Query 042075
Match_columns 1033
No_of_seqs 1164 out of 6837
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 03:49:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.4E-84 1.2E-88 809.5 37.5 595 33-637 4-746 (768)
2 3rgz_A Protein brassinosteroid 100.0 6.1E-65 2.1E-69 635.6 28.0 515 85-610 127-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 5.5E-59 1.9E-63 576.7 39.5 562 71-635 4-626 (680)
4 4eco_A Uncharacterized protein 100.0 4.9E-61 1.7E-65 586.4 17.8 504 33-612 22-604 (636)
5 3t6q_A CD180 antigen; protein- 100.0 7.6E-58 2.6E-62 558.8 35.2 528 73-615 14-567 (606)
6 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-57 1.1E-61 553.2 35.2 534 69-620 5-570 (606)
7 4ecn_A Leucine-rich repeat pro 100.0 2.8E-58 9.7E-63 569.7 25.8 486 32-608 260-864 (876)
8 1ziw_A TOLL-like receptor 3; i 100.0 6E-57 2.1E-61 558.4 37.0 522 84-613 49-627 (680)
9 3j0a_A TOLL-like receptor 5; m 100.0 5.1E-56 1.7E-60 560.8 36.8 520 71-614 14-566 (844)
10 3t6q_A CD180 antigen; protein- 100.0 7.5E-56 2.6E-60 541.1 33.6 530 88-635 16-564 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-54 4.5E-59 530.1 32.8 527 88-636 15-563 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-53 5.5E-58 537.9 38.3 521 89-635 9-564 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 2E-52 6.9E-57 504.6 27.2 492 70-614 3-516 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 2.2E-51 7.5E-56 498.1 30.1 511 84-635 28-560 (570)
15 3omv_A RAF proto-oncogene seri 100.0 3.6E-51 1.2E-55 446.1 22.0 264 710-1021 35-303 (307)
16 4aoj_A High affinity nerve gro 100.0 1.9E-51 6.6E-56 455.1 19.9 269 711-1019 41-320 (329)
17 4asz_A BDNF/NT-3 growth factor 100.0 5.9E-52 2E-56 452.7 14.3 270 711-1020 13-291 (299)
18 4gt4_A Tyrosine-protein kinase 100.0 1.5E-50 5.3E-55 443.5 17.9 265 712-1016 27-304 (308)
19 2z63_A TOLL-like receptor 4, v 100.0 2.4E-49 8.1E-54 480.2 28.5 505 95-635 18-535 (570)
20 2z7x_B TOLL-like receptor 1, v 100.0 3.3E-50 1.1E-54 481.6 20.5 457 88-614 4-487 (520)
21 4g8a_A TOLL-like receptor 4; l 100.0 9.9E-49 3.4E-53 481.2 33.7 539 59-614 11-586 (635)
22 4fih_A Serine/threonine-protei 100.0 3.8E-50 1.3E-54 443.2 18.4 251 711-1012 74-324 (346)
23 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-49 3.9E-54 480.5 22.0 479 71-588 12-514 (549)
24 4b9d_A Serine/threonine-protei 100.0 5.2E-50 1.8E-54 442.9 16.9 253 710-1012 23-277 (350)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.9E-50 1.7E-54 435.6 14.8 250 711-1011 32-284 (311)
26 4ase_A Vascular endothelial gr 100.0 1.2E-49 4.1E-54 444.1 17.6 275 708-1020 61-349 (353)
27 4g3f_A NF-kappa-beta-inducing 100.0 2.2E-49 7.4E-54 436.0 19.0 258 710-1020 57-318 (336)
28 3fpq_A Serine/threonine-protei 100.0 4.4E-49 1.5E-53 426.6 20.6 251 714-1011 29-282 (290)
29 4eco_A Uncharacterized protein 100.0 9.7E-50 3.3E-54 486.7 15.0 450 108-633 81-602 (636)
30 4fie_A Serine/threonine-protei 100.0 1.3E-48 4.6E-53 441.5 21.3 251 711-1012 151-401 (423)
31 4ecn_A Leucine-rich repeat pro 100.0 6.3E-49 2.2E-53 486.2 19.8 439 108-613 323-845 (876)
32 3hmm_A TGF-beta receptor type- 100.0 2.2E-48 7.5E-53 427.9 21.0 281 711-1019 3-298 (303)
33 3hyh_A Carbon catabolite-derep 100.0 2.1E-48 7.2E-53 417.3 20.3 248 710-1012 12-263 (275)
34 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-47 4.5E-52 459.1 20.1 451 111-634 3-484 (520)
35 3ubd_A Ribosomal protein S6 ki 100.0 6.5E-48 2.2E-52 419.3 12.8 243 711-1006 24-271 (304)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.6E-47 3.3E-51 455.4 23.1 460 87-616 34-518 (562)
37 4g31_A Eukaryotic translation 100.0 3.9E-47 1.3E-51 415.5 17.8 257 711-1011 5-279 (299)
38 4g8a_A TOLL-like receptor 4; l 100.0 5.4E-46 1.9E-50 456.9 28.4 530 89-635 36-584 (635)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.5E-46 1.9E-50 448.8 22.3 441 84-588 52-514 (562)
40 4b99_A Mitogen-activated prote 100.0 1.4E-45 4.8E-50 418.7 20.4 287 710-1012 53-345 (398)
41 1ogq_A PGIP-2, polygalacturona 100.0 4.9E-45 1.7E-49 405.4 18.4 295 36-335 1-302 (313)
42 4f9c_A Cell division cycle 7-r 100.0 1.1E-44 3.6E-49 407.3 18.7 200 708-930 18-249 (361)
43 1jl5_A Outer protein YOPM; leu 100.0 6E-44 2E-48 416.5 22.2 392 101-609 4-410 (454)
44 3v47_A TOLL-like receptor 5B a 100.0 3.7E-43 1.3E-47 413.1 22.8 393 112-616 14-416 (455)
45 3v5w_A G-protein coupled recep 100.0 3.2E-43 1.1E-47 414.4 20.3 251 710-1012 188-450 (689)
46 3uto_A Twitchin; kinase, muscl 100.0 9.7E-43 3.3E-47 415.4 22.6 254 710-1012 156-411 (573)
47 3v47_A TOLL-like receptor 5B a 100.0 2E-42 6.7E-47 407.0 22.8 387 69-540 6-412 (455)
48 2qkw_B Protein kinase; three-h 100.0 7.2E-42 2.5E-46 382.3 24.4 286 701-1019 29-316 (321)
49 1jl5_A Outer protein YOPM; leu 100.0 7.8E-42 2.7E-46 398.6 24.1 407 84-613 11-434 (454)
50 3uim_A Brassinosteroid insensi 100.0 1.3E-41 4.5E-46 381.2 22.2 290 696-1016 15-309 (326)
51 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-41 5.3E-46 377.7 22.1 266 710-1022 9-286 (310)
52 3fxz_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 372.0 21.4 252 710-1012 19-270 (297)
53 3soc_A Activin receptor type-2 100.0 3.4E-41 1.2E-45 376.7 19.7 285 709-1019 22-319 (322)
54 2nru_A Interleukin-1 receptor- 100.0 6.3E-40 2.2E-44 364.2 28.7 284 697-1018 11-306 (307)
55 2psq_A Fibroblast growth facto 100.0 1.3E-40 4.5E-45 378.7 23.1 272 710-1021 80-367 (370)
56 3bz5_A Internalin-J, INLJ; leu 100.0 2.4E-40 8.4E-45 386.3 25.5 361 99-614 33-393 (457)
57 3ugc_A Tyrosine-protein kinase 100.0 2.2E-41 7.6E-46 373.6 14.8 279 710-1021 9-294 (295)
58 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-41 7.3E-46 386.7 14.4 262 709-1019 112-375 (377)
59 3p86_A Serine/threonine-protei 100.0 9.4E-41 3.2E-45 370.4 18.7 264 708-1021 34-301 (309)
60 2c30_A Serine/threonine-protei 100.0 2.2E-40 7.6E-45 369.7 21.1 263 699-1012 23-295 (321)
61 3lb7_A RAF proto-oncogene seri 100.0 3.8E-40 1.3E-44 365.3 22.8 265 709-1021 34-303 (307)
62 3tki_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 371.5 19.3 255 710-1012 6-262 (323)
63 3fe3_A MAP/microtubule affinit 100.0 1.5E-40 5.1E-45 371.3 19.4 251 708-1012 12-265 (328)
64 3q4u_A Activin receptor type-1 100.0 3.9E-40 1.3E-44 364.8 22.4 266 710-1016 7-300 (301)
65 3vhe_A Vascular endothelial gr 100.0 1.8E-40 6E-45 377.5 19.3 281 702-1020 13-357 (359)
66 3zgw_A Maternal embryonic leuc 100.0 2.2E-40 7.7E-45 371.8 18.6 252 709-1012 8-261 (347)
67 3kul_A Ephrin type-A receptor 100.0 2.3E-40 7.9E-45 370.2 18.7 264 710-1022 48-317 (325)
68 4eqm_A Protein kinase; transfe 100.0 3E-40 1E-44 364.0 18.8 264 710-1020 10-277 (294)
69 2yab_A Death-associated protei 100.0 1.3E-39 4.6E-44 367.9 23.5 253 709-1011 10-272 (361)
70 4hcu_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 357.1 19.2 258 710-1019 9-267 (269)
71 1tki_A Titin; serine kinase, m 100.0 1.2E-39 4.1E-44 363.4 22.0 253 710-1012 4-258 (321)
72 4euu_A Serine/threonine-protei 100.0 1.8E-39 6.3E-44 362.4 23.1 286 710-1017 8-308 (319)
73 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-40 7.6E-45 376.7 15.6 268 710-1020 70-347 (367)
74 1o6l_A RAC-beta serine/threoni 100.0 1.3E-39 4.5E-44 364.6 21.3 250 710-1012 4-261 (337)
75 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.8E-40 3.4E-44 355.0 19.3 260 709-1020 6-266 (268)
76 2qol_A Ephrin receptor; recept 100.0 4.5E-40 1.5E-44 374.6 16.7 262 710-1020 44-311 (373)
77 2zv2_A Calcium/calmodulin-depe 100.0 9.5E-40 3.3E-44 361.0 18.7 253 710-1012 12-293 (298)
78 2y0a_A Death-associated protei 100.0 3.4E-39 1.2E-43 360.9 23.0 253 710-1012 10-272 (326)
79 3op5_A Serine/threonine-protei 100.0 8.2E-40 2.8E-44 372.2 17.8 277 709-1021 33-332 (364)
80 3poz_A Epidermal growth factor 100.0 9.3E-40 3.2E-44 365.9 17.8 260 710-1019 14-279 (327)
81 2ivs_A Proto-oncogene tyrosine 100.0 2.5E-39 8.6E-44 360.6 20.9 270 710-1019 22-312 (314)
82 3o0g_A Cell division protein k 100.0 2.1E-39 7.2E-44 357.2 20.0 277 711-1012 2-283 (292)
83 1k9a_A Carboxyl-terminal SRC k 100.0 2.8E-39 9.5E-44 377.7 21.7 254 710-1019 192-446 (450)
84 4f0f_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 357.7 18.0 253 710-1016 18-287 (287)
85 1kob_A Twitchin; kinase, intra 100.0 4.5E-39 1.5E-43 366.9 22.8 254 710-1012 50-305 (387)
86 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-39 5E-44 363.8 18.1 248 710-1012 8-259 (336)
87 3c0i_A Peripheral plasma membr 100.0 1.2E-39 4E-44 368.5 17.6 257 710-1012 23-287 (351)
88 1luf_A Muscle-specific tyrosin 100.0 1.2E-39 4E-44 368.2 17.4 276 707-1022 43-339 (343)
89 3tt0_A Basic fibroblast growth 100.0 4E-39 1.4E-43 368.7 22.1 275 710-1024 68-358 (382)
90 2izr_A Casein kinase I isoform 100.0 2E-39 7E-44 363.8 19.2 264 710-1020 8-283 (330)
91 2bdw_A Hypothetical protein K1 100.0 3.7E-39 1.3E-43 365.4 21.4 253 710-1012 28-285 (362)
92 3soa_A Calcium/calmodulin-depe 100.0 5.2E-39 1.8E-43 372.6 23.1 255 709-1012 9-268 (444)
93 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-39 7.2E-44 361.4 19.0 286 710-1012 4-294 (317)
94 3gen_A Tyrosine-protein kinase 100.0 1.6E-39 5.5E-44 356.4 17.8 260 708-1019 21-281 (283)
95 1csn_A Casein kinase-1; phosph 100.0 4.1E-39 1.4E-43 356.0 21.0 265 710-1021 9-286 (298)
96 4dc2_A Protein kinase C IOTA t 100.0 1.5E-39 5.2E-44 370.6 17.8 249 710-1006 51-307 (396)
97 4fr4_A YANK1, serine/threonine 100.0 4.8E-39 1.7E-43 365.2 21.8 251 710-1011 14-271 (384)
98 3kex_A Receptor tyrosine-prote 100.0 1.9E-39 6.3E-44 363.3 18.1 260 710-1019 12-277 (325)
99 3brb_A Proto-oncogene tyrosine 100.0 2.1E-39 7.2E-44 361.0 18.4 278 705-1021 28-311 (313)
100 3qup_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 363.5 17.8 274 708-1020 20-300 (323)
101 3og7_A AKAP9-BRAF fusion prote 100.0 3.2E-39 1.1E-43 355.0 19.6 261 709-1017 22-287 (289)
102 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-39 3.8E-44 367.7 16.3 250 709-1011 21-280 (353)
103 1rjb_A FL cytokine receptor; k 100.0 2E-39 7E-44 366.3 18.1 276 709-1023 43-339 (344)
104 2xir_A Vascular endothelial gr 100.0 2.6E-39 8.8E-44 360.9 18.7 283 702-1022 18-314 (316)
105 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-38 3.9E-43 372.1 24.8 354 84-544 42-395 (457)
106 1t46_A HOMO sapiens V-KIT hard 100.0 4E-39 1.4E-43 358.8 19.8 273 709-1020 21-309 (313)
107 3g2f_A Bone morphogenetic prot 100.0 1.5E-39 5E-44 366.2 16.4 289 710-1025 12-325 (336)
108 3lxl_A Tyrosine-protein kinase 100.0 1.1E-39 3.9E-44 365.5 15.2 280 710-1021 22-306 (327)
109 3g33_A Cell division protein k 100.0 7.7E-39 2.6E-43 355.6 21.7 283 709-1012 7-297 (308)
110 3niz_A Rhodanese family protei 100.0 6.6E-39 2.2E-43 356.2 21.0 279 708-1011 18-300 (311)
111 1mp8_A Focal adhesion kinase 1 100.0 4.7E-39 1.6E-43 352.2 19.2 261 709-1020 13-278 (281)
112 3a8x_A Protein kinase C IOTA t 100.0 4.1E-39 1.4E-43 362.3 18.8 249 710-1006 8-264 (345)
113 2w4o_A Calcium/calmodulin-depe 100.0 5.4E-39 1.9E-43 362.6 19.7 253 709-1012 51-306 (349)
114 3ttj_A Mitogen-activated prote 100.0 9.2E-39 3.2E-43 373.7 22.3 284 709-1012 60-356 (464)
115 3pls_A Macrophage-stimulating 100.0 1.1E-38 3.8E-43 352.6 21.8 268 712-1026 22-295 (298)
116 1fot_A TPK1 delta, CAMP-depend 100.0 6.4E-39 2.2E-43 356.4 19.9 247 710-1012 5-259 (318)
117 2pvf_A Fibroblast growth facto 100.0 8.3E-39 2.8E-43 359.5 21.0 275 710-1024 34-324 (334)
118 2yex_A Serine/threonine-protei 100.0 9.1E-39 3.1E-43 349.0 20.7 254 710-1011 6-261 (276)
119 3v8s_A RHO-associated protein 100.0 1.2E-39 3.9E-44 373.7 14.2 260 704-1012 62-330 (410)
120 3kfa_A Tyrosine-protein kinase 100.0 3.1E-39 1.1E-43 355.0 17.1 264 708-1021 10-274 (288)
121 3f66_A Hepatocyte growth facto 100.0 8.9E-39 3E-43 353.3 20.7 266 711-1024 25-297 (298)
122 1xjd_A Protein kinase C, theta 100.0 3E-39 1E-43 362.7 17.0 250 708-1010 14-268 (345)
123 2eva_A TAK1 kinase - TAB1 chim 100.0 9.4E-39 3.2E-43 354.4 20.8 259 711-1022 8-267 (307)
124 3rp9_A Mitogen-activated prote 100.0 3.8E-39 1.3E-43 378.6 18.7 202 709-924 51-280 (458)
125 3dtc_A Mitogen-activated prote 100.0 2.2E-39 7.6E-44 352.9 15.5 254 710-1016 6-271 (271)
126 3c1x_A Hepatocyte growth facto 100.0 4.4E-39 1.5E-43 365.9 18.5 266 712-1025 90-362 (373)
127 3qd2_B Eukaryotic translation 100.0 1E-38 3.5E-43 358.6 21.4 259 710-1012 5-326 (332)
128 2buj_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44 360.8 16.6 275 710-1024 28-312 (317)
129 4fvq_A Tyrosine-protein kinase 100.0 2.9E-39 9.8E-44 355.6 16.4 255 710-1020 7-277 (289)
130 3gni_B Strad alpha; kinase fol 100.0 5E-39 1.7E-43 369.3 19.0 283 709-1012 23-334 (389)
131 1qcf_A Haematopoetic cell kina 100.0 9.4E-40 3.2E-44 382.4 13.2 263 709-1023 186-449 (454)
132 4e5w_A Tyrosine-protein kinase 100.0 2.6E-39 9.1E-44 358.3 16.1 275 711-1017 21-301 (302)
133 4aw2_A Serine/threonine-protei 100.0 5.7E-39 1.9E-43 370.8 19.2 264 703-1012 66-339 (437)
134 1opk_A P150, C-ABL, proto-onco 100.0 3.2E-39 1.1E-43 381.4 17.6 258 710-1017 219-477 (495)
135 3lzb_A Epidermal growth factor 100.0 4.4E-39 1.5E-43 360.1 17.8 260 710-1019 14-279 (327)
136 4hgt_A Casein kinase I isoform 100.0 1.9E-38 6.4E-43 350.3 22.5 267 709-1021 7-283 (296)
137 1o6v_A Internalin A; bacterial 100.0 4.9E-38 1.7E-42 369.9 27.5 146 107-265 45-190 (466)
138 3llt_A Serine/threonine kinase 100.0 6.2E-39 2.1E-43 364.7 18.9 210 698-930 22-261 (360)
139 3uc3_A Serine/threonine-protei 100.0 8E-39 2.7E-43 362.8 19.6 255 709-1012 18-275 (361)
140 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-38 8.4E-43 349.4 23.0 267 709-1021 7-283 (296)
141 4eut_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 368.6 19.2 288 710-1019 8-310 (396)
142 3n9x_A Phosphotransferase; mal 100.0 8.4E-39 2.9E-43 371.9 20.2 207 709-929 24-253 (432)
143 2i1m_A Macrophage colony-stimu 100.0 4.2E-39 1.4E-43 362.0 17.1 278 706-1022 41-330 (333)
144 3f3z_A Calcium/calmodulin-depe 100.0 7.7E-39 2.6E-43 349.8 18.4 252 710-1012 8-262 (277)
145 2x4f_A Myosin light chain kina 100.0 1.6E-38 5.6E-43 361.4 21.6 248 716-1012 94-343 (373)
146 3mdy_A Bone morphogenetic prot 100.0 5.4E-38 1.8E-42 353.6 25.3 276 707-1020 33-333 (337)
147 2h34_A Serine/threonine-protei 100.0 7.8E-39 2.7E-43 355.5 18.0 273 709-1030 32-308 (309)
148 3ork_A Serine/threonine protei 100.0 1.5E-39 5.2E-44 361.7 12.2 265 710-1017 11-280 (311)
149 3kmu_A ILK, integrin-linked ki 100.0 7.5E-39 2.6E-43 348.6 17.3 255 710-1018 9-270 (271)
150 2w1i_A JAK2; chromosomal rearr 100.0 5.3E-39 1.8E-43 359.8 16.6 276 710-1021 40-325 (326)
151 3t9t_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 346.5 18.6 258 710-1019 7-265 (267)
152 4agu_A Cyclin-dependent kinase 100.0 6.4E-39 2.2E-43 356.8 17.0 272 710-1012 2-285 (311)
153 3cc6_A Protein tyrosine kinase 100.0 1.4E-38 4.7E-43 348.6 19.3 261 709-1020 10-275 (281)
154 1ob3_A PFPK5, cell division co 100.0 1.3E-38 4.4E-43 350.1 19.1 274 711-1011 2-280 (288)
155 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-38 4.3E-43 358.9 19.3 247 710-1012 40-294 (350)
156 3lxp_A Non-receptor tyrosine-p 100.0 2.6E-39 8.8E-44 360.9 13.6 271 713-1023 33-315 (318)
157 2a2a_A Death-associated protei 100.0 3.1E-38 1.1E-42 352.7 22.4 253 710-1012 11-273 (321)
158 3kk8_A Calcium/calmodulin depe 100.0 3.6E-38 1.2E-42 345.8 22.4 253 710-1012 5-262 (284)
159 1qpc_A LCK kinase; alpha beta 100.0 2E-38 6.7E-43 347.0 20.2 265 709-1025 11-276 (279)
160 2wqm_A Serine/threonine-protei 100.0 1.9E-38 6.6E-43 352.8 20.4 269 709-1022 30-301 (310)
161 2i0e_A Protein kinase C-beta I 100.0 1.3E-38 4.5E-43 358.6 19.3 250 709-1011 18-276 (353)
162 3oz6_A Mitogen-activated prote 100.0 1.1E-38 3.8E-43 366.2 19.0 204 709-930 7-233 (388)
163 3qyz_A Mitogen-activated prote 100.0 9.2E-39 3.1E-43 363.5 17.9 292 704-1012 20-314 (364)
164 2v62_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 362.6 15.6 269 710-1018 36-328 (345)
165 1p4o_A Insulin-like growth fac 100.0 4.3E-39 1.5E-43 360.1 14.6 277 702-1018 16-299 (322)
166 2y94_A 5'-AMP-activated protei 100.0 2.7E-38 9.1E-43 368.9 21.7 249 710-1012 15-267 (476)
167 2vd5_A DMPK protein; serine/th 100.0 5.5E-39 1.9E-43 368.3 15.6 262 704-1012 54-328 (412)
168 1o6v_A Internalin A; bacterial 100.0 7.8E-38 2.7E-42 368.2 25.8 167 85-266 47-213 (466)
169 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-38 4.8E-43 353.7 18.4 245 711-1011 57-304 (311)
170 1byg_A CSK, protein (C-termina 100.0 1.2E-38 4.1E-43 348.4 17.6 255 710-1020 20-275 (278)
171 2eue_A Carbon catabolite derep 100.0 1.6E-38 5.5E-43 346.8 18.4 248 710-1012 12-263 (275)
172 3dls_A PAS domain-containing s 100.0 8.1E-39 2.8E-43 359.0 16.4 243 710-1012 23-275 (335)
173 1cm8_A Phosphorylated MAP kina 100.0 1.5E-38 5.1E-43 361.4 18.3 282 709-1012 23-308 (367)
174 3hko_A Calcium/calmodulin-depe 100.0 1.4E-38 4.8E-43 359.6 18.1 271 705-1012 20-331 (345)
175 1b6c_B TGF-B superfamily recep 100.0 7.7E-38 2.6E-42 353.1 24.0 278 702-1020 33-338 (342)
176 2a19_B Interferon-induced, dou 100.0 9.7E-39 3.3E-43 350.3 16.1 257 710-1021 10-277 (284)
177 1t4h_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 346.6 20.7 253 711-1012 26-283 (290)
178 3kn6_A Ribosomal protein S6 ki 100.0 8.6E-39 3E-43 357.3 15.7 249 716-1011 16-270 (325)
179 1nxk_A MAP kinase-activated pr 100.0 2E-38 6.8E-43 364.4 19.0 255 710-1012 60-322 (400)
180 1u59_A Tyrosine-protein kinase 100.0 5E-38 1.7E-42 345.2 21.3 269 710-1028 8-282 (287)
181 3cok_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 347.5 17.1 251 709-1011 9-262 (278)
182 2id5_A Lingo-1, leucine rich r 100.0 2.1E-38 7.2E-43 374.8 19.5 231 383-638 132-363 (477)
183 3fdn_A Serine/threonine-protei 100.0 2.5E-38 8.5E-43 346.1 18.5 249 709-1012 7-258 (279)
184 1xbb_A Tyrosine-protein kinase 100.0 1.8E-38 6.3E-43 349.4 17.5 265 708-1023 13-284 (291)
185 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4E-39 1.4E-43 376.6 12.8 261 709-1021 182-443 (452)
186 3dbq_A Dual specificity protei 100.0 1.3E-38 4.4E-43 359.2 16.3 252 710-1012 8-274 (343)
187 3nsz_A CK II alpha, casein kin 100.0 2.7E-38 9.3E-43 354.9 18.8 278 710-1012 35-320 (330)
188 2ac3_A MAP kinase-interacting 100.0 4.7E-38 1.6E-42 350.7 20.5 270 710-1012 11-296 (316)
189 1mqb_A Ephrin type-A receptor 100.0 5.6E-38 1.9E-42 352.3 21.2 263 710-1021 43-312 (333)
190 2acx_A G protein-coupled recep 100.0 1.9E-38 6.6E-43 374.4 18.1 255 710-1012 183-445 (576)
191 3oja_B Anopheles plasmodium-re 100.0 5E-38 1.7E-42 381.3 22.2 385 56-643 4-392 (597)
192 3mtl_A Cell division protein k 100.0 6.8E-39 2.3E-43 358.4 13.4 276 711-1012 2-282 (324)
193 2jii_A Serine/threonine-protei 100.0 1E-38 3.4E-43 361.6 15.0 269 710-1021 41-339 (352)
194 3i6u_A CDS1, serine/threonine- 100.0 6.3E-38 2.2E-42 362.7 21.9 255 708-1012 132-400 (419)
195 3a62_A Ribosomal protein S6 ki 100.0 3.5E-38 1.2E-42 352.8 19.1 250 710-1012 16-277 (327)
196 2yfx_A Tyrosine-protein kinase 100.0 2.5E-38 8.7E-43 354.5 18.0 268 710-1020 29-306 (327)
197 3is5_A Calcium-dependent prote 100.0 2.3E-38 7.8E-43 347.4 17.2 254 710-1011 21-278 (285)
198 3lm5_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 351.5 20.6 269 696-1012 13-288 (327)
199 3gxj_A TGF-beta receptor type- 100.0 6.2E-40 2.1E-44 363.5 4.2 277 710-1019 2-298 (303)
200 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-38 5.6E-43 356.1 15.7 279 707-1011 30-318 (329)
201 2fst_X Mitogen-activated prote 100.0 1.6E-38 5.6E-43 360.6 15.9 283 708-1012 26-312 (367)
202 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-38 7.5E-43 355.9 16.5 254 709-1012 20-278 (342)
203 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2E-38 6.8E-43 361.0 16.4 261 707-1020 61-341 (365)
204 3bhy_A Death-associated protei 100.0 1E-37 3.5E-42 342.0 21.4 258 711-1018 5-274 (283)
205 2zmd_A Dual specificity protei 100.0 2.9E-38 1E-42 361.9 17.7 251 711-1012 56-321 (390)
206 1u5q_A Serine/threonine protei 100.0 2.5E-38 8.5E-43 356.6 16.6 247 711-1012 54-306 (348)
207 2r5t_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 361.5 14.0 248 710-1010 37-288 (373)
208 3ll6_A Cyclin G-associated kin 100.0 5.6E-38 1.9E-42 353.4 19.3 269 706-1020 23-310 (337)
209 4ejn_A RAC-alpha serine/threon 100.0 1.8E-38 6.3E-43 371.0 14.9 250 710-1012 147-405 (446)
210 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-37 4.3E-42 345.0 20.7 252 710-1014 21-273 (303)
211 2jam_A Calcium/calmodulin-depe 100.0 9E-38 3.1E-42 346.3 19.5 252 710-1012 8-262 (304)
212 2rku_A Serine/threonine-protei 100.0 8E-38 2.8E-42 344.9 18.9 250 710-1012 14-266 (294)
213 2w5a_A Serine/threonine-protei 100.0 2.3E-38 8E-43 346.4 14.4 259 710-1014 5-270 (279)
214 2y7j_A Phosphorylase B kinase 100.0 2.2E-37 7.4E-42 351.7 22.9 259 703-1011 86-359 (365)
215 3pg1_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 358.2 16.8 282 702-1012 13-317 (362)
216 3mi9_A Cell division protein k 100.0 9.8E-38 3.4E-42 353.5 19.9 286 710-1012 16-312 (351)
217 3sv0_A Casein kinase I-like; t 100.0 1.2E-37 4.1E-42 364.1 20.9 266 710-1021 6-281 (483)
218 4aaa_A Cyclin-dependent kinase 100.0 1.7E-38 5.9E-43 356.5 13.2 280 709-1012 23-307 (331)
219 2x7f_A TRAF2 and NCK-interacti 100.0 5.4E-38 1.8E-42 351.8 17.1 273 695-1012 8-287 (326)
220 1fvr_A Tyrosine-protein kinase 100.0 5.9E-38 2E-42 351.6 17.4 267 711-1020 25-302 (327)
221 2clq_A Mitogen-activated prote 100.0 1.5E-37 5.1E-42 342.9 20.1 253 712-1011 23-278 (295)
222 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.2E-38 2.8E-42 368.5 19.2 257 710-1011 184-448 (543)
223 2owb_A Serine/threonine-protei 100.0 8.5E-38 2.9E-42 351.3 18.3 251 709-1012 39-292 (335)
224 2xrw_A Mitogen-activated prote 100.0 1.8E-37 6E-42 353.7 21.1 282 710-1012 24-319 (371)
225 2vgo_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 341.1 19.4 248 710-1012 13-263 (284)
226 1ua2_A CAK, cell division prot 100.0 1.3E-37 4.6E-42 351.3 19.7 281 707-1012 6-292 (346)
227 3eb0_A Putative uncharacterize 100.0 6.7E-38 2.3E-42 358.9 17.0 291 707-1018 3-330 (383)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-37 3.7E-42 353.6 18.1 288 709-1012 9-306 (353)
229 3byv_A Rhoptry kinase; malaria 100.0 2.6E-38 8.7E-43 361.6 12.8 260 710-1019 72-369 (377)
230 3mwu_A Calmodulin-domain prote 100.0 1.1E-37 3.6E-42 368.8 18.2 252 710-1012 21-277 (486)
231 2ycf_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42 347.3 18.6 252 710-1011 9-274 (322)
232 2ozo_A Tyrosine-protein kinase 100.0 1.5E-37 5.1E-42 375.8 19.7 260 712-1021 336-601 (613)
233 2wtk_C Serine/threonine-protei 100.0 4.6E-37 1.6E-41 340.8 22.1 255 710-1012 4-264 (305)
234 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-38 5.5E-43 378.9 11.0 261 709-1021 265-526 (535)
235 2h6d_A 5'-AMP-activated protei 100.0 2.3E-37 8E-42 337.8 19.1 249 710-1012 10-262 (276)
236 1u46_A ACK-1, activated CDC42 100.0 3.5E-38 1.2E-42 347.2 12.3 263 710-1021 17-287 (291)
237 3com_A Serine/threonine-protei 100.0 2.9E-37 1E-41 343.9 19.9 253 709-1012 27-279 (314)
238 2j7t_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 347.1 14.5 254 709-1011 17-275 (302)
239 3eqc_A Dual specificity mitoge 100.0 3.2E-38 1.1E-42 358.7 12.4 200 710-930 32-232 (360)
240 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-37 7.3E-42 340.4 18.3 248 710-1012 10-280 (289)
241 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-37 7.8E-42 367.5 19.9 253 709-1012 34-302 (504)
242 3nyv_A Calmodulin-domain prote 100.0 6.8E-38 2.3E-42 370.6 15.2 252 710-1012 25-282 (484)
243 2r3i_A Cell division protein k 100.0 2.8E-37 9.6E-42 341.5 19.1 277 710-1011 2-283 (299)
244 1phk_A Phosphorylase kinase; g 100.0 6.6E-37 2.3E-41 338.3 21.9 253 709-1011 15-283 (298)
245 3lij_A Calcium/calmodulin depe 100.0 3.9E-37 1.3E-41 364.6 21.2 252 710-1012 36-292 (494)
246 4exu_A Mitogen-activated prote 100.0 2.4E-37 8.3E-42 352.5 18.5 281 709-1012 40-324 (371)
247 4fl3_A Tyrosine-protein kinase 100.0 2E-37 7E-42 375.3 18.9 252 717-1019 375-632 (635)
248 3fme_A Dual specificity mitoge 100.0 1.6E-37 5.6E-42 341.7 16.4 257 709-1012 5-267 (290)
249 3kvw_A DYRK2, dual specificity 100.0 4E-37 1.4E-41 356.9 20.1 199 710-931 96-302 (429)
250 3q60_A ROP5B; pseudokinase, tr 100.0 6.8E-38 2.3E-42 357.3 13.3 266 710-1017 61-360 (371)
251 2vwi_A Serine/threonine-protei 100.0 5.8E-38 2E-42 347.7 12.3 270 709-1012 13-288 (303)
252 3e3p_A Protein kinase, putativ 100.0 4.1E-37 1.4E-41 349.8 19.5 292 704-1012 16-315 (360)
253 2i6l_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 344.0 18.6 285 710-1012 10-306 (320)
254 1vzo_A Ribosomal protein S6 ki 100.0 9.9E-38 3.4E-42 353.3 13.8 256 710-1013 53-323 (355)
255 3o6n_A APL1; leucine-rich repe 100.0 1.7E-36 5.7E-41 348.6 23.9 349 61-488 3-353 (390)
256 1wak_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 354.2 19.4 284 710-1011 36-391 (397)
257 2id5_A Lingo-1, leucine rich r 100.0 1.1E-36 3.9E-41 359.9 23.0 151 386-560 183-333 (477)
258 3an0_A Dual specificity mitoge 100.0 2.8E-37 9.6E-42 348.1 16.6 258 708-1012 48-311 (340)
259 3pfq_A PKC-B, PKC-beta, protei 100.0 5.9E-37 2E-41 373.9 20.2 250 709-1011 339-597 (674)
260 1z57_A Dual specificity protei 100.0 8.2E-37 2.8E-41 344.1 19.5 278 710-1012 13-329 (339)
261 1blx_A Cyclin-dependent kinase 100.0 1.2E-36 4.1E-41 340.9 20.2 283 708-1011 8-296 (326)
262 1j1b_A Glycogen synthase kinas 100.0 4.2E-37 1.4E-41 355.9 16.7 278 711-1012 54-337 (420)
263 2pml_X PFPK7, Ser/Thr protein 100.0 7E-37 2.4E-41 346.1 18.1 272 710-1012 30-323 (348)
264 3cek_A Dual specificity protei 100.0 2.5E-37 8.5E-42 344.2 14.0 264 698-1012 15-293 (313)
265 3coi_A Mitogen-activated prote 100.0 9E-37 3.1E-41 345.8 18.2 280 710-1012 23-306 (353)
266 4e7w_A Glycogen synthase kinas 100.0 5.8E-37 2E-41 351.9 15.9 279 710-1012 39-322 (394)
267 2wei_A Calmodulin-domain prote 100.0 8.8E-37 3E-41 335.3 16.2 253 709-1012 20-277 (287)
268 2vx3_A Dual specificity tyrosi 100.0 1.6E-36 5.6E-41 347.3 18.7 204 706-930 49-260 (382)
269 1zy4_A Serine/threonine-protei 100.0 9.8E-37 3.4E-41 337.6 16.3 259 710-1012 5-284 (303)
270 3fhr_A MAP kinase-activated pr 100.0 1.9E-36 6.5E-41 340.1 18.4 259 709-1012 26-288 (336)
271 2j0j_A Focal adhesion kinase 1 100.0 1.8E-36 6E-41 368.5 19.0 261 708-1019 387-652 (656)
272 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.3E-37 1.5E-41 343.4 12.3 268 702-1021 24-305 (319)
273 2eu9_A Dual specificity protei 100.0 3.3E-36 1.1E-40 341.6 18.6 279 710-1012 18-334 (355)
274 3rgf_A Cyclin-dependent kinase 100.0 2.4E-36 8.2E-41 348.8 17.7 210 712-931 21-239 (405)
275 4fcg_A Uncharacterized protein 100.0 1.6E-36 5.6E-41 338.8 15.1 277 32-314 18-314 (328)
276 2iwi_A Serine/threonine-protei 100.0 9.6E-37 3.3E-41 339.4 13.1 247 705-1012 25-284 (312)
277 1q8y_A SR protein kinase; tran 100.0 2.5E-36 8.7E-41 345.1 16.9 285 710-1012 18-334 (373)
278 3a99_A Proto-oncogene serine/t 100.0 6.8E-37 2.3E-41 341.5 11.3 245 707-1012 39-294 (320)
279 3aln_A Dual specificity mitoge 100.0 3.1E-36 1.1E-40 337.6 16.2 260 710-1012 21-286 (327)
280 3qa8_A MGC80376 protein; kinas 100.0 4.3E-36 1.5E-40 357.3 16.1 286 710-1018 13-309 (676)
281 1ogq_A PGIP-2, polygalacturona 100.0 1E-35 3.6E-40 330.3 16.4 257 379-637 50-310 (313)
282 2dyl_A Dual specificity mitoge 100.0 9.4E-36 3.2E-40 332.3 16.1 254 709-1012 23-284 (318)
283 3o6n_A APL1; leucine-rich repe 100.0 2.6E-35 8.9E-40 338.6 18.5 131 502-638 251-381 (390)
284 3uqc_A Probable conserved tran 100.0 3.3E-35 1.1E-39 321.7 18.0 241 711-1027 31-274 (286)
285 2rio_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 341.4 18.3 256 712-1011 16-295 (434)
286 3p23_A Serine/threonine-protei 100.0 1.1E-34 3.7E-39 336.0 17.8 250 710-1011 23-283 (432)
287 3dzo_A Rhoptry kinase domain; 100.0 4.7E-35 1.6E-39 337.9 14.0 259 710-1018 77-372 (413)
288 2pzi_A Probable serine/threoni 100.0 1.5E-34 5.1E-39 355.5 18.4 247 710-1018 79-328 (681)
289 3m2w_A MAP kinase-activated pr 100.0 6.2E-34 2.1E-38 314.4 17.7 237 710-1012 16-257 (299)
290 4fmz_A Internalin; leucine ric 100.0 6E-33 2.1E-37 313.7 24.2 305 105-487 41-346 (347)
291 3oja_B Anopheles plasmodium-re 100.0 6.7E-33 2.3E-37 336.2 23.2 307 85-488 52-359 (597)
292 2ft3_A Biglycan; proteoglycan, 100.0 2.2E-32 7.4E-37 306.8 23.4 267 108-485 54-331 (332)
293 4fmz_A Internalin; leucine ric 100.0 2.1E-32 7.2E-37 309.2 22.8 306 176-608 40-346 (347)
294 2vuw_A Serine/threonine-protei 100.0 5.6E-34 1.9E-38 320.4 9.2 196 710-929 19-278 (336)
295 1xku_A Decorin; proteoglycan, 100.0 6.1E-32 2.1E-36 303.0 23.4 178 108-314 52-229 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-31 6.4E-36 299.2 22.5 236 71-315 33-278 (332)
297 1xku_A Decorin; proteoglycan, 100.0 6.9E-31 2.4E-35 294.4 24.6 294 131-534 30-330 (330)
298 2z80_A TOLL-like receptor 2, v 100.0 2E-31 7E-36 301.7 15.5 291 63-444 22-318 (353)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.7E-35 5.8E-40 348.5 -18.8 395 108-591 3-447 (461)
300 1z7x_W Ribonuclease inhibitor; 100.0 2.7E-34 9.1E-39 338.3 -11.9 358 205-609 4-412 (461)
301 3g06_A SSPH2 (leucine-rich rep 100.0 2.5E-29 8.6E-34 301.5 18.6 296 56-450 7-307 (622)
302 2z66_A Variable lymphocyte rec 100.0 2.4E-29 8.1E-34 278.7 16.0 246 70-317 6-264 (306)
303 1wwl_A Monocyte differentiatio 100.0 6.2E-31 2.1E-35 291.9 1.8 269 60-338 20-310 (312)
304 1wwl_A Monocyte differentiatio 100.0 8.6E-31 2.9E-35 290.8 2.2 206 104-314 39-266 (312)
305 3ogk_B Coronatine-insensitive 100.0 1.2E-32 4.3E-37 334.9 -14.2 456 69-606 40-549 (592)
306 2z66_A Variable lymphocyte rec 100.0 6.3E-29 2.2E-33 275.3 16.4 258 379-638 28-294 (306)
307 2z80_A TOLL-like receptor 2, v 100.0 6.6E-29 2.2E-33 281.0 15.3 277 108-491 31-318 (353)
308 4fcg_A Uncharacterized protein 100.0 1.2E-28 4.2E-33 275.0 16.5 225 379-609 81-315 (328)
309 3ogk_B Coronatine-insensitive 100.0 2.2E-31 7.4E-36 323.9 -7.3 414 120-610 61-528 (592)
310 3zyi_A Leucine-rich repeat-con 100.0 7.3E-28 2.5E-32 282.0 21.0 247 111-440 57-303 (452)
311 1ozn_A Reticulon 4 receptor; N 100.0 3.2E-28 1.1E-32 266.6 15.6 235 403-638 32-268 (285)
312 3zyj_A Leucine-rich repeat-con 99.9 8.4E-28 2.9E-32 280.4 17.2 233 379-614 64-298 (440)
313 3zyj_A Leucine-rich repeat-con 99.9 2.5E-27 8.5E-32 276.4 20.7 235 99-440 57-292 (440)
314 3zyi_A Leucine-rich repeat-con 99.9 1.3E-27 4.5E-32 279.8 18.3 248 73-339 56-305 (452)
315 3o53_A Protein LRIM1, AGAP0063 99.9 5.3E-29 1.8E-33 277.0 5.7 265 112-468 14-281 (317)
316 1ozn_A Reticulon 4 receptor; N 99.9 2.9E-27 9.8E-32 259.0 18.1 244 87-334 14-258 (285)
317 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-26 4.5E-31 278.0 23.7 264 108-494 40-304 (622)
318 2o6q_A Variable lymphocyte rec 99.9 1.1E-26 3.9E-31 251.9 18.3 219 68-316 2-220 (270)
319 3o53_A Protein LRIM1, AGAP0063 99.9 2.6E-28 9E-33 271.4 5.4 269 253-614 11-282 (317)
320 4azs_A Methyltransferase WBDD; 99.9 5.4E-28 1.8E-32 288.3 6.7 186 718-927 241-437 (569)
321 3oja_A Leucine-rich immune mol 99.9 1.7E-27 5.8E-32 280.3 7.5 77 380-458 192-270 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 9.5E-26 3.3E-30 245.7 18.2 217 100-320 22-243 (276)
323 2p1m_B Transport inhibitor res 99.9 1.4E-29 4.7E-34 308.2 -15.3 187 69-262 33-245 (594)
324 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.8E-31 273.4 7.9 216 379-608 34-250 (487)
325 2z62_A TOLL-like receptor 4, v 99.9 3.3E-25 1.1E-29 241.4 15.5 210 379-614 28-243 (276)
326 3m19_A Variable lymphocyte rec 99.9 1E-24 3.6E-29 233.7 16.3 192 69-267 3-194 (251)
327 2o6q_A Variable lymphocyte rec 99.9 4.6E-24 1.6E-28 231.3 20.9 203 110-340 18-221 (270)
328 2p1m_B Transport inhibitor res 99.9 1.8E-28 6E-33 298.4 -17.8 420 112-608 47-519 (594)
329 1p9a_G Platelet glycoprotein I 99.9 3.1E-24 1.1E-28 234.7 17.1 204 104-315 6-209 (290)
330 3rfs_A Internalin B, repeat mo 99.9 3.9E-24 1.3E-28 232.1 16.6 205 85-301 42-246 (272)
331 1p9a_G Platelet glycoprotein I 99.9 5.2E-24 1.8E-28 233.0 15.4 203 378-611 9-211 (290)
332 3en9_A Glycoprotease, O-sialog 99.9 2E-24 6.9E-29 256.1 11.7 189 710-928 335-538 (540)
333 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.6E-28 223.3 16.3 197 108-311 31-236 (239)
334 3rfs_A Internalin B, repeat mo 99.9 1.6E-23 5.6E-28 227.2 17.1 205 103-319 36-240 (272)
335 4glp_A Monocyte differentiatio 99.9 6.7E-24 2.3E-28 235.1 12.6 226 108-338 64-308 (310)
336 4glp_A Monocyte differentiatio 99.9 7.6E-24 2.6E-28 234.6 12.3 224 85-315 65-308 (310)
337 3goz_A Leucine-rich repeat-con 99.9 1.6E-25 5.6E-30 253.8 -2.6 177 89-265 3-209 (362)
338 3goz_A Leucine-rich repeat-con 99.9 1.8E-25 6E-30 253.6 -2.7 263 112-447 2-304 (362)
339 4ay9_X Follicle-stimulating ho 99.9 6.4E-23 2.2E-27 231.2 17.7 244 71-334 9-256 (350)
340 2xwt_C Thyrotropin receptor; s 99.9 1.5E-23 5.1E-28 222.9 11.8 203 123-334 25-236 (239)
341 3cvr_A Invasion plasmid antige 99.9 6.6E-24 2.3E-28 251.3 8.7 208 61-300 33-253 (571)
342 2ast_B S-phase kinase-associat 99.9 1.7E-25 5.9E-30 251.2 -7.8 212 69-312 35-258 (336)
343 2o6s_A Variable lymphocyte rec 99.9 3.3E-22 1.1E-26 207.6 16.5 186 69-302 5-190 (208)
344 3m19_A Variable lymphocyte rec 99.9 5.7E-22 1.9E-26 212.3 17.9 180 109-316 15-194 (251)
345 1h6u_A Internalin H; cell adhe 99.9 2.2E-22 7.4E-27 222.4 14.7 198 104-318 37-234 (308)
346 1zar_A RIO2 kinase; serine kin 99.9 2E-22 6.9E-27 218.8 12.4 164 704-913 83-274 (282)
347 2ca6_A RAN GTPase-activating p 99.9 3.7E-24 1.3E-28 245.1 -3.7 252 349-612 27-320 (386)
348 1h6u_A Internalin H; cell adhe 99.9 5.7E-22 1.9E-26 219.0 13.9 211 112-340 23-233 (308)
349 2ca6_A RAN GTPase-activating p 99.9 2.3E-24 8E-29 246.8 -5.9 205 379-604 94-339 (386)
350 4ay9_X Follicle-stimulating ho 99.9 1E-21 3.6E-26 221.3 14.4 121 136-259 13-135 (350)
351 4b8c_D Glucose-repressible alc 99.9 6.6E-23 2.3E-27 252.1 2.4 261 38-314 129-404 (727)
352 2ast_B S-phase kinase-associat 99.9 1.4E-22 4.9E-27 227.4 4.1 235 180-472 70-315 (336)
353 3cvr_A Invasion plasmid antige 99.8 1.9E-21 6.4E-26 230.3 13.6 189 380-596 60-255 (571)
354 3e6j_A Variable lymphocyte rec 99.8 6.7E-21 2.3E-25 200.7 15.7 166 61-243 9-174 (229)
355 2o6s_A Variable lymphocyte rec 99.8 4.4E-20 1.5E-24 191.5 14.9 180 382-596 10-190 (208)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 8E-21 2.7E-25 198.6 8.9 183 452-638 13-196 (220)
357 2v9t_B SLIT homolog 2 protein 99.8 7.3E-20 2.5E-24 191.3 14.1 155 71-241 11-165 (220)
358 1dce_A Protein (RAB geranylger 99.8 2E-22 6.8E-27 240.2 -7.6 202 105-330 346-566 (567)
359 2v9t_B SLIT homolog 2 protein 99.8 1.8E-19 6.3E-24 188.3 14.2 153 111-266 14-166 (220)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 1.5E-19 5E-24 189.0 13.2 152 89-243 16-168 (220)
361 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.5E-24 198.2 12.2 173 129-316 43-215 (291)
362 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.8E-24 198.8 11.2 173 105-292 43-215 (291)
363 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.7E-24 217.8 12.1 192 109-317 22-213 (605)
364 2xot_A Amphoterin-induced prot 99.8 1.9E-19 6.5E-24 203.6 12.4 149 90-241 24-176 (361)
365 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.1E-24 204.5 11.4 180 111-315 21-203 (361)
366 3e6j_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 183.9 16.2 154 111-268 22-175 (229)
367 1m9s_A Internalin B; cell inva 99.8 5.6E-19 1.9E-23 211.6 14.3 185 104-303 39-223 (605)
368 1w8a_A SLIT protein; signaling 99.8 3.2E-19 1.1E-23 182.2 8.6 158 477-638 11-169 (192)
369 1dce_A Protein (RAB geranylger 99.8 3E-21 1E-25 230.0 -7.7 191 400-614 346-552 (567)
370 1zth_A RIO1 serine protein kin 99.8 1.9E-18 6.5E-23 185.3 11.1 138 712-876 48-219 (258)
371 1xeu_A Internalin C; cellular 99.8 9.6E-19 3.3E-23 188.2 8.9 169 107-291 18-186 (263)
372 1xeu_A Internalin C; cellular 99.7 2E-18 6.8E-23 185.7 10.8 167 86-267 21-187 (263)
373 4ezg_A Putative uncharacterize 99.7 3.2E-18 1.1E-22 175.7 11.5 131 129-265 41-172 (197)
374 4b8c_D Glucose-repressible alc 99.7 4.6E-19 1.6E-23 218.0 5.9 179 380-565 174-359 (727)
375 4ezg_A Putative uncharacterize 99.7 2.3E-18 8E-23 176.7 10.1 153 105-265 41-194 (197)
376 1w8a_A SLIT protein; signaling 99.7 8.3E-18 2.8E-22 171.6 12.6 130 111-243 11-141 (192)
377 2wfh_A SLIT homolog 2 protein 99.7 1.8E-17 6.2E-22 169.1 8.0 159 477-640 13-171 (193)
378 2ell_A Acidic leucine-rich nuc 99.7 4.1E-17 1.4E-21 162.8 10.1 134 106-241 22-160 (168)
379 3sb4_A Hypothetical leucine ri 99.7 1.9E-17 6.6E-22 184.7 6.0 299 97-481 12-328 (329)
380 2o6r_A Variable lymphocyte rec 99.7 3E-16 1E-20 158.0 13.1 135 70-220 6-140 (177)
381 2wfh_A SLIT homolog 2 protein 99.7 2.6E-16 8.8E-21 160.5 12.6 107 109-216 32-138 (193)
382 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.6E-21 159.8 8.8 132 132-265 24-160 (168)
383 3sb4_A Hypothetical leucine ri 99.7 7.5E-17 2.6E-21 179.9 8.3 288 130-504 23-326 (329)
384 2je0_A Acidic leucine-rich nuc 99.6 6.4E-17 2.2E-21 157.8 5.5 128 107-236 16-148 (149)
385 2o6r_A Variable lymphocyte rec 99.6 8.2E-16 2.8E-20 154.7 13.1 130 111-243 10-139 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 1.4E-16 4.7E-21 155.4 5.9 128 131-260 16-148 (149)
387 4gyi_A RIO2 kinase; protein ki 99.6 4.8E-16 1.6E-20 172.3 8.7 143 706-877 90-266 (397)
388 1ds9_A Outer arm dynein; leuci 99.6 1.1E-17 3.7E-22 171.9 -8.7 135 106-245 16-157 (198)
389 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-15 9.2E-20 150.7 6.8 132 104-241 15-153 (176)
390 1a9n_A U2A', U2A'; complex (nu 99.5 2.8E-15 9.6E-20 150.6 6.2 133 127-265 14-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.5 1.8E-16 6.3E-21 162.7 -4.5 133 469-609 43-186 (198)
392 4fdw_A Leucine rich hypothetic 99.5 1.5E-13 5.2E-18 156.4 18.9 89 396-486 293-382 (401)
393 4fdw_A Leucine rich hypothetic 99.5 1.7E-13 5.7E-18 156.0 17.7 149 157-314 136-284 (401)
394 3g39_A Variable lymphocyte rec 99.5 9.6E-14 3.3E-18 138.2 11.9 104 112-218 13-116 (170)
395 2r9u_A Variable lymphocyte rec 99.5 7.4E-14 2.5E-18 139.6 11.0 104 111-217 15-118 (174)
396 3g39_A Variable lymphocyte rec 99.5 9.3E-14 3.2E-18 138.4 11.5 108 133-243 10-117 (170)
397 2r9u_A Variable lymphocyte rec 99.5 1.6E-13 5.5E-18 137.1 11.2 106 134-242 14-119 (174)
398 4fs7_A Uncharacterized protein 99.4 6.4E-12 2.2E-16 143.5 19.0 309 102-458 65-374 (394)
399 4fs7_A Uncharacterized protein 99.4 6.7E-12 2.3E-16 143.4 19.2 149 394-576 244-393 (394)
400 2ifg_A High affinity nerve gro 99.3 3E-12 1E-16 143.7 9.6 107 71-192 8-115 (347)
401 2ifg_A High affinity nerve gro 99.3 5.3E-12 1.8E-16 141.7 9.2 103 136-241 12-116 (347)
402 3tm0_A Aminoglycoside 3'-phosp 99.3 1.2E-11 4.1E-16 132.9 11.3 148 705-874 8-212 (263)
403 3un9_A NLR family member X1; l 99.2 3.5E-13 1.2E-17 151.9 -4.5 73 520-592 180-260 (372)
404 3un9_A NLR family member X1; l 99.2 2.7E-13 9.3E-18 152.7 -7.4 160 426-610 71-254 (372)
405 4gt6_A Cell surface protein; l 99.1 1.2E-09 4.1E-14 124.6 18.2 109 126-237 57-169 (394)
406 4gt6_A Cell surface protein; l 99.1 3.1E-09 1.1E-13 121.2 19.7 157 102-264 57-217 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 2.6E-10 9E-15 122.1 9.1 141 708-875 17-214 (264)
408 3rw6_A Nuclear RNA export fact 98.9 3.5E-12 1.2E-16 134.7 -11.9 179 36-221 30-237 (267)
409 2ra8_A Uncharacterized protein 98.9 1.3E-10 4.4E-15 129.7 -0.2 156 83-241 106-292 (362)
410 3sg8_A APH(2'')-ID; antibiotic 98.9 9.7E-10 3.3E-14 120.6 5.8 190 716-928 25-287 (304)
411 3dxp_A Putative acyl-COA dehyd 98.9 6.2E-09 2.1E-13 117.1 12.0 145 715-875 42-248 (359)
412 2ra8_A Uncharacterized protein 98.7 7.9E-10 2.7E-14 123.3 -0.8 205 107-335 106-341 (362)
413 4h09_A Hypothetical leucine ri 98.6 5.5E-07 1.9E-11 101.9 17.9 76 517-594 280-355 (379)
414 4h09_A Hypothetical leucine ri 98.6 1.1E-06 3.9E-11 99.3 19.8 196 105-311 43-250 (379)
415 3rw6_A Nuclear RNA export fact 98.5 1.4E-08 4.7E-13 107.2 -0.1 79 521-601 168-257 (267)
416 3r70_A Aminoglycoside phosphot 98.5 7.8E-07 2.7E-11 98.0 13.3 136 712-875 38-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 9.2E-09 3.1E-13 103.5 -5.4 70 100-169 28-106 (185)
418 4gkh_A Aminoglycoside 3'-phosp 98.4 1.8E-06 6.3E-11 92.5 12.4 145 708-875 22-223 (272)
419 3d1u_A Putative fructosamine-3 98.3 2.2E-06 7.4E-11 92.5 12.5 76 715-800 19-97 (288)
420 3tdw_A Gentamicin resistance p 98.3 3.1E-06 1.1E-10 92.4 13.1 137 716-875 24-224 (306)
421 1io0_A Tropomodulin; LRR prote 98.2 5E-08 1.7E-12 98.0 -3.8 94 124-217 28-136 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.5E-05 5.1E-10 89.1 13.3 152 714-876 44-244 (362)
423 3ats_A Putative uncharacterize 98.0 1.1E-05 3.9E-10 90.2 10.6 85 716-802 25-122 (357)
424 2olc_A MTR kinase, methylthior 97.9 2.7E-05 9.3E-10 88.5 10.6 76 716-798 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.8 8.8E-05 3E-09 82.3 12.3 152 717-874 38-251 (346)
426 3f7w_A Putative fructosamine-3 97.6 0.00018 6.2E-09 77.6 11.1 77 713-799 17-96 (288)
427 3jr1_A Putative fructosamine-3 97.6 0.00027 9.1E-09 76.7 11.6 145 716-871 41-232 (312)
428 2ppq_A HSK, HK, homoserine kin 97.4 0.00069 2.4E-08 74.2 12.3 172 699-874 5-216 (322)
429 3e4g_A ATP synthase subunit S, 97.4 4.7E-05 1.6E-09 74.3 2.3 84 523-606 61-150 (176)
430 3e4g_A ATP synthase subunit S, 97.4 1.9E-05 6.4E-10 77.1 -0.8 82 133-214 62-149 (176)
431 2pyw_A Uncharacterized protein 97.3 0.00066 2.3E-08 77.5 10.7 80 844-925 231-313 (420)
432 3dxq_A Choline/ethanolamine ki 97.2 0.0013 4.3E-08 71.4 11.3 75 713-801 20-96 (301)
433 2qg7_A Ethanolamine kinase PV0 97.1 0.0028 9.6E-08 72.6 12.4 76 716-801 113-189 (458)
434 3feg_A Choline/ethanolamine ki 97.0 0.0012 4E-08 73.7 8.6 148 716-875 55-254 (379)
435 1zyl_A Hypothetical protein YI 97.0 0.0053 1.8E-07 67.3 13.6 171 698-875 8-223 (328)
436 1nw1_A Choline kinase (49.2 KD 96.9 0.0019 6.4E-08 73.7 9.8 74 716-800 78-159 (429)
437 3rfe_A Platelet glycoprotein I 96.9 0.00058 2E-08 63.5 4.5 58 551-610 12-70 (130)
438 3csv_A Aminoglycoside phosphot 96.9 0.0023 7.7E-08 70.5 10.0 32 844-875 182-217 (333)
439 3i1a_A Spectinomycin phosphotr 96.6 0.008 2.7E-07 66.2 11.5 31 845-875 206-236 (339)
440 3c5i_A Choline kinase; choline 96.5 0.0059 2E-07 68.2 9.9 75 716-800 38-121 (369)
441 3rfe_A Platelet glycoprotein I 96.5 0.0033 1.1E-07 58.3 6.0 35 206-240 33-67 (130)
442 2yle_A Protein spire homolog 1 96.4 0.0074 2.5E-07 60.1 8.5 103 798-927 33-135 (229)
443 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00064 2.2E-08 67.6 0.6 109 379-487 41-170 (197)
444 3f2s_A CK, chetk-alpha, cholin 96.1 0.02 6.9E-07 63.9 11.1 148 716-874 57-279 (401)
445 1pgv_A TMD-1, tropomodulin TMD 96.1 0.00031 1E-08 69.9 -3.4 67 103-169 36-111 (197)
446 3mes_A Choline kinase; malaria 95.5 0.036 1.2E-06 62.5 9.9 75 716-800 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 93.6 0.32 1.1E-05 54.6 11.7 30 846-875 245-280 (401)
448 2l2t_A Receptor tyrosine-prote 91.8 0.12 4.3E-06 36.6 3.1 32 657-688 10-41 (44)
449 2ks1_B Epidermal growth factor 91.3 0.11 3.9E-06 36.9 2.5 31 657-687 11-41 (44)
450 2jwa_A Receptor tyrosine-prote 81.7 1 3.5E-05 31.9 2.8 24 662-685 16-39 (44)
451 4ann_A ESSB; membrane protein, 80.5 2.7 9.1E-05 41.9 6.5 89 817-934 75-163 (215)
452 3cxl_A N-chimerin; SH2, RHO-GA 73.8 0.38 1.3E-05 54.9 -2.0 61 714-777 145-213 (463)
453 4ano_A ESSB; membrane protein, 71.1 7.3 0.00025 38.8 6.8 83 818-929 80-163 (219)
454 2k9y_A Ephrin type-A receptor 55.1 9.5 0.00033 26.6 3.0 13 659-671 15-27 (41)
455 2k1k_A Ephrin type-A receptor 53.9 9.8 0.00033 26.1 2.8 7 662-668 15-21 (38)
456 1iij_A ERBB-2 receptor protein 47.3 7.8 0.00027 25.9 1.4 6 679-684 29-34 (35)
457 2l8s_A Integrin alpha-1; trans 46.3 20 0.00069 26.6 3.6 22 659-680 12-33 (54)
458 2knc_A Integrin alpha-IIB; tra 44.7 26 0.00089 26.1 4.0 22 659-680 15-36 (54)
459 1cja_A Protein (actin-fragmin 43.2 1.4E+02 0.0047 31.7 10.9 145 714-875 72-237 (342)
460 2l9u_A Receptor tyrosine-prote 42.6 15 0.00053 23.9 2.1 29 657-685 6-34 (40)
461 2k1a_A Integrin alpha-IIB; sin 30.4 45 0.0016 23.4 3.2 22 659-680 13-34 (42)
462 2lz0_A Uncharacterized protein 25.3 67 0.0023 27.3 4.2 48 389-437 6-53 (100)
463 2lz0_A Uncharacterized protein 24.3 76 0.0026 27.0 4.4 45 192-237 8-52 (100)
464 3ox7_P MH027; urokinase-type p 23.5 17 0.00058 20.6 0.0 9 69-77 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.4e-84 Score=809.52 Aligned_cols=595 Identities=31% Similarity=0.471 Sum_probs=458.0
Q ss_pred ccccCCChhhHHHHHHHHHhcccCCCCCCCCCCCCCCCcceeeeEecCCCCCeEEEEEcCCCCCCcc---cc--------
Q 042075 33 ASTVAGNETDRLALLEFKSKITHDPLGVFGSWNESIHFCQWHGVTCSRRQHQRVTILDLKSLKLAGY---IS-------- 101 (1033)
Q Consensus 33 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~W~~~~~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~---~~-------- 101 (1033)
++++++.++|++||++||+++. ||. .+++|+.++|||+|.||+|+ .+||+.|||++++++|. ++
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 3455567899999999999996 887 89999988899999999998 36999999999999987 54
Q ss_pred ---------------cccCCCCCCCEEEecCCCccccCCc--cccccccccEEecccCCCCCCCCccc-cCCCCCcEEEc
Q 042075 102 ---------------AHVGNLSFLKVLDLHNNSFHHEIPS--EFDRLRRLQVLALHNNSIGGEIPANI-SSCSNLIRVRL 163 (1033)
Q Consensus 102 ---------------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~L 163 (1033)
+.++++++|++|||++|.++|.+|. .|+++++|++|+|++|.+++.+|..+ .++++|++|+|
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 4677888999999999999988888 89999999999999999988888766 67777777777
Q ss_pred ccccccCCCCCC---c----------------------ccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCC
Q 042075 164 SSNELVGKIPSE---L----------------------GSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDG 218 (1033)
Q Consensus 164 s~N~l~~~~p~~---~----------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 218 (1033)
++|++++..|.. + ..+++|++|+|++|++++.+|. ++++++|++|+|++|++++
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~ 237 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCS
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCC
Confidence 777777655544 3 3455555566666666655555 6666666666666666666
Q ss_pred cCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCc
Q 042075 219 SIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAIS 298 (1033)
Q Consensus 219 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 298 (1033)
.+|..|+.+++|++|+|++|++++.+|.. .+++|++|++++|.+++.+|..++..+++|++|+|++|++++.+|..+.
