+.+||. .+.+|- .|++|...+|.+
T Consensus 67 ~V~d~d-~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~ 110 (121)
T cd04016 67 EIFDER-AFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGED 110 (121)
T ss_pred EEEeCC-CCcCCceEEEEEEECchhccCCCCccccEeCcCccCCC
Confidence 999999 7888999999999996 677774 688998877765
No 50
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.53 E-value=9.3e-14 Score=130.65 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=85.3
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|.|+|+.|++|+.. .+..+.+||||+|.+.+..... .++||++++++.||+|||+|.|.+. ..-..|.|.
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~--~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~ 100 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCI--AKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVI 100 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccc--cceeceecCCCCCCccCCeEEEEEc-CCCCEEEEE
Confidence 4699999999999731 1223568999999997533322 3789999999999999999999998 445689999
Q ss_pred EE-eccCCCCCCCccEEEEEeCcccCCCc---eEEEccCCC
Q 042071 583 IH-ERDDILQKDDFGGQTCLPVSELRQGI---RAVPLHDRK 619 (632)
Q Consensus 583 V~-D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d~~ 619 (632)
|| |++ ...+++|||++.|+|+.+..+. .|.+|.++.
T Consensus 101 V~~d~~-~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 101 VWGDYG-RMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred EEeCCC-CCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 99 566 6778999999999999996553 566887654
No 51
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.53 E-value=5.5e-14 Score=133.13 Aligned_cols=102 Identities=23% Similarity=0.372 Sum_probs=86.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCC-CCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKD-SWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~n-n~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
|+|+|++|++|+. .+..+.+||||+|.+.+ . +.+|+++.+ +.||+|||+|.|.+..+....|.|.|
T Consensus 2 L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~--~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V 68 (150)
T cd04019 2 LRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----Q--VLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSV 68 (150)
T ss_pred EEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----E--EeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEE
Confidence 8899999999973 24456789999999964 2 678998877 59999999999998766567899999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC-------ceEEEccCCCC
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG-------IRAVPLHDRKG 620 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G-------yR~ipL~d~~g 620 (632)
+|++ ..+++++||++.+||+.+..| -+|+||.+..|
T Consensus 69 ~d~~-~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~ 111 (150)
T cd04019 69 EDRV-GPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGG 111 (150)
T ss_pred EEec-CCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCC
Confidence 9998 666799999999999998654 58999999876
No 52
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.53 E-value=6.5e-14 Score=129.14 Aligned_cols=104 Identities=19% Similarity=0.268 Sum_probs=83.3
Q ss_pred eEEEEEEEecccccccCCCcccCC-CCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDA-CSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~-~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
..|.|+|+.|++|+.. +. .+.+||||+|.+........ ++||++++++.||+|||+|.|.+...++ ..|
T Consensus 15 ~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~--k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L 86 (128)
T cd08392 15 SCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNS--KRKTAVKKGTVNPVFNETLKYVVEADLLSSRQL 86 (128)
T ss_pred CEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccc--eeecccccCCCCCccceEEEEEcCHHHhCCcEE
Confidence 4699999999999742 22 25689999999975443333 7899999999999999999999876554 489
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCC------ceEEEc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQG------IRAVPL 615 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~G------yR~ipL 615 (632)
.|.|||.+ ..+++++||++.|||..+.-. -+|.||
T Consensus 87 ~v~V~~~~-~~~~~~~lG~~~i~L~~~~~~~~~~~~~~W~~l 127 (128)
T cd08392 87 QVSVWHSR-TLKRRVFLGEVLIPLADWDFEDTDSQRFLWYPL 127 (128)
T ss_pred EEEEEeCC-CCcCcceEEEEEEEcCCcccCCCCccccceEEC
Confidence 99999998 677899999999999988532 356555
No 53
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.52 E-value=7.4e-14 Score=127.10 Aligned_cols=103 Identities=22% Similarity=0.357 Sum_probs=86.6
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+. .+..+.+||||+|.+.+ .. .++|+++.++.||+|||+|.|.+..++ ..|.|.||
T Consensus 2 L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~--~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~ 68 (121)
T cd04042 2 LDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KT--VYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVF 68 (121)
T ss_pred eEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EE--EEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEE
Confidence 7899999999973 23456789999999854 12 679999999999999999999987554 67999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCCCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRKGN 621 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~g~ 621 (632)
|++ ..+++++||++.++|..+..| ..+++|.+..+.
T Consensus 69 D~d-~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~ 107 (121)
T cd04042 69 DYD-RGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSD 107 (121)
T ss_pred eCC-CCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCc
Confidence 999 677899999999999999855 468999988864
No 54
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.52 E-value=4.6e-14 Score=126.28 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=78.5
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc-cEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL-ALLRIE 582 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel-a~Lrf~ 582 (632)
.|.|+|++|++|+.... .......+||||+|.+.+ . ++||++++++.||+|||+|.|.+...+. ..|.|.
T Consensus 2 ~l~v~v~~A~~L~~~~~--~~~~~~~~DPYv~v~~~~-----~--~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~ 72 (108)
T cd04039 2 VVFMEIKSITDLPPLKN--MTRTGFDMDPFVIISFGR-----R--VFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFK 72 (108)
T ss_pred EEEEEEEeeeCCCCccc--cCCCCCccCceEEEEECC-----E--eEeeeeecCCCCCcccceEEEEEeCccCCCEEEEE
Confidence 58999999999984211 011123479999999732 2 6799999999999999999999876554 479999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCCc
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQGI 610 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~Gy 610 (632)
|||+| ..+++++||++.++|+.|..||
T Consensus 73 V~D~d-~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 73 VLDKD-KFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred EEECC-CCCCCcceEEEEEEHHHHHhhC
Confidence 99999 7788999999999999998876
No 55
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.52 E-value=4e-14 Score=130.80 Aligned_cols=104 Identities=17% Similarity=0.303 Sum_probs=82.6
Q ss_pred cceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCC-CCccCcEEEEEEEcCCcc-E
Q 042071 501 VKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSW-VPAWNKEFKFQLTVPELA-L 578 (632)
Q Consensus 501 ~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~-nP~WNEtf~F~v~~pela-~ 578 (632)
....|+|+|+.|++|+.. .....+||||+|.+.+.+.+.. |+||++++++. ||+|||+|.|+|..++.. .
T Consensus 12 ~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~--KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~ 83 (135)
T cd08692 12 VNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLY--KKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQ 83 (135)
T ss_pred cCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcce--eecCccEECCCCCceecceEEEeCCchhheeE
Confidence 345699999999999842 1223469999999998766655 89999999995 799999999999876553 5
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccC-CCceEE
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELR-QGIRAV 613 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~-~GyR~i 613 (632)
|.+.|||++ ..+++++||++.++.++.. .|.+|.
T Consensus 84 l~v~v~d~~-~~~~n~~IG~v~lG~~~~~~~~~~hW 118 (135)
T cd08692 84 FLIKLYSRS-SVRRKHFLGQVWISSDSSSSEAVEQW 118 (135)
T ss_pred EEEEEEeCC-CCcCCceEEEEEECCccCCchhhhhH
Confidence 778889888 6678999999999998753 345554
No 56
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.50 E-value=6.2e-14 Score=125.81 Aligned_cols=102 Identities=21% Similarity=0.217 Sum_probs=83.5
Q ss_pred EEEEEEEecccccccCCCcccCCC-CCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC---ccEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDAC-SPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE---LALL 579 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~-s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe---la~L 579 (632)
.|+|+|++|++|+. .+.. +.+||||+|.+.+.. .. ..+|++++++.||+|||+|.|.+..++ ...|
T Consensus 2 ~L~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~~~--~~--~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l 71 (111)
T cd04041 2 VLVVTIHRATDLPK------ADFGTGSSDPYVTASFAKFG--KP--LYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERL 71 (111)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCCccEEEEEccCC--Cc--cEeeeeECCCCCCccceeEEEEeCchhccCCCEE
Confidence 58999999999974 2333 568999999986431 22 679999999999999999999887653 3589
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEcc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLH 616 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~ 616 (632)
.|.|||+| ..+.+++||++.+++..|..--++.||.
T Consensus 72 ~~~V~d~d-~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 72 SCRLWDSD-RFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEEEeCC-CCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 99999999 7778999999999999998666666664
No 57
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.50 E-value=4.3e-14 Score=131.81 Aligned_cols=112 Identities=17% Similarity=0.174 Sum_probs=85.6
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|+.|++|+... .+....+||||+|.+....... .++||++++++.||+|||+|.|.|...++ ..|.
T Consensus 15 ~~L~V~V~karnL~~~d----~~~~~~~DpYVKv~l~~~~~k~--~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~ 88 (138)
T cd08407 15 NRLLVVVIKAKNLHSDQ----LKLLLGIDVSVKVTLKHQNAKL--KKKQTKRAKHKINPVWNEMIMFELPSELLAASSVE 88 (138)
T ss_pred CeEEEEEEEecCCCccc----cCCCCCCCeEEEEEEEcCCccc--ceeccceeeCCCCCccccEEEEECCHHHhCccEEE
Confidence 46999999999997421 1112337999999997542222 37899999999999999999999886555 5799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCceEE-EccCCCCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGIRAV-PLHDRKGN 621 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~i-pL~d~~g~ 621 (632)
|+|||+| ..+++++||++.+++.+--++.+|. .|++.-++
T Consensus 89 ~~V~d~d-~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~ 129 (138)
T cd08407 89 LEVLNQD-SPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRR 129 (138)
T ss_pred EEEEeCC-CCcCcceeceEEecCcCCCcHHHHHHHHHhCCCC
Confidence 9999999 7889999999999998866665554 44443333
No 58
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.50 E-value=1.4e-13 Score=122.30 Aligned_cols=97 Identities=25% Similarity=0.392 Sum_probs=81.7
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|.|+|++|++|+.. +..+.+||||+|.+.+ . ++||++++++.||+|||+|.|.+..++...|.|.|+
T Consensus 2 L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~--~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~ 68 (105)
T cd04050 2 LFVYLDSAKNLPLA------KSTKEPSPYVELTVGK-----T--TQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVK 68 (105)
T ss_pred EEEEEeeecCCCCc------ccCCCCCcEEEEEECC-----E--EEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEE
Confidence 78999999999842 2345689999999965 2 689999999999999999999999888889999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC-----ceEEEccCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG-----IRAVPLHDR 618 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G-----yR~ipL~d~ 618 (632)
|++ . +++||++.++|..|..+ -++.+|.+.
T Consensus 69 d~~-~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~~ 103 (105)
T cd04050 69 DDK-T---GKSLGSLTLPLSELLKEPDLTLDQPFPLDNS 103 (105)
T ss_pred ECC-C---CCccEEEEEEHHHhhccccceeeeeEecCCC
Confidence 988 2 78999999999998643 367788653
No 59
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.49 E-value=4.8e-14 Score=131.15 Aligned_cols=112 Identities=20% Similarity=0.231 Sum_probs=88.8
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+...... +.||++++++.||+|||+|.|.+...++ ..|.
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~--~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~ 86 (136)
T cd08404 15 NRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRIS--KKKTHVKKCTLNPVFNESFVFDIPSEELEDISVE 86 (136)
T ss_pred CeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceee--eEcCccccCCCCCccCceEEEECCHHHhCCCEEE
Confidence 469999999999974 23456789999999965322222 6799999999999999999999875443 4689
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCceEE-EccCCCCCcc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGIRAV-PLHDRKGNEY 623 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~i-pL~d~~g~~~ 623 (632)
|.|||+| ..+++++||++.+++.+...|.+|+ .|.+..|+++
T Consensus 87 ~~v~d~d-~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 87 FLVLDSD-RVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEEECC-CCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999999 6788999999999999976677665 5566667654
No 60
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.49 E-value=2.8e-13 Score=123.65 Aligned_cols=105 Identities=21% Similarity=0.306 Sum_probs=81.5
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc-CC--ccE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV-PE--LAL 578 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~-pe--la~ 578 (632)
...|+|+|++|++|+. .+..+.+||||+|.+.+...+.. ++||++++++.||+|||+|.|.+.. .+ ...
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~--~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~ 86 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKS--KRRTKTVKKTLNPEWNQTFEYSNVRRETLKERT 86 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccc--cccccccCCCCCCccccEEEEcccCHHHhCCCE
Confidence 3569999999999974 23346689999999976433333 7899999999999999999998644 22 368
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccC--CCceEEEc
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELR--QGIRAVPL 615 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~--~GyR~ipL 615 (632)
|+|.|||++ ..+++++||++.++|+... .+-.|.||
T Consensus 87 l~~~V~d~~-~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 87 LEVTVWDYD-RDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEEEeCC-CCCCCcEeeEEEEecccccccCCcceEEC
Confidence 999999998 6678999999999999732 22345555
No 61
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.48 E-value=1.7e-14 Score=122.73 Aligned_cols=81 Identities=33% Similarity=0.534 Sum_probs=67.9
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCCCCCCC
Q 042071 22 AIESLFNQYSEN-GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLSEKNSP 100 (632)
Q Consensus 22 ei~~if~~~~~~-~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s~~n~~ 100 (632)
||..||.+|+++ ..||.++|++||+++|++..++.++|++||++|++....+ .+..||++||++||+|++|++
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~------~~~~lt~~gF~~fL~S~~N~~ 74 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNR------QKGQLTLEGFTRFLFSDENSI 74 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHH------CTTEEEHHHHHHHHHSTTCBS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhc------ccCCcCHHHHHHHHCCCcCCC
Confidence 799999999986 8999999999999999998889999999999999754322 257899999999999999999
Q ss_pred CCCC-CCcc
Q 042071 101 LCPS-RGVH 108 (632)
Q Consensus 101 ~~~~-~~v~ 108 (632)
++|. ..||
T Consensus 75 ~~~~~~~Vy 83 (83)
T PF09279_consen 75 FDPEHLQVY 83 (83)
T ss_dssp S-HHHHSS-
T ss_pred CChHhCCcC
Confidence 9753 3443
No 62
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.48 E-value=1.3e-13 Score=123.63 Aligned_cols=101 Identities=23% Similarity=0.345 Sum_probs=83.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCcc-CcEEEEEEEcCCc--cEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAW-NKEFKFQLTVPEL--ALLRI 581 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~W-NEtf~F~v~~pel--a~Lrf 581 (632)
|+|+|++|++|+... ...+.+||||+|.+.+ . ++||++++++.||+| ||+|.|.+..+++ ..|.|
T Consensus 1 l~V~v~~a~~L~~~d-----~~~~~~Dpyv~v~~~~-----~--~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i 68 (110)
T cd08688 1 LKVRVVAARDLPVMD-----RSSDLTDAFVEVKFGS-----T--TYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQI 68 (110)
T ss_pred CEEEEEEEECCCccc-----cCCCCCCceEEEEECC-----e--eEecceecCCCCCcccCcEEEEEcChHHcCCCeEEE
Confidence 579999999997421 0235679999999853 2 789999999999999 9999999987654 58999
Q ss_pred EEEeccCCCCCCCccEEEEEeCcccCC---Cc---eEEEccCC
Q 042071 582 EIHERDDILQKDDFGGQTCLPVSELRQ---GI---RAVPLHDR 618 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~~L~~---Gy---R~ipL~d~ 618 (632)
.|||++ ..+++++||++.++|..|.. +. +|.+|+|.
T Consensus 69 ~V~d~d-~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~~ 110 (110)
T cd08688 69 RVMDHD-TYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYDT 110 (110)
T ss_pred EEEeCC-CCCCCCceEEEEEeHHHhcccCCccccCCeEEcccC
Confidence 999999 77789999999999999976 33 58888873
No 63
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.48 E-value=2.6e-13 Score=129.69 Aligned_cols=120 Identities=24% Similarity=0.373 Sum_probs=96.0
Q ss_pred eEEEEEEEecccccccCCC----------------cc--------cCCCCCCCceeEEEEecCCCCCCCCccccCCCCCC
Q 042071 503 TTLKVTLYSGEGWDKEFHH----------------TY--------FDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDS 558 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~----------------~~--------~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn 558 (632)
.+|.|+|+.|++|+..... .. ....+.+||||+|.+.+. . ..||++++++
T Consensus 7 G~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~--~~rT~v~~~~ 80 (158)
T cd04015 7 GTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----R--VARTRVIENS 80 (158)
T ss_pred eeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----E--eeEEEEeCCC
Confidence 5699999999999853210 00 023456899999998652 1 4699999999
Q ss_pred CCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCc---eEEEccCCCCCccCCcccccc
Q 042071 559 WVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGI---RAVPLHDRKGNEYKKREASHV 631 (632)
Q Consensus 559 ~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d~~g~~~~~~~~~~~ 631 (632)
.||+|||+|.|.+..+. ..|.|.|+|+| .. .+++||++.+|++.+..|. ++++|.+..|++..+...+||
T Consensus 81 ~nP~WnE~F~~~~~~~~-~~l~~~V~d~d-~~-~~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v 153 (158)
T cd04015 81 ENPVWNESFHIYCAHYA-SHVEFTVKDND-VV-GAQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRV 153 (158)
T ss_pred CCCccceEEEEEccCCC-CEEEEEEEeCC-Cc-CCcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEE
Confidence 99999999999886543 57999999998 54 4789999999999998875 789999999999988887776
No 64
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.48 E-value=3e-13 Score=124.36 Aligned_cols=93 Identities=29% Similarity=0.328 Sum_probs=77.9
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEE-EcCCccEEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQL-TVPELALLR 580 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v-~~pela~Lr 580 (632)
..+|+|+|++|++|+. +..+.+||||+|.+.+. ++||++++++.||+|||+|.|.. ..+....|+
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~~-------~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~ 92 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGGQ-------EKRTEVIWNNNNPRWNATFDFGSVELSPGGKLR 92 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECCc-------cccCceecCCCCCcCCCEEEEecccCCCCCEEE
Confidence 3579999999999963 23466899999998542 68999999999999999999974 344567899
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
|+|||+| ..+++++||++.++|.....+
T Consensus 93 v~V~D~d-~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 93 FEVWDRD-NGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEEEeCC-CCCCCCeeEEEEEEecCCcee
Confidence 9999999 777899999999999976655
No 65
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.48 E-value=2.6e-13 Score=122.36 Aligned_cols=104 Identities=22% Similarity=0.381 Sum_probs=86.4
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+.. +..+.+||||++.+.+ . +.+|++++++.||.|||+|.|.+..+....|.|.||
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~--~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~ 68 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----E--KYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVW 68 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----E--eEecccccCCCCCceeEEEEEEecCCCCCEEEEEEE
Confidence 78999999999742 2345689999999853 2 689999999999999999999987765678999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCCCCc
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRKGNE 622 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~g~~ 622 (632)
|++ ..+++++||++.++|+.+..+ -.+++|.+..|+.
T Consensus 69 d~~-~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~G~~ 108 (116)
T cd08376 69 DKD-TGKKDEFIGRCEIDLSALPREQTHSLELELEDGEGSL 108 (116)
T ss_pred ECC-CCCCCCeEEEEEEeHHHCCCCCceEEEEEccCCCcEE
Confidence 998 667899999999999998765 3567888776664
No 66
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.47 E-value=2.4e-13 Score=126.66 Aligned_cols=103 Identities=25% Similarity=0.476 Sum_probs=85.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+ . ++||++++++.||.|||+|.|.+..+....|.|.
T Consensus 15 G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~--~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~ 81 (136)
T cd08375 15 GRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----Q--EHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCIT 81 (136)
T ss_pred EEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----E--eeeccccCCCCCCccCceEEEEecCccCCEEEEE
Confidence 579999999999973 23456789999999842 2 6899999999999999999999987767889999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCC------C--ceEEEccCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQ------G--IRAVPLHDRK 619 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~------G--yR~ipL~d~~ 619 (632)
|||+| ..+++++||++.++|.++.. + ++.++|....
T Consensus 82 V~D~d-~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~ 125 (136)
T cd08375 82 VFDRD-FFSPDDFLGRTEIRVADILKETKESKGPITKRLLLHEVP 125 (136)
T ss_pred EEECC-CCCCCCeeEEEEEEHHHhccccccCCCcEEEEecccccc
Confidence 99998 67789999999999999874 2 3567775544
No 67
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.47 E-value=3.1e-13 Score=123.42 Aligned_cols=97 Identities=22% Similarity=0.330 Sum_probs=79.8
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+ .... ++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~--~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~ 85 (124)
T cd08385 16 NQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKK--KFETKVHRKTLNPVFNETFTFKVPYSELGNKTLV 85 (124)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCC--ceecccCcCCCCCceeeeEEEeCCHHHhCCCEEE
Confidence 569999999999973 23345689999999964 2333 6899999999999999999999876544 4799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI 610 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy 610 (632)
|.|||+| ..+++++||++.+||+.+..|.
T Consensus 86 ~~V~d~d-~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 86 FSVYDFD-RFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEEEeCC-CCCCCceeEEEEEecCcccCCC
Confidence 9999998 6778999999999999986553
No 68
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.47 E-value=2.5e-13 Score=128.59 Aligned_cols=96 Identities=24% Similarity=0.376 Sum_probs=77.3
Q ss_pred EEEEEEecccccccCCCc--------ccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc
Q 042071 505 LKVTLYSGEGWDKEFHHT--------YFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL 576 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~--------~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel 576 (632)
|.|+|++|++|+...... ..+..+.+||||+|.+.|. +.||++++++.||+|||+|.|.+..|..
T Consensus 2 ~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g~-------~~kT~v~~~t~nPvWNE~f~f~v~~p~~ 74 (151)
T cd04018 2 FIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAGQ-------KVKTSVKKNSYNPEWNEQIVFPEMFPPL 74 (151)
T ss_pred eEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECCE-------eeecceEcCCCCCCcceEEEEEeeCCCc
Confidence 789999999998532110 0112345799999998763 5689999999999999999999887765
Q ss_pred -cEEEEEEEeccCCCCCCCccEEEEEeCcccCC
Q 042071 577 -ALLRIEIHERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 577 -a~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
..|.|+|||+| ..+++++||++.++|..|..
T Consensus 75 ~~~l~~~v~D~d-~~~~dd~iG~~~l~l~~l~~ 106 (151)
T cd04018 75 CERIKIQIRDWD-RVGNDDVIGTHFIDLSKISN 106 (151)
T ss_pred CCEEEEEEEECC-CCCCCCEEEEEEEeHHHhcc
Confidence 48999999999 67789999999999998753
No 69
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.46 E-value=2.2e-13 Score=123.97 Aligned_cols=97 Identities=13% Similarity=0.222 Sum_probs=77.9
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc-cEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL-ALLRI 581 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel-a~Lrf 581 (632)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.... ++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~--~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v 82 (119)
T cd08685 12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRF--RQKTSTVPDSANPLFHETFSFDVNERDYQKRLLV 82 (119)
T ss_pred CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcc--eEeCccccCCCCCccccEEEEEcChHHhCCEEEE
Confidence 469999999999973 13 35689999999975433333 7799999999999999999999865443 46889
Q ss_pred EEEeccCCCC-CCCccEEEEEeCcccCCC
Q 042071 582 EIHERDDILQ-KDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 582 ~V~D~d~~~~-~ddflGq~~lpL~~L~~G 609 (632)
.|||++ ... ++++||.+.|||.++..|
T Consensus 83 ~V~~~~-~~~~~~~~lG~~~i~l~~~~~~ 110 (119)
T cd08685 83 TVWNKL-SKSRDSGLLGCMSFGVKSIVNQ 110 (119)
T ss_pred EEECCC-CCcCCCEEEEEEEecHHHhccC
Confidence 999988 443 478999999999998655
No 70
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.46 E-value=1.7e-13 Score=125.84 Aligned_cols=101 Identities=18% Similarity=0.344 Sum_probs=82.2
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC-c--cEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE-L--ALLR 580 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe-l--a~Lr 580 (632)
+|+|+|++|++|+. .+..+.+||||+|.+.+. ++||++++++.||+|||+|.|.+..++ + ..|+
T Consensus 1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~~-------~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~ 67 (127)
T cd04022 1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDGQ-------KKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLE 67 (127)
T ss_pred CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECCE-------EecceeEcCCCCCccceEEEEEccCHHHccCCeEE
Confidence 38999999999973 233456899999998642 679999999999999999999987543 2 5799
Q ss_pred EEEEeccCCCC-CCCccEEEEEeCcccC-CC---ceEEEccCC
Q 042071 581 IEIHERDDILQ-KDDFGGQTCLPVSELR-QG---IRAVPLHDR 618 (632)
Q Consensus 581 f~V~D~d~~~~-~ddflGq~~lpL~~L~-~G---yR~ipL~d~ 618 (632)
|.|||++ ... +++|||++.++++.+. .| .++.+|...
T Consensus 68 ~~V~d~~-~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~ 109 (127)
T cd04022 68 VYVYNDR-RSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKR 109 (127)
T ss_pred EEEeeCC-CCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeC
Confidence 9999988 554 7999999999999987 44 567888754
No 71
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.46 E-value=2.7e-13 Score=124.25 Aligned_cols=97 Identities=14% Similarity=0.261 Sum_probs=79.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|.|+|+.|++|+.. +..+.+||||+|.+....... +.++||++++++.||+|||+|.|.|...++ ..|+
T Consensus 14 ~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~-~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~ 86 (124)
T cd08680 14 SSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSST-SCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQ 86 (124)
T ss_pred CEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCC-CceEEcCccCCCCCCccccEEEEECCHHHhhcCEEE
Confidence 4599999999999742 233567999999996432211 137899999999999999999999877665 4899
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
|.||+++ ..+++++||++.++|+.+.
T Consensus 87 ~~V~~~~-~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 87 VDVCSVG-PDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEeCC-CCCceeEEEEEEEEhhhcc
Confidence 9999998 7788999999999999884
No 72
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.46 E-value=1e-13 Score=128.82 Aligned_cols=111 Identities=18% Similarity=0.261 Sum_probs=86.8
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+...... +++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 15 ~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~--~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~ 86 (136)
T cd08402 15 GKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLK--KKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLI 86 (136)
T ss_pred CeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccc--eeeccceeCCCCCcccceEEEECCHHHhCCCEEE
Confidence 469999999999974 23346689999999864322222 6789999999999999999999876554 4799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCceE-EEccCCCCCc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGIRA-VPLHDRKGNE 622 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~-ipL~d~~g~~ 622 (632)
|.|||++ ..+++++||++.+++.+...++.| .+|+...+++
T Consensus 87 ~~v~d~~-~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~ 128 (136)
T cd08402 87 VTVLDYD-RIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRP 128 (136)
T ss_pred EEEEeCC-CCCCCceeEEEEECCccCChHHHHHHHHHhCCCCe
Confidence 9999999 777899999999999988777644 3565554444
No 73
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.45 E-value=5.5e-13 Score=120.62 Aligned_cols=100 Identities=21% Similarity=0.294 Sum_probs=81.4
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCC-CCCCccCcEEEEEEEcCCccEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKD-SWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~n-n~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+ . +++|+++.+ +.||+|||+|.|.+..+....|.|+
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~--~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~ 68 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----V--TKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVA 68 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----C--ccccccccCCCCCCccCceEEEEecCCCCCEEEEE
Confidence 58999999999973 23456789999999864 2 678998765 6899999999999987666789999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCC---ceEEEccCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDR 618 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~ 618 (632)
|||++ ..+ +++||++.+++..+..| -.+.+|.+.
T Consensus 69 v~d~~-~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~~ 105 (118)
T cd08681 69 VFDDD-KRK-PDLIGDTEVDLSPALKEGEFDDWYELTLK 105 (118)
T ss_pred EEeCC-CCC-CcceEEEEEecHHHhhcCCCCCcEEeccC
Confidence 99998 544 89999999999997554 456777653
No 74
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.45 E-value=6e-13 Score=121.59 Aligned_cols=96 Identities=25% Similarity=0.393 Sum_probs=79.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|.+|+. .+..+.+||||+|.+. |.... ++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~--~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~ 85 (124)
T cd08387 16 GILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSN--TKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLE 85 (124)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCC--cEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEE
Confidence 469999999999973 2344668999999984 33333 6899999999999999999999876543 4799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
|.|||++ ..+++++||++.++|+.+..|
T Consensus 86 i~V~d~~-~~~~~~~iG~~~i~l~~~~~~ 113 (124)
T cd08387 86 VLLYDFD-QFSRDECIGVVELPLAEVDLS 113 (124)
T ss_pred EEEEECC-CCCCCceeEEEEEecccccCC
Confidence 9999998 777899999999999999754
No 75
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.44 E-value=6e-13 Score=121.86 Aligned_cols=98 Identities=20% Similarity=0.350 Sum_probs=79.5
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+...... ++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 16 ~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~--~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~ 87 (127)
T cd04030 16 QKLIVTVHKCRNLPP------CDSSDIPDPYVRLYLLPDKSKST--RRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLD 87 (127)
T ss_pred CEEEEEEEEEECCCC------ccCCCCCCceEEEEEEcCCCCCc--eEecccccCCCCCEECeEEEEecCHHHhcCCEEE
Confidence 569999999999974 23346789999999975433233 7899999999999999999999875543 5799
Q ss_pred EEEEeccCCC--CCCCccEEEEEeCcccCCC
Q 042071 581 IEIHERDDIL--QKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 581 f~V~D~d~~~--~~ddflGq~~lpL~~L~~G 609 (632)
|.|||.+ .. +++++||++.++|..|..+
T Consensus 88 i~v~~~~-~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 88 VAVKNSK-SFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEEEECC-cccCCCCceEEEEEEeccccccc
Confidence 9999988 43 5789999999999998654
No 76
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.44 E-value=2.2e-13 Score=126.00 Aligned_cols=112 Identities=20% Similarity=0.291 Sum_probs=85.7
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
...|.|+|++|++|+. .+..+.+||||+|.+.+...... +.||++++++.||+|||+|.|.+..+++ ..|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~--~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l 83 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKS--KHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTL 83 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccC--CceeeeEeccCCCCcccEEEEECCHHHhCCCEE
Confidence 3569999999999974 23346689999999975332233 6899999999999999999999876654 479
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCCc-eEEEccCCCCCc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQGI-RAVPLHDRKGNE 622 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy-R~ipL~d~~g~~ 622 (632)
.|.|||+| ..+++++||++.+++.+..+.. .+..|+...+++
T Consensus 84 ~~~V~d~d-~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~ 126 (133)
T cd08384 84 EITVWDKD-IGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKK 126 (133)
T ss_pred EEEEEeCC-CCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCC
Confidence 99999998 6677999999999998744332 233555554444
No 77
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.44 E-value=7.7e-13 Score=119.02 Aligned_cols=105 Identities=27% Similarity=0.418 Sum_probs=87.4
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+.. +..+.+||||+|.+.+. . .++|+++.++.||+|||+|.|.+.......|.|.||
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~~----~--~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~ 68 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNGE----K--VFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVY 68 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECCC----c--ceeeceecCCCCCcccccEEEEeccCCCCEEEEEEE
Confidence 57999999999742 23456799999998651 2 579999999999999999999987655578999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCCCCc
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRKGNE 622 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~g~~ 622 (632)
|++ ..+++++||++.+++..+..| .+++||....|..