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~ 315 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 315 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGG
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHh
Confidence 66666666666666666666666655554 5666666666677776677777665568888888888888888888888
Q ss_pred CCCCccccccccccccCcCcc--hhhhccccceeeecCcCCCCCCccchhhc-c------------------ccc--ccC
Q 042075 299 NASNLEVFQVNSNKLTGEVPY--LEKLQRLSHFVITRNSLGSGEHRDLNFLC-S------------------LTN--ATR 355 (1033)
Q Consensus 299 ~l~~L~~L~Ls~N~l~~~~~~--l~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~------------------l~~--~~~ 355 (1033)
++++|++|++++|++++.+|. +.++++|++|++++|.+.......+..+. . +.. +++
T Consensus 316 ~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 395 (768)
T 3rgz_A 316 SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395 (768)
T ss_dssp GCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCC
T ss_pred cCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCC
Confidence 888888888888888866553 77788888888888877532222221111 0 111 445
Q ss_pred cceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEcc
Q 042075 356 LKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQ 435 (1033)
Q Consensus 356 L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 435 (1033)
|+.++++.|.+.+.+|..+.++ ++|+.|++++|++++.+|..|+++++|++|++++|++++.+|..+..+++|++|+|+
T Consensus 396 L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 474 (768)
T 3rgz_A 396 LQELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474 (768)
T ss_dssp CCEEECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred ccEEECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEec
Confidence 6666666666666666666554 567777777777776777777777777777777777777777777777777777777
Q ss_pred ccccccccCcccccce-eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCC
Q 042075 436 ENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGP 514 (1033)
Q Consensus 436 ~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~ 514 (1033)
+|++++.+|..+..++ |++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|..+..+.++ +.|++++|.++|.
T Consensus 475 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL-IWLDLNTNLFNGT 553 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTC-CEEECCSSEEESB
T ss_pred CCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCC-CEEECCCCccCCc
Confidence 7777777777777665 7777777777777777777777777777777777776777766666666 6677777776665
Q ss_pred cCC----------------------------------------------------------------------ccccccc
Q 042075 515 IPN----------------------------------------------------------------------EVGNLKN 524 (1033)
Q Consensus 515 ~p~----------------------------------------------------------------------~~~~l~~ 524 (1033)
+|. .++.+++
T Consensus 554 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~ 633 (768)
T 3rgz_A 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633 (768)
T ss_dssp CCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBC
T ss_pred CChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccc
Confidence 554 4455678
Q ss_pred cceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCC
Q 042075 525 LEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSN 604 (1033)
Q Consensus 525 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 604 (1033)
|+.|||++|+++|.+|.+|+++++|+.|+|++|+++|.+|..++++++|+.||||+|+++|.+|..+..+++|++|||++
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCCcccccccccccccccccccCCccc
Q 042075 605 NDFEGMVPTEGVFRNASITSVLGNLKLCGGTHE 637 (1033)
Q Consensus 605 N~l~g~~p~~~~~~~~~~~~~~~n~~lcg~~~~ 637 (1033)
|+|+|.||..++|.++...+|.||+++||.|+.
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~ 746 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 746 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCCCCc
Confidence 999999999999999999999999999999875
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.1e-65 Score=635.58 Aligned_cols=515 Identities=30% Similarity=0.487 Sum_probs=401.8
Q ss_pred eEEEEEcCCCCCCccccccc-CCCCCCCEEEecCCCccccCCcc---cc----------------------ccccccEEe
Q 042075 85 RVTILDLKSLKLAGYISAHV-GNLSFLKVLDLHNNSFHHEIPSE---FD----------------------RLRRLQVLA 138 (1033)
Q Consensus 85 ~v~~l~l~~~~l~g~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~---~~----------------------~l~~L~~L~ 138 (1033)
+.+.|+|+++.+++.++..+ +++++|++|+|++|++++..|.. +. .+++|++|+
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~ 206 (768)
T 3rgz_A 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 206 (768)
T ss_dssp TCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEE
T ss_pred CCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEE
Confidence 46677777777777666654 66677777777777766655544 34 455555555
Q ss_pred cccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCC
Q 042075 139 LHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDG 218 (1033)
Q Consensus 139 Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 218 (1033)
|++|.+++.+|. ++++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|.. .+++|++|+|++|++++
T Consensus 207 Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~ 283 (768)
T 3rgz_A 207 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG 283 (768)
T ss_dssp CCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEE
T ss_pred CcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCC
Confidence 555555555554 666666666666666666666666666666666666666666555543 55666666666666666
Q ss_pred cCCcccccc-CCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccC
Q 042075 219 SIPDTFGWL-KNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAI 297 (1033)
Q Consensus 219 ~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 297 (1033)
.+|..+..+ ++|++|+|++|++++.+|..+.++++|++|++++|.+++.+|...+..+++|++|+|++|++++.+|..+
T Consensus 284 ~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l 363 (768)
T 3rgz_A 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363 (768)
T ss_dssp SCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTH
T ss_pred ccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHH
Confidence 666666554 6677777777777766677777777777777777777666666655566777777777777776677766
Q ss_pred cCCC-CccccccccccccCcCc-chhh--hccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccc
Q 042075 298 SNAS-NLEVFQVNSNKLTGEVP-YLEK--LQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPAC 373 (1033)
Q Consensus 298 ~~l~-~L~~L~Ls~N~l~~~~~-~l~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~ 373 (1033)
..++ +|++|++++|++++..| .+.. +++|++|++++|.+.... ...+.++++|+.|+++.|.+.+.+|..
T Consensus 364 ~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 437 (768)
T 3rgz_A 364 TNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI------PPTLSNCSELVSLHLSFNYLSGTIPSS 437 (768)
T ss_dssp HHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC------CGGGGGCTTCCEEECCSSEEESCCCGG
T ss_pred HhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc------CHHHhcCCCCCEEECcCCcccCcccHH
Confidence 6665 67777777777766443 3333 566777777777665321 234678899999999999999999999
Q ss_pred cccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-e
Q 042075 374 ISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-L 452 (1033)
Q Consensus 374 ~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L 452 (1033)
+..+ ++|+.|++++|.+++.+|..+..+++|++|++++|++++.+|.++..+++|++|+|++|++++.+|.+++.++ |
T Consensus 438 l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 516 (768)
T 3rgz_A 438 LGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516 (768)
T ss_dssp GGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred HhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCC
Confidence 8876 6999999999999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred ceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCch----------------------------------
Q 042075 453 FNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLS---------------------------------- 498 (1033)
Q Consensus 453 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~---------------------------------- 498 (1033)
++|+|++|+++|.+|..++.+++|++|++++|+++|.+|..++...
T Consensus 517 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (768)
T 3rgz_A 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596 (768)
T ss_dssp CEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEEC
T ss_pred CEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999998765421
Q ss_pred -----------------------------------hHHhhhhccCccccCCcCCccccccccceEEccccccccccCccc
Q 042075 499 -----------------------------------SLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTL 543 (1033)
Q Consensus 499 -----------------------------------~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 543 (1033)
..++.|||++|+++|.+|.+++.+++|+.|+|++|+++|.+|.+|
T Consensus 597 ~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l 676 (768)
T 3rgz_A 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEV 676 (768)
T ss_dssp TTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred ccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHH
Confidence 123789999999999999999999999999999999999999999
Q ss_pred ccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCc-Cccc
Q 042075 544 GSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNND-FEGM 610 (1033)
Q Consensus 544 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~ 610 (1033)
+++++|+.|||++|+++|.+|..++++++|++||||+|+|+|.||.. ..+..+....+.+|+ |.|.
T Consensus 677 ~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 677 GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred hCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 99999999999999999999999999999999999999999999975 345556666777886 6663
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.5e-59 Score=576.70 Aligned_cols=562 Identities=21% Similarity=0.222 Sum_probs=469.2
Q ss_pred cceeeeEecCCC--------CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccC
Q 042075 71 CQWHGVTCSRRQ--------HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNN 142 (1033)
Q Consensus 71 c~w~gv~C~~~~--------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 142 (1033)
|.++.|.|.... ..+++.|+|+++++++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 456667776421 347899999999999887788999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCc
Q 042075 143 SIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPD 222 (1033)
Q Consensus 143 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 222 (1033)
.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99965556799999999999999999977778999999999999999999999999999999999999999999988887
Q ss_pred ccc--ccCCCCcccccccccCCCCcccccCCC---------------------------ceeEEeccCccccCccCcccc
Q 042075 223 TFG--WLKNLVNLTMAQNRLSGTIPSSIFNIS---------------------------SITVFDAGINQIQGVIPLDIG 273 (1033)
Q Consensus 223 ~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~---------------------------~L~~L~ls~N~l~~~~p~~~~ 273 (1033)
.|. .+++|++|++++|++++..|..+..+. +|+.|++++|.+++..|..+.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 765 458999999999999988888776654 466777777777766665443
Q ss_pred cccc--ccceeeecccccCCCCCccCcCCCCccccccccccccCcCc-chhhhccccceeeecCcCCCC-CCccchhh--
Q 042075 274 FTLQ--NLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVP-YLEKLQRLSHFVITRNSLGSG-EHRDLNFL-- 347 (1033)
Q Consensus 274 ~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~l~~N~l~~~-~~~~~~~l-- 347 (1033)
.+. +|++|+|++|++++..|..+..+++|++|++++|++++.+| .+..+++|+.|++++|..... ....+..+
T Consensus 244 -~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 244 -GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp -GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred -ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 444 49999999999988888888889999999999999888766 578888899998887654321 00011111
Q ss_pred cccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCc--cCCccccCC--CCCCEEEcccCcccccCChhh
Q 042075 348 CSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFG--NIPAAFGKF--VKLLRLEMWNNRLSGTIPPAI 423 (1033)
Q Consensus 348 ~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~--~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~ 423 (1033)
..+..+++|+.++++.|.+.+..|..+..+ ++|+.|++++|.+.. ..+..|..+ ++|+.|++++|++++..|.+|
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 145678899999999999998777766655 789999999997543 333445444 589999999999999999999
Q ss_pred hcCCCCcEEEccccccccccC-cccccce-eceeeccccccCCCCCCccCCCCcccEEecCCCccC--CCCCccccCchh
Q 042075 424 GELQNLRELRLQENRFLGNIP-PSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLT--GTIPPQLLGLSS 499 (1033)
Q Consensus 424 ~~l~~L~~L~L~~N~l~~~~p-~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~~~~ 499 (1033)
..+++|+.|+|++|++++.+| ..+..++ |++|++++|.+.+..+..|..+++|+.|++++|+++ +.+|..+..+.+
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 999999999999999988776 6788887 999999999999889999999999999999999986 578888888888
Q ss_pred HHhhhhccCccccCCcCCccccccccceEEccccccccccC--------cccccccccceeecccccccCcccccccCcc
Q 042075 500 LLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIP--------RTLGSCIKLELLQMQGNFLQGPIPSSLSSLR 571 (1033)
Q Consensus 500 ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 571 (1033)
+ +.|++++|++++..|..|..+++|+.|+|++|++++..+ ..|.++++|++|+|++|+++...+..|..++
T Consensus 482 L-~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 482 L-TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp C-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred C-CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 7 999999999998878889999999999999999986422 2478899999999999999954445789999
Q ss_pred cCCccccccccccccCCcccccccccceeecCCCcCcccCCCcc--cccccccccccccccccCCc
Q 042075 572 GLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEG--VFRNASITSVLGNLKLCGGT 635 (1033)
Q Consensus 572 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~--~~~~~~~~~~~~n~~lcg~~ 635 (1033)
+|+.|||++|+|++..+..|..+++|+.|+|++|+|++.+|..- .+..+....+.+|+..|+..
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999997777778899999999999999998777532 46677777889999998765
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.9e-61 Score=586.45 Aligned_cols=504 Identities=20% Similarity=0.270 Sum_probs=355.5
Q ss_pred ccccCCChhhHHHHHHHHHhcccCCCCCC-------CCCCCCCCCcce---eeeEecCCCCCeEEEEEcCCCCCCccccc
Q 042075 33 ASTVAGNETDRLALLEFKSKITHDPLGVF-------GSWNESIHFCQW---HGVTCSRRQHQRVTILDLKSLKLAGYISA 102 (1033)
Q Consensus 33 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~-------~~W~~~~~~c~w---~gv~C~~~~~~~v~~l~l~~~~l~g~~~~ 102 (1033)
.+..+....|++||.+||+++.++.+... .+|+.+++||.| .||+|+.. +||+.|+|++++++|.+|+
T Consensus 22 ~~~~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~ 99 (636)
T 4eco_A 22 LSRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPD 99 (636)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT--CCEEEEECTTSCCEEEECG
T ss_pred chhhhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC--CCEEEEEecCcccCCcCCh
Confidence 34445556899999999999965555433 389988999999 99999865 6999999999999999999
Q ss_pred ccCCCCCCCEEEecCCCc------cc------cCCccccccccccEEecccCCCCCCCCccccC-CCCCcEEEccccccc
Q 042075 103 HVGNLSFLKVLDLHNNSF------HH------EIPSEFDRLRRLQVLALHNNSIGGEIPANISS-CSNLIRVRLSSNELV 169 (1033)
Q Consensus 103 ~~~~l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~ 169 (1033)
++++|++|++|+|++|.+ .| .+|... +.+|+ +++++|.+.+.+|..+.. +.++..+++....+.
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 999999999999999987 34 566555 67788 999999999888887763 233444444432222
Q ss_pred CCCCCCcccccccceeee--cccccCCCCCCCCCCCCCCcEEEcccCcCCCc-----------------CCcccc--ccC
Q 042075 170 GKIPSELGSLSKIEYFSV--SYNNLTGSIPPSFGNLSSISFLFLSRNNLDGS-----------------IPDTFG--WLK 228 (1033)
Q Consensus 170 ~~~p~~~~~l~~L~~L~L--s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~ 228 (1033)
. .....++.+.+ .+|+++| +|..|+++++|++|+|++|++++. +|+.++ +++
T Consensus 177 ~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~ 249 (636)
T 4eco_A 177 K------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLK 249 (636)
T ss_dssp C------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCT
T ss_pred c------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccC
Confidence 1 11112222222 2455665 555566666666666666666653 666666 666
Q ss_pred CCCcccccccccCCCCcccccCCCceeEEeccCcc-ccC-ccCccccc-----cccccceeeecccccCCCCCc--cCcC
Q 042075 229 NLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQ-IQG-VIPLDIGF-----TLQNLQFFSVGRNQLTGAIPP--AISN 299 (1033)
Q Consensus 229 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~-l~~-~~p~~~~~-----~l~~L~~L~L~~N~l~~~~p~--~~~~ 299 (1033)
+|++|+|++|++.+.+|..+.++++|++|++++|+ +++ .+|..++. .+++|++|+|++|+++ .+|. .+.+
T Consensus 250 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~ 328 (636)
T 4eco_A 250 DLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQK 328 (636)
T ss_dssp TCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTT
T ss_pred CCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhcc
Confidence 66666666666666666666666666666666665 665 56655442 2377777777777777 6777 7778
Q ss_pred CCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccC
Q 042075 300 ASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFST 379 (1033)
Q Consensus 300 l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~ 379 (1033)
+++|++|++++|+++|.+|.+..++
T Consensus 329 l~~L~~L~L~~N~l~g~ip~~~~l~------------------------------------------------------- 353 (636)
T 4eco_A 329 MKKLGMLECLYNQLEGKLPAFGSEI------------------------------------------------------- 353 (636)
T ss_dssp CTTCCEEECCSCCCEEECCCCEEEE-------------------------------------------------------
T ss_pred CCCCCEEeCcCCcCccchhhhCCCC-------------------------------------------------------
Confidence 8888888888887776554433333
Q ss_pred cccEEEccCCCCCccCCccccCCCC-CCEEEcccCcccccCChhhhcCC--CCcEEEccccccccccCcccc-------c
Q 042075 380 TLEVLLLDSNKIFGNIPAAFGKFVK-LLRLEMWNNRLSGTIPPAIGELQ--NLRELRLQENRFLGNIPPSIG-------N 449 (1033)
Q Consensus 380 ~L~~L~L~~N~i~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~ 449 (1033)
+|+.|++++|+++ .+|..+.++++ |++|++++|+++ .+|..+..++ +|+.|+|++|++++.+|..+. .
T Consensus 354 ~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~ 431 (636)
T 4eco_A 354 KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFK 431 (636)
T ss_dssp EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCC
T ss_pred CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccccccc
Confidence 3444444445444 45555666666 666666666666 5565555543 666667777766666666665 4
Q ss_pred ce-eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchh-------HHhhhhccCccccCCcCCccc-
Q 042075 450 LK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSS-------LLIVLELSRNQLTGPIPNEVG- 520 (1033)
Q Consensus 450 l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~-------ll~~L~ls~N~l~~~~p~~~~- 520 (1033)
+. |++|+|++|.+++..+..+..+++|++|+|++|+++ .+|..++.... .|+.|+|++|+|+ .+|..+.
T Consensus 432 ~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 509 (636)
T 4eco_A 432 GINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRA 509 (636)
T ss_dssp CCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGST
T ss_pred CCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhh
Confidence 44 777777777777433344556778888888888887 77776655431 3378888888888 6777776
Q ss_pred -cccccceEEccccccccccCcccccccccceeec------ccccccCcccccccCcccCCccccccccccccCCccccc
Q 042075 521 -NLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQM------QGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVG 593 (1033)
Q Consensus 521 -~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 593 (1033)
.+++|+.|+|++|++++ +|..++++++|++|+| ++|++.+.+|.+++.+++|+.|+|++|+| +.+|..+.
T Consensus 510 ~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~- 586 (636)
T 4eco_A 510 TTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT- 586 (636)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-
T ss_pred ccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-
Confidence 88888888888888886 8888888888888888 56888899999999999999999999999 68888876
Q ss_pred ccccceeecCCCcCcccCC
Q 042075 594 FQLLEYLNLSNNDFEGMVP 612 (1033)
Q Consensus 594 l~~L~~L~ls~N~l~g~~p 612 (1033)
++|+.|+|++|++...-+
T Consensus 587 -~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 587 -PNISVLDIKDNPNISIDL 604 (636)
T ss_dssp -TTCCEEECCSCTTCEEEC
T ss_pred -CcCCEEECcCCCCccccH
Confidence 799999999998875443
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.6e-58 Score=558.77 Aligned_cols=528 Identities=18% Similarity=0.180 Sum_probs=401.6
Q ss_pred eeeeEecCCC--------CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCC
Q 042075 73 WHGVTCSRRQ--------HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSI 144 (1033)
Q Consensus 73 w~gv~C~~~~--------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l 144 (1033)
+..|.|.... ...++.|||+++++++..+..|+++++|++|+|++|++++..|.+|+++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 4568887532 24678888888888887777888888888888888888888888888888888888888888
Q ss_pred CCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccc
Q 042075 145 GGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTF 224 (1033)
Q Consensus 145 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 224 (1033)
++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|++++..++.+..+++|++|+|++|++++..|..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 88888888888888888888888887667788888888888888888887544445558888888888888888778888
Q ss_pred cccCCCC--cccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccC-----CCCCccC
Q 042075 225 GWLKNLV--NLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLT-----GAIPPAI 297 (1033)
Q Consensus 225 ~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~-----~~~p~~~ 297 (1033)
+.+++|+ .|++++|++++..|..+ ...+|+.|++++|... +. .+..+.++....+..+.+. ...+..+
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~-~~~~L~~L~l~~~~~~---~~-~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAF-DSAVFQSLNFGGTQNL---LV-IFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTT-TTCEEEEEECTTCSCH---HH-HHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhcccceeEEecCCCccCccChhHh-hhccccccccCCchhH---HH-HhhhccccchhheechhhccccccccChhHh
Confidence 8888888 78888888887666554 4468888888877511 11 0111221111111111111 1111222
Q ss_pred cCCC--CccccccccccccCcCcc-hhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCcccc
Q 042075 298 SNAS--NLEVFQVNSNKLTGEVPY-LEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACI 374 (1033)
Q Consensus 298 ~~l~--~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~ 374 (1033)
..+. +|+.|++++|++++.++. +..+++|++|++++|.++..+. .+.++++|+.|+++.|.+.+..|..+
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~-------~l~~l~~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS-------GLVGLSTLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS-------SCCSCTTCCEEECTTCCCSBGGGGCG
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCCh-------hhcccccCCEEECccCCcCcCchhhh
Confidence 2222 455555555555554443 4555555555555555543321 23455566666666666666666555
Q ss_pred ccccCcccEEEccCCCCCccCCc-cccCCCCCCEEEcccCcccccC--ChhhhcCCCCcEEEccccccccccCcccccce
Q 042075 375 SNFSTTLEVLLLDSNKIFGNIPA-AFGKFVKLLRLEMWNNRLSGTI--PPAIGELQNLRELRLQENRFLGNIPPSIGNLK 451 (1033)
Q Consensus 375 ~~~~~~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 451 (1033)
..+ ++|+.|++++|.+.+.+|. .+.++++|++|++++|++++.. |..+..+++|++|++++|++.+..|..+..++
T Consensus 322 ~~l-~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 400 (606)
T 3t6q_A 322 SNF-PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400 (606)
T ss_dssp GGC-TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT
T ss_pred hcc-CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc
Confidence 554 6788888888888765554 4888888888888888888665 77788888888888888888888888888876
Q ss_pred -eceeeccccccCCCCCCc-cCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccC---CcCCccccccccc
Q 042075 452 -LFNLQLSYNFLQGSIPSS-LGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTG---PIPNEVGNLKNLE 526 (1033)
Q Consensus 452 -L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~---~~p~~~~~l~~L~ 526 (1033)
|++|++++|.+.+..|.. +..+++|++|++++|++++..|..+..+.++ +.|++++|++++ ..+..+..+++|+
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCcc
Confidence 888888888888776544 8888888899999888887777777777776 888899988876 2346789999999
Q ss_pred eEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCc
Q 042075 527 MLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNND 606 (1033)
Q Consensus 527 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 606 (1033)
.|++++|++++..|..|+++++|++|+|++|++++.+|..+.+++.| .|+|++|++++.+|..+..+++|++|++++|+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 99999999999889999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CcccCCCcc
Q 042075 607 FEGMVPTEG 615 (1033)
Q Consensus 607 l~g~~p~~~ 615 (1033)
+++..+...
T Consensus 559 ~~c~c~~~~ 567 (606)
T 3t6q_A 559 LDCTCSNIY 567 (606)
T ss_dssp EECSGGGHH
T ss_pred ccccCCcHH
Confidence 999887543
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-57 Score=553.22 Aligned_cols=534 Identities=21% Similarity=0.205 Sum_probs=439.4
Q ss_pred CCccee----eeEecCCC--------CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccE
Q 042075 69 HFCQWH----GVTCSRRQ--------HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQV 136 (1033)
Q Consensus 69 ~~c~w~----gv~C~~~~--------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 136 (1033)
++|.|. .|.|.... ..+++.|+|+++++++..+..|.++++|++|+|++|++++..|.+|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 456663 57776421 246778888888888777778888888888888888888777778888888888
Q ss_pred EecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCC-CCCCCCCCCCCCcEEEcccCc
Q 042075 137 LALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTG-SIPPSFGNLSSISFLFLSRNN 215 (1033)
Q Consensus 137 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 215 (1033)
|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|++++ .+|..|+++++|++|+|++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 8888888887778888888888888888888886666778888888888888888875 467788888888888888888
Q ss_pred CCCcCCccccccCCCC----cccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCC
Q 042075 216 LDGSIPDTFGWLKNLV----NLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTG 291 (1033)
Q Consensus 216 l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 291 (1033)
+++..|..|+.+++|+ +|++++|++++..+.. +...+|+.|++++|.+.+......+..+++|+.+++..+.+.+
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~-~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQA-FQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCccc-ccCceeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 8877777787777665 6888888888544444 4444788888888887654444455577778877776655542
Q ss_pred C------CCccCcCCC--Ccccccc-ccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeec
Q 042075 292 A------IPPAISNAS--NLEVFQV-NSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHIN 362 (1033)
Q Consensus 292 ~------~p~~~~~l~--~L~~L~L-s~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~ 362 (1033)
. .+..+..+. +++.+++ ..|.+++..|.+..+++|+.|++++|.+...+ .+..+++|+.++++
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~ 315 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSII 315 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEE
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhh--------hccccccCCEEEcc
Confidence 1 112222222 3555666 67888888888999999999999999987643 46778899999999
Q ss_pred ccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCccccc--CChhhhcCCCCcEEEccccccc
Q 042075 363 INNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGT--IPPAIGELQNLRELRLQENRFL 440 (1033)
Q Consensus 363 ~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~ 440 (1033)
.|.+ +.+|. + ..++|+.|++++|...+.. .+..+++|++|++++|++++. .|..+..+++|++|+|++|.++
T Consensus 316 ~n~l-~~lp~-~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 389 (606)
T 3vq2_A 316 RCQL-KQFPT-L--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI 389 (606)
T ss_dssp SCCC-SSCCC-C--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE
T ss_pred cccC-ccccc-C--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc
Confidence 9999 78884 3 4479999999999766544 778999999999999999976 4899999999999999999998
Q ss_pred cccCcccccce-eceeeccccccCCCCC-CccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccC-CcCC
Q 042075 441 GNIPPSIGNLK-LFNLQLSYNFLQGSIP-SSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTG-PIPN 517 (1033)
Q Consensus 441 ~~~p~~~~~l~-L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~-~~p~ 517 (1033)
+ +|..+..++ |++|++++|.+.+..| ..+..+++|++|++++|++++.+|..+..+.++ +.|++++|++++ .+|.
T Consensus 390 ~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~ 467 (606)
T 3vq2_A 390 I-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL-NTLKMAGNSFKDNTLSN 467 (606)
T ss_dssp E-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECS
T ss_pred c-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCC-CEEECCCCcCCCcchHH
Confidence 4 778888887 9999999999999888 789999999999999999998888888888887 999999999998 4799
Q ss_pred ccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCccccccc-c
Q 042075 518 EVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQ-L 596 (1033)
Q Consensus 518 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~ 596 (1033)
.++.+++|+.|+|++|++++..|..|+++++|++|+|++|++++.+|..+..+++|+.|||++|+|+ .+|..+..++ +
T Consensus 468 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~ 546 (606)
T 3vq2_A 468 VFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKS 546 (606)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTT
T ss_pred hhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 7888899997 5
Q ss_pred cceeecCCCcCcccCCCccccccc
Q 042075 597 LEYLNLSNNDFEGMVPTEGVFRNA 620 (1033)
Q Consensus 597 L~~L~ls~N~l~g~~p~~~~~~~~ 620 (1033)
|++|++++|++.+..+..+...+.
T Consensus 547 L~~l~l~~N~~~c~c~~~~~~~~l 570 (606)
T 3vq2_A 547 LAFFNLTNNSVACICEHQKFLQWV 570 (606)
T ss_dssp CCEEECCSCCCCCSSTTHHHHTTT
T ss_pred CcEEEccCCCcccCCccHHHHHHH
Confidence 999999999999988875444443
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.8e-58 Score=569.70 Aligned_cols=486 Identities=19% Similarity=0.212 Sum_probs=292.0
Q ss_pred cccccCCChhhHHHHHHHHHhcccCCCCCCCCCCCCC-----CC--cce------------eeeEecCCCCCeEEEEEcC
Q 042075 32 TASTVAGNETDRLALLEFKSKITHDPLGVFGSWNESI-----HF--CQW------------HGVTCSRRQHQRVTILDLK 92 (1033)
Q Consensus 32 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~W~~~~-----~~--c~w------------~gv~C~~~~~~~v~~l~l~ 92 (1033)
..+.+++..+|++||++||+++. +| +|+.+. +| |.| .||+|+. .+||+.|+|+
T Consensus 260 ~~~~~~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls 331 (876)
T 4ecn_A 260 QLKETAEYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN--NGRVTGLSLA 331 (876)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT--TSCEEEEECT
T ss_pred eccccccchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC--CCCEEEEECc
Confidence 34556677899999999999994 65 786543 55 999 9999986 4799999999
Q ss_pred CCCCCcccccccCCCCCCCEEEe-cCCCccccCCccccc-----------------------------------------
Q 042075 93 SLKLAGYISAHVGNLSFLKVLDL-HNNSFHHEIPSEFDR----------------------------------------- 130 (1033)
Q Consensus 93 ~~~l~g~~~~~~~~l~~L~~L~L-~~n~l~~~~p~~~~~----------------------------------------- 130 (1033)
+++++|.+|+++++|++|++|+| ++|.++|..|-....
T Consensus 332 ~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp TTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred cCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 99999999999999999999999 899998875432111
Q ss_pred ----------cccccEEeccc--CCCCCCCCccccCCCCCcEEEcccccccC-----------------CCCCCcc--cc
Q 042075 131 ----------LRRLQVLALHN--NSIGGEIPANISSCSNLIRVRLSSNELVG-----------------KIPSELG--SL 179 (1033)
Q Consensus 131 ----------l~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l 179 (1033)
...++.+.++. |+++| +|..|+++++|++|+|++|+|+| .+|..++ ++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L 490 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNL 490 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred ccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccC
Confidence 11222222222 55555 56666666666666666666665 2555544 55
Q ss_pred cccceeeecccccCCCCCCCCCCCCCCcEEEcccCc-CCC-cCCccccccC-------CCCcccccccccCCCCcc--cc
Q 042075 180 SKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNN-LDG-SIPDTFGWLK-------NLVNLTMAQNRLSGTIPS--SI 248 (1033)
Q Consensus 180 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l 248 (1033)
++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..|+.++ +|++|+|++|+++ .+|. .+
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 555555555555555555555555555555555555 554 4555444443 5555555555555 4554 55
Q ss_pred cCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCC-ccccccccccccCcCcchhhhcccc
Q 042075 249 FNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASN-LEVFQVNSNKLTGEVPYLEKLQRLS 327 (1033)
Q Consensus 249 ~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~l~~l~~L~ 327 (1033)
.++++|+.|+|++|+++ .+| .+..+++|++|+|++|+++ .+|..+..+++ |+.|+|++|+++..
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp--~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~l----------- 634 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE--AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYI----------- 634 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC--CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSC-----------
T ss_pred hcCCCCCEEECCCCCcc-cch--hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcC-----------
Confidence 55555555555555555 444 2334455555555555555 44444555544 55555555544422
Q ss_pred ceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCcccccccc-CcccEEEccCCCCCccCCcc---cc--C
Q 042075 328 HFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFS-TTLEVLLLDSNKIFGNIPAA---FG--K 401 (1033)
Q Consensus 328 ~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~-~~L~~L~L~~N~i~~~~p~~---~~--~ 401 (1033)
|..+.... ++|+.|++++|++++.+|.. +. .
T Consensus 635 -------------------------------------------p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~ 671 (876)
T 4ecn_A 635 -------------------------------------------PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYK 671 (876)
T ss_dssp -------------------------------------------CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCC
T ss_pred -------------------------------------------chhhhccccCCCCEEECcCCcCCCccccchhhhcccc
Confidence 21111111 23666777777776655432 22 2
Q ss_pred CCCCCEEEcccCcccccCChh-hhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCCCCcccEEe
Q 042075 402 FVKLLRLEMWNNRLSGTIPPA-IGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQSETLTIID 480 (1033)
Q Consensus 402 l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 480 (1033)
+++|+.|+|++|+++ .+|.. +..+++|+.|+|++|+++ .+|..+... .+..+.++++|++|+
T Consensus 672 ~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~---------------~~~~l~nl~~L~~L~ 734 (876)
T 4ecn_A 672 GINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKP---------------KDGNYKNTYLLTTID 734 (876)
T ss_dssp CCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSC---------------TTSCCTTGGGCCEEE
T ss_pred CCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcc---------------ccccccccCCccEEE
Confidence 347777888888877 44544 446777888888887777 555443221 011123344666666
Q ss_pred cCCCccCCCCCcccc--CchhHHhhhhccCccccCCcCCccccccccceEEccc------cccccccCccccccccccee
Q 042075 481 LSNNNLTGTIPPQLL--GLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFE------NKLRGEIPRTLGSCIKLELL 552 (1033)
Q Consensus 481 Ls~N~l~~~~p~~~~--~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L 552 (1033)
|++|+|+ .+|..++ .+.++ +.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|
T Consensus 735 Ls~N~L~-~lp~~l~~~~l~~L-~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L 811 (876)
T 4ecn_A 735 LRFNKLT-SLSDDFRATTLPYL-SNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQL 811 (876)
T ss_dssp CCSSCCC-CCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred CCCCCCc-cchHHhhhccCCCc-CEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEE
Confidence 6666666 5666554 44444 566666666664 566666666666666655 55666666666666666666
Q ss_pred ecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCc
Q 042075 553 QMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFE 608 (1033)
Q Consensus 553 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 608 (1033)
+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|++|++.
T Consensus 812 ~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 812 QIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp ECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 6666666 45666554 46666666666666555555555555555555555543
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6e-57 Score=558.42 Aligned_cols=522 Identities=23% Similarity=0.250 Sum_probs=458.1
Q ss_pred CeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEc
Q 042075 84 QRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRL 163 (1033)
Q Consensus 84 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 163 (1033)
.+++.|+|+++.+++..+..++++++|++|+|++|++++..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 36889999999999988889999999999999999999655567999999999999999999877789999999999999
Q ss_pred ccccccCCCCCCcccccccceeeecccccCCCCCCCCC--CCCCCcEEEcccCcCCCcCCcccccc--------------
Q 042075 164 SSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFG--NLSSISFLFLSRNNLDGSIPDTFGWL-------------- 227 (1033)
Q Consensus 164 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l-------------- 227 (1033)
++|.+++..|..++++++|++|++++|++++..+..+. .+++|++|++++|++++..|..|..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999999999999999999999999977776554 56899999999999999888877755
Q ss_pred -------------CCCCcccccccccCCCCcccccCCCc--eeEEeccCccccCccCccccccccccceeeecccccCCC
Q 042075 228 -------------KNLVNLTMAQNRLSGTIPSSIFNISS--ITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGA 292 (1033)
Q Consensus 228 -------------~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 292 (1033)
++|++|++++|++++..|..+.+++. |+.|++++|.+++..|. .+..+++|++|+|++|++++.
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGND-SFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSCCBSEE
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcc-cccCcccccEeeCCCCccCcc
Confidence 46788889999999888999988865 99999999999966554 445799999999999999999
Q ss_pred CCccCcCCCCccccccccccccCc-----Cc-----chhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeec
Q 042075 293 IPPAISNASNLEVFQVNSNKLTGE-----VP-----YLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHIN 362 (1033)
Q Consensus 293 ~p~~~~~l~~L~~L~Ls~N~l~~~-----~~-----~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~ 362 (1033)
.|..+..+++|++|++++|...+. .| .+..+++|++|++++|.+...... .+.++++|+.++++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN------MFTGLINLKYLSLS 361 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT------TTTTCTTCCEEECT
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh------HhccccCCcEEECC
Confidence 999999999999999999876642 22 467889999999999999875443 35678899999999
Q ss_pred ccccCCC-Cccccc-cc-cCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCC-hhhhcCCCCcEEEccccc
Q 042075 363 INNFGGL-LPACIS-NF-STTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIP-PAIGELQNLRELRLQENR 438 (1033)
Q Consensus 363 ~n~l~~~-ip~~~~-~~-~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 438 (1033)
.|.+... ++...+ .. .++|+.|++++|++++..|.+|..+++|++|++++|++++.+| ..|..+++|++|+|++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 9986543 232222 11 1589999999999999999999999999999999999987666 789999999999999999
Q ss_pred cccccCcccccce-eceeeccccccC--CCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCc
Q 042075 439 FLGNIPPSIGNLK-LFNLQLSYNFLQ--GSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPI 515 (1033)
Q Consensus 439 l~~~~p~~~~~l~-L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~ 515 (1033)
+.+..+..|..++ |+.|++++|.+. +.+|..|..+++|++|+|++|++++..|..+.++.++ +.|++++|++++..
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccc
Confidence 9999999999987 999999999997 6789999999999999999999996555567777777 99999999998642
Q ss_pred C--------CccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccC
Q 042075 516 P--------NEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKI 587 (1033)
Q Consensus 516 p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 587 (1033)
+ ..|..+++|+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 2 23789999999999999999544557999999999999999999777777899999999999999999988
Q ss_pred Ccccc-cccccceeecCCCcCcccCCC
Q 042075 588 PEFLV-GFQLLEYLNLSNNDFEGMVPT 613 (1033)
Q Consensus 588 p~~~~-~l~~L~~L~ls~N~l~g~~p~ 613 (1033)
|..+. .+++|+.|++++|++.+..+.
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hhHhcccccccCEEEccCCCcccCCcc
Confidence 88887 899999999999999998875
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-56 Score=560.76 Aligned_cols=520 Identities=19% Similarity=0.199 Sum_probs=441.7
Q ss_pred cceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccC-CccccccccccEEecccCCCCCCCC
Q 042075 71 CQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEI-PSEFDRLRRLQVLALHNNSIGGEIP 149 (1033)
Q Consensus 71 c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p 149 (1033)
|.|..|.+ . ..+++.|||+++.+++..+..|.++++|++|+|++|.+.+.+ |.+|.++++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~--l-p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--V-LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS--S-CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC--C-CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 56777776 2 457999999999999988899999999999999999777776 7889999999999999999998889
Q ss_pred ccccCCCCCcEEEcccccccCCCCCC--cccccccceeeecccccCCCCC-CCCCCCCCCcEEEcccCcCCCcCCccccc
Q 042075 150 ANISSCSNLIRVRLSSNELVGKIPSE--LGSLSKIEYFSVSYNNLTGSIP-PSFGNLSSISFLFLSRNNLDGSIPDTFGW 226 (1033)
Q Consensus 150 ~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 226 (1033)
..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..+..|..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999877765 9999999999999999997765 57999999999999999999999999998
Q ss_pred c--CCCCcccccccccCCCCcccccCCCc------eeEEeccCccccCccCccccccc--cccceeeecc---------c
Q 042075 227 L--KNLVNLTMAQNRLSGTIPSSIFNISS------ITVFDAGINQIQGVIPLDIGFTL--QNLQFFSVGR---------N 287 (1033)
Q Consensus 227 l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~ls~N~l~~~~p~~~~~~l--~~L~~L~L~~---------N 287 (1033)
+ ++|+.|+|++|.+++..|..+..+.+ |+.|++++|.+++.+|..+...+ .+++.|.++. |
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8 89999999999999999888877765 99999999999988887765432 5677777763 3
Q ss_pred ccCCCCCccCcCC--CCccccccccccccCcCc-chhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeeccc
Q 042075 288 QLTGAIPPAISNA--SNLEVFQVNSNKLTGEVP-YLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININ 364 (1033)
Q Consensus 288 ~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n 364 (1033)
.+.+..+..+..+ ++|+.|++++|.+++..+ .+..+++|+.|++++|.+...... .+..+++|+.|+++.|
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N 324 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------AFYGLDNLQVLNLSYN 324 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------TTTTCSSCCEEEEESC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------HhcCCCCCCEEECCCC
Confidence 4444444555554 689999999999988765 478899999999999998764432 3567788999999999
Q ss_pred ccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccC
Q 042075 365 NFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIP 444 (1033)
Q Consensus 365 ~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 444 (1033)
.+.+..|..+..+ ++|+.|++++|+|++..+..|.++++|++|+|++|.+++. + .+++|+.|++++|+++ .+|
T Consensus 325 ~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 325 LLGELYSSNFYGL-PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCSCCCSCSCSSC-TTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCC-CCC
T ss_pred CCCccCHHHhcCC-CCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcc-ccc
Confidence 9988888777766 6899999999999998899999999999999999999843 3 2889999999999998 556
Q ss_pred cccccceeceeeccccccCCCC-CCccCCCCcccEEecCCCccCCCCCcc-ccCchhHHhhhhccCcccc-----CCcCC
Q 042075 445 PSIGNLKLFNLQLSYNFLQGSI-PSSLGQSETLTIIDLSNNNLTGTIPPQ-LLGLSSLLIVLELSRNQLT-----GPIPN 517 (1033)
Q Consensus 445 ~~~~~l~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~ll~~L~ls~N~l~-----~~~p~ 517 (1033)
... ..++.|++++|++++.. +..+.++++|++|+|++|++++..+.. +..+.++ +.|++++|.++ +..|.
T Consensus 398 ~~~--~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L-~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KIN--LTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL-EQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CCC--TTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTC-CBCEEESCCCSSSCCSCCCSS
T ss_pred ccc--cccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcc-ccccCCCCccccccccccchh
Confidence 542 24889999999998643 234568999999999999998654443 3334444 99999999997 44556
Q ss_pred ccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCccccccccc
Q 042075 518 EVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLL 597 (1033)
Q Consensus 518 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 597 (1033)
.|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..+. +|
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L 549 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SL 549 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---Cc
Confidence 788999999999999999998899999999999999999999987777666 8999999999999999998764 78
Q ss_pred ceeecCCCcCcccCCCc
Q 042075 598 EYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 598 ~~L~ls~N~l~g~~p~~ 614 (1033)
+.|++++|++.+..+..
T Consensus 550 ~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 550 SVLDITHNKFICECELS 566 (844)
T ss_dssp CEEEEEEECCCCSSSCC
T ss_pred CEEEecCCCcccccccH
Confidence 89999999999988754
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.5e-56 Score=541.15 Aligned_cols=530 Identities=20% Similarity=0.201 Sum_probs=457.9
Q ss_pred EEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEccccc
Q 042075 88 ILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE 167 (1033)
Q Consensus 88 ~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 167 (1033)
.++..+.+++ .+|..+.. .+++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5778888887 56766653 78999999999998889999999999999999999998889999999999999999999
Q ss_pred ccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCccc
Q 042075 168 LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSS 247 (1033)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 247 (1033)
+++..|..|+++++|++|++++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|++++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99888999999999999999999999877888999999999999999999755455556999999999999999888999
Q ss_pred ccCCCcee--EEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCc-----Cc-c
Q 042075 248 IFNISSIT--VFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGE-----VP-Y 319 (1033)
Q Consensus 248 l~~l~~L~--~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~~-~ 319 (1033)
+..+++|+ .|++++|.+++..|..+ ...+|++|++++|. .++..+..+.++....+..+.+.+. .+ .
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~--~~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~ 247 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAF--DSAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAV 247 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTT--TTCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHh--hhccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhH
Confidence 99999999 99999999997666543 35789999999987 2344455555544443333322211 11 1
Q ss_pred hhhhc--cccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCc
Q 042075 320 LEKLQ--RLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPA 397 (1033)
Q Consensus 320 l~~l~--~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~ 397 (1033)
+..+. +|+.|++++|.+...... .+.++++|+.++++.|.+. .+|..+..+ ++|++|++++|.+++..|.
T Consensus 248 ~~~l~~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~ 319 (606)
T 3t6q_A 248 FEGLCEMSVESINLQKHYFFNISSN------TFHCFSGLQELDLTATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQI 319 (606)
T ss_dssp GGGGGGSEEEEEECTTCCCSSCCTT------TTTTCTTCSEEECTTSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGG
T ss_pred hchhhcCceeEEEeecCccCccCHH------HhccccCCCEEeccCCccC-CCChhhccc-ccCCEEECccCCcCcCchh
Confidence 33333 799999999999876543 3567889999999999998 678877665 7999999999999999999
Q ss_pred cccCCCCCCEEEcccCcccccCCh-hhhcCCCCcEEEcccccccccc--Ccccccce-eceeeccccccCCCCCCccCCC
Q 042075 398 AFGKFVKLLRLEMWNNRLSGTIPP-AIGELQNLRELRLQENRFLGNI--PPSIGNLK-LFNLQLSYNFLQGSIPSSLGQS 473 (1033)
Q Consensus 398 ~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l 473 (1033)
.+.++++|++|++++|.+.+.+|. .+..+++|++|++++|++++.. |..+..++ |++|++++|.+.+..|..|..+
T Consensus 320 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 399 (606)
T 3t6q_A 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399 (606)
T ss_dssp CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTC
T ss_pred hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCC
Confidence 999999999999999999876665 5999999999999999999776 78899987 9999999999999999999999
Q ss_pred CcccEEecCCCccCCCCCcc-ccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccc---cCccccccccc
Q 042075 474 ETLTIIDLSNNNLTGTIPPQ-LLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGE---IPRTLGSCIKL 549 (1033)
Q Consensus 474 ~~L~~L~Ls~N~l~~~~p~~-~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L 549 (1033)
++|++|++++|++++..|.. +..+.++ +.|++++|.+++..|..+..+++|+.|++++|++++. .+..+..+++|
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLL-KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTC-CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccC-CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 99999999999999777765 5666666 9999999999999999999999999999999999873 33679999999
Q ss_pred ceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCc-cccccccccccccc
Q 042075 550 ELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTE-GVFRNASITSVLGN 628 (1033)
Q Consensus 550 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 628 (1033)
++|+|++|++++..|..|+.+++|+.|+|++|++++.+|+.+..++.| +|++++|++++.+|.. ..+..+....+.||
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 557 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN 557 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTC
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCC
Confidence 999999999999999999999999999999999999999999999999 9999999999888764 44566677788899
Q ss_pred ccccCCc
Q 042075 629 LKLCGGT 635 (1033)
Q Consensus 629 ~~lcg~~ 635 (1033)
+..|..+
T Consensus 558 ~~~c~c~ 564 (606)
T 3t6q_A 558 PLDCTCS 564 (606)
T ss_dssp CEECSGG
T ss_pred CccccCC
Confidence 8888644
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-54 Score=530.11 Aligned_cols=527 Identities=18% Similarity=0.181 Sum_probs=450.0
Q ss_pred EEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEccccc
Q 042075 88 ILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE 167 (1033)
Q Consensus 88 ~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 167 (1033)
.++.++.+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 5788998887 5666554 889999999999998888899999999999999999998889999999999999999999
Q ss_pred ccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCC-cCCccccccCCCCcccccccccCCCCcc
Q 042075 168 LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDG-SIPDTFGWLKNLVNLTMAQNRLSGTIPS 246 (1033)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (1033)
+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 998889999999999999999999998888889999999999999999986 5799999999999999999999988888
Q ss_pred cccCCCcee----EEeccCccccCccCccccccccccceeeecccccC-CCCCccCcCCCCccccccccccccCcCc---
Q 042075 247 SIFNISSIT----VFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLT-GAIPPAISNASNLEVFQVNSNKLTGEVP--- 318 (1033)
Q Consensus 247 ~l~~l~~L~----~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--- 318 (1033)
.+..+++|+ .|++++|.++ .+|...+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.+...
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~ 249 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred hhhhhhccccccceeeccCCCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccc
Confidence 888777665 8999999998 4555555444 8999999999997 5677889999999999988776654211
Q ss_pred ----chhhhc--cccceee-ecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCC
Q 042075 319 ----YLEKLQ--RLSHFVI-TRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKI 391 (1033)
Q Consensus 319 ----~l~~l~--~L~~L~l-~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i 391 (1033)
.+..+. .++.+.+ ..|.+.. .+..+..+++|+.++++.|.+.. +| .+..+ ++|+.|++++|.+
T Consensus 250 ~~~~~~~~l~~l~l~~l~l~~~~~~~~-------~~~~~~~l~~L~~L~l~~~~~~~-l~-~l~~~-~~L~~L~l~~n~l 319 (606)
T 3vq2_A 250 FEPSIMEGLCDVTIDEFRLTYTNDFSD-------DIVKFHCLANVSAMSLAGVSIKY-LE-DVPKH-FKWQSLSIIRCQL 319 (606)
T ss_dssp CCGGGGTTGGGSEEEEEEECCCTTCCG-------GGGSCGGGTTCSEEEEESCCCCC-CC-CCCTT-CCCSEEEEESCCC
T ss_pred cChHHhhhhhhccHhheeccccccccc-------cccccccCCCCCEEEecCccchh-hh-hcccc-ccCCEEEcccccC
Confidence 112222 3444444 3444332 12236788999999999999865 55 44443 7999999999999
Q ss_pred CccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccc--cCcccccce-eceeeccccccCCCCCC
Q 042075 392 FGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGN--IPPSIGNLK-LFNLQLSYNFLQGSIPS 468 (1033)
Q Consensus 392 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~-L~~L~Ls~N~l~~~~p~ 468 (1033)
+.+| .+ .+++|++|++++|+..+.. .+..+++|++|+|++|++++. +|..+..++ |++|++++|.+++ +|.
T Consensus 320 -~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~ 393 (606)
T 3vq2_A 320 -KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSA 393 (606)
T ss_dssp -SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECC
T ss_pred -cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chh
Confidence 6777 55 9999999999999765544 678999999999999999976 488888887 9999999999985 678
Q ss_pred ccCCCCcccEEecCCCccCCCCC-ccccCchhHHhhhhccCccccCCcCCccccccccceEEcccccccc-ccCcccccc
Q 042075 469 SLGQSETLTIIDLSNNNLTGTIP-PQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRG-EIPRTLGSC 546 (1033)
Q Consensus 469 ~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l 546 (1033)
.+..+++|++|++++|++++..| ..+..+.++ +.|++++|.+++..|..+..+++|+.|++++|++++ .+|..|+.+
T Consensus 394 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hccCCCCCCeeECCCCccCCccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 99999999999999999997777 566777777 999999999999999999999999999999999998 479999999
Q ss_pred cccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCccccc-ccccccc
Q 042075 547 IKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVFR-NASITSV 625 (1033)
Q Consensus 547 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~-~~~~~~~ 625 (1033)
++|++|+|++|++++..|..++.+++|+.|+|++|++++.+|..+..+++|++|+|++|+|+..++.-..+. ++....+
T Consensus 473 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l 552 (606)
T 3vq2_A 473 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNL 552 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999995443323332 4666778
Q ss_pred cccccccCCcc
Q 042075 626 LGNLKLCGGTH 636 (1033)
Q Consensus 626 ~~n~~lcg~~~ 636 (1033)
.+|+..|+.+.
T Consensus 553 ~~N~~~c~c~~ 563 (606)
T 3vq2_A 553 TNNSVACICEH 563 (606)
T ss_dssp CSCCCCCSSTT
T ss_pred cCCCcccCCcc
Confidence 89998887654
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=537.89 Aligned_cols=521 Identities=21% Similarity=0.233 Sum_probs=439.6
Q ss_pred EEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCC-CccccCCCCCcEEEccccc
Q 042075 89 LDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEI-PANISSCSNLIRVRLSSNE 167 (1033)
Q Consensus 89 l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~ 167 (1033)
+|.++++++. +|. ..++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.
T Consensus 9 ~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 4555667774 454 4589999999999999999999999999999999999776677 7889999999999999999
Q ss_pred ccCCCCCCcccccccceeeecccccCCCCCCC--CCCCCCCcEEEcccCcCCCcCC-ccccccCCCCcccccccccCCCC
Q 042075 168 LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPS--FGNLSSISFLFLSRNNLDGSIP-DTFGWLKNLVNLTMAQNRLSGTI 244 (1033)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 244 (1033)
+++..|..|+++++|++|+|++|++++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|++++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 99888999999999999999999999877665 9999999999999999997765 58999999999999999999999
Q ss_pred cccccCC--CceeEEeccCccccCccCccccc-----cccccceeeecccccCCCCCccCcCC---CCccccccccccc-
Q 042075 245 PSSIFNI--SSITVFDAGINQIQGVIPLDIGF-----TLQNLQFFSVGRNQLTGAIPPAISNA---SNLEVFQVNSNKL- 313 (1033)
Q Consensus 245 p~~l~~l--~~L~~L~ls~N~l~~~~p~~~~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l- 313 (1033)
|..+..+ ++|+.|+++.|.+.+..|..+.. ....|++|++++|.+++..|..+... .+++.|.++.+.+
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc
Confidence 9999888 89999999999999888876542 11249999999999998888877653 5677777764333
Q ss_pred --------cCcCc-chhh--hccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCccc
Q 042075 314 --------TGEVP-YLEK--LQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLE 382 (1033)
Q Consensus 314 --------~~~~~-~l~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~ 382 (1033)
.+..+ .+.. .++|+.|++++|.+...... .+.++++|+.|+++.|.+.+..|..+..+ ++|+
T Consensus 245 ~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~ 317 (844)
T 3j0a_A 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR------VFETLKDLKVLNLAYNKINKIADEAFYGL-DNLQ 317 (844)
T ss_dssp CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC------CSSSCCCCCEEEEESCCCCEECTTTTTTC-SSCC
T ss_pred ccccccccCCCChhhhhccccCCccEEECCCCcccccChh------hhhcCCCCCEEECCCCcCCCCChHHhcCC-CCCC
Confidence 22211 1333 36899999999998764332 45678899999999999998888777665 6999
Q ss_pred EEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccc
Q 042075 383 VLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNF 461 (1033)
Q Consensus 383 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~ 461 (1033)
.|++++|.+++..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|.+++ ++. ++ |+.|++++|+
T Consensus 318 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~----~~~L~~L~l~~N~ 392 (844)
T 3j0a_A 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHF----IPSIPDIFLSGNK 392 (844)
T ss_dssp EEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CSS----CCSCSEEEEESCC
T ss_pred EEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-ccC----CCCcchhccCCCC
Confidence 99999999999999999999999999999999998888889999999999999999984 332 44 8999999999
Q ss_pred cCCCCCCccCCCCcccEEecCCCccCCCCCc--cccCchhHHhhhhccCccccCCcCC-ccccccccceEEccccccc--
Q 042075 462 LQGSIPSSLGQSETLTIIDLSNNNLTGTIPP--QLLGLSSLLIVLELSRNQLTGPIPN-EVGNLKNLEMLNVFENKLR-- 536 (1033)
Q Consensus 462 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~~~~ll~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-- 536 (1033)
++ .+|.. ..+++.|++++|++++ ++. .+..+.++ +.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 393 l~-~l~~~---~~~l~~L~ls~N~l~~-l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 466 (844)
T 3j0a_A 393 LV-TLPKI---NLTANLIHLSENRLEN-LDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466 (844)
T ss_dssp CC-CCCCC---CTTCCEEECCSCCCCS-STTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSS
T ss_pred cc-ccccc---ccccceeecccCcccc-CchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccc
Confidence 98 55554 4678999999999984 332 23456666 9999999999965443 4667899999999999997
Q ss_pred ---cccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCC
Q 042075 537 ---GEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPT 613 (1033)
Q Consensus 537 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 613 (1033)
+..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|+|.+|.
T Consensus 467 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~ 544 (844)
T 3j0a_A 467 WETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD 544 (844)
T ss_dssp CCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC
T ss_pred cccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh
Confidence 45567799999999999999999999999999999999999999999987777776 8999999999999999986
Q ss_pred cccccccccccccccccccCCc
Q 042075 614 EGVFRNASITSVLGNLKLCGGT 635 (1033)
Q Consensus 614 ~~~~~~~~~~~~~~n~~lcg~~ 635 (1033)
. +..+....+.+|+..|+.+
T Consensus 545 ~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 545 V--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp C--CSSCCEEEEEEECCCCSSS
T ss_pred H--hCCcCEEEecCCCcccccc
Confidence 4 5677777888999888544
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-52 Score=504.59 Aligned_cols=492 Identities=21% Similarity=0.235 Sum_probs=380.2
Q ss_pred CcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCC
Q 042075 70 FCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIP 149 (1033)
Q Consensus 70 ~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 149 (1033)
.|.|.|| |+.. +++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 3 ~C~~~~~-c~~~-----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDGR-----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp EECTTSE-EECT-----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred cCCCCce-EECC-----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh
Confidence 5999999 8643 34555 5666554 789999999999998889999999999999999999998888
Q ss_pred ccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCC-CCCCCCCCCCCCcEEEcccCcCCCcC-Ccccccc
Q 042075 150 ANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTG-SIPPSFGNLSSISFLFLSRNNLDGSI-PDTFGWL 227 (1033)
Q Consensus 150 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l 227 (1033)
..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..|+++++|++|++++|++.+.+ +..|+.+
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 999999999999999999998777789999999999999999997 45778999999999999999944444 4789999
Q ss_pred CCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCC--C-ccCcCCCCcc
Q 042075 228 KNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAI--P-PAISNASNLE 304 (1033)
Q Consensus 228 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~ 304 (1033)
++|++|++++|++++..|..+.++++|+.|+++.|.+. .+|..++..+++|++|++++|++++.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 99999999999999999999999999999999999986 666666667899999999999999753 2 2345678899
Q ss_pred ccccccccccCcCc-----chhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccC
Q 042075 305 VFQVNSNKLTGEVP-----YLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFST 379 (1033)
Q Consensus 305 ~L~Ls~N~l~~~~~-----~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~ 379 (1033)
.|++++|++++..+ .+..+.+|+.+++++|.+.............+..+ +
T Consensus 227 ~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l-------------------------~ 281 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSEL-------------------------G 281 (549)
T ss_dssp EEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCC-------------------------T
T ss_pred ceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhh-------------------------c
Confidence 99999999986533 24566778888888877654321111111112223 3
Q ss_pred cccEEEccCCCCCcc-----CCccccCCCCCCEEEcccCcccccCChhh-hcCCCCcEEEccccccccccCc---ccccc
Q 042075 380 TLEVLLLDSNKIFGN-----IPAAFGKFVKLLRLEMWNNRLSGTIPPAI-GELQNLRELRLQENRFLGNIPP---SIGNL 450 (1033)
Q Consensus 380 ~L~~L~L~~N~i~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~---~~~~l 450 (1033)
+|+.|.+.++.+... ++..+....+|++|++++|++. .+|..+ ..+++|++|+|++|++++.+|. .++.+
T Consensus 282 ~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l 360 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAW 360 (549)
T ss_dssp TCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSS
T ss_pred ccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhcc
Confidence 455555555554321 1222334456777777777776 455554 4677777777777777765532 35555
Q ss_pred e-eceeeccccccCCCCC--CccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccce
Q 042075 451 K-LFNLQLSYNFLQGSIP--SSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEM 527 (1033)
Q Consensus 451 ~-L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~ 527 (1033)
+ |++|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+..+.++ +.|++++|+++ .+|..+. ++|+.
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L-~~L~Ls~N~l~-~l~~~~~--~~L~~ 435 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM-RFLNLSSTGIR-VVKTCIP--QTLEV 435 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC-CEEECTTSCCS-CCCTTSC--TTCSE
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc-cEEECCCCCcc-cccchhc--CCceE
Confidence 5 7777777777765432 44677777777777777777 677766666665 77777777777 3454442 58999
Q ss_pred EEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcC
Q 042075 528 LNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDF 607 (1033)
Q Consensus 528 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 607 (1033)
|+|++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|||++|+|++.+|..+..+++|+.|++++|++
T Consensus 436 L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 436 LDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509 (549)
T ss_dssp EECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCB
T ss_pred EECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCc
Confidence 999999998643 57889999999999998 7776 57899999999999999998888999999999999999999
Q ss_pred cccCCCc
Q 042075 608 EGMVPTE 614 (1033)
Q Consensus 608 ~g~~p~~ 614 (1033)
+|.+|..
T Consensus 510 ~~~~~~~ 516 (549)
T 2z81_A 510 DCSCPRI 516 (549)
T ss_dssp CCCHHHH
T ss_pred cCCCccH
Confidence 9988853
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-51 Score=498.08 Aligned_cols=511 Identities=20% Similarity=0.203 Sum_probs=333.3
Q ss_pred CeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEc
Q 042075 84 QRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRL 163 (1033)
Q Consensus 84 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 163 (1033)
.+++.|||+++++++..+.+|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 35777888888887766667788888888888888887766777888888888888888887666677888888888888
Q ss_pred ccccccCCCCCCcccccccceeeecccccCC-CCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCC----Cccccccc
Q 042075 164 SSNELVGKIPSELGSLSKIEYFSVSYNNLTG-SIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNL----VNLTMAQN 238 (1033)
Q Consensus 164 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~N 238 (1033)
++|++++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 8888875555567788888888888888776 357778888888888888888877777777777777 77788888
Q ss_pred ccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccC------CCCCccCcCCCC--cccccccc
Q 042075 239 RLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLT------GAIPPAISNASN--LEVFQVNS 310 (1033)
Q Consensus 239 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~------~~~p~~~~~l~~--L~~L~Ls~ 310 (1033)
++++..|..+..+ +|+.|++++|......-......+.+++.+.+..+.+. ......+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 8876666665554 78888887774432211112223444444333322211 111122222222 44555555
Q ss_pred c-cccCcCc-chhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccC
Q 042075 311 N-KLTGEVP-YLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDS 388 (1033)
Q Consensus 311 N-~l~~~~~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~ 388 (1033)
| .+.+..+ .+..+++|+.|++++|.+...+.. +..+ +|+.++++.|.+. .+|.. ..++|+.|++++
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~-------~~~~-~L~~L~l~~n~~~-~l~~~---~l~~L~~L~l~~ 334 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF-------SYNF-GWQHLELVNCKFG-QFPTL---KLKSLKRLTFTS 334 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSCCBC-------CSCC-CCSEEEEESCBCS-SCCBC---BCSSCCEEEEES
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhhhhh-------hccC-CccEEeeccCccc-ccCcc---cccccCEEeCcC
Confidence 5 4554443 366677777777777665532111 1122 3333333333333 22221 113444555555
Q ss_pred CCCCccCCccccCCCCCCEEEcccCcccccC--ChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCC
Q 042075 389 NKIFGNIPAAFGKFVKLLRLEMWNNRLSGTI--PPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSI 466 (1033)
Q Consensus 389 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~ 466 (1033)
|.+.+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|++ .+..
T Consensus 335 n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l-----------------------~~~~ 389 (570)
T 2z63_A 335 NKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-----------------------ITMS 389 (570)
T ss_dssp CBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSE-----------------------EEEE
T ss_pred Ccccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcc-----------------------cccc
Confidence 544443333 44445555555555544332 44444455555555555544 4322
Q ss_pred CCccCCCCcccEEecCCCccCCCCCc-cccCchhHHhhhhccCccccCCcCCccccccccceEEccccccc-cccCcccc
Q 042075 467 PSSLGQSETLTIIDLSNNNLTGTIPP-QLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLR-GEIPRTLG 544 (1033)
Q Consensus 467 p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 544 (1033)
+. +..+++|++|++++|++++..|. .+..+.++ +.|++++|.+++..|..+..+++|+.|++++|+++ +.+|..+.
T Consensus 390 ~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 467 (570)
T 2z63_A 390 SN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467 (570)
T ss_dssp EE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred cc-ccccCCCCEEEccCCccccccchhhhhcCCCC-CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh
Confidence 22 55556666666666666544442 33344444 66666666666677778888999999999999997 67899999
Q ss_pred cccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCcccc-ccccc-
Q 042075 545 SCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVF-RNASI- 622 (1033)
Q Consensus 545 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~-~~~~~- 622 (1033)
.+++|++|+|++|++++..|.++..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|....+ .|+..
T Consensus 468 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~ 547 (570)
T 2z63_A 468 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKN 547 (570)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHT
T ss_pred cccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhc
Confidence 9999999999999999888999999999999999999999988888999999999999999999999976544 34332
Q ss_pred -ccccccccccCCc
Q 042075 623 -TSVLGNLKLCGGT 635 (1033)
Q Consensus 623 -~~~~~n~~lcg~~ 635 (1033)
..+.+.+ .|..|
T Consensus 548 ~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 548 SQKEQGSA-KCSGS 560 (570)
T ss_dssp GGGEESCC-BBTTT
T ss_pred cccCCCch-hhCCC
Confidence 2233443 56544
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-51 Score=446.12 Aligned_cols=264 Identities=29% Similarity=0.455 Sum_probs=204.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.+++++.++||+|+||+||+|+++. .||||+++.. .....++|.+|++++++++|||||+++++|. ++.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------CCe
Confidence 4578889999999999999999763 4999998743 2344578999999999999999999999863 235
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++|||||++|+|.++++. ....+++.++..|+.|||+||+|||++ +||||||||+|||+++++++||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~---------~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki 173 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEE
T ss_pred EEEEEEcCCCCCHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEE
Confidence 7999999999999999953 345699999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCC---CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG---SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+|||+|+...............||+.|||||++.+ ..|+.++|||||||++|||+||+.||....... .+......
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~ 252 (307)
T 3omv_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGR 252 (307)
T ss_dssp CCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHT
T ss_pred eeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhc
Confidence 99999987654433333334569999999999864 468999999999999999999999996322111 11111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
... .+... ..+..+++++.+++.+||+.||++||||+||++.|+.++...+
T Consensus 253 ~~~-------~p~~~-------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 253 GYA-------SPDLS-------------------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TCC-------CCCST-------------------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CCC-------CCCcc-------------------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 100 00000 0111345678999999999999999999999999999876543
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-51 Score=455.07 Aligned_cols=269 Identities=24% Similarity=0.386 Sum_probs=207.0
Q ss_pred CCCCccceecccCceeEEEEEeC-----CCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILD-----EGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
++|.+.++||+|+||+||+|+++ .+++.||||+++.......++|.+|++++++++|||||+++++|. .+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-----EG 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----EC
Confidence 35677899999999999999875 357899999998776667788999999999999999999999964 34
Q ss_pred CceeEEEEcccCCchhhhcccCCCCcc-----ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDE-----TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
+..++|||||++|+|.++++....... .......++|.+++.|+.|||+||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 578999999999999999975432211 112345799999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHH
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~ 939 (1033)
+++++||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||...... ...
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~ 270 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAI 270 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHH
Confidence 999999999999987654443333334569999999999999999999999999999999999 89998632111 011
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
..+... .+.+.+..+++++.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 271 ~~i~~g------------------------------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 271 DCITQG------------------------------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHT------------------------------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHcC------------------------------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111000 01111223456799999999999999999999999999998764
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.9e-52 Score=452.70 Aligned_cols=270 Identities=24% Similarity=0.391 Sum_probs=213.8
Q ss_pred CCCCccceecccCceeEEEEEeC-----CCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILD-----EGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|. ++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----eC
Confidence 46788899999999999999875 357889999998776667788999999999999999999999964 34
Q ss_pred CceeEEEEcccCCchhhhcccCCCCc---cccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITRED---ETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
+..++|||||++|+|.++++...... ........+++.++++|+.|||+||+|||++ +||||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 57899999999999999996532100 0112346799999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHH
Q 042075 863 MIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNF 941 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~ 941 (1033)
+++||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-----~~~ 239 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEV 239 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHH
Confidence 9999999999987654443333333458999999999999999999999999999999999 8999863211 111
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
.... ... .+.+.+..+++++.+++.+||+.||++||||+||.+.|+++.+..
T Consensus 240 ~~~i--------~~~-------------------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 240 IECI--------TQG-------------------RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HHHH--------HHT-------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHH--------HcC-------------------CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1100 000 001112234567999999999999999999999999999987643
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.5e-50 Score=443.48 Aligned_cols=265 Identities=21% Similarity=0.304 Sum_probs=208.8
Q ss_pred CCCccceecccCceeEEEEEeC-----CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 712 GFTSANLIGAGSFGSVYKGILD-----EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
++++.++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|. .+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----KD 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----EC
Confidence 4567889999999999999974 357889999997543 334578999999999999999999999964 34
Q ss_pred CceeEEEEcccCCchhhhcccCCCCcc------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDE------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (1033)
+..++|||||++|+|.++++....... .......+++.++++|+.|||+||+|||++ +||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence 578999999999999999964322111 112345799999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccH
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNL 938 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~ 938 (1033)
++++++||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..+
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~ 256 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDV 256 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 9999999999999987654433333334569999999999999999999999999999999999 8999863211 111
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSI 1016 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 1016 (1033)
...+... .+.+.+.++++++.++|.+||+.||++||||+||+++|+++
T Consensus 257 ~~~i~~~------------------------------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 VEMIRNR------------------------------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHTT------------------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHcC------------------------------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111100 00111223567799999999999999999999999999864
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-49 Score=480.19 Aligned_cols=505 Identities=22% Similarity=0.231 Sum_probs=407.6
Q ss_pred CCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCC
Q 042075 95 KLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPS 174 (1033)
Q Consensus 95 ~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 174 (1033)
+++ .+|..+. +.+++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|.
T Consensus 18 ~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 94 (570)
T 2z63_A 18 NFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG 94 (570)
T ss_dssp CCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred Ccc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHh
Confidence 444 3555443 5789999999999988888999999999999999999987788899999999999999999977788
Q ss_pred CcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCC-cCCccccccCCCCcccccccccCCCCcccccCCCc
Q 042075 175 ELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDG-SIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISS 253 (1033)
Q Consensus 175 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 253 (1033)
.|.++++|++|++++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..+..+++
T Consensus 95 ~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 174 (570)
T 2z63_A 95 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ 174 (570)
T ss_dssp TTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHT
T ss_pred hhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhc
Confidence 99999999999999999997666679999999999999999987 46899999999999999999999887888887777
Q ss_pred e----eEEeccCccccCccCccccccccccceeeecccccCC-CCCccCcCCCCccccccccccccCcCcchhhhccccc
Q 042075 254 I----TVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTG-AIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSH 328 (1033)
Q Consensus 254 L----~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~ 328 (1033)
| +.|++++|.+++..|. .+.. .+|++|++++|.... .++..+..+++++.+.+..+.+....
T Consensus 175 L~~~~~~L~l~~n~l~~~~~~-~~~~-~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~----------- 241 (570)
T 2z63_A 175 MPLLNLSLDLSLNPMNFIQPG-AFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG----------- 241 (570)
T ss_dssp CTTCCCEEECTTCCCCEECTT-TTTT-CEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCS-----------
T ss_pred cchhhhhcccCCCCceecCHH-Hhcc-CcceeEecccccccccchhhhhcCccccceeeeccccccCch-----------
Confidence 7 7888888888755443 3322 368888887775432 23445555666665555443332110
Q ss_pred eeeecCcCCCCCCccchhhcccccccCcceeeeccc-ccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCE
Q 042075 329 FVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININ-NFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLR 407 (1033)
Q Consensus 329 L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n-~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 407 (1033)
.+.......+ ..+.++ .++.++++.+ .+.+.+|..+..+ ++|+.|++++|.++ .+|..+..+ +|++
T Consensus 242 ------~l~~~~~~~~---~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~-~l~~~~~~~-~L~~ 308 (570)
T 2z63_A 242 ------NLEKFDKSAL---EGLCNL-TIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIE-RVKDFSYNF-GWQH 308 (570)
T ss_dssp ------SCEECCTTTT---GGGGGS-EEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEEC-SCCBCCSCC-CCSE
T ss_pred ------hhhhcchhhh---cccccc-chhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccch-hhhhhhccC-CccE
Confidence 0000011111 112222 2456666666 6667777776655 78999999999998 578888888 9999
Q ss_pred EEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccccCCCC--CCccCCCCcccEEecCCC
Q 042075 408 LEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSI--PSSLGQSETLTIIDLSNN 484 (1033)
Q Consensus 408 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N 484 (1033)
|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..++ |++|++++|.+++.. |..+..+++|++|++++|
T Consensus 309 L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n 383 (570)
T 2z63_A 309 LELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383 (570)
T ss_dssp EEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSC
T ss_pred EeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCC
Confidence 999999998 5665 5789999999999999877665 5565 999999999998654 778899999999999999
Q ss_pred ccCCCCCccccCchhHHhhhhccCccccCCcC-CccccccccceEEccccccccccCcccccccccceeeccccccc-Cc
Q 042075 485 NLTGTIPPQLLGLSSLLIVLELSRNQLTGPIP-NEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQ-GP 562 (1033)
Q Consensus 485 ~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ 562 (1033)
+++ .+|..+..+.++ +.|++++|.+++..| ..+..+++|+.|++++|++++..|..|.++++|++|+|++|+++ +.
T Consensus 384 ~l~-~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 461 (570)
T 2z63_A 384 GVI-TMSSNFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 461 (570)
T ss_dssp SEE-EEEEEEETCTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred ccc-cccccccccCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCcccc
Confidence 998 456667777777 999999999998766 57899999999999999999999999999999999999999998 68
Q ss_pred ccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCc-ccccccccccccccccccCCc
Q 042075 563 IPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTE-GVFRNASITSVLGNLKLCGGT 635 (1033)
Q Consensus 563 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lcg~~ 635 (1033)
+|..+..+++|+.|+|++|++++..|..+..+++|++|++++|++++.+|.. ..+..+....+.+|+..|..+
T Consensus 462 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred chhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999999999999999999999999999999999999999999999987753 455666777778887776544
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-50 Score=481.61 Aligned_cols=457 Identities=19% Similarity=0.249 Sum_probs=340.7
Q ss_pred EEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEccccc
Q 042075 88 ILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE 167 (1033)
Q Consensus 88 ~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 167 (1033)
.+|+++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5788888887 4666665 788888888888887777788888888888888888887778888888888888888888
Q ss_pred ccCCCCCCcccccccceeeecccccCC-CCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCC--Cccccccccc--CC
Q 042075 168 LVGKIPSELGSLSKIEYFSVSYNNLTG-SIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNL--VNLTMAQNRL--SG 242 (1033)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~ 242 (1033)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..|..+++| ++|++++|++ ++
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 87 56665 77888888888888876 467778888888888888888875 456677777 8888888888 77
Q ss_pred CCcccccCCC-ceeEEeccCccccCccCccccccccccceeeecccc-------cCCCCCccCcCCCCcccccccccccc
Q 042075 243 TIPSSIFNIS-SITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQ-------LTGAIPPAISNASNLEVFQVNSNKLT 314 (1033)
Q Consensus 243 ~~p~~l~~l~-~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (1033)
..|..+..+. +...+++++|.+.+.++...+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 7777777665 344566667776666666555556666666666665 443333 4455555555555555544
Q ss_pred CcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCcc
Q 042075 315 GEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGN 394 (1033)
Q Consensus 315 ~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~ 394 (1033)
+.... +..+ .. ..++|+.|++++|+++|.
T Consensus 234 ~~~~~------------------------------------------------~~~~-~~--~~~~L~~L~l~~n~l~~~ 262 (520)
T 2z7x_B 234 WNSFI------------------------------------------------RILQ-LV--WHTTVWYFSISNVKLQGQ 262 (520)
T ss_dssp HHHHH------------------------------------------------HHHH-HH--HTSSCSEEEEEEEEEESC
T ss_pred HHHHH------------------------------------------------HHHH-Hh--hhCcccEEEeecccccCc
Confidence 32100 0000 00 013566666666666666
Q ss_pred CCccc-----cCCCCCCEEEcccCcccccCC-hhhhcC---CCCcEEEccccccccccCcccccce-eceeeccccccCC
Q 042075 395 IPAAF-----GKFVKLLRLEMWNNRLSGTIP-PAIGEL---QNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQG 464 (1033)
Q Consensus 395 ~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~ 464 (1033)
+|..+ .++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..++ |++|++++|.+++
T Consensus 263 ~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~ 338 (520)
T 2z7x_B 263 LDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTD 338 (520)
T ss_dssp CCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCT
T ss_pred cccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccCh
Confidence 66666 7788888888888888 445 556555 67888888888876422 114555 8888888888888
Q ss_pred CCCCccCCCCcccEEecCCCccCC--CCCccccCchhHHhhhhccCccccCCcCC-ccccccccceEEccccccccccCc
Q 042075 465 SIPSSLGQSETLTIIDLSNNNLTG--TIPPQLLGLSSLLIVLELSRNQLTGPIPN-EVGNLKNLEMLNVFENKLRGEIPR 541 (1033)
Q Consensus 465 ~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~ll~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~ 541 (1033)
.+|..++.+++|++|+|++|++++ .+|..+..+.++ +.|++++|++++.+|. .+..+++|+.|++++|++++.+|.
T Consensus 339 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L-~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 417 (520)
T 2z7x_B 339 TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL-QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417 (520)
T ss_dssp TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTC-CEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGG
T ss_pred hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCC-CEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhh
Confidence 888888888888888888888885 455667777776 8888888888875665 488899999999999999988888
Q ss_pred ccccccccceeecccccccCcccccccCcccCCccccccccccccCCcc-cccccccceeecCCCcCcccCCCc
Q 042075 542 TLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEF-LVGFQLLEYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 542 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~ 614 (1033)
.+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|++|++++|+++|.++..
T Consensus 418 ~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 487 (520)
T 2z7x_B 418 CLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 487 (520)
T ss_dssp SCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred hhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCch
Confidence 775 79999999999999 89998889999999999999999 56665 889999999999999999987743
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=9.9e-49 Score=481.25 Aligned_cols=539 Identities=21% Similarity=0.207 Sum_probs=391.4
Q ss_pred CCCCCCCCCC----CCccee----eeEecCCC--------CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccc
Q 042075 59 GVFGSWNESI----HFCQWH----GVTCSRRQ--------HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHH 122 (1033)
Q Consensus 59 ~~~~~W~~~~----~~c~w~----gv~C~~~~--------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~ 122 (1033)
..+++|+.+. ++|.|. .|.|...+ +..++.|||++|++++..+.+|.++++|++|||++|+|++
T Consensus 11 ~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~ 90 (635)
T 4g8a_A 11 DKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 90 (635)
T ss_dssp --------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred chhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC
Confidence 3455555321 345543 46786432 2346677777777776555667777777777777777776
Q ss_pred cCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCC-CCCCCC
Q 042075 123 EIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGS-IPPSFG 201 (1033)
Q Consensus 123 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~ 201 (1033)
..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++. +|..++
T Consensus 91 i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 170 (635)
T 4g8a_A 91 IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 170 (635)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG
T ss_pred cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhc
Confidence 6666677777777777777777755555677777777777777777755556677777777777777777643 456666
Q ss_pred CCCCCcEEEcccCcCCCcCCccccccCCCC----cccccccccCCCCcccccCCCceeEEeccCccccCccCcccccccc
Q 042075 202 NLSSISFLFLSRNNLDGSIPDTFGWLKNLV----NLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQ 277 (1033)
Q Consensus 202 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~ 277 (1033)
++++|++|+|++|+|++..|..|..+.+++ .++++.|+++.. +........+..++++.|.....++...+..+.
T Consensus 171 ~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i-~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~ 249 (635)
T 4g8a_A 171 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI-QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLA 249 (635)
T ss_dssp GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEE-CTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTT
T ss_pred cchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccccc-CcccccchhhhhhhhhcccccccccchhhcCCc
Confidence 777777777777777766676666665544 456667777633 333444455666777777655444444455566
Q ss_pred ccceeeeccccc------CCCCCccCcCCCCcccccccccccc----CcCcchhhhccccceeeecCcCCCCCCccchhh
Q 042075 278 NLQFFSVGRNQL------TGAIPPAISNASNLEVFQVNSNKLT----GEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFL 347 (1033)
Q Consensus 278 ~L~~L~L~~N~l------~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 347 (1033)
.++...+..+.. .......+..+..+...++..+... +....+..+.+++.+.+.+|.+...
T Consensus 250 ~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-------- 321 (635)
T 4g8a_A 250 GLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV-------- 321 (635)
T ss_dssp TCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--------
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--------
Confidence 666555544332 2233344555555555555544432 2333456677788888888766532
Q ss_pred cccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCccc--ccCChhhhc
Q 042075 348 CSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLS--GTIPPAIGE 425 (1033)
Q Consensus 348 ~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~ 425 (1033)
..+.....|+.+++..|.+.+..+..+ ..|+.+++.+|.+... .....+++|+.|++++|.+. +..+..+..
T Consensus 322 ~~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 322 KDFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp GGGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccchhhhhhhcccccccCcCcccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhh
Confidence 234556678889999988877654432 5789999999988643 34567899999999999985 456788889
Q ss_pred CCCCcEEEccccccccccCcccccce-eceeeccccccCCCCC-CccCCCCcccEEecCCCccCCCCCccccCchhHHhh
Q 042075 426 LQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIP-SSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIV 503 (1033)
Q Consensus 426 l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~ 503 (1033)
+.+|+.|+++.|.+.+ .+..+..+. |+.+++++|+.....+ ..|..+++++.+++++|++.+..|..+..+..+ +.
T Consensus 396 ~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L-~~ 473 (635)
T 4g8a_A 396 TISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EV 473 (635)
T ss_dssp CSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CE
T ss_pred hhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhh-hh
Confidence 9999999999999884 555666676 9999999888776654 568899999999999999997777777777766 99
Q ss_pred hhccCccc-cCCcCCccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCcccccccc
Q 042075 504 LELSRNQL-TGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNN 582 (1033)
Q Consensus 504 L~ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 582 (1033)
|++++|.+ .+..|..|..+++|++|||++|+|++..|.+|+++++|++|+|++|+|++..|..|..+++|+.|||++|+
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 553 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSC
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCc
Confidence 99999975 45678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccccc-cccceeecCCCcCcccCCCc
Q 042075 583 LSGKIPEFLVGF-QLLEYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 583 l~~~~p~~~~~l-~~L~~L~ls~N~l~g~~p~~ 614 (1033)
|++.+|..+..+ ++|++|+|++|+|++...-.
T Consensus 554 l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 554 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp CCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred CCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 999999999988 68999999999999977643
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.8e-50 Score=443.18 Aligned_cols=251 Identities=20% Similarity=0.279 Sum_probs=207.2
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeE
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 790 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 790 (1033)
+.|++.++||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||++++++ ..++..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEEE
Confidence 4689999999999999999999999999999999866555567789999999999999999999994 45568999
Q ss_pred EEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeec
Q 042075 791 VFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDF 870 (1033)
Q Consensus 791 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~Df 870 (1033)
|||||+||+|.++++. ..+++.++..++.||+.||+|||++ +||||||||+|||+++++.+||+||
T Consensus 149 vmEy~~gg~L~~~l~~-----------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecC
Confidence 9999999999999842 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcch
Q 042075 871 GLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHV 950 (1033)
Q Consensus 871 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 950 (1033)
|+|+.+....... ...+||+.|||||++.+..|+.++||||+||++|||++|++||.... ............+...
T Consensus 215 Gla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~~ 290 (346)
T 4fih_A 215 GFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPRL 290 (346)
T ss_dssp TTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSCCCC
T ss_pred cCceecCCCCCcc--cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCCC
Confidence 9999875443322 23469999999999999999999999999999999999999986321 1111111111111000
Q ss_pred hhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 951 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 951 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.....+++++.+++.+||+.||++|||++|+++.
T Consensus 291 ----------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 ----------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp ----------------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----------------------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0011234568999999999999999999999874
No 23
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-49 Score=480.52 Aligned_cols=479 Identities=18% Similarity=0.201 Sum_probs=394.5
Q ss_pred cceeeeEecCCC-CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCC
Q 042075 71 CQWHGVTCSRRQ-HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIP 149 (1033)
Q Consensus 71 c~w~gv~C~~~~-~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 149 (1033)
|++.+++.-+.. ..+++.|+|+++++++..+..++++++|++|+|++|++++..|..|+.+++|++|+|++|.+++..|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 445555443221 2478999999999998888899999999999999999999888999999999999999999998777
Q ss_pred ccccCCCCCcEEEcccccccC-CCCCCcccccccceeeecccccCCCCC-CCCCCCCCCcEEEcccCcCCCcCCcccccc
Q 042075 150 ANISSCSNLIRVRLSSNELVG-KIPSELGSLSKIEYFSVSYNNLTGSIP-PSFGNLSSISFLFLSRNNLDGSIPDTFGWL 227 (1033)
Q Consensus 150 ~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 227 (1033)
..|+++++|++|+|++|.+++ .+|..++++++|++|++++|++.+.+| ..|.++++|++|++++|++++..|..|+.+
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 789999999999999999986 467899999999999999999555555 689999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCcccc-cCCCceeEEeccCccccCcc--CccccccccccceeeecccccCCCCC----ccCcCC
Q 042075 228 KNLVNLTMAQNRLSGTIPSSI-FNISSITVFDAGINQIQGVI--PLDIGFTLQNLQFFSVGRNQLTGAIP----PAISNA 300 (1033)
Q Consensus 228 ~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~ls~N~l~~~~--p~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l 300 (1033)
++|++|++++|.+. .+|..+ ..+++|+.|++++|++++.. |..+...+.+|++|++++|.+++..+ ..+..+
T Consensus 172 ~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~ 250 (549)
T 2z81_A 172 RDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYI 250 (549)
T ss_dssp SEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGC
T ss_pred ccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhh
Confidence 99999999999987 455544 57899999999999998743 34444568899999999999986544 345678
Q ss_pred CCccccccccccccCcC-------cchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccc
Q 042075 301 SNLEVFQVNSNKLTGEV-------PYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPAC 373 (1033)
Q Consensus 301 ~~L~~L~Ls~N~l~~~~-------~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~ 373 (1033)
++|+.+++++|.+.+.. +.+..+.+|+.|.+.++.+..... .. .++ .
T Consensus 251 ~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--------~~-----------------~l~-~ 304 (549)
T 2z81_A 251 LELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--------FY-----------------DLS-T 304 (549)
T ss_dssp TTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--------SC-----------------CCC-H
T ss_pred ccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--------cc-----------------cch-h
Confidence 89999999999998753 234667788888888887653210 00 011 1
Q ss_pred cccccCcccEEEccCCCCCccCCccc-cCCCCCCEEEcccCcccccCCh---hhhcCCCCcEEEccccccccccC--ccc
Q 042075 374 ISNFSTTLEVLLLDSNKIFGNIPAAF-GKFVKLLRLEMWNNRLSGTIPP---AIGELQNLRELRLQENRFLGNIP--PSI 447 (1033)
Q Consensus 374 ~~~~~~~L~~L~L~~N~i~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p--~~~ 447 (1033)
+....++|+.|++++|+++ .+|..+ .++++|++|++++|++++.+|. .++.+++|++|+|++|++++..+ ..+
T Consensus 305 ~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 383 (549)
T 2z81_A 305 VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383 (549)
T ss_dssp HHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHG
T ss_pred hhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhh
Confidence 1122357888888888887 455555 6788999999999999876653 37788899999999999886433 457
Q ss_pred ccce-eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccc
Q 042075 448 GNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLE 526 (1033)
Q Consensus 448 ~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~ 526 (1033)
..++ |++|+|++|+++ .+|..+..+++|++|++++|+++ .+|..+. .+ |+.|++++|+|++.+ ..+++|+
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~-L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QT-LEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TT-CSEEECCSSCCSCCC----CCCTTCC
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CC-ceEEECCCCChhhhc----ccCChhc
Confidence 7776 899999999998 68888899999999999999998 5665543 23 489999999999643 5789999
Q ss_pred eEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCC
Q 042075 527 MLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIP 588 (1033)
Q Consensus 527 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 588 (1033)
+|+|++|+|+ .+|. .+.+++|++|+|++|++++.+|..+..+++|+.|+|++|++++..|
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9999999999 7776 5789999999999999999999999999999999999999998777
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.2e-50 Score=442.85 Aligned_cols=253 Identities=20% Similarity=0.289 Sum_probs=200.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||++++++ .+++.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~~~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EENGS 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EECCE
Confidence 46899999999999999999999999999999999753 334457899999999999999999999994 45668
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.|+|||||+||+|.++++. .....+++.+++.|+.||+.||+|||++ |||||||||+|||+++++.+||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~--------~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl 166 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINA--------QKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQL 166 (350)
T ss_dssp EEEEEECCTTCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEE
T ss_pred EEEEEeCCCCCcHHHHHHH--------cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEE
Confidence 9999999999999999953 2345678999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..........
T Consensus 167 ~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~ 239 (350)
T 4b9d_A 167 GDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIIS 239 (350)
T ss_dssp CSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHH
T ss_pred cccccceeecCCcc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHc
Confidence 99999987643221 1223459999999999999999999999999999999999999996321 1111111100
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. .... +..+++++.+++.+||+.||++|||++|+++.
T Consensus 240 ~~--------~~~~-------------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 240 GS--------FPPV-------------------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TC--------CCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CC--------CCCC-------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 0000 01124568999999999999999999999874
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.9e-50 Score=435.61 Aligned_cols=250 Identities=19% Similarity=0.267 Sum_probs=207.4
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|++++++++|||||+++++ +++++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence 5799999999999999999999999999999999743 23345778999999999999999999999 556678
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.|+||||++||+|.++++ ..+.+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||
T Consensus 107 ~yivmEy~~gG~L~~~i~----------~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIR----------KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEE
Confidence 999999999999999994 345699999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+|+.+............+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..........
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~ 248 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFAKIIK 248 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHH
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHc
Confidence 99999998765444443444569999999999999999999999999999999999999996321 1111111100
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
.. . ..+...++++.+++.+||+.||++|||++|++.
T Consensus 249 ~~--------~--------------------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 249 LE--------Y--------------------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp TC--------C--------------------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred CC--------C--------------------CCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 00 0 000112345889999999999999999998754
No 26
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-49 Score=444.12 Aligned_cols=275 Identities=23% Similarity=0.302 Sum_probs=216.7
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCC-----CeEEEEEEeeccC-chhHHHHHHHHHHHHhcCC-CCceeEeeeeccc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEG-----KTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRH-RNLVKILTACSGV 780 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~ 780 (1033)
...++|++.+.||+|+||+||+|++... ++.||||+++... ....+++.+|++++++++| ||||+++|+|.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~-- 138 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-- 138 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE--
Confidence 3457899999999999999999998643 4789999997543 3345779999999999965 89999999973
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCc------cccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCC
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITRED------ETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKP 854 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (1033)
..++..++|||||++|+|.++++...... ........+++.+++.++.|||+||+|||++ +||||||||
T Consensus 139 --~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~ 213 (353)
T 4ase_A 139 --KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213 (353)
T ss_dssp --CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred --ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence 33456899999999999999996532211 0011245689999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 042075 855 SNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFE 933 (1033)
Q Consensus 855 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~ 933 (1033)
+|||+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999997765544444444568999999999999999999999999999999998 8999864321
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQL 1013 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1013 (1033)
.+ .+........ ++..+..+++++.++|.+||+.||++|||++||+++|
T Consensus 294 ~~-~~~~~i~~g~------------------------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L 342 (353)
T 4ase_A 294 DE-EFCRRLKEGT------------------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342 (353)
T ss_dssp SH-HHHHHHHHTC------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HH-HHHHHHHcCC------------------------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 11 1111111110 1111223456789999999999999999999999999
Q ss_pred HHHHHHh
Q 042075 1014 QSIKNIL 1020 (1033)
Q Consensus 1014 ~~i~~~~ 1020 (1033)
+++.+.-
T Consensus 343 ~~llq~~ 349 (353)
T 4ase_A 343 GNLLQAN 349 (353)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9987654
No 27
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.2e-49 Score=435.99 Aligned_cols=258 Identities=21% Similarity=0.223 Sum_probs=206.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.+.|++.++||+|+||+||+|+++.+++.||||+++.... ..+|+.++++++|||||++++++ .+++..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~-----~~~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAV-----REGPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEE-----EECCEEE
Confidence 4568888999999999999999999999999999975432 24799999999999999999995 4556899
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC-cEEEe
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM-IAHVG 868 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kL~ 868 (1033)
+|||||+||+|.++++ ....+++.++..++.||+.||+|||++ +||||||||+|||++.++ ++||+
T Consensus 127 ivmEy~~gg~L~~~l~----------~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~ 193 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIK----------QMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 193 (336)
T ss_dssp EEECCCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEEC
T ss_pred EEEeccCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEe
Confidence 9999999999999995 335699999999999999999999999 999999999999999987 69999
Q ss_pred ecccceecCCCCcc---ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 869 DFGLATFLPLSHAQ---TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 869 DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|||+|+........ ......+||+.|||||++.+..|+.++||||+||++|||+||+.||......+ .+.......
T Consensus 194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~ 272 (336)
T 4g3f_A 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEP 272 (336)
T ss_dssp CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSC
T ss_pred eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCC
Confidence 99999987543321 12223469999999999999999999999999999999999999996432221 111111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
. ... ..+..+++++.+++.+||+.||++|||+.|+++.|.......
T Consensus 273 ~--~~~---------------------------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 273 P--PIR---------------------------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp C--GGG---------------------------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred C--Cch---------------------------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 0 000 011124566899999999999999999999999998876543
No 28
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-49 Score=426.56 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=197.6
Q ss_pred CccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeEE
Q 042075 714 TSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 791 (1033)
Q Consensus 714 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 791 (1033)
++.++||+|+||+||+|++..+++.||+|++... .....+++.+|++++++++|||||+++++|.+.. ..++..|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 5677899999999999999999999999998743 3344577999999999999999999999874321 234568999
Q ss_pred EEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec-CCCcEEEeec
Q 042075 792 FEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD-EEMIAHVGDF 870 (1033)
Q Consensus 792 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~Df 870 (1033)
||||+||+|.++++ ....+++.++..|+.||+.||+|||++ .++||||||||+|||++ +++.+||+||
T Consensus 108 mEy~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 108 TELMTSGTLKTYLK----------RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred EeCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeC
Confidence 99999999999995 345689999999999999999999998 22399999999999998 4789999999
Q ss_pred ccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcch
Q 042075 871 GLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHV 950 (1033)
Q Consensus 871 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 950 (1033)
|+|+...... ....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ..............
T Consensus 177 Gla~~~~~~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~~ 247 (290)
T 3fpq_A 177 GLATLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVK 247 (290)
T ss_dssp TGGGGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCC
T ss_pred cCCEeCCCCc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCCC
Confidence 9998643322 123459999999999865 69999999999999999999999985321 11111111111000
Q ss_pred hhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 951 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 951 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
... .+..+++++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~--------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 PAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC--------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 00112345889999999999999999999876
No 29
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.7e-50 Score=486.73 Aligned_cols=450 Identities=18% Similarity=0.233 Sum_probs=381.7
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEecccCCC------CC------CCCccccCCCCCcEEEcccccccCCCCCC
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSI------GG------EIPANISSCSNLIRVRLSSNELVGKIPSE 175 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 175 (1033)
.+++.|+|++|+++|.+|++|++|++|++|+|++|.+ .| .+|... +.+|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4688999999999999999999999999999999976 33 444444 56777 888999888888877
Q ss_pred ccc-ccccceeeecccccCCCCCCCCCCCCCCcEEEcc--cCcCCCcCCccccccCCCCcccccccccCCC---------
Q 042075 176 LGS-LSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLS--RNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT--------- 243 (1033)
Q Consensus 176 ~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------- 243 (1033)
+.. +.++..+++....+.. .....++.+.+. +|+++| +|.+|+++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 763 4456666665544431 122334444444 689998 999999999999999999999986
Q ss_pred --------Cccccc--CCCceeEEeccCccccCccCccccccccccceeeecccc-cCC-CCCccCcCC------CCccc
Q 042075 244 --------IPSSIF--NISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQ-LTG-AIPPAISNA------SNLEV 305 (1033)
Q Consensus 244 --------~p~~l~--~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~ 305 (1033)
+|..+. ++++|++|++++|.+.+.+|..+. .+++|++|+|++|+ ++| .+|..++.+ ++|++
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh-cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 999999 999999999999999999997655 79999999999999 998 899988887 89999
Q ss_pred cccccccccCcCc--chhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccE
Q 042075 306 FQVNSNKLTGEVP--YLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEV 383 (1033)
Q Consensus 306 L~Ls~N~l~~~~~--~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~ 383 (1033)
|++++|+++..++ .+..+ ++|+.
T Consensus 310 L~L~~n~l~~ip~~~~l~~l-------------------------------------------------------~~L~~ 334 (636)
T 4eco_A 310 IYIGYNNLKTFPVETSLQKM-------------------------------------------------------KKLGM 334 (636)
T ss_dssp EECCSSCCSSCCCHHHHTTC-------------------------------------------------------TTCCE
T ss_pred EECCCCcCCccCchhhhccC-------------------------------------------------------CCCCE
Confidence 9999999884333 23222 46788
Q ss_pred EEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCC-CcEEEccccccccccCcccccce---eceeeccc
Q 042075 384 LLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQN-LRELRLQENRFLGNIPPSIGNLK---LFNLQLSY 459 (1033)
Q Consensus 384 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~---L~~L~Ls~ 459 (1033)
|++++|+++|.+| .|.++++|++|++++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..+. |++|++++
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 8888888988888 9999999999999999999 88999999999 999999999999 8899888763 99999999
Q ss_pred cccCCCCCCccC-------CCCcccEEecCCCccCCCCCccccC-chhHHhhhhccCccccCCcCCcccc-c-------c
Q 042075 460 NFLQGSIPSSLG-------QSETLTIIDLSNNNLTGTIPPQLLG-LSSLLIVLELSRNQLTGPIPNEVGN-L-------K 523 (1033)
Q Consensus 460 N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~-~~~ll~~L~ls~N~l~~~~p~~~~~-l-------~ 523 (1033)
|.+++.+|..|. .+++|++|+|++|+++ .+|..++. +..+ +.|+|++|+++ .+|..+.. + +
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L-~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~ 488 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPL-SSINLMGNMLT-EIPKNSLKDENENFKNTY 488 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCC-SEEECCSSCCS-BCCSSSSEETTEECTTGG
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCC-CEEECCCCCCC-CcCHHHhccccccccccC
Confidence 999999999998 8889999999999999 78887665 5555 99999999999 66665433 2 3
Q ss_pred ccceEEccccccccccCcccc--cccccceeecccccccCcccccccCcccCCcccc------ccccccccCCccccccc
Q 042075 524 NLEMLNVFENKLRGEIPRTLG--SCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDL------SQNNLSGKIPEFLVGFQ 595 (1033)
Q Consensus 524 ~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~ 595 (1033)
+|+.|+|++|+++ .+|..+. .+++|++|+|++|++++ +|..+.++++|+.|+| ++|++.+.+|..+..++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 9999999999999 7898887 99999999999999997 9999999999999999 56889999999999999
Q ss_pred ccceeecCCCcCcccCCCcccccccccccccccccccC
Q 042075 596 LLEYLNLSNNDFEGMVPTEGVFRNASITSVLGNLKLCG 633 (1033)
Q Consensus 596 ~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lcg 633 (1033)
+|++|+|++|++ +.+|.. .+..+....+.+|+..|-
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISI 602 (636)
T ss_dssp SCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEE
T ss_pred CCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCccc
Confidence 999999999999 788875 335666667778876653
No 30
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=441.49 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=207.3
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeE
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 790 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 790 (1033)
+.|++.++||+|+||+||+|+++.+|+.||||+++.......+.+.+|+.+|++++|||||++++++ ..++..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCEEEE
Confidence 5699999999999999999999999999999999866656667789999999999999999999995 45568999
Q ss_pred EEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeec
Q 042075 791 VFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDF 870 (1033)
Q Consensus 791 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~Df 870 (1033)
|||||+||+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+||
T Consensus 226 VmEy~~gG~L~~~i~~-----------~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 226 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp EEECCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHhc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecC
Confidence 9999999999999842 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcch
Q 042075 871 GLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHV 950 (1033)
Q Consensus 871 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 950 (1033)
|+|+.+....... ...+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ............+..
T Consensus 292 Gla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~- 366 (423)
T 4fie_A 292 GFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPR- 366 (423)
T ss_dssp TTCEECCSSCCCB--CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCC-
T ss_pred ccceECCCCCccc--cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCC-
Confidence 9999775443322 23459999999999999999999999999999999999999985321 111111111111110
Q ss_pred hhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 951 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 951 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
+. ....+++++.+++.+||+.||++|||++|+++.
T Consensus 367 -------~~--------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 -------LK--------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -------CS--------------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -------Cc--------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 001124568999999999999999999999874
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.3e-49 Score=486.23 Aligned_cols=439 Identities=20% Similarity=0.284 Sum_probs=333.9
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEec-ccCCCCCCCCccccCC----CCCc--EEEc----------cccccc-
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLAL-HNNSIGGEIPANISSC----SNLI--RVRL----------SSNELV- 169 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l----~~L~--~L~L----------s~N~l~- 169 (1033)
.+++.|+|++|++.|.+|++|++|++|++|+| ++|.++|..|...... ..++ .+.. ....+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 56889999999999999999999999999999 9998888755332111 0000 0000 000000
Q ss_pred ----------CCCCCCcccccccceeeecc--cccCCCCCCCCCCCCCCcEEEcccCcCCC-----------------cC
Q 042075 170 ----------GKIPSELGSLSKIEYFSVSY--NNLTGSIPPSFGNLSSISFLFLSRNNLDG-----------------SI 220 (1033)
Q Consensus 170 ----------~~~p~~~~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 220 (1033)
...+........++.+.++. |++++ +|..|+++++|++|+|++|+|++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00111112223344444443 66776 66677777777777777777776 37
Q ss_pred Ccccc--ccCCCCcccccccccCCCCcccccCCCceeEEeccCcc-ccC-ccCcccc------ccccccceeeecccccC
Q 042075 221 PDTFG--WLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQ-IQG-VIPLDIG------FTLQNLQFFSVGRNQLT 290 (1033)
Q Consensus 221 p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~-l~~-~~p~~~~------~~l~~L~~L~L~~N~l~ 290 (1033)
|+.++ ++++|++|+|++|++.+.+|..+.++++|+.|+|++|+ +++ .+|..+. ..+++|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77766 88888888888888888888888888888888888887 777 6776543 23458999999999999
Q ss_pred CCCCc--cCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCC
Q 042075 291 GAIPP--AISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGG 368 (1033)
Q Consensus 291 ~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~ 368 (1033)
.+|. .+.++++|+.|+|++|+++ .+|.+..+
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L--------------------------------------------- 594 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTN--------------------------------------------- 594 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTT---------------------------------------------
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCC---------------------------------------------
Confidence 7888 8999999999999999887 33333322
Q ss_pred CCccccccccCcccEEEccCCCCCccCCccccCCCC-CCEEEcccCcccccCChhhhcCCC--CcEEEccccccccccCc
Q 042075 369 LLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVK-LLRLEMWNNRLSGTIPPAIGELQN--LRELRLQENRFLGNIPP 445 (1033)
Q Consensus 369 ~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~ 445 (1033)
++|+.|+|++|+++ .+|..+.++++ |++|+|++|+++ .+|..+..++. |+.|+|++|++++.+|.
T Consensus 595 ----------~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 595 ----------VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp ----------SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred ----------CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 45666777777776 66777888887 888888888888 67777776654 88888888888876664
Q ss_pred cc---ccc---eeceeeccccccCCCCCCc-cCCCCcccEEecCCCccCCCCCccccCchh-------HHhhhhccCccc
Q 042075 446 SI---GNL---KLFNLQLSYNFLQGSIPSS-LGQSETLTIIDLSNNNLTGTIPPQLLGLSS-------LLIVLELSRNQL 511 (1033)
Q Consensus 446 ~~---~~l---~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~-------ll~~L~ls~N~l 511 (1033)
.. ..+ .|+.|+|++|.++ .+|.. +..+++|+.|+|++|+|+ .+|..++.... .|+.|+|++|+|
T Consensus 663 l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L 740 (876)
T 4ecn_A 663 ISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKL 740 (876)
T ss_dssp CSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCC
T ss_pred chhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCC
Confidence 33 222 3889999999998 45554 458899999999999999 88888776541 349999999999
Q ss_pred cCCcCCccc--cccccceEEccccccccccCcccccccccceeeccc------ccccCcccccccCcccCCccccccccc
Q 042075 512 TGPIPNEVG--NLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQG------NFLQGPIPSSLSSLRGLSVLDLSQNNL 583 (1033)
Q Consensus 512 ~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l 583 (1033)
+ .+|..+. .+++|+.|+|++|+|++ +|..++++++|+.|+|++ |++.+.+|..+.++++|+.|+|++|+|
T Consensus 741 ~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 741 T-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp C-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred c-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 9 7898887 99999999999999997 899999999999999976 889999999999999999999999999
Q ss_pred cccCCcccccccccceeecCCCcCcccCCC
Q 042075 584 SGKIPEFLVGFQLLEYLNLSNNDFEGMVPT 613 (1033)
Q Consensus 584 ~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 613 (1033)
+.+|..+. ++|+.|+|++|++....+.
T Consensus 819 -~~Ip~~l~--~~L~~LdLs~N~l~~i~~~ 845 (876)
T 4ecn_A 819 -RKVDEKLT--PQLYILDIADNPNISIDVT 845 (876)
T ss_dssp -CBCCSCCC--SSSCEEECCSCTTCEEECG
T ss_pred -CccCHhhc--CCCCEEECCCCCCCccChH
Confidence 69999876 6999999999999865543
No 32
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-48 Score=427.95 Aligned_cols=281 Identities=22% Similarity=0.289 Sum_probs=203.4
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeE
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 790 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 790 (1033)
++|.+.++||+|+||+||+|+++ |+.||||+++..... ...+..|+..+.+++|||||+++++|.+.. ......|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 45788899999999999999984 889999999754322 123345666667889999999999985432 11235799
Q ss_pred EEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhC-----CCCCcEeccCCCCCeEecCCCcE
Q 042075 791 VFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHD-----CQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 791 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
|||||++|+|.++++. ..+++.++.+++.|+++||+|||++ +.++||||||||+|||+++++++
T Consensus 79 V~Ey~~~gsL~~~l~~-----------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~ 147 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred EecCCCCCcHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCE
Confidence 9999999999999953 3589999999999999999999976 25689999999999999999999
Q ss_pred EEeecccceecCCCCcc--ccccccccccccccccccCCC------CCCcccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 042075 866 HVGDFGLATFLPLSHAQ--TSSIFAKGSIGYIAPEYGLGS------EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN 937 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~ 937 (1033)
||+|||+|+........ .......||+.|||||++.+. .++.++|||||||++|||+||++||.........
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 99999999876543322 122234599999999998764 4778999999999999999999887543222221
Q ss_pred HHHHHhhhCC-cchhh-hcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 042075 938 LHNFAKTALP-DHVVD-IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQS 1015 (1033)
Q Consensus 938 ~~~~~~~~~~-~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1015 (1033)
+......... +.... +.+....+.. .......++++.+.+++.+||+.||++||||.||++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~rp~~-------------p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNI-------------PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCC-------------CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred chhcccccchHHHHHHHHhcccCCCCC-------------CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 1111000000 00000 0011110000 0001123466789999999999999999999999999999
Q ss_pred HHHH
Q 042075 1016 IKNI 1019 (1033)
Q Consensus 1016 i~~~ 1019 (1033)
+.+.
T Consensus 295 l~~~ 298 (303)
T 3hmm_A 295 LSQQ 298 (303)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8753
No 33
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-48 Score=417.31 Aligned_cols=248 Identities=23% Similarity=0.326 Sum_probs=189.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+++.+|++++++++|||||+++++ +..++
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~-----~~~~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-----IKSKD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEECC
Confidence 368999999999999999999999999999999997432 2335678999999999999999999999 45566
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||+ +|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+|||+++++++|
T Consensus 87 ~~~ivmEy~-~g~L~~~l~----------~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIV----------QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp EEEEEEECC-CEEHHHHHH----------HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEE
T ss_pred EEEEEEeCC-CCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEE
Confidence 899999999 689999984 345699999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||+|+......... ..+||+.|||||++.+..| +.++||||+||++|||+||+.||+.. ......+..
T Consensus 153 l~DFGla~~~~~~~~~~---~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~i 224 (275)
T 3hyh_A 153 IADFGLSNIMTDGNFLK---TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNI 224 (275)
T ss_dssp ECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH
T ss_pred EeecCCCeecCCCCccC---CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHH
Confidence 99999998764433222 2459999999999998876 58999999999999999999999632 111111110
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... .. . .+...++++.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~--------~~-~-------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 225 SNG--------VY-T-------------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHT--------CC-C-------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HcC--------CC-C-------------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 000 00 0 001123558899999999999999999999874
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=459.06 Aligned_cols=451 Identities=21% Similarity=0.224 Sum_probs=364.7
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 190 (1033)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999999 6888776 89999999999999877789999999999999999999888999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCCC-cCCccccccCCCCcccccccccCCCCcccccCCCce--eEEeccCccc--c
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLDG-SIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSI--TVFDAGINQI--Q 265 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~ls~N~l--~ 265 (1033)
+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|+|++|++++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 56665 79999999999999997 478999999999999999999986 455666666 8888888888 6
Q ss_pred CccCccccccccccceeeecccccCCCCCc-cCcCCCCcccccccccc-------ccCcCcchhhhccccceeeecCcCC
Q 042075 266 GVIPLDIGFTLQNLQFFSVGRNQLTGAIPP-AISNASNLEVFQVNSNK-------LTGEVPYLEKLQRLSHFVITRNSLG 337 (1033)
Q Consensus 266 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~~~~~~l~~l~~L~~L~l~~N~l~ 337 (1033)
+..|..+..--.+...+++++|++.+.++. .+.++++|+.|++++|. +.+.++.+..++
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~------------- 220 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNP------------- 220 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCT-------------
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhcccc-------------
Confidence 666654432111344567777777765554 56677788888888776 443333333333
Q ss_pred CCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCcccc---CCCCCCEEEcccCc
Q 042075 338 SGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFG---KFVKLLRLEMWNNR 414 (1033)
Q Consensus 338 ~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~---~l~~L~~L~L~~N~ 414 (1033)
+|+.|++++|.+++..+..+. ..++|++|++++|+
T Consensus 221 ------------------------------------------~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 258 (520)
T 2z7x_B 221 ------------------------------------------KLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVK 258 (520)
T ss_dssp ------------------------------------------TCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEE
T ss_pred ------------------------------------------chhhccccccccCHHHHHHHHHHhhhCcccEEEeeccc
Confidence 344444444444432222111 24689999999999
Q ss_pred ccccCChhh-----hcCCCCcEEEccccccccccC-cccccc----eeceeeccccccCCCCCCccCCCCcccEEecCCC
Q 042075 415 LSGTIPPAI-----GELQNLRELRLQENRFLGNIP-PSIGNL----KLFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNN 484 (1033)
Q Consensus 415 l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 484 (1033)
++|.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .++.|++++|.+.+.. .+..+++|++|++++|
T Consensus 259 l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 259 LQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNN 334 (520)
T ss_dssp EESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSS
T ss_pred ccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECC
Confidence 999999998 9999999999999999 566 455443 4999999999987432 1268899999999999
Q ss_pred ccCCCCCccccCchhHHhhhhccCccccC--CcCCccccccccceEEccccccccccCc-ccccccccceeecccccccC
Q 042075 485 NLTGTIPPQLLGLSSLLIVLELSRNQLTG--PIPNEVGNLKNLEMLNVFENKLRGEIPR-TLGSCIKLELLQMQGNFLQG 561 (1033)
Q Consensus 485 ~l~~~~p~~~~~~~~ll~~L~ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 561 (1033)
++++.+|..+..+.++ +.|++++|++++ .+|..++.+++|+.|++++|++++.+|. .+..+++|++|++++|++++
T Consensus 335 ~l~~~~~~~~~~l~~L-~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 335 LLTDTVFENCGHLTEL-ETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp CCCTTTTTTCCCCSSC-CEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred ccChhhhhhhccCCCC-CEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 9998899999888887 999999999997 5667899999999999999999986776 48899999999999999998
Q ss_pred cccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCc--ccccccccccccccccccCC
Q 042075 562 PIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTE--GVFRNASITSVLGNLKLCGG 634 (1033)
Q Consensus 562 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~--~~~~~~~~~~~~~n~~lcg~ 634 (1033)
.+|..+. ++|+.|||++|+|+ .+|..+..+++|++|+|++|+|++ +|.. ..+..+....+.+|+..|..
T Consensus 414 ~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 414 TIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp GGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred chhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccC
Confidence 8888775 79999999999999 889988899999999999999995 5543 34556666777888877753
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.5e-48 Score=419.28 Aligned_cols=243 Identities=23% Similarity=0.242 Sum_probs=189.7
Q ss_pred CCCCccceecccCceeEEEEEeC---CCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILD---EGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||++++++ +++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----QTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----EET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence 57999999999999999999873 467899999997432 22335688999999999999999999994 456
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..|+||||++||+|.++++ ....+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~----------~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLS----------KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCE
Confidence 68999999999999999994 345699999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.....
T Consensus 166 Kl~DFGla~~~~~~~~~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i 238 (304)
T 3ubd_A 166 KLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----RKETMTMI 238 (304)
T ss_dssp EEESSEEEEC-----CC--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH
T ss_pred EecccccceeccCCCcc--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----HHHHHHHH
Confidence 99999999865433222 223459999999999999999999999999999999999999996321 11111110
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM 1006 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 1006 (1033)
... .. ..+..+++++.+++.+||+.||++|||+
T Consensus 239 ~~~--------~~--------------------~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 239 LKA--------KL--------------------GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHC--------CC--------------------CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred HcC--------CC--------------------CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 000 00 0011134568999999999999999985
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.6e-47 Score=455.43 Aligned_cols=460 Identities=19% Similarity=0.210 Sum_probs=349.0
Q ss_pred EEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccc
Q 042075 87 TILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSN 166 (1033)
Q Consensus 87 ~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 166 (1033)
..+|++++++++ +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 578889999985 776554 78999999999999877789999999999999999999888899999999999999999
Q ss_pred cccCCCCCCcccccccceeeecccccCC-CCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCC--Cccccccccc--C
Q 042075 167 ELVGKIPSELGSLSKIEYFSVSYNNLTG-SIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNL--VNLTMAQNRL--S 241 (1033)
Q Consensus 167 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 241 (1033)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..|..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeeccccccc
Confidence 998 67776 78999999999999987 346789999999999999999885 345666666 9999999999 8
Q ss_pred CCCcccccCCC-ceeEEeccCccccCccCccccccccccceeeeccccc-----CCCCCccCcCCCCccccccccccccC
Q 042075 242 GTIPSSIFNIS-SITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQL-----TGAIPPAISNASNLEVFQVNSNKLTG 315 (1033)
Q Consensus 242 ~~~p~~l~~l~-~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l-----~~~~p~~~~~l~~L~~L~Ls~N~l~~ 315 (1033)
+..|..+..+. ....++++.|.+.+.++...+..+++|+.|++++|+. .+ .+..+..+++|+.|+++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88888887765 2235577788777777766666677777777777642 11 11223444444444444444432
Q ss_pred cCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccC
Q 042075 316 EVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNI 395 (1033)
Q Consensus 316 ~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~ 395 (1033)
.. +.+ ++.... .++|++|++++|.++|.+
T Consensus 264 ~~------------------------------------------------~~~-~~~~~~--~~~L~~L~l~~n~l~~~i 292 (562)
T 3a79_B 264 KC------------------------------------------------SVK-LFQFFW--PRPVEYLNIYNLTITERI 292 (562)
T ss_dssp HH------------------------------------------------HHH-HHHHHT--TSSEEEEEEEEEEECSCC
T ss_pred HH------------------------------------------------HHH-HHHhhh--cccccEEEEeccEeeccc
Confidence 10 000 000010 135667777777777666
Q ss_pred Cccc-----cCCCCCCEEEcccCcccccCC-hhhhcC---CCCcEEEccccccccccCcccccce-eceeeccccccCCC
Q 042075 396 PAAF-----GKFVKLLRLEMWNNRLSGTIP-PAIGEL---QNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGS 465 (1033)
Q Consensus 396 p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~ 465 (1033)
|..+ .+++.|+.++++.|.+ .+| ..+..+ .+|+.|++++|.+.... ....++ |++|++++|.+++.
T Consensus 293 p~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 368 (562)
T 3a79_B 293 DREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDS 368 (562)
T ss_dssp CCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTT
T ss_pred cchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccc
Confidence 6666 6677777777777777 344 333333 67888888888875322 114555 88888888888888
Q ss_pred CCCccCCCCcccEEecCCCccCC--CCCccccCchhHHhhhhccCccccCCcCC-ccccccccceEEccccccccccCcc
Q 042075 466 IPSSLGQSETLTIIDLSNNNLTG--TIPPQLLGLSSLLIVLELSRNQLTGPIPN-EVGNLKNLEMLNVFENKLRGEIPRT 542 (1033)
Q Consensus 466 ~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~ll~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 542 (1033)
+|..+.++++|++|+|++|++++ .+|..+..+.++ +.|++++|++++.+|. .+..+++|+.|+|++|++++.+|..
T Consensus 369 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 447 (562)
T 3a79_B 369 VFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL-ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRC 447 (562)
T ss_dssp TTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTC-CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSS
T ss_pred hhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCC-CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhh
Confidence 88888888899999999998884 233456666666 8889999999875555 5888999999999999999888877
Q ss_pred cccccccceeecccccccCcccccccCcccCCccccccccccccCCcc-cccccccceeecCCCcCcccCCCccc
Q 042075 543 LGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEF-LVGFQLLEYLNLSNNDFEGMVPTEGV 616 (1033)
Q Consensus 543 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~~~ 616 (1033)
+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|++|++++|+++|.+|..+.
T Consensus 448 l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 448 LP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp CC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred hc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 65 79999999999999 78888889999999999999999 56665 89999999999999999998875433
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.9e-47 Score=415.53 Aligned_cols=257 Identities=21% Similarity=0.318 Sum_probs=190.1
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-------
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY------- 782 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------- 782 (1033)
++|++.+.||+|+||+||+|+++.+++.||||+++... ....+++.+|++++++++|||||++++++.+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999999999999999997543 3345678999999999999999999999754321
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
..+.+.|+||||+++|+|.++++... .....++..++.|+.||+.||+|||++ +|+||||||+|||++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~ 154 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-------TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMD 154 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-------SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-------CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCC
Confidence 12335799999999999999996421 223356677889999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCccc----------cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccc
Q 042075 863 MIAHVGDFGLATFLPLSHAQT----------SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMF 932 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~ 932 (1033)
+.+||+|||+|+......... .....+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~ 231 (299)
T 4g31_A 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231 (299)
T ss_dssp CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence 999999999998765432211 1123459999999999999999999999999999999996 764211
Q ss_pred cCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 933 EGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
+ ....... +.+.. .++...+..+...+++.+||+.||++|||+.|+++
T Consensus 232 ~----~~~~~~~--------~~~~~-------------------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 E----RVRTLTD--------VRNLK-------------------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp H----HHHHHHH--------HHTTC-------------------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H----HHHHHHH--------HhcCC-------------------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 0000000 00000 00111223445678999999999999999999987
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.4e-46 Score=456.87 Aligned_cols=530 Identities=20% Similarity=0.166 Sum_probs=421.3
Q ss_pred EEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccc
Q 042075 89 LDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNEL 168 (1033)
Q Consensus 89 l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 168 (1033)
++=++.+++ .+|+.+- +.+++|||++|+|++..|.+|.++++|++|||++|+|++..|..|.+|++|++|+|++|+|
T Consensus 36 ~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 455566776 4665442 4789999999999987778999999999999999999987788899999999999999999
Q ss_pred cCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCC-cCCccccccCCCCcccccccccCCCCccc
Q 042075 169 VGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDG-SIPDTFGWLKNLVNLTMAQNRLSGTIPSS 247 (1033)
Q Consensus 169 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 247 (1033)
++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++ ..|..++.+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 97777789999999999999999998878889999999999999999986 46888999999999999999999888888
Q ss_pred ccCCCce----eEEeccCccccCccCccccccccccceeeecccccCCC-CCccCcCCCCccccccccccccCc------
Q 042075 248 IFNISSI----TVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGA-IPPAISNASNLEVFQVNSNKLTGE------ 316 (1033)
Q Consensus 248 l~~l~~L----~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~------ 316 (1033)
+..+.++ ..++++.|.++. ++...+ ....++.+++.+|..... .+..+..+..++...+..+.....
T Consensus 193 l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~ 270 (635)
T 4g8a_A 193 LRVLHQMPLLNLSLDLSLNPMNF-IQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 270 (635)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCE-ECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred ccchhhhhhhhhhhhcccCcccc-cCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccc
Confidence 8766543 478999999984 444444 345678889988876532 334566777777776655443321
Q ss_pred -CcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccC
Q 042075 317 -VPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNI 395 (1033)
Q Consensus 317 -~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~ 395 (1033)
...+..+..+....+..+........ ....+.....+..+.+..+.+....+. .....++.|++.+|.+.+..
T Consensus 271 ~~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~~~~~~~l~~l~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~~~ 344 (635)
T 4g8a_A 271 DKSALEGLCNLTIEEFRLAYLDYYLDG---IIDLFNCLTNVSSFSLVSVTIERVKDF---SYNFGWQHLELVNCKFGQFP 344 (635)
T ss_dssp CTTTTGGGGGSEEEEEEEECCCSCEEE---CTTTTGGGTTCSEEEEESCEEEECGGG---GSCCCCSEEEEESCEESSCC
T ss_pred cccccccccchhhhhhhhhhhcccccc---hhhhhhhhccccccccccccccccccc---ccchhhhhhhcccccccCcC
Confidence 12345555566555555443321111 122344566777777777776654332 22357999999999998665
Q ss_pred CccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEcccccccc--ccCcccccce-eceeeccccccCCCCCCccCC
Q 042075 396 PAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLG--NIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQ 472 (1033)
Q Consensus 396 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~ 472 (1033)
+. .+..|+.++++.|.+... .....+++|+.|++++|.+.. ..+..+..+. ++.|+++.|.+.. .+..+..
T Consensus 345 ~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~ 418 (635)
T 4g8a_A 345 TL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLG 418 (635)
T ss_dssp CC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTT
T ss_pred cc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccc
Confidence 53 467789999999998743 345679999999999999864 3455555554 9999999999884 5667889
Q ss_pred CCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcccccc-ccccCcccccccccce
Q 042075 473 SETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKL-RGEIPRTLGSCIKLEL 551 (1033)
Q Consensus 473 l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~ 551 (1033)
+++|+.+++++|+.....+...+.....++.++++.|.+++..|..+..+++|+.|+|++|++ .+.+|..|..+++|++
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 999999999999887666655444333448999999999999999999999999999999985 4567899999999999
Q ss_pred eecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCcc-cc-cccccccccccc
Q 042075 552 LQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEG-VF-RNASITSVLGNL 629 (1033)
Q Consensus 552 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~-~~~~~~~~~~n~ 629 (1033)
|+|++|+|++.+|.+|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++.+|..- .+ ..+....+.+|+
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 9999999999999999999999999999999999999999999999999999999999988752 22 456677788999
Q ss_pred cccCCc
Q 042075 630 KLCGGT 635 (1033)
Q Consensus 630 ~lcg~~ 635 (1033)
.-|...
T Consensus 579 ~~C~C~ 584 (635)
T 4g8a_A 579 FACTCE 584 (635)
T ss_dssp BCCSGG
T ss_pred CcccCC
Confidence 988643
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.5e-46 Score=448.80 Aligned_cols=441 Identities=18% Similarity=0.219 Sum_probs=311.8
Q ss_pred CeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEc
Q 042075 84 QRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRL 163 (1033)
Q Consensus 84 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 163 (1033)
.+++.|+|+++++++..+..++++++|++|+|++|++++..|..|..+++|++|||++|.|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 46899999999999888889999999999999999999988999999999999999999999 78877 8999999999
Q ss_pred ccccccC-CCCCCcccccccceeeecccccCCCCCCCCCCCCCC--cEEEcccCcC--CCcCCccccccC--CCCccccc
Q 042075 164 SSNELVG-KIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSI--SFLFLSRNNL--DGSIPDTFGWLK--NLVNLTMA 236 (1033)
Q Consensus 164 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~--~L~~L~L~ 236 (1033)
++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|++ ++..|..|..+. .| .++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~ 204 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFH 204 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEEC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEec
Confidence 9999996 4568999999999999999999863 45666666 9999999999 889999998865 33 66889
Q ss_pred ccccCCCCcc-cccCCCceeEEeccCcc-----ccCccCccccccccccceeeecccccCCCC----CccCcCCCCcccc
Q 042075 237 QNRLSGTIPS-SIFNISSITVFDAGINQ-----IQGVIPLDIGFTLQNLQFFSVGRNQLTGAI----PPAISNASNLEVF 306 (1033)
Q Consensus 237 ~N~l~~~~p~-~l~~l~~L~~L~ls~N~-----l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L 306 (1033)
+|.+.+.++. .+.++++|+.+++++|. +.+.++ .+..+++|+.|+++++.+++.. +..+ ..++|++|
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~--~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L 281 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLS--ELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYL 281 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHH--HHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHH--HHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEE
Confidence 9999887665 55688999999999995 222222 2346788888888888776321 1111 22367777
Q ss_pred ccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCc-ccccccc--CcccE
Q 042075 307 QVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLP-ACISNFS--TTLEV 383 (1033)
Q Consensus 307 ~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip-~~~~~~~--~~L~~ 383 (1033)
++++|+++|..|.-. + -....+++.|+.++++.+.+ .+| ..+.... .+|+.
T Consensus 282 ~l~~n~l~~~ip~~~----------------------~--~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 282 NIYNLTITERIDREE----------------------F--TYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEEEEEECSCCCCCC----------------------C--CCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSE
T ss_pred EEeccEeeccccchh----------------------h--hcccccchheehhhccccee--ecChhhhhhhhccCcceE
Confidence 777777775544200 0 00124455555555555555 333 1111110 23555
Q ss_pred EEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccC
Q 042075 384 LLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQ 463 (1033)
Q Consensus 384 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~ 463 (1033)
|++++|.+.... ....+++|++|++++|++++.+|..+..+++|+.|+|++|++++..
T Consensus 336 L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-------------------- 393 (562)
T 3a79_B 336 LSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF-------------------- 393 (562)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT--------------------
T ss_pred EEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc--------------------
Confidence 555555553211 1134455555555555555545555555555555555555554311
Q ss_pred CCCCCccCCCCcccEEecCCCccCCCCCcccc-CchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcc
Q 042075 464 GSIPSSLGQSETLTIIDLSNNNLTGTIPPQLL-GLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRT 542 (1033)
Q Consensus 464 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 542 (1033)
.+|..+.++++|++|++++|++++.+|...+ .+.++ +.|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..
T Consensus 394 -~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 394 -KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI-LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp -HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC-CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred -cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC-CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 1234455666666666666666654555433 33333 6666666666665665554 68999999999998 78887
Q ss_pred cccccccceeecccccccCccccc-ccCcccCCccccccccccccCC
Q 042075 543 LGSCIKLELLQMQGNFLQGPIPSS-LSSLRGLSVLDLSQNNLSGKIP 588 (1033)
Q Consensus 543 ~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 588 (1033)
+..+++|++|+|++|+|+ .+|.. +..+++|+.|+|++|++++..|
T Consensus 469 ~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 469 VTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 779999999999999999 56665 8999999999999999997655
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=418.74 Aligned_cols=287 Identities=21% Similarity=0.194 Sum_probs=205.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccc-cccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGV-DYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~~ 786 (1033)
.++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+++.+|+++|++++|||||++++++... .+...+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999999999999999997432 33456788999999999999999999987543 234556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+|||||+ |+|.+++. ....+++.++..++.||+.||+|||++ |||||||||+|||++.++.+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~----------~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH----------SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT----------SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEE
T ss_pred EEEEEEeCCC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEE
Confidence 8899999995 68999994 345799999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCc--cccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 867 VGDFGLATFLPLSHA--QTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
|+|||+|+.+..... .......+||+.|||||++.+. .++.++||||+||++|||++|++||...... ..+.....
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~ 277 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMM 277 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHH
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence 999999987643321 2222335699999999998875 5689999999999999999999999632111 11111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....... +.....................+..-........+++.+++.+||+.||++|||++|+++.