T Consensus 69 d~~-~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~ 108 (115)
T cd04040 69 DWD-RGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK 108 (115)
T ss_pred eCC-CCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc
Confidence 998 667899999999999999887 7899998776654
No 78
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.44 E-value=6.9e-13 Score=121.08 Aligned_cols=98 Identities=27% Similarity=0.433 Sum_probs=83.0
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+.. .+||||+|.+.+ . +.||++++++.||+|||+|.|.+..+....|.|.||
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~--~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~ 64 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----Y--KGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVW 64 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----c--cccccccCCCCCCccceEEEEEcCCCcCCEEEEEEE
Confidence 78999999999731 479999999853 2 689999999999999999999987666678999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCC--------CceEEEccCCCCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQ--------GIRAVPLHDRKGN 621 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~--------GyR~ipL~d~~g~ 621 (632)
|+| .. ++++||++.++|+.+.. .-+|.+|.+..+.
T Consensus 65 d~d-~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~ 107 (121)
T cd08378 65 DKD-KA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGG 107 (121)
T ss_pred eCC-CC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCC
Confidence 998 44 78999999999999854 2489999988763
No 79
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.44 E-value=8e-13 Score=120.25 Aligned_cols=100 Identities=17% Similarity=0.277 Sum_probs=79.5
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
...|+|+|++|++|+... ...+.+||||+|.+.+...... +++|++++++.||+|||+|.|.+...++ ..|
T Consensus 13 ~~~L~V~v~~a~~L~~~~-----~~~~~~dpyv~v~l~~~~~~~~--~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l 85 (123)
T cd08521 13 TGSLEVHIKECRNLAYAD-----EKKKRSNPYVKVYLLPDKSKQS--KRKTSVKKNTTNPVFNETLKYHISKSQLETRTL 85 (123)
T ss_pred CCEEEEEEEEecCCCCcC-----CCCCCCCcEEEEEEecCCCcCc--eeeccccCCCCCCcccceEEEeCCHHHhCCCEE
Confidence 356999999999997421 0235689999999864322222 6899999999999999999999876543 579
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
.|.|||++ ..+++++||++.++|..+..|
T Consensus 86 ~i~v~d~~-~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 86 QLSVWHHD-RFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEEeCC-CCcCCceeeEEEEeccccccc
Confidence 99999998 677899999999999999644
No 80
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.43 E-value=5.8e-13 Score=119.39 Aligned_cols=98 Identities=19% Similarity=0.218 Sum_probs=81.3
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc----cE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL----AL 578 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel----a~ 578 (632)
..|+|+|+.|++|+ .+.+||||+|.+.+. +++|++++++.||.|||+|.|.+..+.. +.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~~-------~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~ 66 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGGQ-------KKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKI 66 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECCE-------eeeeeEEeccCCCccccEEEEecCCCHHHHhcCe
Confidence 56899999999986 134799999999752 6789999999999999999999865432 57
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccCCCc------eEEEccCC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELRQGI------RAVPLHDR 618 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy------R~ipL~d~ 618 (632)
|.|.|||++ ..+++++||++.++|+.+..+- +|+||.|+
T Consensus 67 l~i~V~d~~-~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 67 IKISVYDSR-SLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEEEcCc-ccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 999999998 6677999999999999996653 56788763
No 81
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.43 E-value=8e-13 Score=122.53 Aligned_cols=98 Identities=23% Similarity=0.397 Sum_probs=78.7
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcC----CccE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVP----ELAL 578 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~p----ela~ 578 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+........++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~------~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLP------LDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 469999999999974 233466899999999753320011278999999999999999999998653 2468
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
|.|.|||++ ..+++++||++.++|++|.
T Consensus 90 l~~~V~d~d-~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYD-LLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecC-CCCCCcEeEEEEEeHHHCC
Confidence 999999998 7777999999999999986
No 82
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.43 E-value=2.4e-13 Score=125.99 Aligned_cols=111 Identities=16% Similarity=0.200 Sum_probs=86.8
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+..+.+||||+|.+........ +++|++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~--~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~ 85 (134)
T cd08403 14 GRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLK--KKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLI 85 (134)
T ss_pred CEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccc--eecCCcccCCCCCcccceEEEECCHHHhCCCEEE
Confidence 569999999999973 23456789999999864322222 6799999999999999999999864443 4689
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCceEE-EccCCCCCc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGIRAV-PLHDRKGNE 622 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~i-pL~d~~g~~ 622 (632)
|.|||++ ..+++++||++.+++.....|++|. .|+...|++
T Consensus 86 ~~v~d~~-~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~ 127 (134)
T cd08403 86 IAVVDYD-RVGHNELIGVCRVGPNADGQGREHWNEMLANPRKP 127 (134)
T ss_pred EEEEECC-CCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCe
Confidence 9999999 7788999999999998777777653 565655654
No 83
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.43 E-value=5.7e-13 Score=121.82 Aligned_cols=107 Identities=24% Similarity=0.325 Sum_probs=87.3
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCC-CCCCccCcEEEEEEEcCC----ccE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKD-SWVPAWNKEFKFQLTVPE----LAL 578 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~n-n~nP~WNEtf~F~v~~pe----la~ 578 (632)
+|+|+|++|++|+. .+..+.+||||+|.+.+ .. +++|+++.+ +.||+|||+|.|.+..++ ...
T Consensus 1 ~L~V~V~sA~~L~~------~~~~~~~dpYv~v~~~~----~~--~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~ 68 (125)
T cd04051 1 TLEITIISAEDLKN------VNLFGKMKVYAVVWIDP----SH--KQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLA 68 (125)
T ss_pred CEEEEEEEcccCCC------CCcccCCceEEEEEECC----Cc--ccccccccCCCCCCCCCCEEEEEcChHhcccCccE
Confidence 48999999999974 23346789999999865 12 678999865 689999999999998775 478
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccCCCc--------eEEEccCCCCCcc
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELRQGI--------RAVPLHDRKGNEY 623 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy--------R~ipL~d~~g~~~ 623 (632)
|.|.|||++ ..+.+++||++.+||..+..+. .+.+|.+..|++-
T Consensus 69 l~~~v~d~~-~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~ 120 (125)
T cd04051 69 LTIEVYCER-PSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQ 120 (125)
T ss_pred EEEEEEECC-CCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcC
Confidence 999999998 5577999999999999997655 3578998888763
No 84
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.43 E-value=2.8e-13 Score=125.99 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=83.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+...... +++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~--~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~ 85 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIK--TKKTSCMRGTIDPFYNESFSFKVPQEELENVSLV 85 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccc--eEcCccccCCCCCccceeEEEeCCHHHhCCCEEE
Confidence 469999999999974 23446789999999853211112 5799999999999999999999876555 3699
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCC--ceEEEccCCCCCc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQG--IRAVPLHDRKGNE 622 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~G--yR~ipL~d~~g~~ 622 (632)
|.|||+| ..+++++||++.|...+.... -.+-.|++..|.+
T Consensus 86 ~~V~d~d-~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~ 128 (135)
T cd08410 86 FTVYGHN-VKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTA 128 (135)
T ss_pred EEEEeCC-CCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCE
Confidence 9999998 678899999998776555442 2344566665554
No 85
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.43 E-value=9.3e-13 Score=120.15 Aligned_cols=100 Identities=25% Similarity=0.382 Sum_probs=82.5
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+. .+..+.+||||+|.+.+. +.+|++++++.||+|||+|.|.+..+....|.|.||
T Consensus 2 L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~~-------~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~ 68 (123)
T cd04025 2 LRCHVLEARDLAP------KDRNGTSDPFVRVFYNGQ-------TLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVW 68 (123)
T ss_pred EEEEEEEeeCCCC------CCCCCCcCceEEEEECCE-------EEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEE
Confidence 8999999999973 233456899999998542 678999999999999999999998766678999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC---ceEEEccCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDR 618 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~ 618 (632)
|++ ..+.+++||++.++|..+..+ -.+..|...
T Consensus 69 d~~-~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~ 104 (123)
T cd04025 69 DWD-LVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPD 104 (123)
T ss_pred ECC-CCCCCcEeEEEEEEHHHcccCCCCCCEEECCCC
Confidence 998 677899999999999998654 356677653
No 86
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.42 E-value=3.1e-13 Score=127.08 Aligned_cols=92 Identities=23% Similarity=0.451 Sum_probs=79.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|+|++|.+|-. .|..+.+||||.+.+.+. +.||+++.+|.||+|||+|+|.|..|. ..|.+.
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~q-------~lkT~~v~~n~NPeWNe~ltf~v~d~~-~~lkv~ 71 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGNQ-------KLKTRVVYKNLNPEWNEELTFTVKDPN-TPLKVT 71 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECCe-------eeeeeeecCCCCCcccceEEEEecCCC-ceEEEE
Confidence 458999999999863 233366899999998753 789999999999999999999999875 569999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
|||+| .++.|||+|.+.|||..+..+
T Consensus 72 VyD~D-~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 72 VYDKD-TFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred EEeCC-CCCcccccceeeeccHHHHHH
Confidence 99999 888999999999999988654
No 87
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.42 E-value=1.3e-12 Score=118.14 Aligned_cols=104 Identities=23% Similarity=0.385 Sum_probs=85.0
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+. +.+|++++++.||.|||+|.|.+... ...|.|.|
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~~-------~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v 67 (119)
T cd08377 2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVNA-------RLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTV 67 (119)
T ss_pred EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECCE-------eeecceecCCcCCccCcEEEEEecCc-CCEEEEEE
Confidence 58999999999974 233456899999998542 57999999999999999999997542 35799999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCCc-eEEEccCCCCCc
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQGI-RAVPLHDRKGNE 622 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~Gy-R~ipL~d~~g~~ 622 (632)
||++ ..+++++||++.+++..+..|. ++.+|.+..+..
T Consensus 68 ~d~~-~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~ 106 (119)
T cd08377 68 YDED-KDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRT 106 (119)
T ss_pred EECC-CCCCCceeeEEEEEHHHCCCCCceEEECcccCCCC
Confidence 9998 6678999999999999998774 677888776543
No 88
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.42 E-value=6.9e-13 Score=122.26 Aligned_cols=95 Identities=18% Similarity=0.284 Sum_probs=76.0
Q ss_pred eEEEEEEEecccccccCCCcccCCC-CCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEE-EEcCCc--cE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDAC-SPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQ-LTVPEL--AL 578 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~-s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~-v~~pel--a~ 578 (632)
..|+|+|++|++|+.. +.. +.+||||+|.+.+ .... +.||+++++++||+|||+|.|. +...++ ..
T Consensus 16 ~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~--~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~ 85 (128)
T cd08388 16 KALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEH--KVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLS 85 (128)
T ss_pred CEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCc--eeeccEEcCCCCCceeeEEEEcccCHHHhCCCE
Confidence 4699999999999842 222 5679999999853 2333 6799999999999999999994 543222 36
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccCC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
|+|.|||+| ..+++++||++.+||..+..
T Consensus 86 L~~~V~d~d-~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 86 LHFAVLSFD-RYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEEEEEEcC-CCCCCceeEEEEEeccccCC
Confidence 999999998 77889999999999999854
No 89
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.41 E-value=4.3e-13 Score=124.70 Aligned_cols=111 Identities=18% Similarity=0.250 Sum_probs=85.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
.+|+|+|++|++|+. .+..+.+||||+|.+.+...... +.||++++++.||+|||+|.|.+....+ ..|.
T Consensus 15 ~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~--~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~ 86 (136)
T cd08405 15 NRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVE--KKKTVIKKRTLNPVFNESFIFNIPLERLRETTLI 86 (136)
T ss_pred CeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccc--cccCcceeCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 569999999999973 23456789999999863222222 6799999999999999999999864433 5799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc-eEEEccCCCCCc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI-RAVPLHDRKGNE 622 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy-R~ipL~d~~g~~ 622 (632)
|.|||++ ..+++++||++.+++.....+. .+..|+..-|.+
T Consensus 87 ~~v~d~~-~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~ 128 (136)
T cd08405 87 ITVMDKD-RLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQP 128 (136)
T ss_pred EEEEECC-CCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCc
Confidence 9999998 7778999999999999874443 334565555554
No 90
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.40 E-value=1.2e-12 Score=120.82 Aligned_cols=107 Identities=29% Similarity=0.453 Sum_probs=83.3
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+........+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999974 234467899999999864211111256899999999999999999998643 35789999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC---------ceEEEccCC
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG---------IRAVPLHDR 618 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G---------yR~ipL~d~ 618 (632)
||++ ..+++++||++.++++++..+ -++.||...
T Consensus 74 ~d~~-~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~ 116 (133)
T cd04033 74 FDEN-RLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPR 116 (133)
T ss_pred EECC-CCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeec
Confidence 9998 677899999999999998643 256777744
No 91
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.40 E-value=1.2e-12 Score=119.03 Aligned_cols=105 Identities=24% Similarity=0.262 Sum_probs=82.1
Q ss_pred EEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEEeccC
Q 042071 509 LYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIHERDD 588 (632)
Q Consensus 509 Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~ 588 (632)
.++|++|+. .+..+.+||||+|.+.+........++||++++++.||+|||+|.|.+..++...|+|+|||+|
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d- 78 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVD- 78 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEec-
Confidence 478888873 2345678999999998754111112689999999999999999999987777788999999998
Q ss_pred C----CCCCCccEEEEEeCcccCCC---ceEEEccCCCC
Q 042071 589 I----LQKDDFGGQTCLPVSELRQG---IRAVPLHDRKG 620 (632)
Q Consensus 589 ~----~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~g 620 (632)
. .+++++||++.+++.+|..+ ...++|.+..+
T Consensus 79 ~~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 79 SKSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CCcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 5 67899999999999999754 35667755444
No 92
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.39 E-value=2.4e-12 Score=118.24 Aligned_cols=101 Identities=19% Similarity=0.329 Sum_probs=82.1
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|+|++|++|+.. +.+||||+|.+.+. . ..||++. ++.||.|||+|.|.+..+++..+.|.
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~~----~--~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~ 67 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNEV----K--VARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTIS 67 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECCE----e--EEEeecC-CCCCCccCCEEEEecCCCCcCEEEEE
Confidence 3599999999999731 24699999999542 1 4688874 57999999999999776766678899
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCCc---eEEEccCCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQGI---RAVPLHDRKG 620 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d~~g 620 (632)
|+|++ ..+++++||++.+||..+..|. .|.+|....+
T Consensus 68 v~d~~-~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~ 107 (126)
T cd08400 68 LSNKA-KRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASP 107 (126)
T ss_pred EEECC-CCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCC
Confidence 99998 6778999999999999999886 5788876643
No 93
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.39 E-value=2.4e-12 Score=118.76 Aligned_cols=112 Identities=27% Similarity=0.387 Sum_probs=89.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC-ccEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE-LALLRI 581 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe-la~Lrf 581 (632)
..|+|+|++|++|+.. +..+.+||||+|.+.+.+.+.. +++|+++++++||.|||+|.|.+..++ ...|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~--~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v 84 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNET--KQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSI 84 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCc--eecceeecCCCCCCccceEEEeCCchhcCCEEEE
Confidence 4599999999999742 2235689999999986555444 789999999999999999999987553 357999
Q ss_pred EEEeccCCCCCCCccEEEEEeCcccCCC--ceEEEccCCCCCcc
Q 042071 582 EIHERDDILQKDDFGGQTCLPVSELRQG--IRAVPLHDRKGNEY 623 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~~L~~G--yR~ipL~d~~g~~~ 623 (632)
.|||++ ..+.+++||++.++|+++..+ -.|.+|.+..--.+
T Consensus 85 ~v~d~~-~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~~~~~ 127 (131)
T cd04026 85 EVWDWD-RTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQEEGEY 127 (131)
T ss_pred EEEECC-CCCCcceeEEEEEeHHHhCcCccCceEECcCcccccc
Confidence 999998 667889999999999998643 46788888654443
No 94
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.38 E-value=2.4e-12 Score=117.66 Aligned_cols=102 Identities=22% Similarity=0.430 Sum_probs=83.3
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+. .+.++.+||||+|.+.| .. .+||++++++.||+|||+|.|.+.. ...|.|.||
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~--~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~ 67 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQ--THSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVF 67 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----cc--ceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEE
Confidence 7899999999973 24456789999999864 22 6899999999999999999999854 468999999
Q ss_pred eccCCCCC--CCccEEEEEeCcccCC----CceEEEccCCCCC
Q 042071 585 ERDDILQK--DDFGGQTCLPVSELRQ----GIRAVPLHDRKGN 621 (632)
Q Consensus 585 D~d~~~~~--ddflGq~~lpL~~L~~----GyR~ipL~d~~g~ 621 (632)
|++ ..+. ++|||++.+++..|.. +..|+||.+....
T Consensus 68 d~~-~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~ 109 (123)
T cd08382 68 DQK-KFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKS 109 (123)
T ss_pred ECC-CCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCC
Confidence 998 4443 5799999999999752 3789999777653
No 95
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.38 E-value=3.1e-12 Score=117.03 Aligned_cols=107 Identities=19% Similarity=0.323 Sum_probs=83.8
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+. ... ..||++++++.||.|||+|.|.+..+....|.|.|
T Consensus 2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~--~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v 71 (126)
T cd04043 2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRR--IAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATV 71 (126)
T ss_pred EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--Cee--eecccEecCCCCCcccceEEEEcCCCCCCEEEEEE
Confidence 58999999999974 233467899999986432 112 57999999999999999999998876567899999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCC---Cc---eEEEccCCCCCc
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQ---GI---RAVPLHDRKGNE 622 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~---Gy---R~ipL~d~~g~~ 622 (632)
||++ ..+++++||++.++|..+.. |. ++++|. ..|+.
T Consensus 72 ~d~d-~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~-~~g~i 114 (126)
T cd04043 72 WDRS-FVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLD-TQGRL 114 (126)
T ss_pred EECC-CCCCCceEEEEEEecCHHHcCCCCCCceEEEEcC-CCCeE
Confidence 9998 66789999999999987532 32 578885 45553
No 96
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.38 E-value=2.5e-12 Score=117.91 Aligned_cols=95 Identities=18% Similarity=0.292 Sum_probs=76.5
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEE-EEcCC--ccEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQ-LTVPE--LALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~-v~~pe--la~L 579 (632)
..|+|+|+.|++|+.. +..+..||||++.+.+. ... ++||+++++ .||+|||+|.|. +...+ ...|
T Consensus 16 ~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp~--~~~--~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L 84 (124)
T cd08389 16 RKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLPS--KKQ--RAKTKVQRG-PNPVFNETFTFSRVEPEELNNMAL 84 (124)
T ss_pred CEEEEEEEEecCCCch------hcCCCCCcEEEEEEccC--Ccc--eeecccccC-CCCcccCEEEECCCCHHHhccCEE
Confidence 4699999999999742 23355799999887543 333 789999888 999999999998 55433 3579
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
+|.|||++ ..+++++||++.+||+.+..+
T Consensus 85 ~~~V~~~~-~~~~~~~lG~~~i~L~~l~~~ 113 (124)
T cd08389 85 RFRLYGVE-RMRKERLIGEKVVPLSQLNLE 113 (124)
T ss_pred EEEEEECC-CcccCceEEEEEEeccccCCC
Confidence 99999998 678899999999999999765
No 97
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.38 E-value=2.6e-12 Score=116.95 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=81.6
Q ss_pred eEEEEEEEecccccccCCCcccC-CCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFD-ACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d-~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
..|+|+|++|++|+.. + ..+.+||||+|.+.. .+.. .++|+++++++||+|||+|.|.+...++ ..|
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~--~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l 83 (123)
T cd08390 14 EQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERR--SLQSKVKRKTQNPNFDETFVFQVSFKELQRRTL 83 (123)
T ss_pred CEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCC--ceEeeeEcCCCCCccceEEEEEcCHHHhcccEE
Confidence 4699999999999742 2 245689999999853 2333 6789999999999999999999876544 479
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCCc---eEEEc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQGI---RAVPL 615 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL 615 (632)
.|.|||.+ ..+++++||++.++|+.+..+. .|+||
T Consensus 84 ~i~v~d~~-~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 84 RLSVYDVD-RFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEEEECC-cCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 99999998 6667899999999999987643 55565
No 98
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.38 E-value=2.3e-12 Score=118.31 Aligned_cols=100 Identities=21% Similarity=0.307 Sum_probs=83.4
Q ss_pred EEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEec
Q 042071 509 LYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHER 586 (632)
Q Consensus 509 Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~ 586 (632)
|++|++|+. ..+.+||||+|.+.+. +++|++++++.||+|||+|.|.+..+ +...|.|.|||+
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~~-------~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~ 66 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRGV-------KKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDY 66 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECCE-------eeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEEC
Confidence 678888863 2456899999998652 67999999999999999999998754 457899999999
Q ss_pred cCCCCCCCccEEEEEeCcccCCCc---eEEEccCCCCCccC
Q 042071 587 DDILQKDDFGGQTCLPVSELRQGI---RAVPLHDRKGNEYK 624 (632)
Q Consensus 587 d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d~~g~~~~ 624 (632)
+ ..+++++||++.++|+.+..+. .++||.+..|....
T Consensus 67 ~-~~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~ 106 (127)
T cd08373 67 E-KVGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG 106 (127)
T ss_pred C-CCCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc
Confidence 8 6778899999999999998664 47899998887654
No 99
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.38 E-value=3e-12 Score=122.86 Aligned_cols=97 Identities=23% Similarity=0.334 Sum_probs=77.9
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcC-Cc--cE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVP-EL--AL 578 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~p-el--a~ 578 (632)
...|.|+|++|.+|+.. +..+.+||||+|.+........ ++||++++++.||+|||+|.|.+..+ ++ ..
T Consensus 26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~--~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~ 97 (162)
T cd04020 26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKS--KQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQAC 97 (162)
T ss_pred CceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCc--ceeCCccCCCCCCCCCCEEEEecCCHHHhCCCE
Confidence 46799999999999842 3346789999999864322223 78999999999999999999986432 22 47
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
|.|.|||++ ..+++++||++.+++..+.
T Consensus 98 L~i~V~d~d-~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 98 LELTVWDHD-KLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEEEeCC-CCCCCceEEEEEEeCCccc
Confidence 999999998 6778999999999999874
No 100
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.37 E-value=2.4e-12 Score=117.56 Aligned_cols=97 Identities=18% Similarity=0.292 Sum_probs=78.0
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcC---CccE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVP---ELAL 578 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~p---ela~ 578 (632)
...|+|+|++|++|+. .+..+..||||+|.+.+ .+.. +.+|++++++.||+|||+|.|.+... ....
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~--~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~ 84 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKH--KLETKVKRKNLNPHWNETFLFEGFPYEKLQQRV 84 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCc--ceeeeeecCCCCCccceeEEEcccCHHHhCCCE
Confidence 3569999999999974 23345689999999853 2333 68999999999999999999985322 2357
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
|.|.|||+| ..+++++||++.++|+.+..|
T Consensus 85 l~~~v~d~d-~~~~~~~iG~~~i~l~~l~~~ 114 (125)
T cd08386 85 LYLQVLDYD-RFSRNDPIGEVSLPLNKVDLT 114 (125)
T ss_pred EEEEEEeCC-CCcCCcEeeEEEEecccccCC
Confidence 999999998 677899999999999998765
No 101
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.36 E-value=2e-12 Score=120.65 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=77.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|++|++|+. .+ .+.+||||+|.+.+...... ++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 15 ~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~--~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~ 85 (137)
T cd08409 15 NRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVK--TKKTEVVDGAASPSFNESFSFKVTSRQLDTASLS 85 (137)
T ss_pred CeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEee--eeecccEeCCCCCcccceEEEECCHHHhCccEEE
Confidence 569999999999973 23 45689999999875422222 6799999999999999999999865444 6899
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
|.||+++ ..+++++||++.++......|
T Consensus 86 ~~V~~~~-~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 86 LSVMQSG-GVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEEEeCC-CCCCcceEEEEEECCcccCCC
Confidence 9999998 677899999999997654433
No 102
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.36 E-value=5.9e-12 Score=113.98 Aligned_cols=109 Identities=21% Similarity=0.280 Sum_probs=84.4
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|+|+|++|++|+...........+.+||||+|.+.+ . .++|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~--~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v 74 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----Q--TFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIEL 74 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----E--eEEccccCCCCCCcccceEEEEeCCCCCCEEEEEE
Confidence 4899999999997421100000124689999999854 2 68999999999999999999998765567899999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC---ceEEEccCC-CCC
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDR-KGN 621 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~-~g~ 621 (632)
||++ .. ++++||++.++|..+..+ -.+++|.+. +|+
T Consensus 75 ~d~~-~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~G~ 114 (121)
T cd08391 75 FDED-PD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDVKSGR 114 (121)
T ss_pred EecC-CC-CCCcEEEEEEEHHHhcccCccceEEECcCCCCce
Confidence 9998 55 789999999999998653 278899874 454
No 103
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.36 E-value=3.6e-12 Score=116.77 Aligned_cols=91 Identities=22% Similarity=0.392 Sum_probs=77.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|.|++|++|+. .+..+.+||||+|.+.+. .. +.||+++++++||+|||+|.|.+..++...|.|+||
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~--~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~ 70 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KI--NDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVM 70 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---ec--cceeeEEECCCCCccceEEEEEecCCCCCEEEEEEE
Confidence 7899999999974 234567899999998653 12 467888889999999999999988787789999999
Q ss_pred eccCCCCCCCccEEEEEeCcccC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
|+| ..+++++||++.++|....
T Consensus 71 d~d-~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 71 DYD-LLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred ECC-CCCCCceeEEEEEeecccc
Confidence 998 6778999999999998765
No 104
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.35 E-value=3.6e-12 Score=116.26 Aligned_cols=97 Identities=22% Similarity=0.430 Sum_probs=78.3
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEE-EEcCCc--cEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQ-LTVPEL--ALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~-v~~pel--a~L 579 (632)
..|+|+|++|++|+. .+..+.+||||+|.+.+...+.. +.||++++++.||+|||+|.|. +...++ ..|
T Consensus 15 ~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~--~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l 86 (123)
T cd04035 15 SALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKAT--KLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTL 86 (123)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCC--ceeeeeecCCCCCCccceEEEcCCCHHHhCCCEE
Confidence 569999999999973 23345689999999975444333 7899999999999999999996 333333 479
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
.|.|||++ .. ++++||++.++|++|..+
T Consensus 87 ~~~v~d~~-~~-~~~~iG~~~i~l~~l~~~ 114 (123)
T cd04035 87 RLLVLDED-RF-GNDFLGETRIPLKKLKPN 114 (123)
T ss_pred EEEEEEcC-Cc-CCeeEEEEEEEcccCCCC
Confidence 99999998 55 789999999999999876
No 105
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.35 E-value=5.7e-12 Score=115.33 Aligned_cols=102 Identities=20% Similarity=0.358 Sum_probs=83.9
Q ss_pred EEEEEEEecccccccCCCcccCC--CCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDA--CSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRI 581 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~--~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf 581 (632)
.|+|+|++|++|+.. +. .+.+||||.|.+.+ . +.+|++++++.||+|||+|.|.+..+....|.|
T Consensus 2 ~l~v~v~~a~~L~~~------~~~~~~~~dPyv~v~~~~-----~--~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i 68 (128)
T cd04024 2 VLRVHVVEAKDLAAK------DRSGKGKSDPYAILSVGA-----Q--RFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKL 68 (128)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCcCCeEEEEECC-----E--EEecceecCCcCCccCCcEEEEecCCCCCEEEE
Confidence 589999999999741 22 46689999998743 2 689999999999999999999998755678999
Q ss_pred EEEeccCCCCCCCccEEEEEeCcccC----CC--ceEEEccCCC
Q 042071 582 EIHERDDILQKDDFGGQTCLPVSELR----QG--IRAVPLHDRK 619 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~~L~----~G--yR~ipL~d~~ 619 (632)
.|||++ ..+.+++||++.++|..+. .| -.+++|.+..
T Consensus 69 ~v~d~~-~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~ 111 (128)
T cd04024 69 ILWDKD-RFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTR 111 (128)
T ss_pred EEEECC-CCCCCCcceEEEEEHHHhhcccccCccceeEEccCcc
Confidence 999998 6668999999999999985 23 3678888773
No 106
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.34 E-value=3.6e-12 Score=116.97 Aligned_cols=101 Identities=23% Similarity=0.364 Sum_probs=81.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|.|+|++|++|+. ..+.+||||.+.+.+ ... ++||++++++.||+|||+|.|.+.. +...|.|.||
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~--~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~ 66 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQ--KYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVY 66 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCc--EEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEE
Confidence 5799999999973 345689999999852 122 6899999999999999999999853 3467999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRKG 620 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~g 620 (632)
|++ ..+++++||++.++++.|..+ -.++||....+
T Consensus 67 d~~-~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~ 104 (126)
T cd08678 67 DNG-KKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPY 104 (126)
T ss_pred ECC-CCCCCceEEEEEEeHHHhccCCceeEEEEecCCCC
Confidence 999 667799999999999998754 35678876543
No 107
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.34 E-value=3.3e-12 Score=119.28 Aligned_cols=98 Identities=17% Similarity=0.314 Sum_probs=78.9
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
.+|.|+|+.|++|+. .+..+.+||||+|.+....... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 15 ~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~-~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 15 GRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQE-ISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcc-eeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 569999999999974 2344568999999996432211 126799999999999999999999876544 5899
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
|.|||++ ..+++++||++.+++.....
T Consensus 88 ~~V~~~~-~~~~~~~iG~v~l~~~~~~~ 114 (138)
T cd08408 88 FSVYNKR-KMKRKEMIGWFSLGLNSSGE 114 (138)
T ss_pred EEEEECC-CCCCCcEEEEEEECCcCCCc
Confidence 9999998 67889999999999987654
No 108
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.34 E-value=1.6e-12 Score=119.92 Aligned_cols=112 Identities=17% Similarity=0.218 Sum_probs=87.9
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC--ccEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE--LALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe--la~Lr 580 (632)
..|.|+|++|++|+.. +..+.+||||+|.+.+...... +++|++++++.||.|||+|.|.+..+. ...|+
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~--~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~ 85 (134)
T cd00276 14 ERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLK--KKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLV 85 (134)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEee--eecCcceecCCCCeeeeeEEEECCHHHhCCcEEE
Confidence 4699999999999742 2345689999999976433333 679999999999999999999987654 36899
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc-eEEEccCCCCCcc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI-RAVPLHDRKGNEY 623 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy-R~ipL~d~~g~~~ 623 (632)
|.|||.+ ..+++++||++.++++....+. .+.+|++..|+++
T Consensus 86 ~~v~d~~-~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 86 ITVVDKD-SVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEEEecC-CCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 9999998 5577899999999999944443 3457777766643
No 109
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.34 E-value=1.5e-11 Score=112.95 Aligned_cols=99 Identities=24% Similarity=0.391 Sum_probs=81.6
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|+|++|++|+. .+.++.+||||+|.+.+. +.||++++++.||+|||.|.|.+..+ -..|.|.