T Consensus 278 ~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 278 VLGTPSP-AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHCCCCG-GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hcCCCCh-HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 1111100 0000000000000000000000000000001124568899999999999999999999874
No 41
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.9e-45 Score=405.43 Aligned_cols=295 Identities=28% Similarity=0.456 Sum_probs=278.8
Q ss_pred cCCChhhHHHHHHHHHhcccCCCCCCCCCCCCCCCcc--eeeeEecCCC-CCeEEEEEcCCCCCCc--ccccccCCCCCC
Q 042075 36 VAGNETDRLALLEFKSKITHDPLGVFGSWNESIHFCQ--WHGVTCSRRQ-HQRVTILDLKSLKLAG--YISAHVGNLSFL 110 (1033)
Q Consensus 36 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~W~~~~~~c~--w~gv~C~~~~-~~~v~~l~l~~~~l~g--~~~~~~~~l~~L 110 (1033)
+.|.++|++||++||+++ .||. .+++|..+.+||. |.||+|+..+ .++|+.|+|++++++| .+|+.++++++|
T Consensus 1 ~~c~~~~~~aL~~~k~~~-~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDL-GNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CCSCHHHHHHHHHHHHHT-TCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCCHHHHHHHHHHHHhc-CCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 369999999999999999 4775 7899988889998 9999998642 2689999999999999 899999999999
Q ss_pred CEEEecC-CCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecc
Q 042075 111 KVLDLHN-NSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSY 189 (1033)
Q Consensus 111 ~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 189 (1033)
++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|..|..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCC-CCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCcc
Q 042075 190 NNLTGSIPPSFGNLS-SISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVI 268 (1033)
Q Consensus 190 N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 268 (1033)
|++++.+|..+.+++ +|++|+|++|++++.+|..|..++ |++|+|++|++++.+|..+..+++|+.|++++|.+++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 999999999999998 999999999999999999999998 999999999999999999999999999999999999877
Q ss_pred CccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCc
Q 042075 269 PLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNS 335 (1033)
Q Consensus 269 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~ 335 (1033)
|. +..+++|++|+|++|++++.+|..+..+++|++|++++|++++.+|....+++|+.+++++|.
T Consensus 238 ~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 238 GK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp GG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred Cc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 76 456899999999999999999999999999999999999999999988899999999999886
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.1e-44 Score=407.33 Aligned_cols=200 Identities=24% Similarity=0.320 Sum_probs=169.6
Q ss_pred HhhCCCCccceecccCceeEEEEEeC---CCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeecccccc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILD---EGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 783 (1033)
...++|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+++++++ +||||++++++ +.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~-----~~ 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYC-----FR 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEE-----EE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEE-----EE
Confidence 34678999999999999999999874 467899999986543 335678999999998 79999999998 45
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC-
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE- 862 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~- 862 (1033)
.++..|+||||+++|+|.++++ .+++.++..++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~ 154 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRL 154 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTT
T ss_pred ECCEEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCC
Confidence 5668999999999999999983 378999999999999999999999 99999999999999876
Q ss_pred CcEEEeecccceecCCCCcc--------------------------ccccccccccccccccccCCC-CCCcccchHHHH
Q 042075 863 MIAHVGDFGLATFLPLSHAQ--------------------------TSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYG 915 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG 915 (1033)
+.+||+|||+|+........ ......+||+.|||||++.+. .|+.++||||+|
T Consensus 155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 79999999999865433211 011224599999999998875 489999999999
Q ss_pred HHHHHHHhCCCCCCc
Q 042075 916 ILLLELVTRKKPTDI 930 (1033)
Q Consensus 916 ~vl~elltg~~p~~~ 930 (1033)
|++|||++|+.||..
T Consensus 235 ~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHHTCSSSSC
T ss_pred HHHHHHHHCCCCCCC
Confidence 999999999999853
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6e-44 Score=416.45 Aligned_cols=392 Identities=24% Similarity=0.311 Sum_probs=193.0
Q ss_pred ccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCC-------------cEEEccccc
Q 042075 101 SAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNL-------------IRVRLSSNE 167 (1033)
Q Consensus 101 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~ 167 (1033)
.|.-...++|++|++++|++ |.+|++|+++++|++|++++|.++|.+|..++++++| ++|++++|.
T Consensus 4 ~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 4 NPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 34444567888888888888 6888888888888888888888888888888887765 777777777
Q ss_pred ccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCccc
Q 042075 168 LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSS 247 (1033)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 247 (1033)
+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .
T Consensus 83 l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 83 LSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp CSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred ccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 764 4442 2567777777777775 5543 3567777777777774 3321 1567777777777775 56 4
Q ss_pred ccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhcccc
Q 042075 248 IFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLS 327 (1033)
Q Consensus 248 l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~ 327 (1033)
+.++++|++|++++|++++ +|.. ..+|++|++++|++++ +| .+.++++|++|++++|++++.+...
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~------- 214 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP------- 214 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC-------
T ss_pred cCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc-------
Confidence 7777777777777777764 4432 2467777777777765 44 4666777777777776666432111
Q ss_pred ceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCE
Q 042075 328 HFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLR 407 (1033)
Q Consensus 328 ~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 407 (1033)
++|+.|++++|+++ .+| .++++++|++
T Consensus 215 ---------------------------------------------------~~L~~L~l~~n~l~-~lp-~~~~l~~L~~ 241 (454)
T 1jl5_A 215 ---------------------------------------------------LSLESIVAGNNILE-ELP-ELQNLPFLTT 241 (454)
T ss_dssp ---------------------------------------------------TTCCEEECCSSCCS-SCC-CCTTCTTCCE
T ss_pred ---------------------------------------------------CcccEEECcCCcCC-ccc-ccCCCCCCCE
Confidence 24455555555554 333 2555555555
Q ss_pred EEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCCCCcccEEecCCCccC
Q 042075 408 LEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLT 487 (1033)
Q Consensus 408 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 487 (1033)
|++++|++++ +|.. +++|+.|++++|++++ +|..+ -.|++|++++|.+++. |.. .++|++|++++|+++
T Consensus 242 L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~--~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~ 310 (454)
T 1jl5_A 242 IYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPELP--QSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIR 310 (454)
T ss_dssp EECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCS
T ss_pred EECCCCcCCc-cccc---ccccCEEECCCCcccc-cCccc--CcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCC
Confidence 5555555553 2321 2455555555555553 33322 1245555555555531 110 135555555555555
Q ss_pred CCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeecccccccC--cccc
Q 042075 488 GTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQG--PIPS 565 (1033)
Q Consensus 488 ~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 565 (1033)
+ ++ .....|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.
T Consensus 311 ~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 311 S-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp E-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred c-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChH
Confidence 2 22 111122555555555553 4432 355666666666665 3444 34556666666666665 4555
Q ss_pred cccCcccCCccccccccccccCCcccccccccceeecCCCcCcc
Q 042075 566 SLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEG 609 (1033)
Q Consensus 566 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 609 (1033)
+++.+ +.|++.|.+|.. +++|++|++++|+++|
T Consensus 378 ~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 378 SVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLRE 410 (454)
T ss_dssp TCCEE--------ECCC---------------------------
T ss_pred HHHhh--------hhcccccccccc---cCcCCEEECCCCcCCc
Confidence 44432 234444444442 2445555555555554
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.7e-43 Score=413.15 Aligned_cols=393 Identities=18% Similarity=0.205 Sum_probs=248.1
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCC-CCCcccccccceeeeccc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKI-PSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N 190 (1033)
.++.++++++ .+|. +. ++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 4566666665 4554 22 56666666666666655666666666666666666665444 345666666666666666
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCCCcCCcc--ccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCcc
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDT--FGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVI 268 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 268 (1033)
++++..|..|+++++|++|+|++|++++..|.. |+.+++|++|+|++|++++..
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~------------------------ 145 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQ------------------------ 145 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCC------------------------
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccC------------------------
Confidence 666555666666666666666666665533332 555555555555555555443
Q ss_pred CccccccccccceeeecccccCCCCCccCcCC--CCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchh
Q 042075 269 PLDIGFTLQNLQFFSVGRNQLTGAIPPAISNA--SNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNF 346 (1033)
Q Consensus 269 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 346 (1033)
|..++..+++|++|++++|++++..|..+..+ .+|+.|++++|.+++..+....
T Consensus 146 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~------------------------ 201 (455)
T 3v47_A 146 PASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG------------------------ 201 (455)
T ss_dssp CCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT------------------------
T ss_pred cccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcc------------------------
Confidence 43333345555555555555555555555544 4555566655555533221000
Q ss_pred hcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcC
Q 042075 347 LCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGEL 426 (1033)
Q Consensus 347 l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 426 (1033)
......+..+++|++|++++|++++..|..+..+
T Consensus 202 ----------------------------------------------~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~ 235 (455)
T 3v47_A 202 ----------------------------------------------WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDA 235 (455)
T ss_dssp ----------------------------------------------HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccceeeeEecCCCcccccchhhhhcc
Confidence 0000112233445555555555554444444433
Q ss_pred ---CCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCC--CCcccEEecCCCccCCCCCccccCchhHH
Q 042075 427 ---QNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQ--SETLTIIDLSNNNLTGTIPPQLLGLSSLL 501 (1033)
Q Consensus 427 ---~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll 501 (1033)
++|+.|++++|.+.+.. +..+.+.+..+..+.. .++|++|++++|++++.+|..+..+.++
T Consensus 236 ~~~~~L~~L~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L- 301 (455)
T 3v47_A 236 IAGTKIQSLILSNSYNMGSS-------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDL- 301 (455)
T ss_dssp TTTCCEEEEECTTCTTTSCC-------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTC-
T ss_pred ccccceeeEeeccccccccc-------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCC-
Confidence 55556666555544221 1111222222222222 2456666666666665556556555555
Q ss_pred hhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccc
Q 042075 502 IVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQN 581 (1033)
Q Consensus 502 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 581 (1033)
+.|++++|++++..|..|+.+++|+.|+|++|++++..|..|+++++|++|+|++|++++..|.+|..+++|++|+|++|
T Consensus 302 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 381 (455)
T 3v47_A 302 EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN 381 (455)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC
Confidence 66677777777667778889999999999999999888899999999999999999999888999999999999999999
Q ss_pred cccccCCcccccccccceeecCCCcCcccCCCccc
Q 042075 582 NLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGV 616 (1033)
Q Consensus 582 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 616 (1033)
+|++..+..+..+++|++|++++|+++|.+|....
T Consensus 382 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 416 (455)
T 3v47_A 382 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 416 (455)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred ccccCCHhHhccCCcccEEEccCCCcccCCCcchH
Confidence 99987777889999999999999999999996433
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-43 Score=414.38 Aligned_cols=251 Identities=20% Similarity=0.247 Sum_probs=198.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHH---HHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSF---IAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|++.++||+|+||+||+|+++.+|+.||||++++.. ....... ..++.+++.++|||||+++++ ++
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~ 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FH 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EE
Confidence 457999999999999999999999999999999997421 1112223 344667777899999999999 55
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
+++..|+||||++||+|.+++. ....+++..+..++.||+.||+|||++ |||||||||+|||++++|
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~----------~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLS----------QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHG 329 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTS
T ss_pred ECCEEEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCC
Confidence 6678999999999999999994 345699999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~ 942 (1033)
++||+|||+|+........ ..+||+.|||||++.+ ..|+.++||||+||++|||++|++||......+ .....
T Consensus 330 ~vKL~DFGlA~~~~~~~~~----t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~ 403 (689)
T 3v5w_A 330 HVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEID 403 (689)
T ss_dssp CEEECCCTTCEECSSCCCC----SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHH
T ss_pred CEEecccceeeecCCCCCC----CccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHH
Confidence 9999999999977544322 2459999999999965 579999999999999999999999996422111 11111
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD-----MTNVVHQ 1012 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 1012 (1033)
....... . ..+...++++.+++.+||+.||++|++ ++||+++
T Consensus 404 ~~i~~~~--------~--------------------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 404 RMTLTMA--------V--------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHCC--------C--------------------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HhhcCCC--------C--------------------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1110000 0 001112456899999999999999998 6777653
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.7e-43 Score=415.39 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=207.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||+||+|+++.+|+.||+|+++.......+.+.+|+++|++++|||||+++++ +..++..|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----~~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE-----EECSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE-----EEECCEEE
Confidence 4689999999999999999999999999999999987666666788999999999999999999999 45667899
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC--CcEEE
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE--MIAHV 867 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~--~~~kL 867 (1033)
+|||||+||+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 231 iv~E~~~gg~L~~~i~~---------~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl 298 (573)
T 3uto_A 231 MIYEFMSGGELFEKVAD---------EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 298 (573)
T ss_dssp EEEECCCCCBHHHHHTC---------TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEeecCCCcHHHHHHH---------hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEE
Confidence 99999999999999853 345689999999999999999999999 99999999999999854 79999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+|+.+....... ..+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ..+.........
T Consensus 299 ~DFG~a~~~~~~~~~~---~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~~~i~~~~~~ 374 (573)
T 3uto_A 299 IDFGLTAHLDPKQSVK---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLRNVKSCDWN 374 (573)
T ss_dssp CCCSSCEECCTTSEEE---EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCC
T ss_pred eeccceeEccCCCcee---eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHhCCCC
Confidence 9999999876543322 245999999999999999999999999999999999999998632111 001111100000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. .. .....+++++.+++.+||+.||++|||+.|++++
T Consensus 375 --~----------~~----------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 375 --M----------DD----------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --C----------CS----------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --C----------Cc----------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00 0001123557899999999999999999999873
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-42 Score=407.02 Aligned_cols=387 Identities=20% Similarity=0.271 Sum_probs=270.9
Q ss_pred CCcceee--eEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCC
Q 042075 69 HFCQWHG--VTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGG 146 (1033)
Q Consensus 69 ~~c~w~g--v~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 146 (1033)
..|.|.+ |.|+.. +++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+
T Consensus 6 ~~c~~~~~~~~c~~~-------------~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~ 68 (455)
T 3v47_A 6 SECSVIGYNAICINR-------------GLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL 68 (455)
T ss_dssp -CCEEETTEEECCSS-------------CCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC
T ss_pred ceeEEEccccCcCCC-------------Ccc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc
Confidence 4577766 788654 232 3444 2 2789999999999998889999999999999999999986
Q ss_pred CC-CccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCC--CCCCCCCCcEEEcccCcCCCcCCcc
Q 042075 147 EI-PANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPP--SFGNLSSISFLFLSRNNLDGSIPDT 223 (1033)
Q Consensus 147 ~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~ 223 (1033)
.+ |..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++.+|. .|.++++|++|+|++|++++..|..
T Consensus 69 ~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (455)
T 3v47_A 69 VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG
T ss_pred eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc
Confidence 66 56789999999999999999988899999999999999999999975544 4899999999999999999887876
Q ss_pred -ccccCCCCcccccccccCCCCcccccCC--CceeEEeccCccccCccCcccc-------ccccccceeeecccccCCCC
Q 042075 224 -FGWLKNLVNLTMAQNRLSGTIPSSIFNI--SSITVFDAGINQIQGVIPLDIG-------FTLQNLQFFSVGRNQLTGAI 293 (1033)
Q Consensus 224 -~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~ls~N~l~~~~p~~~~-------~~l~~L~~L~L~~N~l~~~~ 293 (1033)
|..+++|++|++++|++++..|..+..+ .+|+.|++++|.+.+..+..+. ..+++|++|++++|++++..
T Consensus 149 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~ 228 (455)
T 3v47_A 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESM 228 (455)
T ss_dssp GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHH
T ss_pred ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccc
Confidence 8899999999999999998888888776 6888899998888854443221 23456777777777776666
Q ss_pred CccCcCC---CCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCC
Q 042075 294 PPAISNA---SNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLL 370 (1033)
Q Consensus 294 p~~~~~l---~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~i 370 (1033)
|..+..+ ++|+.|++++|.+.+...... .+ .+..
T Consensus 229 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-------------~~------------------------------~~~~ 265 (455)
T 3v47_A 229 AKRFFDAIAGTKIQSLILSNSYNMGSSFGHT-------------NF------------------------------KDPD 265 (455)
T ss_dssp HHHHHHHTTTCCEEEEECTTCTTTSCCTTCC-------------SS------------------------------CCCC
T ss_pred hhhhhccccccceeeEeeccccccccccchh-------------hh------------------------------ccCc
Confidence 6555443 566666666665543211100 00 0000
Q ss_pred ccccccc-cCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCccccc
Q 042075 371 PACISNF-STTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGN 449 (1033)
Q Consensus 371 p~~~~~~-~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 449 (1033)
+..+... .++|+.|++++|++++..|..|.++++|++|++++|++++..|..|..+++|++|+|++|++++..|..+..
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 0011100 135666777777776666666777777777777777776666666666677777777766666555555555
Q ss_pred ce-eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceE
Q 042075 450 LK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEML 528 (1033)
Q Consensus 450 l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L 528 (1033)
++ |++|+|++|++++..|..|..+++|++|+|++|+++ +..+..+..+++|+.|
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L 400 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-------------------------SVPDGIFDRLTSLQKI 400 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-------------------------CCCTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCccc-------------------------cCCHhHhccCCcccEE
Confidence 54 555555555555555555555555555555555554 3333445666777778
Q ss_pred EccccccccccC
Q 042075 529 NVFENKLRGEIP 540 (1033)
Q Consensus 529 ~Ls~N~l~~~~p 540 (1033)
++++|++++..|
T Consensus 401 ~l~~N~l~~~~~ 412 (455)
T 3v47_A 401 WLHTNPWDCSCP 412 (455)
T ss_dssp ECCSSCBCCCTT
T ss_pred EccCCCcccCCC
Confidence 888887776665
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.2e-42 Score=382.34 Aligned_cols=286 Identities=31% Similarity=0.481 Sum_probs=226.7
Q ss_pred CCHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccc
Q 042075 701 ISYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGV 780 (1033)
Q Consensus 701 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 780 (1033)
+++.++...+++|++.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||++++++|
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--- 104 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC--- 104 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC---
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence 445566678899999999999999999999976 6889999998876666678899999999999999999999995
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
..++..++||||+++|+|.+++.... .....+++.++..++.|++.||+|||++ +|+||||||+||+++
T Consensus 105 --~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~ 173 (321)
T 2qkw_B 105 --DERNEMILIYKYMENGNLKRHLYGSD------LPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLD 173 (321)
T ss_dssp --CCTTCCEEEEECCTTCBTGGGSSSSC------CCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEEC
T ss_pred --cCCCeEEEEEEcCCCCcHHHHHhccC------CCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEEC
Confidence 44568899999999999999996421 1234689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCC-ccHH
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGD-MNLH 939 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~-~~~~ 939 (1033)
+++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....
T Consensus 174 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~ 253 (321)
T 2qkw_B 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253 (321)
T ss_dssp TTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred CCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence 999999999999987543333222333458999999999988899999999999999999999999997543222 1222
Q ss_pred HHHhh-hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 042075 940 NFAKT-ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKN 1018 (1033)
Q Consensus 940 ~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 1018 (1033)
.+... .........+++... .....+++.++.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 254 EWAVESHNNGQLEQIVDPNLA------------------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHTHHHHTTTCCCSSSSSSCT------------------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhhccccccHHHhcChhhc------------------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 22111 111112222222211 11234567889999999999999999999999999998865
Q ss_pred H
Q 042075 1019 I 1019 (1033)
Q Consensus 1019 ~ 1019 (1033)
.
T Consensus 316 ~ 316 (321)
T 2qkw_B 316 L 316 (321)
T ss_dssp S
T ss_pred c
Confidence 3
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.8e-42 Score=398.60 Aligned_cols=407 Identities=23% Similarity=0.274 Sum_probs=241.3
Q ss_pred CeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccc-------------cEEecccCCCCCCCCc
Q 042075 84 QRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRL-------------QVLALHNNSIGGEIPA 150 (1033)
Q Consensus 84 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p~ 150 (1033)
.+++.++++++++ |.+|+++++|++|++|++++|+++|.+|.+++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4688899999999 8999999999999999999999999999999998875 999999999995 565
Q ss_pred cccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCC
Q 042075 151 NISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNL 230 (1033)
Q Consensus 151 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 230 (1033)
. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .|+.+++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 3 3789999999999996 7764 3799999999999995 4432 2689999999999996 77 59999999
Q ss_pred CcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCcccccccc
Q 042075 231 VNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNS 310 (1033)
Q Consensus 231 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 310 (1033)
++|++++|++++ +|..+ .+|++|++++|++++ +| . +..+++|++|++++|++++ +|... ++|++|++++
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~-~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~ 224 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-E-LQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGN 224 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-C-CTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-c-ccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcC
Confidence 999999999995 66544 589999999999996 66 3 5689999999999999996 55443 5899999999
Q ss_pred ccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCC
Q 042075 311 NKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNK 390 (1033)
Q Consensus 311 N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~ 390 (1033)
|+++. +|.+..+++|++|++++|.+... |. ..++|+.|++++|+
T Consensus 225 n~l~~-lp~~~~l~~L~~L~l~~N~l~~l-------------------------------~~----~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 225 NILEE-LPELQNLPFLTTIYADNNLLKTL-------------------------------PD----LPPSLEALNVRDNY 268 (454)
T ss_dssp SCCSS-CCCCTTCTTCCEEECCSSCCSSC-------------------------------CS----CCTTCCEEECCSSC
T ss_pred CcCCc-ccccCCCCCCCEEECCCCcCCcc-------------------------------cc----cccccCEEECCCCc
Confidence 99984 44566666666665555554321 11 11345555555555
Q ss_pred CCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCcc
Q 042075 391 IFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSL 470 (1033)
Q Consensus 391 i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~ 470 (1033)
+++ +|.. +++|++|++++|++++. |.. .++|+.|++++|+++ + ++..
T Consensus 269 l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~-----------------------~-i~~~- 315 (454)
T 1jl5_A 269 LTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIR-----------------------S-LCDL- 315 (454)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCS-----------------------E-ECCC-
T ss_pred ccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCC-----------------------c-ccCC-
Confidence 554 2222 24455555555555531 110 134555555555444 2 1110
Q ss_pred CCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcccccccc--ccCcccccccc
Q 042075 471 GQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRG--EIPRTLGSCIK 548 (1033)
Q Consensus 471 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~ 548 (1033)
.++|++|++++|++++ +|..+ .++ +.|++++|+++ .+|. .+++|+.|++++|++++ .+|.+++.
T Consensus 316 --~~~L~~L~Ls~N~l~~-lp~~~---~~L-~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--- 381 (454)
T 1jl5_A 316 --PPSLEELNVSNNKLIE-LPALP---PRL-ERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--- 381 (454)
T ss_dssp --CTTCCEEECCSSCCSC-CCCCC---TTC-CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE---
T ss_pred --cCcCCEEECCCCcccc-ccccC---CcC-CEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh---
Confidence 1366677777777763 55432 233 66777777777 3555 36788899999999987 67776654
Q ss_pred cceeecccccccCcccccccCcccCCccccccccccc--cCCcccccccccceeecCCCcCcccCCC
Q 042075 549 LELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSG--KIPEFLVGFQLLEYLNLSNNDFEGMVPT 613 (1033)
Q Consensus 549 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 613 (1033)
|+.|++.|.+|.. +++|+.||+++|++++ .+|.+ ++.|.+++|.+.+.+|.
T Consensus 382 -----L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 382 -----LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp -----EECCC---------------------------------------------------------
T ss_pred -----hhhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 3457777788874 5789999999999987 66754 45667889999888775
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-41 Score=381.19 Aligned_cols=290 Identities=34% Similarity=0.565 Sum_probs=230.1
Q ss_pred CCCCCCCHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc-hhHHHHHHHHHHHHhcCCCCceeEe
Q 042075 696 NSFPNISYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKIL 774 (1033)
Q Consensus 696 ~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~ 774 (1033)
.....+++.++....++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 34567899999999999999999999999999999865 688999999875432 2234789999999999999999999
Q ss_pred eeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCC
Q 042075 775 TACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKP 854 (1033)
Q Consensus 775 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (1033)
++|. ..+..++||||+++|+|.++++... .....+++..+..++.|++.||+|||+++.++|+||||||
T Consensus 94 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp 162 (326)
T 3uim_A 94 GFCM-----TPTERLLVYPYMANGSVASCLRERP------ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162 (326)
T ss_dssp EEEC-----CSSCCEEEEECCTTCBHHHHHHCCS------TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSG
T ss_pred EEEe-----cCCceEEEEEeccCCCHHHHHHhcc------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCch
Confidence 9953 4557899999999999999996421 2345689999999999999999999998778999999999
Q ss_pred CCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccc--
Q 042075 855 SNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMF-- 932 (1033)
Q Consensus 855 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~-- 932 (1033)
+||++++++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 163 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 163 ANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp GGEEECTTCCEEECCCSSCEECCSSSSCE-ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred hhEEECCCCCEEeccCccccccCcccccc-cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 99999999999999999998765433322 223448999999999988899999999999999999999999996321
Q ss_pred -cCCccHHHHHhhhCCcc-hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 042075 933 -EGDMNLHNFAKTALPDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVV 1010 (1033)
Q Consensus 933 -~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 1010 (1033)
..+.....+........ .....+..... ....+.++.+.+++.+||+.||++|||++||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 303 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQG------------------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCTT------------------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhcc------------------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHH
Confidence 22233333333333222 22222222211 12345677899999999999999999999999
Q ss_pred HHHHHH
Q 042075 1011 HQLQSI 1016 (1033)
Q Consensus 1011 ~~L~~i 1016 (1033)
++|++.
T Consensus 304 ~~L~~~ 309 (326)
T 3uim_A 304 RMLEGD 309 (326)
T ss_dssp HHHHTS
T ss_pred HHhcCc
Confidence 999864
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=377.70 Aligned_cols=266 Identities=23% Similarity=0.386 Sum_probs=215.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++. .++..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-----KDKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-----cCCeeE
Confidence 457899999999999999999999999999999987666667788999999999999999999999954 445789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++|+|.++++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKS---------MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHH---------CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEee
Confidence 99999999999999953 345689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCcccc------------ccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 042075 870 FGLATFLPLSHAQTS------------SIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN 937 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~ 937 (1033)
||+++.......... .....||+.|+|||++.+..++.++|||||||++|||++|..||.........
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 999987644332211 11345999999999999999999999999999999999999998643221111
Q ss_pred HHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 042075 938 LHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIK 1017 (1033)
Q Consensus 938 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 1017 (1033)
... ......+. ..+..+++++.+++.+||+.||++|||+.|+++.|++++
T Consensus 232 ~~~--------~~~~~~~~----------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 232 FGL--------NVRGFLDR----------------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp SSB--------CHHHHHHH----------------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hhh--------hhhccccc----------------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000 00000000 001123455899999999999999999999999999998
Q ss_pred HHhhh
Q 042075 1018 NILLG 1022 (1033)
Q Consensus 1018 ~~~~~ 1022 (1033)
+...+
T Consensus 282 ~~~~~ 286 (310)
T 3s95_A 282 MHLAG 286 (310)
T ss_dssp HHHHH
T ss_pred HhccC
Confidence 87653
No 52
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.4e-41 Score=371.96 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=206.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||+||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++. .++..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE-----ECCEEE
Confidence 468999999999999999999999899999999998666556678899999999999999999999953 445789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++|+|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEee
Confidence 99999999999999842 3588999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDH 949 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 949 (1033)
||++.......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........+.
T Consensus 160 fg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~- 235 (297)
T 3fxz_A 160 FGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPE- 235 (297)
T ss_dssp CTTCEECCSTTCCB--CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCC-
T ss_pred CCCceecCCccccc--CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCC-
Confidence 99998765443322 22459999999999999999999999999999999999999985321110 000000000000
Q ss_pred hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 950 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 950 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
...+...++.+.+++.+||+.||++|||++|+++.
T Consensus 236 ----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 236 ----------------------------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ----------------------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----------------------------CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00011234568999999999999999999999873
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.4e-41 Score=376.74 Aligned_cols=285 Identities=23% Similarity=0.307 Sum_probs=212.0
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.++||+|+||+||+|++. ++.||||+++.... ......+|+.++++++||||+++++++.... ......
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~ 97 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDL 97 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceE
Confidence 4568999999999999999999986 78999999975432 3345667999999999999999999975432 113357
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhC-------CCCCcEeccCCCCCeEecC
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHD-------CQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~~~ivHrDlkp~NIll~~ 861 (1033)
++||||+++|+|.++++. ..+++.++..++.|++.||+|||+. +.++|+||||||+||++++
T Consensus 98 ~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~ 166 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKA-----------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166 (322)
T ss_dssp EEEEECCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT
T ss_pred EEEEecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC
Confidence 999999999999999942 3489999999999999999999975 2448999999999999999
Q ss_pred CCcEEEeecccceecCCCCccccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCccccCCc
Q 042075 862 EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM 936 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~ 936 (1033)
++.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 167 ~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 246 (322)
T 3soc_A 167 NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246 (322)
T ss_dssp TCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCC
T ss_pred CCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhc
Confidence 99999999999987765544333333569999999999876 3567789999999999999999999975432211
Q ss_pred -cHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 042075 937 -NLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQS 1015 (1033)
Q Consensus 937 -~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 1015 (1033)
.+...... . ....++.+..... ..+...........+++++.+++.+||+.||++|||++||++.|++
T Consensus 247 ~~~~~~~~~-~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 247 LPFEEEIGQ-H-PSLEDMQEVVVHK---------KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp CTTHHHHCS-S-CCHHHHHHHHTTS---------CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cchhhhhcc-C-Cchhhhhhhhhcc---------cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11110000 0 0000000000000 0000000011122456779999999999999999999999999999
Q ss_pred HHHH
Q 042075 1016 IKNI 1019 (1033)
Q Consensus 1016 i~~~ 1019 (1033)
+++.
T Consensus 316 l~~~ 319 (322)
T 3soc_A 316 MQRL 319 (322)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 54
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.3e-40 Score=364.19 Aligned_cols=284 Identities=30% Similarity=0.453 Sum_probs=224.6
Q ss_pred CCCCCCHHHHHHhhCCCCcc------ceecccCceeEEEEEeCCCCeEEEEEEeecc----CchhHHHHHHHHHHHHhcC
Q 042075 697 SFPNISYQNLYNATDGFTSA------NLIGAGSFGSVYKGILDEGKTIVAVKVFNLL----HHGAFKSFIAECNTLKNIR 766 (1033)
Q Consensus 697 ~~~~~~~~~l~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 766 (1033)
....+++.++..++++|... +.||+|+||.||+|.+ +++.||||++... .....+.+.+|+.++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678999999999998877 8999999999999997 4788999998642 2334578899999999999
Q ss_pred CCCceeEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 042075 767 HRNLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP 846 (1033)
Q Consensus 767 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 846 (1033)
||||+++++++ ...+..++||||+++++|.+++... .....+++..+..++.|++.||+|||++ +
T Consensus 89 h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ 153 (307)
T 2nru_A 89 HENLVELLGFS-----SDGDDLCLVYVYMPNGSLLDRLSCL-------DGTPPLSWHMRCKIAQGAANGINFLHEN---H 153 (307)
T ss_dssp CTTBCCEEEEE-----CSSSSCEEEEECCTTCBHHHHHHTG-------GGCCCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred CCCeEEEEEEE-----ecCCceEEEEEecCCCcHHHHHHhc-------cCCCCCCHHHHHHHHHHHHHHHHHHhcC---C
Confidence 99999999995 4455789999999999999999531 2335689999999999999999999999 9
Q ss_pred cEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCC
Q 042075 847 IVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKK 926 (1033)
Q Consensus 847 ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~ 926 (1033)
|+||||||+||++++++.+||+|||+++...............||+.|+|||++.+ .++.++||||||+++|||++|+.
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999987654433322333458999999998765 58999999999999999999999
Q ss_pred CCCccccCCccHHHHHhhh--CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC
Q 042075 927 PTDIMFEGDMNLHNFAKTA--LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM 1004 (1033)
Q Consensus 927 p~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 1004 (1033)
||....... ....+.... ....+.+.+++.+.. .+...++++.+++.+||+.||++||
T Consensus 233 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~cl~~~p~~Rp 292 (307)
T 2nru_A 233 AVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMND-------------------ADSTSVEAMYSVASQCLHEKKNKRP 292 (307)
T ss_dssp SBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCSSCSC-------------------CCHHHHHHHHHHHHHHTCSSTTTSC
T ss_pred CcccCcchH-HHHHHHHHhhhhhhhhhhhccccccc-------------------cchHHHHHHHHHHHHHcCCCcccCc
Confidence 997543222 111111111 111122333322211 1234567899999999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 042075 1005 DMTNVVHQLQSIKN 1018 (1033)
Q Consensus 1005 t~~evl~~L~~i~~ 1018 (1033)
|++||++.|+++++
T Consensus 293 s~~~l~~~L~~l~~ 306 (307)
T 2nru_A 293 DIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999999854
No 55
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-40 Score=378.74 Aligned_cols=272 Identities=22% Similarity=0.352 Sum_probs=213.6
Q ss_pred hCCCCccceecccCceeEEEEEeC-------CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhc-CCCCceeEeeeeccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILD-------EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 780 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 780 (1033)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+++.+|+++++++ +||||++++++|
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE---
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 467899999999999999999874 346789999997543 33457799999999999 899999999995
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCcc------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCC
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDE------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKP 854 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (1033)
..++..|+||||+++|+|.++++....... .......+++.++..++.||+.||+|||++ +|+||||||
T Consensus 157 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 157 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred --ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 345578999999999999999965321100 011234689999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 042075 855 SNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFE 933 (1033)
Q Consensus 855 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~ 933 (1033)
+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999999997655443333333447889999999999999999999999999999999 9999863211
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQL 1013 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1013 (1033)
........... +...+..++.++.+++.+||+.||++|||+.|+++.|
T Consensus 312 --~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 312 --EELFKLLKEGH------------------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp --GGHHHHHHTTC------------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHhcCC------------------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11111111000 0001112345689999999999999999999999999
Q ss_pred HHHHHHhh
Q 042075 1014 QSIKNILL 1021 (1033)
Q Consensus 1014 ~~i~~~~~ 1021 (1033)
+++.....
T Consensus 360 ~~il~~~~ 367 (370)
T 2psq_A 360 DRILTLTT 367 (370)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99977554
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.4e-40 Score=386.30 Aligned_cols=361 Identities=20% Similarity=0.234 Sum_probs=244.2
Q ss_pred ccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCccc
Q 042075 99 YISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGS 178 (1033)
Q Consensus 99 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 178 (1033)
..+..++++++|++|+|++|++++ +| .|+.+++|++|+|++|.+++ +| ++++++|++|+|++|++++. | +++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 334456666777777777777765 34 56777777777777777764 33 66677777777777777643 3 666
Q ss_pred ccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEe
Q 042075 179 LSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFD 258 (1033)
Q Consensus 179 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 258 (1033)
+++|++|++++|++++ +| ++++++|++|++++|++++. + ++.+++|++|++++|+..+.+ .+..
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~-------- 168 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTP-------- 168 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTT--------
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--cccc--------
Confidence 7777777777777765 33 66666777777777776653 2 556666666666666444333 2334
Q ss_pred ccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCC
Q 042075 259 AGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGS 338 (1033)
Q Consensus 259 ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~ 338 (1033)
+++|++|++++|++++ +| +..+++|+.|++++|++++.. +..
T Consensus 169 -----------------l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~~--l~~---------------- 210 (457)
T 3bz5_A 169 -----------------QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKLD--LNQ---------------- 210 (457)
T ss_dssp -----------------CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCCC--CTT----------------
T ss_pred -----------------CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCeec--ccc----------------
Confidence 4455555555555554 23 555666666666666665320 111
Q ss_pred CCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCccccc
Q 042075 339 GEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGT 418 (1033)
Q Consensus 339 ~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 418 (1033)
.++|+.|++++|++++ +| ++.+++|++|++++|++++.
T Consensus 211 ---------------------------------------l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 211 ---------------------------------------NIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp ---------------------------------------CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred ---------------------------------------CCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 1356666666666665 34 66777788888888888764
Q ss_pred CChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCch
Q 042075 419 IPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLS 498 (1033)
Q Consensus 419 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 498 (1033)
. +..+++|+.|++++|++ +.|++++|.+.+.+| ++.+++|+.|++++|++.+.+|... .
T Consensus 249 ~---~~~l~~L~~L~l~~n~L-------------~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~---~ 307 (457)
T 3bz5_A 249 D---VSTLSKLTTLHCIQTDL-------------LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQA---A 307 (457)
T ss_dssp C---CTTCTTCCEEECTTCCC-------------SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTT---C
T ss_pred C---HHHCCCCCEEeccCCCC-------------CEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCC---C
Confidence 3 45567788888777654 467788888777776 4678889999999998887777432 2
Q ss_pred hHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCcccc
Q 042075 499 SLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDL 578 (1033)
Q Consensus 499 ~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 578 (1033)
.+ +.|++++ +++|+.|++++|+|++. + ++++++|+.|++++|+|++ ++.|..|++
T Consensus 308 ~L-~~L~l~~-------------~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l 362 (457)
T 3bz5_A 308 GI-TELDLSQ-------------NPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPA 362 (457)
T ss_dssp CC-SCCCCTT-------------CTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSG
T ss_pred cc-eEechhh-------------cccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccc
Confidence 22 4444444 36899999999999974 3 8999999999999999985 356778899
Q ss_pred ccccccccCCcccccccccceeecCCCcCcccCCCc
Q 042075 579 SQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 579 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 614 (1033)
++|+++|. ..+..|..+++++|+|+|.||..
T Consensus 363 ~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 363 LNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp GGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 99999986 35677888999999999999975
No 57
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.2e-41 Score=373.59 Aligned_cols=279 Identities=22% Similarity=0.361 Sum_probs=210.7
Q ss_pred hCCCCccceecccCceeEEEEE----eCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGI----LDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||+||+|+ ...+++.||||+++.......+.+.+|++++++++||||++++++|... ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 4678999999999999999999 4567899999999876666678899999999999999999999986432 23
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHH---------CGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHh---------cccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeE
Confidence 457999999999999999953 334589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++|..||...... .......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~ 230 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGN 230 (295)
T ss_dssp EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCT
T ss_pred EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcC
Confidence 99999999876543321 1122233778899999999899999999999999999999999998532110 0000000
Q ss_pred hCCcc-h-hhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 945 ALPDH-V-VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 945 ~~~~~-~-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
..... . .... .......+...+..+++++.+++.+||+.||++|||++|+++.|+++++...
T Consensus 231 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 231 DKQGQMIVFHLI---------------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp TCCTHHHHHHHH---------------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ccccchhHHHHH---------------HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 00000 0 0000 0000011111223456779999999999999999999999999999987653
No 58
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.1e-41 Score=386.71 Aligned_cols=262 Identities=25% Similarity=0.368 Sum_probs=211.0
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+++.+|++++++++||||++++++|. .++.
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQP 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-----SSSS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----cCCC
Confidence 3457889999999999999999999889999999987543 233457889999999999999999999963 4457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++|+|.++++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl 254 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRT---------EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKI 254 (377)
T ss_dssp CEEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEE
Confidence 8999999999999999953 334689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..........
T Consensus 255 ~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~ 332 (377)
T 3cbl_A 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGG 332 (377)
T ss_dssp CCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTC
T ss_pred CcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC
Confidence 99999987544322222222235778999999988899999999999999999998 99998632111 1111111000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
+...+..+++++.+++.+||+.||++|||++++++.|+++++.
T Consensus 333 ------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 333 ------------------------------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0011112346689999999999999999999999999999765
No 59
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9.4e-41 Score=370.40 Aligned_cols=264 Identities=27% Similarity=0.369 Sum_probs=200.4
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
...++|++.+.||+|+||+||+|++. ++.||||++.... ....+++.+|++++++++||||+++++++ ...
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 106 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQP 106 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CST
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EEC
Confidence 34568899999999999999999884 7889999987543 33456789999999999999999999995 445
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--cEeccCCCCCeEecCCC
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP--IVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~~~ 863 (1033)
+..++||||+++|+|.+++... .....+++.++..++.|++.||+|||++ + |+||||||+||++++++
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~ 176 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKS-------GAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKY 176 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHST-------THHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTC
T ss_pred CceEEEEecCCCCcHHHHHhhc-------CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCC
Confidence 5789999999999999999531 1223589999999999999999999999 8 99999999999999999
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ......
T Consensus 177 ~~kL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~ 252 (309)
T 3p86_A 177 TVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVG 252 (309)
T ss_dssp CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHH
T ss_pred cEEECCCCCCccccccccc--cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence 9999999999864333211 222458999999999999999999999999999999999999986321110 000000
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
.... +...+..+++++.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 253 ~~~~-----------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 253 FKCK-----------------------------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HSCC-----------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred hcCC-----------------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 0000 000011234568999999999999999999999999999876553
No 60
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.2e-40 Score=369.69 Aligned_cols=263 Identities=20% Similarity=0.249 Sum_probs=212.2
Q ss_pred CCCCHHHHHHhhCC----------CCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCC
Q 042075 699 PNISYQNLYNATDG----------FTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHR 768 (1033)
Q Consensus 699 ~~~~~~~l~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 768 (1033)
+.++++++..+++. |+..+.||+|+||.||+|++..+++.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788888887764 67778999999999999999989999999999876666667899999999999999
Q ss_pred CceeEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 042075 769 NLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIV 848 (1033)
Q Consensus 769 niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 848 (1033)
||+++++++. ..+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||+. +|+
T Consensus 103 niv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~---~iv 163 (321)
T 2c30_A 103 NVVEMYKSYL-----VGEELWVLMEFLQGGALTDIVSQ-----------VRLNEEQIATVCEAVLQALAYLHAQ---GVI 163 (321)
T ss_dssp TBCCEEEEEE-----ETTEEEEEECCCCSCBHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CcceEEEEEE-----ECCEEEEEEecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 9999999954 34578999999999999999842 3589999999999999999999999 999
Q ss_pred eccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 042075 849 HCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 849 HrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
||||||+||+++.++.+||+|||++.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf 241 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc--ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999998765433222 2345999999999999999999999999999999999999998
Q ss_pred CccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 042075 929 DIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTN 1008 (1033)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 1008 (1033)
...... ............ .. ......++++.+++.+||+.||++|||++|
T Consensus 242 ~~~~~~--~~~~~~~~~~~~--------~~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 291 (321)
T 2c30_A 242 FSDSPV--QAMKRLRDSPPP--------KL--------------------KNSHKVSPVLRDFLERMLVRDPQERATAQE 291 (321)
T ss_dssp TTSCHH--HHHHHHHHSSCC--------CC--------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCCHH--HHHHHHhcCCCC--------Cc--------------------CccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 532110 000001100000 00 000112356889999999999999999999
Q ss_pred HHHH
Q 042075 1009 VVHQ 1012 (1033)
Q Consensus 1009 vl~~ 1012 (1033)
+++.
T Consensus 292 ll~h 295 (321)
T 2c30_A 292 LLDH 295 (321)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9874
No 61
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.8e-40 Score=365.28 Aligned_cols=265 Identities=29% Similarity=0.457 Sum_probs=204.1
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||+||+|++.. .+|+|+++.. .....+.+.+|++++++++||||+++++++. .+
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~ 104 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KD 104 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SS
T ss_pred cccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cC
Confidence 34689999999999999999999763 4889988743 2344578899999999999999999999852 23
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+||++++++.+|
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 172 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVK 172 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEE
T ss_pred cEEEEEecCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEE
Confidence 57899999999999999953 345689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
|+|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||......+........
T Consensus 173 l~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~ 252 (307)
T 3lb7_A 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252 (307)
T ss_dssp ECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH
T ss_pred EccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc
Confidence 99999998654322222223345999999999986 567899999999999999999999999643221111111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
.......... ...+++++.+++.+||+.||++||++.|+++.|+.++...+
T Consensus 253 ~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 253 GYASPDLSKL---------------------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TCCCCCSTTS---------------------------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CCCCcchhhh---------------------------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 1111111000 01234568999999999999999999999999999987654
No 62
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.4e-40 Score=371.53 Aligned_cols=255 Identities=21% Similarity=0.282 Sum_probs=203.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc-hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++ ..++..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCeE
Confidence 4689999999999999999999999999999999874332 2346688999999999999999999995 445688
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++|+|.+++. ....+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEE
Confidence 99999999999999994 345689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++...............||+.|+|||++.+..+ +.++||||+||++|||++|+.||.........+..+......
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 227 (323)
T 3tki_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227 (323)
T ss_dssp CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT
T ss_pred EeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc
Confidence 9999987643333332333559999999999988775 788999999999999999999997433222222222111100
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. .......++.+++.+||+.||++|||++|+++.
T Consensus 228 ~~------------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 LN------------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ST------------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC------------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 001123557899999999999999999999764
No 63
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-40 Score=371.26 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=204.6
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
...++|++.+.||+|+||.||+|++..+++.||||+++.. .....+++.+|++++++++||||+++++++ ...
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~ 86 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETE 86 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EEC
Confidence 3456899999999999999999999889999999999753 334456788999999999999999999995 445
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~ 153 (328)
T 3fe3_A 87 KTLYLIMEYASGGEVFDYLV----------AHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNI 153 (328)
T ss_dssp SEEEEEECCCTTCBHHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred CEEEEEEECCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCE
Confidence 68999999999999999994 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVS-INGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||++......... ....||+.|+|||++.+..++ .++||||+||++|||++|+.||+... .......
T Consensus 154 kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~ 225 (328)
T 3fe3_A 154 KIADFGFSNEFTVGGKL---DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRER 225 (328)
T ss_dssp EECSTTCCGGGSSSCGG---GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH
T ss_pred EEeeccCceecCCCCcc---ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence 99999999876543322 234599999999999888775 78999999999999999999986321 1111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... . ..+...++++.+++.+||+.||++|||++|+++.
T Consensus 226 i~~~~--------~--------------------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 226 VLRGK--------Y--------------------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHCC--------C--------------------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHhCC--------C--------------------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 0 0001123558899999999999999999999864
No 64
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.9e-40 Score=364.77 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=205.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHh--cCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKN--IRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||+||+|++ +++.||||+++.. ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCce
Confidence 46899999999999999999998 4889999998643 23556667777766 79999999999865432 33456
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCcEeccCCCCCeEe
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLH--------HDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivHrDlkp~NIll 859 (1033)
.++||||+++|+|.++++. ..+++.++..++.|++.||+||| +. +|+||||||+||++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill 146 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL-----------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILV 146 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEE
T ss_pred eEEehhhccCCCHHHHHhh-----------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEE
Confidence 8999999999999999942 35899999999999999999999 77 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccc--cccccccccccccccccCCC------CCCcccchHHHHHHHHHHHhC-------
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQT--SSIFAKGSIGYIAPEYGLGS------EVSINGDVYSYGILLLELVTR------- 924 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~vl~elltg------- 924 (1033)
+.++.+||+|||+|+......... ......||+.|+|||++.+. .+++++|||||||++|||++|
T Consensus 147 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~ 226 (301)
T 3q4u_A 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226 (301)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence 999999999999998764433221 11223599999999998876 556799999999999999999
Q ss_pred ---CCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCC
Q 042075 925 ---KKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPE 1001 (1033)
Q Consensus 925 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 1001 (1033)
+.||......+................... ........+++++.+++.+||+.||+
T Consensus 227 ~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 227 EDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNI---------------------PNRWFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC---------------------CGGGGGSHHHHHHHHHHHHHCCSSGG
T ss_pred ccccccccccCCCCcchhhhhHHHhccCCCCCC---------------------ChhhccCccHHHHHHHHHHHhhcChh
Confidence 777754433333333322221111100000 00001224567899999999999999
Q ss_pred CCCCHHHHHHHHHHH
Q 042075 1002 DRMDMTNVVHQLQSI 1016 (1033)
Q Consensus 1002 ~RPt~~evl~~L~~i 1016 (1033)
+|||++||++.|+++
T Consensus 286 ~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 286 ARLTALRIKKTLTKI 300 (301)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhcc
Confidence 999999999999986
No 65
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.8e-40 Score=377.45 Aligned_cols=281 Identities=22% Similarity=0.288 Sum_probs=217.7
Q ss_pred CHHHHHHhhCCCCccceecccCceeEEEEE-----eCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhc-CCCCceeEe
Q 042075 702 SYQNLYNATDGFTSANLIGAGSFGSVYKGI-----LDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKIL 774 (1033)
Q Consensus 702 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~ 774 (1033)
...+.....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 445555667899999999999999999999 45567999999997543 33456799999999999 899999999
Q ss_pred eeeccccccCCCceeEEEEcccCCchhhhcccCCCCcc------------------------------------------
Q 042075 775 TACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDE------------------------------------------ 812 (1033)
Q Consensus 775 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------------------ 812 (1033)
++|. ..+...++||||+++|+|.++++.......
T Consensus 93 ~~~~----~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 93 GACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEEC----STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeee----cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 9963 334458999999999999999975432100
Q ss_pred --------------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeecccceecCC
Q 042075 813 --------------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPL 878 (1033)
Q Consensus 813 --------------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~ 878 (1033)
.......+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 000122389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCcchhhhcccc
Q 042075 879 SHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDST 957 (1033)
Q Consensus 879 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 957 (1033)
...........||+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .............
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~-------- 316 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMR-------- 316 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCCC--------
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCCC--------
Confidence 443333334558899999999998999999999999999999998 999986432211 1111111100000
Q ss_pred cCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 958 LLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 958 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
.+..+++++.+++.+||+.||++|||++|++++|+++.+..
T Consensus 317 ----------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 317 ----------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 00112356899999999999999999999999999987653
No 66
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=371.81 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=196.3
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
..++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++ ...+.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCCE
Confidence 4578999999999999999999999899999999987543 23346789999999999999999999995 44568
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||
T Consensus 83 ~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYII----------SQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEE
Confidence 999999999999999994 334689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||++.......... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.. ..........
T Consensus 150 ~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~~~~~~~~i~ 223 (347)
T 3zgw_A 150 IDFGLCAKPKGNKDYH-LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----NVMALYKKIM 223 (347)
T ss_dssp CCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHH
T ss_pred EeccCcccccCCCCcc-ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHH
Confidence 9999988654332211 122458999999999988775 89999999999999999999998632 1111111100
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. ... ..+...++++.+++.+||+.||++|||++|+++.
T Consensus 224 ~--------~~~--------------------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 224 R--------GKY--------------------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp H--------TCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred c--------CCC--------------------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 000 0001123457899999999999999999999875
No 67
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=370.22 Aligned_cols=264 Identities=22% Similarity=0.358 Sum_probs=208.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCC---CeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEG---KTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|++..+ +..||||+++.. .....+.+.+|+.++++++||||+++++++ ..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 35788899999999999999999754 446999999754 334457799999999999999999999995 344
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++|+|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRT---------HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVC 190 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CccEEEeeCCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCE
Confidence 578999999999999999953 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 866 HVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 191 kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~ 268 (325)
T 3kul_A 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVE 268 (325)
T ss_dssp EECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHH
T ss_pred EECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHH
Confidence 99999999877543221 12222336788999999998899999999999999999999 99998532111 1111000
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLG 1022 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 1022 (1033)
... +...+..+++++.+++.+||+.||++|||+.||++.|+++.+....
T Consensus 269 ~~~------------------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 269 EGY------------------------------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp TTC------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred cCC------------------------------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 000 0001112345689999999999999999999999999999876544
No 68
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3e-40 Score=364.03 Aligned_cols=264 Identities=20% Similarity=0.346 Sum_probs=206.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+++.+|+.++++++||||+++++++ ..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----ECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----eeCC
Confidence 46899999999999999999999989999999998642 233457789999999999999999999994 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIE----------SHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp EEEEEEECCCSCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 8999999999999999994 334689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+++......... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ....
T Consensus 152 l~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----~~~~-~~~~ 225 (294)
T 4eqm_A 152 IFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA----VSIA-IKHI 225 (294)
T ss_dssp ECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH----HHHH-HHHH
T ss_pred EEeCCCccccccccccc-cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----HHHH-HHHh
Confidence 99999998654332221 2224489999999999999999999999999999999999999863211 1111 1000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHHh
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-DMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~i~~~~ 1020 (1033)
....... .......+++.+.+++.+||+.||++|| +++++.+.|+++....
T Consensus 226 ~~~~~~~-----------------------~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 226 QDSVPNV-----------------------TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp SSCCCCH-----------------------HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred hccCCCc-----------------------chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 0000000 0000112346689999999999999999 8999999998875543
No 69
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-39 Score=367.90 Aligned_cols=253 Identities=18% Similarity=0.210 Sum_probs=203.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCch------hHHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHG------AFKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
..++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~----- 84 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY----- 84 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----
Confidence 346799999999999999999999999999999999754321 246789999999999999999999994
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
...+..++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++++
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~ 151 (361)
T 2yab_A 85 ENRTDVVLILELVSGGELFDFLA----------QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDK 151 (361)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHT----------TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCT
T ss_pred EeCCEEEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCC
Confidence 45568999999999999999994 335689999999999999999999999 99999999999999877
Q ss_pred C----cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccH
Q 042075 863 M----IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNL 938 (1033)
Q Consensus 863 ~----~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~ 938 (1033)
+ .+||+|||+++........ ....||+.|+|||++.+..++.++||||+||++|||++|..||.....
T Consensus 152 ~~~~~~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~----- 223 (361)
T 2yab_A 152 NIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----- 223 (361)
T ss_dssp TSSSCCEEECCCSSCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----
T ss_pred CCCccCEEEEecCCceEcCCCCcc---ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 6 7999999999876553322 224499999999999999999999999999999999999999853211
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
........ .... .... ......++.+.+++.+||..||++|||+.|+++
T Consensus 224 ~~~~~~i~--------~~~~-~~~~---------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 224 QETLANIT--------AVSY-DFDE---------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHH--------TTCC-CCCH---------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH--------hcCC-CCCc---------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111000 0000 0000 000122456889999999999999999999985
No 70
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.6e-40 Score=357.15 Aligned_cols=258 Identities=27% Similarity=0.363 Sum_probs=207.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||+||+|++. +++.||+|+++.... ..+++.+|++++++++||||+++++++ ..++..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceE
Confidence 457899999999999999999997 577899999975443 346789999999999999999999995 4455789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++++|.++++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHh---------cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecc
Confidence 99999999999999953 345689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ............
T Consensus 150 fg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~ 226 (269)
T 4hcu_A 150 FGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL 226 (269)
T ss_dssp TTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC
T ss_pred ccccccccccccc-cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCccC
Confidence 9999866443221 2222347788999999988899999999999999999999 99998632111 111100000000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
. .+...++++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 227 ~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 Y------------------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp C------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C------------------------------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0 0011235589999999999999999999999999999764
No 71
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=363.42 Aligned_cols=253 Identities=20% Similarity=0.261 Sum_probs=204.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||+||+|++..+++.||+|+++... .....+.+|+.++++++||||+++++++ ...+..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESF-----ESMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEE
Confidence 468999999999999999999999999999999987543 3446788999999999999999999995 4455899
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC--CCcEEE
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE--EMIAHV 867 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kL 867 (1033)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINT---------SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTS---------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEE
Confidence 99999999999999953 334689999999999999999999999 9999999999999987 789999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+++......... ...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.........
T Consensus 146 ~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~ 221 (321)
T 1tki_A 146 IEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYT 221 (321)
T ss_dssp CCCTTCEECCTTCEEE---EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC
T ss_pred EECCCCeECCCCCccc---cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHcCCCC
Confidence 9999998875443222 234899999999999988999999999999999999999998632111 001111110000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... ......++++.+++.+||+.||++|||+.|+++.
T Consensus 222 ------------~~~----------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 222 ------------FDE----------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ------------CCH----------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------------CCh----------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 0011234568999999999999999999999885
No 72
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=362.44 Aligned_cols=286 Identities=20% Similarity=0.222 Sum_probs=213.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.++||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceE
Confidence 357999999999999999999999899999999997533 2345678899999999999999999998642 234477
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe----cCCCc
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL----DEEMI 864 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----~~~~~ 864 (1033)
++||||+++++|.+++... .....+++.++..++.||+.||+|||++ +|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 154 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEP-------SNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSV 154 (319)
T ss_dssp EEEEECCTTCBHHHHHHSG-------GGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEE
T ss_pred EEEEeCCCCCCHHHHHHHh-------ccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCce
Confidence 9999999999999999641 1223489999999999999999999999 99999999999999 77888
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccC--------CCCCCcccchHHHHHHHHHHHhCCCCCCccccCCc
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL--------GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM 936 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~ 936 (1033)
+||+|||+++......... ...||+.|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 155 ~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 231 (319)
T 4euu_A 155 YKLTDFGAARELEDDEQFV---SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (319)
T ss_dssp EEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG
T ss_pred EEEccCCCceecCCCCcee---ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch
Confidence 9999999998775543322 234899999999875 57889999999999999999999999964332222
Q ss_pred cHHHHH--hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 042075 937 NLHNFA--KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQ 1014 (1033)
Q Consensus 937 ~~~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1014 (1033)
...... ....+......+........ . ..................+.+++.+||+.||++|||++|+++...
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 232 NKEVMYKIITGKPSGAISGVQKAENGPI-D-----WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CHHHHHHHHHHCCTTCCEEEECSTTCCE-E-----EESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred hHHHHHHHhcCCCcccchhhhcccCCcc-c-----cCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 111111 11111111110000000000 0 000000111223456778999999999999999999999999988
Q ss_pred HHH
Q 042075 1015 SIK 1017 (1033)
Q Consensus 1015 ~i~ 1017 (1033)
+..
T Consensus 306 d~~ 308 (319)
T 4euu_A 306 DIL 308 (319)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
No 73
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=376.65 Aligned_cols=268 Identities=23% Similarity=0.378 Sum_probs=208.0
Q ss_pred hCCCCccceecccCceeEEEEEe-----CCCCeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGIL-----DEGKTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|++.+.||+|+||+||+|++ ..+++.||||+++.. ......++.+|+.++++++||||+++++++ .
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~ 144 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 144 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----e
Confidence 35789999999999999999994 446788999998643 334456788999999999999999999995 4
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
.....++||||+++|+|.++++..... ......+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPR---PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCC---SSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccc---cCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 455789999999999999999653221 12335689999999999999999999999 999999999999999554
Q ss_pred ---cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHH
Q 042075 864 ---IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 864 ---~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~ 939 (1033)
.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~ 296 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVL 296 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHH
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH
Confidence 599999999975532222222223447899999999988899999999999999999998 9999863211 1111
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
........ ...+..++.++.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 297 ~~i~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 297 EFVTSGGR------------------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp HHHHTTCC------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHcCCC------------------------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11110000 000112345689999999999999999999999999998764
Q ss_pred h
Q 042075 1020 L 1020 (1033)
Q Consensus 1020 ~ 1020 (1033)
.
T Consensus 347 ~ 347 (367)
T 3l9p_A 347 P 347 (367)
T ss_dssp H
T ss_pred h
Confidence 4
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-39 Score=364.61 Aligned_cols=250 Identities=22% Similarity=0.258 Sum_probs=203.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|+++.+++.||+|+++.. .......+.+|+.++++++||||+++++++ ...+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCC
Confidence 46799999999999999999999999999999999753 233456788999999999999999999994 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLS----------RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEEECCTTCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEE
Confidence 8999999999999999984 335689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .........
T Consensus 146 L~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~ 218 (337)
T 1o6l_A 146 ITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELIL 218 (337)
T ss_dssp ECCCTTCBCSCCTTCC--BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH
T ss_pred EeeccchhhcccCCCc--ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----HHHHHHHHH
Confidence 9999999864332221 223459999999999999999999999999999999999999985321 111111100
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-----DMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1012 (1033)
... . . .+...++++.+++.+||+.||++|| +++|+++.
T Consensus 219 ~~~--------~-~-------------------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 219 MEE--------I-R-------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HCC--------C-C-------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred cCC--------C-C-------------------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 000 0 0 0011235689999999999999999 89998764
No 75
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.8e-40 Score=355.02 Aligned_cols=260 Identities=25% Similarity=0.364 Sum_probs=208.3
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|++. ++..||+|+++.... ..+++.+|++++++++||||+++++++ ..++..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPI 78 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSE
T ss_pred chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCce
Confidence 3468999999999999999999887 577899999975443 346789999999999999999999995 445578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 146 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRS---------HGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVS 146 (268)
T ss_dssp EEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEEC
T ss_pred EEEEEccCCCcHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEc
Confidence 999999999999999953 345689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||.+.......... .....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||+..... ........
T Consensus 147 Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~ 220 (268)
T 3sxs_A 147 DFGMTRYVLDDQYVS-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVSQ 220 (268)
T ss_dssp CTTCEEECCTTCEEE-CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHT
T ss_pred cCccceecchhhhhc-ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHHc
Confidence 999998765443322 222346788999999988899999999999999999999 99998632111 11100000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
.. ... .+...++++.+++.+||+.||++|||+.|+++.|+++++..
T Consensus 221 ~~--------~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 221 GH--------RLY-------------------RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp TC--------CCC-------------------CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CC--------CCC-------------------CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 00 000 00012345899999999999999999999999999987653
No 76
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.5e-40 Score=374.58 Aligned_cols=262 Identities=23% Similarity=0.404 Sum_probs=198.0
Q ss_pred hCCCCccceecccCceeEEEEEeC---CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILD---EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+++.+|+.++++++||||++++++| ...
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKS 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeC
Confidence 358999999999999999999986 457789999997543 34456799999999999999999999995 345
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++|+|.++++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 186 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRK---------HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVC 186 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred CceEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCE
Confidence 578999999999999999953 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 866 HVGDFGLATFLPLSHAQT-SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .....
T Consensus 187 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~~ 261 (373)
T 2qol_A 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIK 261 (373)
T ss_dssp EECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHHH
T ss_pred EECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 999999998765432211 1112235778999999998899999999999999999998 9999853211 11111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
.. .... +...+..++.++.+++.+||+.||++||++.||++.|+++.+..
T Consensus 262 ~i---------~~~~------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 262 AV---------DEGY------------------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HH---------HTTE------------------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HH---------HcCC------------------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00 0000 00011123466899999999999999999999999999997654
No 77
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=361.03 Aligned_cols=253 Identities=23% Similarity=0.283 Sum_probs=196.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--------------------------hhHHHHHHHHHHHH
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--------------------------GAFKSFIAECNTLK 763 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 763 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999864321 12356889999999
Q ss_pred hcCCCCceeEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Q 042075 764 NIRHRNLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC 843 (1033)
Q Consensus 764 ~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 843 (1033)
+++||||+++++++.+ ...+..++||||+++++|.+++. ...+++.++..++.||+.||+|||++
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~- 156 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPT-----------LKPLSEDQARFYFQDLIKGIEYLHYQ- 156 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSC-----------SSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999999999999643 23557899999999999988762 24689999999999999999999999
Q ss_pred CCCcEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCC---CCcccchHHHHHHHHH
Q 042075 844 QPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSE---VSINGDVYSYGILLLE 920 (1033)
Q Consensus 844 ~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~vl~e 920 (1033)
+|+||||||+||+++.++.+||+|||+++......... ....||+.|+|||++.+.. ++.++|||||||++||
T Consensus 157 --~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~ 232 (298)
T 2zv2_A 157 --KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232 (298)
T ss_dssp --TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEE--CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHH
T ss_pred --CeeccCCCHHHEEECCCCCEEEecCCCccccccccccc--cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHH
Confidence 99999999999999999999999999998765433221 2245899999999987765 4788999999999999
Q ss_pred HHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCC
Q 042075 921 LVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESP 1000 (1033)
Q Consensus 921 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 1000 (1033)
|++|+.||.... ........... .. ..+ .....++++.+++.+||+.||
T Consensus 233 l~~g~~pf~~~~-----~~~~~~~~~~~--------~~-~~~-----------------~~~~~~~~l~~li~~~l~~dp 281 (298)
T 2zv2_A 233 FVFGQCPFMDER-----IMCLHSKIKSQ--------AL-EFP-----------------DQPDIAEDLKDLITRMLDKNP 281 (298)
T ss_dssp HHHSSCSSCCSS-----HHHHHHHHHHC--------CC-CCC-----------------SSSCCCHHHHHHHHHHTCSCT
T ss_pred HHHCCCCCCCcc-----HHHHHHHHhcc--------cC-CCC-----------------CccccCHHHHHHHHHHhhcCh
Confidence 999999985321 11111100000 00 000 000123568999999999999
Q ss_pred CCCCCHHHHHHH
Q 042075 1001 EDRMDMTNVVHQ 1012 (1033)
Q Consensus 1001 ~~RPt~~evl~~ 1012 (1033)
++|||+.|+++.