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~~-------~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~ 68 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEGE-------SVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQ 68 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECCE-------EEEeCccCCCCCCcccceEEEEecCC-CCEEEEE
Confidence 358999999999863 234567899999987542 67999999999999999999987655 3579999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCC-CceEEEccC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQ-GIRAVPLHD 617 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~-GyR~ipL~d 617 (632)
|||++ .. .+++||.+.+++..+.. .+++++|..
T Consensus 69 V~d~~-~~-~d~~lG~~~~~l~~~~~~~~~~~~l~~ 102 (126)
T cd04046 69 VWNSN-LL-CDEFLGQATLSADPNDSQTLRTLPLRK 102 (126)
T ss_pred EEECC-CC-CCCceEEEEEecccCCCcCceEEEccc
Confidence 99998 54 58999999999997754 478899963
No 110
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.33 E-value=5.3e-12 Score=118.85 Aligned_cols=91 Identities=26% Similarity=0.450 Sum_probs=77.3
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|+|++|.+|+. .+. +.+||||+|.+.+. +.||++++++.||+|||+|.|.+..+ ...|.|+
T Consensus 2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~~-------~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~ 66 (145)
T cd04038 2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGNQ-------KVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLE 66 (145)
T ss_pred eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECCE-------EEEeeeEcCCCCCeecccEEEEecCC-CCEEEEE
Confidence 358999999999973 123 56799999998532 68999999999999999999999876 5679999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
|||++ ..+++++||++.+++..|..+
T Consensus 67 V~D~d-~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 67 VFDKD-TFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred EEECC-CCCCCCEEEEEEEEHHHhhhh
Confidence 99999 778899999999999998654
No 111
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.31 E-value=7.4e-12 Score=112.89 Aligned_cols=92 Identities=23% Similarity=0.348 Sum_probs=70.4
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|.+|++|. +.+||||++.+.+...... +.||++++++.||+|||+|.|.+.. ...|+|.||
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~--~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~ 65 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVK--KAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCY 65 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccce--eeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEE
Confidence 579999999985 2379999998864322123 7899999999999999999999863 348999999
Q ss_pred ecc------CCCCCCCccEEEEEeCcc--cC-CCce
Q 042071 585 ERD------DILQKDDFGGQTCLPVSE--LR-QGIR 611 (632)
Q Consensus 585 D~d------~~~~~ddflGq~~lpL~~--L~-~GyR 611 (632)
|++ +..+.|+++|.+.+.|+. +. .|++
T Consensus 66 d~~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~ 101 (118)
T cd08686 66 EKCYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQ 101 (118)
T ss_pred EcccccccccccCcccEEEEEEEEECHHHhccCCee
Confidence 972 145679999887777653 43 3664
No 112
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.30 E-value=1.5e-11 Score=114.73 Aligned_cols=104 Identities=26% Similarity=0.376 Sum_probs=84.3
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcC----------
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVP---------- 574 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~p---------- 574 (632)
|+|+|++|++|+.. ..+..||||+|.+.+ +.... +++|++++++.||.|||+|.|.+..+
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~-~~~~~--~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~ 70 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNY-SSKTD--TKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKV 70 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEec-CCcCC--eeccceeeCCCCCCcceEEEEEcccccccccccccc
Confidence 57999999999731 235689999999875 22233 78999999999999999999998764
Q ss_pred -----CccEEEEEEEeccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCC
Q 042071 575 -----ELALLRIEIHERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRK 619 (632)
Q Consensus 575 -----ela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~ 619 (632)
.-..|+|.|||++ ..++++|||++.++|..+..+ .++++|....
T Consensus 71 ~~~~~~~~~l~i~V~d~~-~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 71 EEEDLEKSELRVELWHAS-MVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccccEEEEEEEcCC-cCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3357999999998 667899999999999998654 5788888775
No 113
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.29 E-value=2.5e-11 Score=111.65 Aligned_cols=102 Identities=24% Similarity=0.408 Sum_probs=80.9
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+ . +.+|+++++++||.|||+|.|.+..+. ..|.|.|
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~--~~kT~~v~~t~~P~Wne~f~f~~~~~~-~~l~i~v 67 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----T--KKRTKTIPQNLNPVWNEKFHFECHNSS-DRIKVRV 67 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----E--eeecceecCCCCCccceEEEEEecCCC-CEEEEEE
Confidence 58999999999974 23446689999999842 2 579999999999999999999886553 5799999
Q ss_pred EeccCCC-----------CCCCccEEEEEeCcccCCCc-eEEEccCCCC
Q 042071 584 HERDDIL-----------QKDDFGGQTCLPVSELRQGI-RAVPLHDRKG 620 (632)
Q Consensus 584 ~D~d~~~-----------~~ddflGq~~lpL~~L~~Gy-R~ipL~d~~g 620 (632)
||+| .. +.+++||++.+++..+..+- .+.+|....+
T Consensus 68 ~d~d-~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~ 115 (127)
T cd04027 68 WDED-DDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTD 115 (127)
T ss_pred EECC-CCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCC
Confidence 9987 32 46899999999999886553 5667765543
No 114
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.29 E-value=1.7e-11 Score=111.82 Aligned_cols=100 Identities=18% Similarity=0.271 Sum_probs=81.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|.|+|+.|++|+. .+..+..||||.|.+.+. . ..||++++++.||+|||.|.|.+..+ ...|.|.||
T Consensus 2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~~----~--~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~ 68 (121)
T cd04054 2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDNE----V--IIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVL 68 (121)
T ss_pred EEEEEEEeeCCcC------CCCCCCCCceEEEEECCE----e--eeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEE
Confidence 7899999999974 234466899999998542 1 46999999999999999999998543 368999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC----ceEEEccCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG----IRAVPLHDR 618 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G----yR~ipL~d~ 618 (632)
|++ ..++++++|++.+++..+..+ -.|++|...
T Consensus 69 d~~-~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~ 105 (121)
T cd04054 69 DED-TLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEV 105 (121)
T ss_pred ECC-CCCCCCEEEEEEEcHHHhccCCCCCCcEEECeee
Confidence 998 677899999999999887643 368888653
No 115
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.28 E-value=1.6e-11 Score=112.18 Aligned_cols=91 Identities=27% Similarity=0.426 Sum_probs=75.1
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCC-CCCCccCcEEEEEEEcCC---ccEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKD-SWVPAWNKEFKFQLTVPE---LALL 579 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~n-n~nP~WNEtf~F~v~~pe---la~L 579 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+. .++|+++++ +.||+|||+|.|.+..+. ...|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~~-------~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l 68 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRTQ-------ERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKL 68 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECCE-------eeeeeEcCCCCCCCcccceEEEEecCcccCCCCEE
Confidence 58999999999973 233467899999998542 568888875 799999999999998773 4679
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
.|.|||.+ ..+++++||++.++|.++..
T Consensus 69 ~v~V~d~~-~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 69 ILRIMDKD-NFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEEEECc-cCCCCCeEEEEEEEhHHhhh
Confidence 99999998 66789999999999999853
No 116
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.28 E-value=1.9e-11 Score=111.50 Aligned_cols=100 Identities=20% Similarity=0.339 Sum_probs=79.4
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|+.|.+|+... ...+..||||.|.+.+ .. ..+|++++++.||+|||+|.|.+... ...|.|.||
T Consensus 2 l~v~v~~a~~L~~~~-----~~~g~sDpYv~v~l~~----~~--~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~ 69 (121)
T cd08401 2 LKIKIGEAKNLPPRS-----GPNKMRDCYCTVNLDQ----EE--VFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIY 69 (121)
T ss_pred eEEEEEEccCCCCCC-----CCCCCcCcEEEEEECC----cc--EEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEE
Confidence 789999999997421 1134679999999843 12 57899999999999999999998743 358999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCC---ceEEEccC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHD 617 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d 617 (632)
|++ ..+++++||.+.++|+.+..| -.|++|.-
T Consensus 70 d~~-~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 104 (121)
T cd08401 70 DRD-VLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQP 104 (121)
T ss_pred ECC-CCCCCceEEEEEEEHHHccCCCCcEeeEEEEc
Confidence 999 777899999999999999744 34666653
No 117
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.28 E-value=1.9e-11 Score=119.22 Aligned_cols=98 Identities=29% Similarity=0.444 Sum_probs=84.9
Q ss_pred ccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc------ccccHHHHHHHHhhccccc
Q 042071 122 TGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT------APVDLTTCLETIKNYAFDA 195 (632)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT------s~i~f~dvi~aI~~~AF~~ 195 (632)
.+|+-|....+ +.|.++|..||..|||.||+|||-.. +|+|||+|+.++. .-.+|.||++.++++++ .
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~--Dg~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~ 75 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTK--DGELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-N 75 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcC--CCeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-c
Confidence 37888765444 88999999999999999999999987 7999999999986 56889999999999999 8
Q ss_pred CCCceEEEeccCCCH----HHHHHHHHHHHHHhc
Q 042071 196 SEYPVVITFEDHLPP----HLQGEVAALLTRIFD 225 (632)
Q Consensus 196 S~yPvILSlE~Hcs~----~qQ~~mA~il~~ifG 225 (632)
+.+|++|.||.+++. .++.++++.+++..+
T Consensus 76 ~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 76 PDYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 889999999999975 566777777776653
No 118
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.27 E-value=2e-11 Score=111.47 Aligned_cols=93 Identities=24% Similarity=0.395 Sum_probs=74.3
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|.|+|+.|++|+. + + ..||||+|.+.+. +.+|++++++ ||.|||+|.|.+..++.. |.|.|
T Consensus 3 ~L~V~Vv~Ar~L~~----~--~---~~dPYV~Ik~g~~-------k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V 64 (127)
T cd08394 3 LLCVLVKKAKLDGA----P--D---KFNTYVTLKVQNV-------KSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIEL 64 (127)
T ss_pred eEEEEEEEeeCCCC----C--C---CCCCeEEEEECCE-------EeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEE
Confidence 58999999999862 1 1 2478999998432 6789988775 999999999999766544 99999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC-----ceEEEcc
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG-----IRAVPLH 616 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G-----yR~ipL~ 616 (632)
||+| . ..|||+|++.|||+.+..+ =.|+||.
T Consensus 65 ~dkd-~-~~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 65 WNKG-L-IWDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred EeCC-C-cCCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 9998 4 4899999999999998743 2456664
No 119
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.26 E-value=4.1e-11 Score=111.40 Aligned_cols=100 Identities=23% Similarity=0.426 Sum_probs=77.9
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc-C--------
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV-P-------- 574 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~-p-------- 574 (632)
.|+|.|++|++|+. .+..+.+||||+|.+.+. ++||++++++.||+|||+|.|.+.. +
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~~-------~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~ 68 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLNQ-------SQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQ 68 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECCe-------eeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhc
Confidence 48999999999973 244567899999998542 6799999999999999999997532 1
Q ss_pred CccEEEEEEEeccCCCCCCCccEEEEE-eCcccCC---C---ceEEEccC
Q 042071 575 ELALLRIEIHERDDILQKDDFGGQTCL-PVSELRQ---G---IRAVPLHD 617 (632)
Q Consensus 575 ela~Lrf~V~D~d~~~~~ddflGq~~l-pL~~L~~---G---yR~ipL~d 617 (632)
+...|.|+|||+| ..+++++||++.+ |+..++. + =+|++|..
T Consensus 69 ~~~~l~v~V~d~d-~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~ 117 (135)
T cd04017 69 NPPLVVVELFDQD-SVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK 117 (135)
T ss_pred CCCEEEEEEEeCc-CCCCCccceEEEeeeeeecccCCCCCCCceEEEeec
Confidence 1246899999998 6778999999986 6655542 2 37888863
No 120
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.26 E-value=2.5e-11 Score=113.23 Aligned_cols=94 Identities=20% Similarity=0.344 Sum_probs=74.6
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCC--------CCCCccccCCCCCCCCCcc-CcEEEEEEEcC
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGD--------TSSMTDQTEPIKDSWVPAW-NKEFKFQLTVP 574 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d--------~~~~k~kTkvi~nn~nP~W-NEtf~F~v~~p 574 (632)
.++|++++|++|+. +.++.+||||+|.+.+.... .. ++||++++++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~--~~kT~v~~~tlnP~W~nE~f~f~v~~~ 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQ--ECRTSIVENTINPVWHREQFVFVGLPT 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccc--eeeeeeEcCCCCCceEceEEEEEcCCC
Confidence 36899999999962 34578999999999642211 22 689999999999999 99999998543
Q ss_pred CccEEEEEEEeccCCCCC---CCccEEEEEeCcccCCC
Q 042071 575 ELALLRIEIHERDDILQK---DDFGGQTCLPVSELRQG 609 (632)
Q Consensus 575 ela~Lrf~V~D~d~~~~~---ddflGq~~lpL~~L~~G 609 (632)
..|.|+|||++ ..++ +++||++.+||+.|..|
T Consensus 73 --~~L~v~V~D~~-~~~~~~~~d~lG~~~i~l~~l~~~ 107 (137)
T cd08691 73 --DVLEIEVKDKF-AKSRPIIRRFLGKLSIPVQRLLER 107 (137)
T ss_pred --CEEEEEEEecC-CCCCccCCceEEEEEEEHHHhccc
Confidence 47999999986 3222 79999999999999755
No 121
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.26 E-value=3e-11 Score=111.70 Aligned_cols=109 Identities=19% Similarity=0.256 Sum_probs=82.4
Q ss_pred eEEEEEEEecccccccCCCcc--c--CCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTY--F--DACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELAL 578 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~--~--d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~ 578 (632)
..|+|+|+.|++|+....... + ...+.+||||+|.+.+. . ..+|++++++.||+|||+|.|.+. +...
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~~----~--~~kT~~~~~t~~P~Wne~f~~~v~--~~~~ 75 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDDT----H--IGKTSTKPKTNSPVWNEEFTTEVH--NGRN 75 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECCE----E--EeEEeEcCCCCCCCcceeEEEEcC--CCCE
Confidence 469999999999973211000 0 01245799999998542 1 468899888999999999999986 4478
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccCC-----CceEEEccCCCCC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELRQ-----GIRAVPLHDRKGN 621 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~-----GyR~ipL~d~~g~ 621 (632)
|.|.|+|++ ..+.++++|++.++|+.+.. +-.+++|. +.|+
T Consensus 76 l~~~v~d~~-~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-~~G~ 121 (132)
T cd04014 76 LELTVFHDA-AIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-PQGK 121 (132)
T ss_pred EEEEEEeCC-CCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-CCcE
Confidence 999999988 66778999999999999876 25788886 4554
No 122
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.25 E-value=3.3e-11 Score=109.80 Aligned_cols=92 Identities=20% Similarity=0.383 Sum_probs=76.8
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|+|+|++|++|+. .+..+.+||||+|.+.+. . +.+|++++++.||.|||+|.|.+..+. ..|+|+|
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~----~--~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v 68 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNGI----V--KGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEV 68 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECCE----E--eeceeEECCCcCCccCceEEEEecCCC-CEEEEEE
Confidence 58999999999874 234567899999998541 2 678999989999999999999887654 5799999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG 609 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G 609 (632)
||++ ..+++++||++.++|..+..+
T Consensus 69 ~d~~-~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 69 MDYE-KVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred EECC-CCCCCCeeeEEEEeHHHhhCC
Confidence 9998 677889999999999998765
No 123
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.25 E-value=7.4e-11 Score=111.98 Aligned_cols=106 Identities=22% Similarity=0.281 Sum_probs=75.3
Q ss_pred EEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC--------cc
Q 042071 506 KVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE--------LA 577 (632)
Q Consensus 506 ~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe--------la 577 (632)
.++|..+.+++.. ..+..+..||||++++.- |.+. ..+.||++++++.||+|||+|.|.|.... -.
T Consensus 5 el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~-p~~~-~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~ 78 (155)
T cd08690 5 ELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPY-PNEE-PQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRH 78 (155)
T ss_pred EEEEEEeeccccC----CCcCCCCCCeEEEEEEec-CCCC-CceeecCcccCCCCCcccceEEEEeccccchhhhhccCC
Confidence 4555555553321 122234579999999742 2222 23889999999999999999999985442 13
Q ss_pred EEEEEEEeccCCCCCCCccEEEEEeCcccCCC---ceEEEccC
Q 042071 578 LLRIEIHERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHD 617 (632)
Q Consensus 578 ~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d 617 (632)
.|.|+|||+++...+|++||++.++|..|..+ -.+++|++
T Consensus 79 ~L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~ 121 (155)
T cd08690 79 GLKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD 121 (155)
T ss_pred cEEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh
Confidence 59999999983235799999999999999544 34678986
No 124
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.24 E-value=3.9e-11 Score=109.12 Aligned_cols=96 Identities=22% Similarity=0.217 Sum_probs=77.6
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|+|++|++|+... ...+.+||||+|.+.+. .. ..+|++++++.||.|||.|.|.+. +....|.|.
T Consensus 2 g~l~v~v~~a~~L~~~~-----~~~~~~dpyv~v~~~~~---~~--~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~ 70 (124)
T cd04044 2 GVLAVTIKSARGLKGSD-----IIGGTVDPYVTFSISNR---RE--LARTKVKKDTSNPVWNETKYILVN-SLTEPLNLT 70 (124)
T ss_pred eEEEEEEEcccCCCccc-----ccCCCCCCeEEEEECCC---Cc--ceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEE
Confidence 35899999999997311 11245799999999752 22 689999999999999999999987 445689999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCCc
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQGI 610 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~Gy 610 (632)
|||++ ..+++++||++.++|..+..+.
T Consensus 71 v~d~~-~~~~d~~iG~~~~~l~~l~~~~ 97 (124)
T cd04044 71 VYDFN-DKRKDKLIGTAEFDLSSLLQNP 97 (124)
T ss_pred EEecC-CCCCCceeEEEEEEHHHhccCc
Confidence 99998 6667899999999999997653
No 125
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.24 E-value=5.2e-11 Score=113.01 Aligned_cols=96 Identities=27% Similarity=0.416 Sum_probs=76.0
Q ss_pred cceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCC----------------------CCCccccCCCCCC
Q 042071 501 VKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDT----------------------SSMTDQTEPIKDS 558 (632)
Q Consensus 501 ~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~----------------------~~~k~kTkvi~nn 558 (632)
....|+|+|++|++|+. .+..+.+||||+|.+.+..... ....++|++++++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 45679999999999873 2445678999999985321100 0014789999999
Q ss_pred CCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 559 WVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 559 ~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
.||+|||+|.|.+..+....|.|+|||++ ++|||++.++++.|.
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d-----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD-----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC-----CCeEEEEEEEHHHhC
Confidence 99999999999997655678999999976 789999999999987
No 126
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.19 E-value=4.3e-11 Score=100.35 Aligned_cols=85 Identities=32% Similarity=0.560 Sum_probs=72.3
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|++|++|+.. +..+.+||||+|.+.+.+. . .++|++++++.+|.|||+|.|.+..++.+.|.|.||
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~--~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~ 70 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--T--KYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVW 70 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--E--EEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--e--eeeeeeeeccccceeeeeeeeeeecccccceEEEEE
Confidence 78999999999741 2345679999999987543 2 689999999999999999999999888889999999
Q ss_pred eccCCCCCCCccEEEE
Q 042071 585 ERDDILQKDDFGGQTC 600 (632)
Q Consensus 585 D~d~~~~~ddflGq~~ 600 (632)
|.+ ..+.+++||+++
T Consensus 71 ~~~-~~~~~~~iG~~~ 85 (85)
T PF00168_consen 71 DKD-SFGKDELIGEVK 85 (85)
T ss_dssp EET-SSSSEEEEEEEE
T ss_pred ECC-CCCCCCEEEEEC
Confidence 998 666799999874
No 127
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=1.9e-11 Score=128.51 Aligned_cols=96 Identities=29% Similarity=0.475 Sum_probs=81.9
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc-cEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL-ALLRI 581 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel-a~Lrf 581 (632)
..|+|+|..|.+|-. .|.++.+||||++.+...|.... |+||++++.++||+|||+|+|.+...+. ..|.+
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~s--KqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsi 251 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNES--KQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSI 251 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchh--hhhhhhhhhhcCccccceeEEecccccccceeEE
Confidence 458999999998863 34567789999999987665555 9999999999999999999999876554 57999
Q ss_pred EEEeccCCCCCCCccEEEEEeCcccC
Q 042071 582 EIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
+|||+| ..+++||.|...+.++.|.
T Consensus 252 EvWDWD-rTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 252 EVWDWD-RTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred EEeccc-ccccccccceecccHHHHh
Confidence 999999 8899999999999998875
No 128
>PLN03008 Phospholipase D delta
Probab=99.16 E-value=1.3e-10 Score=133.14 Aligned_cols=95 Identities=22% Similarity=0.422 Sum_probs=82.9
Q ss_pred CCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 528 SPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 528 s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
..+||||+|.+.+ .. ..||++++++.||+|||+|.|.+..+. ..|.|.|+|+| .++ +++||++.|||..|.
T Consensus 75 ~tSDPYV~I~Lg~----~r--v~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D-~~g-aD~IG~a~IPL~~L~ 145 (868)
T PLN03008 75 ITSDPYVTVVVPQ----AT--LARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDD-VFG-AQIIGTAKIPVRDIA 145 (868)
T ss_pred CCCCceEEEEECC----cc--eeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCC-ccC-CceeEEEEEEHHHcC
Confidence 4579999999943 22 569999999999999999999998875 58999999999 665 699999999999999
Q ss_pred CCc---eEEEccCCCCCccCCcccccc
Q 042071 608 QGI---RAVPLHDRKGNEYKKREASHV 631 (632)
Q Consensus 608 ~Gy---R~ipL~d~~g~~~~~~~~~~~ 631 (632)
+|. ++++|++..|++..+...+||
T Consensus 146 ~Ge~vd~Wl~Ll~~~~kp~k~~~kl~v 172 (868)
T PLN03008 146 SGERISGWFPVLGASGKPPKAETAIFI 172 (868)
T ss_pred CCCceEEEEEccccCCCCCCCCcEEEE
Confidence 995 799999999999998888876
No 129
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.16 E-value=1.6e-10 Score=108.68 Aligned_cols=112 Identities=16% Similarity=0.332 Sum_probs=88.8
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRI 581 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf 581 (632)
...|.|.|+.|++||. ..+|||+|.+.|. . ..||+++.++.||.|+|.|.|....+ ..-|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~~----~--vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v 71 (146)
T cd04013 10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDKT----L--YARTTSKLKTDTLFWGEHFEFSNLPP-VSVITV 71 (146)
T ss_pred EEEEEEEEEEccCCCC-----------cCCceEEEEECCE----E--EEEEEEEcCCCCCcceeeEEecCCCc-ccEEEE
Confidence 4569999999999973 1378999999763 1 35999999999999999999976443 466899
Q ss_pred EEEeccCCCC---CCCccEEEEEeCcccCCCc---eEEEccCCCCCc-------cCCcccccc
Q 042071 582 EIHERDDILQ---KDDFGGQTCLPVSELRQGI---RAVPLHDRKGNE-------YKKREASHV 631 (632)
Q Consensus 582 ~V~D~d~~~~---~ddflGq~~lpL~~L~~Gy---R~ipL~d~~g~~-------~~~~~~~~~ 631 (632)
.|+..++..+ ++++||.+.||+..|..|. +|.||.+.+|.+ ..+..++||
T Consensus 72 ~v~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lri 134 (146)
T cd04013 72 NLYRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRI 134 (146)
T ss_pred EEEEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEE
Confidence 9976542222 5789999999999999874 899999999997 566666654
No 130
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.14 E-value=1.8e-10 Score=105.67 Aligned_cols=100 Identities=23% Similarity=0.383 Sum_probs=77.9
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEI 583 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V 583 (632)
.|.|+|++|+.+.. +..+.+||||+|.+.+. . +.+|++++++.||+|||+|.|.+. +...|.|+|
T Consensus 3 ~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~--~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V 67 (125)
T cd04021 3 QLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----P--PKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKV 67 (125)
T ss_pred eEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----c--cEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEE
Confidence 58999999983321 22456899999998642 2 679999999999999999999875 346899999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC-------c-eEEEccCCC
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG-------I-RAVPLHDRK 619 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G-------y-R~ipL~d~~ 619 (632)
||++ ..+.+++||++.++|..+..+ + -+++|....
T Consensus 68 ~d~~-~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~ 110 (125)
T cd04021 68 WSHH-TLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSEN 110 (125)
T ss_pred EeCC-CCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccC
Confidence 9998 667899999999999998642 2 256776443
No 131
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.14 E-value=1.2e-10 Score=104.07 Aligned_cols=99 Identities=25% Similarity=0.328 Sum_probs=73.5
Q ss_pred EEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEE---cCC-ccEEEEEE
Q 042071 508 TLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLT---VPE-LALLRIEI 583 (632)
Q Consensus 508 ~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~---~pe-la~Lrf~V 583 (632)
-.++|++|+. .+..+.+||||+|.+.+... ....+++|++++++.||+|| +|.|.+. ..+ ...|+|+|
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~-~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V 76 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDG-TWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEV 76 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCC-CEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEE
Confidence 3568888863 24456789999999875321 11126899999999999999 6777643 222 36899999
Q ss_pred EeccCCCCCCCccEEEEEeCcccCCC-ceEEEc
Q 042071 584 HERDDILQKDDFGGQTCLPVSELRQG-IRAVPL 615 (632)
Q Consensus 584 ~D~d~~~~~ddflGq~~lpL~~L~~G-yR~ipL 615 (632)
||++ ..+++++||++.++++.|..+ -+.+.+
T Consensus 77 ~d~d-~~~~d~~iG~~~~~l~~l~~~~~~~~~~ 108 (110)
T cd04047 77 YDYD-SSGKHDLIGEFETTLDELLKSSPLEFEL 108 (110)
T ss_pred EEeC-CCCCCcEEEEEEEEHHHHhcCCCceEEe
Confidence 9999 777899999999999999854 344443
No 132
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.05 E-value=1e-09 Score=93.96 Aligned_cols=99 Identities=36% Similarity=0.618 Sum_probs=80.5
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|.|.|+.|+++... ......+|||++.+.+.. .. ..+|+++.++.||.|||+|.|.+..+....|.|.||
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~--~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~ 71 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KE--KKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVY 71 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cc--eEeeeEecCCCCCcccceEEEEecCcccCEEEEEEE
Confidence 68999999998741 122457999999997532 22 689999988889999999999988765678999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCCCceEEE
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQGIRAVP 614 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~GyR~ip 614 (632)
|.+ ..+.+.++|.+.+++..+..|+++.+
T Consensus 72 ~~~-~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 72 DKD-RFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred ecC-CccCCceeEEEEEEHHHcccCccccC
Confidence 988 45568899999999999999988754
No 133
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=98.98 E-value=1.4e-09 Score=97.49 Aligned_cols=85 Identities=19% Similarity=0.256 Sum_probs=69.6
Q ss_pred CCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCc
Q 042071 525 DACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVS 604 (632)
Q Consensus 525 d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~ 604 (632)
...+.+||||+|.+.+. . .++|++++++.||+|||+|.|.+..+....|.|.|+|++ .. ++++||.+.+||+
T Consensus 8 ~~~G~~dPYv~v~v~~~----~--~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~-~~-~d~~iG~~~v~L~ 79 (111)
T cd04052 8 SKTGLLSPYAELYLNGK----L--VYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDR-DR-HDPVLGSVSISLN 79 (111)
T ss_pred ccCCCCCceEEEEECCE----E--EEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECC-CC-CCCeEEEEEecHH
Confidence 34567899999999541 2 578999888999999999999987665567999999998 55 7999999999999
Q ss_pred ccC-C---CceEEEccC
Q 042071 605 ELR-Q---GIRAVPLHD 617 (632)
Q Consensus 605 ~L~-~---GyR~ipL~d 617 (632)
.+. . +.++++|.+
T Consensus 80 ~l~~~~~~~~~w~~L~~ 96 (111)
T cd04052 80 DLIDATSVGQQWFPLSG 96 (111)
T ss_pred HHHhhhhccceeEECCC
Confidence 873 2 367889875
No 134
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=98.97 E-value=4.2e-09 Score=94.77 Aligned_cols=99 Identities=21% Similarity=0.369 Sum_probs=72.6
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCcc--EEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELA--LLRIE 582 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela--~Lrf~ 582 (632)
|+|+|+.|.+|+.. +.+||||.|.+.+. . .++|+++++ .||.|||+|.|.+...++. .|.|.
T Consensus 2 L~v~vi~a~~l~~~---------~~~dpyv~v~~~~~----~--~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~ 65 (117)
T cd08383 2 LRLRILEAKNLPSK---------GTRDPYCTVSLDQV----E--VARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFY 65 (117)
T ss_pred eEEEEEEecCCCcC---------CCCCceEEEEECCE----E--eEecceEEC-CCCcccceEEEecCCccccEEEEEEE
Confidence 78999999999731 45799999998642 1 478999988 9999999999998765543 56777
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCCc-eEEEccCCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQGI-RAVPLHDRKG 620 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~Gy-R~ipL~d~~g 620 (632)
|||.+ ....+.++|.+.+....+..+. .|++|....+
T Consensus 66 v~d~~-~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~ 103 (117)
T cd08383 66 NKDKR-SKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDP 103 (117)
T ss_pred EEecc-cCCCeeEEEEEEecCcCCCCcceeEEECccCCC
Confidence 88876 4445666777665554444443 5788887655
No 135
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.96 E-value=1.9e-09 Score=118.28 Aligned_cols=104 Identities=22% Similarity=0.327 Sum_probs=85.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLR 580 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lr 580 (632)
..|+|+|+.|.+|+.. +..+.+||||++.+.. .... +++|+++++++||+|||+|.|.|...++ ..|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~--k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~ 236 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKG--KFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLH 236 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCC--cceeeeeecCcCCccccceEeecCHHHhccCEEE
Confidence 4599999999999842 2234589999999974 3434 8999999999999999999999876655 4799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc---eEEEccC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI---RAVPLHD 617 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d 617 (632)
|.|||+| .++++++||++.+||..+.... .|.+|.-
T Consensus 237 l~V~~~d-rfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~ 275 (421)
T KOG1028|consen 237 LSVYDFD-RFSRHDFIGEVILPLGEVDLLSTTLFWKDLQP 275 (421)
T ss_pred EEEEecC-CcccccEEEEEEecCccccccccceeeecccc
Confidence 9999999 8899999999999999887654 3555544
No 136
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=98.89 E-value=8.3e-09 Score=95.46 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=77.7
Q ss_pred EEEEEEecccccccCCCcccCCCC--CCCceeEEEEecCCCCCCCCccccCCCCCCCC--CccCcEEEEEEEc-------
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACS--PPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWV--PAWNKEFKFQLTV------- 573 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s--~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~n--P~WNEtf~F~v~~------- 573 (632)
|+|.|..+++++... .+..+ .+||||++.+.+. ... +++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~--kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~ 73 (133)
T cd08374 2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EED--KQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKI 73 (133)
T ss_pred EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--ccc--ccccceEEecCCCCcEEeEEEEEeeecCCcccee
Confidence 789999999976421 11223 3799999999875 222 789999999887 9999999998765
Q ss_pred --------------CCc--cEEEEEEEeccCCCCCCCccEEEEEeCcccCCCc
Q 042071 574 --------------PEL--ALLRIEIHERDDILQKDDFGGQTCLPVSELRQGI 610 (632)
Q Consensus 574 --------------pel--a~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy 610 (632)
.++ ..|.++|||.| ..+.|++||+..++|..|.+|.
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~lqvwD~D-~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 74 VVIKKEHFWSLDETEYKIPPKLTLQVWDND-KFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EEEeeccccccCcceEecCcEEEEEEEECc-ccCCCCcceEEEEEhhhccccc
Confidence 222 57999999999 8889999999999999998775
No 137
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.89 E-value=4.4e-09 Score=109.58 Aligned_cols=139 Identities=15% Similarity=0.225 Sum_probs=108.8
Q ss_pred CCCccccccccccccccccCCc--CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHH
Q 042071 111 MKAPLSHYFIYTGHNSYLTGNQ--LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETI 188 (632)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Q--l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI 188 (632)
=+.||++.-|-.|||++-...- -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... ..|.||++.|
T Consensus 6 d~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~--~~~l~~~Hg~~~~~-~~~~dvL~~i 82 (279)
T cd08586 6 DDTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID--NNDLAIHHGPFYQG-LTFGDVLNEC 82 (279)
T ss_pred CCCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC--CCeEEEEccCcccc-CcHHHHHHHH
Confidence 3789999999999998754322 34566667788899999999999999875 57899999976555 8999999999
Q ss_pred hhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCC--cCCCCCCChhhccCcEEEecC
Q 042071 189 KNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDS--ECLKEFPSPESLKGKIIISTK 255 (632)
Q Consensus 189 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~--~~~~~lPSP~~Lk~KILIK~K 255 (632)
+++--..-.-.|||+|..+++... -.+-+.++|.+.+..+... -....+|+..|+||||++-.+
T Consensus 83 ~~FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 83 YSFLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 998776667889999999998864 3334556666666554311 124689999999999999865
No 138
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.81 E-value=1.2e-08 Score=105.66 Aligned_cols=139 Identities=19% Similarity=0.310 Sum_probs=105.5
Q ss_pred CCCCccccccccccccccccCCcC--CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccc-cccHHHHHH
Q 042071 110 DMKAPLSHYFIYTGHNSYLTGNQL--NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTA-PVDLTTCLE 186 (632)
Q Consensus 110 DM~~PLs~YfI~SSHNTYL~g~Ql--~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs-~i~f~dvi~ 186 (632)
--++||++|.+-.+||+|..+..- .+...--.....|..|.|-++||++... ++..++||..... ..+|.||++
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~---~~~~lcH~~~~~~~~~~~~d~L~ 83 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN---GGLRLCHSVCGLGDGGPLSDVLR 83 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC---CCEEEECCCccccCCccHHHHHH
Confidence 357999999999999999887642 3333334567889999999999999864 6799999975543 789999999
Q ss_pred HHhhcccccCCCc-eEEEeccCCCHHHHHHHHHHHH-HHhccccCCCCCCc-CCCCCCChhhcc--CcEEEe
Q 042071 187 TIKNYAFDASEYP-VVITFEDHLPPHLQGEVAALLT-RIFDKEILLPDDSE-CLKEFPSPESLK--GKIIIS 253 (632)
Q Consensus 187 aI~~~AF~~S~yP-vILSlE~Hcs~~qQ~~mA~il~-~ifGd~L~~~~~~~-~~~~lPSP~~Lk--~KILIK 253 (632)
.|+++.= +.|.- |||.||++.+...+ ..+.+++ ..||+.+|.|+... ....+|++++|. ||-||-
T Consensus 84 ~i~~fL~-~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 84 EVVDFLD-ANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHHHH-hCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 9999863 44554 88999999987764 3344443 68999999886322 246799999999 554443
No 139
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=98.81 E-value=2.8e-08 Score=84.42 Aligned_cols=90 Identities=33% Similarity=0.588 Sum_probs=73.2
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|.|.|++|++++.. ......+|||.+.+.+ .. ..+|.++.++.||.||+.|.|.+.......|.|.|+
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~--~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~ 68 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQ--KFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVW 68 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----Cc--eEecceeCCCCCCcccceEEEEccCCCCCEEEEEEE
Confidence 46889999988642 1234579999999975 12 679999988899999999999987745567999999
Q ss_pred eccCCCCCCCccEEEEEeCcccC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
+.+ ....+.++|++.+++..+.
T Consensus 69 ~~~-~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 69 DKD-RFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred ecC-CCCCCceeEEEEEeHHHhh
Confidence 988 5555889999999999987
No 140
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.80 E-value=5.6e-09 Score=114.02 Aligned_cols=92 Identities=24% Similarity=0.451 Sum_probs=75.3
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..++++|++||+|.- .|..+.+||||.+.+... |+||++|..++||+|||.|.|.+... ...|++.
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~kt-------krrtrti~~~lnpvw~ekfhfechns-tdrikvr 360 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVGKT-------KRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVR 360 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeeccc-------chhhHhhhhccchhhhhheeeeecCC-CceeEEE
Confidence 458999999999863 344577899999998532 78999999999999999999999765 3579999
Q ss_pred EEeccCCC----------CCCCccEEEEEeCcccCC
Q 042071 583 IHERDDIL----------QKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 583 V~D~d~~~----------~~ddflGq~~lpL~~L~~ 608 (632)
|||+|+.. ..|||+||..|-+..|..
T Consensus 361 vwded~dlksklrqkl~resddflgqtvievrtlsg 396 (1283)
T KOG1011|consen 361 VWDEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSG 396 (1283)
T ss_pred EecCcccHHHHHHHHhhhcccccccceeEEEEeccc
Confidence 99988411 458999999999888753
No 141
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=98.80 E-value=1.2e-08 Score=126.95 Aligned_cols=104 Identities=16% Similarity=0.326 Sum_probs=83.8
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc-cEEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL-ALLR 580 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel-a~Lr 580 (632)
.+.|+|+|++|+++.. .++.+||||.|.+... . ++||+++++|.||+|||+|+|.+..|.. ..|.
T Consensus 1979 ~G~L~V~V~~a~nl~~--------~~~~sdPyv~l~~g~~----~--~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ 2044 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLKQ--------SMGNTNAFCKLTLGNG----P--PRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLH 2044 (2102)
T ss_pred CcceEEEEeecccccc--------ccCCCCCeEEEEECCC----C--cccccccCCCCCCCcccceeeeecCCCCCCceE
Confidence 4679999999999852 2456899999998632 1 6799999999999999999999987754 4599
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc---eEEEccC---CCCC
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI---RAVPLHD---RKGN 621 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d---~~g~ 621 (632)
|+|||+| .++ ++.+|.+.|++.++..+- -+++|.+ +.|.
T Consensus 2045 iev~d~d-~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~ 2089 (2102)
T PLN03200 2045 ISCKSKN-TFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGS 2089 (2102)
T ss_pred EEEEecC-ccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCC
Confidence 9999999 664 558999999999987543 4678886 4555
No 142
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=4e-08 Score=107.97 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=77.1
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc--cEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALL 579 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~L 579 (632)
...|+|.|+.|++|+. .+..+..||||++.+.... ....|+||.+.+++.||+|||+|.|.|....+ +.|
T Consensus 297 ~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~--~~~~kkkT~~~~~~~npv~nesf~F~vp~~~l~~~~l 368 (421)
T KOG1028|consen 297 AGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGD--KRLSKKKTSVKKKTLNPVFNETFVFDVPPEQLAEVSL 368 (421)
T ss_pred CCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCC--ceeeeeeeecccCCCCCcccccEEEeCCHHHhheeEE
Confidence 4569999999999973 2444667999999987532 22337899999999999999999998875554 469
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSE 605 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~ 605 (632)
.++|||+| ..+.+++||++++....
T Consensus 369 ~l~V~d~d-~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 369 ELTVWDHD-TLGSNDLIGRCILGSDS 393 (421)
T ss_pred EEEEEEcc-cccccceeeEEEecCCC
Confidence 99999999 78889999998887766
No 143
>PLN02270 phospholipase D alpha
Probab=98.67 E-value=7.1e-08 Score=110.90 Aligned_cols=120 Identities=18% Similarity=0.297 Sum_probs=95.6
Q ss_pred eEEEEEEEecccccccC-C--------C--cccC-CCCCCCceeEEEEecCCCCCCCCccccCCCCCC-CCCccCcEEEE
Q 042071 503 TTLKVTLYSGEGWDKEF-H--------H--TYFD-ACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDS-WVPAWNKEFKF 569 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~-~--------~--~~~d-~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn-~nP~WNEtf~F 569 (632)
.+|.|+|+.|.+|+... . . ..+. ....+||||.|.+.+. . ..||+++.|. .||+|||.|.+
T Consensus 8 g~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~a----~--v~rtr~~~~~~~~p~w~e~f~i 81 (808)
T PLN02270 8 GTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEKA----R--VGRTRKIENEPKNPRWYESFHI 81 (808)
T ss_pred cceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCCc----E--EEEEeecCCCCCCCccccceEE
Confidence 56899999999987420 0 0 0000 1135699999999752 2 5799999886 69999999999
Q ss_pred EEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCCCCccCCcccccc
Q 042071 570 QLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRKGNEYKKREASHV 631 (632)
Q Consensus 570 ~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~g~~~~~~~~~~~ 631 (632)
.+..+- +-|.|.|+|.| .. ...+||.+.||+..|..| -+++|+++.+|+++.+.+++||
T Consensus 82 ~~ah~~-~~v~f~vkd~~-~~-g~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~ 143 (808)
T PLN02270 82 YCAHMA-SNIIFTVKDDN-PI-GATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHV 143 (808)
T ss_pred eeccCc-ceEEEEEecCC-cc-CceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEE
Confidence 998774 78999999998 55 467999999999999988 3899999999999999888876
No 144
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.66 E-value=4.5e-08 Score=114.27 Aligned_cols=104 Identities=26% Similarity=0.391 Sum_probs=89.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|+|.+++|++|+- .+..+.+||||++.+.+- . -++|++++.++||+|||.|..+|.+.....+.+.
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~k----~--vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~ 1107 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNEK----S--VYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTIN 1107 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecce----e--cccccchhccCCCCccccceEeeeccccceEEEE
Confidence 348899999999973 466677899999999762 1 5899999999999999999999998878889999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCCc---eEEEccCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQGI---RAVPLHDRK 619 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~Gy---R~ipL~d~~ 619 (632)
|+|+| ...+++.||++.++|..|.+|. -.|||-.+.
T Consensus 1108 v~Dwd-~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1108 VNDWD-SGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred Eeecc-cCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 99999 7889999999999999999874 457776655
No 145
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.51 E-value=4.1e-08 Score=108.92 Aligned_cols=98 Identities=18% Similarity=0.330 Sum_probs=77.2
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc----CCccE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV----PELAL 578 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~----pela~ 578 (632)
.+|.|.|+.|.++- ..|.++.+||||.|++.....-.....+||+|++.++||+|+|+|+|.|.. .+.|+
T Consensus 947 q~L~veVlhA~dii------pLD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDII------PLDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhcccccc------ccCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 45778888888764 246678899999999864211111126899999999999999999999863 24689
Q ss_pred EEEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 579 LRIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 579 Lrf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
|.|+|+|+| ....+||.|++.+.|..+.
T Consensus 1021 ~~FTVMDHD-~L~sNDFaGEA~L~Lg~vp 1048 (1103)
T KOG1328|consen 1021 LHFTVMDHD-YLRSNDFAGEAFLELGDVP 1048 (1103)
T ss_pred EEEEeeccc-eecccccchHHHHhhCCCC
Confidence 999999999 8889999999998887763
No 146
>PLN02352 phospholipase D epsilon
Probab=97.94 E-value=3.3e-05 Score=89.15 Aligned_cols=112 Identities=15% Similarity=0.261 Sum_probs=82.8
Q ss_pred ceEEEEEEEecccccccCCC-cccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHH-TYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLR 580 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~-~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lr 580 (632)
-.+|.++|+.|..+...+.. ..+. ...||||+|.+.+. . ..|| .+.-||+|||+|...+..+-.+-|.
T Consensus 9 hg~l~~~i~~~~~~~~~~~~~~~~~--~~~~~y~tv~~~~~----~--v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~ 77 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPFNCIFL--NGKATYVTIKIGNK----K--VAKT---SHEYDRVWNQTFQILCAHPLDSTIT 77 (758)
T ss_pred ccceEEEEEEeeehhhccccccccc--CCCCceEEEEeCCc----E--EecC---CCCCCCccccceeEEeeeecCCcEE
Confidence 35689999998733211110 0111 12399999999752 1 4577 4446999999999999877546799
Q ss_pred EEEEeccCCCCCCCccEEEEEeCcccCCCc----eEEEccCCCCCccCCcccccc
Q 042071 581 IEIHERDDILQKDDFGGQTCLPVSELRQGI----RAVPLHDRKGNEYKKREASHV 631 (632)
Q Consensus 581 f~V~D~d~~~~~ddflGq~~lpL~~L~~Gy----R~ipL~d~~g~~~~~~~~~~~ 631 (632)
|.|+|. ..+||.+.+|+..|..|- +++|+++.+|+++.+ .++||
T Consensus 78 f~vk~~------~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~-~~~~~ 125 (758)
T PLN02352 78 ITLKTK------CSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPE-LKLRF 125 (758)
T ss_pred EEEecC------CeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCC-CEEEE
Confidence 999882 578999999999998883 699999999999977 77665
No 147
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.94 E-value=3.3e-05 Score=85.23 Aligned_cols=106 Identities=21% Similarity=0.290 Sum_probs=82.8
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEE---cCCccEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLT---VPELALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~---~pela~L 579 (632)
..++|+|+.|.+|.+. + .+.-.|||+|.|.|......++|+.|++..||+.|.+||+|.|-+. .|+---|
T Consensus 1125 hkvtvkvvaandlkwq---t----sgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ---T----SGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch---h----ccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 4589999999988752 1 2334679999999864433345788999999999999999999876 3666679
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCC-Cc--eEEEcc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQ-GI--RAVPLH 616 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~-Gy--R~ipL~ 616 (632)
.|.|+|+. ....|..+|-+.++|.++.. |- .|+||-
T Consensus 1198 ~~~VKDYC-FAReDRvvGl~VlqL~~va~kGS~a~W~pLg 1236 (1283)
T KOG1011|consen 1198 QFCVKDYC-FAREDRVVGLAVLQLRSVADKGSCACWVPLG 1236 (1283)
T ss_pred EEeehhhe-eecccceeeeeeeehhhHhhcCceeEeeecc
Confidence 99999998 55667899999999999853 52 577874
No 148
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=97.88 E-value=3.4e-05 Score=90.86 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=73.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|.|+|.+|.++... ..-..+.+|||+.+...+ .. ..||+++++.+||+|||+|-..+..-+ .-|.+.
T Consensus 436 GVv~vkI~sa~~lk~~----d~~i~~~vDpyit~~~~~----r~--~gkT~v~~nt~nPvwNEt~Yi~lns~~-d~L~Ls 504 (1227)
T COG5038 436 GVVEVKIKSAEGLKKS----DSTINGTVDPYITVTFSD----RV--IGKTRVKKNTLNPVWNETFYILLNSFT-DPLNLS 504 (1227)
T ss_pred EEEEEEEeeccCcccc----cccccCCCCceEEEEecc----cc--CCccceeeccCCccccceEEEEecccC-CceeEE
Confidence 5689999999998632 112456689999999764 23 569999999999999999987775221 358999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
|||.+ ....|+.+|.+.++|..|.
T Consensus 505 lyD~n-~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 505 LYDFN-SFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred EEecc-ccCCcceeeeEEechHHhh
Confidence 99977 5677999999999988875
No 149
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=97.88 E-value=1.8e-05 Score=69.65 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=62.9
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIH 584 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~ 584 (632)
|+|+|.+++++... ......+.+||||.|.+.+ .. +.||++. -||.|||+|.|.|. ...-+.|.||
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~--kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~Vy 66 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VE--RARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVY 66 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EE--EEeccCC---CCCcccceEEEEec--CCcEEEEEEE
Confidence 57889999887531 1111345689999999865 23 6788874 68999999999994 2457999999
Q ss_pred eccCCCCCCCccEEEEEeCcccCC
Q 042071 585 ERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 585 D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
|.. ....--+|..-++++.|..
T Consensus 67 Dk~--~~~~~Pi~llW~~~sdi~E 88 (109)
T cd08689 67 DKG--GDQPVPVGLLWLRLSDIAE 88 (109)
T ss_pred eCC--CCeecceeeehhhHHHHHH
Confidence 976 2334457887788777644
No 150
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.68 E-value=9.9e-05 Score=82.87 Aligned_cols=104 Identities=20% Similarity=0.371 Sum_probs=80.4
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|.|+|..|++||- .+..+..|||+.|.+.. .. ..||.+|..++.|.|.|+|.|.+.. ....|.|=
T Consensus 5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD~----E~--v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fY 71 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLDQ----EE--VCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFY 71 (800)
T ss_pred cceeEEEeecccCCC------CCCCCCcCcceEEeecc----hh--hhhhhhhhhhcCCccccceEEecCc-ceeeEEEE
Confidence 458999999999983 24456689999999864 22 6899999999999999999998853 35678999
Q ss_pred EEeccCCCCCCCccEEEEEeCcccC-----CCceEEEccCCCCC
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELR-----QGIRAVPLHDRKGN 621 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~-----~GyR~ipL~d~~g~ 621 (632)
|||.| .++|+.||.++|.-..|. .+|-++.=.|++-+
T Consensus 72 v~D~d--~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsE 113 (800)
T KOG2059|consen 72 VWDRD--LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSE 113 (800)
T ss_pred Eeccc--cccccccceeeeeHHHHhhCCCCccceeccccCCChh
Confidence 99999 688999999999766653 23445555555444
No 151
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.52 E-value=0.00066 Score=70.84 Aligned_cols=137 Identities=23% Similarity=0.256 Sum_probs=96.2
Q ss_pred CCccccccccccccccccCCcCC---------CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHH
Q 042071 112 KAPLSHYFIYTGHNSYLTGNQLN---------SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLT 182 (632)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~ 182 (632)
+.||++=+|--|||+.-.+-... +..--.....-|..|.|-+.|.|.-.++.+++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 56899999999999875432211 11111234567889999999999654312366788888542 28999
Q ss_pred HHHHHHhhcccccCCCceEEEeccCCC------HHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhc--cCcEEEec
Q 042071 183 TCLETIKNYAFDASEYPVVITFEDHLP------PHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESL--KGKIIIST 254 (632)
Q Consensus 183 dvi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~L--k~KILIK~ 254 (632)
+|++.|+++.=.. .=-|||.+ .|.. +++-..+.++|.+.||+.|+.|.. ....-|+.++| +||.+|-.
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~--~~~~~~TL~~l~~~gkrViv~ 159 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR--NYGWGPTLSEIWARRKRVIIC 159 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc--cccccCcHHHHHhcCCEEEEE
Confidence 9999999975444 55678877 4543 577788999999999999997652 23456899996 56665543
No 152
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.39 E-value=0.00026 Score=73.45 Aligned_cols=104 Identities=21% Similarity=0.297 Sum_probs=78.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCcc--EEEEE
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELA--LLRIE 582 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela--~Lrf~ 582 (632)
|.|+++....+. +.|..+.+||||.+.+. |+-..+.++||.+.+++.||+||+.|.|.+...+|+ -+.+.
T Consensus 235 l~vt~iRc~~l~------ssDsng~sDpyvS~~l~--pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~ls 306 (362)
T KOG1013|consen 235 LIVTIIRCSHLA------SSDSNGYSDPYVSQRLS--PDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALS 306 (362)
T ss_pred eEEEEEEeeeee------ccccCCCCCccceeecC--CCcchhhcccCcchhccCCccccccccccCCccchhcceEEEe
Confidence 677887765443 35667788999999886 333333478999999999999999999999888886 47889
Q ss_pred EEeccCCCCCCCccEEEEEeCcccCCCceEEEccCCCCCcc
Q 042071 583 IHERDDILQKDDFGGQTCLPVSELRQGIRAVPLHDRKGNEY 623 (632)
Q Consensus 583 V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~d~~g~~~ 623 (632)
|||++ ....++++|-. ...+||--++++..|.++
T Consensus 307 vgd~~-~G~s~d~~GG~------~~g~~rr~~v~~h~gr~~ 340 (362)
T KOG1013|consen 307 VGDYD-IGKSNDSIGGS------MLGGYRRGEVHKHWGRCL 340 (362)
T ss_pred ecccC-CCcCccCCCcc------cccccccchhhcCccccc
Confidence 99998 55467777742 234677777888777765
No 153
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=97.36 E-value=0.00026 Score=77.55 Aligned_cols=103 Identities=22% Similarity=0.362 Sum_probs=81.0
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcE-EEEEEEcCCcc--EE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKE-FKFQLTVPELA--LL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEt-f~F~v~~pela--~L 579 (632)
.+|.|+|..|+.||...+.. ...|.||+|.+... .+||.+..+.+||.||.. |.|.|...++. -|
T Consensus 3 gkl~vki~a~r~lpvmdkas-----d~tdafveik~~n~-------t~ktdvf~kslnp~wnsdwfkfevddadlqdepl 70 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDKAS-----DLTDAFVEIKFANT-------TFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPL 70 (1169)
T ss_pred CcceeEEEeccCCccccccc-----ccchheeEEEeccc-------ceehhhhhhhcCCcccccceEEecChhhhccCCe
Confidence 34889999999999653321 23578999998653 789999999999999955 99999877663 59
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccC----------CC---ceEEEccCC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELR----------QG---IRAVPLHDR 618 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~----------~G---yR~ipL~d~ 618 (632)
.+++.|+| ..+.+|-||.+.|.++-|. .| --|+|++|.
T Consensus 71 qi~lld~d-tysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdt 121 (1169)
T KOG1031|consen 71 QIRLLDHD-TYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDT 121 (1169)
T ss_pred eEEEeccc-ccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeeccee
Confidence 99999999 7788999999999988763 12 247888874
No 154
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.33 E-value=0.00076 Score=76.00 Aligned_cols=77 Identities=23% Similarity=0.403 Sum_probs=62.5
Q ss_pred CCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcC---------------CccEEEEEEEeccCCCCC
Q 042071 528 SPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVP---------------ELALLRIEIHERDDILQK 592 (632)
Q Consensus 528 s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~p---------------ela~Lrf~V~D~d~~~~~ 592 (632)
+..|||++|...|.-.. . ..+|++++.+-+|.|||.|.|.+..+ ++.-|++.+|++......
T Consensus 149 ~~~dp~~~v~~~g~~~~-~--~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~ 225 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKL-K--EKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVIN 225 (800)
T ss_pred CCCCcceEEeecccchh-h--ccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhh
Confidence 44799999999874222 1 36899999999999999999998876 566789999994325566
Q ss_pred CCccEEEEEeCcccC
Q 042071 593 DDFGGQTCLPVSELR 607 (632)
Q Consensus 593 ddflGq~~lpL~~L~ 607 (632)
++|+|+..+|+..++
T Consensus 226 ~~FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 226 DVFLGEVRVPVDVLR 240 (800)
T ss_pred hhhceeEEeehhhhh
Confidence 999999999999987
No 155
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.30 E-value=0.00022 Score=83.76 Aligned_cols=96 Identities=20% Similarity=0.310 Sum_probs=75.6
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEE-EEcCCc--cEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQ-LTVPEL--ALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~-v~~pel--a~L 579 (632)
.+|+|-|..+++|+.- .-...|||||+..+...|.... |+||++++++.||.|||.+.+. +....+ ..|
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~s--KRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReL 1595 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTS--KRKTKVVRKTRNPTFNEMLVYDGFPKEILQQREL 1595 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhh--hhhhccccccCCCchhhheeecCCchhhhhhhee
Confidence 4578888888888542 1224589999999987766666 8999999999999999999987 332222 468
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
.+.||..+ ....+.|+|.+++||..+.
T Consensus 1596 Q~sVls~~-~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1596 QVSVLSNG-GLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeeeeccc-ceeeeeeeeeeecchhhcc
Confidence 99999988 6667899999999998764
No 156
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.23 E-value=0.0023 Score=67.18 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=94.1
Q ss_pred CCccccccccccccccccCCcCCC---------------------CCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEE
Q 042071 112 KAPLSHYFIYTGHNSYLTGNQLNS---------------------KCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVC 170 (632)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~ 170 (632)
+.||.+..|--|||+.--+-.-.+ ..--.....=|..|+|-+.|++.-.+..+++-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 579999999999997643211111 11111235567899999999995433123567888
Q ss_pred ecccccccccHHHHHHHHhhcccccCCCceEEEecc-----CCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhh
Q 042071 171 HGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFED-----HLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPES 245 (632)
Q Consensus 171 HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~ 245 (632)
||--- -.+|.+|++.|+++.=....=-|||.++. +++.++-..+.+.|.++||+.++.+. ....-|+.++
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~tL~~ 160 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPRD---SDLLDVTLAD 160 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCCc---cccCCCcHHH
Confidence 88422 28899999999997443334458888863 33457788888999999999999652 1235678999
Q ss_pred cc--CcEEEe
Q 042071 246 LK--GKIIIS 253 (632)
Q Consensus 246 Lk--~KILIK 253 (632)
|. ||-+|-
T Consensus 161 l~~~gk~viv 170 (288)
T cd08587 161 LWESGKRVIV 170 (288)
T ss_pred HHhCCCeEEE
Confidence 98 775443
No 157
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.96 E-value=0.00019 Score=80.61 Aligned_cols=59 Identities=25% Similarity=0.508 Sum_probs=48.5
Q ss_pred cccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEEeccCCC--------------------------------CC---CC
Q 042071 550 DQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIHERDDIL--------------------------------QK---DD 594 (632)
Q Consensus 550 ~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~--------------------------------~~---dd 594 (632)
+-|.+.+.++||.|+|.|.|.|..-.-..+.+-+||+|+.. +. ||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 56777788999999999999997655567999999998522 22 89
Q ss_pred ccEEEEEeCcccCC
Q 042071 595 FGGQTCLPVSELRQ 608 (632)
Q Consensus 595 flGq~~lpL~~L~~ 608 (632)
|+|...|||..+.+
T Consensus 259 FLGciNipl~EiP~ 272 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPP 272 (1103)
T ss_pred cccccccchhcCCc
Confidence 99999999999864
No 158
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.95 E-value=0.0025 Score=61.81 Aligned_cols=64 Identities=25% Similarity=0.311 Sum_probs=53.6
Q ss_pred cCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCCCH
Q 042071 132 QLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHLPP 210 (632)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 210 (632)
+...+-|.++|..|+..||++||+|+.=-. ||.|||.|- -.+|+||++..++ -+.|.||.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tk--Dg~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTK--DGVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcC--CCCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 345689999999999999999999999766 689999998 7789999998876 356777766654
No 159
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.90 E-value=0.0039 Score=63.19 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=36.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
.-+-|.++|..|+..||++||+|++=-. ||.|||.|-.||
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTk--Dg~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTK--DGELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEcc--CCCEEEecCCcc
Confidence 4578999999999999999999999776 789999999887
No 160
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=96.88 E-value=0.0026 Score=58.10 Aligned_cols=73 Identities=21% Similarity=0.374 Sum_probs=55.2
Q ss_pred CCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---------------CCccEEEEEEEeccCCC----
Q 042071 530 PDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---------------PELALLRIEIHERDDIL---- 590 (632)
Q Consensus 530 ~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---------------pela~Lrf~V~D~d~~~---- 590 (632)
.++||+|.+.-+|..+ .++|+++.++|-|.|+..++|.+.. -+.+-+.|+||... ..
T Consensus 33 VN~yv~i~lSFl~~~e---~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~-~~s~~~ 108 (143)
T cd08683 33 VNSYVTIHLSFLPEKE---LRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRN-PKSAGD 108 (143)
T ss_pred cceEEEEEeccCCCCc---eeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecC-Cccccc
Confidence 5789999988776655 5899999999999999999998641 12256899999865 11
Q ss_pred ------CCCCccEEEEEeCccc
Q 042071 591 ------QKDDFGGQTCLPVSEL 606 (632)
Q Consensus 591 ------~~ddflGq~~lpL~~L 606 (632)
.+|-.||.+.||+..|
T Consensus 109 ~~~~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 109 TIKIETSGDILLGTVKIPLRDL 130 (143)
T ss_pred eeccCcCCcEEEEEEEeeHHHH
Confidence 2234678888888776
No 161
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.87 E-value=0.0029 Score=63.75 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=36.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
.-+-|.+||..|+..|+.+||+|++=-. ||.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~Tk--Dg~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSG--DGTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECC--CCCEEEEcCCCC
Confidence 4577899999999999999999999877 799999998876
No 162
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=96.73 E-value=0.015 Score=61.31 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=88.6
Q ss_pred CCcccccccccccccc--ccC-CcCCCC------------------------CChHHHHHHHhCCCcEEEEeecCCCCCC
Q 042071 112 KAPLSHYFIYTGHNSY--LTG-NQLNSK------------------------CSAGPIKDALKRGLRGIELDLWPSSKKK 164 (632)
Q Consensus 112 ~~PLs~YfI~SSHNTY--L~g-~Ql~g~------------------------SS~e~Y~~aL~~GCRcvElDcWdG~~~~ 164 (632)
+.||.+..|--|||+- -+. +.-.|. .--.....-|..|.|-+.|.+--.+ ++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~-~~ 85 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKP-KD 85 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccC-CC
Confidence 4799999999999963 222 111111 1111234567899999999996433 14
Q ss_pred CCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCC---CHHHHHHHHHHHHHHhccccCCCCCCcCCCCCC
Q 042071 165 DGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHL---PPHLQGEVAALLTRIFDKEILLPDDSECLKEFP 241 (632)
Q Consensus 165 ~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lP 241 (632)
++-.++||-. + .++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+. . ...-|
T Consensus 86 ~~~~~~Hg~~--~-~~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~-~--~~~~~ 158 (290)
T cd08616 86 NDLYFVHGLY--G-ILVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRD-P--DLLNV 158 (290)
T ss_pred CcEEEEEecc--c-hhHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCC-C--CcCcC
Confidence 6788999842 2 299999999999743333345788875 44 334456788899999999998443 2 12347
Q ss_pred Chhhcc--C-cEEEec
Q 042071 242 SPESLK--G-KIIIST 254 (632)
Q Consensus 242 SP~~Lk--~-KILIK~ 254 (632)
+.++|. | +|||-.