T Consensus 282 ~~R~s~~e~l~h 293 (298)
T 2zv2_A 282 ESRIVVPEIKLH 293 (298)
T ss_dssp TTSCCHHHHTTC
T ss_pred hhCCCHHHHhcC
Confidence 999999998753
No 78
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=360.94 Aligned_cols=253 Identities=20% Similarity=0.258 Sum_probs=203.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCch------hHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHG------AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ .
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 84 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----E 84 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----E
Confidence 35689999999999999999999999999999998753321 356789999999999999999999995 4
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
..+..++||||+++++|.+++. ....+++.++..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~ 151 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLA----------EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHT----------TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSS
T ss_pred eCCEEEEEEEcCCCCCHHHHHH----------hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCC
Confidence 4568999999999999999994 235689999999999999999999999 999999999999999887
Q ss_pred ----cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHH
Q 042075 864 ----IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 864 ----~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~ 939 (1033)
.+||+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.
T Consensus 152 ~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~ 227 (326)
T 2y0a_A 152 VPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLA 227 (326)
T ss_dssp SSSCCEEECCCTTCEECCTTSCCC---CCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHH
T ss_pred CCCCCEEEEECCCCeECCCCCccc---cccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHH
Confidence 89999999998775433222 234899999999999999999999999999999999999998532110 0000
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
........ ... ......+..+.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~~-------------~~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 228 NVSAVNYE-------------FED---------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHTCCC-------------CCH---------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhcCCC-------------cCc---------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000000 000 0011234568899999999999999999999873
No 79
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.2e-40 Score=372.22 Aligned_cols=277 Identities=16% Similarity=0.202 Sum_probs=209.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCCC-----CeEEEEEEeeccCchh-----------HHHHHHHHHHHHhcCCCCcee
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEG-----KTIVAVKVFNLLHHGA-----------FKSFIAECNTLKNIRHRNLVK 772 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 772 (1033)
..++|++.+.||+|+||.||+|.+..+ ++.||||++....... ......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356899999999999999999999754 5789999987543211 122345566677788999999
Q ss_pred EeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccC
Q 042075 773 ILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDL 852 (1033)
Q Consensus 773 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDl 852 (1033)
+++++.... ......++||||+ +++|.+++.. ....+++.++..++.||+.||+|||++ +|+||||
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDl 178 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEA---------NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDI 178 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecC
Confidence 999975432 2235689999999 9999999953 335699999999999999999999999 9999999
Q ss_pred CCCCeEec--CCCcEEEeecccceecCCCCccc-----cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCC
Q 042075 853 KPSNVLLD--EEMIAHVGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRK 925 (1033)
Q Consensus 853 kp~NIll~--~~~~~kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~ 925 (1033)
||+||+++ .++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999 88999999999998764332211 112234999999999999999999999999999999999999
Q ss_pred CCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 042075 926 KPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD 1005 (1033)
Q Consensus 926 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 1005 (1033)
.||...... ..+.............+++++.+.. ..+++++.+++..||+.||++||+
T Consensus 259 ~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~li~~cl~~~p~~RP~ 316 (364)
T 3op5_A 259 LPWEDNLKD-PKYVRDSKIRYRENIASLMDKCFPA---------------------ANAPGEIAKYMETVKLLDYTEKPL 316 (364)
T ss_dssp CTTGGGTTC-HHHHHHHHHHHHHCHHHHHHHHSCT---------------------TCCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCccccccC-HHHHHHHHHHhhhhHHHHHHHhccc---------------------ccCHHHHHHHHHHHhcCCCCCCCC
Confidence 999743221 1111112222222222222222110 122467899999999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 042075 1006 MTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 1006 ~~evl~~L~~i~~~~~ 1021 (1033)
++++++.|+++.+...
T Consensus 317 ~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 317 YENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999887653
No 80
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.3e-40 Score=365.94 Aligned_cols=260 Identities=23% Similarity=0.355 Sum_probs=201.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeE----EEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTI----VAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
.++|++.+.||+|+||+||+|++..+++. ||+|.++.. .....+++.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 35789999999999999999998776665 577777532 23445789999999999999999999999742
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
+..++|+||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~ 155 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHH---------STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred -CCeEEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCC
Confidence 247899999999999999953 345689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
+||+|||+|+...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||+..... .......
T Consensus 156 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~ 233 (327)
T 3poz_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE 233 (327)
T ss_dssp EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHH
Confidence 99999999987755444333333457889999999999999999999999999999999 99998642211 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
.... ...+..++.++.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 234 ~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 234 KGER------------------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp TTCC------------------------------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred cCCC------------------------------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1100 000112345689999999999999999999999999998653
No 81
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.5e-39 Score=360.62 Aligned_cols=270 Identities=23% Similarity=0.368 Sum_probs=212.2
Q ss_pred hCCCCccceecccCceeEEEEEe-----CCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGIL-----DEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|.+.+.||+|+||.||+|++ ..+++.||||+++... ....+.+.+|++++++++||||+++++++ .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-----S 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-----e
Confidence 56899999999999999999998 3456899999997543 34457889999999999999999999995 4
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCcc--------------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEe
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDE--------------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVH 849 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 849 (1033)
.++..++||||+++++|.+++........ .......+++.++..++.||++||+|||++ +|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 45578999999999999999965322100 001234589999999999999999999999 9999
Q ss_pred ccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCC
Q 042075 850 CDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPT 928 (1033)
Q Consensus 850 rDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~ 928 (1033)
|||||+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987755444333333457889999999988899999999999999999999 99998
Q ss_pred CccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 042075 929 DIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTN 1008 (1033)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 1008 (1033)
...... ............ ..+..+++++.+++.+||+.||++|||+.|
T Consensus 254 ~~~~~~--~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 254 PGIPPE--RLFNLLKTGHRM------------------------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp TTCCGG--GHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCHH--HHHHHhhcCCcC------------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 632211 111111110000 001123456899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042075 1009 VVHQLQSIKNI 1019 (1033)
Q Consensus 1009 vl~~L~~i~~~ 1019 (1033)
+++.|+++...
T Consensus 302 l~~~l~~~~~~ 312 (314)
T 2ivs_A 302 ISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998653
No 82
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-39 Score=357.16 Aligned_cols=277 Identities=20% Similarity=0.267 Sum_probs=201.7
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ..++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence 57999999999999999999999999999999997433 33347788999999999999999999995 345588
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++ ++.+++.. ....+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDS---------CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999975 66665532 345689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCC-CCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSE-VSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++......... ....||+.|+|||++.+.. ++.++||||+||++|||++|..||.........+.........
T Consensus 144 Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~ 221 (292)
T 3o0g_A 144 NFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221 (292)
T ss_dssp CCTTCEECCSCCSCC--CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCC
T ss_pred ecccceecCCccccc--cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 999998765332222 2234899999999988765 8999999999999999999988864322222222222211111
Q ss_pred cc--hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DH--VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ........ ....... ................+++.+++.+||+.||++|||++|+++.
T Consensus 222 ~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 222 PTEEQWPSMTKL--PDYKPYP---MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCTTTCTTGGGS--TTCCCCC---CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CChhhhhhhccc--ccccccc---cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 10 00000000 0000000 0000000001111234568899999999999999999999863
No 83
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.8e-39 Score=377.74 Aligned_cols=254 Identities=27% Similarity=0.369 Sum_probs=206.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||++++++|. ..++..+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEE----CTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEE----cCCCceE
Confidence 457889999999999999999986 7799999997543 4578999999999999999999999863 3344689
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++|+|.++++. .....+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 264 iv~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 332 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 332 (450)
T ss_dssp EEEECCTTCBHHHHHHH--------HCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEee
Confidence 99999999999999964 2233478999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
||+++....... ...++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..........
T Consensus 333 fG~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~-- 403 (450)
T 1k9a_A 333 FGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGY-- 403 (450)
T ss_dssp CTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTC--
T ss_pred CCCccccccccc-----CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--
Confidence 999986533211 1237889999999999999999999999999999998 99998633211 1111111000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
+...+..+++++.++|.+||+.||++|||+.|+++.|++++..
T Consensus 404 ----------------------------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 ----------------------------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ----------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----------------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0111123456799999999999999999999999999999764
No 84
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-39 Score=357.66 Aligned_cols=253 Identities=26% Similarity=0.395 Sum_probs=201.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchh-------HHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGA-------FKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
.++|++.+.||+|+||+||+|++..+++.||+|++....... .+.+.+|++++++++||||+++++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 468999999999999999999999899999999986432211 1678999999999999999999998532
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--cEeccCCCCCeEec
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP--IVHCDLKPSNVLLD 860 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~ 860 (1033)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ + |+||||||+||+++
T Consensus 95 ----~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~ 158 (287)
T 4f0f_A 95 ----PPRMVMEFVPCGDLYHRLLD---------KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQ 158 (287)
T ss_dssp ----TTEEEEECCTTCBHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEES
T ss_pred ----CCeEEEEecCCCCHHHHHhc---------ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEe
Confidence 23699999999999998853 345689999999999999999999999 8 99999999999998
Q ss_pred CCCc-----EEEeecccceecCCCCccccccccccccccccccccC--CCCCCcccchHHHHHHHHHHHhCCCCCCcccc
Q 042075 861 EEMI-----AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL--GSEVSINGDVYSYGILLLELVTRKKPTDIMFE 933 (1033)
Q Consensus 861 ~~~~-----~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~ 933 (1033)
.++. +||+|||+++..... .....||+.|+|||++. ...++.++||||+||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 233 (287)
T 4f0f_A 159 SLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233 (287)
T ss_dssp CCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred ccCCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence 8776 999999999854332 12244899999999984 45678999999999999999999999964322
Q ss_pred CCccHHHHHhh-hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 934 GDMNLHNFAKT-ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 934 ~~~~~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
........... .... ..+..+++++.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 234 GKIKFINMIREEGLRP------------------------------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp CHHHHHHHHHHSCCCC------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHhccCCCC------------------------------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 21111111110 0000 0011234568999999999999999999999999
Q ss_pred HHHH
Q 042075 1013 LQSI 1016 (1033)
Q Consensus 1013 L~~i 1016 (1033)
|+++
T Consensus 284 L~~l 287 (287)
T 4f0f_A 284 LSEL 287 (287)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9863
No 85
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-39 Score=366.89 Aligned_cols=254 Identities=18% Similarity=0.235 Sum_probs=205.5
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|++++++++||||+++++++ ...+..+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEEE
Confidence 46899999999999999999999999999999999866555567889999999999999999999995 4456899
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC--CCcEEE
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE--EMIAHV 867 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kL 867 (1033)
+||||+++|+|.+++.. ....+++.++..++.||+.||+|||++ ||+||||||+||+++. ++.+||
T Consensus 125 lv~E~~~gg~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAA---------EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTC---------TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEE
Confidence 99999999999999953 334689999999999999999999999 9999999999999974 568999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.......+.
T Consensus 193 ~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~ 268 (387)
T 1kob_A 193 IDFGLATKLNPDEIVK---VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWE 268 (387)
T ss_dssp CCCTTCEECCTTSCEE---EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCC
T ss_pred EecccceecCCCccee---eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC
Confidence 9999999775443222 234899999999999999999999999999999999999998632110 011111110000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. +.. .....++++.+++.+||+.||++|||+.|+++.
T Consensus 269 ~------~~~----------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 269 F------DED----------------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp C------CSS----------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred C------Ccc----------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 000 001124568999999999999999999999874
No 86
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-39 Score=363.80 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=200.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.+++.++||||+++++++ ...+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTPT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence 468999999999999999999999899999999987432 22235788999999999999999999995 4455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+ +|+|.+++. ....+++.++..++.|++.||+|||+. ||+||||||+||++++++.+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIV----------EKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp EEEEEECCC-CEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEE
T ss_pred EEEEEEECC-CCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEE
Confidence 789999999 789999884 335689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||++.......... ...||+.|+|||++.+..+ ++++||||+||++|||++|+.||+......
T Consensus 149 l~DFG~s~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---------- 215 (336)
T 3h4j_B 149 IADFGLSNIMTDGNFLK---TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---------- 215 (336)
T ss_dssp ECCSSCTBTTTTSBTTC---CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------
T ss_pred EEEeccceeccCCcccc---cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------
Confidence 99999998765443222 2349999999999988776 789999999999999999999996321110
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....+....... +...++++.+++.+||+.||++|||++|+++.
T Consensus 216 ----~~~~i~~~~~~~-------------------p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 216 ----LFKKVNSCVYVM-------------------PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ----CBCCCCSSCCCC-------------------CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ----HHHHHHcCCCCC-------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 000000000000 01123568899999999999999999999875
No 87
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-39 Score=368.50 Aligned_cols=257 Identities=21% Similarity=0.242 Sum_probs=202.5
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-----chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~ 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----SS 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence 357999999999999999999999999999999986421 12357789999999999999999999995 44
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
++..++||||+++++|.+++... ......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~ 168 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKR------ADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKEN 168 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSST
T ss_pred CCEEEEEEeCCCCCCHHHHHHHh------cccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCC
Confidence 56899999999999999888431 11234589999999999999999999999 9999999999999986554
Q ss_pred ---EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHH
Q 042075 865 ---AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNF 941 (1033)
Q Consensus 865 ---~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~ 941 (1033)
+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...+...
T Consensus 169 ~~~vkl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i 244 (351)
T 3c0i_A 169 SAPVKLGGFGVAIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI 244 (351)
T ss_dssp TCCEEECCCTTCEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHH
T ss_pred CCcEEEecCcceeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHH
Confidence 999999999877543322 122459999999999999999999999999999999999999986321 1011111
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
...... .... .....++++.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~------------~~~~----------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 245 IKGKYK------------MNPR----------------QWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHTCCC------------CCHH----------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCC------------CCcc----------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 110000 0000 001234568999999999999999999999863
No 88
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=368.20 Aligned_cols=276 Identities=24% Similarity=0.366 Sum_probs=211.3
Q ss_pred HHhhCCCCccceecccCceeEEEEEeC-----CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccc
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGILD-----EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGV 780 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 780 (1033)
....++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+.++++++||||++++++|
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--- 119 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC--- 119 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE---
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE---
Confidence 345678999999999999999999996 345899999997543 33457789999999999999999999995
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCcc--------------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDE--------------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP 846 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 846 (1033)
..++..++||||+++|+|.++++....... .......+++.+++.++.||++||+|||++ +
T Consensus 120 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ 194 (343)
T 1luf_A 120 --AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---K 194 (343)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred --ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 345578999999999999999965321100 001136799999999999999999999999 9
Q ss_pred cEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CC
Q 042075 847 IVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RK 925 (1033)
Q Consensus 847 ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~ 925 (1033)
|+||||||+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+
T Consensus 195 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 274 (343)
T 1luf_A 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 274 (343)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999986644332222233458899999999988899999999999999999999 99
Q ss_pred CCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 042075 926 KPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD 1005 (1033)
Q Consensus 926 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 1005 (1033)
.||..... ........... ... .+..++.++.+++.+||+.||++|||
T Consensus 275 ~p~~~~~~-----~~~~~~~~~~~--------~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 275 QPYYGMAH-----EEVIYYVRDGN--------ILA-------------------CPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CTTTTSCH-----HHHHHHHHTTC--------CCC-------------------CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CcCCCCCh-----HHHHHHHhCCC--------cCC-------------------CCCCCCHHHHHHHHHHcccCcccCCC
Confidence 99853211 11111100000 000 00123456899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 042075 1006 MTNVVHQLQSIKNILLG 1022 (1033)
Q Consensus 1006 ~~evl~~L~~i~~~~~~ 1022 (1033)
+.|+++.|+++.+...+
T Consensus 323 ~~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 323 FCSIHRILQRMCERAEG 339 (343)
T ss_dssp HHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 99999999998776543
No 89
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=368.74 Aligned_cols=275 Identities=23% Similarity=0.343 Sum_probs=215.5
Q ss_pred hCCCCccceecccCceeEEEEEeCC-------CCeEEEEEEeeccC-chhHHHHHHHHHHHHhc-CCCCceeEeeeeccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDE-------GKTIVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 780 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 780 (1033)
.++|.+.+.||+|+||+||+|++.. .++.||||+++... ....+++.+|+++++++ +||||++++++|
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee---
Confidence 4689999999999999999999743 34689999997543 33457789999999999 999999999995
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCc------cccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCC
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITRED------ETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKP 854 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (1033)
..++..++||||+++|+|.+++....... ........+++.++..++.||+.||+|||++ +|+||||||
T Consensus 145 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 145 --TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred --ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 44557899999999999999996532110 0011235699999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 042075 855 SNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFE 933 (1033)
Q Consensus 855 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~ 933 (1033)
+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987655443333333457899999999999999999999999999999999 9999853211
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQL 1013 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1013 (1033)
............. ..+..+++++.+++.+||+.||++|||++||++.|
T Consensus 300 --~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 300 --EELFKLLKEGHRM------------------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp --HHHHHHHHTTCCC------------------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHHcCCCC------------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111111100000 00112345689999999999999999999999999
Q ss_pred HHHHHHhhhch
Q 042075 1014 QSIKNILLGQR 1024 (1033)
Q Consensus 1014 ~~i~~~~~~~~ 1024 (1033)
+++......+.
T Consensus 348 ~~~~~~~~~~~ 358 (382)
T 3tt0_A 348 DRIVALTSNQE 358 (382)
T ss_dssp HHHHHHSCSCC
T ss_pred HHHHHHHhcCC
Confidence 99987765443
No 90
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2e-39 Score=363.85 Aligned_cols=264 Identities=19% Similarity=0.218 Sum_probs=208.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++.... .+.+.+|+++++++ +||||+++++++ ..++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFG-----PCGKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEE-----EETTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecCCcc
Confidence 4689999999999999999999988999999999875432 34688999999999 999999999995 345578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc----
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI---- 864 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---- 864 (1033)
++||||+ +++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDL---------CDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCc
Confidence 9999999 9999999953 245799999999999999999999999 9999999999999998887
Q ss_pred -EEEeecccceecCCCCccc-----cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccH
Q 042075 865 -AHVGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNL 938 (1033)
Q Consensus 865 -~kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~ 938 (1033)
+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~ 225 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TL 225 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cH
Confidence 9999999998764433211 112345999999999999999999999999999999999999999643211 11
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhh-hHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARIN-SKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIK 1017 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 1017 (1033)
........... ...... ....++ ++.+++..||+.||++||++++|.+.|+++.
T Consensus 226 ~~~~~~i~~~~------------------------~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 226 KERYQKIGDTK------------------------RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHHHHHHHHH------------------------HHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhh------------------------ccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 11111000000 000000 000123 7999999999999999999999999999887
Q ss_pred HHh
Q 042075 1018 NIL 1020 (1033)
Q Consensus 1018 ~~~ 1020 (1033)
+..
T Consensus 281 ~~~ 283 (330)
T 2izr_A 281 DRK 283 (330)
T ss_dssp HHT
T ss_pred HHc
Confidence 764
No 91
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.7e-39 Score=365.43 Aligned_cols=253 Identities=21% Similarity=0.252 Sum_probs=202.5
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 467999999999999999999999999999999997532 33456788999999999999999999995 45568
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC---Cc
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE---MI 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~---~~ 864 (1033)
.++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.
T Consensus 103 ~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 169 (362)
T ss_dssp EEEEECCCCSCBHHHHHT----------TCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCC
Confidence 899999999999999984 234689999999999999999999999 99999999999999865 45
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||++......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+......
T Consensus 170 ~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~~~ 245 (362)
T 2bdw_A 170 VKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAG 245 (362)
T ss_dssp EEECCCTTCBCCTTCCSC---CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred EEEeecCcceEecCCccc---ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhC
Confidence 999999999876543322 2245999999999999999999999999999999999999998532110 001111000
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... . .....+++++.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~------------~----------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 246 AYDYP------------S----------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCCCC------------T----------------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCCC------------c----------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0 0001124568999999999999999999999865
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=372.62 Aligned_cols=255 Identities=17% Similarity=0.175 Sum_probs=202.5
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||+||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEEG 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECSS
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EECC
Confidence 3567999999999999999999999999999999987543 23456789999999999999999999994 4566
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec---CCC
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD---EEM 863 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~---~~~ 863 (1033)
..++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++ +++
T Consensus 84 ~~~lv~E~~~gg~L~~~i~----------~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~ 150 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIV----------AREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGA 150 (444)
T ss_dssp EEEEEECCCBCCBHHHHHH----------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTC
T ss_pred EEEEEEEeCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCC
Confidence 8999999999999999984 335689999999999999999999999 999999999999998 567
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
.+||+|||+++......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.....
T Consensus 151 ~vkL~DFG~a~~~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~ 227 (444)
T 3soa_A 151 AVKLADFGLAIEVEGEQQAW--FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RLYQQIKA 227 (444)
T ss_dssp CEEECCCSSCBCCCTTCCBC--CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred cEEEccCceeEEecCCCcee--ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHh
Confidence 89999999998765433221 2245999999999999999999999999999999999999998532110 00111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
...... .+. ....++++.+++.+||+.||++|||+.|+++.
T Consensus 228 ~~~~~~-----~~~-----------------------~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 228 GAYDFP-----SPE-----------------------WDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TCCCCC-----TTT-----------------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCC-----ccc-----------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000 000 00123568899999999999999999999874
No 93
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.1e-39 Score=361.36 Aligned_cols=286 Identities=22% Similarity=0.321 Sum_probs=191.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||+||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence 468999999999999999999999899999999997543 23346788999999999999999999995 445689
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||++ |+|.+++..... ......+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTV----GNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHS----SSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhccc----cccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEEC
Confidence 99999997 599999853211 11234689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh--
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA-- 945 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-- 945 (1033)
|||+++......... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+.......
T Consensus 151 Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~ 227 (317)
T 2pmi_A 151 DFGLARAFGIPVNTF--SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGT 227 (317)
T ss_dssp CCSSCEETTSCCCCC--CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCS
T ss_pred cCccceecCCCcccC--CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 999998765332221 22348999999999876 46899999999999999999999999643211 1111111110
Q ss_pred CCcchhhhcccccCCCchhhhhc-cchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVH-GNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..+.....+.... ......... ..................++.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 228 PNESLWPSVTKLP-KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTTCGGGGGCT-TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CChhHhhhhhhhh-hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0011110000000 000000000 00000000000111234568999999999999999999998763
No 94
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-39 Score=356.38 Aligned_cols=260 Identities=23% Similarity=0.349 Sum_probs=206.0
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
...++|++.+.||+|+||+||+|.+. ++..||+|+++.... ..+++.+|++++++++||||+++++++ ..++.
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 93 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRP 93 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSS
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCC
Confidence 34568999999999999999999987 678899999975433 346789999999999999999999995 44567
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 161 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLRE---------MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 161 (283)
T ss_dssp EEEEECCCTTCBHHHHHHC---------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEE
T ss_pred eEEEEeccCCCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEE
Confidence 8999999999999999953 345689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||.++....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ..........
T Consensus 162 ~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~ 238 (283)
T 3gen_A 162 SDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGL 238 (283)
T ss_dssp CSTTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTC
T ss_pred cccccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhccc
Confidence 99999986643322 12222347788999999998889999999999999999998 99998632111 1111011000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
.. . .+...++.+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 239 ~~--------~----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 239 RL--------Y----------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CC--------C----------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC--------C----------------------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 00 0 0001234589999999999999999999999999998754
No 95
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.1e-39 Score=356.01 Aligned_cols=265 Identities=17% Similarity=0.168 Sum_probs=210.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|+.+++++ +|+|++++++++ ..+...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCcee
Confidence 467999999999999999999998899999999986433 235678999999999 899999999984 445588
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc----
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI---- 864 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~---- 864 (1033)
++||||+ +++|.++++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDL---------CGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 9999999953 234689999999999999999999999 9999999999999987775
Q ss_pred -EEEeecccceecCCCCcc-----ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc-
Q 042075 865 -AHVGDFGLATFLPLSHAQ-----TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN- 937 (1033)
Q Consensus 865 -~kL~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~- 937 (1033)
+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 228 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 228 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence 999999999876543321 1123345999999999999999999999999999999999999999643211100
Q ss_pred -HHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 042075 938 -LHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSI 1016 (1033)
Q Consensus 938 -~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 1016 (1033)
+........... .......+++++.+++.+||+.||++|||+++|++.|+++
T Consensus 229 ~~~~~~~~~~~~~---------------------------~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 229 KYERIGEKKQSTP---------------------------LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHHHHHHHHSC---------------------------HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhccCcc---------------------------HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 000000000000 0000112356799999999999999999999999999999
Q ss_pred HHHhh
Q 042075 1017 KNILL 1021 (1033)
Q Consensus 1017 ~~~~~ 1021 (1033)
.+...
T Consensus 282 ~~~~~ 286 (298)
T 1csn_A 282 LERLN 286 (298)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 87654
No 96
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=370.58 Aligned_cols=249 Identities=23% Similarity=0.289 Sum_probs=197.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.++||+|+||+||+|+++.+++.||+|+++... ....+.+.+|..+++++ +||||+++++++ ..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----ECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EEC
Confidence 467999999999999999999999999999999997532 23345678999999887 899999999994 455
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCE
Confidence 68999999999999999994 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc----HHHH
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN----LHNF 941 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~----~~~~ 941 (1033)
||+|||+|+....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ....
T Consensus 193 kL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~ 270 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270 (396)
T ss_dssp EECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH
T ss_pred EEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH
Confidence 9999999986332222 122345999999999999999999999999999999999999999643211100 0000
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM 1006 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 1006 (1033)
.... ... ....+...+.++.+++.+||+.||++||++
T Consensus 271 ~~~i--------~~~--------------------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 271 FQVI--------LEK--------------------QIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHH--------HHC--------------------CCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHHH--------hcc--------------------ccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0000 000 000111234568999999999999999996
No 97
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=365.21 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=200.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ...+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 357999999999999999999999999999999987432 23456788999999999999999999995 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||+++|+|.++++ ....+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQ----------QNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp EEEEEECCCTTEEHHHHHH----------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEE
Confidence 8999999999999999994 345689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCC---CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG---SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
|+|||+|+........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 156 L~DFG~a~~~~~~~~~---~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~ 230 (384)
T 4fr4_A 156 ITDFNIAAMLPRETQI---TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVH 230 (384)
T ss_dssp ECCCTTCEECCTTCCB---CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHH
T ss_pred EeccceeeeccCCCce---eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHH
Confidence 9999999876543322 23459999999999864 45899999999999999999999999632211 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD-MTNVVH 1011 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~ 1011 (1033)
... ..... .+...++++.+++.+||+.||++||+ ++++.+
T Consensus 231 ~~~---------~~~~~-------------------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 231 TFE---------TTVVT-------------------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHH---------HCCCC-------------------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHh---------hcccC-------------------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 100 00000 01112456899999999999999998 666553
No 98
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.9e-39 Score=363.26 Aligned_cols=260 Identities=23% Similarity=0.334 Sum_probs=204.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeE----EEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTI----VAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
.++|++.+.||+|+||+||+|++..+++. ||+|++.... ......+.+|+.++++++||||++++++|.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------ 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------
Confidence 35789999999999999999999877765 7777765332 233456788999999999999999999863
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
++..++||||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ~~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~ 153 (325)
T 3kex_A 86 GSSLQLVTQYLPLGSLLDHVRQ---------HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQ 153 (325)
T ss_dssp BSSEEEEEECCTTCBSHHHHHS---------SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSC
T ss_pred CCccEEEEEeCCCCCHHHHHHH---------ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCe
Confidence 3468899999999999999953 345688999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
+||+|||+++...............+|..|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 154 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~ 231 (325)
T 3kex_A 154 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLE 231 (325)
T ss_dssp EEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHH
T ss_pred EEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHH
Confidence 99999999998765544333344558889999999998899999999999999999999 99998642211 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
...... .+..++.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 232 ~~~~~~------------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 232 KGERLA------------------------------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTCBCC------------------------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred cCCCCC------------------------------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 100000 0001223478899999999999999999999999988643
No 99
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-39 Score=361.04 Aligned_cols=278 Identities=24% Similarity=0.377 Sum_probs=204.1
Q ss_pred HHHHhhCCCCccceecccCceeEEEEEeCC---CCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeecc
Q 042075 705 NLYNATDGFTSANLIGAGSFGSVYKGILDE---GKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSG 779 (1033)
Q Consensus 705 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 779 (1033)
++....++|.+.+.||+|+||.||+|.+.. +++.||+|+++.. .....+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 333455688999999999999999998764 4568999998743 23445778999999999999999999999765
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (1033)
.........++||||+++|+|.+++...... .....+++.++..++.||++||+|||++ +|+||||||+||++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli 180 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLE----TGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCML 180 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBT----TSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEE
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhh----cCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEE
Confidence 4433334569999999999999998532211 2346799999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccH
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNL 938 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~ 938 (1033)
++++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~ 258 (313)
T 3brb_A 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EM 258 (313)
T ss_dssp CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH
T ss_pred cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HH
Confidence 9999999999999987654433232333447889999999999999999999999999999999 88888532111 11
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKN 1018 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 1018 (1033)
.......... ..+..+++++.+++.+||+.||++|||++++++.|+++.+
T Consensus 259 ~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 259 YDYLLHGHRL------------------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HHHHHTTCCC------------------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCC------------------------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111100000 0011234568999999999999999999999999999987
Q ss_pred Hhh
Q 042075 1019 ILL 1021 (1033)
Q Consensus 1019 ~~~ 1021 (1033)
..+
T Consensus 309 ~lp 311 (313)
T 3brb_A 309 SLP 311 (313)
T ss_dssp HC-
T ss_pred hcC
Confidence 654
No 100
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-39 Score=363.46 Aligned_cols=274 Identities=23% Similarity=0.382 Sum_probs=195.7
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCe---EEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKT---IVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
...++|++.+.||+|+||+||+|++..++. .||||+++.. .....+++.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999999876664 7999998753 34456789999999999999999999999654321
Q ss_pred cC-CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 783 QG-NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 783 ~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
.. ....++||||+++|+|.+++..... ......+++.++..++.|++.||+|||++ ||+||||||+||++++
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~ 172 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRI----GENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAE 172 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECT
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhc----cccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcC
Confidence 11 1123899999999999999953211 11233689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHH
Q 042075 862 EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~ 940 (1033)
++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~ 250 (323)
T 3qup_A 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYN 250 (323)
T ss_dssp TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHH
Confidence 99999999999987655443333333447889999999999899999999999999999999 89998632211 1111
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
....... ...+..+++++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 251 ~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 YLIGGNR------------------------------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHTTCC------------------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhcCCC------------------------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1000000 0001123456899999999999999999999999999987654
No 101
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.2e-39 Score=355.02 Aligned_cols=261 Identities=28% Similarity=0.453 Sum_probs=194.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||+||+|++.. .||||+++... ....+.+.+|++++++++||||+++++++ ...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~------~~~ 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS------TAP 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE------CSS
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec------cCC
Confidence 35689999999999999999998753 49999987433 34457789999999999999999999974 234
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 160 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHA---------SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVK 160 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTT---------C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEE
T ss_pred ccEEEEEecCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEE
Confidence 57999999999999999953 345689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
|+|||+++...............||+.|+|||++. +..++.++||||||+++|||++|+.||......+........
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 240 (289)
T 3og7_A 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240 (289)
T ss_dssp ECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH
T ss_pred EccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc
Confidence 99999998654333222223345899999999986 567889999999999999999999999643221111111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIK 1017 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 1017 (1033)
.......... ...+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 241 ~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 241 GSLSPDLSKV---------------------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TSCCCCTTSS---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cccCcchhhc---------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1111111000 0123466899999999999999999999999999874
No 102
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=367.66 Aligned_cols=250 Identities=23% Similarity=0.285 Sum_probs=198.0
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 784 (1033)
..++|++.++||+|+||+||+|+++.+++.||||+++.. .....+.+.+|..+++.+ +||||+++++++ ..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~ 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----QT 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----Ee
Confidence 357899999999999999999999999999999999743 223446688999999998 799999999994 45
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
.+..|+||||+++|+|.++++ ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ 162 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQ----------KSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGH 162 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCC
Confidence 568999999999999999994 335689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||+|+....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......
T Consensus 163 ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~ 235 (353)
T 3txo_A 163 CKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEA 235 (353)
T ss_dssp EEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred EEEccccceeecccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 99999999985433222 12234599999999999988999999999999999999999999863211 111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM------TNVVH 1011 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~ 1011 (1033)
.. .... . .+....+++.+++.+||+.||++||++ +|+++
T Consensus 236 i~--------~~~~-~-------------------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 236 IL--------NDEV-V-------------------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HH--------HCCC-C-------------------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HH--------cCCC-C-------------------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 00 0000 0 000123458899999999999999998 66665
No 103
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=366.31 Aligned_cols=276 Identities=22% Similarity=0.296 Sum_probs=208.2
Q ss_pred hhCCCCccceecccCceeEEEEEe-----CCCCeEEEEEEeecc-CchhHHHHHHHHHHHHhc-CCCCceeEeeeecccc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGIL-----DEGKTIVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 781 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 781 (1033)
..++|++.+.||+|+||.||+|++ ..+++.||||+++.. .....+.+.+|+.+++++ +||||+++++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~---- 118 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC---- 118 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence 457899999999999999999997 346778999999743 233457889999999999 999999999995
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCc-------------cccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITRED-------------ETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIV 848 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 848 (1033)
...+..++||||+++|+|.+++....... ........+++.++..++.||+.||+|||++ ||+
T Consensus 119 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 119 -TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred -eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 34557899999999999999996532110 0001124589999999999999999999999 999
Q ss_pred eccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCC
Q 042075 849 HCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKP 927 (1033)
Q Consensus 849 HrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p 927 (1033)
||||||+||+++.++.+||+|||++................+|+.|+|||++.+..++.++|||||||++|||+| |+.|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999987654433333333447889999999988899999999999999999998 9999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
|...... ..+........... .+..+++++.+++.+||+.||++|||+.
T Consensus 275 ~~~~~~~-~~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ 323 (344)
T 1rjb_A 275 YPGIPVD-ANFYKLIQNGFKMD------------------------------QPFYATEEIYIIMQSCWAFDSRKRPSFP 323 (344)
T ss_dssp STTCCCS-HHHHHHHHTTCCCC------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cccCCcH-HHHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 8643211 11111111111000 0111245689999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 042075 1008 NVVHQLQSIKNILLGQ 1023 (1033)
Q Consensus 1008 evl~~L~~i~~~~~~~ 1023 (1033)
|+++.|+.+.+....+
T Consensus 324 ~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 324 NLTSFLGCQLADAEEA 339 (344)
T ss_dssp HHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999987765543
No 104
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.6e-39 Score=360.86 Aligned_cols=283 Identities=22% Similarity=0.277 Sum_probs=217.1
Q ss_pred CHHHHHHhhCCCCccceecccCceeEEEEEe-----CCCCeEEEEEEeeccCc-hhHHHHHHHHHHHHhc-CCCCceeEe
Q 042075 702 SYQNLYNATDGFTSANLIGAGSFGSVYKGIL-----DEGKTIVAVKVFNLLHH-GAFKSFIAECNTLKNI-RHRNLVKIL 774 (1033)
Q Consensus 702 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~ 774 (1033)
.........++|++.+.||+|+||+||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444445668999999999999999999985 34678999999975433 3456789999999999 799999999
Q ss_pred eeeccccccCCCceeEEEEcccCCchhhhcccCCCCccc------cccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 042075 775 TACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDET------EEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIV 848 (1033)
Q Consensus 775 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 848 (1033)
+++. ..+...++||||+++|+|.+++......... ......+++.++..++.|++.||+|||++ +|+
T Consensus 98 ~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~ 170 (316)
T 2xir_A 98 GACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 170 (316)
T ss_dssp EEEC----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEe----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 9963 3344689999999999999999653221000 00123389999999999999999999999 999
Q ss_pred eccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCC
Q 042075 849 HCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKP 927 (1033)
Q Consensus 849 HrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p 927 (1033)
||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p 250 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999987654443333333457889999999988899999999999999999998 9999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
|....... .+........... .+...++++.+++.+||+.||++|||+.
T Consensus 251 ~~~~~~~~-~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ 299 (316)
T 2xir_A 251 YPGVKIDE-EFCRRLKEGTRMR------------------------------APDYTTPEMYQTMLDCWHGEPSQRPTFS 299 (316)
T ss_dssp STTCCCSH-HHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CcccchhH-HHHHHhccCccCC------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 86432111 1111111100000 0011235689999999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 042075 1008 NVVHQLQSIKNILLG 1022 (1033)
Q Consensus 1008 evl~~L~~i~~~~~~ 1022 (1033)
|+++.|+++.+...+
T Consensus 300 ell~~L~~~~~~~~~ 314 (316)
T 2xir_A 300 ELVEHLGNLLQANAQ 314 (316)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhhhcc
Confidence 999999999876543
No 105
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-38 Score=372.15 Aligned_cols=354 Identities=18% Similarity=0.190 Sum_probs=278.0
Q ss_pred CeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEc
Q 042075 84 QRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRL 163 (1033)
Q Consensus 84 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 163 (1033)
.+++.|+++++++++. | .++.+++|++|+|++|++++ +| ++.+++|++|+|++|.+++. | ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 3688999999999975 4 79999999999999999997 45 99999999999999999964 4 899999999999
Q ss_pred ccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCC
Q 042075 164 SSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT 243 (1033)
Q Consensus 164 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 243 (1033)
++|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .++.+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 9999996 55 89999999999999999974 3 889999999999999766566 48899999999999999996
Q ss_pred CcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhh
Q 042075 244 IPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKL 323 (1033)
Q Consensus 244 ~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l 323 (1033)
+| +..+++|+.|++++|++++. + +..+++|++|++++|++++ +| +..+++|++|++++|++++.+ .+.+
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~~~-~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~--~~~l 253 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNITKL-D---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD--VSTL 253 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC--CTTC
T ss_pred ec--cccCCCCCEEECcCCcCCee-c---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC--HHHC
Confidence 55 88899999999999999864 3 4468899999999999987 55 788889999999999988754 3445
Q ss_pred ccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCC
Q 042075 324 QRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFV 403 (1033)
Q Consensus 324 ~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~ 403 (1033)
++|+.|+++.| +|+.|++++|.+.+.+| ++.++
T Consensus 254 ~~L~~L~l~~n---------------------------------------------~L~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 254 SKLTTLHCIQT---------------------------------------------DLLEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp TTCCEEECTTC---------------------------------------------CCSCCCCTTCTTCCEEE--CTTCT
T ss_pred CCCCEEeccCC---------------------------------------------CCCEEECCCCccCCccc--ccccc
Confidence 55555555443 24445566666655555 45667
Q ss_pred CCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCCCCcccEEecCC
Q 042075 404 KLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQSETLTIIDLSN 483 (1033)
Q Consensus 404 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 483 (1033)
+|+.|++++|.+.+.+|. ..++|+.|++++|. .|++|+|++|++++. + ++++++|+.|++++
T Consensus 287 ~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~~------------~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~ 348 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDC---QAAGITELDLSQNP------------KLVYLYLNNTELTEL-D--VSHNTKLKSLSCVN 348 (457)
T ss_dssp TCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTCT------------TCCEEECTTCCCSCC-C--CTTCTTCSEEECCS
T ss_pred cCCEEECCCCcccceecc---CCCcceEechhhcc------------cCCEEECCCCccccc-c--cccCCcCcEEECCC
Confidence 777777777777666664 34556666666551 367778888888763 3 77888888888888
Q ss_pred CccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccc
Q 042075 484 NNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLG 544 (1033)
Q Consensus 484 N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 544 (1033)
|++++ + ..+ ..|++++|.++|. +.+..|..+++++|+++|.+|..+.
T Consensus 349 N~l~~-l-------~~L-~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 349 AHIQD-F-------SSV-GKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp SCCCB-C-------TTG-GGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred CCCCC-c-------ccc-ccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 88874 2 223 6677888888764 3556677778888888877776543
No 106
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4e-39 Score=358.81 Aligned_cols=273 Identities=23% Similarity=0.321 Sum_probs=213.1
Q ss_pred hhCCCCccceecccCceeEEEEEe-----CCCCeEEEEEEeeccCc-hhHHHHHHHHHHHHhc-CCCCceeEeeeecccc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGIL-----DEGKTIVAVKVFNLLHH-GAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 781 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 781 (1033)
..++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~---- 96 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC---- 96 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE----
Confidence 346899999999999999999985 45678999999975433 3457789999999999 999999999995
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCc--------cccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITRED--------ETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLK 853 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlk 853 (1033)
..++..++||||+++|+|.+++....... ........+++.++..++.|++.||+|||++ +|+|||||
T Consensus 97 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 97 -TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp -CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred -ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 34557899999999999999996532110 0011234589999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccc
Q 042075 854 PSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMF 932 (1033)
Q Consensus 854 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~ 932 (1033)
|+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999999999987765443333333447889999999988899999999999999999999 999986432
Q ss_pred cCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 933 EGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... ............. .+...++++.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~-~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 253 VDS-KFYKMIKEGFRML------------------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp SSH-HHHHHHHHTCCCC------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chh-HHHHHhccCCCCC------------------------------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 111 1111111111000 001124568999999999999999999999999
Q ss_pred HHHHHHHh
Q 042075 1013 LQSIKNIL 1020 (1033)
Q Consensus 1013 L~~i~~~~ 1020 (1033)
|+++....
T Consensus 302 L~~~~~~~ 309 (313)
T 1t46_A 302 IEKQISES 309 (313)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99987643
No 107
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=366.22 Aligned_cols=289 Identities=24% Similarity=0.339 Sum_probs=205.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHH--HHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNT--LKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|+. +++.||||+++.... ..+..|.++ +..++||||+++++++..........
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999987 579999999875432 334445444 44589999999998765554556667
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC------CCCcEeccCCCCCeEecC
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC------QPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~ivHrDlkp~NIll~~ 861 (1033)
.++||||+++|+|.++++. ...++..+..++.||+.||+|||+.+ .++|+||||||+||+++.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred EEEEEecCCCCcHHHHHhh-----------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence 8999999999999999943 23488899999999999999999863 338999999999999999
Q ss_pred CCcEEEeecccceecCCCCc------cccccccccccccccccccCC-------CCCCcccchHHHHHHHHHHHhCCCCC
Q 042075 862 EMIAHVGDFGLATFLPLSHA------QTSSIFAKGSIGYIAPEYGLG-------SEVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 99999999999987653321 111223459999999999887 45678999999999999999998776
Q ss_pred CccccCCccHHHHHhhhCCc-c---hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC
Q 042075 929 DIMFEGDMNLHNFAKTALPD-H---VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM 1004 (1033)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 1004 (1033)
............+....... . ....+.... ..............+++++.+++.+||+.||++||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 304 (336)
T 3g2f_A 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK-----------QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARL 304 (336)
T ss_dssp STTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC-----------CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred CCccchhHHHHhhhcccCCCchHHHHHhhhcccc-----------cCCCCCcccccccchHHHHHHHHHHHhcCChhhCc
Confidence 43221111000000000000 0 000000000 00000011111224567899999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhchh
Q 042075 1005 DMTNVVHQLQSIKNILLGQRI 1025 (1033)
Q Consensus 1005 t~~evl~~L~~i~~~~~~~~~ 1025 (1033)
|++|+++.|+++...+....-
T Consensus 305 s~~e~l~~L~~ll~~~~~~~~ 325 (336)
T 3g2f_A 305 TAQXAEERMAELMMIWERNKS 325 (336)
T ss_dssp CHHHHHHHHHHHHHCCCC---
T ss_pred chHHHHHHHHHHHHHHHhccc
Confidence 999999999999987765543
No 108
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-39 Score=365.53 Aligned_cols=280 Identities=24% Similarity=0.293 Sum_probs=213.1
Q ss_pred hCCCCccceecccCceeEEEEE----eCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGI----LDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|+ ...+++.||||+++.......+.+.+|++++++++||||+++++++.. ...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCC
Confidence 3579999999999999999999 456889999999987666667789999999999999999999998642 345
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~ 166 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQR---------HRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHV 166 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEeecCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCE
Confidence 578999999999999999953 234689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||.++........ .......+|..|+|||++.+..++.++|||||||++|||++|+.||....... ...+...
T Consensus 167 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~~ 244 (327)
T 3lxl_A 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCE 244 (327)
T ss_dssp EECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC--
T ss_pred EEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhcccc
Confidence 99999999877544322 12222348888999999998889999999999999999999999975321100 0000000
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
..........+ ......+...+..+++++.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 245 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 245 RDVPALSRLLE---------------LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp --CCHHHHHHH---------------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred cccccHHHHHH---------------HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 00000000000 000011111222345679999999999999999999999999998865443
No 109
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=355.57 Aligned_cols=283 Identities=24% Similarity=0.282 Sum_probs=202.9
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-----chhHHHHHHHHHHHHhcC---CCCceeEeeeeccc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-----HGAFKSFIAECNTLKNIR---HRNLVKILTACSGV 780 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 780 (1033)
..++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999998899999999987432 122346678888877774 99999999997654
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
........++||||+. ++|.+++.. .....+++.++..++.||+.||+|||++ +|+||||||+||+++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDK--------APPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHT--------CCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhh--------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence 3333336799999996 599999964 2334489999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHH
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~ 940 (1033)
.++.+||+|||+++........ ....||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~ 230 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGK 230 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCCCS---GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHH
T ss_pred CCCCEEEeeCccccccCCCccc---CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 9999999999999866443322 22348999999999999999999999999999999999999986432211 1111
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
............+.. .......... . ...........+..+++.+++.+||+.||++|||+.|+++.
T Consensus 231 i~~~~~~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 231 IFDLIGLPPEDDWPR-DVSLPRGAFP---P-RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHCCCCTTTSCS-SCSSCGGGSC---C-CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCCCChhhccc-hhhccccccC---C-CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 111111000000000 0000000000 0 00000000111234678999999999999999999999863
No 110
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.6e-39 Score=356.20 Aligned_cols=279 Identities=21% Similarity=0.251 Sum_probs=201.1
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
...++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSE 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccC
Confidence 34578999999999999999999996 58999999987432 23346788999999999999999999994 455
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++ +|.+++.. ....+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+
T Consensus 92 ~~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~ 158 (311)
T 3niz_A 92 RCLTLVFEFMEK-DLKKVLDE---------NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGAL 158 (311)
T ss_dssp SCEEEEEECCSE-EHHHHHHT---------CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEEcCCCC-CHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCE
Confidence 689999999974 88888753 335589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||+++......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ........
T Consensus 159 kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~ 235 (311)
T 3niz_A 159 KLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSI 235 (311)
T ss_dssp EECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHH
T ss_pred EEccCcCceecCCCcccc--cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 999999998765332222 22348999999999876 568999999999999999999999997443222 22222211
Q ss_pred hCCcchhhhcccccCCCchhhhh-ccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAV-HGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
........+.. ... ...... ..................+++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 236 LGTPNPREWPQ--VQE-LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HCCCCTTTSGG--GTT-SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HCCCChHHhhh--hhc-cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11110000000 000 000000 00000000000011123456889999999999999999999986
No 111
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.7e-39 Score=352.22 Aligned_cols=261 Identities=22% Similarity=0.322 Sum_probs=197.9
Q ss_pred hhCCCCccceecccCceeEEEEEeCCC---CeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEG---KTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
..++|++.+.||+|+||.||+|.+..+ +..||+|+.+... ....+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 346899999999999999999998643 5679999987533 334567899999999999999999999852
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
++..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 154 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQV---------RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDC 154 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHH---------TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTE
T ss_pred cCccEEEEecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCC
Confidence 2467899999999999999953 334689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
+||+|||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 155 ~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~ 231 (281)
T 1mp8_A 155 VKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIE 231 (281)
T ss_dssp EEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEECccccccccCcccccc-cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHH
Confidence 9999999998765433221 122336789999999988899999999999999999997 99998643211 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
.... ...+..+++++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 232 ~~~~------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 232 NGER------------------------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TTCC------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCC------------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0000 0001123456899999999999999999999999999997654
No 112
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.1e-39 Score=362.32 Aligned_cols=249 Identities=24% Similarity=0.299 Sum_probs=197.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|+++.+++.||+|+++.. .....+.+.+|..+++++ +||||+++++++ ...
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeC
Confidence 35789999999999999999999999999999999753 233456688999999988 899999999994 455
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..|+||||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++++
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 149 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 149 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 68999999999999999994 234689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCc----cHHHH
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM----NLHNF 941 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~----~~~~~ 941 (1033)
||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. .....
T Consensus 150 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 227 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227 (345)
T ss_dssp EECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH
T ss_pred EEEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH
Confidence 9999999986432221 12234599999999999999999999999999999999999999964221110 00000
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM 1006 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 1006 (1033)
... +.... ...+...+.++.+++.+||+.||++||++
T Consensus 228 ~~~--------i~~~~--------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 228 FQV--------ILEKQ--------------------IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHH--------HHHCC--------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHH--------HHcCC--------------------CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 000 00000 00011234568999999999999999996
No 113
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=362.57 Aligned_cols=253 Identities=21% Similarity=0.242 Sum_probs=188.3
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||++++++| ...+..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCeE
Confidence 4568999999999999999999999899999999997543 336688999999999999999999995 345578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC---CCcE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE---EMIA 865 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~ 865 (1033)
++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 124 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVE----------KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECCCCSCBHHHHHTT----------CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCE
Confidence 999999999999999942 34589999999999999999999999 9999999999999975 8899
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||.........+.......
T Consensus 191 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~ 267 (349)
T 2w4o_A 191 KIADFGLSKIVEHQVLM---KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267 (349)
T ss_dssp EECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC
T ss_pred EEccCccccccCccccc---ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC
Confidence 99999999865433221 223489999999999999999999999999999999999999853221111111111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ...+. ..+.+.++.+++.+||+.||++|||+.|+++.
T Consensus 268 ~~-----~~~~~-----------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 268 YY-----FISPW-----------------------WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CC-----CCTTT-----------------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Cc-----cCCch-----------------------hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00000 01123568899999999999999999999863
No 114
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9.2e-39 Score=373.72 Aligned_cols=284 Identities=19% Similarity=0.162 Sum_probs=201.3
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-cCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~ 785 (1033)
..++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|+.++++++||||+++++++..... ...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 457899999999999999999999999999999999753 33445778899999999999999999999754321 334
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...|+||||+++ ++.+.+. ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~ 203 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 203 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CeEEEEEeCCCC-CHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCE
Confidence 567999999965 5666663 1388999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||+|+........ ....||+.|+|||++.+..|+.++||||+||++|||++|+.||...... ..+.......
T Consensus 204 kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~l 279 (464)
T 3ttj_A 204 KILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQL 279 (464)
T ss_dssp EECCCCCC-----CCCC-------CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EEEEEEeeeecCCCccc---CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc
Confidence 99999999876443222 2245899999999999999999999999999999999999998632111 1111111110
Q ss_pred CC----------cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LP----------DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~----------~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
-. ......++..............................+++.+++.+||+.||++|||++|+++.
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00111111100000000000000000000011122335678999999999999999999999875
No 115
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=352.56 Aligned_cols=268 Identities=24% Similarity=0.371 Sum_probs=208.5
Q ss_pred CCCccceecccCceeEEEEEeCCCC---eEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 712 GFTSANLIGAGSFGSVYKGILDEGK---TIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.|.+.++||+|+||+||+|++..++ ..||+|+++... ....+.+.+|+.++++++||||+++++++. ..+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML----PPEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe----cCCCC
Confidence 4556789999999999999975443 379999987533 344578899999999999999999999963 23345
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+.+|+|.+++.. ....+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRS---------PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp CEEEECCCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEecccCCCHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEe
Confidence 5899999999999999953 345688999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCc--cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 868 GDFGLATFLPLSHA--QTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||++|..|+...... ..........
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~ 244 (298)
T 3pls_A 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQG 244 (298)
T ss_dssp CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTT
T ss_pred CcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcC
Confidence 99999986543321 11222344789999999999999999999999999999999966654321111 1111111111
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhchh
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQRI 1025 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 1025 (1033)
... ..+..+++++.+++.+||+.||++|||++|+++.|+++.+...+..+
T Consensus 245 ~~~------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 245 RRL------------------------------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp CCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred CCC------------------------------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 000 00111235689999999999999999999999999999988876654
Q ss_pred h
Q 042075 1026 V 1026 (1033)
Q Consensus 1026 ~ 1026 (1033)
.
T Consensus 295 ~ 295 (298)
T 3pls_A 295 V 295 (298)
T ss_dssp C
T ss_pred h
Confidence 3
No 116
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-39 Score=356.41 Aligned_cols=247 Identities=21% Similarity=0.236 Sum_probs=201.4
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|+...+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ ...+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence 457999999999999999999999999999999997532 23346788999999999999999999994 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 146 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRK----------SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIK 146 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHH----------TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEE
Confidence 89999999999999999952 34689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......
T Consensus 147 L~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i- 215 (318)
T 1fot_A 147 ITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEKI- 215 (318)
T ss_dssp ECCCSSCEECSSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHH-
T ss_pred EeecCcceecCCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH-
Confidence 99999998754321 224599999999999999999999999999999999999999853211 1111100
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-----DMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1012 (1033)
...... . +....+++.+++.+||+.||++|| +++|+++.
T Consensus 216 -------~~~~~~-~-------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 216 -------LNAELR-F-------------------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -------HHCCCC-C-------------------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -------HhCCCC-C-------------------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 000000 0 001234588999999999999999 88888753
No 117
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.3e-39 Score=359.54 Aligned_cols=275 Identities=21% Similarity=0.345 Sum_probs=211.4
Q ss_pred hCCCCccceecccCceeEEEEEeC-------CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhc-CCCCceeEeeeeccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILD-------EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 780 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 780 (1033)
.++|++.+.||+|+||.||+|++. .+++.||||+++... ....+++.+|+++++++ +||||++++++|
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--- 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE---
Confidence 468999999999999999999975 356789999997543 34457789999999999 899999999995
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCcc------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCC
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDE------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKP 854 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (1033)
..++..++||||+++|+|.+++........ .......+++.++..++.||+.||+|||++ +|+||||||
T Consensus 111 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 111 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp --CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred --ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 345578999999999999999965321100 001234589999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 042075 855 SNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFE 933 (1033)
Q Consensus 855 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~ 933 (1033)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 999999999999999999987765443333333447889999999988889999999999999999999 9999853211
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQL 1013 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1013 (1033)
............ ...+..++.++.+++.+||+.||++|||+.|+++.|
T Consensus 266 --~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 266 --EELFKLLKEGHR------------------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp --HHHHHHHHHTCC------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHhcCCC------------------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 011111110000 000112345689999999999999999999999999
Q ss_pred HHHHHHhhhch
Q 042075 1014 QSIKNILLGQR 1024 (1033)
Q Consensus 1014 ~~i~~~~~~~~ 1024 (1033)
+++........
T Consensus 314 ~~l~~~~~~~~ 324 (334)
T 2pvf_A 314 DRILTLTTNEE 324 (334)
T ss_dssp HHHHHHHC---
T ss_pred HHHHhccccCc
Confidence 99988765444
No 118
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.1e-39 Score=349.00 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=204.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++. .++..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCEE
Confidence 457999999999999999999999899999999987433 334578899999999999999999999953 44578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 147 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (276)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEecCCCcHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEe
Confidence 99999999999999984 334689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||.+................||+.|+|||++.+..+ +.++||||||+++|||++|+.||.........+..+......
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (276)
T 2yex_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227 (276)
T ss_dssp CCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT
T ss_pred eCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc
Confidence 9999987643332222233458999999999988765 788999999999999999999997433222222222111000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
. ......++.+.+++.+||+.||++|||++|+++
T Consensus 228 ~------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 228 L------------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp S------------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c------------------------------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0 000112355889999999999999999999876
No 119
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-39 Score=373.69 Aligned_cols=260 Identities=18% Similarity=0.225 Sum_probs=204.7
Q ss_pred HHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccc
Q 042075 704 QNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGV 780 (1033)
Q Consensus 704 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 780 (1033)
.++....++|++.++||+|+||+||+|+++.+++.||+|+++... ....+.+.+|+.+++.++||||++++++|
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--- 138 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--- 138 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE---
Confidence 344456789999999999999999999999999999999987421 12234578999999999999999999995
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
..++..|+||||++||+|.++++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++
T Consensus 139 --~~~~~~~lV~E~~~gg~L~~~l~~-----------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~ 202 (410)
T 3v8s_A 139 --QDDRYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD 202 (410)
T ss_dssp --ECSSEEEEEECCCTTEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred --EECCEEEEEEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeEC
Confidence 455689999999999999999842 3588999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccCCCC----CCcccchHHHHHHHHHHHhCCCCCCccccCCc
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSE----VSINGDVYSYGILLLELVTRKKPTDIMFEGDM 936 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~ 936 (1033)
.++.+||+|||+|+......... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 203 ~~g~ikL~DFG~a~~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---- 277 (410)
T 3v8s_A 203 KSGHLKLADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---- 277 (410)
T ss_dssp TTSCEEECCCTTCEECCTTSEEE-CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS----
T ss_pred CCCCEEEeccceeEeeccCCccc-ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC----
Confidence 99999999999998765443221 22345999999999987655 8899999999999999999999986321
Q ss_pred cHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 042075 937 NLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPED--RMDMTNVVHQ 1012 (1033)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 1012 (1033)
............. . ...+.....++++.+++.+||+.+|++ ||+++||+++
T Consensus 278 -~~~~~~~i~~~~~-~-----------------------~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 278 -LVGTYSKIMNHKN-S-----------------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -HHHHHHHHHTHHH-H-----------------------CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -hhhHHHHHHhccc-c-----------------------ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 1111111000000 0 000000012356899999999999998 9999999875
No 120
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.1e-39 Score=355.05 Aligned_cols=264 Identities=24% Similarity=0.367 Sum_probs=214.3
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
-..++|++.+.||+|+||+||+|.+..+++.||+|+++... ...+.+.+|++++++++||||+++++++ ..++.
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 83 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPP 83 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSS
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCC
Confidence 35678999999999999999999999889999999987543 3457889999999999999999999995 44557
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++++|.+++.. .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l 152 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRE--------CNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152 (288)
T ss_dssp EEEEEECCTTEEHHHHHHH--------CCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEEEEcCCCCcHHHHHHh--------cccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEE
Confidence 8999999999999999954 2345689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||.+......... ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||...... ..........
T Consensus 153 ~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~ 229 (288)
T 3kfa_A 153 ADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY 229 (288)
T ss_dssp CCCCGGGTSCSSSSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC
T ss_pred ccCccceeccCCccc-cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccC
Confidence 999999876543322 2222347889999999988899999999999999999999 99998632111 1111111100
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
.. ..+..+++++.+++.+||+.||++|||++|+++.|+++.....
T Consensus 230 ~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 230 RM------------------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp CC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CC------------------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00 0011234568999999999999999999999999999876553
No 121
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.9e-39 Score=353.32 Aligned_cols=266 Identities=24% Similarity=0.378 Sum_probs=206.3
Q ss_pred CCCCccceecccCceeEEEEEeCCC---CeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEG---KTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.+|++.+.||+|+||+||+|++..+ ...||+|.++... ....+.+.+|+.++++++||||++++++| ...++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----~~~~~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEG 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE----CCSSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEE----EcCCC
Confidence 4688899999999999999997533 3468999987533 34457789999999999999999999986 34456
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++|+|.++++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+|
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~k 168 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVK 168 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHC---------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEE
Confidence 78999999999999999953 345688999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCcc--ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 867 VGDFGLATFLPLSHAQ--TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
|+|||.++........ .......+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||..... . .......
T Consensus 169 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~-~~~~~~~ 246 (298)
T 3f66_A 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-F-DITVYLL 246 (298)
T ss_dssp ECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-T-THHHHHH
T ss_pred ECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-H-HHHHHHh
Confidence 9999999876443221 11222347889999999998899999999999999999999 5555542211 1 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQ 1023 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 1023 (1033)
..... ..+..+++++.+++.+||+.||++|||++|+++.|+++.....++
T Consensus 247 ~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 247 QGRRL------------------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp TTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred cCCCC------------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 00000 000112356899999999999999999999999999998877654
Q ss_pred h
Q 042075 1024 R 1024 (1033)
Q Consensus 1024 ~ 1024 (1033)
.
T Consensus 297 ~ 297 (298)
T 3f66_A 297 H 297 (298)
T ss_dssp C
T ss_pred C
Confidence 3
No 122
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3e-39 Score=362.66 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=200.6
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhc-CCCCceeEeeeecccccc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 783 (1033)
...++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+..|..+++.+ +||||+++++++ .
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~-----~ 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF-----Q 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----E
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE-----E
Confidence 45678999999999999999999999999999999997532 23446678899999987 999999999994 4
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
..+..|+||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 89 ~~~~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g 155 (345)
T 1xjd_A 89 TKENLFFVMEYLNGGDLMYHIQ----------SCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDG 155 (345)
T ss_dssp CSSEEEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTS
T ss_pred eCCEEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCC
Confidence 5568999999999999999994 234689999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
.+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....
T Consensus 156 ~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~ 228 (345)
T 1xjd_A 156 HIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFH 228 (345)
T ss_dssp CEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred CEEEeEChhhhhcccCCCc--ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHH
Confidence 9999999999864332222 2234599999999999999999999999999999999999999863211 11111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT-NVV 1010 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl 1010 (1033)
...... ... +...++++.+++.+||+.||++||++. |++
T Consensus 229 ~i~~~~------~~~----------------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 229 SIRMDN------PFY----------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHHCC------CCC----------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHhCC------CCC----------------------CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 100000 000 001235588999999999999999997 664
No 123
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=354.36 Aligned_cols=259 Identities=27% Similarity=0.378 Sum_probs=199.4
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeE
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 790 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 790 (1033)
++|++.+.||+|+||+||+|++. ++.||||+++.. ...+.+.+|++++++++||||+++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 57889999999999999999985 688999998643 34578899999999999999999999853 24789
Q ss_pred EEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc-EEEee
Q 042075 791 VFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI-AHVGD 869 (1033)
Q Consensus 791 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~-~kL~D 869 (1033)
||||+++|+|.++++.. .....+++.+++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|
T Consensus 77 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D 149 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGA-------EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149 (307)
T ss_dssp EEECCTTCBHHHHHHCS-------SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred EEEcCCCCCHHHHHhcc-------CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence 99999999999999641 12235788999999999999999999932239999999999999998886 79999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDH 949 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 949 (1033)
||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||+...................
T Consensus 150 fg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~- 223 (307)
T 2eva_A 150 FGTACDIQTHM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP- 223 (307)
T ss_dssp CCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC-
T ss_pred ccccccccccc-----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC-
Confidence 99997653321 123489999999999999999999999999999999999999864321111110000000000
Q ss_pred hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042075 950 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLG 1022 (1033)
Q Consensus 950 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 1022 (1033)
.....+++.+.+++.+||+.||++|||++|+++.|+.+.+...+
T Consensus 224 -----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 -----------------------------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp -----------------------------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred -----------------------------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 00112245689999999999999999999999999999876643
No 124
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-39 Score=378.55 Aligned_cols=202 Identities=26% Similarity=0.351 Sum_probs=161.1
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||+||+|++..+++.||||++... .....+++.+|++++++++||||+++++++.....+...