T Consensus 159 tL~~l~~~~krVIi~y 174 (290)
T cd08616 159 TLEYLWEKGYQVIVFY 174 (290)
T ss_pred cHHHHHhCCCEEEEEE
Confidence 899997 3 355544
No 163
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=96.71 E-value=0.0046 Score=62.57 Aligned_cols=41 Identities=27% Similarity=0.364 Sum_probs=36.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
..-+.|.+||.+|+..||++||+|++=-. ||.|||.|-.||
T Consensus 12 ~~pENT~~Af~~A~~~g~~~vE~DV~~Tk--Dg~~Vv~HD~~l 52 (230)
T cd08563 12 TAPENTLLAFKKAIEAGADGIELDVHLTK--DGQLVVIHDETV 52 (230)
T ss_pred CCCchhHHHHHHHHHcCCCEEEEEeeEcC--CCCEEEECCCCc
Confidence 34678999999999999999999999876 789999998776
No 164
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.69 E-value=0.0044 Score=62.27 Aligned_cols=41 Identities=17% Similarity=0.207 Sum_probs=36.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
..-+.|.+||..|+..||.+||+|++=-. ||.|||.|-.||
T Consensus 10 ~~pENT~~af~~A~~~Gad~vE~DV~~T~--Dg~~vv~HD~~l 50 (220)
T cd08579 10 NGVENTLEALEAAIKAKPDYVEIDVQETK--DGQFVVMHDANL 50 (220)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeeEcC--CCCEEEEcCCch
Confidence 34578899999999999999999999876 789999999886
No 165
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.59 E-value=0.0024 Score=64.48 Aligned_cols=42 Identities=26% Similarity=0.323 Sum_probs=34.2
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
...+.|.++|+.|+..|+++||+|||=-. ||.|||+|..+|-
T Consensus 7 ~~pENTl~af~~A~~~G~~~iE~Dv~lTk--Dg~~Vv~HD~~l~ 48 (256)
T PF03009_consen 7 NAPENTLAAFRAAIELGADGIELDVQLTK--DGVPVVFHDDTLD 48 (256)
T ss_dssp TSSTTSHHHHHHHHHTTSSEEEEEEEE-T--TS-EEE-SSSBST
T ss_pred CChhhHHHHHHHHHHhCCCeEcccccccC--CceeEeccCCeee
Confidence 34589999999999999999999999877 7999999987543
No 166
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=96.48 E-value=0.015 Score=55.28 Aligned_cols=105 Identities=19% Similarity=0.212 Sum_probs=69.5
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---CCccEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---PELALLR 580 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---pela~Lr 580 (632)
.++|+|.+..+... ......+.||++.+........ ....|+.+...-++.|||.++|++.. |..|.|.
T Consensus 9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~-~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~ 80 (156)
T cd08380 9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLC-PPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLC 80 (156)
T ss_pred CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEcc-CceeccCCcCCCCCcccceeEccchhhcCChhheEE
Confidence 37788877766542 0112356788888763211111 13344444333579999999998764 4458999
Q ss_pred EEEEeccCCCC--CCCccEEEEEeCcc----cCCCceEEEccC
Q 042071 581 IEIHERDDILQ--KDDFGGQTCLPVSE----LRQGIRAVPLHD 617 (632)
Q Consensus 581 f~V~D~d~~~~--~ddflGq~~lpL~~----L~~GyR~ipL~d 617 (632)
|+||+.+ ... ....||++.+||-. |++|...+.|.-
T Consensus 81 itl~~~~-~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW~ 122 (156)
T cd08380 81 LSIYAVS-EPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLWP 122 (156)
T ss_pred EEEEEEe-cCCCCcceEEEEEeEEeEcccCcEecCCEEEeccC
Confidence 9999976 322 35789999999865 788999998874
No 167
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=96.47 E-value=0.017 Score=55.32 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=68.5
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---CCccEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---PELALLR 580 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---pela~Lr 580 (632)
.++|+|+++.++... ...|.||++.+........ ....|+.+.- -++.|||-++|+|.. |..|.|.
T Consensus 9 ~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~-~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 9 NLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLC-DNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEcc-CeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 488999999887631 1247799998863211110 0223443332 468999999999875 4458999
Q ss_pred EEEEeccCCCC---CCCccEEEEEeCcc----cCCCceEEEccCC
Q 042071 581 IEIHERDDILQ---KDDFGGQTCLPVSE----LRQGIRAVPLHDR 618 (632)
Q Consensus 581 f~V~D~d~~~~---~ddflGq~~lpL~~----L~~GyR~ipL~d~ 618 (632)
|+||+..+..+ ....+|++.++|-. |++|-..+.|.-.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW~~ 122 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPV 122 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEEcC
Confidence 99999762111 12468999999865 7889877776653
No 168
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=96.47 E-value=0.0021 Score=74.91 Aligned_cols=94 Identities=20% Similarity=0.314 Sum_probs=75.2
Q ss_pred CcceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEE
Q 042071 500 PVKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALL 579 (632)
Q Consensus 500 p~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~L 579 (632)
|+...++|-|..|.+|.. .|..+..||||.|.+.+. .. ..++..+.+++||+|++-|++....|-...+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~--~d~~~yip~tlnPVfgkmfel~~~lp~ek~l 678 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RT--LDRAHYIPNTLNPVFGKMFELECLLPFEKDL 678 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hh--hhhhhcCcCCCCcHHHHHHHhhcccchhhcc
Confidence 445556788888888753 355677899999998652 11 3567788999999999999999888877889
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSE 605 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~ 605 (632)
.+.|+|+| ..+.++.+|+..+.|..
T Consensus 679 ~v~vyd~D-~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 679 IVEVYDHD-LEAQDEKIGETTIDLEN 703 (1105)
T ss_pred eeEEEEee-cccccchhhceehhhhh
Confidence 99999999 67789999999988764
No 169
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=96.46 E-value=0.017 Score=56.17 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=69.5
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---CCccEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---PELALLR 580 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---pela~Lr 580 (632)
.++|+|+++.++.. .....+.||++.+......-. ....|+.+.-+-.+.|||.++|+|.. |..|.|.
T Consensus 9 ~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~-~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 9 KFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLC-KTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEcc-CceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 48999999998863 012246688888763111111 13355554434569999999998764 5558999
Q ss_pred EEEEeccCCC---------------CCCCccEEEEEeCcc----cCCCceEEEccC
Q 042071 581 IEIHERDDIL---------------QKDDFGGQTCLPVSE----LRQGIRAVPLHD 617 (632)
Q Consensus 581 f~V~D~d~~~---------------~~ddflGq~~lpL~~----L~~GyR~ipL~d 617 (632)
|.||+..... .....||++.++|-. |+.|...+.|.-
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW~ 135 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMWT 135 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEecC
Confidence 9999975111 013579999999865 778987777754
No 170
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.45 E-value=0.00076 Score=70.11 Aligned_cols=99 Identities=20% Similarity=0.320 Sum_probs=74.8
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC---ccEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE---LALL 579 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe---la~L 579 (632)
..+..+|..|.+|.. .+..+..||||+..+...-.... +.+|++..|++||.|||+........+ ...+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~--slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~ 164 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLN--SLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVL 164 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhh--hhhHHhhccCcCcceeccceecccccchhhhhhh
Confidence 457788888888643 34567789999988764333333 689999999999999998777644333 2468
Q ss_pred EEEEEeccCCCCCCCccEEEEEeCcccCCCc
Q 042071 580 RIEIHERDDILQKDDFGGQTCLPVSELRQGI 610 (632)
Q Consensus 580 rf~V~D~d~~~~~ddflGq~~lpL~~L~~Gy 610 (632)
|+.|.|.+ ....++++||..+++..|.+-.
T Consensus 165 Rk~vcdn~-~~~~~~sqGq~r~~lkKl~p~q 194 (362)
T KOG1013|consen 165 RKVVCDND-KKTHNESQGQSRVSLKKLKPLQ 194 (362)
T ss_pred heeeccCc-ccccccCcccchhhhhccChhh
Confidence 89999998 6778999999999988887643
No 171
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=96.35 E-value=0.014 Score=55.90 Aligned_cols=85 Identities=18% Similarity=0.159 Sum_probs=58.9
Q ss_pred CCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC---ccEEEEEEEeccCCCCCCCccEEEEEeCcc-
Q 042071 530 PDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE---LALLRIEIHERDDILQKDDFGGQTCLPVSE- 605 (632)
Q Consensus 530 ~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe---la~Lrf~V~D~d~~~~~ddflGq~~lpL~~- 605 (632)
++.||++.+......-. ....|..+.-+-.+.|||-++|+|...+ .|.|.|+||+.+ ..+....+|++.++|-.
T Consensus 30 ~~l~V~~~l~~~~~~L~-~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~-~~~~~~~vg~~~~~lFd~ 107 (159)
T cd08397 30 SDLFVTCQVFDDGKPLT-LPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVS-GTGKAVPFGGTTLSLFNK 107 (159)
T ss_pred CCEEEEEEEEECCEecc-CcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEec-CCCCceEEEEEEEeeECC
Confidence 57789888763211100 0224444433345889999999987544 489999999987 33456789999999865
Q ss_pred ---cCCCceEEEcc
Q 042071 606 ---LRQGIRAVPLH 616 (632)
Q Consensus 606 ---L~~GyR~ipL~ 616 (632)
|+.|...+.|.
T Consensus 108 ~g~Lr~G~~~l~lw 121 (159)
T cd08397 108 DGTLRRGRQKLRVW 121 (159)
T ss_pred CCcEecCCEEEEEE
Confidence 78898888885
No 172
>PLN02964 phosphatidylserine decarboxylase
Probab=96.28 E-value=0.0079 Score=69.28 Aligned_cols=100 Identities=24% Similarity=0.224 Sum_probs=76.6
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRI 581 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf 581 (632)
.....|+|++|. + .-.|+|..+-..|. +.+||.+.+++.||+||+...|.|...+..+.+|
T Consensus 53 ~~~~~~~~~~~~---~----------~~~~~~~~~~~~g~------~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 113 (644)
T PLN02964 53 SGIALLTLVGAE---M----------KFKDKWLACVSFGE------QTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARI 113 (644)
T ss_pred cCeEEEEeehhh---h----------ccCCcEEEEEEecc------eeeeeccccccCCcccchhhceEeccCCcceEEE
Confidence 355788888886 1 01367766665662 3799999999999999999999998888888999
Q ss_pred EEEeccCCCCCCCccEEEEEeCcccCCC-----ceEEEccCCCCC
Q 042071 582 EIHERDDILQKDDFGGQTCLPVSELRQG-----IRAVPLHDRKGN 621 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~~L~~G-----yR~ipL~d~~g~ 621 (632)
.|||.+ ..+.++++|-+.+++..+..- ++...++|++|.
T Consensus 114 ~~~~~~-~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgd 157 (644)
T PLN02964 114 SVFETN-RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSS 157 (644)
T ss_pred EEEecC-CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCC
Confidence 999999 788899999998877665321 233457777764
No 173
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.25 E-value=0.015 Score=59.87 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=36.4
Q ss_pred CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 135 SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
=+-|.++|..|+..||..||+|++=-. ||.|||+|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~Tk--Dg~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTK--DGVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcC--CCCEEEeCCCccC
Confidence 467899999999999999999999887 7899999999873
No 174
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=96.03 E-value=0.021 Score=58.35 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 135 SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
-+-|.++|..|+..||+.||+|++=-. ||.|||.|=.||
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~--Dg~~vv~HD~~l 52 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTK--DGVLVLMHDDTL 52 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcC--CCCEEEECCCCC
Confidence 367899999999999999999999887 789999998775
No 175
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.97 E-value=0.032 Score=56.84 Aligned_cols=40 Identities=25% Similarity=0.348 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
.-+-|..++.+|+..||..||+|+|=-. ||+|||+|=.|+
T Consensus 11 ~pENTl~af~~A~~~G~d~iE~DV~~Tk--Dg~~Vv~HD~~l 50 (235)
T cd08565 11 WPENTLEGFRKALELGVDAVEFDVHLTA--DGEVVVIHDPTL 50 (235)
T ss_pred CCccHHHHHHHHHHcCCCEEEEeEEEcc--CCCEEEECCChh
Confidence 3477899999999999999999999765 689999998876
No 176
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.74 E-value=0.028 Score=57.14 Aligned_cols=97 Identities=21% Similarity=0.279 Sum_probs=68.0
Q ss_pred ccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccc------cccHHHHHHHHhhcc--c
Q 042071 122 TGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTA------PVDLTTCLETIKNYA--F 193 (632)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs------~i~f~dvi~aI~~~A--F 193 (632)
-|||-|.--. ....||..||-.||+|||=- +|+.+|.|-..+.. ++.+..+.+.++... |
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~---dg~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~ 71 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV---NGDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQA 71 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE---CCEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCC
Confidence 5999998533 35679999999999999975 47899999866543 355666777665442 3
Q ss_pred -ccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCC
Q 042071 194 -DASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILL 230 (632)
Q Consensus 194 -~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~ 230 (632)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 72 ~~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 72 YNDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 3456799999999998665434444444456666654
No 177
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=95.70 E-value=0.04 Score=55.64 Aligned_cols=79 Identities=20% Similarity=0.325 Sum_probs=56.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccc------------------------cc-cHHHHHHH
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTA------------------------PV-DLTTCLET 187 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs------------------------~i-~f~dvi~a 187 (632)
..-+-|.+++..|+..||+.||+|++=-. ||+|||+|=.||.- +| +|.||++.
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~--Dg~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~ 88 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTK--DGKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRA 88 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcC--CCCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHh
Confidence 45578999999999999999999999776 78999999877521 24 58999987
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHH
Q 042071 188 IKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTR 222 (632)
Q Consensus 188 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ 222 (632)
+++. +.|-||.-.. .....+++.+++
T Consensus 89 ~~~~--------~~l~iEiK~~-~~~~~~~~~l~~ 114 (226)
T cd08568 89 LPND--------AIINVEIKDI-DAVEPVLEIVEK 114 (226)
T ss_pred cCCC--------cEEEEEECCc-cHHHHHHHHHHH
Confidence 6542 2466666532 223345555443
No 178
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=95.70 E-value=0.038 Score=57.11 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=35.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
.-+-|..+|..|+..||..||+|+|=-. ||+|||+|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTk--Dg~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTK--DGVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECC--CCcEEEECCCCc
Confidence 4577899999999999999999999876 789999998765
No 179
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.66 E-value=0.037 Score=57.32 Aligned_cols=39 Identities=26% Similarity=0.497 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGT 174 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~T 174 (632)
.-+-|.+||..|+..|+..||+|+|=-. ||.|||+|..|
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTK--DNEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECC--CCCEEEEcCCc
Confidence 5678999999999999999999999655 68999999863
No 180
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=95.59 E-value=0.058 Score=52.30 Aligned_cols=113 Identities=23% Similarity=0.258 Sum_probs=74.2
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCC--CCCC--CCccCcEEEEEEEc---CC
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPI--KDSW--VPAWNKEFKFQLTV---PE 575 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi--~nn~--nP~WNEtf~F~v~~---pe 575 (632)
..+.|+|.++.+++.... + ...|.||++.+......-. ....|+.. .+.+ .+.|||.++|++.. |.
T Consensus 8 ~~~~i~v~~~h~~~~~~~----~--~~~~~~v~~~l~~g~~~L~-~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 8 DLLSVTVSSLHRIPPTWV----Q--SFEDFYLSCSLYHGGRLLC-SPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred ccEEEEEEEeecCChHHh----h--ccccEEEEEEEEECCEECc-CceeccccccccCccccccccceEECccchhcCCh
Confidence 458899999998875321 1 1257799998863211111 12344432 2333 57899999998764 44
Q ss_pred ccEEEEEEEeccCCCC---------CCCccEEEEEeCcc----cCCCceEEEccCC-CCCcc
Q 042071 576 LALLRIEIHERDDILQ---------KDDFGGQTCLPVSE----LRQGIRAVPLHDR-KGNEY 623 (632)
Q Consensus 576 la~Lrf~V~D~d~~~~---------~ddflGq~~lpL~~----L~~GyR~ipL~d~-~g~~~ 623 (632)
-|.|.|.||+.. ... ....||++.++|-. |++|...+.|.-. ..+++
T Consensus 81 earL~itl~~~~-~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~ 141 (171)
T cd04012 81 ESRLVLTLYGTT-SSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPL 141 (171)
T ss_pred hHEEEEEEEEEe-cCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcC
Confidence 589999999976 222 34689999999864 7889999988653 33444
No 181
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=95.56 E-value=0.078 Score=51.70 Aligned_cols=105 Identities=16% Similarity=0.169 Sum_probs=63.2
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---CCccEEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---PELALLR 580 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---pela~Lr 580 (632)
.++|+|.++. .+.. +.......||++.+.....-.. ..+|....-+-+|.|||-++|+|.. |..|.|.
T Consensus 11 ~friki~~~~-~~~~------~~~~~~~l~V~~~Ly~g~~~l~--~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc 81 (178)
T cd08399 11 KFRVKILGID-IPVL------PRNTDLTVFVEANIQHGQQVLC--QRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLN 81 (178)
T ss_pred CEEEEEEeec-ccCc------CCCCceEEEEEEEEEECCeecc--cceeeccCCCCCccccccEECccccccCChhhEEE
Confidence 3788888876 3311 1111233588887753111111 2345554445579999999999875 4458999
Q ss_pred EEEEeccCCC---------------CCCCccEEEEEeCcc----cCCCceEEEccC
Q 042071 581 IEIHERDDIL---------------QKDDFGGQTCLPVSE----LRQGIRAVPLHD 617 (632)
Q Consensus 581 f~V~D~d~~~---------------~~ddflGq~~lpL~~----L~~GyR~ipL~d 617 (632)
|+||+..+.. ..+..||++.++|-. |++|...+.|.-
T Consensus 82 ~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~W~ 137 (178)
T cd08399 82 LQIYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHMWQ 137 (178)
T ss_pred EEEEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEEec
Confidence 9999963110 013467888888754 678876666533
No 182
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=95.37 E-value=0.076 Score=45.68 Aligned_cols=63 Identities=11% Similarity=0.390 Sum_probs=49.9
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 22 AIESLFNQYSE-N---GIMTVDHLHRFLVEV--QKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 22 ei~~if~~~~~-~---~~lt~~~~~~FL~~~--Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
.|-++|.+|++ + ++|+.++|++.|+.+ .++ ..+.+++.++++.... ...+.++++.|..+|..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~-k~t~~ev~~m~~~~D~----------d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGS-KLQDAEIAKLMEDLDR----------NKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHhcC----------CCCCCCcHHHHHHHHHH
Confidence 46789999996 2 599999999999852 465 4788999999998752 12478999999998854
No 183
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.27 E-value=0.084 Score=55.00 Aligned_cols=137 Identities=17% Similarity=0.229 Sum_probs=89.1
Q ss_pred CCCCCcccccccccccccccc---CCcCC---CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHH
Q 042071 109 QDMKAPLSHYFIYTGHNSYLT---GNQLN---SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLT 182 (632)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~---g~Ql~---g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~ 182 (632)
-|-+.||++=.|--||||.-. +..+. +..--..+..=|..|.|-+.|-|=. .-.++||.. ...+|.
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~------~~~~~HG~~--~~~~~~ 94 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE------DRRVCHGCL--KTYPVD 94 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC------CeEEECCCc--CCCcHH
Confidence 456789999999999998743 12211 1222233566789999999998843 358999963 236899
Q ss_pred HHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhccccCCCCCCcCCCCCCChhhccC-cEEEecCC
Q 042071 183 TCLETIKNYAFDASEYPVVITFEDHLPPHLQGEVAALLTRIFDKEILLPDDSECLKEFPSPESLKG-KIIISTKP 256 (632)
Q Consensus 183 dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk~-KILIK~K~ 256 (632)
||++.|+++-=....=-|||++......+......+.|.+.||+.|+.+. .. .... +.++|.+ +|||-.+.
T Consensus 95 dvL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~-~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 95 VVLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DS-VFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cc-cccc-cHHHHhCCcEEEEEcC
Confidence 99999998632222234999996554333222455788999999998653 11 1122 5677764 45554544
No 184
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.06 E-value=0.11 Score=52.87 Aligned_cols=39 Identities=23% Similarity=0.189 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 135 SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
-+-|..|+..|+..|++-||+|++=-. ||.+||+|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTk--Dg~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTS--DGVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEcc--CCCEEEEECCcC
Confidence 477899999999999999999999876 789999998754
No 185
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=95.05 E-value=0.045 Score=51.25 Aligned_cols=68 Identities=26% Similarity=0.337 Sum_probs=47.5
Q ss_pred ccCCCCCC-CCCccCcEEEEEEEc---CCccEEEEEEEeccCCCCCC----CccEEEEEeCcc----cCCCceEEEccCC
Q 042071 551 QTEPIKDS-WVPAWNKEFKFQLTV---PELALLRIEIHERDDILQKD----DFGGQTCLPVSE----LRQGIRAVPLHDR 618 (632)
Q Consensus 551 kTkvi~nn-~nP~WNEtf~F~v~~---pela~Lrf~V~D~d~~~~~d----dflGq~~lpL~~----L~~GyR~ipL~d~ 618 (632)
.|+.+.-+ .++.|||.++|++.. |.-|.|.|.|+..+ ..... ..||++.+||-. |++|...++|.-.
T Consensus 23 ~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~-~~~~~~~~~~~lgw~n~~lFd~~~~L~~G~~~L~lW~~ 101 (142)
T PF00792_consen 23 STSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVD-SKKKSKKKKVPLGWVNLPLFDYRGQLRQGPQKLSLWPD 101 (142)
T ss_dssp E-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEE-CSTTT--EEEEEEEEEEESB-TTSBBEEEEEEEE-EET
T ss_pred eccccccccccceEeeEEEeecChHHCChhHeEEEEEEEec-CCCccccceeEEEEEEEEeECCCCcccCCCEEEEEEcC
Confidence 55554444 689999999999874 55589999999987 33333 589999999865 6788888877544
Q ss_pred C
Q 042071 619 K 619 (632)
Q Consensus 619 ~ 619 (632)
.
T Consensus 102 ~ 102 (142)
T PF00792_consen 102 E 102 (142)
T ss_dssp -
T ss_pred C
Confidence 4
No 186
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=94.92 E-value=0.029 Score=58.11 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=36.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.-+-|.++|..|+..||++||+|++=-. ||+|||+|-.||.
T Consensus 13 ~pENTl~af~~A~~~G~d~iE~DV~lT~--Dg~~Vv~HD~~l~ 53 (264)
T cd08575 13 FPENTIAAFRHAVKNGADMLELDVQLTK--DGQVVVFHDWDLD 53 (264)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECC--CCCEEEEcCCccc
Confidence 3577899999999999999999999887 8999999999864
No 187
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.76 E-value=0.034 Score=56.94 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=36.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.-+-|.++|.+|+..||++||+|++=-. ||+|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~Tk--Dg~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATK--DGVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECC--CCCEEEECCCccc
Confidence 4578999999999999999999999765 6899999998874
No 188
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=94.73 E-value=0.23 Score=51.95 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=88.0
Q ss_pred CCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEee---cCC---CCCCCCceEEecccccccccHHHHH
Q 042071 112 KAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDL---WPS---SKKKDGVEVCHGGTLTAPVDLTTCL 185 (632)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDc---WdG---~~~~~ePiV~HG~TlTs~i~f~dvi 185 (632)
++||++..|--|||+.-.+---.+..--.....=|..|.|-+.|=| ++. ....++-.++|| +-.-.+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 6799999999999986544211122222335567899999988865 221 001233345555 33557999999
Q ss_pred HHHhhcccccCCCceEEEecc-----CCCHHHHHHHHHHHHHHhccccCCCCCC-cCCCCCCChhhccC---cEEEecC
Q 042071 186 ETIKNYAFDASEYPVVITFED-----HLPPHLQGEVAALLTRIFDKEILLPDDS-ECLKEFPSPESLKG---KIIISTK 255 (632)
Q Consensus 186 ~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~mA~il~~ifGd~L~~~~~~-~~~~~lPSP~~Lk~---KILIK~K 255 (632)
+.|+.+.=....=-|||+|-+ ||-.+.+..+.+.+.++||+.-+.+... .....-|+.++|.+ ++||-.+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSAQEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhHHHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999986444445569999942 4433334677888999998855443211 11223578899854 4555543
No 189
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=94.63 E-value=0.052 Score=46.46 Aligned_cols=57 Identities=16% Similarity=0.212 Sum_probs=45.8
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcCCc--cEEEEEEEeccCCCCCCCccEEEEEeCcccCC
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVPEL--ALLRIEIHERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~pel--a~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
.+||.+.+...||+|.|+|.|.+....+ ..|.|.|+.. ..+.+.||++.+.++++.+
T Consensus 36 ~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~~---~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 36 HFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQTQ---TPRKRTIGECSLSLRTLST 94 (103)
T ss_pred cccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeecc---CCccceeeEEEeecccCCH
Confidence 5788888778899999999999875554 4577888873 3467899999999988754
No 190
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=94.40 E-value=0.037 Score=56.95 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=36.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.=+-|..+|..|+..||..||+|++=-. ||.|||+|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISY--DGVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEcc--CCcEEEeCCCccc
Confidence 3477899999999999999999999877 7899999998863
No 191
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=94.32 E-value=0.16 Score=50.02 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=42.3
Q ss_pred ChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHh
Q 042071 138 SAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIK 189 (632)
Q Consensus 138 S~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~ 189 (632)
+..++.+|+.. .-||+|+|.- +|++||.|=.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t---Dg~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY---GGQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee---CCeEEEECCCCCCCCCCHHHHHHhcc
Confidence 57999999998 9999999965 58999999999988888999999874
No 192
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=94.27 E-value=0.049 Score=58.98 Aligned_cols=53 Identities=17% Similarity=0.144 Sum_probs=42.2
Q ss_pred ccccccccCCc----CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 122 TGHNSYLTGNQ----LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 122 SSHNTYL~g~Q----l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+++.+.+.||. +.=+.|.++|..|+..|+.-||+|+|=-. ||.|||+|..+|.
T Consensus 23 ~~~~pliiAHRGas~~~PENTl~Af~~A~~~GaD~IE~DV~lTk--Dg~lVv~HD~~l~ 79 (355)
T PRK11143 23 DSAEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTK--DDQLVVLHDHYLD 79 (355)
T ss_pred cCCCcEEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEeeeEcc--CCcEEEeCCchhc
Confidence 33444444443 44578999999999999999999999887 7899999998764
No 193
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.04 E-value=0.053 Score=55.75 Aligned_cols=41 Identities=24% Similarity=0.178 Sum_probs=37.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.-+-|.+|+..|+..||..||+|+|=-. ||.|||+|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTk--Dg~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTK--DGVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECC--CCeEEEeCCCccc
Confidence 4578999999999999999999999877 7899999998863
No 194
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=94.00 E-value=0.064 Score=55.69 Aligned_cols=42 Identities=19% Similarity=0.077 Sum_probs=36.9
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+-|.++|..|+..||..||+|+|=-. ||.|||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTk--Dg~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSK--DGVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECC--CCCEEEeCCCchh
Confidence 45577899999999999999999999766 6899999998863
No 195
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.99 E-value=0.053 Score=54.98 Aligned_cols=41 Identities=24% Similarity=0.224 Sum_probs=36.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.=+-|..+|.+|+..||..||+|++=-. ||.|||.|-.||.
T Consensus 11 ~PENTl~Af~~A~~~gad~iE~DV~lTk--Dg~~Vv~HD~~l~ 51 (229)
T cd08581 11 YPENTLVGFRAAVDAGARFVEFDVQLSA--DGVPVVFHDDTLL 51 (229)
T ss_pred CCccHHHHHHHHHHcCCCEEEEeeeECC--CCcEEEECCCccc
Confidence 3467899999999999999999999876 7899999999874
No 196
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=93.93 E-value=0.059 Score=56.95 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=36.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.-+-|.+++..|+..||+.||+|+|=-. ||+|||+|=.||.
T Consensus 39 ~PENTl~Af~~A~~~Gad~iE~DV~lTk--DG~lVV~HD~~l~ 79 (300)
T cd08612 39 NLENTMEAFEHAVKVGTDMLELDVHLTK--DGQVVVSHDENLL 79 (300)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECc--CCeEEEECCcccc
Confidence 3477899999999999999999999776 7899999988863
No 197
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=93.90 E-value=0.06 Score=57.46 Aligned_cols=42 Identities=19% Similarity=0.132 Sum_probs=37.6
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+.|.++|..|+..||..||+||+=-. ||.|||.|-.+|-
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTK--DDKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECc--CCcEEEeCCchhh
Confidence 45678999999999999999999999876 7899999999873
No 198
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=93.86 E-value=0.063 Score=56.30 Aligned_cols=49 Identities=18% Similarity=0.169 Sum_probs=41.1
Q ss_pred cccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccc
Q 042071 127 YLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTA 177 (632)
Q Consensus 127 YL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs 177 (632)
|+.+.-+.=+-|..+|..|+..|+..||+|++=-. ||.|||+|=.||..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTk--Dg~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTK--DLVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEcc--CCeEEEEcCCeeEe
Confidence 45444456688999999999999999999999776 78999999988743
No 199
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=93.44 E-value=0.071 Score=55.74 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=35.3
Q ss_pred CCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc
Q 042071 136 KCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL 175 (632)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl 175 (632)
+-+..++..|+..||..||+|+|=-. ||.|||+|=.||
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTk--Dg~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTR--DGVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECc--CCeEEEECCCce
Confidence 57889999999999999999999876 789999999988
No 200
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=93.35 E-value=0.073 Score=56.37 Aligned_cols=41 Identities=10% Similarity=0.023 Sum_probs=36.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.=+-|.+||..|+..|+..||+|++=-. ||.+||.|-.+|.
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTk--Dg~lVv~HD~~l~ 53 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTK--DGVPICLPSINLD 53 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcC--CCcEEEeCCchhc
Confidence 3467899999999999999999999876 7899999999874
No 201
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=93.28 E-value=0.08 Score=56.39 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=37.6
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
..-+.|..+|..|+..||..||+|++=-. ||+|||.|-.||.
T Consensus 38 ~aPENTl~AF~~Ai~~GaD~IE~DV~lTk--DG~lVV~HD~tL~ 79 (315)
T cd08609 38 LAPENTLMSLRKSLECGVVVFETDVMVSK--DGVPFLMHDEGLL 79 (315)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECC--CCCEEEeCCCccc
Confidence 44678999999999999999999999887 7899999998864
No 202
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=93.23 E-value=0.076 Score=56.01 Aligned_cols=42 Identities=21% Similarity=0.154 Sum_probs=37.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.=+.|.++|..|+..||..||+|++=-. ||.|||+|-.+|-
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~lVv~HD~~l~ 53 (296)
T cd08559 12 YAPEHTLAAYALAIEMGADYIEQDLVMTK--DGVLVARHDPTLD 53 (296)
T ss_pred CCccchHHHHHHHHHhCCCEEEEeeEEcc--CCCEEEeccchhh
Confidence 34578999999999999999999999877 7899999998763
No 203
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=93.08 E-value=0.081 Score=55.39 Aligned_cols=39 Identities=13% Similarity=0.023 Sum_probs=36.2
Q ss_pred CCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 136 KCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+-+..++..|+..||..||+||+=-. ||.|||+|-.||.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTk--Dg~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTK--DLVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEcc--CCEEEEeCCCeec
Confidence 78999999999999999999999876 7899999999875
No 204
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=93.06 E-value=0.12 Score=52.55 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=37.0
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+.|.+||.+|+..|++.||+|++=-. ||.|||.|-.++.
T Consensus 10 ~~pENT~~af~~a~~~g~d~vE~Dv~lTk--Dg~~vv~HD~~l~ 51 (234)
T cd08570 10 KYPENTLLAFEKAVEAGADAIETDVHLTK--DGVVVISHDPNLK 51 (234)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEeeEcc--CCcEEEeCCCccc
Confidence 34578999999999999999999999766 7899999998864
No 205
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=92.69 E-value=0.095 Score=53.79 Aligned_cols=42 Identities=26% Similarity=0.278 Sum_probs=37.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
..-+-|.+|+..|+..|+.+||+||.=-. ||.|||+|=.||.
T Consensus 19 ~~pENT~~Af~~A~~~G~d~vE~DV~lT~--Dg~lVV~HD~~l~ 60 (249)
T PRK09454 19 LAPENTLAAIDVGARYGHRMIEFDAKLSA--DGEIFLLHDDTLE 60 (249)
T ss_pred CCChHHHHHHHHHHHcCCCEEEEEeeECC--CCCEEEECCCccc
Confidence 34567899999999999999999999877 7999999998874
No 206
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=92.60 E-value=0.11 Score=55.20 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=37.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+.|.+||..|+..||..||+|++=-. ||+|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTk--Dg~lVv~HD~~l~ 53 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTK--DGVLICRHEPELS 53 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECC--CCcEEEeCCCccc
Confidence 45678999999999999999999999876 7899999998864
No 207
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=91.96 E-value=0.57 Score=40.14 Aligned_cols=63 Identities=19% Similarity=0.362 Sum_probs=48.2
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 22 AIESLFNQYSEN----GIMTVDHLHRFLVEVQKERNPK----KEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 22 ei~~if~~~~~~----~~lt~~~~~~FL~~~Q~e~~~~----~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
.|..+|.+|+.. +.|+.++|+.+|...-++ ..+ .+++..++..+.. ...+.++++.|..++
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~----------d~dG~I~f~eF~~~~ 77 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT----------NQDGQLSFEEFLVLV 77 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC----------CCCCcCcHHHHHHHH
Confidence 467899999943 689999999999864433 244 7789999998742 124789999999987
Q ss_pred CC
Q 042071 94 LS 95 (632)
Q Consensus 94 ~s 95 (632)
.+
T Consensus 78 ~~ 79 (88)
T cd05030 78 IK 79 (88)
T ss_pred HH
Confidence 64
No 208
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=91.40 E-value=1.1 Score=38.86 Aligned_cols=65 Identities=12% Similarity=0.323 Sum_probs=48.1
Q ss_pred hHHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 21 EAIESLFNQYSE--N-G-IMTVDHLHRFLVEVQKE---RNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 21 ~ei~~if~~~~~--~-~-~lt~~~~~~FL~~~Q~e---~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
.++.++|.+|+. + + .|+.++|+..|....++ ...+.+.+.+|++.+.. ...+.+++++|..++
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~----------n~dG~Idf~EF~~l~ 79 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS----------NKDNEVDFNEFVVLV 79 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC----------CCCCCCCHHHHHHHH
Confidence 356788999993 2 4 59999999999886432 12356789999998851 124789999999987
Q ss_pred CC
Q 042071 94 LS 95 (632)
Q Consensus 94 ~s 95 (632)
.+
T Consensus 80 ~~ 81 (93)
T cd05026 80 AA 81 (93)
T ss_pred HH
Confidence 54
No 209
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=91.33 E-value=0.2 Score=52.73 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=37.5
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+.|.++|..|+..||.-||+||+=-. ||.|||+|=.+|.
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTk--DG~lVv~HD~~l~ 60 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTK--DGVPVIYHDFTIS 60 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEcc--CCeEEEEcCCcce
Confidence 45678999999999999999999999876 7899999988763
No 210
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=91.30 E-value=0.25 Score=52.27 Aligned_cols=42 Identities=17% Similarity=0.063 Sum_probs=37.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+.|.++|..|+..||..||+|++=-. ||.+||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTk--DG~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSK--DGVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcC--CCCEEEecccccc
Confidence 45688999999999999999999999877 7899999988873
No 211
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=91.04 E-value=0.86 Score=39.30 Aligned_cols=64 Identities=20% Similarity=0.302 Sum_probs=50.4
Q ss_pred hHHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 21 EAIESLFNQYSE-N--GIMTVDHLHRFLVEVQKERNPKK-EDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 21 ~ei~~if~~~~~-~--~~lt~~~~~~FL~~~Q~e~~~~~-~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
..|..+|..|+. + ++|+.++|+..|+.+=++ .++. ++++++|..... ...+.+++++|..+|.+
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~----------d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV----------NQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC----------CCCCCCcHHHHHHHHHH
Confidence 357889999987 4 899999999999975344 3565 789999988752 13578999999998866
No 212
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=90.85 E-value=1 Score=38.73 Aligned_cols=64 Identities=9% Similarity=0.248 Sum_probs=46.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHC
Q 042071 22 AIESLFNQYSEN----GIMTVDHLHRFLVEVQK---ERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLL 94 (632)
Q Consensus 22 ei~~if~~~~~~----~~lt~~~~~~FL~~~Q~---e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (632)
-|..+|.+|+.. ++|+.++|+.||..+-. ....+...+.+++..+.. ...+.+++++|..++.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~----------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL----------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC----------CCCCcCcHHHHHHHHH
Confidence 467899998832 38999999999998721 112345778889887641 1247899999998875
Q ss_pred C
Q 042071 95 S 95 (632)
Q Consensus 95 s 95 (632)
.
T Consensus 80 ~ 80 (89)
T cd05023 80 G 80 (89)
T ss_pred H
Confidence 4
No 213
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=90.74 E-value=0.3 Score=52.07 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=37.6
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+-|..+|..|+..||.-||+|++=-. ||.|||+|=.||.
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTk--DG~lVV~HD~tL~ 75 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSY--DGVPFLMHDFTLK 75 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEcc--CCCEEEeCCCccc
Confidence 44578999999999999999999999877 7899999998874
No 214
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.59 E-value=0.15 Score=54.38 Aligned_cols=108 Identities=19% Similarity=0.197 Sum_probs=73.6
Q ss_pred ceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEE
Q 042071 502 KTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRI 581 (632)
Q Consensus 502 ~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf 581 (632)
+..|.|+||.|++|-.. ....+.++|||+|.+.+...-.. +.+|+...++..|.+-+...|.=..| -..|.+
T Consensus 268 ~g~l~vEii~ar~l~~k-----~~~k~~~apyVkVYlL~~g~c~a--k~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~ 339 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVK-----PGSKSLPAPYVKVYLLENGFCIA--KKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQG 339 (405)
T ss_pred cCceeEEEEeccccccc-----CCcccccCceeEEEEcCCCceec--ccccccccccCchhhhhhhhhccCCC-ccEEEE
Confidence 45689999999998631 12223579999999986543333 78999999999888888787765444 467888
Q ss_pred EEEeccCCCCCCCccEEEEEeCcccC----CCceEEEccC
Q 042071 582 EIHERDDILQKDDFGGQTCLPVSELR----QGIRAVPLHD 617 (632)
Q Consensus 582 ~V~D~d~~~~~ddflGq~~lpL~~L~----~GyR~ipL~d 617 (632)
.||..=+......|+|.+.+-+.+|. ++.-|.+|+-
T Consensus 340 tv~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlfg 379 (405)
T KOG2060|consen 340 TVWGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLFG 379 (405)
T ss_pred EEeccccccchHHHhhHHHHHhhhhccccccceeeeeccC
Confidence 88864223344668888777776663 3344444443
No 215
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=90.54 E-value=0.61 Score=35.62 Aligned_cols=50 Identities=16% Similarity=0.329 Sum_probs=40.3
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHC
Q 042071 34 GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLL 94 (632)
Q Consensus 34 ~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (632)
+.|+.++|+.+| ..++....+.+++..|+..+.. ...+.+++++|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~----------~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDT----------DGDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTT----------SSSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhccc----------CCCCCCCHHHHHHHHH
Confidence 679999999999 5566533788899999999963 1257899999999875
No 216
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=89.48 E-value=2 Score=37.25 Aligned_cols=64 Identities=14% Similarity=0.350 Sum_probs=46.4
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 22 AIESLFNQYSEN-GIMTVDHLHRFLVEVQKE---RNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 22 ei~~if~~~~~~-~~lt~~~~~~FL~~~Q~e---~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
-|-.+|.+||++ ++|+..+|+.+|+.+=.. ...+.+.+..|++.... ...+.++|.+|..++..
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~----------n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD----------CRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC----------CCCCcCcHHHHHHHHHH
Confidence 467899999977 899999999999876221 01234567778877641 13578999999988754
No 217
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=88.83 E-value=0.36 Score=49.23 Aligned_cols=39 Identities=31% Similarity=0.431 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 135 SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
-+-|.++|..|+..|+ -||+|++=-. ||+|||+|=.||.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~--Dg~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTA--DGEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECC--CCCEEEeccchHh
Confidence 4578899999999999 8999999887 7899999988763
No 218
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=88.58 E-value=0.47 Score=48.63 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccc
Q 042071 135 SKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGT 174 (632)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~T 174 (632)
-+-|.++|..|+..|+.+||+|+.=-. ||.+||+|=+|
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTk--Dg~lVv~HD~~ 56 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTK--DGVLVVIHDET 56 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCcc--CCcEEEecccc
Confidence 377899999999999999999999887 89999999873
No 219
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=88.34 E-value=0.42 Score=50.63 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=35.5
Q ss_pred CCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 136 KCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+-+.++|..|+..|+..||+|++=-. ||.+||+|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTk--Dg~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTK--DGEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEcc--CCeEEEEecCccc
Confidence 56789999999999999999999887 7899999999873
No 220
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=88.25 E-value=0.47 Score=51.41 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=36.0
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecc-cc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGG-TL 175 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~-Tl 175 (632)
+.-+-|.++|..|+..|+.-||+|++=-. ||.|||.|=. +|
T Consensus 28 ~~PEnTl~Af~~Ai~~Gad~IE~DV~lTk--Dg~lVV~HD~~~L 69 (356)
T cd08560 28 QFPEHTRESYEAAARMGAGILECDVTFTK--DRELVCRHSQCDL 69 (356)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEeeEcc--CCcEEEECCCccc
Confidence 34577999999999999999999999877 7899999995 44
No 221
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=88.24 E-value=0.48 Score=51.26 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 133 LNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
+.-+-+..+|..|+..||..||+|++=-. ||.|||+|=.||.
T Consensus 13 ~aPENTL~AF~~A~~~GaD~IElDV~lTk--DGvlVV~HD~tL~ 54 (351)
T cd08608 13 LAPENTLMSFQKALEQKVYGLQADVTISL--DGVPFLMHDRTLR 54 (351)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEeeEcc--CCcEEEECCCccc
Confidence 34477899999999999999999999776 7899999998863
No 222
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=88.12 E-value=0.63 Score=50.20 Aligned_cols=41 Identities=24% Similarity=0.233 Sum_probs=36.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.-+.|..||.+|+..|+.|||+|+-..+ +|.+|+.|=-|..
T Consensus 81 ~penT~~A~~~a~~~Gad~ie~dV~~Ts--Dg~~v~l~d~~~~ 121 (341)
T KOG2258|consen 81 APENTLAAYKKAIADGADLIELDVQMTS--DGVPVILHDSTTV 121 (341)
T ss_pred CCcccHHHHHHHHHcCCcEEEeccccCC--CCceEEeecCcce
Confidence 3457899999999999999999999998 7999999987655
No 223
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=87.79 E-value=2.1 Score=36.78 Aligned_cols=65 Identities=12% Similarity=0.292 Sum_probs=49.0
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 21 EAIESLFNQYS-EN--G-IMTVDHLHRFLVEVQKER---NPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 21 ~ei~~if~~~~-~~--~-~lt~~~~~~FL~~~Q~e~---~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
.+|.++|..|. .+ + .|+.++|+..|+..-++. ..+.+.+++|+..+.. ...+.|+++.|..++
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~----------d~~G~I~f~eF~~l~ 78 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDE----------NGDGEVDFQEFVVLV 78 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCC----------CCCCcCcHHHHHHHH
Confidence 57889999996 33 6 499999999998643331 2467889999998852 124679999999887
Q ss_pred CC
Q 042071 94 LS 95 (632)
Q Consensus 94 ~s 95 (632)
..
T Consensus 79 ~~ 80 (92)
T cd05025 79 AA 80 (92)
T ss_pred HH
Confidence 64
No 224
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=87.71 E-value=0.61 Score=49.38 Aligned_cols=39 Identities=5% Similarity=-0.125 Sum_probs=34.2
Q ss_pred CChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccccc
Q 042071 137 CSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTA 177 (632)
Q Consensus 137 SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs 177 (632)
++...++.|...|++.||+|++=-. ||.|||||-+++..
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTk--DgvpVV~HD~~i~~ 54 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLK--DGTPVVAPEWFVPV 54 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECc--CCEEEEECCCceEe
Confidence 4678899999999999999999776 78999999998743
No 225
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=87.69 E-value=1.1 Score=44.01 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=30.7
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEecc
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHERD 587 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~d 587 (632)
.++|-+...+-+|.|+|++.+.+... +-+-|+|+++...
T Consensus 54 e~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S 94 (189)
T cd08695 54 EYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCS 94 (189)
T ss_pred eEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEee
Confidence 57888887788999999999988754 3467999887644
No 226
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=87.22 E-value=6.5 Score=42.80 Aligned_cols=108 Identities=19% Similarity=0.310 Sum_probs=69.8
Q ss_pred HHHHHhCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHhhccccc--CCCceEEEecc---CCCHHHHHHH
Q 042071 142 IKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDA--SEYPVVITFED---HLPPHLQGEV 216 (632)
Q Consensus 142 Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~--S~yPvILSlE~---Hcs~~qQ~~m 216 (632)
...=|..|.|-+.|=|=-.++++++-.++||.- .++|.||++.|+++.=.. ..=-|||.+-. +=....|.++
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 345578899999888844331234566777652 478999999999953221 22457777753 2234555567
Q ss_pred HHHHHHHhccccCCCCCCcCCCCCCChhhcc-----CcEEEecCCC
Q 042071 217 AALLTRIFDKEILLPDDSECLKEFPSPESLK-----GKIIISTKPP 257 (632)
Q Consensus 217 A~il~~ifGd~L~~~~~~~~~~~lPSP~~Lk-----~KILIK~K~~ 257 (632)
.+.|+. |||+|. |+ .... . -+.++|- .+|||-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~-~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PV-DVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CC-cccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 777777 999987 43 2222 2 3788887 6788887554
No 227
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=87.00 E-value=0.5 Score=51.00 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=76.0
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc-CCc------
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV-PEL------ 576 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~-pel------ 576 (632)
.|.+.|.+|++++...... -.|.||+++..-. .|.. .+.+|.+++++-+|.|+|.|...+.. +.+
T Consensus 368 elel~ivrg~~~pvp~gp~------hld~fvr~efpl~-nD~~-qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR 439 (523)
T KOG3837|consen 368 ELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLE-NDSR-QKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQR 439 (523)
T ss_pred HhHHHHhhcccCCCCCCch------hHHhhhccccccc-cccc-ccCccceeeCCCCCCcccceeeeccCCCcccHHHHH
Confidence 4677788888776432111 1366999887543 3443 37899999999999999999988753 211
Q ss_pred ----cEEEEEEEeccCCCCCCCccEEEEEeCcccCCC---ceEEEccCCC
Q 042071 577 ----ALLRIEIHERDDILQKDDFGGQTCLPVSELRQG---IRAVPLHDRK 619 (632)
Q Consensus 577 ----a~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G---yR~ipL~d~~ 619 (632)
--+.|+|+...+....|.++|.+.+.|.-|..- ...++|+|-.
T Consensus 440 ~fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~DGR 489 (523)
T KOG3837|consen 440 RFKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKDGR 489 (523)
T ss_pred HHHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccccc
Confidence 148899999875555688999999988777543 3467888754
No 228
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=86.18 E-value=3.6 Score=35.54 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=47.2
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 21 EAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 21 ~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
.++..+|..+-.+ +.|+.++|+.+|+.. + .+.+++.+|+..+.. ...+.|++++|..+|..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~-~---~~~~ev~~i~~~~d~----------~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS-G---LPQTLLAKIWNLADI----------DNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc-C---CCHHHHHHHHHHhcC----------CCCCCcCHHHHHHHHHH
Confidence 5677888888533 899999999999872 2 567788899988752 12477999999988865
No 229
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=86.15 E-value=3.9 Score=30.50 Aligned_cols=59 Identities=19% Similarity=0.457 Sum_probs=45.2
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 23 IESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 23 i~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
+..+|..|..+ +.|+.++|...|+... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~----------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD----------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC----------CCCeEeHHHHHHHh
Confidence 67789988644 7899999999998753 3 35677888899988521 23579999999876
No 230
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=86.02 E-value=4.3 Score=40.19 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=49.2
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEeccCCCCC---CCccEEEEEeCc-----ccCCCceEEEccCC
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHERDDILQK---DDFGGQTCLPVS-----ELRQGIRAVPLHDR 618 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~d~~~~~---ddflGq~~lpL~-----~L~~GyR~ipL~d~ 618 (632)
.++|-+...+-+|.|+|++.+.|... .-+-|+|.++.......+ ...+|-+.+||- .|+.|-..++|+--
T Consensus 54 e~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vYK~ 133 (196)
T cd08694 54 EYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVYKV 133 (196)
T ss_pred eEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEEEe
Confidence 57788766677999999999988644 347899999764310111 235788888884 27788877777754
Q ss_pred C
Q 042071 619 K 619 (632)
Q Consensus 619 ~ 619 (632)
+
T Consensus 134 d 134 (196)
T cd08694 134 D 134 (196)
T ss_pred c
Confidence 4
No 231
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=85.29 E-value=0.54 Score=55.74 Aligned_cols=84 Identities=18% Similarity=0.297 Sum_probs=59.9
Q ss_pred CCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEE-EEc--------CCccEEEEEEEeccCCCCCCCcc
Q 042071 526 ACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQ-LTV--------PELALLRIEIHERDDILQKDDFG 596 (632)
Q Consensus 526 ~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~-v~~--------pela~Lrf~V~D~d~~~~~ddfl 596 (632)
..+..|||+.|...|. .+.|-++.+++||.||++..|. +.. ...-.+.|+|+|.| ..+.++|.
T Consensus 223 k~~~sdp~a~v~f~~q-------s~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~d-r~g~~ef~ 294 (1105)
T KOG1326|consen 223 KDDESDPDAAVEFCGQ-------SKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLD-RSGINEFK 294 (1105)
T ss_pred cccCCCchhhhhcccc-------cceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhh-hhchHHhh
Confidence 3355799999998874 5789999999999999999885 321 11246889999999 77889999
Q ss_pred EEEEEeCc-ccC-CCceEEEccC
Q 042071 597 GQTCLPVS-ELR-QGIRAVPLHD 617 (632)
Q Consensus 597 Gq~~lpL~-~L~-~GyR~ipL~d 617 (632)
|....... -+. +-..++|++.
T Consensus 295 gr~~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 295 GRKKQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred cccccceEEEecCCccceEEeec
Confidence 97644322 223 3345666654
No 232
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=85.03 E-value=4.7 Score=39.35 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=36.9
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEeccCCCC-CC--CccEEEEEeCcc----cCCCceEEEcc
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHERDDILQ-KD--DFGGQTCLPVSE----LRQGIRAVPLH 616 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~d~~~~-~d--dflGq~~lpL~~----L~~GyR~ipL~ 616 (632)
.+.|.+...+-+|.|+|+|.+++..+ +-+-|.|++++.. ... ++ ..+|-+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s-~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVS-CKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE----SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeec-cccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 56777777778999999999988754 3468999999865 211 11 467777777765 33455666665
No 233
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=84.93 E-value=3.4 Score=36.23 Aligned_cols=57 Identities=21% Similarity=0.193 Sum_probs=36.3
Q ss_pred CCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEc---CCccEEEEEEEecc
Q 042071 530 PDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTV---PELALLRIEIHERD 587 (632)
Q Consensus 530 ~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~---pela~Lrf~V~D~d 587 (632)
.+.||++.+......-. ....|+.+.-...+.|||-++|++.. |..|.|.|+||+..
T Consensus 32 ~~l~v~~~l~~g~~~l~-~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~i~~~~ 91 (100)
T smart00142 32 SDLYVEIQLYHGGKLLC-LPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCITIYEVK 91 (100)
T ss_pred ceEEEEEEEEECCEEcc-CcEEecccCCCCCcccceeEEccCchhcCChhhEEEEEEEEee
Confidence 46799998763211110 12244443323458999999998764 44589999999865
No 234
>PTZ00183 centrin; Provisional
Probab=84.91 E-value=4.4 Score=37.59 Aligned_cols=65 Identities=25% Similarity=0.477 Sum_probs=50.0
Q ss_pred ChhHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 19 PPEAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 19 ~r~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
+..++..+|..|-.+ +.|+.++|..+|...+ . ..+.+++..++..+.. ...+.|+++.|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~----------~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADR----------NGDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC----------CCCCcCcHHHHHHHHhc
Confidence 456888999988633 7899999999998654 3 4778889999988852 12466999999998866
No 235
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=84.39 E-value=1 Score=35.70 Aligned_cols=61 Identities=16% Similarity=0.476 Sum_probs=42.9
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--CCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 23 IESLFNQYSEN--GIMTVDHLHRFLVEVQKERN--PKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 23 i~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~--~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
|.++|..|=.+ +.|+.++|..+++....... ...+.+..++..+.. ...+.|++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~----------d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDT----------DGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTT----------TSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCC----------CCcCCCcHHHHhccC
Confidence 67899999533 89999999999998765421 112345555666642 135789999999875
No 236
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=84.22 E-value=1.4 Score=49.64 Aligned_cols=95 Identities=24% Similarity=0.231 Sum_probs=62.8
Q ss_pred cCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcE-EEEE-EEcCC-ccEEEEEEEeccCCCCCCCccEEEE
Q 042071 524 FDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKE-FKFQ-LTVPE-LALLRIEIHERDDILQKDDFGGQTC 600 (632)
Q Consensus 524 ~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEt-f~F~-v~~pe-la~Lrf~V~D~d~~~~~ddflGq~~ 600 (632)
.+.++..|||.++.=... .+.....++|.++++++||.|-.. .... +...+ -..+.+.+||++ ..++++++|++.
T Consensus 151 kd~f~ksd~~l~~~~~~~-d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~-~~~~~~~ig~~~ 228 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVD-DGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYD-SNGKHDLIGKFQ 228 (529)
T ss_pred ccccccCCcceEEEEecC-CCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccC-CCCCcCceeEec
Confidence 456788999987764321 122223689999999999999763 2221 21112 256889999999 667779999999
Q ss_pred EeCcccCCCc--eEEEccCCCC
Q 042071 601 LPVSELRQGI--RAVPLHDRKG 620 (632)
Q Consensus 601 lpL~~L~~Gy--R~ipL~d~~g 620 (632)
.++..++... -.+++.++++
T Consensus 229 tt~~~~~~~~~~~~~~~~~~~~ 250 (529)
T KOG1327|consen 229 TTLSELQEPGSPNQIMLINPKK 250 (529)
T ss_pred ccHHHhcccCCcccccccChhh
Confidence 9999987422 2344444444
No 237
>PTZ00184 calmodulin; Provisional
Probab=83.75 E-value=4.9 Score=36.65 Aligned_cols=65 Identities=22% Similarity=0.454 Sum_probs=47.3
Q ss_pred ChhHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 19 PPEAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 19 ~r~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
....+..+|..|-.+ +.|+.++|..+|..... ..+.+.+..++..+.. ...+.+++++|..+|.+
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~----------~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADV----------DGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCC----------CCCCcCcHHHHHHHHhc
Confidence 446678888888532 78999999999987532 3567778888877642 12467999999998876
No 238
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=83.70 E-value=5.7 Score=34.04 Aligned_cols=65 Identities=17% Similarity=0.341 Sum_probs=47.9
Q ss_pred hHHHHHHHHhh-C-C-C-CcCHHHHHHHHHHH---cCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 21 EAIESLFNQYS-E-N-G-IMTVDHLHRFLVEV---QKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 21 ~ei~~if~~~~-~-~-~-~lt~~~~~~FL~~~---Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
.+|.++|..|. . + + .|+.++|+..|+.+ ......+.+++.++|+.... ...+.++++.|..++
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~----------n~dG~v~f~eF~~li 77 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS----------DGDGECDFQEFMAFV 77 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCC----------CCCCcCcHHHHHHHH
Confidence 36889999997 2 3 6 59999999999971 11123567889999998742 124789999999887
Q ss_pred CC
Q 042071 94 LS 95 (632)
Q Consensus 94 ~s 95 (632)
..
T Consensus 78 ~~ 79 (88)
T cd05027 78 AM 79 (88)
T ss_pred HH
Confidence 54
No 239
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=83.08 E-value=2.4 Score=41.28 Aligned_cols=68 Identities=18% Similarity=0.216 Sum_probs=47.5
Q ss_pred cccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEeccCCC-----CCCCccEEEEEeCcc-----cCCCceEEEccC
Q 042071 550 DQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHERDDIL-----QKDDFGGQTCLPVSE-----LRQGIRAVPLHD 617 (632)
Q Consensus 550 ~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~d~~~-----~~ddflGq~~lpL~~-----L~~GyR~ipL~d 617 (632)
++|-+..+ -+|.|+|+|.+.+... +..-|.|++++-+ .. .....+|-+.+||-. |+.|...+|++-
T Consensus 55 ~~sv~~~~-k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~-~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k 132 (178)
T cd08679 55 YTSVVYYH-KNPVFNDEIKIQLPADLTPQHHLLFTFYHVS-SKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYK 132 (178)
T ss_pred EEEEEEcC-CCCCCceeEEEecCCccCCCeEEEEEEEccc-cccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEe
Confidence 34444444 7899999999988543 3467999998865 22 124567888888877 677888888776
Q ss_pred CC
Q 042071 618 RK 619 (632)
Q Consensus 618 ~~ 619 (632)
..
T Consensus 133 ~~ 134 (178)
T cd08679 133 YD 134 (178)
T ss_pred cC
Confidence 55
No 240
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=81.92 E-value=1.4 Score=46.59 Aligned_cols=41 Identities=12% Similarity=-0.155 Sum_probs=36.0
Q ss_pred CCCCChHHHHHHHhCCCc--EEEEeecCCCCCCCCceEEeccccc
Q 042071 134 NSKCSAGPIKDALKRGLR--GIELDLWPSSKKKDGVEVCHGGTLT 176 (632)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCR--cvElDcWdG~~~~~ePiV~HG~TlT 176 (632)
.=+.+.+||..|+..|+. -||+|++=-. ||.|||.|..+|.
T Consensus 13 ~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTk--DgvlVv~HD~~L~ 55 (299)
T cd08603 13 FPDSSLFAYQFAASSSSPDVALWCDLQLTK--DGVGICLPDLNLD 55 (299)
T ss_pred CCcchHHHHHHHHHcCCCCCEEEEEeeECc--CCcEEEeCCcccc
Confidence 347899999999999996 6999999877 7899999998874
No 241
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=80.43 E-value=0.38 Score=32.17 Aligned_cols=14 Identities=21% Similarity=0.456 Sum_probs=13.0
Q ss_pred cCCCceEEEeccCC
Q 042071 195 ASEYPVVITFEDHL 208 (632)
Q Consensus 195 ~S~yPvILSlE~Hc 208 (632)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
No 242
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=80.27 E-value=3.7 Score=35.50 Aligned_cols=62 Identities=19% Similarity=0.297 Sum_probs=39.8
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCC---------CCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHH
Q 042071 23 IESLFNQYSEN-GIMTVDHLHRFLVEVQKERN---------PKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKY 92 (632)
Q Consensus 23 i~~if~~~~~~-~~lt~~~~~~FL~~~Q~e~~---------~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~ 92 (632)
.+++|..+++. +.|+...|..||++..+-.. ..+..++..|+.-. .+..++.+.|+.+
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~------------~~~~I~~~~Fl~w 72 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ------------LSPKITENQFLDW 72 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT------------T-S-B-HHHHHHH
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC------------CCCccCHHHHHHH
Confidence 57899999975 89999999999999864321 12334555555421 1467999999999
Q ss_pred HCCC
Q 042071 93 LLSE 96 (632)
Q Consensus 93 L~s~ 96 (632)
|+++
T Consensus 73 l~~e 76 (90)
T PF09069_consen 73 LMSE 76 (90)
T ss_dssp HHT-
T ss_pred HHhC
Confidence 9996
No 243
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=79.51 E-value=9.8 Score=29.72 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=42.7
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHC
Q 042071 24 ESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLL 94 (632)
Q Consensus 24 ~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (632)
..+|..+-.+ +.++.++|+.+|+.. + .+.+.+..++..+... ..+.++++.|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~----------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD----------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC----------CCCcCCHHHHHHHHH
Confidence 3578887533 899999999999864 3 3677889999887521 246799999988763
No 244
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=79.50 E-value=2.4 Score=31.60 Aligned_cols=27 Identities=19% Similarity=0.440 Sum_probs=23.1
Q ss_pred HHHHHHHHhh---CC-CCcCHHHHHHHHHHH
Q 042071 22 AIESLFNQYS---EN-GIMTVDHLHRFLVEV 48 (632)
Q Consensus 22 ei~~if~~~~---~~-~~lt~~~~~~FL~~~ 48 (632)
-|-.+|.+|| ++ .+|+..+|+..|..+
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4678999999 44 789999999999875
No 245
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=79.27 E-value=8.8 Score=32.99 Aligned_cols=65 Identities=15% Similarity=0.366 Sum_probs=48.7
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 21 EAIESLFNQYSE---N-GIMTVDHLHRFLVEVQKE---RNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 21 ~ei~~if~~~~~---~-~~lt~~~~~~FL~~~Q~e---~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
.++...|..|.. + +.|+.++|+..|+..-++ ...+.+++..+++.+.. ...+.++++.|..++
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~----------~~dg~I~f~eF~~l~ 77 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQ----------NRDGKVNFEEFVSLV 77 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCC----------CCCCcCcHHHHHHHH
Confidence 568889999964 3 789999999999863321 13567889999998752 124689999999887
Q ss_pred CC
Q 042071 94 LS 95 (632)
Q Consensus 94 ~s 95 (632)
.+
T Consensus 78 ~~ 79 (94)
T cd05031 78 AG 79 (94)
T ss_pred HH
Confidence 54
No 246
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=78.07 E-value=11 Score=31.67 Aligned_cols=66 Identities=17% Similarity=0.309 Sum_probs=48.5
Q ss_pred hhHHHHHHHHhhC--C--CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHH
Q 042071 20 PEAIESLFNQYSE--N--GIMTVDHLHRFLVEVQKER---NPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKY 92 (632)
Q Consensus 20 r~ei~~if~~~~~--~--~~lt~~~~~~FL~~~Q~e~---~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~ 92 (632)
..++..+|..|.. + +.|+.++|..+|+..=+.. ..+.+.+..|+..+.. ...+.|++++|..+
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~----------~~~g~I~f~eF~~~ 76 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDV----------NKDGKVDFQEFLVL 76 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhcc----------CCCCcCcHHHHHHH
Confidence 3577888999976 4 7899999999997521211 2357788899988852 12467999999998
Q ss_pred HCC
Q 042071 93 LLS 95 (632)
Q Consensus 93 L~s 95 (632)
|..