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 347899999999999999999999999999999998643 233457789999999999999999999998655545567
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||+ +++|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 131 ~~~lv~e~~-~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~k 196 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFR----------TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVK 196 (458)
T ss_dssp CEEEEECCC-SEEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecc-ccchhhhcc----------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEe
Confidence 899999998 579999984 345689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCcc-------------------------cccccccccccccccccc-CCCCCCcccchHHHHHHHHH
Q 042075 867 VGDFGLATFLPLSHAQ-------------------------TSSIFAKGSIGYIAPEYG-LGSEVSINGDVYSYGILLLE 920 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~vl~e 920 (1033)
|+|||+|+........ ......+||+.|+|||++ .+..++.++|||||||++||
T Consensus 197 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~e 276 (458)
T 3rp9_A 197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276 (458)
T ss_dssp ECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred ecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHH
Confidence 9999999876432211 112234589999999976 55679999999999999999
Q ss_pred HHhC
Q 042075 921 LVTR 924 (1033)
Q Consensus 921 lltg 924 (1033)
|++|
T Consensus 277 lltg 280 (458)
T 3rp9_A 277 LLNM 280 (458)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9994
No 125
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.2e-39 Score=352.85 Aligned_cols=254 Identities=27% Similarity=0.389 Sum_probs=191.4
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc----hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH----GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|++. ++.||||+++.... ...+.+.+|++++++++||||+++++++ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKE 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecC
Confidence 468999999999999999999985 78899999864322 2346788999999999999999999995 345
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC----
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE---- 861 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---- 861 (1033)
+..++||||+++++|.+++. ...+++.++..++.|++.||+|||++...+|+||||||+||++++
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLS-----------GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp --CEEEEECCTTEEHHHHHT-----------SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred CceEEEEEcCCCCCHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 57899999999999999984 246899999999999999999999991112999999999999986
Q ss_pred ----CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 042075 862 ----EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN 937 (1033)
Q Consensus 862 ----~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~ 937 (1033)
++.+||+|||.++........ ...||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--- 220 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--- 220 (271)
T ss_dssp SCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH---
T ss_pred ccccCcceEEccCCccccccccccc----CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 678999999999865433222 234899999999998888999999999999999999999998632111
Q ss_pred HHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 042075 938 LHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSI 1016 (1033)
Q Consensus 938 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 1016 (1033)
..... ....... ...+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 221 -~~~~~-~~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 221 -AVAYG-VAMNKLA--------------------------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -HHHHH-HHTSCCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -HHHHh-hhcCCCC--------------------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00000 0000000 000112345689999999999999999999999999764
No 126
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-39 Score=365.93 Aligned_cols=266 Identities=24% Similarity=0.390 Sum_probs=200.3
Q ss_pred CCCccceecccCceeEEEEEeCCC---CeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 712 GFTSANLIGAGSFGSVYKGILDEG---KTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.|++.+.||+|+||+||+|++..+ +..||||.++.. .....+++.+|+.++++++||||++++++| ...++.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~----~~~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEE----CCCSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE----EcCCCC
Confidence 356778999999999999997532 346899998643 334567899999999999999999999986 334457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++|+|.++++. ....+++.++..++.||++||+|||++ +|+||||||+||++++++.+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp CEEEEECCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEE
T ss_pred eEEEEECCCCCCHHHHHhh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEE
Confidence 8999999999999999953 334578999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCcc--ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhh
Q 042075 868 GDFGLATFLPLSHAQ--TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||...... ........
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~ 311 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQ 311 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHT
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHc
Confidence 999999865433211 11122347889999999999999999999999999999999 67777532211 11111110
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhch
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQR 1024 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 1024 (1033)
... ...+..++.++.+++.+||+.||++|||++|+++.|+++...+.++.
T Consensus 312 ~~~------------------------------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 312 GRR------------------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp TCC------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred CCC------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 000 00011234568999999999999999999999999999998877665
Q ss_pred h
Q 042075 1025 I 1025 (1033)
Q Consensus 1025 ~ 1025 (1033)
.
T Consensus 362 ~ 362 (373)
T 3c1x_A 362 Y 362 (373)
T ss_dssp B
T ss_pred e
Confidence 3
No 127
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-38 Score=358.59 Aligned_cols=259 Identities=21% Similarity=0.293 Sum_probs=200.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY------ 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 782 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||++++++|.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457899999999999999999999899999999997533 3355789999999999999999999998743221
Q ss_pred ----------------------------------------------cCCCceeEEEEcccCCchhhhcccCCCCcccccc
Q 042075 783 ----------------------------------------------QGNDFKALVFEFMHNRSLEEWLHPITREDETEEA 816 (1033)
Q Consensus 783 ----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 816 (1033)
..+...++||||+++++|.++++.. ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-------~~ 157 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR-------CS 157 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC-------CS
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc-------cC
Confidence 1122479999999999999999642 12
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeecccceecCCCCcc----------cccc
Q 042075 817 PRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQ----------TSSI 886 (1033)
Q Consensus 817 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~----------~~~~ 886 (1033)
....++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ ....
T Consensus 158 ~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T 3qd2_B 158 LEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHT 234 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccc
Confidence 34457778899999999999999999 9999999999999999999999999999887554221 1122
Q ss_pred ccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhh
Q 042075 887 FAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLA 966 (1033)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 966 (1033)
...||+.|+|||++.+..++.++||||+||++|||++|..|+... ........ ..
T Consensus 235 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~--------~~---------- 289 (332)
T 3qd2_B 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVR--------NL---------- 289 (332)
T ss_dssp SCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHH--------TT----------
T ss_pred ccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhh--------cc----------
Confidence 345999999999999999999999999999999999987764210 00000000 00
Q ss_pred hccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 967 VHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..........+++.+++.+||+.||++|||++|+++.
T Consensus 290 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 290 ---------KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp ---------CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ---------CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 0001112334567899999999999999999999863
No 128
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=360.80 Aligned_cols=275 Identities=19% Similarity=0.209 Sum_probs=213.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|++++++++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 467999999999999999999998899999999987666666788999999999999999999999975321 2344789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++|+|.+++.... .....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLK------DKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp EEEECCTTCBHHHHHHHHH------TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEe
Confidence 9999999999999995311 1346689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccc-------cccccccccccccccccCCCC---CCcccchHHHHHHHHHHHhCCCCCCccccCCccHH
Q 042075 870 FGLATFLPLSHAQT-------SSIFAKGSIGYIAPEYGLGSE---VSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 870 fG~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~ 939 (1033)
||.+.......... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||+..........
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 257 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence 99987653221110 011233799999999987654 78999999999999999999999864322222221
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
........ .+.....+.++.+++.+||+.||++|||++|+++.|+.++..
T Consensus 258 ~~~~~~~~------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 258 LAVQNQLS------------------------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HHHHCC--------------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred HHhhccCC------------------------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 11111000 000011235689999999999999999999999999998776
Q ss_pred hhhch
Q 042075 1020 LLGQR 1024 (1033)
Q Consensus 1020 ~~~~~ 1024 (1033)
.+++.
T Consensus 308 ~~~~~ 312 (317)
T 2buj_A 308 APGQH 312 (317)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 65544
No 129
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.9e-39 Score=355.56 Aligned_cols=255 Identities=21% Similarity=0.348 Sum_probs=201.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCC-------eEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGK-------TIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
.++|++.+.||+|+||+||+|++..++ +.||+|+++.......+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV---- 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC----
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE----
Confidence 357899999999999999999987665 579999998766666788999999999999999999999953
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
.++..++||||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 83 -~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 83 -CGDENILVQEFVKFGSLDTYLKK---------NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIRE 149 (289)
T ss_dssp -CTTCCEEEEECCTTCBHHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEEC
T ss_pred -eCCCCEEEEECCCCCCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecC
Confidence 45578999999999999999953 334589999999999999999999999 99999999999999988
Q ss_pred Cc--------EEEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCcccc
Q 042075 863 MI--------AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFE 933 (1033)
Q Consensus 863 ~~--------~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~ 933 (1033)
+. +||+|||.+...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 86 999999998754321 11237899999999887 6789999999999999999996555432111
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQL 1013 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1013 (1033)
... ....... ..... ...++++.+++.+||+.||++|||++|+++.|
T Consensus 224 ~~~-~~~~~~~--~~~~~------------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 224 SQR-KLQFYED--RHQLP------------------------------APKAAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp HHH-HHHHHHT--TCCCC------------------------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hHH-HHHHhhc--cCCCC------------------------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 110 0000000 00000 00123478999999999999999999999999
Q ss_pred HHHHHHh
Q 042075 1014 QSIKNIL 1020 (1033)
Q Consensus 1014 ~~i~~~~ 1020 (1033)
+++....
T Consensus 271 ~~l~~p~ 277 (289)
T 4fvq_A 271 NSLFTPD 277 (289)
T ss_dssp HTCC---
T ss_pred HHhcCCC
Confidence 9886543
No 130
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5e-39 Score=369.35 Aligned_cols=283 Identities=18% Similarity=0.198 Sum_probs=204.6
Q ss_pred hhCCCCccceeccc--CceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 709 ATDGFTSANLIGAG--SFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
..++|++.++||+| +||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++. .
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~ 97 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----A 97 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----E
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----E
Confidence 35689999999999 99999999999999999999997543 344567889999999999999999999953 4
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
++..++||||+++|+|.+++.. .....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 166 (389)
T 3gni_B 98 DNELWVVTSFMAYGSAKDLICT--------HFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGK 166 (389)
T ss_dssp TTEEEEEEECCTTCBHHHHHHH--------TCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCC
T ss_pred CCEEEEEEEccCCCCHHHHHhh--------hcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCC
Confidence 5589999999999999999954 2235589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCc-----cccccccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 042075 865 AHVGDFGLATFLPLSHA-----QTSSIFAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN 937 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~ 937 (1033)
+||+|||.+........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~- 245 (389)
T 3gni_B 167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM- 245 (389)
T ss_dssp EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-
T ss_pred EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-
Confidence 99999999875422211 111122358999999999987 6799999999999999999999999964322211
Q ss_pred HHHHHhhhCCcchhhhcccccCCC----------------chhhhhc--cchhhhhhhhhhHHHHHHHHHHHHhhccCCC
Q 042075 938 LHNFAKTALPDHVVDIVDSTLLSD----------------DEDLAVH--GNQRQRQARINSKIECLVAMARIGVACSMES 999 (1033)
Q Consensus 938 ~~~~~~~~~~~~~~~~~d~~l~~~----------------~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 999 (1033)
.........+ ...+...... ....... .................+++.+++.+||+.|
T Consensus 246 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 321 (389)
T 3gni_B 246 LLEKLNGTVP----CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321 (389)
T ss_dssp HHHC------------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred HHHHhcCCCC----ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence 1111111100 0000000000 0000000 0000000011122334567999999999999
Q ss_pred CCCCCCHHHHHHH
Q 042075 1000 PEDRMDMTNVVHQ 1012 (1033)
Q Consensus 1000 P~~RPt~~evl~~ 1012 (1033)
|++|||++|+++.
T Consensus 322 P~~Rpta~ell~h 334 (389)
T 3gni_B 322 PDARPSASTLLNH 334 (389)
T ss_dssp TTTSCCHHHHTTS
T ss_pred cccCCCHHHHhcC
Confidence 9999999999865
No 131
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.4e-40 Score=382.43 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=210.3
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~ 257 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPI 257 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCcc
Confidence 4567889999999999999999997 57889999998543 34578999999999999999999999863 3468
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++|+|.++++. .....+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||+
T Consensus 258 ~lv~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 326 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKS--------DEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIA 326 (454)
T ss_dssp EEEECCCTTCBHHHHHHS--------HHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEEC
T ss_pred EEEEeecCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEe
Confidence 999999999999999953 2234688999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++....... .......+|..|+|||++....++.++|||||||++|||++ |+.||...... .........
T Consensus 327 DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~-- 401 (454)
T 1qcf_A 327 DFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERG-- 401 (454)
T ss_dssp STTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHT--
T ss_pred eCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC--
Confidence 9999987643221 11222336789999999988899999999999999999999 99998632111 111111000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQ 1023 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 1023 (1033)
.+.+.+..+++++.+++.+||+.||++|||+++|++.|+++......+
T Consensus 402 ----------------------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~ 449 (454)
T 1qcf_A 402 ----------------------------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449 (454)
T ss_dssp ----------------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCS
T ss_pred ----------------------------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccc
Confidence 001111234567999999999999999999999999999886654433
No 132
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.6e-39 Score=358.28 Aligned_cols=275 Identities=26% Similarity=0.356 Sum_probs=207.4
Q ss_pred CCCCccceecccCceeEEEEE----eCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGI----LDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 458899999999999999999 45689999999987433 3345788999999999999999999999653 223
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 165 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPK---------NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 165 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEEeCCCCcHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCE
Confidence 568999999999999999953 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||++......... .......+|..|+|||++.+..++.++||||+|+++|||++|+.|+.... ..+...
T Consensus 166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~ 239 (302)
T 4e5w_A 166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKM 239 (302)
T ss_dssp EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHH
T ss_pred EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhc
Confidence 99999999877554322 22223448889999999998899999999999999999999999864221 111110
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIK 1017 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 1017 (1033)
..+....... .. .........+...+..+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 240 ~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 240 IGPTHGQMTV--------TR---LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HCSCCGGGHH--------HH---HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCcccccCH--------HH---HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000000000 00 00000000111112234567999999999999999999999999999874
No 133
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.7e-39 Score=370.77 Aligned_cols=264 Identities=19% Similarity=0.185 Sum_probs=206.3
Q ss_pred HHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeecc
Q 042075 703 YQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSG 779 (1033)
Q Consensus 703 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 779 (1033)
+.++....++|++.++||+|+||+||+|+++.+++.||||+++... ......+.+|..+++.++||||++++++|
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-- 143 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF-- 143 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE--
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--
Confidence 3444456789999999999999999999999999999999997422 12234488999999999999999999995
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (1033)
..++..|+||||+++|+|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+
T Consensus 144 ---~~~~~~~lV~Ey~~gg~L~~~l~~---------~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl 208 (437)
T 4aw2_A 144 ---QDDNNLYLVMDYYVGGDLLTLLSK---------FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILM 208 (437)
T ss_dssp ---ECSSEEEEEECCCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ---eeCCEEEEEEecCCCCcHHHHHHH---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeE
Confidence 455689999999999999999953 245689999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCccccC
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPTDIMFEG 934 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~ 934 (1033)
+.++.+||+|||+|+......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 209 ~~~g~vkL~DFGla~~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~ 287 (437)
T 4aw2_A 209 DMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287 (437)
T ss_dssp CTTSCEEECCCTTCEECCTTSCEE-CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred cCCCCEEEcchhhhhhcccCCCcc-cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh
Confidence 999999999999998765443322 22245999999999986 567999999999999999999999999632111
Q ss_pred CccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 042075 935 DMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPED--RMDMTNVVHQ 1012 (1033)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 1012 (1033)
..+....... . ...-+. . ....++++.+++.+||..+|++ ||+++|+++.
T Consensus 288 -~~~~~i~~~~----~-~~~~p~---~-------------------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 288 -ETYGKIMNHK----E-RFQFPT---Q-------------------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -HHHHHHHTHH----H-HCCCCS---S-------------------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -HHHHhhhhcc----c-cccCCc---c-------------------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0111111000 0 000000 0 0012355889999999998888 9999998864
No 134
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.2e-39 Score=381.44 Aligned_cols=258 Identities=25% Similarity=0.406 Sum_probs=209.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++.... ..+++.+|+.++++++||||++++++|. ..+..+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~-----~~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCCcEE
Confidence 4578899999999999999999998899999999975433 4578999999999999999999999963 445789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++|+|.++++. .....+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 293 lv~E~~~~g~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRE--------CNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp EEEECCTTCBHHHHHHH--------SCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred EEEEccCCCCHHHHHHh--------cCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEee
Confidence 99999999999999964 2335689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..........
T Consensus 362 FG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~-- 436 (495)
T 1opk_A 362 FGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY-- 436 (495)
T ss_dssp TTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC--
T ss_pred cccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--
Confidence 999987644322 22222346789999999998899999999999999999999 99998632111 1111111000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIK 1017 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 1017 (1033)
+...+..+++++.+++.+||+.||++|||+.||++.|+.+.
T Consensus 437 ----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 437 ----------------------------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----------------------------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 00111234567899999999999999999999999998864
No 135
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=360.15 Aligned_cols=260 Identities=22% Similarity=0.348 Sum_probs=200.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEE----EEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIV----AVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
.++|++.+.||+|+||+||+|++..+++.| |+|.++.. .....+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 467999999999999999999998777654 66666432 33455789999999999999999999999642
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
+..++|+||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred -CCceEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCC
Confidence 247899999999999999953 345689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~ 233 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE 233 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH
Confidence 99999999987654443333333447889999999999999999999999999999999 99998643211 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
.... ...+..++.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 234 ~~~~------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 234 KGER------------------------------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp TTCC------------------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred cCCC------------------------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1100 000111245689999999999999999999999999998754
No 136
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-38 Score=350.34 Aligned_cols=267 Identities=19% Similarity=0.253 Sum_probs=207.5
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+...... .+++.+|++++++++|++++..+.++ ...++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWC----GAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEE----EEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeee----cCCCCce
Confidence 45789999999999999999999988999999998764332 24578899999999998888887775 3445678
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCCcE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEMIA 865 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~ 865 (1033)
++||||+ +++|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+||++ ++++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCE
T ss_pred EEEEEcc-CCCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeE
Confidence 9999999 9999999853 234689999999999999999999999 99999999999999 788999
Q ss_pred EEeecccceecCCCCccc-----cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCc--cH
Q 042075 866 HVGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM--NL 938 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~--~~ 938 (1033)
||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh
Confidence 999999998765433211 12234589999999999999999999999999999999999999964322111 11
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKN 1018 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 1018 (1033)
............ ......+++++.+++.+||+.||++|||++++++.|+++.+
T Consensus 228 ~~~~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 228 ERISEKKMSTPI---------------------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHHHHHHHSCH---------------------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhhcccccchh---------------------------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 111110000000 00001224679999999999999999999999999999987
Q ss_pred Hhh
Q 042075 1019 ILL 1021 (1033)
Q Consensus 1019 ~~~ 1021 (1033)
...
T Consensus 281 ~~~ 283 (296)
T 4hgt_A 281 RQG 283 (296)
T ss_dssp HHT
T ss_pred HhC
Confidence 664
No 137
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.9e-38 Score=369.92 Aligned_cols=146 Identities=21% Similarity=0.376 Sum_probs=78.1
Q ss_pred CCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceee
Q 042075 107 LSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFS 186 (1033)
Q Consensus 107 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 186 (1033)
+++++.|++++|.+. .+| .+..+++|++|+|++|.+++.. . ++++++|++|++++|.+++..| ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDIT-P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCch-h-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 455666666666665 244 2555666666666666665332 2 5666666666666666654333 56666666666
Q ss_pred ecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcccc
Q 042075 187 VSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQ 265 (1033)
Q Consensus 187 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 265 (1033)
+++|++++..+ +.++++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+..+ +.++++|+.|++++|.++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 66666654332 5556666666666666553 22 25555555555553 33332211 444444444444444443
No 138
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.2e-39 Score=364.73 Aligned_cols=210 Identities=29% Similarity=0.339 Sum_probs=181.0
Q ss_pred CCCCCHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-----CCCcee
Q 042075 698 FPNISYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-----HRNLVK 772 (1033)
Q Consensus 698 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 772 (1033)
...+++.+.....++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+..|+++++++. ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44566666667788999999999999999999999989999999998743 233466788999999996 999999
Q ss_pred EeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccC
Q 042075 773 ILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDL 852 (1033)
Q Consensus 773 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDl 852 (1033)
+++++. ..+..++||||+ +++|.+++.. .....+++.++..++.||+.||+|||++ ||+||||
T Consensus 101 ~~~~~~-----~~~~~~lv~e~~-~~~L~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl 163 (360)
T 3llt_A 101 YHGKFM-----YYDHMCLIFEPL-GPSLYEIITR--------NNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDL 163 (360)
T ss_dssp EEEEEE-----ETTEEEEEECCC-CCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ccceee-----ECCeeEEEEcCC-CCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence 999954 345889999999 9999999954 2334589999999999999999999999 9999999
Q ss_pred CCCCeEecC-------------------------CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCc
Q 042075 853 KPSNVLLDE-------------------------EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSI 907 (1033)
Q Consensus 853 kp~NIll~~-------------------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 907 (1033)
||+||+++. ++.+||+|||+|+....... ...||+.|+|||++.+..++.
T Consensus 164 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~ 238 (360)
T 3llt_A 164 KPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-----SIINTRQYRAPEVILNLGWDV 238 (360)
T ss_dssp SGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC-----SCCSCGGGCCHHHHTTCCCCT
T ss_pred CcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc-----CccCcccccCcHHHcCCCCCC
Confidence 999999975 78999999999986543221 234899999999999999999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCc
Q 042075 908 NGDVYSYGILLLELVTRKKPTDI 930 (1033)
Q Consensus 908 ~sDvwSlG~vl~elltg~~p~~~ 930 (1033)
++||||+||++|||++|+.||..
T Consensus 239 ~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 239 SSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp THHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccchHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999964
No 139
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8e-39 Score=362.76 Aligned_cols=255 Identities=22% Similarity=0.238 Sum_probs=194.1
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||+||+|++..+++.||||+++.... ..+.+.+|+.++++++||||+++++++ ...+..
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~ 91 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHL 91 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEE
Confidence 35689999999999999999999999999999999975432 236788999999999999999999995 345589
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc--EE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI--AH 866 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--~k 866 (1033)
++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ ||+||||||+||+++.++. +|
T Consensus 92 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~k 158 (361)
T 3uc3_A 92 AIIMEYASGGELYERIC----------NAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLK 158 (361)
T ss_dssp EEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEE
T ss_pred EEEEEeCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEE
Confidence 99999999999999984 334689999999999999999999999 9999999999999987765 99
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcc-cchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSIN-GDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||+++........ ....||+.|+|||++.+..++.+ +||||+||++|||++|+.||....... .+.......
T Consensus 159 l~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~ 234 (361)
T 3uc3_A 159 ICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRI 234 (361)
T ss_dssp ECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHH
T ss_pred EeecCccccccccCCC---CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHH
Confidence 9999999754322221 22349999999999988887655 899999999999999999996432221 122211111
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... .. +.....++++.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~------~~--------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 235 LSVKY------SI--------------------PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HTTCC------CC--------------------CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hcCCC------CC--------------------CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 11000 00 0000123568899999999999999999999875
No 140
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-38 Score=349.40 Aligned_cols=267 Identities=19% Similarity=0.253 Sum_probs=211.0
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|++..+++.||||++..... .+++.+|+.++++++|++++..+.++ ...++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~----~~~~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWC----GAEGDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEE----EEETTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccc----cCCCCce
Confidence 35789999999999999999999988999999999875432 35688999999999998887777765 2345578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCCcE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEMIA 865 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~ 865 (1033)
++||||+ +++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 147 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCE
T ss_pred EEEEEec-CCCHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeE
Confidence 9999999 9999999953 334689999999999999999999999 99999999999999 488899
Q ss_pred EEeecccceecCCCCccc-----cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCC--ccH
Q 042075 866 HVGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGD--MNL 938 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~--~~~ 938 (1033)
||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+
T Consensus 148 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 3uzp_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh
Confidence 999999998765443211 1223458999999999999999999999999999999999999997432111 111
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKN 1018 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 1018 (1033)
............ ......+++++.+++.+||+.||++|||++++++.|+++..
T Consensus 228 ~~~~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 228 ERISEKKMSTPI---------------------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHHHHHHHSCH---------------------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhcccccCCch---------------------------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 111110000000 00011234668999999999999999999999999999987
Q ss_pred Hhh
Q 042075 1019 ILL 1021 (1033)
Q Consensus 1019 ~~~ 1021 (1033)
...
T Consensus 281 ~~~ 283 (296)
T 3uzp_A 281 RQG 283 (296)
T ss_dssp HTT
T ss_pred hcC
Confidence 654
No 141
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=368.61 Aligned_cols=288 Identities=19% Similarity=0.221 Sum_probs=214.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.++||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCee
Confidence 357999999999999999999999999999999997533 2335678899999999999999999998642 223467
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe----cCCCc
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL----DEEMI 864 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----~~~~~ 864 (1033)
++||||+++|+|.++++.. .....+++.++..++.||+.||+|||++ +|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~-------~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 154 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEP-------SNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSV 154 (396)
T ss_dssp EEEECCCTTEEHHHHTTSG-------GGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEE
T ss_pred EEEEecCCCCCHHHHHHhh-------hcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCcee
Confidence 9999999999999999641 1223489999999999999999999999 99999999999999 77788
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCC--------CCCCcccchHHHHHHHHHHHhCCCCCCccccCCc
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG--------SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM 936 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~ 936 (1033)
+||+|||+++......... ...||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 155 ~kL~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 231 (396)
T 4eut_A 155 YKLTDFGAARELEDDEQFV---SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231 (396)
T ss_dssp EEECCGGGCEECCCGGGSS---CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT
T ss_pred EEEecCCCceEccCCCccc---cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc
Confidence 9999999998765433222 2448999999998764 5678899999999999999999999964332222
Q ss_pred cHHHHHhh--hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 042075 937 NLHNFAKT--ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQ 1014 (1033)
Q Consensus 937 ~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1014 (1033)
....+... ..+......+........ + ..................+.+++.+||+.||++||+++|+++.++
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 232 NKEVMYKIITGKPSGAISGVQKAENGPI-D-----WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp CHHHHHHHHHSCCTTCCEEEECSTTCCE-E-----EESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred hHHHHHHHhcCCCcccchhheeccCCCc-c-----cCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 22211111 111111100000000000 0 000000111122456778999999999999999999999999998
Q ss_pred HHHHH
Q 042075 1015 SIKNI 1019 (1033)
Q Consensus 1015 ~i~~~ 1019 (1033)
++.+.
T Consensus 306 ~il~~ 310 (396)
T 4eut_A 306 DILHR 310 (396)
T ss_dssp HHHTC
T ss_pred HHhhc
Confidence 88654
No 142
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.4e-39 Score=371.86 Aligned_cols=207 Identities=24% Similarity=0.315 Sum_probs=172.5
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .....+++.+|++++++++||||+++++++.........
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 357899999999999999999999999999999999753 333457889999999999999999999997654444446
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||++ ++|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~-~~L~~~~~----------~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~k 169 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFK----------TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVK 169 (432)
T ss_dssp CEEEEEECCS-EEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecCC-cCHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEE
Confidence 7899999985 69999994 345689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCcc--------------------cccccccccccccccccc-CCCCCCcccchHHHHHHHHHHHhCC
Q 042075 867 VGDFGLATFLPLSHAQ--------------------TSSIFAKGSIGYIAPEYG-LGSEVSINGDVYSYGILLLELVTRK 925 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~vl~elltg~ 925 (1033)
|+|||+|+........ .......||+.|+|||++ ....++.++||||+||++|||++|.
T Consensus 170 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~ 249 (432)
T 3n9x_A 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249 (432)
T ss_dssp ECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred EccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence 9999999876543221 112335589999999985 5567999999999999999999976
Q ss_pred CCCC
Q 042075 926 KPTD 929 (1033)
Q Consensus 926 ~p~~ 929 (1033)
.||.
T Consensus 250 ~p~~ 253 (432)
T 3n9x_A 250 QSHI 253 (432)
T ss_dssp TTTC
T ss_pred cccc
Confidence 6654
No 143
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.2e-39 Score=361.96 Aligned_cols=278 Identities=22% Similarity=0.282 Sum_probs=213.6
Q ss_pred HHHhhCCCCccceecccCceeEEEEEeCCCC-----eEEEEEEeeccC-chhHHHHHHHHHHHHhc-CCCCceeEeeeec
Q 042075 706 LYNATDGFTSANLIGAGSFGSVYKGILDEGK-----TIVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACS 778 (1033)
Q Consensus 706 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 778 (1033)
..-..++|++.+.||+|+||.||+|.+..++ +.||+|+++... ....+.+.+|+.+++++ +||||++++++|
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~- 119 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC- 119 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-
Confidence 3345678999999999999999999987655 479999997543 33457789999999999 899999999995
Q ss_pred cccccCCCceeEEEEcccCCchhhhcccCCCCcc----ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCC
Q 042075 779 GVDYQGNDFKALVFEFMHNRSLEEWLHPITREDE----TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKP 854 (1033)
Q Consensus 779 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp 854 (1033)
..++..++||||+++|+|.+++........ .......+++.++..++.|++.||+|||++ +|+||||||
T Consensus 120 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 120 ----THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp ----CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ----ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 445578999999999999999964211000 001134689999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 042075 855 SNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFE 933 (1033)
Q Consensus 855 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~ 933 (1033)
+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 999999999999999999986644333222233447889999999988899999999999999999999 9999864321
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQL 1013 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 1013 (1033)
.. ............. .+..+++.+.+++.+||+.||++|||+.|+++.|
T Consensus 273 ~~-~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 273 NS-KFYKLVKDGYQMA------------------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp SH-HHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hH-HHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 11 1111111111000 0011235689999999999999999999999999
Q ss_pred HHHHHHhhh
Q 042075 1014 QSIKNILLG 1022 (1033)
Q Consensus 1014 ~~i~~~~~~ 1022 (1033)
+++......
T Consensus 322 ~~~~~~~~~ 330 (333)
T 2i1m_A 322 QEQAQEDRR 330 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhhhc
Confidence 998775543
No 144
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.7e-39 Score=349.79 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=203.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++ ..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTDIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCeEE
Confidence 45799999999999999999999999999999999876555678899999999999999999999995 4455789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCCcEE
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEMIAH 866 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 866 (1033)
+||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~ 149 (277)
T 3f3z_A 83 LVMELCTGGELFERVV----------HKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLK 149 (277)
T ss_dssp EEEECCCSCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEE
T ss_pred EEEeccCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEE
Confidence 9999999999999984 345689999999999999999999999 99999999999999 7888999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||.+.......... ...||+.|+|||++.+. ++.++||||+|+++|||++|+.||......+ ..........
T Consensus 150 l~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~ 224 (277)
T 3f3z_A 150 LIDFGLAARFKPGKMMR---TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREGTF 224 (277)
T ss_dssp ECCCTTCEECCTTSCBC---CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC
T ss_pred EEecccceeccCccchh---ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCC
Confidence 99999998765443322 23489999999998654 8999999999999999999999986321110 0111100000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. .... .....++++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~-------------~~~~---------------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 225 T-------------FPEK---------------DWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp C-------------CCHH---------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred C-------------CCch---------------hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000 001234568999999999999999999999864
No 145
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=361.43 Aligned_cols=248 Identities=20% Similarity=0.238 Sum_probs=196.0
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeEEEEcc
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 795 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 795 (1033)
.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++ ...+..++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEEeCC
Confidence 56899999999999999989999999999876656667899999999999999999999995 3455789999999
Q ss_pred cCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe--cCCCcEEEeecccc
Q 042075 796 HNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL--DEEMIAHVGDFGLA 873 (1033)
Q Consensus 796 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll--~~~~~~kL~DfG~a 873 (1033)
++++|.+++.. ....+++.++..++.||+.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 169 ~~~~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRIID---------ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 99999998852 345689999999999999999999999 99999999999999 56789999999999
Q ss_pred eecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhh
Q 042075 874 TFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDI 953 (1033)
Q Consensus 874 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1033)
+......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.......+..
T Consensus 237 ~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~----- 307 (373)
T 2x4f_A 237 RRYKPREKLK---VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWDL----- 307 (373)
T ss_dssp EECCTTCBCC---CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCS-----
T ss_pred eecCCccccc---cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCC-----
Confidence 9775443322 234899999999999999999999999999999999999998632111 1111111111000
Q ss_pred cccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 954 VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 954 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... .....++++.+++.+||+.||++|||+.|+++.
T Consensus 308 -------~~~----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 308 -------EDE----------------EFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp -------CSG----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------Chh----------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 001124568999999999999999999999983
No 146
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-38 Score=353.63 Aligned_cols=276 Identities=23% Similarity=0.337 Sum_probs=204.1
Q ss_pred HHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc--CCCCceeEeeeeccccccC
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI--RHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~~ 784 (1033)
....++|++.+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++.... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT-GS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CC
Confidence 344578999999999999999999986 8899999986432 24455666666655 9999999999865331 12
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC-----CCCcEeccCCCCCeEe
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC-----QPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivHrDlkp~NIll 859 (1033)
....++||||+++|+|.++++. ..+++.++..++.|++.||+|||+++ .++|+||||||+||++
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill 175 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKS-----------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred CCceEEEEeccCCCcHHHHhhc-----------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence 2578999999999999999942 35899999999999999999999752 3489999999999999
Q ss_pred cCCCcEEEeecccceecCCCCcccc--ccccccccccccccccCCCCCCcc------cchHHHHHHHHHHHhCC------
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQTS--SIFAKGSIGYIAPEYGLGSEVSIN------GDVYSYGILLLELVTRK------ 925 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------sDvwSlG~vl~elltg~------ 925 (1033)
+.++.+||+|||+++.......... .....||+.|+|||++.+..++.+ +|||||||++|||++|.
T Consensus 176 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~ 255 (337)
T 3mdy_A 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255 (337)
T ss_dssp CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccc
Confidence 9999999999999987644332211 122459999999999988766665 99999999999999994
Q ss_pred ----CCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCC
Q 042075 926 ----KPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPE 1001 (1033)
Q Consensus 926 ----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 1001 (1033)
.||.........+............. .. ........++++++.+++.+||+.||+
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~-------------~~~~~~~~~~~~~l~~li~~~l~~dP~ 314 (337)
T 3mdy_A 256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLR--------PS-------------FPNRWSSDECLRQMGKLMTECWAHNPA 314 (337)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCC--------CC-------------CCGGGGGSHHHHHHHHHHHHHSCSSGG
T ss_pred ccccccHhhhcCCCCchhhhHHHHhhhccC--------cc-------------ccccchhhHHHHHHHHHHHHhhhhChh
Confidence 44433222222222221111100000 00 000011235678899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 042075 1002 DRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 1002 ~RPt~~evl~~L~~i~~~~ 1020 (1033)
+|||+.||++.|+++.+..
T Consensus 315 ~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 315 SRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp GSCCHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHHhhc
Confidence 9999999999999998754
No 147
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.8e-39 Score=355.47 Aligned_cols=273 Identities=19% Similarity=0.208 Sum_probs=199.0
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++. .+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-----ID 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ET
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-----eC
Confidence 3578999999999999999999999899999999987532 223477889999999999999999999953 45
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++++|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRR----------QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred CeEEEEEEecCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 588999999999999999942 34689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||++.......... .....|++.|+|||++.+..++.++||||||+++|||++|+.||...... .........
T Consensus 174 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~ 250 (309)
T 2h34_A 174 YLVDFGIASATTDEKLTQ-LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQA 250 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSC
T ss_pred EEecCccCcccccccccc-ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccC
Confidence 999999998654432211 12234899999999999999999999999999999999999998632111 111111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHHhhhch
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-DMTNVVHQLQSIKNILLGQR 1024 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~i~~~~~~~~ 1024 (1033)
.+. .. .....+++++.+++.+||+.||++|| +++++++.|+++.+......
T Consensus 251 ~~~-~~---------------------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~ 302 (309)
T 2h34_A 251 IPR-PS---------------------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDR 302 (309)
T ss_dssp CCC-GG---------------------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred CCC-cc---------------------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence 000 00 00112235689999999999999999 99999999998876665555
Q ss_pred hhcccc
Q 042075 1025 IVSNMQ 1030 (1033)
Q Consensus 1025 ~~~~~~ 1030 (1033)
..+.++
T Consensus 303 ~~~~~~ 308 (309)
T 2h34_A 303 ATDILR 308 (309)
T ss_dssp ------
T ss_pred hhhhhh
Confidence 444433
No 148
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-39 Score=361.67 Aligned_cols=265 Identities=20% Similarity=0.309 Sum_probs=197.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 468999999999999999999998899999999997542 233467889999999999999999999865332 1122
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.++++ ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVH----------TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEEEEECCCEEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEE
T ss_pred ccEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEE
Confidence 4599999999999999994 234689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........... .....
T Consensus 157 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~~~ 235 (311)
T 3ork_A 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-HVRED 235 (311)
T ss_dssp ECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHCC
T ss_pred EeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HhcCC
Confidence 9999999876443221 122224489999999999999999999999999999999999999863211110000 00000
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVV-HQLQSIK 1017 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl-~~L~~i~ 1017 (1033)
... . .......++++.+++.+||+.||++||++.+++ +.+.++.
T Consensus 236 ~~~-~---------------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 236 PIP-P---------------------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CCC-H---------------------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CCC-c---------------------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 000 0 000012345689999999999999999655544 5565554
No 149
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.5e-39 Score=348.58 Aligned_cols=255 Identities=21% Similarity=0.290 Sum_probs=202.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|++. ++.||||+++... ....+.+.+|+.++++++||||+++++++... ..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCC
Confidence 457999999999999999999985 7889999997543 34456799999999999999999999996432 2357
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--cEeccCCCCCeEecCCCcE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP--IVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~~~~~~ 865 (1033)
.++||||+++|+|.++++. .....+++.++..++.|++.||+|||++ + |+||||||+||++++++.+
T Consensus 84 ~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~ 152 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHE--------GTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTA 152 (271)
T ss_dssp CEEEEECCTTCBHHHHHHS--------CSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCE
T ss_pred eEeeecccCCCcHHHHHhh--------cccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcce
Confidence 8999999999999999964 2233689999999999999999999998 7 9999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCc---ccchHHHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSI---NGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~ 942 (1033)
+|+|||++...... ...||+.|+|||++.+..++. ++|||||||++|||++|+.||......+ ......
T Consensus 153 ~l~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~ 224 (271)
T 3kmu_A 153 RISMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-IGMKVA 224 (271)
T ss_dssp EEEGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-HHHHHH
T ss_pred eEEeccceeeeccc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-HHHHHH
Confidence 99999887643221 134899999999988765554 7999999999999999999986321111 000110
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKN 1018 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 1018 (1033)
....... .+..+++++.+++.+||+.||++|||++|+++.|+++++
T Consensus 225 ~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 225 LEGLRPT------------------------------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HSCCCCC------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred hcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0000000 011234568999999999999999999999999998854
No 150
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=359.84 Aligned_cols=276 Identities=22% Similarity=0.375 Sum_probs=213.3
Q ss_pred hCCCCccceecccCceeEEEEEe----CCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGIL----DEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.......+.+.+|++++++++||||+++++++.. ...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCC
Confidence 45689999999999999999994 55789999999987666667889999999999999999999998642 223
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 184 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 184 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHH---------STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEE
T ss_pred CceEEEEECCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcE
Confidence 468999999999999999953 234589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQT-SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++|..||..... .+......
T Consensus 185 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~ 261 (326)
T 2w1i_A 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGN 261 (326)
T ss_dssp EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCT
T ss_pred EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhcc
Confidence 999999998775443221 11223477889999999888899999999999999999999998752210 00000000
Q ss_pred hCCcc-----hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 945 ALPDH-----VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 945 ~~~~~-----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
..... +.+.+.. ..+...+..+++++.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 262 DKQGQMIVFHLIELLKN------------------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TCCTHHHHHHHHHHHHT------------------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHhhc------------------CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00000 0000000 001111223456799999999999999999999999999999886
Q ss_pred hh
Q 042075 1020 LL 1021 (1033)
Q Consensus 1020 ~~ 1021 (1033)
..
T Consensus 324 l~ 325 (326)
T 2w1i_A 324 MA 325 (326)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 151
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-38 Score=346.52 Aligned_cols=258 Identities=26% Similarity=0.355 Sum_probs=207.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|.+. +++.||+|+++.... ..+.+.+|++++++++||||+++++++ ..++..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeE
Confidence 457899999999999999999997 678899999976443 236789999999999999999999995 3455789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++++|.++++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 80 lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp EEECCCTTCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECC
T ss_pred EEEeCCCCCcHHHHHhh---------CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcc
Confidence 99999999999999953 334689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
||.+........ .......++..|+|||++.+..++.++||||+|+++|||++ |+.||..... ..........
T Consensus 148 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~i~~~ 221 (267)
T 3t9t_A 148 FGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTG 221 (267)
T ss_dssp TTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTT
T ss_pred cccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHHHhcC
Confidence 999986543221 11222347889999999988889999999999999999999 8999863211 1111100000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
. ... .+...+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 222 ~-----~~~----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 222 F-----RLY----------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp C-----CCC----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-----cCC----------------------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0 000 0001235589999999999999999999999999999763
No 152
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=356.83 Aligned_cols=272 Identities=23% Similarity=0.295 Sum_probs=199.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++. ..+.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRR 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCe
Confidence 3689999999999999999999998999999999864332 23467889999999999999999999953 4557
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++++|.++++ ....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||
T Consensus 77 ~~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 143 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDR----------YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKL 143 (311)
T ss_dssp EEEEEECCSEEHHHHHHH----------TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEEeCCCchHHHHHh----------hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEE
Confidence 899999999999999884 335689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||.+.......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ... ......
T Consensus 144 ~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~-~~~~~~ 219 (311)
T 4agu_A 144 CDFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLY-LIRKTL 219 (311)
T ss_dssp CCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH-HHHHHH
T ss_pred eeCCCchhccCccccc--CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHH-HHHHHh
Confidence 9999998765433222 12348999999999876 678999999999999999999999996432211 111 111110
Q ss_pred Cc---chhhhcc------cccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PD---HVVDIVD------STLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~---~~~~~~d------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ....... ......... ...... .....++++.+++.+||+.||++|||++|+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 220 GDLIPRHQQVFSTNQYFSGVKIPDPED------MEPLEL---KFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CSCCHHHHHHHHTCGGGTTCCCCCCSS------CCCHHH---HCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccccccccCcCCCccc------cchhhh---hcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 0000000 000000000 000000 011234568999999999999999999999864
No 153
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-38 Score=348.57 Aligned_cols=261 Identities=21% Similarity=0.332 Sum_probs=204.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCC---CCeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDE---GKTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
..++|++.+.||+|+||+||+|++.. ++..||+|+++.. .....+++.+|+.++++++||||+++++++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 83 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------ 83 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC------
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc------
Confidence 35689999999999999999999753 3456999998754 3344578899999999999999999999853
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
++..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 151 (281)
T 3cc6_A 84 EEPTWIIMELYPYGELGHYLER---------NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPEC 151 (281)
T ss_dssp SSSCEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTE
T ss_pred CCCCEEEEecCCCCCHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCc
Confidence 2346899999999999999953 335589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
+||+|||.+.......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .......
T Consensus 152 ~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~ 228 (281)
T 3cc6_A 152 VKLGDFGLSRYIEDEDYYK-ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLE 228 (281)
T ss_dssp EEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHH
T ss_pred EEeCccCCCcccccccccc-cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHh
Confidence 9999999998764433221 122347889999999988899999999999999999998 99998632211 1111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
..... ..+..+++.+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 229 ~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 229 KGDRL------------------------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp HTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCC------------------------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 10000 000112356899999999999999999999999999987654
No 154
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.3e-38 Score=350.05 Aligned_cols=274 Identities=22% Similarity=0.275 Sum_probs=196.9
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
++|++.+.||+|+||+||+|++ .+++.||+|+++.... ...+.+.+|++++++++||||+++++++ ..++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence 5799999999999999999999 4789999999864332 2346788999999999999999999995 445689
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++ +|.+++.. ....+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDV---------CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCSE-EHHHHHHT---------STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCC-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999975 99998853 335689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+.........
T Consensus 143 Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 219 (288)
T 1ob3_A 143 DFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGT 219 (288)
T ss_dssp CTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred ECccccccCccccc--cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCC
Confidence 99999865432221 122348999999999876 458999999999999999999999996432111 11111111100
Q ss_pred cc--hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 948 DH--VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 948 ~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
.. ........ ............ ... .......++++.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 220 PNSKNWPNVTEL-PKYDPNFTVYEP-LPW---ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTTSTTGGGS-TTCCTTCCCCCC-CCG---GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CChhhchhhhcc-cccccccccccC-ccH---HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00000000 000000000000 000 0001123456889999999999999999999876
No 155
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-38 Score=358.86 Aligned_cols=247 Identities=19% Similarity=0.215 Sum_probs=201.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ ..++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcCC
Confidence 357999999999999999999999999999999997432 23456788999999999999999999994 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 181 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRR----------IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHH----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEE
Confidence 89999999999999999952 34689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .........
T Consensus 182 L~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~ 251 (350)
T 1rdq_E 182 VTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIV 251 (350)
T ss_dssp ECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH
T ss_pred EcccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHHHHH
Confidence 99999998764322 22358999999999999999999999999999999999999986321 111111100
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD-----MTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 1012 (1033)
.... . .+...+.++.+++.+||+.||++||+ ++|+++.
T Consensus 252 --------~~~~-~-------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 252 --------SGKV-R-------------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --------HCCC-C-------------------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --------cCCC-C-------------------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 0000 0 00112356899999999999999998 7777653
No 156
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.6e-39 Score=360.92 Aligned_cols=271 Identities=24% Similarity=0.364 Sum_probs=209.5
Q ss_pred CCccceecccCceeEEEEEe----CCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 713 FTSANLIGAGSFGSVYKGIL----DEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 713 y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
|++.+.||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.. .....
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CCCce
Confidence 48999999999999988764 3478999999997543 3445778999999999999999999999743 22457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~-----------~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPR-----------HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEEEECCCTTCBHHHHGGG-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecccCCcHHHHHhh-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEE
Confidence 8999999999999999943 3489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||.++........ .......+|..|+|||++.+..++.++||||+||++|||++|+.||....... ... ...
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~--~~~ 250 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LEL--IGI 250 (318)
T ss_dssp CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHH--HCS
T ss_pred CCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hhh--hcc
Confidence 999999987554322 12223347888999999998899999999999999999999999985321110 000 000
Q ss_pred Ccc------hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 947 PDH------VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 947 ~~~------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
... ..+.++. ..+...+..+++++.+++.+||+.||++|||++|+++.|+++.+.+
T Consensus 251 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 251 AQGQMTVLRLTELLER------------------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCHHHHHHHHHHHHHT------------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHhc------------------ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 000 0000000 0111112234567999999999999999999999999999999887
Q ss_pred hhc
Q 042075 1021 LGQ 1023 (1033)
Q Consensus 1021 ~~~ 1023 (1033)
.++
T Consensus 313 ~~~ 315 (318)
T 3lxp_A 313 QGQ 315 (318)
T ss_dssp HC-
T ss_pred ccC
Confidence 654
No 157
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.1e-38 Score=352.72 Aligned_cols=253 Identities=18% Similarity=0.215 Sum_probs=203.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCch------hHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHG------AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 85 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-----E 85 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE-----e
Confidence 45799999999999999999999989999999999753321 356789999999999999999999995 4
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
..+..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~ 152 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLA----------QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKN 152 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHH----------TCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTT
T ss_pred cCCEEEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCC
Confidence 4568999999999999999994 234688999999999999999999999 999999999999999887
Q ss_pred ----cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHH
Q 042075 864 ----IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 864 ----~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~ 939 (1033)
.+||+|||++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 153 ~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~ 224 (321)
T 2a2a_A 153 IPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----Q 224 (321)
T ss_dssp SSSCCEEECCCTTCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----H
T ss_pred CCcCCEEEccCccceecCccccc---cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----H
Confidence 7999999999876543322 223489999999999999999999999999999999999999853211 1
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
........ ... ..... .....++.+.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~~~i~~--------~~~-~~~~~---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 225 ETLANITS--------VSY-DFDEE---------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHT--------TCC-CCCHH---------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHh--------ccc-ccChh---------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 000 00000 001223568999999999999999999999873
No 158
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-38 Score=345.83 Aligned_cols=253 Identities=21% Similarity=0.254 Sum_probs=203.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCCE
Confidence 468999999999999999999999999999999997532 33457788999999999999999999995 44557
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc---
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI--- 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--- 864 (1033)
.++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 80 ~~~v~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCc
Confidence 899999999999999884 335689999999999999999999999 9999999999999986654
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||.+.......... ...||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .........
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~ 222 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAG 222 (284)
T ss_dssp EEECCCTTCEECCSSCBCC---CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred EEEeeceeeEEcccCcccc---CCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhc
Confidence 9999999998765443322 234899999999999999999999999999999999999998532111 001111110
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... .+ .....++++.+++.+||+.||++|||++|+++.
T Consensus 223 ~~~~~-----~~-----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 223 AYDYP-----SP-----------------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CCCCC-----TT-----------------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cccCC-----ch-----------------------hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000 00 001123568999999999999999999999874
No 159
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2e-38 Score=346.96 Aligned_cols=265 Identities=26% Similarity=0.403 Sum_probs=208.6
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|.+. +++.||||+++.... ..+.+.+|++++++++||||+++++++. .+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 82 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPI 82 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCc
Confidence 3468899999999999999999987 677899999875432 3578899999999999999999999853 2357
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.+++.. .....+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||+
T Consensus 83 ~~v~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~ 151 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKT--------PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 151 (279)
T ss_dssp EEEEECCTTCBHHHHTTS--------HHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCCHHHHHhc--------CCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEEC
Confidence 999999999999999953 1234689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||.+.......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... ...........
T Consensus 152 Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~ 228 (279)
T 1qpc_A 152 DFGLARLIEDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYR 228 (279)
T ss_dssp CCTTCEECSSSCEEC-CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC
T ss_pred CCcccccccCccccc-ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccC
Confidence 999998765433221 222346789999999988889999999999999999999 99998632111 11111100000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhchh
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQRI 1025 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 1025 (1033)
. ..+..+++++.+++.+||+.||++|||++++++.|+++.....++.-
T Consensus 229 --------~----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~ 276 (279)
T 1qpc_A 229 --------M----------------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQ 276 (279)
T ss_dssp --------C----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-----
T ss_pred --------C----------------------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCCC
Confidence 0 00012245689999999999999999999999999999887766543
No 160
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.9e-38 Score=352.75 Aligned_cols=269 Identities=22% Similarity=0.298 Sum_probs=201.6
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
..++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+++.+|+.++++++||||+++++++. .+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~ 104 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----ED 104 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ET
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cC
Confidence 345799999999999999999999889999999998742 2344577899999999999999999999954 34
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++++|.+++... ......+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~ 175 (310)
T 2wqm_A 105 NELNIVLELADAGDLSRMIKHF------KKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVV 175 (310)
T ss_dssp TEEEEEEECCCSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CcEEEEEecCCCCCHHHHHHHh------cccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCE
Confidence 5789999999999999998531 12345689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||++.......... ....|++.|+|||++.+..++.++||||||+++|||++|+.||..... .........
T Consensus 176 kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~ 250 (310)
T 2wqm_A 176 KLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKI 250 (310)
T ss_dssp EECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHH
T ss_pred EEEeccceeeecCCCccc--cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHh
Confidence 999999998654332211 223489999999999999999999999999999999999999853211 111111110
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLG 1022 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 1022 (1033)
..... +... ....++++.+++.+||+.||++|||++||++.|+++++....
T Consensus 251 ~~~~~-----~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 251 EQCDY-----PPLP---------------------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp HTTCS-----CCCC---------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred hcccC-----CCCc---------------------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 00000 0000 001235689999999999999999999999999999876643
No 161
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-38 Score=358.57 Aligned_cols=250 Identities=19% Similarity=0.232 Sum_probs=200.2
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 784 (1033)
..++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+..|..+++.+ +||+|+++++++ ..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----EC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----Ec
Confidence 3568999999999999999999999889999999997532 23456788999999988 899999999984 45
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
.+..|+||||++||+|.++++. ...+++.++..++.||+.||+|||++ ||+||||||+||+++.++.
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ 159 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQ----------VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 159 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCc
Confidence 5689999999999999999942 34689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......
T Consensus 160 vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~ 232 (353)
T 2i0e_A 160 IKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQS 232 (353)
T ss_dssp EEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH
T ss_pred EEEEeCCcccccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-----HHHHHHH
Confidence 99999999986432222 1223459999999999999999999999999999999999999986321 1111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD-----MTNVVH 1011 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 1011 (1033)
.. .... . .+...++++.+++.+||+.||++||+ ++|+++
T Consensus 233 i~--------~~~~-~-------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 233 IM--------EHNV-A-------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HH--------HCCC-C-------------------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HH--------hCCC-C-------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00 0000 0 00112356899999999999999996 466654
No 162
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-38 Score=366.24 Aligned_cols=204 Identities=25% Similarity=0.344 Sum_probs=164.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~ 785 (1033)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.+++++. ||||+++++++.. ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TTS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CCC
Confidence 457899999999999999999999999999999998542 3344567889999999996 9999999999642 234
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...|+||||++ ++|.++++. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~ 148 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA-----------NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHV 148 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH-----------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEecccC-cCHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCE
Confidence 47899999997 699998842 4688999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCc-------------------cccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCC
Q 042075 866 HVGDFGLATFLPLSHA-------------------QTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRK 925 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~ 925 (1033)
||+|||+|+....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+
T Consensus 149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 9999999987533111 111223459999999999876 67899999999999999999999
Q ss_pred CCCCc
Q 042075 926 KPTDI 930 (1033)
Q Consensus 926 ~p~~~ 930 (1033)
+||..
T Consensus 229 ~pf~~ 233 (388)
T 3oz6_A 229 PIFPG 233 (388)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 99864
No 163
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.2e-39 Score=363.54 Aligned_cols=292 Identities=18% Similarity=0.212 Sum_probs=209.4
Q ss_pred HHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 704 QNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 704 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
.+.....++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.....
T Consensus 20 g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 99 (364)
T 3qyz_A 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI 99 (364)
T ss_dssp -CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred cEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence 334445678999999999999999999999999999999997533 3344778999999999999999999999865554
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
......++||||++ |+|.++++. ..+++.++..++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 100 ~~~~~~~iv~e~~~-~~L~~~l~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~ 164 (364)
T 3qyz_A 100 EQMKDVYIVQDLME-TDLYKLLKT-----------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164 (364)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred cccceEEEEEcccC-cCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCC
Confidence 55567899999996 599998842 3589999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCcccc-ccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHH
Q 042075 863 MIAHVGDFGLATFLPLSHAQTS-SIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~ 940 (1033)
+.+||+|||+++.......... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+..
T Consensus 165 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~ 243 (364)
T 3qyz_A 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNH 243 (364)
T ss_dssp CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHH
T ss_pred CCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHH
Confidence 9999999999987654332211 123458999999998655 458999999999999999999999986432211 1111
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
......... .+..................................++.+++.+||+.||++|||++|+++.
T Consensus 244 i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 244 ILGILGSPS-QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHCSCC-HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCCCC-HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111111100 00000000000000000000000000000011234568999999999999999999999864
No 164
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=362.58 Aligned_cols=269 Identities=18% Similarity=0.232 Sum_probs=201.4
Q ss_pred hCCCCccceecccCceeEEEEEeCC---CCeEEEEEEeeccCch-----------hHHHHHHHHHHHHhcCCCCceeEee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDE---GKTIVAVKVFNLLHHG-----------AFKSFIAECNTLKNIRHRNLVKILT 775 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 775 (1033)
.++|++.+.||+|+||+||+|++.. ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 4679999999999999999999986 7888999998754321 1234667888999999999999999
Q ss_pred eeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCC
Q 042075 776 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPS 855 (1033)
Q Consensus 776 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~ 855 (1033)
++... +......++||||+ +++|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQ----------NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAA 180 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBG----------GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHH
Confidence 97542 23356889999999 9999999953 33789999999999999999999999 9999999999
Q ss_pred CeEecCCC--cEEEeecccceecCCCCcc-----ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 042075 856 NVLLDEEM--IAHVGDFGLATFLPLSHAQ-----TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 856 NIll~~~~--~~kL~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
||+++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999887 9999999999876432211 1112345899999999999999999999999999999999999999
Q ss_pred CccccCCccHHHHHhhh---CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCC
Q 042075 929 DIMFEGDMNLHNFAKTA---LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMD 1005 (1033)
Q Consensus 929 ~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 1005 (1033)
................. .+....... ....+++++.+++.+||+.||++|||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~dp~~Rps 315 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNLLDELPQSVLKWA-------------------------PSGSSCCEIAQFLVCAHSLAYDEKPN 315 (345)
T ss_dssp GGGTTCHHHHHHHHHHHHHTTTHHHHHHS-------------------------CTTSCCHHHHHHHHHHHTCCTTCCCC
T ss_pred cccccccHHHHHHHHhhcccccHHHHhhc-------------------------cccccHHHHHHHHHHHhhcCcccCCC
Confidence 53222111111111100 000000000 00023457999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042075 1006 MTNVVHQLQSIKN 1018 (1033)
Q Consensus 1006 ~~evl~~L~~i~~ 1018 (1033)
+++|++.|+++..
T Consensus 316 ~~~l~~~L~~~~~ 328 (345)
T 2v62_A 316 YQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHCTTCC
T ss_pred HHHHHHHHhccCC
Confidence 9999999987643
No 165
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.3e-39 Score=360.07 Aligned_cols=277 Identities=20% Similarity=0.332 Sum_probs=212.9
Q ss_pred CHHHHHHhhCCCCccceecccCceeEEEEEeC-----CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEee
Q 042075 702 SYQNLYNATDGFTSANLIGAGSFGSVYKGILD-----EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILT 775 (1033)
Q Consensus 702 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~ 775 (1033)
..++.....++|++.+.||+|+||.||+|++. .+++.||||+++... .....++.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33444556788999999999999999999876 357889999987543 234467889999999999999999999
Q ss_pred eeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCC
Q 042075 776 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPS 855 (1033)
Q Consensus 776 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~ 855 (1033)
++ ..++..++||||+++|+|.++++..............+++.++..++.||+.||+|||++ ||+||||||+
T Consensus 96 ~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 96 VV-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp EE-----CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred EE-----ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 95 445578999999999999999964211100011124578999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccC
Q 042075 856 NVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEG 934 (1033)
Q Consensus 856 NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~ 934 (1033)
||++++++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 246 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN- 246 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-
Confidence 99999999999999999986543332222223347889999999988899999999999999999999 8899853211
Q ss_pred CccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 042075 935 DMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQ 1014 (1033)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1014 (1033)
........... ... .+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 247 ----~~~~~~~~~~~--------~~~-------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 247 ----EQVLRFVMEGG--------LLD-------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp ----HHHHHHHHTTC--------CCC-------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred ----HHHHHHHHcCC--------cCC-------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111110000 000 00123456899999999999999999999999998
Q ss_pred HHHH
Q 042075 1015 SIKN 1018 (1033)
Q Consensus 1015 ~i~~ 1018 (1033)
++.+
T Consensus 296 ~~~~ 299 (322)
T 1p4o_A 296 EEME 299 (322)
T ss_dssp GGSC
T ss_pred Hhhc
Confidence 8744
No 166
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-38 Score=368.89 Aligned_cols=249 Identities=23% Similarity=0.313 Sum_probs=202.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.+++.++||||+++++++ ...+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----STPS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECC
Confidence 467999999999999999999999899999999997432 22346789999999999999999999995 4455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYIC----------KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp EEEEEEECCSSEEHHHHTT----------SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeE
Confidence 8999999999999999994 335689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||+++......... ...||+.|+|||++.+..+ +.++||||+||++|||++|+.||+... ........
T Consensus 157 L~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i 228 (476)
T 2y94_A 157 IADFGLSNMMSDGEFLR---TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKI 228 (476)
T ss_dssp ECCCSSCEECCTTCCBC---CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHH
T ss_pred EEeccchhhcccccccc---ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHH
Confidence 99999998765433222 2359999999999988765 689999999999999999999986321 11111111
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. +... .. +....+++.+++.+||+.||++|||++|+++.
T Consensus 229 ~--------~~~~-~~-------------------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 229 C--------DGIF-YT-------------------PQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp H--------TTCC-CC-------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred h--------cCCc-CC-------------------CccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0 0000 00 00123458899999999999999999999874
No 167
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=368.34 Aligned_cols=262 Identities=19% Similarity=0.212 Sum_probs=203.8
Q ss_pred HHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccc
Q 042075 704 QNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGV 780 (1033)
Q Consensus 704 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 780 (1033)
.+.....++|++.++||+|+||+||+|+++.+++.||||+++... ....+.+.+|..++.+++||||+++++++
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~--- 130 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF--- 130 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE---
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE---
Confidence 344455688999999999999999999999999999999997422 22335588999999999999999999994
Q ss_pred cccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 781 DYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 781 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
..++..|+||||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++
T Consensus 131 --~~~~~~~lVmE~~~gg~L~~~l~~---------~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld 196 (412)
T 2vd5_A 131 --QDENYLYLVMEYYVGGDLLTLLSK---------FGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLD 196 (412)
T ss_dssp --ECSSEEEEEECCCCSCBHHHHHHH---------HSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred --eeCCEEEEEEcCCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeec
Confidence 455689999999999999999953 234689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccC-------CCCCCcccchHHHHHHHHHHHhCCCCCCcccc
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL-------GSEVSINGDVYSYGILLLELVTRKKPTDIMFE 933 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~ 933 (1033)
.++++||+|||+++......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 197 ~~g~vkL~DFGla~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~ 275 (412)
T 2vd5_A 197 RCGHIRLADFGSCLKLRADGTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275 (412)
T ss_dssp TTSCEEECCCTTCEECCTTSCEE-CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred CCCCEEEeechhheeccCCCccc-cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH
Confidence 99999999999998765443221 22345999999999987 46789999999999999999999999863211
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCC---CCHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDR---MDMTNVV 1010 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~evl 1010 (1033)
. ..+........ ...-+. .....++++.+++.+||. +|++| |+++|++
T Consensus 276 ~-~~~~~i~~~~~-----~~~~p~----------------------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~ 326 (412)
T 2vd5_A 276 A-ETYGKIVHYKE-----HLSLPL----------------------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFR 326 (412)
T ss_dssp H-HHHHHHHTHHH-----HCCCC--------------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHH
T ss_pred H-HHHHHHHhccc-----CcCCCc----------------------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence 0 01111110000 000000 001234568999999999 99998 5888886
Q ss_pred HH
Q 042075 1011 HQ 1012 (1033)
Q Consensus 1011 ~~ 1012 (1033)
+.
T Consensus 327 ~H 328 (412)
T 2vd5_A 327 TH 328 (412)
T ss_dssp TS
T ss_pred cC
Confidence 54
No 168
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.8e-38 Score=368.25 Aligned_cols=167 Identities=23% Similarity=0.361 Sum_probs=100.2
Q ss_pred eEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcc
Q 042075 85 RVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLS 164 (1033)
Q Consensus 85 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 164 (1033)
+++.|++.+++++. ++ .+..+++|++|+|++|.+++..| +.++++|++|+|++|.+++..| ++++++|++|+|+
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 45566666666653 33 35666677777777776664333 6666777777777777664433 6667777777777
Q ss_pred cccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCC
Q 042075 165 SNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTI 244 (1033)
Q Consensus 165 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 244 (1033)
+|.+++. |. +.++++|++|++++|++++. + .++++++|++|+++ |.+.+.. .++.+++|++|++++|++++.
T Consensus 121 ~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~- 192 (466)
T 1o6v_A 121 NNQITDI-DP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI- 192 (466)
T ss_dssp SSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-
T ss_pred CCCCCCC-hH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-
Confidence 7766643 22 66667777777777766642 3 36666677777765 4444322 266666777777777766632
Q ss_pred cccccCCCceeEEeccCccccC
Q 042075 245 PSSIFNISSITVFDAGINQIQG 266 (1033)
Q Consensus 245 p~~l~~l~~L~~L~ls~N~l~~ 266 (1033)
..+..+++|+.|++++|.+++
T Consensus 193 -~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 193 -SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp -GGGGGCTTCSEEECCSSCCCC
T ss_pred -hhhccCCCCCEEEecCCcccc
Confidence 234555555555555555543
No 169
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=353.65 Aligned_cols=245 Identities=24% Similarity=0.269 Sum_probs=192.1
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCc
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
++|++.++||+|+||+||+|++..+++.||||++.... .....+...|+..+.++ +||||++++++|. .++.