T Consensus 77 ~~~ 79 (88)
T cd00213 77 IGK 79 (88)
T ss_pred HHH
Confidence 764
No 247
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=77.55 E-value=2.8 Score=47.28 Aligned_cols=71 Identities=27% Similarity=0.365 Sum_probs=54.3
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcCCccEEEEEEEeccCC---CCCCCccEEEEEeCcccC-CCceEEEccCCC
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIEIHERDDI---LQKDDFGGQTCLPVSELR-QGIRAVPLHDRK 619 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~---~~~ddflGq~~lpL~~L~-~GyR~ipL~d~~ 619 (632)
..+|.++.+..||.|-++|.....+.....|+|.|+|-++. ....+|+|++..-++.+- ..-+.++|.-+.
T Consensus 42 ~~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~ 116 (529)
T KOG1327|consen 42 VGRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKP 116 (529)
T ss_pred ccceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhccc
Confidence 45899999999999999999988888888999999997732 234789999888877764 344455554443
No 248
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=75.08 E-value=12 Score=39.50 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=54.6
Q ss_pred HHHhCCCcEEEEeec---CCCCCCCCceEEecccccccccHHHHHHHHhhcccccCCCceEEEeccCC----CHHHHHHH
Q 042071 144 DALKRGLRGIELDLW---PSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYPVVITFEDHL----PPHLQGEV 216 (632)
Q Consensus 144 ~aL~~GCRcvElDcW---dG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc----s~~qQ~~m 216 (632)
.=|..|.|-.-|=+= +++ |.+--|+||-+.| ++.-+|+.-|+++- ..++==||| ||..- ...-=..+
T Consensus 74 ~QL~~GvRylDlRi~~~~~~~--D~~~~i~HGl~~~--~~v~~vL~ev~~Fl-~~h~eEVVi-L~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 74 EQLVAGVRYLDLRIGYKLMDP--DREFYICHGLFST--YPVLEVLNEVRQFL-SEHPEEVVI-LEFRHFFGMTEPHHRKL 147 (306)
T ss_pred HHHhhcceEEEEEeeeccCCC--CcceEEEeecccc--ccHHHHHHHHHHHH-HhCCCEEEE-EeccchhccCccHHHHH
Confidence 346789998777665 223 4456899996544 55578888888842 223333444 66332 45666778
Q ss_pred HHHHHHHhccccCCC
Q 042071 217 AALLTRIFDKEILLP 231 (632)
Q Consensus 217 A~il~~ifGd~L~~~ 231 (632)
...+++.||++|+.+
T Consensus 148 ~~~ik~~~g~~l~~d 162 (306)
T KOG4306|consen 148 VLVIKQGFGDILCDD 162 (306)
T ss_pred HHHHHHHhcccccCh
Confidence 888999999999943
No 249
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=70.83 E-value=9.3 Score=36.37 Aligned_cols=63 Identities=14% Similarity=0.323 Sum_probs=46.5
Q ss_pred HHHHHHHhh----CC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 23 IESLFNQYS----EN-GIMTVDHLHRFLVEVQKER-NPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 23 i~~if~~~~----~~-~~lt~~~~~~FL~~~Q~e~-~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
|+.+|..|+ .+ ..|+-..|.+++++.+=-. .++..++.-||.++... ..+.|++++|...|--
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k----------~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK----------GARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S----------S-SEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC----------CCcccCHHHHHHHHHH
Confidence 568899995 33 7899999999999986432 47788999999998621 1244999999988853
No 250
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=66.43 E-value=14 Score=39.06 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=59.1
Q ss_pred CCccccccccccccccc---cCCc----C---CCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccccc-----
Q 042071 112 KAPLSHYFIYTGHNSYL---TGNQ----L---NSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTLT----- 176 (632)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~g~Q----l---~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~TlT----- 176 (632)
+.||++-.|=-|||+.- .+.= + .+..--.....=|..|+|-+.|-+--.. +++=.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~--~~~~~~~H~~~~~~~~~G 83 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITH--GGELWTGHYNGEDASAQG 83 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcC--CCcEEEEecccccccccC
Confidence 57999999999999852 2210 0 1122222345668899999988875432 3567888886422
Q ss_pred -ccccHHHHHHHHhhcccccCCCceEEEec
Q 042071 177 -APVDLTTCLETIKNYAFDASEYPVVITFE 205 (632)
Q Consensus 177 -s~i~f~dvi~aI~~~AF~~S~yPvILSlE 205 (632)
+..+|.|||+.|+++.=....=-|||.+-
T Consensus 84 ~~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 84 ANGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred cCCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999999632221222666665
No 251
>PTZ00183 centrin; Provisional
Probab=64.65 E-value=29 Score=31.99 Aligned_cols=63 Identities=21% Similarity=0.441 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 21 EAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 21 ~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
.++..+|..+-.+ +.|+.++|..+|+... . ..+...+..++..+.. ...+.+++.+|...+..
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~----------~~~g~i~~~eF~~~~~~ 81 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDK----------DGSGKIDFEEFLDIMTK 81 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC----------CCCCcEeHHHHHHHHHH
Confidence 4566778777533 8899999999998663 2 2456778888888752 12467999999988754
No 252
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=62.67 E-value=9.1 Score=25.71 Aligned_cols=26 Identities=8% Similarity=0.489 Sum_probs=22.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 042071 22 AIESLFNQYSEN--GIMTVDHLHRFLVE 47 (632)
Q Consensus 22 ei~~if~~~~~~--~~lt~~~~~~FL~~ 47 (632)
|+..+|+.|=.+ +.++.++|...|+.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 688999999533 89999999999874
No 253
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=62.42 E-value=8.3 Score=25.91 Aligned_cols=26 Identities=15% Similarity=0.500 Sum_probs=21.4
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 042071 22 AIESLFNQYSEN--GIMTVDHLHRFLVE 47 (632)
Q Consensus 22 ei~~if~~~~~~--~~lt~~~~~~FL~~ 47 (632)
++..+|..|-.+ +.|+.++|+.+|+.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999643 89999999999983
No 254
>PTZ00184 calmodulin; Provisional
Probab=60.44 E-value=43 Score=30.22 Aligned_cols=63 Identities=17% Similarity=0.439 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 21 EAIESLFNQYSE-N-GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 21 ~ei~~if~~~~~-~-~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
+++...|..+-. + +.+|.++|..+|... +. ..+.+.+..++..+.. ...+.++++.|..+|..
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d~----------~~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQ-NPTEAELQDMINEVDA----------DGNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCc----------CCCCcCcHHHHHHHHHH
Confidence 466778877743 2 899999999999764 33 2456778888888752 12467999999998875
No 255
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=59.46 E-value=37 Score=31.75 Aligned_cols=64 Identities=22% Similarity=0.476 Sum_probs=50.0
Q ss_pred hhHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 20 PEAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 20 r~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
..+|.+.|+-|-.+ +++|+++|+++|...= + ..+.+.+..+|..... ...+.+++++|...+..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg-~-~~~~~e~~~mi~~~d~----------d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLG-E-KLTDEECKEMIREVDV----------DGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC-C-cCCHHHHHHHHHhcCC----------CCCCeEeHHHHHHHHhc
Confidence 35999999999633 8999999999999864 4 3678889999888652 12466889999988764
No 256
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=58.48 E-value=52 Score=39.44 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=57.9
Q ss_pred EEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCc-cccCCCCCCCCCccCcEEEEEEEc---CCccEE
Q 042071 504 TLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMT-DQTEPIKDSWVPAWNKEFKFQLTV---PELALL 579 (632)
Q Consensus 504 ~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k-~kTkvi~nn~nP~WNEtf~F~v~~---pela~L 579 (632)
.++|+++++...-.+ ...|-+|.|...-..++..-++ ..|.-+...-+|.||+.+.|+|.. |..|.|
T Consensus 344 ~frI~l~~is~~n~~---------~t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~ArL 414 (1076)
T KOG0904|consen 344 PFRIKLVGISKVNLP---------ETVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMARL 414 (1076)
T ss_pred ceEEEEeeccccCCC---------cccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhhh
Confidence 477888877654321 1123444444321112222122 444444434689999999999874 555778
Q ss_pred EEEEEeccC---------------CCCCCCccEEEEEeCcc----cCCCceEEEccC
Q 042071 580 RIEIHERDD---------------ILQKDDFGGQTCLPVSE----LRQGIRAVPLHD 617 (632)
Q Consensus 580 rf~V~D~d~---------------~~~~ddflGq~~lpL~~----L~~GyR~ipL~d 617 (632)
.|.|+.--. .....-.+|++.+-|-. |+.|-+.+.+.-
T Consensus 415 c~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~Lh~W~ 471 (1076)
T KOG0904|consen 415 CLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVLHMWP 471 (1076)
T ss_pred eeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEEEecC
Confidence 887765310 11123357888777654 678865554433
No 257
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=57.65 E-value=55 Score=35.39 Aligned_cols=100 Identities=13% Similarity=0.228 Sum_probs=70.1
Q ss_pred EEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCc-------c
Q 042071 505 LKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPEL-------A 577 (632)
Q Consensus 505 L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pel-------a 577 (632)
+-|.|+.|.+.+... .-...|+..+.|. ...|-.+..+-.|.||..+-|.+..-.+ .
T Consensus 2 ivl~i~egr~F~~~~---------~~~~vv~a~~ng~-------~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~t 65 (340)
T PF12416_consen 2 IVLSILEGRNFPQRP---------RHPIVVEAKFNGE-------SLETDPVPHTESPQFNTELAWECDRKALKQHRLQRT 65 (340)
T ss_pred EEEEEecccCCCCCC---------CccEEEEEEeCCc-------eeeecCCCCCCCceeecceeeeccHHHHHHhhccCC
Confidence 457788898887310 1123566666653 5667777777889999999998753222 3
Q ss_pred EEEEEEEeccCCCCCCCccEEEEEeCccc---CCC-----ceEEEccCCCC
Q 042071 578 LLRIEIHERDDILQKDDFGGQTCLPVSEL---RQG-----IRAVPLHDRKG 620 (632)
Q Consensus 578 ~Lrf~V~D~d~~~~~ddflGq~~lpL~~L---~~G-----yR~ipL~d~~g 620 (632)
-|++..+..|...+..+.+|...++|.+. ..| .+|.+|+.-.+
T Consensus 66 PiKl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~~~ 116 (340)
T PF12416_consen 66 PIKLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSSSS 116 (340)
T ss_pred ceEEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEcccccc
Confidence 47777777663345678899999999999 555 78999999855
No 258
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=57.15 E-value=32 Score=33.90 Aligned_cols=67 Identities=16% Similarity=0.180 Sum_probs=43.3
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEeccCCCC---------CCCccEEEEEeCcc----cCCCceEE
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHERDDILQ---------KDDFGGQTCLPVSE----LRQGIRAV 613 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~d~~~~---------~ddflGq~~lpL~~----L~~GyR~i 613 (632)
...|.+...+-+|.|+|++.+.+... +..-|+|+.+.-+ ... ....+|-+.+||-. |..|...+
T Consensus 57 ~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvs-c~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~L 135 (185)
T cd08697 57 SAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVS-CDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTP 135 (185)
T ss_pred EEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeec-cccccccccCCCccceEEEEEEeeecCCCEEecCCEee
Confidence 56777777778999999998887643 3467999998854 110 12345666666654 44455555
Q ss_pred Ecc
Q 042071 614 PLH 616 (632)
Q Consensus 614 pL~ 616 (632)
|+.
T Consensus 136 pV~ 138 (185)
T cd08697 136 PVA 138 (185)
T ss_pred eEE
Confidence 544
No 259
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=56.69 E-value=92 Score=29.82 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=69.9
Q ss_pred cceEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCC-----
Q 042071 501 VKTTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPE----- 575 (632)
Q Consensus 501 ~~~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pe----- 575 (632)
....|.++|+.|+-.-... .+.-+..+..+.+.++-. .++++|+.|.-..+|.|+|.|-|++....
T Consensus 7 ~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f~-----~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~ 77 (156)
T PF15627_consen 7 GRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHFR-----GQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGS 77 (156)
T ss_pred CceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEec-----CceEecCCcccccCCCCCCcEEEEeccccccccc
Confidence 3566999999997543100 000022333444554421 12799999999999999999999987432
Q ss_pred --c------cEEEEEEEeccCCCCCCCccEEEEEeCccc-CCCce----EEEccCCCCC
Q 042071 576 --L------ALLRIEIHERDDILQKDDFGGQTCLPVSEL-RQGIR----AVPLHDRKGN 621 (632)
Q Consensus 576 --l------a~Lrf~V~D~d~~~~~ddflGq~~lpL~~L-~~GyR----~ipL~d~~g~ 621 (632)
. .-|++.|.-.| ..+...++|...+.-..+ ..|+. .|.|....++
T Consensus 78 ~~~~lls~~~pihivli~~d-~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e 135 (156)
T PF15627_consen 78 TATTLLSISDPIHIVLIRTD-PSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPE 135 (156)
T ss_pred chhHhhcCCCceEEEEEEec-CCCceEeeeeceehHHHHhccCCCccceeEEEeccCCC
Confidence 1 23667776666 444457888888876653 45663 4677766665
No 260
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=56.21 E-value=12 Score=44.59 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=71.2
Q ss_pred CCceeEEEEecCCCCCCCCccccCCCCCC-CCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCC
Q 042071 530 PDFYAKVGIAGVPGDTSSMTDQTEPIKDS-WVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQ 608 (632)
Q Consensus 530 ~DpyV~V~i~g~p~d~~~~k~kTkvi~nn-~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~ 608 (632)
.++|+++.+... .-.+|..+.+. -+|.|.+.|..-+...+ +.+.|+|.+.+ ..+...++|.+.+|+-.+..
T Consensus 138 ~e~Ylt~~l~~~------~~~~t~~~~~f~e~s~~~f~~~~~~~h~~-g~v~~~~~~~~-~~G~s~~w~~v~~s~~~~~~ 209 (887)
T KOG1329|consen 138 LENYLTVVLHKA------RYRRTHVIYEFLENSRWSFSFDIGFAHKA-GYVIFRVKGAR-VPGWSKRWGRVKISFLQYCS 209 (887)
T ss_pred ccchheeeechh------hhhchhhhhcccccchhhhhccccccccc-cEEEEeecCCc-cccceeEEEEeccchhhhhc
Confidence 467999998652 14678877777 49999999877666654 68999999887 55546788999999888877
Q ss_pred Cc---eEEEccCCCCCccCCcccccc
Q 042071 609 GI---RAVPLHDRKGNEYKKREASHV 631 (632)
Q Consensus 609 Gy---R~ipL~d~~g~~~~~~~~~~~ 631 (632)
|- .++++++.++.+..+.+.+++
T Consensus 210 ~~~~~~~~~Il~~d~~~~~~~~~~~~ 235 (887)
T KOG1329|consen 210 GHRIGGWFPILDNDGKPHQKGSNESL 235 (887)
T ss_pred cccccceeeeeccCCccccCCcccce
Confidence 63 467888888887777666654
No 261
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=49.88 E-value=22 Score=21.62 Aligned_cols=26 Identities=12% Similarity=0.443 Sum_probs=20.9
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 042071 22 AIESLFNQYSEN--GIMTVDHLHRFLVE 47 (632)
Q Consensus 22 ei~~if~~~~~~--~~lt~~~~~~FL~~ 47 (632)
|+..+|..+-.+ +.++.++|..+++.
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467889888644 78999999999874
No 262
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=49.49 E-value=33 Score=33.57 Aligned_cols=55 Identities=20% Similarity=0.169 Sum_probs=37.5
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcC--CccEEEEEEEeccCCCCC------CCccEEEEEeCc
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVP--ELALLRIEIHERDDILQK------DDFGGQTCLPVS 604 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~p--ela~Lrf~V~D~d~~~~~------ddflGq~~lpL~ 604 (632)
...|.+...|-+|.|+|++..++..+ +..-|+|+.+.-+ ...+ ...+|-+.+||-
T Consensus 55 ~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs-~~~k~~~~~~e~~~Gys~lPL~ 117 (179)
T cd08696 55 EAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHIS-CQKKQEGGSVETPIGYTWLPLL 117 (179)
T ss_pred eEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEee-ccccccCCCccceEEEEEEeee
Confidence 56777777778999999999887643 3467999998854 2111 134666666653
No 263
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=49.44 E-value=18 Score=41.65 Aligned_cols=54 Identities=28% Similarity=0.440 Sum_probs=43.8
Q ss_pred ccCcEEEEEEEcCCc---cEEEEEEEeccCCCCCCCccEEEEEeCcc----cCCCceEEEcc
Q 042071 562 AWNKEFKFQLTVPEL---ALLRIEIHERDDILQKDDFGGQTCLPVSE----LRQGIRAVPLH 616 (632)
Q Consensus 562 ~WNEtf~F~v~~pel---a~Lrf~V~D~d~~~~~ddflGq~~lpL~~----L~~GyR~ipL~ 616 (632)
.|||=+++.+..+++ |.+.+++||.. ......|+|..++.+.. |++|...++|.
T Consensus 78 ~wnewLtlpvky~dLt~~a~l~itiW~~n-~~~~~~~vg~~t~~lf~k~~~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 78 NWNEWLTLPVKYSDLTRNAQLAITIWDVN-GPKKAVFVGGTTVSLFGKYGMLKQGMQDLKLW 138 (843)
T ss_pred chhhhhccccccccccccceEEEEEEecC-CCceeeeccceEEEeecccchHhhhhhhcccc
Confidence 399999999988776 68999999987 55667899988887654 67898877775
No 264
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=47.77 E-value=66 Score=30.91 Aligned_cols=66 Identities=20% Similarity=0.457 Sum_probs=51.5
Q ss_pred CChhHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 18 EPPEAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 18 ~~r~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
.++.||..-|+-|=-+ ++++..+|++-|... ++ ..+.+++..|++.+.. ...+.++++.|...+..
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l-ge-~~~deev~~ll~~~d~----------d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSL-GE-RLSDEEVEKLLKEYDE----------DGDGEIDYEEFKKLIKD 156 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh-cc-cCCHHHHHHHHHhcCC----------CCCceEeHHHHHHHHhc
Confidence 4568999999999633 899999999999853 34 4778899999998862 12477999999987765
No 265
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=47.21 E-value=37 Score=32.95 Aligned_cols=100 Identities=16% Similarity=0.307 Sum_probs=65.1
Q ss_pred hhHHHHHHHHhhCC-C--CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC-
Q 042071 20 PEAIESLFNQYSEN-G--IMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS- 95 (632)
Q Consensus 20 r~ei~~if~~~~~~-~--~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s- 95 (632)
|.++-.+|.++.+. + .++.+.|.+-+.+.=+....+.+.|..+|...-.+ .....+|+.+|..||.-
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~---------k~~~~iT~~Df~~F~A~F 88 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTP---------KNTNVITIPDFYKFLARF 88 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS-----------SS-SEEEHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcC---------CCCceeeHHHHHHHHHHh
Confidence 46778899999865 3 78999988887776323335678899999887521 12467999999998743
Q ss_pred -CCCC-----------------CCCCCCCccCCCCCccccccccccccccc
Q 042071 96 -EKNS-----------------PLCPSRGVHQDMKAPLSHYFIYTGHNSYL 128 (632)
Q Consensus 96 -~~n~-----------------~~~~~~~v~qDM~~PLs~YfI~SSHNTYL 128 (632)
.++. .+--.....+.|+++|+-||=+.=||=..
T Consensus 89 GP~~tim~KI~~lL~~s~~~~~wl~~~Pd~~~~~~~~i~g~f~~t~~NC~i 139 (181)
T PF11422_consen 89 GPEETIMEKIHSLLCSSNNDGQWLYFDPDAEKNFDNSISGYFDNTEPNCFI 139 (181)
T ss_dssp SSGGGHHHHHHHHHHHHHTTTS-B-SSSSTTTTTCCS-EEEEESSSTTEEE
T ss_pred CCchhHHHHHHHHHHhhccCCcceeeCchhhcccCcccceeeccCCCceEE
Confidence 3222 22001225567888999999888887543
No 266
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=47.16 E-value=79 Score=29.50 Aligned_cols=66 Identities=18% Similarity=0.407 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCCCCC
Q 042071 21 EAIESLFNQYSE-N-GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLSEKN 98 (632)
Q Consensus 21 ~ei~~if~~~~~-~-~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s~~n 98 (632)
.++.++|..+-. + +.++..+|...|+.--.. .+.++...+++.+.. ...+.++++.|...|.....
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~----------dg~g~I~~~eF~~l~~~~~~ 75 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDL----------DGDGTIDFEEFLDLMEKLGE 75 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCC----------CCCCeEcHHHHHHHHHhhhc
Confidence 578889999853 3 899999999999987654 678899999999862 12478999999999987433
No 267
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=46.26 E-value=35 Score=35.47 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=38.8
Q ss_pred cccCCcCCCCCChHHHHHHHhCCCcEEEEee--cCCCCCCCCc-eEEecccccc--ccc----HHHHHHHHhhc
Q 042071 127 YLTGNQLNSKCSAGPIKDALKRGLRGIELDL--WPSSKKKDGV-EVCHGGTLTA--PVD----LTTCLETIKNY 191 (632)
Q Consensus 127 YL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDc--WdG~~~~~eP-iV~HG~TlTs--~i~----f~dvi~aI~~~ 191 (632)
|.+||-+ -++++.-.+|..|+-.||+|+ |+. +.| -.|||-.-++ .++ |.+.++.+++-
T Consensus 1 ~~iaHmV---n~~~~v~~~l~~GANaiE~Dv~f~~~----~~~~~~~Hg~pcdc~r~c~~~~~f~~~l~~~r~~ 67 (265)
T cd08576 1 YAIAHMV---NDLEGVDDALDHGANAIEIDVTFWSN----GTGWWADHDVPCDCFRGCTAREMFDEILDYRRNG 67 (265)
T ss_pred Ccchhhh---ccHHHHHHHHHcCCCceeEEEEEccC----CcEEEeeCCCccccccCCcHHHHHHHHHHHHHhc
Confidence 3344544 357888999999999999999 443 344 7888876555 344 55555555554
No 268
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=45.85 E-value=45 Score=25.78 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=33.0
Q ss_pred cCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 36 MTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 36 lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
|+..+.++||+...=+ ++.+.|..||++..- + +.+.|..++|..|.
T Consensus 2 msf~Evk~lLk~~NI~--~~~~yA~~LFq~~D~-----s-----~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIE--MDDEYARQLFQECDK-----S-----QSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-S-----S-----SSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHccC--cCHHHHHHHHHHhcc-----c-----CCCCccHHHHHHHH
Confidence 7889999999987643 678899999998751 1 24678888888875
No 269
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=45.33 E-value=90 Score=30.03 Aligned_cols=61 Identities=11% Similarity=0.406 Sum_probs=45.1
Q ss_pred HHHHHHHHhhC--CCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 22 AIESLFNQYSE--NGIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 22 ei~~if~~~~~--~~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
++++.|..+.. ++.|+..+|.+.|+.-+.. .+.+.+..|++.+-. ....|++..|+..|--
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d~-----------~~~~idf~~Fl~~ms~ 83 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEIDA-----------GNETVDFPEFLTVMSV 83 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhccC-----------CCCccCHHHHHHHHHH
Confidence 34445555543 3899999999999976653 678889999988741 2467999999988743
No 270
>PF14186 Aida_C2: Cytoskeletal adhesion; PDB: 2QZQ_A 2QZ5_A.
Probab=44.64 E-value=39 Score=31.99 Aligned_cols=105 Identities=18% Similarity=0.122 Sum_probs=52.5
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCC-CC-CccCcEEEEEEE---cCCcc
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDS-WV-PAWNKEFKFQLT---VPELA 577 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn-~n-P~WNEtf~F~v~---~pela 577 (632)
..|+|.|-... +. |.....|||+.|++....+......+.|.+.... .| =.||.+...+.. .|.-+
T Consensus 13 t~l~v~Iekig-lk--------da~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~Ga 83 (147)
T PF14186_consen 13 TYLSVFIEKIG-LK--------DASQYIDPYFTVSVKDGNGKDVEPPQDTPVGSRREDNYVHFNNTVHLQTPLEKLPKGA 83 (147)
T ss_dssp -EEEEEEEEEE--T--------TGGG-EEEEEEEEEE-TTS-BSS--EE--S-SEEETTEEEEEEEEE-SS-GGGS-TT-
T ss_pred ceEEEEEEEEE-EC--------ChHHccCCeEEEEEECCCCCCccccccCCCcccccCCEEEEcccEEEcCCHHHCCCce
Confidence 34677766543 21 1123368999999975433322224556654221 22 345655555443 34557
Q ss_pred EEEEEEEeccCCCCCCCccEEEEEeCcccCCCceEEEcc
Q 042071 578 LLRIEIHERDDILQKDDFGGQTCLPVSELRQGIRAVPLH 616 (632)
Q Consensus 578 ~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR~ipL~ 616 (632)
.|.|+++++.....+-...|++.++++.|.+|=-.+.|+
T Consensus 84 ai~fE~kH~K~kk~k~S~kcw~fme~dei~~g~~~lely 122 (147)
T PF14186_consen 84 AIFFEFKHYKPKKKKTSTKCWAFMELDEIKPGPVVLELY 122 (147)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEEEEGGG--SEEEEE--E
T ss_pred EEEEEEEeeeccceeeeeeEEEEEEhhhccCCceeeehh
Confidence 789999987622222345799999999999995555554
No 271
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=40.54 E-value=73 Score=33.48 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=51.8
Q ss_pred CCcCCCCCChHHHHHHHhC----C-CcEEEEeecCCCCCCCCceEEec-ccc-cccccHHHHHHHHhhcccccCCCceEE
Q 042071 130 GNQLNSKCSAGPIKDALKR----G-LRGIELDLWPSSKKKDGVEVCHG-GTL-TAPVDLTTCLETIKNYAFDASEYPVVI 202 (632)
Q Consensus 130 g~Ql~g~SS~e~Y~~aL~~----G-CRcvElDcWdG~~~~~ePiV~HG-~Tl-Ts~i~f~dvi~aI~~~AF~~S~yPvIL 202 (632)
+=|+.| ++++.|.++..+ | +..|||-|.- | ..-|| ..+ -..=...+++++|++.. ++||++
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c-P------~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~v 162 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC-P------NVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIV 162 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC-C------CCCCCccccccCHHHHHHHHHHHHHhc----CCCEEE
Confidence 345655 568999877754 8 9999999853 2 12253 222 22335689999999864 799998
Q ss_pred EeccCCCHHHHHHHHHHHHH
Q 042071 203 TFEDHLPPHLQGEVAALLTR 222 (632)
Q Consensus 203 SlE~Hcs~~qQ~~mA~il~~ 222 (632)
-|-. +.+.-..+|+.+.+
T Consensus 163 Kl~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 163 KLTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred EcCC--CchhHHHHHHHHHH
Confidence 7752 33455567776665
No 272
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=38.37 E-value=1.2e+02 Score=32.16 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=45.1
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCCCCCCCccCcEEEEEEEcCCccEEEEE
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIKDSWVPAWNKEFKFQLTVPELALLRIE 582 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~nn~nP~WNEtf~F~v~~pela~Lrf~ 582 (632)
..|-+.++.|++|..... ...-..+.|+.++..-. . +-||.+.....-=.|.|+|+.++...+ .+.+.
T Consensus 51 GiL~~H~~~GRGLr~~p~----~kglt~~~ycVle~drq----h--~aRt~vrs~~~~f~w~e~F~~Dvv~~~--vl~~l 118 (442)
T KOG1452|consen 51 GILYFHAYNGRGLRMTPQ----QKGLTVCFYCVLEPDRQ----H--PARTRVRSSGPGFAWAEDFKHDVVNIE--VLHYL 118 (442)
T ss_pred ceEEEEEecccccccChh----ccCceeeeeeeeeeccc----C--ccccccccCCCCccchhhceeecccce--eeeEE
Confidence 457788899999875321 11223567877775421 1 344444333333369999999887543 57788
Q ss_pred EEecc
Q 042071 583 IHERD 587 (632)
Q Consensus 583 V~D~d 587 (632)
||.++
T Consensus 119 vySW~ 123 (442)
T KOG1452|consen 119 VYSWP 123 (442)
T ss_pred EeecC
Confidence 88887
No 273
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=38.09 E-value=1.9e+02 Score=26.33 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=59.7
Q ss_pred eEEEEEEEecccccccCCCcccCCCCCCCceeEEEEecCCCCCCCCccccCCCC-CCCCCccCcEEEEEEEc---C----
Q 042071 503 TTLKVTLYSGEGWDKEFHHTYFDACSPPDFYAKVGIAGVPGDTSSMTDQTEPIK-DSWVPAWNKEFKFQLTV---P---- 574 (632)
Q Consensus 503 ~~L~V~Iisa~~L~~~~~~~~~d~~s~~DpyV~V~i~g~p~d~~~~k~kTkvi~-nn~nP~WNEtf~F~v~~---p---- 574 (632)
..+.|.|....++|. .+..|.|.+........ ...|.... .+..-.|||+|.+.+.. .
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~--~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~ 72 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKG--SGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKE 72 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCcc--ceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCc
Confidence 457778877777662 12245555543211100 13343332 23567899999998653 1
Q ss_pred -CccEEEEEEEeccCCCCCCCccEEEEEeCcccCCC-----ceEEEccCC
Q 042071 575 -ELALLRIEIHERDDILQKDDFGGQTCLPVSELRQG-----IRAVPLHDR 618 (632)
Q Consensus 575 -ela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~G-----yR~ipL~d~ 618 (632)
+-..+.|.|+... ..++...+|.+.|.|.....- -+.++|...