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCCE
Confidence 57999999999999999999999899999999986432 23334555666666665 9999999999953 4558
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+ +++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEA---------WGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEEECC-CCBHHHHHHH---------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEE
T ss_pred EEEEEecc-CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEE
Confidence 99999999 7799998853 345699999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+++........ ....||+.|+|||++.+ .++.++|||||||++|||++|..|+... ...........+
T Consensus 199 ~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~~ 270 (311)
T 3p1a_A 199 GDFGLLVELGTAGAG---EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYLP 270 (311)
T ss_dssp CCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCCC
T ss_pred ccceeeeecccCCCC---cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCCC
Confidence 999999876543322 22348999999999876 7899999999999999999997765321 111111110000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
. ......++++.+++.+||+.||++|||++|+++
T Consensus 271 ~------------------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 P------------------------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp H------------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c------------------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0 001123466899999999999999999999986
No 170
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.2e-38 Score=348.42 Aligned_cols=255 Identities=27% Similarity=0.358 Sum_probs=199.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.+.||+|+||.||+|++. ++.||||+++... ..+++.+|++++++++||||+++++++. ...+..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCceE
Confidence 468999999999999999999985 7899999987543 4577899999999999999999999863 3345789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||+++++|.+++.. .....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHH--------HHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHh--------cccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEee
Confidence 99999999999999953 2223488999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCc
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
||++........ ...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...........
T Consensus 161 fg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~- 232 (278)
T 1byg_A 161 FGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYK- 232 (278)
T ss_dssp CCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCC-
T ss_pred cccccccccccc-----CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCC-
Confidence 999986543221 1237889999999988899999999999999999998 99998632111 11111100000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
...+..+++++.+++.+||+.||++|||+.|+++.|++++...
T Consensus 233 -----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 233 -----------------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp -----------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----------------------------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 0001123456899999999999999999999999999997653
No 171
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-38 Score=346.85 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=179.5
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ...+
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKD 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCC
Confidence 468999999999999999999999899999999987432 23356788999999999999999999995 3455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+ ++++.+++. ....+++.++..++.|++.||+|||++ ||+||||||+||++++++.+|
T Consensus 87 ~~~lv~e~~-~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 152 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIV----------QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp CEEEEEECC-CEEHHHHHH----------TSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEE
T ss_pred eEEEEehhc-CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEE
Confidence 889999999 778888874 234589999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||.+.......... ...||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... ........
T Consensus 153 l~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~ 224 (275)
T 2eue_A 153 IADFGLSNIMTDGNFLK---TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNI 224 (275)
T ss_dssp ECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH
T ss_pred EeecccceeccCccccc---CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHH
Confidence 99999998664433222 2348999999999988765 789999999999999999999986321 11111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. .... ..+...++++.+++.+||+.||++|||++|+++.
T Consensus 225 ~--------~~~~--------------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 225 S--------NGVY--------------------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp H--------HTCC--------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred H--------hCCC--------------------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 0000 0001123558899999999999999999999764
No 172
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=358.95 Aligned_cols=243 Identities=23% Similarity=0.328 Sum_probs=200.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--------hhHHHHHHHHHHHHhcCCCCceeEeeeecccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--------GAFKSFIAECNTLKNIRHRNLVKILTACSGVD 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 781 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~---- 98 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF---- 98 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE----
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE----
Confidence 4689999999999999999999999999999999975421 1334677899999999999999999995
Q ss_pred ccCCCceeEEEEcccCC-chhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 782 YQGNDFKALVFEFMHNR-SLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
...+..++||||+.+| +|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++
T Consensus 99 -~~~~~~~lv~e~~~~g~~l~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 99 -ENQGFFQLVMEKHGSGLDLFAFID----------RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIA 164 (335)
T ss_dssp -ECSSEEEEEEECCTTSCBHHHHHH----------TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred -eeCCEEEEEEEeCCCCccHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEc
Confidence 4556889999999777 9999994 334689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHH
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~ 939 (1033)
+++.+||+|||+++......... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------ 235 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKLFY---TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------ 235 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCCBC---EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------
T ss_pred CCCcEEEeecccceECCCCCcee---ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------
Confidence 99999999999998775543322 2348999999999988876 7899999999999999999999853111
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
........ +...++++.+++.+||+.||++|||++|+++.
T Consensus 236 -------------~~~~~~~~--------------------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 -------------TVEAAIHP--------------------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -------------GTTTCCCC--------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -------------HHhhccCC--------------------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 00123458999999999999999999999885
No 173
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=361.43 Aligned_cols=282 Identities=19% Similarity=0.192 Sum_probs=197.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeecccc-ccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 785 (1033)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|++++++++||||+++++++.... ....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 457899999999999999999999989999999998543 2334567889999999999999999999975432 1122
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...|+||||+ +++|.++++. ..+++..+..++.||++||+|||++ ||+||||||+||+++.++.+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 167 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH-----------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCEL 167 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred ceEEEEEecC-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCE
Confidence 4569999999 8899999842 4588999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||+++...... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+......
T Consensus 168 kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~ 241 (367)
T 1cm8_A 168 KILDFGLARQADSEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKV 241 (367)
T ss_dssp EECCCTTCEECCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred EEEeeeccccccccc-----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh
Confidence 999999998754321 22358999999999877 679999999999999999999999986322110 11111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ....+.+......................-........+.+.+++.+||+.||++|||++|+++.
T Consensus 242 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 242 TG-TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HC-CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cC-CCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00 00000000000000000000000000000000011234668999999999999999999999874
No 174
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-38 Score=359.60 Aligned_cols=271 Identities=20% Similarity=0.262 Sum_probs=203.3
Q ss_pred HHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc-----CchhHHHHHHHHHHHHhcCCCCceeEeeeecc
Q 042075 705 NLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL-----HHGAFKSFIAECNTLKNIRHRNLVKILTACSG 779 (1033)
Q Consensus 705 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 779 (1033)
++....++|++.+.||+|+||+||+|++..+++.||+|+++.. .....+.+.+|++++++++||||+++++++
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-- 97 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY-- 97 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh--
Confidence 3455677899999999999999999999999999999998643 234557899999999999999999999995
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCcc------------------------------ccccccccCHHHHHHHH
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDE------------------------------TEEAPRSLNLLQRLDIG 829 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------~~~~~~~l~~~~~~~i~ 829 (1033)
...+..++||||+++|+|.+++........ .......+++..+..++
T Consensus 98 ---~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 98 ---EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp ---ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred ---ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 445689999999999999999953111100 00113345678889999
Q ss_pred HHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC--cEEEeecccceecCCCCc--cccccccccccccccccccCC--C
Q 042075 830 IDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM--IAHVGDFGLATFLPLSHA--QTSSIFAKGSIGYIAPEYGLG--S 903 (1033)
Q Consensus 830 ~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~--~~kL~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~ 903 (1033)
.||+.||+|||++ +|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+ .
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 251 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence 9999999999999 999999999999998776 899999999987533221 111223458999999999875 6
Q ss_pred CCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHH
Q 042075 904 EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIE 983 (1033)
Q Consensus 904 ~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1033)
.++.++|||||||++|||++|+.||......+ ........... ... .....
T Consensus 252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~------------~~~----------------~~~~~ 302 (345)
T 3hko_A 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLC------------FEN----------------PNYNV 302 (345)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCC------------TTS----------------GGGGG
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcccc------------cCC----------------ccccc
Confidence 78999999999999999999999986322111 11111110000 000 00011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 984 CLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 984 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.++++.+++.+||+.||++|||+.|+++.
T Consensus 303 ~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 303 LSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 24568999999999999999999999874
No 175
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.7e-38 Score=353.11 Aligned_cols=278 Identities=22% Similarity=0.321 Sum_probs=211.0
Q ss_pred CHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHh--cCCCCceeEeeeecc
Q 042075 702 SYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKN--IRHRNLVKILTACSG 779 (1033)
Q Consensus 702 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 779 (1033)
+...-....++|++.+.||+|+||.||+|++. ++.||||+++.. ..+.+.+|+++++. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 34334455678999999999999999999984 899999998643 34667889999888 699999999999643
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCcEecc
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLH--------HDCQPPIVHCD 851 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivHrD 851 (1033)
.. ......++||||+++|+|.++++. ..+++.++..++.|++.||+||| +. +|+|||
T Consensus 108 ~~-~~~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~D 172 (342)
T 1b6c_B 108 DN-GTWTQLWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRD 172 (342)
T ss_dssp CC-SSCCCEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSC
T ss_pred cC-CccceeEEEEeecCCCcHHHHHhc-----------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCC
Confidence 22 111378999999999999999942 35899999999999999999999 77 999999
Q ss_pred CCCCCeEecCCCcEEEeecccceecCCCCccc--cccccccccccccccccCCC------CCCcccchHHHHHHHHHHHh
Q 042075 852 LKPSNVLLDEEMIAHVGDFGLATFLPLSHAQT--SSIFAKGSIGYIAPEYGLGS------EVSINGDVYSYGILLLELVT 923 (1033)
Q Consensus 852 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~vl~ellt 923 (1033)
|||+||++++++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 173 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t 252 (342)
T 1b6c_B 173 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252 (342)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh
Confidence 99999999999999999999998765433211 12234589999999998765 34478999999999999999
Q ss_pred C----------CCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHh
Q 042075 924 R----------KKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGV 993 (1033)
Q Consensus 924 g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 993 (1033)
| +.||......+.....+.......... +... .+ ....++++.+.+++.
T Consensus 253 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----------------~~-~~~~~~~~~l~~li~ 311 (342)
T 1b6c_B 253 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR----PNIP----------------NR-WQSCEALRVMAKIMR 311 (342)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC----CCCC----------------GG-GGTSHHHHHHHHHHH
T ss_pred ccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhC----CCCc----------------cc-ccchhHHHHHHHHHH
Confidence 9 667654333332333222211111100 0000 00 012246678999999
Q ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 994 ACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 994 ~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
+||+.||++|||+.||++.|+++.+..
T Consensus 312 ~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 312 ECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp HHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999997654
No 176
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.7e-39 Score=350.34 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=206.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY------- 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------- 782 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|+++... +.+.+|++++++++||||+++++++....+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 457899999999999999999999899999999987543 346789999999999999999998754222
Q ss_pred ----cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeE
Q 042075 783 ----QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVL 858 (1033)
Q Consensus 783 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (1033)
......++||||+++++|.+++.. .....+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil 154 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEK--------RRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIF 154 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHH--------GGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhh--------ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEE
Confidence 124457999999999999999953 2335689999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccH
Q 042075 859 LDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNL 938 (1033)
Q Consensus 859 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~ 938 (1033)
+++++.+||+|||++.......... ...||+.|+|||++.+..++.++||||||+++|||++|..|+...
T Consensus 155 ~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------- 224 (284)
T 2a19_B 155 LVDTKQVKIGDFGLVTSLKNDGKRT---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------- 224 (284)
T ss_dssp EEETTEEEECCCTTCEESSCCSCCC---CCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------
T ss_pred EcCCCCEEECcchhheecccccccc---ccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------
Confidence 9999999999999998765443222 234899999999999999999999999999999999999886311
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKN 1018 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 1018 (1033)
...... ..+.... ...+..+.+++.+||+.||++|||+.|+++.|+.+++
T Consensus 225 ~~~~~~--------~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 225 SKFFTD--------LRDGIIS----------------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HHHHHH--------HHTTCCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred HHHHHH--------hhccccc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 001000 0000000 0113457899999999999999999999999999876
Q ss_pred Hhh
Q 042075 1019 ILL 1021 (1033)
Q Consensus 1019 ~~~ 1021 (1033)
...
T Consensus 275 ~~~ 277 (284)
T 2a19_B 275 SPE 277 (284)
T ss_dssp ---
T ss_pred CCC
Confidence 554
No 177
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.9e-38 Score=346.63 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=199.8
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
+.|++.+.||+|+||.||+|.+..++..||+|+++.. .....+.+.+|+.++++++||||+++++++... .......
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 3478888999999999999999999999999998743 334457789999999999999999999987543 2345578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--cEeccCCCCCeEec-CCCcE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP--IVHCDLKPSNVLLD-EEMIA 865 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~-~~~~~ 865 (1033)
++||||+++++|.+++. ....+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+
T Consensus 105 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~ 171 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLK----------RFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSV 171 (290)
T ss_dssp EEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCE
T ss_pred EEEEEecCCCCHHHHHH----------HccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCE
Confidence 99999999999999994 235689999999999999999999998 7 99999999999998 78999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||++........ ....||+.|+|||++.+ .++.++||||+||++|||++|+.||..... ........
T Consensus 172 kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~ 242 (290)
T 1t4h_A 172 KIGDLGLATLKRASFA----KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRV 242 (290)
T ss_dssp EECCTTGGGGCCTTSB----EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHH
T ss_pred EEeeCCCccccccccc----ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc----HHHHHHHH
Confidence 9999999975443322 12348999999998764 589999999999999999999999863221 11111111
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
........ .+...++++.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 243 TSGVKPAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TTTCCCGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCCccc--------------------------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 10000000 000113458999999999999999999999863
No 178
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.6e-39 Score=357.31 Aligned_cols=249 Identities=20% Similarity=0.233 Sum_probs=178.8
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCCCceeEEEEc
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKALVFEF 794 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~ 794 (1033)
.+.||+|+||+||+|++..+++.||||++... ....+.+|+.+++++. ||||+++++++ ..+...++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVF-----HDQLHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcCCEEEEEEEc
Confidence 47899999999999999999999999998743 3466789999999996 99999999995 455688999999
Q ss_pred ccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC---cEEEeecc
Q 042075 795 MHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM---IAHVGDFG 871 (1033)
Q Consensus 795 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~---~~kL~DfG 871 (1033)
+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIK----------KKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHH----------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 99999999995 335689999999999999999999999 999999999999998665 89999999
Q ss_pred cceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCC--ccHHHHHhhhCCcc
Q 042075 872 LATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGD--MNLHNFAKTALPDH 949 (1033)
Q Consensus 872 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~ 949 (1033)
+++......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .............
T Consensus 155 ~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~- 231 (325)
T 3kn6_A 155 FARLKPPDNQPL--KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG- 231 (325)
T ss_dssp TCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT-
T ss_pred cceecCCCCCcc--cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC-
Confidence 998765433222 22348999999999999999999999999999999999999996432210 0111111111000
Q ss_pred hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 950 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 950 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
..... .......++++.+++.+||+.||++|||++|+++
T Consensus 232 -------~~~~~----------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 232 -------DFSFE----------------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -------CCCCC----------------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred -------CCCCC----------------cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00000 0011123567899999999999999999999874
No 179
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2e-38 Score=364.36 Aligned_cols=255 Identities=18% Similarity=0.226 Sum_probs=193.4
Q ss_pred hCCCCcc-ceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSA-NLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|.+. ++||+|+||+||+|.+..+++.||||+++.. ..+.+|++++.+. +||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 4567776 6899999999999999999999999998632 4567888887554 899999999986432 233557
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC---CCc
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE---EMI 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 864 (1033)
.|+||||+++|+|.+++.. .....+++.++..++.||+.||+|||++ +|+||||||+||+++. ++.
T Consensus 134 ~~lv~E~~~gg~L~~~l~~--------~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~ 202 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQD--------RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 202 (400)
T ss_dssp EEEEEECCCSEEHHHHHHC--------C---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCC
T ss_pred EEEEEEeCCCCcHHHHHHH--------hCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCcc
Confidence 8999999999999999953 2234689999999999999999999999 9999999999999997 789
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCc--cHHHHH
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM--NLHNFA 942 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~--~~~~~~ 942 (1033)
+||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......
T Consensus 203 ~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i 279 (400)
T 1nxk_A 203 LKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279 (400)
T ss_dssp EEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH
T ss_pred EEEEecccccccCCCCcc---ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH
Confidence 999999999876433222 224489999999999999999999999999999999999999964322111 011110
Q ss_pred h-hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 943 K-TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 943 ~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. ...... .+ ....+++++.+++.+||+.||++|||+.|+++.
T Consensus 280 ~~~~~~~~-----~~-----------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 280 RMGQYEFP-----NP-----------------------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHTCCCCC-----TT-----------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HcCcccCC-----Cc-----------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000000 00 001234568999999999999999999999975
No 180
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-38 Score=345.21 Aligned_cols=269 Identities=23% Similarity=0.342 Sum_probs=213.0
Q ss_pred hCCCCccc-eecccCceeEEEEEeC--CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSAN-LIGAGSFGSVYKGILD--EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|.+.+ .||+|+||.||+|.+. .+++.||||+++... ....+++.+|++++++++||||+++++++. .
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 81 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------A 81 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------S
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------C
Confidence 34666666 9999999999999864 467889999997643 345578899999999999999999999962 2
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~ 149 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYA 149 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEE
T ss_pred CCcEEEEEeCCCCCHHHHHHh---------CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCE
Confidence 358999999999999999953 345689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHh
Q 042075 866 HVGDFGLATFLPLSHAQT-SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 943 (1033)
||+|||+++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ........
T Consensus 150 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~ 227 (287)
T 1u59_A 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIE 227 (287)
T ss_dssp EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHH
T ss_pred EECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHh
Confidence 999999998775433221 1222346899999999988889999999999999999998 9999863221 11111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQ 1023 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 1023 (1033)
.... ...+..+++++.+++.+||+.||++||++.|+++.|+++......+
T Consensus 228 ~~~~------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 228 QGKR------------------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp TTCC------------------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCc------------------------------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 1000 0001123456899999999999999999999999999999887766
Q ss_pred hhhcc
Q 042075 1024 RIVSN 1028 (1033)
Q Consensus 1024 ~~~~~ 1028 (1033)
.-...
T Consensus 278 ~~~~~ 282 (287)
T 1u59_A 278 VEGHH 282 (287)
T ss_dssp CSSCC
T ss_pred ccCCc
Confidence 54443
No 181
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=347.53 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=182.7
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ...
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDS 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECS
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccC
Confidence 3467999999999999999999998899999999987432 22346789999999999999999999995 445
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++++|.+++.. ....+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~ 151 (278)
T 3cok_A 84 NYVYLVLEMCHNGEMNRYLKN---------RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNI 151 (278)
T ss_dssp SEEEEEEECCTTEEHHHHHHT---------CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCE
T ss_pred CeEEEEEecCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCE
Confidence 688999999999999999953 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||.+.......... ....||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ...
T Consensus 152 kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~-- 222 (278)
T 3cok_A 152 KIADFGLATQLKMPHEKH--YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLN-- 222 (278)
T ss_dssp EECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------
T ss_pred EEEeecceeeccCCCCcc--eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHH--
Confidence 999999998765332221 22348999999999999899999999999999999999999986321110 000
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
..... ... .+...+.++.+++.+||+.||++|||++|+++
T Consensus 223 ------~~~~~----~~~----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 223 ------KVVLA----DYE----------------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -------CCSS----CCC----------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------HHhhc----ccC----------------CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00000 000 00012345889999999999999999999986
No 182
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=374.80 Aligned_cols=231 Identities=22% Similarity=0.150 Sum_probs=166.1
Q ss_pred EEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccc
Q 042075 383 VLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNF 461 (1033)
Q Consensus 383 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~ 461 (1033)
.|++++|.+++..+..|.++++|++|++++|++++..+..|..+++|+.|+|++|++.+..+..|..+. |++|++++|.
T Consensus 132 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 132 SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 333333444444556677888899999999999977777899999999999999988866555555554 5555555555
Q ss_pred cCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCc
Q 042075 462 LQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPR 541 (1033)
Q Consensus 462 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 541 (1033)
+.+.+|..+....+|++ |++++|++++..+..|..+++|+.|+|++|++++..+.
T Consensus 212 ~~~~~~~~~~~~~~L~~-------------------------L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 266 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTS-------------------------LSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 266 (477)
T ss_dssp TCCEECTTTTTTCCCSE-------------------------EEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTT
T ss_pred cccccCcccccCccccE-------------------------EECcCCcccccCHHHhcCccccCeeECCCCcCCccChh
Confidence 54444444444444444 45555555433234566778888888888888877777
Q ss_pred ccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCcccccccc
Q 042075 542 TLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVFRNAS 621 (1033)
Q Consensus 542 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~ 621 (1033)
.|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+..+.+++..
T Consensus 267 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~ 346 (477)
T 2id5_A 267 MLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRW 346 (477)
T ss_dssp SCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTT
T ss_pred hccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhh
Confidence 88888888888888888888888888888888888888888887777778888888888888888888776554444444
Q ss_pred cccccccccccCCcccc
Q 042075 622 ITSVLGNLKLCGGTHEF 638 (1033)
Q Consensus 622 ~~~~~~n~~lcg~~~~~ 638 (1033)
...+.++...|+.|...
T Consensus 347 ~~~~~~~~~~C~~p~~~ 363 (477)
T 2id5_A 347 RLNFNRQQPTCATPEFV 363 (477)
T ss_dssp SSCCTTCCCBEEESGGG
T ss_pred ccccCccCceeCCchHH
Confidence 45566777778776554
No 183
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.5e-38 Score=346.14 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=199.7
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
+.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++ ...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDA 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecC
Confidence 3568999999999999999999999999999999986432 22346788999999999999999999995 445
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++++|.+++. ....+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQ----------KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCE
T ss_pred CEEEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCE
Confidence 57899999999999999984 235689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||++........ ....||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ........
T Consensus 149 ~l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~ 219 (279)
T 3fdn_A 149 KIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETYKRI 219 (279)
T ss_dssp EECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHH
T ss_pred EEEeccccccCCcccc----cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-----HHHHHHHH
Confidence 9999999865433221 22348999999999999999999999999999999999999986321 11111000
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. . .... .+...++.+.+++.+||+.||++|||++|+++.
T Consensus 220 ~-----~-~~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 220 S-----R-VEFT----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp H-----H-TCCC----------------------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred H-----h-CCCC----------------------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0 0000 001123558899999999999999999999986
No 184
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.8e-38 Score=349.42 Aligned_cols=265 Identities=23% Similarity=0.321 Sum_probs=208.1
Q ss_pred HhhCCCCccc-eecccCceeEEEEEe--CCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 708 NATDGFTSAN-LIGAGSFGSVYKGIL--DEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 708 ~~~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
...++|++.+ .||+|+||+||+|.+ ..+++.||||+++... ....+++.+|++++++++||||+++++++
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----- 87 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC----- 87 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----
Confidence 3456788888 999999999999954 5567899999997542 23357899999999999999999999986
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
..+..++||||+++++|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 88 -~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~ 153 (291)
T 1xbb_A 88 -EAESWMLVMEMAELGPLNKYLQQ----------NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQ 153 (291)
T ss_dssp -ESSSEEEEEECCTTEEHHHHHHH----------CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred -CCCCcEEEEEeCCCCCHHHHHHh----------CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCC
Confidence 23468999999999999999952 34589999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCccc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHH
Q 042075 863 MIAHVGDFGLATFLPLSHAQT-SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~ 940 (1033)
+.+||+|||++.......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~ 231 (291)
T 1xbb_A 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTA 231 (291)
T ss_dssp TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHH
T ss_pred CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHH
Confidence 999999999998765443321 1222336789999999988889999999999999999999 9999863211 11111
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHh
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNIL 1020 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 1020 (1033)
........ ..+..+++++.+++.+||+.||++||++.|+++.|+++-...
T Consensus 232 ~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 232 MLEKGERM------------------------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCC------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11100000 001123456899999999999999999999999999998766
Q ss_pred hhc
Q 042075 1021 LGQ 1023 (1033)
Q Consensus 1021 ~~~ 1023 (1033)
.+.
T Consensus 282 ~~~ 284 (291)
T 1xbb_A 282 VNE 284 (291)
T ss_dssp HHH
T ss_pred hhc
Confidence 543
No 185
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4e-39 Score=376.61 Aligned_cols=261 Identities=28% Similarity=0.428 Sum_probs=203.5
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|.+.. +..||||+++.... ..+++.+|++++++++||||+++++++.+ +..
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~ 253 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 253 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cce
Confidence 34578899999999999999999984 56799999975432 34789999999999999999999998632 468
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++|+|.++++. .....+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||+
T Consensus 254 ~iv~e~~~~gsL~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 322 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKG--------ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 322 (452)
T ss_dssp EEEECCCTTCBHHHHHSH--------HHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEehhhcCCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEEC
Confidence 999999999999999953 2234589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .........
T Consensus 323 DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~-- 397 (452)
T 1fmk_A 323 DFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERG-- 397 (452)
T ss_dssp CCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT--
T ss_pred CCccceecCCCcee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC--
Confidence 99999876433221 1222347889999999988899999999999999999999 99998632111 011000000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
.+.+.+..+++.+.+++.+||+.||++|||++++++.|+++.....
T Consensus 398 ----------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 398 ----------------------------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp ----------------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred ----------------------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 0001112345678999999999999999999999999998865443
No 186
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=359.24 Aligned_cols=252 Identities=21% Similarity=0.351 Sum_probs=192.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCC--CCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRH--RNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|.+. +++.||||+++.. .....+.+.+|+.++++++| |||+++++++ ..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITD 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----eeC
Confidence 467999999999999999999986 6889999998743 23345778999999999976 9999999995 445
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||| +.+++|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~ 146 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLK----------KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 146 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHH----------HSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred CEEEEEEe-CCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcE
Confidence 58999999 55889999995 345689999999999999999999999 999999999999997 5789
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCC-----------CCCCcccchHHHHHHHHHHHhCCCCCCccccC
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-----------SEVSINGDVYSYGILLLELVTRKKPTDIMFEG 934 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~ 934 (1033)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 147 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp EECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 9999999987654433322333459999999999754 67899999999999999999999998632211
Q ss_pred CccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 935 DMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... ..++....... +...+.++.+++.+||+.||++|||+.|+++.
T Consensus 227 ---~~~~~---------~~~~~~~~~~~------------------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ---ISKLH---------AIIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---HHHHH---------HHHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHHH---------HHhcCCcccCC------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111 11111000000 00112458899999999999999999999875
No 187
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.7e-38 Score=354.92 Aligned_cols=278 Identities=21% Similarity=0.255 Sum_probs=204.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++... .+.+.+|++++++++ ||||+++++++.. ......
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKD---PVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCce
Confidence 367999999999999999999999899999999987433 467889999999996 9999999999643 224578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC-cEEE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM-IAHV 867 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kL 867 (1033)
++||||+++++|.++++ .+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||
T Consensus 109 ~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl 172 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRL 172 (330)
T ss_dssp EEEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EEEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999883 278889999999999999999999 999999999999999776 8999
Q ss_pred eecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||+++......... ...||..|+|||++.+ ..++.++||||+||++|||++|+.||.................-
T Consensus 173 ~Dfg~a~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~ 249 (330)
T 3nsz_A 173 IDWGLAEFYHPGQEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 249 (330)
T ss_dssp CCCTTCEECCTTCCCC---SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred EeCCCceEcCCCCccc---cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC
Confidence 9999998765443322 2348999999999877 67899999999999999999999998533222222222111111
Q ss_pred CcchhhhcccccCCCchh---hhhccc--hhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDED---LAVHGN--QRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.....+.++......... ...... ..............++++.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 250 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111111111110000000 000000 000000111112245678999999999999999999999863
No 188
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.7e-38 Score=350.69 Aligned_cols=270 Identities=23% Similarity=0.259 Sum_probs=198.1
Q ss_pred hCCCCcc-ceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSA-NLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.+.|++. +.||+|+||+||+|++..+++.||||+++.......+.+.+|++++.++ +||||+++++++ ..++.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEEDR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeCCE
Confidence 3578874 7899999999999999989999999999866555567899999999995 799999999995 34558
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc---
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI--- 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--- 864 (1033)
.++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~ 152 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHK----------RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSP 152 (316)
T ss_dssp EEEEEECCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCS
T ss_pred EEEEEEcCCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCc
Confidence 9999999999999999952 34689999999999999999999999 9999999999999998775
Q ss_pred EEEeecccceecCCCCc-----cccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCccccC
Q 042075 865 AHVGDFGLATFLPLSHA-----QTSSIFAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPTDIMFEG 934 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~ 934 (1033)
+||+|||++........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp EEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred eEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 99999999976542211 111122348999999999865 56899999999999999999999999754322
Q ss_pred CccHHHHHhh-hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 935 DMNLHNFAKT-ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 935 ~~~~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
+..+...... .......+.+.......+ .......++++.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 233 DCGWDRGEACPACQNMLFESIQEGKYEFP---------------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CSCC----CCHHHHHHHHHHHHHCCCCCC---------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccccccchhHHHHHHHHHhccCcccC---------------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 2111000000 000000000000000000 00001234668999999999999999999999874
No 189
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-38 Score=352.30 Aligned_cols=263 Identities=23% Similarity=0.391 Sum_probs=201.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCC----CeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEG----KTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
.++|++.+.||+|+||.||+|.+..+ +..||||+++... ......+.+|+.++++++||||+++++++ ..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 117 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SK 117 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ec
Confidence 34677889999999999999998644 3469999997543 33456789999999999999999999995 44
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
.+..++||||+++|+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+||++++++.
T Consensus 118 ~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 185 (333)
T 1mqb_A 118 YKPMMIITEYMENGALDKFLRE---------KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLV 185 (333)
T ss_dssp SSSEEEEEECCTTEEHHHHHHH---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred CCCcEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCc
Confidence 5688999999999999999953 335689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 042075 865 AHVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 942 (1033)
+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ......
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~ 263 (333)
T 1mqb_A 186 CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAI 263 (333)
T ss_dssp EEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHH
T ss_pred EEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHH
Confidence 999999999876443221 11122336789999999998999999999999999999999 99998532110 011100
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
.... +...+..++.++.+++.+||+.||++||++.|+++.|+++.+...
T Consensus 264 ~~~~------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 264 NDGF------------------------------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HTTC------------------------------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HCCC------------------------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0000 000011234568999999999999999999999999999877554
No 190
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.9e-38 Score=374.37 Aligned_cols=255 Identities=20% Similarity=0.297 Sum_probs=204.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.++||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++ ...+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeCC
Confidence 457899999999999999999999999999999997432 23346688999999999999999999984 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||++||+|.+++.. .....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~--------~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vK 326 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYH--------MGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHS--------SSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEcCCCCcHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeE
Confidence 89999999999999999954 2234589999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+|+......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 327 L~DFGla~~~~~~~~~~---~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~ 402 (576)
T 2acx_A 327 ISDLGLAVHVPEGQTIK---GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVK 402 (576)
T ss_dssp ECCCTTCEECCTTCCEE---CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHH
T ss_pred EEecccceecccCcccc---ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhh
Confidence 99999998765443222 2359999999999999999999999999999999999999996432211 1111111000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-----DMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1012 (1033)
..... .+...++++.+++.+||+.||++|| +++||++.
T Consensus 403 ---------~~~~~-------------------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 403 ---------EVPEE-------------------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---------HCCCC-------------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---------ccccc-------------------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 00000 0011235689999999999999999 77888764
No 191
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5e-38 Score=381.26 Aligned_cols=385 Identities=20% Similarity=0.226 Sum_probs=248.3
Q ss_pred CCCCCCCCCCCCCCCcc----eeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCcccccc
Q 042075 56 DPLGVFGSWNESIHFCQ----WHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRL 131 (1033)
Q Consensus 56 ~~~~~~~~W~~~~~~c~----w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 131 (1033)
+....+++|..+.+||. |.++.|+.. + +-..... .....-..+++++.|++++|.+.+..+..|..+
T Consensus 4 ~~~~~l~~~~~~~~C~~~~~~~~c~~~~~~----i---~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l 74 (597)
T 3oja_B 4 QQRYNVKPRQPEYKCIDSNLQYDCVFYDVH----I---DMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSF 74 (597)
T ss_dssp -------CCCSEECCCCC--CCSEEECSCE----E---CSSCCCC--EESCSSGGGCCCSEEEESSCEESEECTHHHHHC
T ss_pred cccccccCCCCCCcCcccCcCceeEecCce----e---ccccccc--ccCcccccCCCceEEEeeCCCCCCcCHHHHccC
Confidence 34456789998878874 777766521 1 1111111 111122346778888888888876555567778
Q ss_pred ccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEc
Q 042075 132 RRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFL 211 (1033)
Q Consensus 132 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 211 (1033)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 88888888888888777778888888888888888888777777777888888888888877555555677777777777
Q ss_pred ccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCC
Q 042075 212 SRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTG 291 (1033)
Q Consensus 212 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 291 (1033)
++|.+++..|..|+.+++|++|+|++|++++..
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------------------------------------- 187 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD----------------------------------------------- 187 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC-----------------------------------------------
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC-----------------------------------------------
Confidence 777777666666666666666666666555210
Q ss_pred CCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCc
Q 042075 292 AIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLP 371 (1033)
Q Consensus 292 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip 371 (1033)
+..+++|+.|++++|.++
T Consensus 188 -----~~~l~~L~~L~l~~n~l~--------------------------------------------------------- 205 (597)
T 3oja_B 188 -----LSLIPSLFHANVSYNLLS--------------------------------------------------------- 205 (597)
T ss_dssp -----GGGCTTCSEEECCSSCCS---------------------------------------------------------
T ss_pred -----hhhhhhhhhhhcccCccc---------------------------------------------------------
Confidence 111122222222222222
Q ss_pred cccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce
Q 042075 372 ACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK 451 (1033)
Q Consensus 372 ~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 451 (1033)
+ +...++|+.|++++|.++...+. + .++|+.|+|++|.++
T Consensus 206 ---------------------~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~----------- 245 (597)
T 3oja_B 206 ---------------------T-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLT----------- 245 (597)
T ss_dssp ---------------------E-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCC-----------
T ss_pred ---------------------c-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCC-----------
Confidence 1 01112344444444444322111 1 123444444444433
Q ss_pred eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcc
Q 042075 452 LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVF 531 (1033)
Q Consensus 452 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 531 (1033)
+ +..+..+++|++|+|++|+++ +..|..|+.+++|+.|+|+
T Consensus 246 ------------~--~~~l~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~Ls 286 (597)
T 3oja_B 246 ------------D--TAWLLNYPGLVEVDLSYNELE-------------------------KIMYHPFVKMQRLERLYIS 286 (597)
T ss_dssp ------------C--CGGGGGCTTCSEEECCSSCCC-------------------------EEESGGGTTCSSCCEEECT
T ss_pred ------------C--ChhhccCCCCCEEECCCCccC-------------------------CCCHHHhcCccCCCEEECC
Confidence 2 133445556666666666554 4556677788889999999
Q ss_pred ccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccC
Q 042075 532 ENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMV 611 (1033)
Q Consensus 532 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~ 611 (1033)
+|++++ +|..+..+++|+.|+|++|+++ .+|..++.+++|+.|+|++|+|++. | +..+++|+.|+|++|+++|..
T Consensus 287 ~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 287 NNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp TSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChh
Confidence 999985 6777888999999999999998 6888889999999999999999854 3 667889999999999999875
Q ss_pred CCcccccccccccccccccccCCccccCCCCC
Q 042075 612 PTEGVFRNASITSVLGNLKLCGGTHEFRLPTC 643 (1033)
Q Consensus 612 p~~~~~~~~~~~~~~~n~~lcg~~~~~~~~~~ 643 (1033)
+. ..+..+....+.++...|+.+.......|
T Consensus 362 ~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~c 392 (597)
T 3oja_B 362 LR-ALFRNVARPAVDDADQHCKIDYQLEHGLC 392 (597)
T ss_dssp HH-HHTTTCCTTTBCCCCCCCCTTCEEETTEE
T ss_pred HH-HHHHHHhhhccccccccCCcchhccCCcc
Confidence 43 34566666778889999998665544444
No 192
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=358.42 Aligned_cols=276 Identities=21% Similarity=0.295 Sum_probs=195.6
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCch-hHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
++|++.+.||+|+||+||+|++..+++.||||+++..... ....+.+|++++++++||||+++++++ ..++..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEE
Confidence 5799999999999999999999989999999998743322 122455799999999999999999995 4456889
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEee
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGD 869 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 869 (1033)
+||||++ |+|.+++.. ....+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDD---------CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEcc
Confidence 9999997 599998853 345689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC-
Q 042075 870 FGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP- 947 (1033)
Q Consensus 870 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~- 947 (1033)
||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ...........
T Consensus 144 fg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 220 (324)
T 3mtl_A 144 FGLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTP 220 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred CcccccccCCccc--cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 9999865433222 122348999999999876 568999999999999999999999996432111 11111111100
Q ss_pred --cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 --DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 --~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
......... ........................+++.+++.+||+.||++|||++|+++.
T Consensus 221 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 221 TEETWPGILSN-----EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CTTTSTTGGGC-----HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ChHhchhhhcc-----hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 001110000 000000000000000011111234568999999999999999999999874
No 193
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=361.56 Aligned_cols=269 Identities=16% Similarity=0.153 Sum_probs=205.7
Q ss_pred hCCCCccceecccCceeEEEEEeCC--------CCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeE--------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDE--------GKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKI-------- 773 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l-------- 773 (1033)
.++|++.+.||+|+||.||+|++.. .++.||||+++.. +.+.+|++++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999986 3789999998743 457899999999999999984
Q ss_pred -------eeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 042075 774 -------LTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP 846 (1033)
Q Consensus 774 -------~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 846 (1033)
++++ ...++..++||||+ +++|.+++.. .....+++.++..++.||+.||+|||++ +
T Consensus 116 ~~~i~~~~~~~----~~~~~~~~lv~e~~-~~~L~~~l~~--------~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ 179 (352)
T 2jii_A 116 LLAIPTCMGFG----VHQDKYRFLVLPSL-GRSLQSALDV--------SPKHVLSERSVLQVACRLLDALEFLHEN---E 179 (352)
T ss_dssp TCSCCCCCEEE----EETTTEEEEEEECC-CEEHHHHHHH--------SGGGCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ccCccchhhcc----ccCCcEEEEEecCC-CcCHHHHHHh--------CCcCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4443 22356789999999 9999999953 1246799999999999999999999999 9
Q ss_pred cEeccCCCCCeEecCCC--cEEEeecccceecCCCCccc-----cccccccccccccccccCCCCCCcccchHHHHHHHH
Q 042075 847 IVHCDLKPSNVLLDEEM--IAHVGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLL 919 (1033)
Q Consensus 847 ivHrDlkp~NIll~~~~--~~kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ 919 (1033)
|+||||||+||+++.++ .+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|
T Consensus 180 ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 259 (352)
T 2jii_A 180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML 259 (352)
T ss_dssp CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 99999999999999998 99999999998764332111 112235899999999999999999999999999999
Q ss_pred HHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCC
Q 042075 920 ELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMES 999 (1033)
Q Consensus 920 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 999 (1033)
||++|+.||................. ........+.... ....++++.+++.+||+.|
T Consensus 260 el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~d 317 (352)
T 2jii_A 260 KWLYGFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCGH---------------------WIRPSETLQKYLKVVMALT 317 (352)
T ss_dssp HHHHSCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTSC---------------------EECCCHHHHHHHHHHHTCC
T ss_pred HHHhCCCCcccCCcCHHHHHHHHHhc-cCChhhhhhhccc---------------------cCCCcHHHHHHHHHHHhCC
Confidence 99999999974332221121111110 0000000000000 0012356899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh
Q 042075 1000 PEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 1000 P~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
|++|||++|+++.|+++.+...
T Consensus 318 p~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 318 YEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTCCCCHHHHHHHHHHHHHHTT
T ss_pred hhhCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999987654
No 194
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.3e-38 Score=362.72 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=193.5
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--------chhHHHHHHHHHHHHhcCCCCceeEeeeecc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--------HGAFKSFIAECNTLKNIRHRNLVKILTACSG 779 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 779 (1033)
...++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999999999999999987432 112235789999999999999999999852
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (1033)
.+..++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 211 -----~~~~~lv~e~~~~g~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll 272 (419)
T 3i6u_A 211 -----AEDYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLL 272 (419)
T ss_dssp -----SSEEEEEEECCTTCBGGGGTS----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred -----cCceEEEEEcCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEE
Confidence 234789999999999999984 345689999999999999999999999 99999999999999
Q ss_pred cCC---CcEEEeecccceecCCCCccccccccccccccccccccCC---CCCCcccchHHHHHHHHHHHhCCCCCCcccc
Q 042075 860 DEE---MIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG---SEVSINGDVYSYGILLLELVTRKKPTDIMFE 933 (1033)
Q Consensus 860 ~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~vl~elltg~~p~~~~~~ 933 (1033)
+.+ +.+||+|||+|+........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 273 ~~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 273 SSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp SSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred ecCCCcceEEEeecccceecCCCccc---cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 754 45999999999876543222 22458999999999853 5688999999999999999999999964322
Q ss_pred CCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 934 GDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ............... ....+.++++.+++.+||+.||++|||++|+++.
T Consensus 350 ~~-~~~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 350 QV-SLKDQITSGKYNFIP---------------------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp SC-CHHHHHHTTCCCCCH---------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hH-HHHHHHhcCCCCCCc---------------------------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 21 111111110000000 0011234568999999999999999999999874
No 195
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.5e-38 Score=352.84 Aligned_cols=250 Identities=22% Similarity=0.236 Sum_probs=190.5
Q ss_pred hCCCCccceecccCceeEEEEEeC---CCCeEEEEEEeeccC----chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILD---EGKTIVAVKVFNLLH----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 782 (1033)
.++|++.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.++++++||||+++++++
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 90 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF----- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-----
Confidence 467999999999999999999984 578999999997532 23345678899999999999999999995
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~ 862 (1033)
..++..++||||+++++|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLE----------REGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTT
T ss_pred EcCCEEEEEEeCCCCCcHHHHHH----------hCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCC
Confidence 44568999999999999999994 234688999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 042075 863 MIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~ 942 (1033)
+.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+....
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~ 234 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGTV--THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTIDKIL 234 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred CcEEEEeCCcccccccCCcc--ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence 99999999999764332221 12245899999999999999999999999999999999999998632110 0011111
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-----DMTNVVHQ 1012 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1012 (1033)
.. .. ..+...++++.+++.+||+.||++|| ++.|+++.
T Consensus 235 ~~------------~~--------------------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 235 KC------------KL--------------------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HT------------CC--------------------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred hC------------CC--------------------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 00 00 00011235689999999999999999 67777663
No 196
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.5e-38 Score=354.52 Aligned_cols=268 Identities=23% Similarity=0.368 Sum_probs=203.3
Q ss_pred hCCCCccceecccCceeEEEEE-----eCCCCeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGI-----LDEGKTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|++.+.||+|+||.||+|+ ...+++.||||+++.. ......++.+|+.++++++||||+++++++ .
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-----c
Confidence 4689999999999999999999 4456788999999743 334456789999999999999999999995 3
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC--
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE-- 861 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-- 861 (1033)
..+..++||||+++++|.+++...... ......+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPR---PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCC---SSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhccc---ccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC
Confidence 455789999999999999999653221 12335689999999999999999999999 9999999999999984
Q ss_pred -CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHH
Q 042075 862 -EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 862 -~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~ 939 (1033)
+..+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~ 255 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVL 255 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHH
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHH
Confidence 44699999999976543332222233447899999999988899999999999999999998 9999853211 1111
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
......... ..+..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 256 ~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 256 EFVTSGGRM------------------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhcCCCC------------------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111100000 00012345689999999999999999999999999998764
Q ss_pred h
Q 042075 1020 L 1020 (1033)
Q Consensus 1020 ~ 1020 (1033)
.
T Consensus 306 ~ 306 (327)
T 2yfx_A 306 P 306 (327)
T ss_dssp H
T ss_pred H
Confidence 4
No 197
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-38 Score=347.45 Aligned_cols=254 Identities=23% Similarity=0.278 Sum_probs=196.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ...+..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYHNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCCeE
Confidence 357999999999999999999999899999999987543 33457889999999999999999999995 445578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCCcE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEMIA 865 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~ 865 (1033)
++||||+++|+|.+++... ......+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~ 166 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSA------QARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPI 166 (285)
T ss_dssp EEEECCCSCCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHhh------hhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCE
Confidence 9999999999999998531 12336689999999999999999999999 99999999999999 456789
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||++......... ....||+.|+|||++. ..++.++||||+||++|||++|+.||...... .........
T Consensus 167 kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~ 240 (285)
T 3is5_A 167 KIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYK 240 (285)
T ss_dssp EECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC
T ss_pred EEEeeecceecCCcccC---cCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccC
Confidence 99999999865443222 2234899999999875 56899999999999999999999998632111 111100000
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
.+. ..... ...++++.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~---------~~~~~-------------------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 241 EPN---------YAVEC-------------------RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCC---------CCC---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Ccc---------ccccc-------------------CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00000 001345889999999999999999999985
No 198
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.5e-38 Score=351.53 Aligned_cols=269 Identities=17% Similarity=0.208 Sum_probs=207.6
Q ss_pred CCCCCCCHHHHHHhhCCCCcc-ceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhc-CCCCce
Q 042075 696 NSFPNISYQNLYNATDGFTSA-NLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNI-RHRNLV 771 (1033)
Q Consensus 696 ~~~~~~~~~~l~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv 771 (1033)
..-+++.++....-.++|.+. +.||+|+||.||+|++..+++.||+|+++... ......+.+|+.+++++ .||||+
T Consensus 13 ~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv 92 (327)
T 3lm5_A 13 LGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92 (327)
T ss_dssp ---CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBC
T ss_pred ccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEE
Confidence 344566666666777788887 89999999999999999999999999987432 23357789999999999 569999
Q ss_pred eEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEecc
Q 042075 772 KILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCD 851 (1033)
Q Consensus 772 ~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrD 851 (1033)
++++++ ...+..++||||+++|+|.+++.. .....+++.++..++.|++.||+|||++ ||+|||
T Consensus 93 ~~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~D 156 (327)
T 3lm5_A 93 NLHEVY-----ENTSEIILILEYAAGGEIFSLCLP--------ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLD 156 (327)
T ss_dssp CEEEEE-----ECSSEEEEEEECCTTEEGGGGGSS--------CC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred EEEEEE-----EeCCeEEEEEEecCCCcHHHHHHH--------hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCc
Confidence 999995 455689999999999999999853 2345689999999999999999999999 999999
Q ss_pred CCCCCeEecC---CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 042075 852 LKPSNVLLDE---EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 852 lkp~NIll~~---~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
|||+||+++. ++.+||+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (327)
T 3lm5_A 157 LKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233 (327)
T ss_dssp CCGGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CChHHEEEecCCCCCcEEEeeCccccccCCccccc---cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999987 7899999999998765433222 234899999999999999999999999999999999999998
Q ss_pred CccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 042075 929 DIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTN 1008 (1033)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 1008 (1033)
......+ .+......... ... .....+++.+.+++.+||+.||++|||++|
T Consensus 234 ~~~~~~~-~~~~i~~~~~~-~~~---------------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ 284 (327)
T 3lm5_A 234 VGEDNQE-TYLNISQVNVD-YSE---------------------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEI 284 (327)
T ss_dssp CCSSHHH-HHHHHHHTCCC-CCT---------------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCchH-HHHHHHhcccc-cCc---------------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence 6321110 01111000000 000 000123456889999999999999999999
Q ss_pred HHHH
Q 042075 1009 VVHQ 1012 (1033)
Q Consensus 1009 vl~~ 1012 (1033)
+++.
T Consensus 285 ll~h 288 (327)
T 3lm5_A 285 CLSH 288 (327)
T ss_dssp HTTC
T ss_pred HhCC
Confidence 9864
No 199
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.2e-40 Score=363.53 Aligned_cols=277 Identities=22% Similarity=0.320 Sum_probs=187.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHh--cCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKN--IRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence 367999999999999999999875 788999998643 33567788888888 79999999999964322 11126
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHH--------hCCCCCcEeccCCCCCeEe
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLH--------HDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivHrDlkp~NIll 859 (1033)
.++||||+++|+|.++++. ..+++.++..++.|++.||+||| +. +|+||||||+||++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~ 141 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 141 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-C
T ss_pred eEEEEeccCCCCHHHHHhc-----------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEE
Confidence 7999999999999999942 35778889999999999999999 77 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccc--cccccccccccccccccCCC------CCCcccchHHHHHHHHHHHhCCCCCCcc
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQT--SSIFAKGSIGYIAPEYGLGS------EVSINGDVYSYGILLLELVTRKKPTDIM 931 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~vl~elltg~~p~~~~ 931 (1033)
+.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..|+...
T Consensus 142 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999997654433221 11223589999999998776 4557899999999999999995544321
Q ss_pred ccCCccHHHHHhh--hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 042075 932 FEGDMNLHNFAKT--ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNV 1009 (1033)
Q Consensus 932 ~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 1009 (1033)
......+...... .................. ..+ ....++++.+.+++.+||+.||++|||++||
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 288 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI------------PNR-WQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCC------------CGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred ceeeccccccCCCCccHHHHHHHHHHhhcCCCc------------ccc-ccchhhHHHHHHHHHHHhccCcccCCCHHHH
Confidence 1111111000000 000000011111111000 000 0112566789999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042075 1010 VHQLQSIKNI 1019 (1033)
Q Consensus 1010 l~~L~~i~~~ 1019 (1033)
++.|+++.+.
T Consensus 289 ~~~L~~l~~~ 298 (303)
T 3gxj_A 289 KKTLSQLSQQ 298 (303)
T ss_dssp HHHHHC-CCC
T ss_pred HHHHHHhhhh
Confidence 9999988643
No 200
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.6e-38 Score=356.15 Aligned_cols=279 Identities=24% Similarity=0.319 Sum_probs=194.2
Q ss_pred HHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
....++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++ ..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 104 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-----HH 104 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE-----EE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE-----ec
Confidence 3456789999999999999999999999999999999974332 2345678999999999999999999995 44
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe-----
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL----- 859 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----- 859 (1033)
++..++||||++ |+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||++
T Consensus 105 ~~~~~lv~e~~~-~~L~~~~~----------~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 105 NHRLHLIFEYAE-NDLKKYMD----------KNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp TTEEEEEEECCS-EEHHHHHH----------HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred CCEEEEEEecCC-CCHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 558999999997 59999984 334589999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCccH
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNL 938 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~ 938 (1033)
++++.+||+|||+++......... ....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~ 247 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QL 247 (329)
T ss_dssp --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred CccceEEECcCCCccccCCccccc--CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HH
Confidence 455569999999998764332221 223479999999998874 48999999999999999999999986432211 11
Q ss_pred HHHHhh-hCCcc-hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 939 HNFAKT-ALPDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 939 ~~~~~~-~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
...... ..+.. ....... ......... .......+........+++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 248 FKIFEVLGLPDDTTWPGVTA-LPDWKQSFP---KFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHCCCCTTTSTTGGG-STTCCTTCC---CCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCchhhhhhhhh-hhhhhhhhh---hhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 111111 11111 0000000 000000000 000000000111123466899999999999999999999976
No 201
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.6e-38 Score=360.65 Aligned_cols=283 Identities=19% Similarity=0.187 Sum_probs=188.9
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeecccc-ccC
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQG 784 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 784 (1033)
...++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|++++++++||||+++++++.... ...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 3457899999999999999999999999999999998643 2334577889999999999999999999975431 223
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
....++||||+ +++|.++++. ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~ 170 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC-----------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 170 (367)
T ss_dssp CCCCEEEEECC-CEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred CCeEEEEeccc-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCC
Confidence 35679999999 7899998842 4589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+.....
T Consensus 171 ~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~ 244 (367)
T 2fst_X 171 LKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILR 244 (367)
T ss_dssp EEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred EEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 999999999865432 122358999999999877 67899999999999999999999998632211 11111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. ......+.+......................-........+.+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 245 L-VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp H-HCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred H-hCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 1 1110001110000000000000000000000000011234568999999999999999999999874
No 202
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.2e-38 Score=355.92 Aligned_cols=254 Identities=20% Similarity=0.252 Sum_probs=198.2
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
..++|++.+.||+|+||.||+|+++.+++.||||+++.... ...+|++++.++ +||||+++++++ ..++.
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVY-----DDGKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEE-----ECSSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEE-----EcCCE
Confidence 35679999999999999999999999999999999975432 235688888888 799999999994 45568
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC----C
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE----M 863 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~----~ 863 (1033)
.|+||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||++.++ +
T Consensus 91 ~~lv~E~~~gg~L~~~i~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~ 157 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKIL----------RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPE 157 (342)
T ss_dssp EEEEECCCCSCBHHHHHH----------TCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGG
T ss_pred EEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcC
Confidence 999999999999999984 234689999999999999999999999 99999999999998533 3
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
.+||+|||+++......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........
T Consensus 158 ~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~ 233 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILA 233 (342)
T ss_dssp GEEECCCTTCEECBCTTCCB--CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHH
T ss_pred eEEEEECCCcccCcCCCCce--eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHH
Confidence 59999999998764433221 224589999999999888899999999999999999999999963211 11111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....... . .... .....++++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~i~~~~~-~-----~~~~------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 234 RIGSGKF-S-----LSGG------------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHCCC-C-----CCST------------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHccCCc-c-----cCcc------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1000000 0 0000 001124568999999999999999999999875
No 203
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=361.05 Aligned_cols=261 Identities=13% Similarity=0.084 Sum_probs=205.4
Q ss_pred HHhhCCCCccceecccCceeEEEEE-----eCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC---CCCceeEeeeec
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGI-----LDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR---HRNLVKILTACS 778 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 778 (1033)
....++|++.+.||+|+||+||+|. ...+++.||||+++... ..++..|++++++++ |+||+++++++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~- 136 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAH- 136 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEE-
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheee-
Confidence 3456789999999999999999994 55678999999987543 356778888888886 99999999995
Q ss_pred cccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeE
Q 042075 779 GVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVL 858 (1033)
Q Consensus 779 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (1033)
..++..++||||+++|+|.++++.... .....+++.++..|+.||+.||+|||++ +|+||||||+|||
T Consensus 137 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIl 204 (365)
T 3e7e_A 137 ----LFQNGSVLVGELYSYGTLLNAINLYKN-----TPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFI 204 (365)
T ss_dssp ----ECSSCEEEEECCCCSCBHHHHHHHHHT-----STTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEE
T ss_pred ----ecCCCcEEEEeccCCCcHHHHHHHhhc-----ccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEE
Confidence 345578999999999999999953211 1345699999999999999999999999 9999999999999
Q ss_pred ecC-----------CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 042075 859 LDE-----------EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKP 927 (1033)
Q Consensus 859 l~~-----------~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p 927 (1033)
++. ++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 205 l~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p 284 (365)
T 3e7e_A 205 LGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284 (365)
T ss_dssp ECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred ecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence 998 899999999999865433333333445699999999999999999999999999999999999999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCC-CCH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDR-MDM 1006 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~ 1006 (1033)
|.....+... +........ ..+.+.+++..|++.+|.+| |++
T Consensus 285 f~~~~~~~~~----------------~~~~~~~~~---------------------~~~~~~~~~~~~l~~~p~~r~~~~ 327 (365)
T 3e7e_A 285 KVKNEGGECK----------------PEGLFRRLP---------------------HLDMWNEFFHVMLNIPDCHHLPSL 327 (365)
T ss_dssp CEEEETTEEE----------------ECSCCTTCS---------------------SHHHHHHHHHHHHCCCCTTCCCCH
T ss_pred cccCCCCcee----------------echhccccC---------------------cHHHHHHHHHHHcCCCCCCcchHH
Confidence 8532221100 000000000 12457889999999999999 578
Q ss_pred HHHHHHHHHHHHHh
Q 042075 1007 TNVVHQLQSIKNIL 1020 (1033)
Q Consensus 1007 ~evl~~L~~i~~~~ 1020 (1033)
+++.+.|+++.+..
T Consensus 328 ~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 328 DLLRQKLKKVFQQH 341 (365)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88999998887654
No 204
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-37 Score=342.03 Aligned_cols=258 Identities=20% Similarity=0.251 Sum_probs=202.9
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc------hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH------GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 784 (1033)
++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++ ..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----EN 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----cC
Confidence 568999999999999999999998999999999875322 1357789999999999999999999995 34
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC-
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM- 863 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~- 863 (1033)
.+..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 146 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLA----------EKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNV 146 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSS
T ss_pred CCeEEEEEeecCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCC
Confidence 557899999999999999994 235689999999999999999999999 999999999999998877
Q ss_pred ---cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHH
Q 042075 864 ---IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 864 ---~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~ 940 (1033)
.+||+|||.+......... ....|++.|+|||++.+..++.++||||||+++|||++|+.||..... . .
T Consensus 147 ~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~-~ 218 (283)
T 3bhy_A 147 PNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK----Q-E 218 (283)
T ss_dssp SSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH----H-H
T ss_pred CCCceEEEecccceeccCCCcc---cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch----H-H
Confidence 8999999999876543322 223489999999999999999999999999999999999999863211 1 1
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHHH
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ--LQSIKN 1018 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~ 1018 (1033)
....... ... .... ......++.+.+++.+||+.||++|||+.|+++. ++.++.
T Consensus 219 ~~~~~~~--------~~~-~~~~---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 219 TLTNISA--------VNY-DFDE---------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp HHHHHHT--------TCC-CCCH---------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred HHHHhHh--------ccc-CCcc---------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 1000000 000 0000 0011234568999999999999999999999984 555544
No 205
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.9e-38 Score=361.86 Aligned_cols=251 Identities=22% Similarity=0.357 Sum_probs=191.8
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcC--CCCceeEeeeeccccccCCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIR--HRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~ 786 (1033)
++|++.+.||+|+||.||+|.+.. ++.||||+++.. .....+.+.+|+.++++++ ||||+++++++. .++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-----~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-----cCC
Confidence 459999999999999999999874 889999998743 2344578899999999996 599999999853 445
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||| +.+++|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~k 194 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHH----------CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEE
T ss_pred EEEEEEe-cCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEE
Confidence 7999999 568899999953 34688899999999999999999999 999999999999995 57999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCC-----------CCCCcccchHHHHHHHHHHHhCCCCCCccccCC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-----------SEVSINGDVYSYGILLLELVTRKKPTDIMFEGD 935 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~ 935 (1033)
|+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~- 273 (390)
T 2zmd_A 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ- 273 (390)
T ss_dssp ECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-
T ss_pred EEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-
Confidence 999999987654433222233459999999999865 36899999999999999999999999632211
Q ss_pred ccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 936 MNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.... . .+++....... +...+.++.+++.+||+.||++|||+.|+++.
T Consensus 274 --~~~~-~--------~~~~~~~~~~~------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 --ISKL-H--------AIIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --HHHH-H--------HHHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHH-H--------HHhCccccCCC------------------CccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 1 11111100000 00012458899999999999999999999865
No 206
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.5e-38 Score=356.61 Aligned_cols=247 Identities=26% Similarity=0.340 Sum_probs=197.0
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
+.|++.+.||+|+||+||+|++..+++.||||+++... ....+++.+|++++++++||||+++++++. .++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCe
Confidence 45888999999999999999998899999999997432 233467889999999999999999999953 4458
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||++ |++.+++.. ....+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL 195 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKL 195 (348)
T ss_dssp EEEEEECCS-EEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEE
T ss_pred EEEEEecCC-CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEE
Confidence 899999997 688888742 345689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+|||+++...... ...||+.|+|||++. +..++.++|||||||++|||++|+.||....... ........
T Consensus 196 ~DfG~a~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~ 268 (348)
T 1u5q_A 196 GDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN 268 (348)
T ss_dssp CCCTTCBSSSSBC------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS
T ss_pred eeccCceecCCCC------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhc
Confidence 9999998654321 234899999999874 5678999999999999999999999985321110 01111110
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. +... ....++.+.+++.+||+.||++|||++|+++.
T Consensus 269 ~~---------~~~~---------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 269 ES---------PALQ---------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CC---------CCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CC---------CCCC---------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0000 00123458899999999999999999999864
No 207
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-38 Score=361.46 Aligned_cols=248 Identities=24% Similarity=0.258 Sum_probs=189.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHH-HHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNT-LKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|+++.+++.||||+++... ......+.+|..+ ++.++||||+++++++ ...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~~~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTA 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----ECS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EeC
Confidence 457999999999999999999999999999999997543 2233456677776 5678999999999994 455
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..|+||||++||+|.++++ ....+++..+..++.||+.||+|||++ ||+||||||+||+++.++++
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQ----------RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 68999999999999999994 234688999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........
T Consensus 179 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i 251 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNI 251 (373)
T ss_dssp EECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----HHHHHHHH
T ss_pred EEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHH
Confidence 9999999986432221 1223459999999999999999999999999999999999999986321 11111111
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVV 1010 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 1010 (1033)
...... .+...+.++.+++.+||+.||++||++.+.+
T Consensus 252 --------~~~~~~--------------------~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 252 --------LNKPLQ--------------------LKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp --------HHSCCC--------------------CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred --------HhcccC--------------------CCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 000000 0001234588999999999999999986433
No 208
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=353.43 Aligned_cols=269 Identities=22% Similarity=0.229 Sum_probs=196.8
Q ss_pred HHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeecccc---
Q 042075 706 LYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVD--- 781 (1033)
Q Consensus 706 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--- 781 (1033)
+.....+|++.++||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++....
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 3344568999999999999999999999899999999987666666678899999999995 999999999974221
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC--cEeccCCCCCeEe
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP--IVHCDLKPSNVLL 859 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll 859 (1033)
.......++||||+. |+|.+++... .....+++.++..++.||+.||+|||++ + |+||||||+||++
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~ 171 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLL 171 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHH-------HTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHh-------hccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEE
Confidence 134456899999995 7999988531 2345699999999999999999999998 7 9999999999999
Q ss_pred cCCCcEEEeecccceecCCCCccc----------ccccccccccccccccc---CCCCCCcccchHHHHHHHHHHHhCCC
Q 042075 860 DEEMIAHVGDFGLATFLPLSHAQT----------SSIFAKGSIGYIAPEYG---LGSEVSINGDVYSYGILLLELVTRKK 926 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlG~vl~elltg~~ 926 (1033)
+.++.+||+|||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~ 251 (337)
T 3ll6_A 172 SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH 251 (337)
T ss_dssp CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCC
Confidence 999999999999998765432211 11123489999999998 56678999999999999999999999
Q ss_pred CCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 042075 927 PTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM 1006 (1033)
Q Consensus 927 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 1006 (1033)
||...... .......... . .......+.+++.+||+.||++|||+
T Consensus 252 p~~~~~~~-----~~~~~~~~~~------------~------------------~~~~~~~~~~li~~~l~~~p~~Rps~ 296 (337)
T 3ll6_A 252 PFEDGAKL-----RIVNGKYSIP------------P------------------HDTQYTVFHSLIRAMLQVNPEERLSI 296 (337)
T ss_dssp CC-----------------CCCC------------T------------------TCCSSGGGHHHHHHHSCSSGGGSCCH
T ss_pred CCcchhHH-----HhhcCcccCC------------c------------------ccccchHHHHHHHHHccCChhhCcCH
Confidence 98532110 0000000000 0 00012337889999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 042075 1007 TNVVHQLQSIKNIL 1020 (1033)
Q Consensus 1007 ~evl~~L~~i~~~~ 1020 (1033)
.|+++.|+++.+..
T Consensus 297 ~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 297 AEVVHQLQEIAAAR 310 (337)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998754
No 209
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.8e-38 Score=371.02 Aligned_cols=250 Identities=21% Similarity=0.250 Sum_probs=192.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .......+.+|+.++++++||||++++++|. ..+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-----~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-----ETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-----eCC
Confidence 46799999999999999999999999999999999743 2334466788999999999999999999953 445
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCcEeccCCCCCeEecCCCcE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHH-DCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
..++||||+++|+|.+++. ....+++..+..++.||+.||+|||+ . ||+||||||+||+++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLS----------RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCE
Confidence 7899999999999999984 34568999999999999999999998 7 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 289 kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i 361 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELI 361 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH
T ss_pred EEccCCCceeccCCCcc--cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHH
Confidence 99999999864332221 2234599999999999999999999999999999999999999853211 1111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-----DMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 1012 (1033)
.... . . .+...++++.+++.+||+.||++|| +++|+++.