T Consensus 73 ~~~K~~~~~v~~~~-~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~ 121 (143)
T PF10358_consen 73 FQPKELKFSVFEVD-GSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC 121 (143)
T ss_pred EeeEEEEEEEEEec-CCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC
Confidence 1136889998874 223335899999999987542 356777776
No 274
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=36.19 E-value=1.7e+02 Score=26.41 Aligned_cols=61 Identities=18% Similarity=0.346 Sum_probs=43.2
Q ss_pred ChhHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 19 PPEAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 19 ~r~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
-+.+|...|..+=.+ +.|+.++|..++ . . .....+..+|+.+.. ...+.||+++|...|.-
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~----------n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDL----------DKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCC----------CCCCCCCHHHHHHHHhC
Confidence 345788899998533 899999999987 2 1 223445667777741 13578999999999843
No 275
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins. PKN is a lipid-activated serine/threonine kinase. It is a member of the protein kinase C (PKC) superfamily, but lacks a C1 domain. There are at least 3 different isoforms of PKN (PRK1/PKNalpha/PAK1; PKNbeta, and PRK2/PAK2/PKNgamma). The C-terminal region contains the Ser/Thr type protein kinase domain, while the N-terminal region of PKN contains three antiparallel coiled-coil (ACC) finger domains which are relatively rich in charged residues and contain a leucine zipper-like sequence. These domains binds to the small GTPase RhoA. Following these domains is a C2-like domain. Its C-terminal part functions as an auto-inhibitory region. PKNs are not activated by classical PKC activators such as diacylglycerol, phorbol ester or Ca2+, but instead are activated by phospholipids and unsaturated fatty acids. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 struct
Probab=35.66 E-value=66 Score=28.10 Aligned_cols=47 Identities=21% Similarity=0.360 Sum_probs=34.6
Q ss_pred CCCccCcEEEEEEEcCCccEEEEEEEeccCCCCCCCccEEEEEeCcccCCCce
Q 042071 559 WVPAWNKEFKFQLTVPELALLRIEIHERDDILQKDDFGGQTCLPVSELRQGIR 611 (632)
Q Consensus 559 ~nP~WNEtf~F~v~~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~~GyR 611 (632)
.+..|++.|+|++.-. .-|.+.|+-.| . ..+.|-..+.|...+-|++
T Consensus 31 s~q~WDQ~Fti~LdRs--RELEI~VywrD-~---RslCav~~lrLEd~~~~~~ 77 (98)
T cd08687 31 SNQAWDQSFTLELERS--RELEIAVYWRD-W---RSLCAVKFLKLEDERHEVQ 77 (98)
T ss_pred ccccccceeEEEeecc--cEEEEEEEEec-c---hhhhhheeeEhhhhcccce
Confidence 3678999999988642 35889999887 2 5677878888887655553
No 276
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=35.26 E-value=76 Score=30.54 Aligned_cols=68 Identities=22% Similarity=0.321 Sum_probs=47.8
Q ss_pred CceeEEEEecCCCCCCCCccccCCC--CCCCCCccCcEEEEEEE-cCCccEEEEEEEeccCCCCCCCccEEEEEeCcccC
Q 042071 531 DFYAKVGIAGVPGDTSSMTDQTEPI--KDSWVPAWNKEFKFQLT-VPELALLRIEIHERDDILQKDDFGGQTCLPVSELR 607 (632)
Q Consensus 531 DpyV~V~i~g~p~d~~~~k~kTkvi--~nn~nP~WNEtf~F~v~-~pela~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~ 607 (632)
..|++|.+.+. . ..+|+.. ..+|.=.+||.|.+++. .|+ .|.+.||... . ..+..|+++.+||-...
T Consensus 38 ~~~ikl~~N~k----~--V~~T~~~~l~~dF~v~f~~~f~v~i~~~Pe--si~l~i~E~~-~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFNDK----E--VSRTRSRPLWSDFRVHFNEIFNVQITRWPE--SIKLEIYEKS-G-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECCE----E--EEeeeeEecCCCeEEeccCEEEEEEecCCC--EEEEEEEEcc-C-ccceEEEEEEeeCCCCc
Confidence 45888888652 1 2455443 33466678999999986 454 6899999877 3 56889999999976654
Q ss_pred C
Q 042071 608 Q 608 (632)
Q Consensus 608 ~ 608 (632)
.
T Consensus 108 ~ 108 (168)
T PF15625_consen 108 V 108 (168)
T ss_pred c
Confidence 3
No 277
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=33.15 E-value=25 Score=28.85 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=26.7
Q ss_pred CChhHHHHHHHHhhCC-CCcCHHHHHHHHHHHc
Q 042071 18 EPPEAIESLFNQYSEN-GIMTVDHLHRFLVEVQ 49 (632)
Q Consensus 18 ~~r~ei~~if~~~~~~-~~lt~~~~~~FL~~~Q 49 (632)
.+..+|.+-|+.++++ .++|.++|++-|.-+|
T Consensus 3 ~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 3 DSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp STCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 3568899999999988 8999999999887655
No 278
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=32.31 E-value=47 Score=21.34 Aligned_cols=23 Identities=17% Similarity=0.650 Sum_probs=18.1
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHH
Q 042071 23 IESLFNQYSEN--GIMTVDHLHRFL 45 (632)
Q Consensus 23 i~~if~~~~~~--~~lt~~~~~~FL 45 (632)
|..+|+.+=.+ +.++.++|++|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 46788888433 899999999985
No 279
>PTZ00466 actin-like protein; Provisional
Probab=30.86 E-value=55 Score=35.81 Aligned_cols=47 Identities=19% Similarity=0.234 Sum_probs=39.2
Q ss_pred HHHHHHHHhhcccc-----cCCCceEEEeccCCCHHHHHHHHHHHHHHhccc
Q 042071 181 LTTCLETIKNYAFD-----ASEYPVVITFEDHLPPHLQGEVAALLTRIFDKE 227 (632)
Q Consensus 181 f~dvi~aI~~~AF~-----~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~ 227 (632)
=.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-.
T Consensus 85 dwd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p 136 (380)
T PTZ00466 85 NWNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVP 136 (380)
T ss_pred CHHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCCC
Confidence 35788888888873 368999999778888899999999999999864
No 280
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=30.76 E-value=35 Score=26.74 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=22.2
Q ss_pred ccccccccCCcCCCCCChHHHHHHHhCCCcEEEE
Q 042071 122 TGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIEL 155 (632)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvEl 155 (632)
+.++|+|.. +....+-|..|...|+.+|-.
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~~ 61 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVSP 61 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEEH
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEECC
Confidence 459999976 666778999999999988853
No 281
>PTZ00452 actin; Provisional
Probab=29.12 E-value=60 Score=35.44 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHhhcccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhcc-ccC
Q 042071 182 TTCLETIKNYAFD------ASEYPVVITFEDHLPPHLQGEVAALLTRIFDK-EIL 229 (632)
Q Consensus 182 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd-~L~ 229 (632)
.|.++.|=+|+|. .+++||+++=-..++..++++||++|=|.|+- .++
T Consensus 79 wd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~ 133 (375)
T PTZ00452 79 WDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLY 133 (375)
T ss_pred HHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEE
Confidence 5778888888874 25899999955777889999999999999987 344
No 282
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=27.81 E-value=21 Score=25.13 Aligned_cols=16 Identities=25% Similarity=0.324 Sum_probs=6.6
Q ss_pred HHHHHhCCCcEEEEeecCC
Q 042071 142 IKDALKRGLRGIELDLWPS 160 (632)
Q Consensus 142 Y~~aL~~GCRcvElDcWdG 160 (632)
||.+|-+|+||- ++.|
T Consensus 1 yitclfrgarcr---vysg 16 (42)
T PF11478_consen 1 YITCLFRGARCR---VYSG 16 (42)
T ss_dssp ----B-TT-EEE---TT-S
T ss_pred CeEEEeccceEE---EecC
Confidence 788889999985 5555
No 283
>PLN02964 phosphatidylserine decarboxylase
Probab=27.78 E-value=1.7e+02 Score=34.53 Aligned_cols=61 Identities=5% Similarity=0.123 Sum_probs=48.5
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 23 IESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 23 i~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
+.++|..+-.+ +.|+.++|..+|... ++ ..+.++++++|+.|.. ...+.|+.++|...|..
T Consensus 181 i~~mf~~~D~DgdG~IdfdEFl~lL~~l-g~-~~seEEL~eaFk~fDk----------DgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 181 ARRILAIVDYDEDGQLSFSEFSDLIKAF-GN-LVAANKKEELFKAADL----------NGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHh-cc-CCCHHHHHHHHHHhCC----------CCCCcCCHHHHHHHHHh
Confidence 78999988533 889999999999864 44 3567889999998852 12478999999999987
No 284
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=27.50 E-value=57 Score=30.82 Aligned_cols=67 Identities=24% Similarity=0.397 Sum_probs=46.4
Q ss_pred CCCCCChHHHHHHHhCCCc--EEEEeecCCCC------------CCCCceEEeccccc-ccccHHHHHHHHhhcccccCC
Q 042071 133 LNSKCSAGPIKDALKRGLR--GIELDLWPSSK------------KKDGVEVCHGGTLT-APVDLTTCLETIKNYAFDASE 197 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCR--cvElDcWdG~~------------~~~ePiV~HG~TlT-s~i~f~dvi~aI~~~AF~~S~ 197 (632)
+.|.-+.+.+.+.|+.-|. -++++|.-... .+-..||.--+.+| ++|..+|++.++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 6788999999888877555 56788854320 11234555544555 789999999988 5
Q ss_pred CceEEEeccCCCH
Q 042071 198 YPVVITFEDHLPP 210 (632)
Q Consensus 198 yPvILSlE~Hcs~ 210 (632)
.|+ +|+|.|-
T Consensus 94 ~P~---VEVHiSN 103 (146)
T PRK05395 94 IPV---IEVHLSN 103 (146)
T ss_pred CCE---EEEecCC
Confidence 675 4999874
No 285
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=27.42 E-value=2.2e+02 Score=29.55 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=57.4
Q ss_pred cCCcCCCCCChHHHHHHH----hCCCcEEEEeecCCCCCCCCceEEeccc-ccccccHHHHHHHHhhcccccCCCceEEE
Q 042071 129 TGNQLNSKCSAGPIKDAL----KRGLRGIELDLWPSSKKKDGVEVCHGGT-LTAPVDLTTCLETIKNYAFDASEYPVVIT 203 (632)
Q Consensus 129 ~g~Ql~g~SS~e~Y~~aL----~~GCRcvElDcWdG~~~~~ePiV~HG~T-lTs~i~f~dvi~aI~~~AF~~S~yPvILS 203 (632)
++=||.|. +.+.|.++. ..|+..|||+|---. +-.|.. +...=..++++++|++.. +.||++=
T Consensus 101 vi~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~cP~-------~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 168 (289)
T cd02810 101 LIASVGGS-SKEDYVELARKIERAGAKALELNLSCPN-------VGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVK 168 (289)
T ss_pred EEEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCCCC-------CCCCcccccCHHHHHHHHHHHHHcc----CCCEEEE
Confidence 44566663 555654433 459999999985321 112222 223345678999999854 7999998
Q ss_pred eccCCCHHHHHHHHHHHHHHhccccCC
Q 042071 204 FEDHLPPHLQGEVAALLTRIFDKEILL 230 (632)
Q Consensus 204 lE~Hcs~~qQ~~mA~il~~ifGd~L~~ 230 (632)
|-..-+.+.=..+|+.+.+.=-|.|.+
T Consensus 169 l~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 169 LSPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 887767667777788776643355543
No 286
>PTZ00281 actin; Provisional
Probab=27.41 E-value=63 Score=35.20 Aligned_cols=47 Identities=19% Similarity=0.220 Sum_probs=39.2
Q ss_pred HHHHHHHHhhcccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhccc
Q 042071 181 LTTCLETIKNYAFD------ASEYPVVITFEDHLPPHLQGEVAALLTRIFDKE 227 (632)
Q Consensus 181 f~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~ 227 (632)
=.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||--
T Consensus 79 dwd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp 131 (376)
T PTZ00281 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131 (376)
T ss_pred CHHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCc
Confidence 35778888888884 368999999767788999999999999999875
No 287
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=26.90 E-value=86 Score=31.68 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=32.6
Q ss_pred CcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHhhccc
Q 042071 150 LRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAF 193 (632)
Q Consensus 150 CRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF 193 (632)
+=+|-||+.+| -.++++||.-.+.+...+.++...+..+
T Consensus 123 ~ivvslD~~~g-----~~v~~~gw~~~~~~~~~~~~~~~~~~g~ 161 (229)
T PF00977_consen 123 RIVVSLDARDG-----YKVATNGWQESSGIDLEEFAKRLEELGA 161 (229)
T ss_dssp GEEEEEEEEET-----EEEEETTTTEEEEEEHHHHHHHHHHTT-
T ss_pred cEEEEEEeeec-----eEEEecCccccCCcCHHHHHHHHHhcCC
Confidence 44566999986 2499999999999999999999999875
No 288
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=26.04 E-value=2e+02 Score=28.35 Aligned_cols=69 Identities=20% Similarity=0.373 Sum_probs=45.5
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCC-CHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCC
Q 042071 21 EAIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNP-KKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLS 95 (632)
Q Consensus 21 ~ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~-~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s 95 (632)
.=+...|+-|--+ +.++.++|...|..-=++... ..+....|+++--.... ....+.|++++|.+++.+
T Consensus 104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D------~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 104 EKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEAD------TDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhC------CCCCCcCcHHHHHHHHHc
Confidence 3577899999633 889999999999887664321 24444444444321100 123578999999999877
No 289
>KOG2421 consensus Predicted starch-binding protein [General function prediction only]
Probab=26.00 E-value=16 Score=40.57 Aligned_cols=61 Identities=18% Similarity=0.136 Sum_probs=45.5
Q ss_pred CCCCCccccccc--cccccccccCCcCCCCCCh-----------HHHHHHHhCCCcEEEEeecCCCCCCCCceEEeccc
Q 042071 109 QDMKAPLSHYFI--YTGHNSYLTGNQLNSKCSA-----------GPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGT 174 (632)
Q Consensus 109 qDM~~PLs~YfI--~SSHNTYL~g~Ql~g~SS~-----------e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~T 174 (632)
.||+.++.+||= .-|=|||. ...|.|-. ..+-.|++.|.--||.|+---+ +..|||||+.-
T Consensus 309 ~~l~~~~~~~w~~~~~~l~~g~---rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~--D~~~vvyh~f~ 382 (417)
T KOG2421|consen 309 VDLRPSLINYWKKNGLSLNTGH---RGNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTK--DLVPVVYHDFV 382 (417)
T ss_pred eecChHHhhhhcccchhhhccC---CcCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhccccc--CCceeeeccce
Confidence 799999999997 44555554 44454432 2345788899999999998877 78899999963
No 290
>PRK08136 glycosyl transferase family protein; Provisional
Probab=25.15 E-value=67 Score=34.39 Aligned_cols=26 Identities=15% Similarity=0.127 Sum_probs=21.6
Q ss_pred CCCceEEecc-cccccccHHHHHHHHh
Q 042071 164 KDGVEVCHGG-TLTAPVDLTTCLETIK 189 (632)
Q Consensus 164 ~~ePiV~HG~-TlTs~i~f~dvi~aI~ 189 (632)
.|-||+-||. ..+|++.-.||+++..
T Consensus 108 ~G~~V~kHGnr~vssk~gsadvleaLG 134 (317)
T PRK08136 108 EGVPVLVHGVSEDPTRVTSAEIFEALG 134 (317)
T ss_pred CCCeEEEECCCCCCCcccHHHHHHHcC
Confidence 3679999995 5788888899999874
No 291
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=24.88 E-value=75 Score=34.42 Aligned_cols=46 Identities=28% Similarity=0.388 Sum_probs=36.0
Q ss_pred HHHHHHHhhcccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhccc
Q 042071 182 TTCLETIKNYAFD------ASEYPVVITFEDHLPPHLQGEVAALLTRIFDKE 227 (632)
Q Consensus 182 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~ 227 (632)
.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-|.||-.
T Consensus 73 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~~ 124 (393)
T PF00022_consen 73 WDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGVP 124 (393)
T ss_dssp HHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--S
T ss_pred ccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhcccccc
Confidence 4677777777775 578999999999999999999999999999864
No 292
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=24.69 E-value=65 Score=30.24 Aligned_cols=67 Identities=19% Similarity=0.378 Sum_probs=47.5
Q ss_pred CCCCCChHHHHHHHhCCCc--EEEEeecCCC------------CCCCCceEEeccccc-ccccHHHHHHHHhhcccccCC
Q 042071 133 LNSKCSAGPIKDALKRGLR--GIELDLWPSS------------KKKDGVEVCHGGTLT-APVDLTTCLETIKNYAFDASE 197 (632)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCR--cvElDcWdG~------------~~~~ePiV~HG~TlT-s~i~f~dvi~aI~~~AF~~S~ 197 (632)
+.|.-+.+.+.+.|+.-|+ -+|++|.--. ..+-+.||.--+.+| ++|..+|++.++.
T Consensus 20 iYG~~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~~-------- 91 (140)
T cd00466 20 IYGTTTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAVS-------- 91 (140)
T ss_pred cCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcCC--------
Confidence 6788899998888877666 6788886432 012245666655666 7899999999883
Q ss_pred CceEEEeccCCCH
Q 042071 198 YPVVITFEDHLPP 210 (632)
Q Consensus 198 yPvILSlE~Hcs~ 210 (632)
.|+ +|+|.|-
T Consensus 92 ~P~---VEVHiSN 101 (140)
T cd00466 92 IPV---IEVHISN 101 (140)
T ss_pred CCE---EEEecCC
Confidence 566 4999874
No 293
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=24.06 E-value=81 Score=34.02 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=37.5
Q ss_pred HHHHHHHhhcccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhccc
Q 042071 182 TTCLETIKNYAFD------ASEYPVVITFEDHLPPHLQGEVAALLTRIFDKE 227 (632)
Q Consensus 182 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~ 227 (632)
.|+++.|=+|.|. .+.+||+|+.=...+..+++.|+++|-|.||-.
T Consensus 74 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~ 125 (373)
T smart00268 74 WDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNFP 125 (373)
T ss_pred HHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCCC
Confidence 5777888777775 257999998666677899999999999999854
No 294
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=22.95 E-value=3.2e+02 Score=26.96 Aligned_cols=61 Identities=21% Similarity=0.354 Sum_probs=40.9
Q ss_pred hhHHHHHHHHhh----C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 20 PEAIESLFNQYS----E-N-GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 20 r~ei~~if~~~~----~-~-~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
+.||..|+..|. . + +.||.++|..-..-.| .. -+..||+.|.... ....+++.+|.+.|
T Consensus 29 ~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~-Np-----~~~rI~~~f~~~~---------~~~~v~F~~Fv~~l 93 (187)
T KOG0034|consen 29 ANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELAL-NP-----LADRIIDRFDTDG---------NGDPVDFEEFVRLL 93 (187)
T ss_pred HHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhc-Cc-----HHHHHHHHHhccC---------CCCccCHHHHHHHH
Confidence 578777666653 3 3 7899999999884333 21 3568888886311 11229999999998
Q ss_pred CC
Q 042071 94 LS 95 (632)
Q Consensus 94 ~s 95 (632)
.-
T Consensus 94 s~ 95 (187)
T KOG0034|consen 94 SV 95 (187)
T ss_pred hh
Confidence 53
No 295
>PTZ00004 actin-2; Provisional
Probab=22.69 E-value=1e+02 Score=33.63 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=36.8
Q ss_pred HHHHHHHhhcccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhccc
Q 042071 182 TTCLETIKNYAFD------ASEYPVVITFEDHLPPHLQGEVAALLTRIFDKE 227 (632)
Q Consensus 182 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ifGd~ 227 (632)
.|+++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 4677777777763 368999998666777888889999999999876
No 296
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=22.59 E-value=3.5e+02 Score=26.01 Aligned_cols=61 Identities=16% Similarity=0.316 Sum_probs=44.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHC
Q 042071 22 AIESLFNQYSEN--GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLL 94 (632)
Q Consensus 22 ei~~if~~~~~~--~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (632)
.|..-|.-+-.+ +.+..+.|+..|.. |++ ..+.+++.+++..+-+ ...+.+....|+..|.
T Consensus 102 ~I~~AF~~FD~~~~G~I~~d~lre~Ltt-~gD-r~~~eEV~~m~r~~p~----------d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 102 VILNAFKTFDDEGSGKIDEDYLRELLTT-MGD-RFTDEEVDEMYREAPI----------DKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHhcCccCCCccCHHHHHHHHHH-hcc-cCCHHHHHHHHHhCCc----------ccCCceeHHHHHHHHH
Confidence 344444444322 89999999999997 988 5889999999888642 1236688888887775
No 297
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=22.49 E-value=2.1e+02 Score=29.61 Aligned_cols=85 Identities=20% Similarity=0.250 Sum_probs=63.3
Q ss_pred ccccccccCCcCCCCCCh-HHHHHHH-hCCCcEEEEeecCCCCCCCCceEEecccccccccHHHHHHHHhhcccccCCCc
Q 042071 122 TGHNSYLTGNQLNSKCSA-GPIKDAL-KRGLRGIELDLWPSSKKKDGVEVCHGGTLTAPVDLTTCLETIKNYAFDASEYP 199 (632)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~-e~Y~~aL-~~GCRcvElDcWdG~~~~~ePiV~HG~TlTs~i~f~dvi~aI~~~AF~~S~yP 199 (632)
..+|.-|.|.-=+|+||. -+....+ ..|+|.||++=-|= ..+.++++.|+. .+|+
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~L------------------~~l~~l~~~l~~-----~~~k 107 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKEDL------------------GDLPELLDLLRD-----RPYK 107 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHHh------------------ccHHHHHHHHhc-----CCCC
Confidence 468899999999999886 3333333 35999999954331 346688888884 4789
Q ss_pred eEEEeccCCCHHHHHHHHHHHHHHhccccCC
Q 042071 200 VVITFEDHLPPHLQGEVAALLTRIFDKEILL 230 (632)
Q Consensus 200 vILSlE~Hcs~~qQ~~mA~il~~ifGd~L~~ 230 (632)
-||=+.. .|.+....-.+.||.+|---|-.
T Consensus 108 FIlf~DD-LsFe~~d~~yk~LKs~LeGgle~ 137 (249)
T PF05673_consen 108 FILFCDD-LSFEEGDTEYKALKSVLEGGLEA 137 (249)
T ss_pred EEEEecC-CCCCCCcHHHHHHHHHhcCcccc
Confidence 9998886 88888888889999998555443
No 298
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=21.56 E-value=1e+02 Score=27.47 Aligned_cols=72 Identities=17% Similarity=0.272 Sum_probs=40.0
Q ss_pred ccccCCCCCCCCCccCcEEEEEEEcCCc-------cEEEEEEEeccCCCCCCCccEEEEEeCcccC--CC---ceEEEcc
Q 042071 549 TDQTEPIKDSWVPAWNKEFKFQLTVPEL-------ALLRIEIHERDDILQKDDFGGQTCLPVSELR--QG---IRAVPLH 616 (632)
Q Consensus 549 k~kTkvi~nn~nP~WNEtf~F~v~~pel-------a~Lrf~V~D~d~~~~~ddflGq~~lpL~~L~--~G---yR~ipL~ 616 (632)
...|.++. +.+|.+|-+-.|.|...++ ..++++++.-- ...-..+|.+.+++..+- .| +-.+.|.
T Consensus 12 tq~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~--g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~ 88 (107)
T PF11618_consen 12 TQTTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL--GSDFETLAAGQISLRPLLESNGERIHGSATLV 88 (107)
T ss_dssp -EE---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE---SS-EEEEEEEEE--SHHHH--S--EEEEEEE-
T ss_pred eeccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec--cCCeEEEEEEEeechhhhcCCCceEEEEEEEe
Confidence 34566665 6899999999999986553 46889998753 223567999999999875 23 5678898
Q ss_pred CCCCCcc
Q 042071 617 DRKGNEY 623 (632)
Q Consensus 617 d~~g~~~ 623 (632)
+..|+.+
T Consensus 89 g~~~~~~ 95 (107)
T PF11618_consen 89 GVSGEDF 95 (107)
T ss_dssp BSSS-TS
T ss_pred ccCCCeE
Confidence 8888843
No 299
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=21.39 E-value=1.3e+02 Score=22.44 Aligned_cols=30 Identities=17% Similarity=0.501 Sum_probs=24.8
Q ss_pred CChhHHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 042071 18 EPPEAIESLFNQYSEN--GIMTVDHLHRFLVE 47 (632)
Q Consensus 18 ~~r~ei~~if~~~~~~--~~lt~~~~~~FL~~ 47 (632)
.+..|+..||..+=.+ +.++.++|..+|..
T Consensus 22 ~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 22 LSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 5668899999998533 89999999999874
No 300
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=20.75 E-value=4.3e+02 Score=26.19 Aligned_cols=64 Identities=11% Similarity=0.301 Sum_probs=45.7
Q ss_pred ChhHHHHHHHHhhCC---CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHH
Q 042071 19 PPEAIESLFNQYSEN---GIMTVDHLHRFLVEVQKERNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYL 93 (632)
Q Consensus 19 ~r~ei~~if~~~~~~---~~lt~~~~~~FL~~~Q~e~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (632)
++.||...|..+... +.|+.++|+..+... .-...+...|+.+++-|.. ...+.+++..|+.=|
T Consensus 24 ~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~-fp~gd~~~y~~~vF~~fD~----------~~dg~i~F~Efi~al 90 (193)
T KOG0044|consen 24 SKKEIQQWYRGFKNECPSGRLTLEEFREIYASF-FPDGDASKYAELVFRTFDK----------NKDGTIDFLEFICAL 90 (193)
T ss_pred CHHHHHHHHHHhcccCCCCccCHHHHHHHHHHH-CCCCCHHHHHHHHHHHhcc----------cCCCCcCHHHHHHHH
Confidence 467999999999765 889999999998864 3233345567788887752 124678888877554
No 301
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT). This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].
Probab=20.37 E-value=82 Score=32.91 Aligned_cols=64 Identities=23% Similarity=0.325 Sum_probs=45.0
Q ss_pred CCccccccccccccccccCCcCCCCCChHHHHHHHhCCCcEEEEeecCCCCCCCCceEEecccc------cccccHHHHH
Q 042071 112 KAPLSHYFIYTGHNSYLTGNQLNSKCSAGPIKDALKRGLRGIELDLWPSSKKKDGVEVCHGGTL------TAPVDLTTCL 185 (632)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElDcWdG~~~~~ePiV~HG~Tl------Ts~i~f~dvi 185 (632)
+-=++.|||-+.||=.-- ++...+.|.-|- +|= +=+|+.||-.-. .-.++..|++
T Consensus 167 d~VvT~FFIDTA~Ni~~Y---------i~tI~~lLkpgG------~WI----N~GPLlyh~~~~~~~~~~sveLs~eEi~ 227 (270)
T PF07942_consen 167 DVVVTCFFIDTAENIIEY---------IETIEHLLKPGG------YWI----NFGPLLYHFEPMSIPNEMSVELSLEEIK 227 (270)
T ss_pred cEEEEEEEeechHHHHHH---------HHHHHHHhccCC------EEE----ecCCccccCCCCCCCCCcccCCCHHHHH
Confidence 334677888888873210 144455777666 565 347999997765 3568899999
Q ss_pred HHHhhcccc
Q 042071 186 ETIKNYAFD 194 (632)
Q Consensus 186 ~aI~~~AF~ 194 (632)
.+|++.+|.
T Consensus 228 ~l~~~~GF~ 236 (270)
T PF07942_consen 228 ELIEKLGFE 236 (270)
T ss_pred HHHHHCCCE
Confidence 999999996
No 302
>PRK09071 hypothetical protein; Validated
Probab=20.34 E-value=74 Score=34.12 Aligned_cols=58 Identities=19% Similarity=0.288 Sum_probs=37.5
Q ss_pred cCCCCCC--hHHHHHHHhCCCcEE----EEe--ecCCCC--------------CCCCceEEecc-cccccc-cHHHHHHH
Q 042071 132 QLNSKCS--AGPIKDALKRGLRGI----ELD--LWPSSK--------------KKDGVEVCHGG-TLTAPV-DLTTCLET 187 (632)
Q Consensus 132 Ql~g~SS--~e~Y~~aL~~GCRcv----ElD--cWdG~~--------------~~~ePiV~HG~-TlTs~i-~f~dvi~a 187 (632)
.++|++- +.++.+|++.-|.-+ .|| |++|.. .-|-||+-||. ..||+. .-.||+++
T Consensus 51 r~kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDvLea 130 (323)
T PRK09071 51 RVKEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQLLEA 130 (323)
T ss_pred HHcCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHHHHH
Confidence 3455543 346788887665433 366 788762 13578999997 456664 37888888
Q ss_pred Hh
Q 042071 188 IK 189 (632)
Q Consensus 188 I~ 189 (632)
+.
T Consensus 131 LG 132 (323)
T PRK09071 131 LG 132 (323)
T ss_pred CC
Confidence 73
No 303
>PRK07394 hypothetical protein; Provisional
Probab=20.18 E-value=77 Score=34.25 Aligned_cols=103 Identities=14% Similarity=0.201 Sum_probs=59.9
Q ss_pred HHHHHHHHHHcCC----CCCCHHHHHHHHHHhcccccCCCCCCcccCCCCCHHHHHHHHCCCCCCCCCCCCCccCCCCCc
Q 042071 39 DHLHRFLVEVQKE----RNPKKEDAQAIIDSMDDQLNLKHPHSSDQRKGLNLEAFFKYLLSEKNSPLCPSRGVHQDMKAP 114 (632)
Q Consensus 39 ~~~~~FL~~~Q~e----~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~l~~~~F~~~L~s~~n~~~~~~~~v~qDM~~P 114 (632)
++|..||+..-.- ...+.++|++++..+-. +..+-.+-..||+.
T Consensus 3 ~~~~~~i~~l~~g~~~~~~Lt~eea~~~~~~il~-------------g~~~~~q~aAfL~a------------------- 50 (342)
T PRK07394 3 ERFRELLKKVGSGEHTSKDLTREEAADALKLMLL-------------GEATPAQIGAFLIA------------------- 50 (342)
T ss_pred hHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHHc-------------CCCCHHHHHHHHHH-------------------
Confidence 5677788777322 35788888888887751 33444444444433
Q ss_pred cccccccccccccccCCcCCCCCC--hHHHHHHHhCCCcEEE--------Eee-cCCCC----------------CCCCc
Q 042071 115 LSHYFIYTGHNSYLTGNQLNSKCS--AGPIKDALKRGLRGIE--------LDL-WPSSK----------------KKDGV 167 (632)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~SS--~e~Y~~aL~~GCRcvE--------lDc-WdG~~----------------~~~eP 167 (632)
-.++|++. +.++++|++.-++-++ .+| |-|++ ..|-|
T Consensus 51 ----------------lr~KGET~eEiaG~~~a~~~~~~~~~~~~~~~~~d~~GtggDG~~~t~NiSt~aA~v~A~~Gv~ 114 (342)
T PRK07394 51 ----------------HRIKRPTPEELAGMLDTYDELGPKLQSPSNQRPPIVFGMPYDGRSRTAPIYPLTALILAAAGQP 114 (342)
T ss_pred ----------------HHhhCCCHHHHHHHHHHHHHhCCCCCCCCCCCceeEEeCCCCCCCCCcccHHHHHHHHHHCCCe
Confidence 23445443 2456777765433331 233 54442 13579
Q ss_pred eEEecc-ccccc--ccHHHHHHHHh
Q 042071 168 EVCHGG-TLTAP--VDLTTCLETIK 189 (632)
Q Consensus 168 iV~HG~-TlTs~--i~f~dvi~aI~ 189 (632)
|+-||. ..||+ |+-.||+++..
T Consensus 115 V~kHGnr~~ssk~GvtsaDvLe~LG 139 (342)
T PRK07394 115 VVLHGGDRMPTKYGVPLVELWQGLG 139 (342)
T ss_pred EEEECCCCCCCCCCchHHHHHHHCC
Confidence 999996 46666 55788888754
Done!