T Consensus 362 ~~~~--------~-~-------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 362 LMEE--------I-R-------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHCC--------C-C-------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HhCC--------C-C-------------------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0000 0 0 0011235689999999999999999 99999863
No 210
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-37 Score=344.96 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=204.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.+.|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++. .++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeE
Confidence 457999999999999999999999899999999997543 344578999999999999999999999954 34578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.+++.. ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 96 ~lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEEECCTTEEHHHHHTT-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEe
Confidence 999999999999999842 4589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCc
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
|||.+.......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..........+.
T Consensus 162 Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~ 237 (303)
T 3a7i_A 162 DFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNPP 237 (303)
T ss_dssp CCTTCEECBTTBCCB--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCC
T ss_pred ecccceecCcccccc--CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCCC
Confidence 999998765433221 2245899999999999999999999999999999999999998632111 011111000000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQ 1014 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1014 (1033)
... ...+..+.+++.+||+.||++|||+.|+++..-
T Consensus 238 --------~~~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 238 --------TLE----------------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp --------CCC----------------------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred --------CCc----------------------cccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 000 012345899999999999999999999998644
No 211
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9e-38 Score=346.26 Aligned_cols=252 Identities=21% Similarity=0.222 Sum_probs=199.5
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|+.++++++||||+++++++ ...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTHYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCEEE
Confidence 45799999999999999999999989999999999865544556788999999999999999999995 4456889
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCCcEE
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEMIAH 866 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 866 (1033)
+||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+|
T Consensus 83 lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~k 149 (304)
T 2jam_A 83 LVMQLVSGGELFDRIL----------ERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIM 149 (304)
T ss_dssp EEECCCCSCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEE
T ss_pred EEEEcCCCccHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEE
Confidence 9999999999999984 234689999999999999999999999 99999999999999 7888999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||.+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...........
T Consensus 150 l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~ 224 (304)
T 2jam_A 150 ITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYY 224 (304)
T ss_dssp BCSCSTTCCCCCBT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHCCC
T ss_pred EccCCcceecCCCc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCC
Confidence 99999997543321 11234899999999999999999999999999999999999998632111 00111111000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ..+ .....++++.+++.+||+.||++|||++|+++.
T Consensus 225 ~~-----~~~-----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 EF-----ESP-----------------------FWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CC-----CTT-----------------------TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CC-----Ccc-----------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 000 001123568999999999999999999999874
No 212
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8e-38 Score=344.89 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=203.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.++++++||||+++++++ ..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----ccCC
Confidence 46799999999999999999999999999999998743 233456788999999999999999999995 4455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.+++. ....+++.++..++.|+++||+|||++ +|+||||||+||++++++.+|
T Consensus 89 ~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 155 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHK----------RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 155 (294)
T ss_dssp EEEEEEECCTTCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred EEEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEE
Confidence 7899999999999999884 335689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||.+.......... ....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ........
T Consensus 156 l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~ 228 (294)
T 2rku_A 156 IGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIK 228 (294)
T ss_dssp ECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH
T ss_pred EEeccCceecccCcccc--ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHh
Confidence 99999998765332222 224489999999999998999999999999999999999999863211 11100000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... . . .+....+.+.+++.+||+.||++|||++|+++.
T Consensus 229 ~~~--------~-~-------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 229 KNE--------Y-S-------------------IPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTC--------C-C-------------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hcc--------C-C-------------------CccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 0 0 000123458899999999999999999999875
No 213
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.3e-38 Score=346.37 Aligned_cols=259 Identities=21% Similarity=0.259 Sum_probs=203.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++.+ ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence 468999999999999999999999899999999997532 3445778999999999999999999998642 23457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC-----cEeccCCCCCeEecCC
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP-----IVHCDLKPSNVLLDEE 862 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivHrDlkp~NIll~~~ 862 (1033)
.++||||+++++|.+++... ......+++.++..++.|++.||+|||+. + |+||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKG------TKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSS
T ss_pred EEEEEeCCCCCCHHHHHHhh------cccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCC
Confidence 89999999999999999531 11234589999999999999999999998 7 9999999999999999
Q ss_pred CcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 042075 863 MIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 863 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~ 942 (1033)
+.+||+|||.++......... ....|++.|+|||++.+..++.++||||||+++|||++|+.||..... .......
T Consensus 153 ~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i 228 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDTSFA--KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI 228 (279)
T ss_dssp SCEEECCCCHHHHC---CHHH--HHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred CCEEEecCchheeeccccccc--cccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHH
Confidence 999999999998764332211 123489999999999998999999999999999999999999863211 1111111
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQ 1014 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 1014 (1033)
...... .+ +...+.++.+++.+||+.||++|||++|+++.+.
T Consensus 229 ~~~~~~--------~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 229 REGKFR--------RI----------------------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHTCCC--------CC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred hhcccc--------cC----------------------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 100000 00 0112356899999999999999999999998654
No 214
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-37 Score=351.73 Aligned_cols=259 Identities=20% Similarity=0.302 Sum_probs=203.6
Q ss_pred HHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--------hhHHHHHHHHHHHHhc-CCCCceeE
Q 042075 703 YQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--------GAFKSFIAECNTLKNI-RHRNLVKI 773 (1033)
Q Consensus 703 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l 773 (1033)
+.......++|++.+.||+|+||.||+|++..+|+.||||+++.... ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 34444556789999999999999999999988899999999875331 1245678999999999 89999999
Q ss_pred eeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCC
Q 042075 774 LTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLK 853 (1033)
Q Consensus 774 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlk 853 (1033)
++++ ...+..++||||+++++|.+++. ....+++..+..++.||+.||+|||+. ||+|||||
T Consensus 166 ~~~~-----~~~~~~~lv~e~~~g~~L~~~l~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlk 227 (365)
T 2y7j_A 166 IDSY-----ESSSFMFLVFDLMRKGELFDYLT----------EKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLK 227 (365)
T ss_dssp EEEE-----EBSSEEEEEECCCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred EEEE-----eeCCEEEEEEEeCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 9995 44568999999999999999994 235689999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCC------CCCCcccchHHHHHHHHHHHhCCCC
Q 042075 854 PSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG------SEVSINGDVYSYGILLLELVTRKKP 927 (1033)
Q Consensus 854 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlG~vl~elltg~~p 927 (1033)
|+||++++++.+||+|||++......... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 228 p~NIl~~~~~~ikl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~p 304 (365)
T 2y7j_A 228 PENILLDDNMQIRLSDFGFSCHLEPGEKL---RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304 (365)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred HHHEEECCCCCEEEEecCcccccCCCccc---ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCC
Confidence 99999999999999999999877544322 22458999999998753 3588999999999999999999999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
|..... .......... ...... +.....+.++.+++.+||+.||++|||+.
T Consensus 305 f~~~~~--~~~~~~i~~~-----------~~~~~~----------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 355 (365)
T 2y7j_A 305 FWHRRQ--ILMLRMIMEG-----------QYQFSS----------------PEWDDRSSTVKDLISRLLQVDPEARLTAE 355 (365)
T ss_dssp SCCSSH--HHHHHHHHHT-----------CCCCCH----------------HHHSSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCH--HHHHHHHHhC-----------CCCCCC----------------cccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 853211 0000000000 000000 00011235689999999999999999999
Q ss_pred HHHH
Q 042075 1008 NVVH 1011 (1033)
Q Consensus 1008 evl~ 1011 (1033)
|+++
T Consensus 356 ell~ 359 (365)
T 2y7j_A 356 QALQ 359 (365)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9986
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.1e-38 Score=358.24 Aligned_cols=282 Identities=19% Similarity=0.168 Sum_probs=203.2
Q ss_pred CHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc-----------hhHHHHHHHHHHHHhcCCCCc
Q 042075 702 SYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH-----------GAFKSFIAECNTLKNIRHRNL 770 (1033)
Q Consensus 702 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni 770 (1033)
...++....++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34677788899999999999999999999987 489999999864221 123778999999999999999
Q ss_pred eeEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEec
Q 042075 771 VKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHC 850 (1033)
Q Consensus 771 v~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHr 850 (1033)
+++++++...........++||||++ |+|.+++.. ....+++.++..++.||+.||+|||++ +|+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~ 158 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---------QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHR 158 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCC
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEec
Confidence 99999975544344557899999997 688888853 345689999999999999999999999 99999
Q ss_pred cCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCC
Q 042075 851 DLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTD 929 (1033)
Q Consensus 851 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~ 929 (1033)
||||+||+++.++.+||+|||+++........ ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 159 DLHPGNILLADNNDITICDFNLAREDTADANK---THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp CCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCChHHEEEcCCCCEEEEecCccccccccccc---ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999854433222 22348999999999877 678999999999999999999999986
Q ss_pred ccccCCccHHHHHhhhCCcch-----------hhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCC
Q 042075 930 IMFEGDMNLHNFAKTALPDHV-----------VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSME 998 (1033)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 998 (1033)
..... ............... .+.+........ ............+.+.+++.+||+.
T Consensus 236 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~L~~ 303 (362)
T 3pg1_A 236 GSTFY-NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP-----------ARAWTAVVPTADPVALDLIAKMLEF 303 (362)
T ss_dssp CSSHH-HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCC-----------CCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred CCCHH-HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCC-----------hhhHHhhCCCCCHHHHHHHHHHhcC
Confidence 43211 111111111111110 011100000000 0000011112346689999999999
Q ss_pred CCCCCCCHHHHHHH
Q 042075 999 SPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 999 dP~~RPt~~evl~~ 1012 (1033)
||++|||++|+++.
T Consensus 304 dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 304 NPQRRISTEQALRH 317 (362)
T ss_dssp SGGGSCCHHHHHTS
T ss_pred ChhhCCCHHHHHcC
Confidence 99999999999874
No 216
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.8e-38 Score=353.45 Aligned_cols=286 Identities=21% Similarity=0.277 Sum_probs=202.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc---cC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---QG 784 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 784 (1033)
.++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999999899999999986432 2234578899999999999999999999754321 11
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
.+..++||||+++ +|.+.+.. ....+++.++..++.|++.||+|||++ ||+||||||+||+++.++.
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN---------VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGV 162 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred CceEEEEEeccCC-CHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCC
Confidence 4568999999975 77777742 334689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCcc--ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHH
Q 042075 865 AHVGDFGLATFLPLSHAQ--TSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNF 941 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~ 941 (1033)
+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .....
T Consensus 163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 241 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALI 241 (351)
T ss_dssp EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 999999999876533221 22223458999999999876 458999999999999999999999986432111 11111
Q ss_pred Hhh--hCCcchhhhccc-ccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 942 AKT--ALPDHVVDIVDS-TLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 942 ~~~--~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... ..+.......+. ....... ...................+.+.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYELYEKLE---LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCGGGTSSC---CCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhCCCChhhccccccchhhcccc---cccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111 111111111100 0000000 0000000000000011123568899999999999999999999874
No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-37 Score=364.06 Aligned_cols=266 Identities=20% Similarity=0.253 Sum_probs=206.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
.++|++.++||+|+||.||+|++..+++.||||+++.... ..++.+|+++++.++|++.+..+.++ ....+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~----~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWF----GVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEE----EEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEE----EeeCCEEE
Confidence 4689999999999999999999988999999999875433 24578999999999875544444443 23455789
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCCcEE
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEMIAH 866 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 866 (1033)
+||||+ +++|.+++.. ....+++.+++.|+.||+.||+|||++ +|+||||||+|||+ ++++.+|
T Consensus 80 lvme~~-g~sL~~ll~~---------~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vk 146 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNF---------CSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVY 146 (483)
T ss_dssp EEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEE
T ss_pred EEEECC-CCCHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEE
Confidence 999999 9999999953 245699999999999999999999999 99999999999999 6889999
Q ss_pred EeecccceecCCCCccc-----cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCc--cHH
Q 042075 867 VGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDM--NLH 939 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~--~~~ 939 (1033)
|+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+.
T Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~ 226 (483)
T 3sv0_A 147 IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 226 (483)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHH
T ss_pred EEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHH
Confidence 99999998765443221 11234599999999999999999999999999999999999999974322110 011
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
........... ......+++++.+++..||+.||++||++++|++.|+++...
T Consensus 227 ~i~~~~~~~~~---------------------------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 227 KISEKKVATSI---------------------------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHHHHHSCH---------------------------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHhhccccccH---------------------------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 11000000000 000112346799999999999999999999999999999765
Q ss_pred hh
Q 042075 1020 LL 1021 (1033)
Q Consensus 1020 ~~ 1021 (1033)
..
T Consensus 280 ~~ 281 (483)
T 3sv0_A 280 EG 281 (483)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 218
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.7e-38 Score=356.47 Aligned_cols=280 Identities=23% Similarity=0.302 Sum_probs=200.2
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++. ..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~ 97 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKK 97 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETT
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCC
Confidence 34689999999999999999999998999999999864332 23456789999999999999999999953 455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.++.. ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+|
T Consensus 98 ~~~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~k 164 (331)
T 4aaa_A 98 RWYLVFEFVDHTILDDLEL----------FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVK 164 (331)
T ss_dssp EEEEEEECCSEEHHHHHHH----------STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCcchHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEE
Confidence 7899999999999998873 334689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||.++......... ....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .........
T Consensus 165 l~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 241 (331)
T 4aaa_A 165 LCDFGFARTLAAPGEVY--DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCL 241 (331)
T ss_dssp ECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred EEeCCCceeecCCcccc--CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHh
Confidence 99999998654432221 223489999999998775 78999999999999999999999986432211 111111100
Q ss_pred --CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 --LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 --~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..+.................. ..............+++++.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 242 GNLIPRHQELFNKNPVFAGVRLP---EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CSCCHHHHHHHHHCGGGTTCCCC---CCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCChhhhhHhhhccccccccCc---cccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000000000000000 0000000000111245679999999999999999999999875
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=351.83 Aligned_cols=273 Identities=23% Similarity=0.291 Sum_probs=202.3
Q ss_pred CCCCCCCCHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeE
Q 042075 695 INSFPNISYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKI 773 (1033)
Q Consensus 695 ~~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 773 (1033)
..+...+++.++....++|++.+.||+|+||.||+|++..+++.||||+++.... ..+.+.+|+.+++++ +||||+++
T Consensus 8 ~~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~ 86 (326)
T 2x7f_A 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATY 86 (326)
T ss_dssp --------CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCE
T ss_pred CCcchhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeee
Confidence 3445566667777788999999999999999999999988999999999875433 347788999999999 89999999
Q ss_pred eeeecccccc-CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccC
Q 042075 774 LTACSGVDYQ-GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDL 852 (1033)
Q Consensus 774 ~~~~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDl 852 (1033)
++++...... ..+..++||||+++++|.+++.. .....+++..+..++.||+.||+|||++ ||+||||
T Consensus 87 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dl 155 (326)
T 2x7f_A 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN--------TKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDI 155 (326)
T ss_dssp EEEEEECC--CCCCEEEEEEECCTTEEHHHHHHH--------SGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred eeEEeeccCccccceEEEEEEcCCCCcHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence 9997542211 14578999999999999999953 2335689999999999999999999999 9999999
Q ss_pred CCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCC
Q 042075 853 KPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKP 927 (1033)
Q Consensus 853 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~vl~elltg~~p 927 (1033)
||+||+++.++.+||+|||++......... .....||+.|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 156 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 233 (326)
T 2x7f_A 156 KGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233 (326)
T ss_dssp SGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred cHHHEEEcCCCCEEEeeCcCceecCcCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999865432211 12234899999999987 56789999999999999999999999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
|....... .......... +... ....+..+.+++.+||+.||++|||++
T Consensus 234 ~~~~~~~~-~~~~~~~~~~---------~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ 282 (326)
T 2x7f_A 234 LCDMHPMR-ALFLIPRNPA---------PRLK---------------------SKKWSKKFQSFIESCLVKNHSQRPATE 282 (326)
T ss_dssp TTTSCHHH-HHHHHHHSCC---------CCCS---------------------CSCSCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCCcHHH-HHHHhhcCcc---------ccCC---------------------ccccCHHHHHHHHHHhccChhhCCCHH
Confidence 85321110 0000000000 0000 001235689999999999999999999
Q ss_pred HHHHH
Q 042075 1008 NVVHQ 1012 (1033)
Q Consensus 1008 evl~~ 1012 (1033)
|+++.
T Consensus 283 ~ll~h 287 (326)
T 2x7f_A 283 QLMKH 287 (326)
T ss_dssp HHHTS
T ss_pred HHhhC
Confidence 99874
No 220
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.9e-38 Score=351.55 Aligned_cols=267 Identities=23% Similarity=0.380 Sum_probs=204.6
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEE--EEEEeecc-CchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCC
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIV--AVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 786 (1033)
++|++.+.||+|+||.||+|++..++..+ |+|+++.. .....+.+.+|+++++++ +||||+++++++ ...+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee-----eeCC
Confidence 47899999999999999999998788765 99988743 233456789999999999 999999999995 3455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCcc------ccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDE------TEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
..++||||+++|+|.+++........ .......+++.++..++.||+.||+|||++ ||+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 88999999999999999964210000 001235689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHH
Q 042075 861 EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 861 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~ 939 (1033)
.++.+||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~ 248 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----A 248 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----H
T ss_pred CCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----H
Confidence 99999999999997432211 1122337889999999988889999999999999999998 9999853211 1
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
....... .. . +...+..+++++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 249 ~~~~~~~-~~--------~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 249 ELYEKLP-QG--------Y------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HHHHHGG-GT--------C------------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHhh-cC--------C------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111100 00 0 0000112245689999999999999999999999999998765
Q ss_pred h
Q 042075 1020 L 1020 (1033)
Q Consensus 1020 ~ 1020 (1033)
.
T Consensus 302 ~ 302 (327)
T 1fvr_A 302 R 302 (327)
T ss_dssp S
T ss_pred h
Confidence 4
No 221
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=342.94 Aligned_cols=253 Identities=22% Similarity=0.273 Sum_probs=196.4
Q ss_pred CCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeEE
Q 042075 712 GFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 791 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 791 (1033)
+|.....||+|+||.||+|++..+++.||||+++.......+.+.+|+.++++++||||+++++++. ..+..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-----ENGFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE-----eCCcEEEE
Confidence 4555669999999999999999899999999998766666688999999999999999999999953 44578999
Q ss_pred EEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC-CCcEEEeec
Q 042075 792 FEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE-EMIAHVGDF 870 (1033)
Q Consensus 792 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kL~Df 870 (1033)
|||+++++|.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 98 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Df 167 (295)
T 2clq_A 98 MEQVPGGSLSALLRSK-------WGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDF 167 (295)
T ss_dssp EECCSEEEHHHHHHHT-------TCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCT
T ss_pred EEeCCCCCHHHHHHhh-------ccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeec
Confidence 9999999999999531 1234567888999999999999999999 9999999999999987 899999999
Q ss_pred ccceecCCCCccccccccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCc
Q 042075 871 GLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSE--VSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 871 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
|.+.......... ....||+.|+|||++.+.. ++.++||||||+++|||++|+.||..................
T Consensus 168 g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-- 243 (295)
T 2clq_A 168 GTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV-- 243 (295)
T ss_dssp TTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCC--
T ss_pred ccccccCCCCCcc--cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccc--
Confidence 9998764432211 2234899999999987643 789999999999999999999998532111100000000000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
.+. .+...++++.+++.+||+.||++|||++|+++
T Consensus 244 ------~~~----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 ------HPE----------------------IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ------CCC----------------------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ------ccc----------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 01123456899999999999999999999976
No 222
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.2e-38 Score=368.54 Aligned_cols=257 Identities=23% Similarity=0.329 Sum_probs=203.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.++||+|+||.||+|+++.+++.||+|+++... ....+.+.+|++++++++||||+++++++ ...+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETKT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeCC
Confidence 367899999999999999999999899999999997432 23346788999999999999999999984 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..|+||||++||+|.+++.... .....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~------~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vk 329 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVD------EDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSS------TTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhh------cccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEE
Confidence 8999999999999999986421 1245689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 330 L~DFGla~~~~~~~~~~--~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~ 406 (543)
T 3c4z_A 330 ISDLGLAVELKAGQTKT--KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVL 406 (543)
T ss_dssp ECCCTTCEECCTTCCCB--CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHH
T ss_pred EeecceeeeccCCCccc--ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHh
Confidence 99999998765443222 22359999999999999999999999999999999999999996432111 1111111110
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM-----TNVVH 1011 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 1011 (1033)
.... ..+...++.+.+++.+||+.||++||++ +++++
T Consensus 407 --------~~~~--------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 407 --------EQAV--------------------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --------HCCC--------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --------hccc--------------------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0000 0001224568999999999999999975 55554
No 223
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.5e-38 Score=351.27 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=204.0
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
..++|.+.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.++++++||||+++++++ ...
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 113 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDN 113 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecC
Confidence 346799999999999999999999999999999998743 234457788999999999999999999995 445
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++++|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 114 ~~~~lv~e~~~~~~L~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 180 (335)
T 2owb_A 114 DFVFVVLELCRRRSLLELHK----------RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEV 180 (335)
T ss_dssp SEEEEEECCCTTCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCE
T ss_pred CeEEEEEecCCCCCHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCE
Confidence 58899999999999999884 335689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
||+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+.......
T Consensus 181 kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 257 (335)
T 2owb_A 181 KIGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNE 257 (335)
T ss_dssp EECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTC
T ss_pred EEeeccCceecccCcccc--cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCC
Confidence 999999998765332221 22448999999999999999999999999999999999999986321110 000000000
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. .. +......+.+++.+||+.||++|||++|+++.
T Consensus 258 ~----------~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 Y----------SI----------------------PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp C----------CC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C----------CC----------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00 00123458899999999999999999999874
No 224
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.8e-37 Score=353.66 Aligned_cols=282 Identities=19% Similarity=0.165 Sum_probs=196.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeecccc-ccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46899999999999999999999989999999998753 2344567889999999999999999999975432 12334
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||++ ++|.+++. ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEcCC-CCHHHHHh------------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEE
Confidence 6899999996 57888873 2378899999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||+++........ ....||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+..... ..
T Consensus 168 l~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~-~~ 242 (371)
T 2xrw_A 168 ILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIE-QL 242 (371)
T ss_dssp ECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC--C
T ss_pred EEEeeccccccccccc---CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-Hh
Confidence 9999999865433221 22348999999999999999999999999999999999999986421110 1111111 00
Q ss_pred Ccc-----------hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDH-----------VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~-----------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... .....................................++.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 000000000000000000000000000111123346789999999999999999999999875
No 225
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.4e-37 Score=341.11 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=201.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDRK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcCC
Confidence 357999999999999999999999899999999986432 22346789999999999999999999995 4456
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 154 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQK----------HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEEEeCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEE
Confidence 88999999999999999952 34689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
|+|||.+........ ....|++.|+|||++.+..++.++||||||+++|||++|+.||...... .......
T Consensus 155 l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~ 225 (284)
T 2vgo_A 155 IADFGWSVHAPSLRR----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHRRIV 225 (284)
T ss_dssp ECCCTTCEECSSSCB----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHH
T ss_pred EecccccccCccccc----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHHHHh
Confidence 999999976543221 2234899999999999999999999999999999999999998632111 1111000
Q ss_pred CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... ... +...+.++.+++.+||+.||++|||++|+++.
T Consensus 226 ~~~------~~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 226 NVD------LKF----------------------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp TTC------CCC----------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ccc------cCC----------------------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 000 000 01123558899999999999999999999874
No 226
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=351.32 Aligned_cols=281 Identities=23% Similarity=0.264 Sum_probs=196.9
Q ss_pred HHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc-----hhHHHHHHHHHHHHhcCCCCceeEeeeecccc
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH-----GAFKSFIAECNTLKNIRHRNLVKILTACSGVD 781 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 781 (1033)
....++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---- 81 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF---- 81 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE----
Confidence 3446789999999999999999999998999999999874322 1235678999999999999999999995
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
...+..++||||+++ +|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 82 -~~~~~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 147 (346)
T 1ua2_A 82 -GHKSNISLVFDFMET-DLEVIIKD---------NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDE 147 (346)
T ss_dssp -CCTTCCEEEEECCSE-EHHHHHTT---------CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -eeCCceEEEEEcCCC-CHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcC
Confidence 445688999999975 89888853 334688889999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHH
Q 042075 862 EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~ 940 (1033)
++.+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+..
T Consensus 148 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~ 224 (346)
T 1ua2_A 148 NGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTR 224 (346)
T ss_dssp TCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred CCCEEEEecccceeccCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 999999999999876433222 2224489999999998764 5899999999999999999999998632211 11111
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
............+.+.....+.... ....... ........++++.+++.+||+.||++|||++|+++.
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDMCSLPDYVTF---KSFPGIP-LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCC---CCCCCCC-HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHcCCCChhhhhhhccCcccccc---cccCCCC-hHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1111111100000000000000000 0000000 000011234678999999999999999999999874
No 227
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.7e-38 Score=358.91 Aligned_cols=291 Identities=19% Similarity=0.178 Sum_probs=203.2
Q ss_pred HHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc----
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---- 782 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 782 (1033)
....++|++.+.||+|+||+||+|++..+++.||||++..... ...+|++++++++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999998999999999864322 22479999999999999999999744221
Q ss_pred -----------------------------cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHH
Q 042075 783 -----------------------------QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVA 833 (1033)
Q Consensus 783 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 833 (1033)
..+...++||||++ |+|.+.++.. ......+++..+..++.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSF------IRSGRSIPMNLISIYIYQLF 151 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHH------HhcCCCCCHHHHHHHHHHHH
Confidence 23445889999997 5888877431 12346789999999999999
Q ss_pred HHHHHHHhCCCCCcEeccCCCCCeEec-CCCcEEEeecccceecCCCCccccccccccccccccccccCCC-CCCcccch
Q 042075 834 CALSYLHHDCQPPIVHCDLKPSNVLLD-EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDV 911 (1033)
Q Consensus 834 ~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv 911 (1033)
+||+|||++ ||+||||||+||+++ +++.+||+|||+|+......... ...+|+.|+|||++.+. .++.++||
T Consensus 152 ~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (383)
T 3eb0_A 152 RAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV---AYICSRFYRAPELMLGATEYTPSIDL 225 (383)
T ss_dssp HHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC---CCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred HHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc---CcccCCCccCHHHhcCCCCCCcchhh
Confidence 999999999 999999999999998 68899999999998765443322 23489999999998775 58999999
Q ss_pred HHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHH
Q 042075 912 YSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARI 991 (1033)
Q Consensus 912 wSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 991 (1033)
||+||++|||++|+.||...... ..+.......-......+.... ..+..... ........+...+...++++.++
T Consensus 226 wslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMN--PHYTEVRF-PTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHC--TTC--CCC-CCCCCCCHHHHSCTTCCHHHHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhC--cccccccC-CccCcccHHhhCCCCCCHHHHHH
Confidence 99999999999999998643211 1111221111111100000000 00000000 00000000011111244668999
Q ss_pred HhhccCCCCCCCCCHHHHHHH--HHHHHH
Q 042075 992 GVACSMESPEDRMDMTNVVHQ--LQSIKN 1018 (1033)
Q Consensus 992 ~~~cl~~dP~~RPt~~evl~~--L~~i~~ 1018 (1033)
+.+||+.||++|||+.|+++. +++++.
T Consensus 302 i~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred HHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 999999999999999999864 555544
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-37 Score=353.59 Aligned_cols=288 Identities=20% Similarity=0.176 Sum_probs=204.7
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++... .....++.+|++++++++||||+++++++....+.....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3568999999999999999999999899999999997433 334567889999999999999999999976555555678
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||++ ++|.+++.. ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl 153 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST-----------QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKV 153 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EEEEEeccC-ccHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEE
Confidence 899999996 699998842 4589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccc--------cccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccH
Q 042075 868 GDFGLATFLPLSHAQT--------SSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNL 938 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~ 938 (1033)
+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+
T Consensus 154 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~ 232 (353)
T 2b9h_A 154 CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QL 232 (353)
T ss_dssp CCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HH
T ss_pred EecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HH
Confidence 9999998765332211 1122358999999998654 678999999999999999999999986432111 11
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.......-.................+....................++++.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11111000000000000000000000000000000000000111345678999999999999999999999874
No 229
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-38 Score=361.58 Aligned_cols=260 Identities=15% Similarity=0.131 Sum_probs=193.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeec---cCchhHHHHHHHHH---HHHhcCCCCceeEeeeecccc--
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNL---LHHGAFKSFIAECN---TLKNIRHRNLVKILTACSGVD-- 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~-- 781 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++. ......+.+.+|++ ++++++||||+++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4678899999999999999999988899999999973 23345578899994 555558999999984432100
Q ss_pred ccCC------------C-----ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCC
Q 042075 782 YQGN------------D-----FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQ 844 (1033)
Q Consensus 782 ~~~~------------~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 844 (1033)
+... + ..|+||||+ +|+|.+++...... ......+++..+..|+.||+.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 225 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY-- 225 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHT---TTTTHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccc---ccccccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 1111 1 378999999 68999999642110 11224456688999999999999999999
Q ss_pred CCcEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCC-----------CCCcccchHH
Q 042075 845 PPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-----------EVSINGDVYS 913 (1033)
Q Consensus 845 ~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwS 913 (1033)
+|+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++||||
T Consensus 226 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 226 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred -CeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 999999999999999999999999999986432 1122347 999999999887 8999999999
Q ss_pred HHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHh
Q 042075 914 YGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGV 993 (1033)
Q Consensus 914 lG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 993 (1033)
|||++|||++|+.||........ ...+.. .. ..+++++.+++.
T Consensus 299 lG~il~elltg~~Pf~~~~~~~~-------------~~~~~~-~~-----------------------~~~~~~~~~li~ 341 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALGG-------------SEWIFR-SC-----------------------KNIPQPVRALLE 341 (377)
T ss_dssp HHHHHHHHHHSSCCC------CC-------------SGGGGS-SC-----------------------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCcccccccc-------------hhhhhh-hc-----------------------cCCCHHHHHHHH
Confidence 99999999999999853211110 000000 00 012356899999
Q ss_pred hccCCCCCCCCCHHHHHH--HHHHHHHH
Q 042075 994 ACSMESPEDRMDMTNVVH--QLQSIKNI 1019 (1033)
Q Consensus 994 ~cl~~dP~~RPt~~evl~--~L~~i~~~ 1019 (1033)
+||+.||++|||+.|+++ .++++++.
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~~~ 369 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQLRTE 369 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHHHHH
Confidence 999999999999999997 45555543
No 230
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-37 Score=368.80 Aligned_cols=252 Identities=23% Similarity=0.260 Sum_probs=199.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.++||+|+||+||+|++..+++.||||+++.. .......+.+|++++++++||||+++++++ .....
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSSS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcCCE
Confidence 45799999999999999999999989999999998642 223457789999999999999999999995 44568
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec---CCCc
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD---EEMI 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~---~~~~ 864 (1033)
.++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++ .++.
T Consensus 96 ~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 162 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEII----------KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCD 162 (486)
T ss_dssp EEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCC
T ss_pred EEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCC
Confidence 999999999999999884 335689999999999999999999999 999999999999995 5568
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||+++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ..+......
T Consensus 163 ~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~ 237 (486)
T 3mwu_A 163 IKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETG 237 (486)
T ss_dssp EEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred EEEEECCcCeECCCCCcc---CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC
Confidence 999999999866543322 22359999999999876 5999999999999999999999998632111 001111110
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
...... +.....++++.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~----------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 238 KYAFDL----------------------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CCCSCS----------------------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCCC----------------------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 0001234568899999999999999999999875
No 231
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.6e-37 Score=347.26 Aligned_cols=252 Identities=20% Similarity=0.237 Sum_probs=195.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--------chhHHHHHHHHHHHHhcCCCCceeEeeeecccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--------HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 781 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--- 85 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--- 85 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc---
Confidence 467999999999999999999999999999999986432 112345789999999999999999999853
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
.+ ..++||||+++++|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 86 --~~-~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 86 --AE-DYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 149 (322)
T ss_dssp --SS-SEEEEEECCTTEETHHHHS----------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESS
T ss_pred --CC-ceEEEEecCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEec
Confidence 22 3799999999999999984 335689999999999999999999999 9999999999999987
Q ss_pred CCc---EEEeecccceecCCCCccccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCccccCC
Q 042075 862 EMI---AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGD 935 (1033)
Q Consensus 862 ~~~---~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~ 935 (1033)
++. +||+|||+++........ ....||+.|+|||++. ...++.++|||||||++|||++|+.||.......
T Consensus 150 ~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 226 (322)
T 2ycf_A 150 QEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226 (322)
T ss_dssp SSSSCCEEECCCTTCEECCCCHHH---HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS
T ss_pred CCCCCeEEEccCccceeccccccc---ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH
Confidence 654 999999999876543221 1234899999999863 5678999999999999999999999996432221
Q ss_pred ccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 936 MNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
. ............. . ......++++.+++.+||+.||++|||+.|+++
T Consensus 227 ~-~~~~~~~~~~~~~-----------~----------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 227 S-LKDQITSGKYNFI-----------P----------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp C-HHHHHHHTCCCCC-----------H----------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H-HHHHHHhCccccC-----------c----------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 1111111000000 0 001123456899999999999999999999985
No 232
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=375.75 Aligned_cols=260 Identities=24% Similarity=0.366 Sum_probs=202.7
Q ss_pred CCCccc-eecccCceeEEEEEeC--CCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 712 GFTSAN-LIGAGSFGSVYKGILD--EGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 712 ~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
++.+.+ .||+|+||.||+|.+. .++..||||+++... ....+++.+|++++++++||||++++++|.. +.
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~ 409 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EA 409 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SS
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CC
Confidence 344444 7999999999999875 356779999997543 3356789999999999999999999999642 35
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++|+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||
T Consensus 410 ~~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL 477 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKI 477 (613)
T ss_dssp EEEEEECCTTCBHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEE
T ss_pred eEEEEEeCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEE
Confidence 8999999999999999953 345689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhh
Q 042075 868 GDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .........
T Consensus 478 ~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~ 555 (613)
T 2ozo_A 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQG 555 (613)
T ss_dssp CCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTT
T ss_pred eeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcC
Confidence 999999876433221 11122235689999999998899999999999999999998 99998642211 111111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
. +...+..+++++.++|.+||+.||++||++.+|++.|+.+.....
T Consensus 556 ~------------------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 556 K------------------------------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp C------------------------------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred C------------------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 0 001112345679999999999999999999999999999876654
No 233
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=340.77 Aligned_cols=255 Identities=20% Similarity=0.290 Sum_probs=200.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC----chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 478999999999999999999999899999999997432 2345778999999999999999999998632 344
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...++||||++++ +.+++.. .....+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~--------~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~ 148 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDS--------VPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTL 148 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHH--------STTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CeEEEEehhccCC-HHHHHHh--------CcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcE
Confidence 5789999999876 7777743 2345689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSE--VSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
||+|||.+................||+.|+|||++.+.. ++.++||||||+++|||++|+.||.... ......
T Consensus 149 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~ 223 (305)
T 2wtk_C 149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFE 223 (305)
T ss_dssp EECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHH
T ss_pred EeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHH
Confidence 999999998765433333333445899999999987644 4789999999999999999999986321 111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... .... ..+..+++.+.+++.+||+.||++|||++|+++.
T Consensus 224 ~i~--------~~~~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 224 NIG--------KGSY--------------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHH--------HCCC--------------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHh--------cCCC--------------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0000 0001123568899999999999999999999875
No 234
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=378.89 Aligned_cols=261 Identities=28% Similarity=0.434 Sum_probs=207.6
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|++.. +..||||+++.... ..+++.+|++++++++||||++++++|.+ +..
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~ 336 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 336 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccc
Confidence 45678899999999999999999974 57799999975432 34789999999999999999999998632 468
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++|+|.++++. .....+++.+++.++.||+.||+|||++ +|+||||||+|||+++++.+||+
T Consensus 337 ~lv~e~~~~gsL~~~l~~--------~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 405 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKG--------ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 405 (535)
T ss_dssp EEEECCCTTEEHHHHHSH--------HHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred eEeeehhcCCcHHHHHhh--------cCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEc
Confidence 999999999999999953 2234589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..........
T Consensus 406 DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~~- 481 (535)
T 2h8h_A 406 DFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGY- 481 (535)
T ss_dssp CTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTTC-
T ss_pred ccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-
Confidence 9999986543211 11222346789999999988899999999999999999999 99998632111 0111110000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
+...+..+++++.++|.+||+.||++|||+++|++.|+++.....
T Consensus 482 -----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 482 -----------------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp -----------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred -----------------------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 001111345668999999999999999999999999998755443
No 235
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-37 Score=337.84 Aligned_cols=249 Identities=23% Similarity=0.308 Sum_probs=194.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecCC
Confidence 468999999999999999999999899999999987432 23346788999999999999999999995 3455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||+++++|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICK----------HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEE
Confidence 88999999999999999942 34589999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||.+......... ....+++.|+|||++.+..+ +.++||||||+++|||++|+.||+... ........
T Consensus 152 l~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~ 223 (276)
T 2h6d_A 152 IADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKI 223 (276)
T ss_dssp ECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH
T ss_pred EeecccccccCCCcce---ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHh
Confidence 9999999876543222 12348999999999988765 689999999999999999999986321 11111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. ...... +...+.++.+++.+||+.||++|||++|+++.
T Consensus 224 ~---------~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 224 R---------GGVFYI-------------------PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp H---------HCCCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h---------cCcccC-------------------chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 000000 00123458899999999999999999999874
No 236
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.5e-38 Score=347.20 Aligned_cols=263 Identities=24% Similarity=0.330 Sum_probs=196.2
Q ss_pred hCCCCccceecccCceeEEEEEeCC-CC--eEEEEEEeecc---CchhHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDE-GK--TIVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
.++|++.+.||+|+||+||+|++.. ++ ..||||+++.. .....+++.+|++++++++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 4579999999999999999998643 23 36899998743 23455788999999999999999999998532
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
+ ..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 93 -~-~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 93 -P-PMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRD 158 (291)
T ss_dssp -S-SCEEEEECCTTCBHHHHHHH---------HGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred -C-CceeeEecccCCCHHHHHHh---------ccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCC
Confidence 2 37899999999999999953 335689999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCccc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHH
Q 042075 864 IAHVGDFGLATFLPLSHAQT-SSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNF 941 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~ 941 (1033)
.+||+|||++.......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~ 233 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQI 233 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHH
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHH
Confidence 99999999998775443221 1222347889999999988889999999999999999999 9999863211 111
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILL 1021 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 1021 (1033)
......... +...+..+++++.+++.+||+.||++|||+.++++.|+++.....
T Consensus 234 ~~~~~~~~~--------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 234 LHKIDKEGE--------------------------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp HHHHHTSCC--------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred HHHHHccCC--------------------------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 111100000 000011234568999999999999999999999999998865443
No 237
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=343.91 Aligned_cols=253 Identities=25% Similarity=0.301 Sum_probs=198.3
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|.+..+++.||+|+++... ..+.+.+|+.++++++||||+++++++. ..+..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEE
Confidence 4568999999999999999999999899999999997543 3467899999999999999999999953 34578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 167 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRL---------RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLA 167 (314)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEeecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEe
Confidence 999999999999999852 345689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCCc
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALPD 948 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 948 (1033)
|||.+......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ...........
T Consensus 168 dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~ 243 (314)
T 3com_A 168 DFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPP 243 (314)
T ss_dssp CCTTCEECBTTBSC--BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCC
T ss_pred ecccchhhhhhccc--cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCc
Confidence 99999876443222 122348999999999999999999999999999999999999986321110 00000000000
Q ss_pred chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 949 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 949 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
. . ..+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~--------~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 244 T--------F--------------------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp C--------C--------------------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred c--------c--------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 0 0011123568999999999999999999999873
No 238
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.5e-38 Score=347.12 Aligned_cols=254 Identities=24% Similarity=0.299 Sum_probs=197.8
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..++|++.+.||+|+||.||+|++..+++.||+|++........+++.+|++++++++||||+++++++. .++..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY-----HDGKL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CC-CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-----eCCeE
Confidence 3468999999999999999999999899999999998666666788999999999999999999999953 44588
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 92 ~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 159 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLE---------LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLA 159 (302)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEE
Confidence 999999999999999853 345689999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCcccccccccccccccccccc-----CCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYG-----LGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
|||++....... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||....... .......
T Consensus 160 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 236 (302)
T 2j7t_A 160 DFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAK 236 (302)
T ss_dssp CCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred ECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhc
Confidence 999875421111 111123489999999987 46678999999999999999999999986321110 0111110
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
...+. . ..+...+.++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~---------~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 237 SDPPT---------L--------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SCCCC---------C--------------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCCcc---------c--------------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000 0 001122456899999999999999999999986
No 239
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.2e-38 Score=358.74 Aligned_cols=200 Identities=26% Similarity=0.347 Sum_probs=173.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.++|++.+.||+|+||+||+|++..+++.||+|+++.. .....+.+.+|+.++++++||||+++++++. .++..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-----ETTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-----ECCEE
Confidence 35799999999999999999999999999999999754 3344577899999999999999999999953 45578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEe
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVG 868 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~ 868 (1033)
++||||+++++|.++++. ...+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+
T Consensus 107 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~ 174 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKK----------AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLC 174 (360)
T ss_dssp EEEECCCTTCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEECCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEE
Confidence 999999999999999952 346899999999999999999999831 89999999999999999999999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCc
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDI 930 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~ 930 (1033)
|||++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 175 Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 175 DFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred ECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999987542211 1223489999999999999999999999999999999999999964
No 240
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-37 Score=340.38 Aligned_cols=248 Identities=19% Similarity=0.274 Sum_probs=197.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.+.||+|+||+||+|++..+++.||+|+++.. ......++.+|+..+.++ +||||+++++++ ..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~~~ 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AEDD 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EETT
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCC
Confidence 46799999999999999999999989999999998753 233456788999999999 999999999995 3455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC----
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE---- 862 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~---- 862 (1033)
..++||||+++++|.+++... ......+++.++..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISEN------YRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------
T ss_pred eEEEEEEecCCCcHHHHHHhh------cccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCc
Confidence 889999999999999999531 11225689999999999999999999999 99999999999999844
Q ss_pred ---------------CcEEEeecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCC
Q 042075 863 ---------------MIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKK 926 (1033)
Q Consensus 863 ---------------~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~ 926 (1033)
..+||+|||.+........ ..||+.|+|||++.+. .+++++|||||||++|||++|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSCC------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCceEEEEcccccccccCCccc------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 4799999999987654322 2389999999998775 56789999999999999999998
Q ss_pred CCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 042075 927 PTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM 1006 (1033)
Q Consensus 927 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 1006 (1033)
|+.. ............+ .. +..+++++.+++.+||+.||++|||+
T Consensus 230 ~~~~----~~~~~~~~~~~~~---------~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 274 (289)
T 1x8b_A 230 LPRN----GDQWHEIRQGRLP---------RI----------------------PQVLSQEFTELLKVMIHPDPERRPSA 274 (289)
T ss_dssp CCSS----SHHHHHHHTTCCC---------CC----------------------SSCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCcc----hhHHHHHHcCCCC---------CC----------------------CcccCHHHHHHHHHHhCCCcccCCCH
Confidence 7632 1111111111110 00 00123568999999999999999999
Q ss_pred HHHHHH
Q 042075 1007 TNVVHQ 1012 (1033)
Q Consensus 1007 ~evl~~ 1012 (1033)
.|+++.
T Consensus 275 ~~ll~h 280 (289)
T 1x8b_A 275 MALVKH 280 (289)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999763
No 241
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.3e-37 Score=367.49 Aligned_cols=253 Identities=21% Similarity=0.279 Sum_probs=199.4
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc-------------hhHHHHHHHHHHHHhcCCCCceeEee
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH-------------GAFKSFIAECNTLKNIRHRNLVKILT 775 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 775 (1033)
..++|++.++||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999999999999999999874321 23467889999999999999999999
Q ss_pred eeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCC
Q 042075 776 ACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPS 855 (1033)
Q Consensus 776 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~ 855 (1033)
+| ..+...++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+
T Consensus 114 ~~-----~~~~~~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~ 175 (504)
T 3q5i_A 114 VF-----EDKKYFYLVTEFYEGGELFEQII----------NRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPE 175 (504)
T ss_dssp EE-----ECSSEEEEEEECCTTCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred EE-----EcCCEEEEEEecCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHH
Confidence 95 45568999999999999999984 335689999999999999999999999 9999999999
Q ss_pred CeEecCCC---cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccc
Q 042075 856 NVLLDEEM---IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMF 932 (1033)
Q Consensus 856 NIll~~~~---~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~ 932 (1033)
||+++.++ .+||+|||+++......... ...||+.|+|||++. ..++.++||||+||++|+|++|+.||....
T Consensus 176 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 176 NILLENKNSLLNIKIVDFGLSSFFSKDYKLR---DRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp GEEESSTTCCSSEEECCCTTCEECCTTSCBC---CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEEecCCCCccEEEEECCCCEEcCCCCccc---cccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99998776 69999999998775443222 234999999999976 469999999999999999999999986321
Q ss_pred cCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 933 EGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. ..+.......... .. ......++++.+++.+||+.||++|||++|+++.
T Consensus 252 ~~-~~~~~i~~~~~~~------------~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 252 DQ-DIIKKVEKGKYYF------------DF----------------NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HH-HHHHHHHHCCCCC------------CH----------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH-HHHHHHHcCCCCC------------Cc----------------cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11 0011100000000 00 0001234568999999999999999999999865
No 242
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.8e-38 Score=370.61 Aligned_cols=252 Identities=24% Similarity=0.291 Sum_probs=202.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
.++|++.++||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++ ...+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----EDKG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 357999999999999999999999999999999986432 33457889999999999999999999995 4556
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---cCCC
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL---DEEM 863 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~ 863 (1033)
..++||||+.+|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||++ +.++
T Consensus 100 ~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 166 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEII----------SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDA 166 (484)
T ss_dssp EEEEEECCCCSCBHHHHHH----------TCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTC
T ss_pred EEEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCC
Confidence 8999999999999999984 335689999999999999999999999 99999999999999 5678
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
.+||+|||+++......... ...||+.|+|||++.+ .++.++||||+||++|||++|++||...... ..+.....
T Consensus 167 ~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~ 241 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEK 241 (484)
T ss_dssp CEEECCTTHHHHBCCCCSHH---HHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred cEEEEeeeeeEEcccccccc---cCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHc
Confidence 99999999998765443322 2349999999999876 6999999999999999999999998632111 00111111
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....... +.....++++.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~----------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 242 GKYTFEL----------------------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CCCCCCS----------------------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCCC----------------------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0000000 0001234568999999999999999999999874
No 243
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.8e-37 Score=341.46 Aligned_cols=277 Identities=26% Similarity=0.326 Sum_probs=199.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++. .++.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK 76 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-----cCCc
Confidence 368999999999999999999999899999999986432 223467889999999999999999999953 4457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||++ ++|.+++.. .....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||
T Consensus 77 ~~lv~e~~~-~~L~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl 144 (299)
T 2r3i_A 77 LYLVFEFLH-QDLKKFMDA--------SALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKL 144 (299)
T ss_dssp EEEEEECCS-EEHHHHHHH--------TTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred eEEEEEccc-CCHHHHHHh--------hhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEE
Confidence 899999997 699999854 2234588999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCC-CCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSE-VSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||.+.......... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||......+ ..........
T Consensus 145 ~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 221 (299)
T 2r3i_A 145 ADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLG 221 (299)
T ss_dssp CSTTHHHHHCCCSBCT--TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred CcchhhhhccCCcccc--CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhC
Confidence 9999998764332221 2234899999999988765 7999999999999999999999986432111 1111111110
Q ss_pred -Ccc-hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 947 -PDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 947 -~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
+.. ........ .......... ..... .......++++.+++.+||+.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 222 TPDEVVWPGVTSM-PDYKPSFPKW--ARQDF--SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCTTTSTTGGGS-TTCCTTSCCC--CCCCH--HHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhhhhHhhcC-cccchhhhcc--cchhh--HhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 100 00000000 0000000000 00000 0000123456899999999999999999999986
No 244
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.6e-37 Score=338.29 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=201.1
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---------chhHHHHHHHHHHHHhcC-CCCceeEeeeec
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---------HGAFKSFIAECNTLKNIR-HRNLVKILTACS 778 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 778 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~- 93 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY- 93 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE-
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee-
Confidence 4578999999999999999999999999999999997543 122456789999999995 99999999995
Q ss_pred cccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeE
Q 042075 779 GVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVL 858 (1033)
Q Consensus 779 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (1033)
..++..++||||+++++|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+
T Consensus 94 ----~~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil 156 (298)
T 1phk_A 94 ----ETNTFFFLVFDLMKKGELFDYLT----------EKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENIL 156 (298)
T ss_dssp ----ECSSEEEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred ----ccCCeEEEEEeccCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence 44568999999999999999994 235689999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeecccceecCCCCccccccccccccccccccccC------CCCCCcccchHHHHHHHHHHHhCCCCCCccc
Q 042075 859 LDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL------GSEVSINGDVYSYGILLLELVTRKKPTDIMF 932 (1033)
Q Consensus 859 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~vl~elltg~~p~~~~~ 932 (1033)
++.++.+||+|||.+.......... ...|++.|+|||++. ...++.++||||||+++|||++|+.||....
T Consensus 157 ~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 157 LDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp ECTTCCEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EcCCCcEEEecccchhhcCCCcccc---cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 9999999999999998765433222 234899999999874 4568899999999999999999999985321
Q ss_pred cCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 933 EGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
. .............. .. +.....+.++.+++.+||+.||++|||+.|+++
T Consensus 234 ~--~~~~~~~~~~~~~~-----------~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 234 Q--MLMLRMIMSGNYQF-----------GS----------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp H--HHHHHHHHHTCCCC-----------CT----------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred H--HHHHHHHhcCCccc-----------Cc----------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1 01111000000000 00 000123456899999999999999999999876
No 245
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.9e-37 Score=364.55 Aligned_cols=252 Identities=21% Similarity=0.256 Sum_probs=196.4
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++++++||||++++++| .....
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 346999999999999999999999999999999987532 23357789999999999999999999995 44568
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC---CCc
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE---EMI 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 864 (1033)
.++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ ||+||||||+||+++. ++.
T Consensus 111 ~~lv~e~~~~g~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 177 (494)
T 3lij_A 111 YYLVMECYKGGELFDEII----------HRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDAL 177 (494)
T ss_dssp EEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCc
Confidence 899999999999999884 335689999999999999999999999 9999999999999975 456
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||+++........ ....||+.|+|||++. ..++.++||||+||++|+|++|+.||...... ..+......
T Consensus 178 ~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~ 252 (494)
T 3lij_A 178 IKIVDFGLSAVFENQKKM---KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKG 252 (494)
T ss_dssp EEECCCTTCEECBTTBCB---CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred EEEEECCCCeECCCCccc---cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC
Confidence 999999999876543322 2245999999999976 56999999999999999999999998632111 001111110
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... .+ .....++++.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~-----~~-----------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 253 KYTFD-----SP-----------------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CCCCC-----SG-----------------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCCCC-----ch-----------------------hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 00000 00 001123568899999999999999999999875
No 246
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-37 Score=352.50 Aligned_cols=281 Identities=20% Similarity=0.174 Sum_probs=198.4
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeeecccccc-CC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ-GN 785 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~~ 785 (1033)
..++|.+.+.||+|+||.||+|.+..+++.||||+++.. .....+++.+|+.++++++||||+++++++...... ..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 457899999999999999999999999999999999753 233457788999999999999999999997543211 11
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
...++||||+. ++|.+++. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~ 183 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG------------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCEL 183 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred eeEEEEEcccc-ccHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCE
Confidence 13499999996 68888873 2389999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
||+|||+++...... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+......
T Consensus 184 kL~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 257 (371)
T 4exu_A 184 KILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKV 257 (371)
T ss_dssp EECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred EEEecCcccccccCc-----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 999999998654322 22348999999999887 689999999999999999999999996422111 11111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.-.. ..+.................................+++.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 258 TGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HCCC-CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hCCC-cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 1000 000000000000000000000000000000111235678999999999999999999999875
No 247
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2e-37 Score=375.32 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=197.7
Q ss_pred ceecccCceeEEEEEe--CCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCceeEEE
Q 042075 717 NLIGAGSFGSVYKGIL--DEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 792 (1033)
Q Consensus 717 ~~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 792 (1033)
+.||+|+||+||+|.+ ..+++.||||+++... ....+++.+|++++++++||||++++++|. .+..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 4799999999999965 4567899999997533 234578999999999999999999999863 23578999
Q ss_pred EcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeeccc
Q 042075 793 EFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGL 872 (1033)
Q Consensus 793 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~ 872 (1033)
||+++|+|.++++ ....+++.++..|+.||+.||+|||++ +|+||||||+||++++++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~----------~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQ----------QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHH----------HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHh----------hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 9999999999994 335689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCcc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHHhhhCCcch
Q 042075 873 ATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFAKTALPDHV 950 (1033)
Q Consensus 873 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 950 (1033)
|+........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..........
T Consensus 516 a~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~---- 589 (635)
T 4fl3_A 516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGE---- 589 (635)
T ss_dssp HHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC----
T ss_pred ccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC----
Confidence 9876543321 12222346789999999998899999999999999999998 99998632111 1111111100
Q ss_pred hhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 951 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 951 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
+...+..+++++.+++.+||+.||++|||+++|++.|+++-..
T Consensus 590 --------------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 590 --------------------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp --------------------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --------------------------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 0001112456789999999999999999999999999987543
No 248
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.6e-37 Score=341.69 Aligned_cols=257 Identities=20% Similarity=0.266 Sum_probs=186.6
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--hhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.++...++.++||||+++++++. .++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~ 79 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REG 79 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccC
Confidence 35689999999999999999999998999999999975422 22233445555678889999999999953 455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||++ |+|.+++... ......+++.++..++.|++.||+|||+++ ||+||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~k 150 (290)
T 3fme_A 80 DVWICMELMD-TSLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVK 150 (290)
T ss_dssp SEEEEEECCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEE
T ss_pred CEEEEEehhc-cchHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEE
Confidence 7899999997 5888887431 123467999999999999999999999842 899999999999999999999
Q ss_pred EeecccceecCCCCcccccccccccccccccccc----CCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYG----LGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~ 942 (1033)
|+|||+++......... ...||+.|+|||++ .+..++.++||||+||++|||++|+.||+.............
T Consensus 151 l~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 227 (290)
T 3fme_A 151 MCDFGISGYLVDDVAKD---IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227 (290)
T ss_dssp BCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred EeecCCccccccccccc---ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh
Confidence 99999998764433222 23489999999996 556789999999999999999999999863221111111111
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....+.. . ....++++.+++.+||+.||++|||+.|+++.
T Consensus 228 ~~~~~~~------------~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 228 EEPSPQL------------P------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HSCCCCC------------C------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccCCCCc------------c------------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1110000 0 00123568999999999999999999999883
No 249
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4e-37 Score=356.90 Aligned_cols=199 Identities=26% Similarity=0.324 Sum_probs=170.8
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc------CCCCceeEeeeecccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI------RHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 783 (1033)
..+|++.+.||+|+||+||+|.+..+++.||||+++... ...+.+.+|+++++.+ +|+||+++++++.
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~----- 169 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT----- 169 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-----
Confidence 467999999999999999999999999999999997532 3346677888888887 5779999999953
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
..+..++||||+. ++|.+++.. .....+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKK--------NKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQG 237 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTT
T ss_pred cCCeEEEEEeccC-CCHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCC
Confidence 4458899999995 699999854 2334589999999999999999999999 999999999999999988
Q ss_pred c--EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCcc
Q 042075 864 I--AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIM 931 (1033)
Q Consensus 864 ~--~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~ 931 (1033)
. +||+|||+|+....... ...||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 238 ~~~vkL~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQRVY-----TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcceEEeecccceecCCccc-----ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 7 99999999986543221 234899999999999999999999999999999999999998643
No 250
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.8e-38 Score=357.35 Aligned_cols=266 Identities=9% Similarity=0.014 Sum_probs=184.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc---hhHHHHHHHHHHHHhc--CCCCceeEeeee-------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH---GAFKSFIAECNTLKNI--RHRNLVKILTAC------- 777 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~~~~------- 777 (1033)
..+|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.+++.+ +||||++++..+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3458899999999999999999998999999999986432 3346677886555555 699988865332
Q ss_pred ccccc------------cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHH------HHHHHHHHHHHHHH
Q 042075 778 SGVDY------------QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQR------LDIGIDVACALSYL 839 (1033)
Q Consensus 778 ~~~~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~------~~i~~qi~~~L~~L 839 (1033)
..... ......++||||++ |+|.++++. ....+.+..+ ..++.||+.||+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~---------~~~~~~~~~~~~~~vk~~i~~qi~~aL~~L 210 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST---------LDFVYVFRGDEGILALHILTAQLIRLAANL 210 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH---------HHHSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH---------hccccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 11100 00134799999998 899999964 1233455555 77889999999999
Q ss_pred HhCCCCCcEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCC--CCCCcccchHHHHHH
Q 042075 840 HHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG--SEVSINGDVYSYGIL 917 (1033)
Q Consensus 840 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~v 917 (1033)
|++ +|+||||||+|||++.++.+||+|||+|+....... ...+|+.|+|||++.+ ..++.++|||||||+
T Consensus 211 H~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~i 282 (371)
T 3q60_A 211 QSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-----ASSVPVTYAPREFLNASTATFTHALNAWQLGLS 282 (371)
T ss_dssp HHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-----GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHH
T ss_pred HHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-----CccCCcCCcChhhccCCCCCcCccccHHHHHHH
Confidence 999 999999999999999999999999999987643221 2337799999999987 679999999999999
Q ss_pred HHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccC
Q 042075 918 LLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSM 997 (1033)
Q Consensus 918 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 997 (1033)
+|||++|+.||......... .+.... ........ ........+++.+.+++.+||+
T Consensus 283 l~elltg~~Pf~~~~~~~~~--~~~~~~----~~~~~~~~------------------~~~~~~~~~~~~~~~li~~~L~ 338 (371)
T 3q60_A 283 IYRVWCLFLPFGLVTPGIKG--SWKRPS----LRVPGTDS------------------LAFGSCTPLPDFVKTLIGRFLN 338 (371)
T ss_dssp HHHHHHSSCSTTBCCTTCTT--CCCBCC----TTSCCCCS------------------CCCTTSSCCCHHHHHHHHHHTC
T ss_pred HHHHHhCCCCCCCcCccccc--chhhhh----hhhccccc------------------cchhhccCCCHHHHHHHHHHcC
Confidence 99999999999743221100 000000 00000000 0000001234568999999999
Q ss_pred CCCCCCCCHHHHHHH--HHHHH
Q 042075 998 ESPEDRMDMTNVVHQ--LQSIK 1017 (1033)
Q Consensus 998 ~dP~~RPt~~evl~~--L~~i~ 1017 (1033)
.||++|||+.|+++. ++++.
T Consensus 339 ~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 339 FDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp SSTTTCCCHHHHTTSHHHHHHH
T ss_pred CChhhCCCHHHHhcCHHHHHHH
Confidence 999999999999863 44443
No 251
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.8e-38 Score=347.66 Aligned_cols=270 Identities=22% Similarity=0.310 Sum_probs=184.9
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+++.+|+.++++++||||+++++++. ..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 87 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-----VKDE 87 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE-----SSSC
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-----ecCC
Confidence 4578999999999999999999998889999999986432 234567889999999999999999999953 4457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++++|.+++....... ......+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKG--EHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTT--TTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cEEEehhccCCchHHHHHHHhhcc--ccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 899999999999999985321110 11345689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCcc---ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 868 GDFGLATFLPLSHAQ---TSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
+|||.+......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~ 241 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQ 241 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHT
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHHhc
Confidence 999999765433211 11122348999999999866 5689999999999999999999999864322111 100000
Q ss_pred hhCCcchh-hhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVV-DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....... ...+... ....++++.+++.+||+.||++|||+.|+++.
T Consensus 242 -~~~~~~~~~~~~~~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 242 -NDPPSLETGVQDKEM----------------------LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -SSCCCTTC-----CC----------------------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -cCCCccccccccchh----------------------hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000000 0000000 00123468999999999999999999999873
No 252
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.1e-37 Score=349.79 Aligned_cols=292 Identities=18% Similarity=0.175 Sum_probs=195.5
Q ss_pred HHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-
Q 042075 704 QNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY- 782 (1033)
Q Consensus 704 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 782 (1033)
.......++|++.+.||+|+||+||+|++..+++.||||++.... ....+..+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 456677889999999999999999999999899999999886432 233566788888999999999999999754332
Q ss_pred -cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHH--hCCCCCcEeccCCCCCeEe
Q 042075 783 -QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLH--HDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 783 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~ivHrDlkp~NIll 859 (1033)
......++||||+++ +|.+.+... ......+++..+..++.|++.|++||| +. +|+||||||+||++
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll 164 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNY------YRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLV 164 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHH------HTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHH------hhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEE
Confidence 122247899999976 554444210 124456889999999999999999999 77 99999999999999
Q ss_pred cC-CCcEEEeecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 042075 860 DE-EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN 937 (1033)
Q Consensus 860 ~~-~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~ 937 (1033)
+. ++.+||+|||+++......... ...||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..
T Consensus 165 ~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~ 240 (360)
T 3e3p_A 165 NEADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQ 240 (360)
T ss_dssp ETTTTEEEECCCTTCBCCCTTSCCC---STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH
T ss_pred eCCCCcEEEeeCCCceecCCCCCcc---cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HH
Confidence 96 8999999999998765443322 23489999999998665 4899999999999999999999998643211 11
Q ss_pred HHHHHhhhCCc--chhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 938 LHNFAKTALPD--HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 938 ~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
+....+..... .....+++..... +........-............+++.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 241 LHEIVRVLGCPSREVLRKLNPSHTDV--DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHCCCCHHHHHHHCTTCCCG--GGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcCCCCHHHHHhcccchhhc--cccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11221111111 1111111110000 0000000000000011111245679999999999999999999999875
No 253
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=344.02 Aligned_cols=285 Identities=18% Similarity=0.216 Sum_probs=198.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeecccc--------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-------- 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 781 (1033)
.++|++.+.||+|+||.||+|++..+++.||+|++........+++.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999999899999999998766666788999999999999999999999864321
Q ss_pred -ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec
Q 042075 782 -YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD 860 (1033)
Q Consensus 782 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~ 860 (1033)
.......++||||++ |+|.+++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----------GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----------CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc
Confidence 134467899999997 699999842 4588999999999999999999999 999999999999997
Q ss_pred -CCCcEEEeecccceecCCCCcc-ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 042075 861 -EEMIAHVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN 937 (1033)
Q Consensus 861 -~~~~~kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~ 937 (1033)
+++.+||+|||.++........ .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......+ .
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 233 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-Q 233 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 5679999999999876432211 11122347899999998765 678999999999999999999999986432111 1
Q ss_pred HHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 938 LHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 938 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
..... ...+....+.................. .............++++.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 234 MQLIL-ESIPVVHEEDRQELLSVIPVYIRNDMT-EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHH-HHSCCCCHHHHHHHHTTSCHHHHHHTT-SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHH-HhcCCCchhhhhhhhhcCccccccccc-CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11111 111110000000000000000000000 00000000111245678999999999999999999999864
No 254
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-38 Score=353.29 Aligned_cols=256 Identities=22% Similarity=0.268 Sum_probs=198.7
Q ss_pred hCCCCccceecccCceeEEEEEeC---CCCeEEEEEEeeccC----chhHHHHHHHHHHHHhc-CCCCceeEeeeecccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILD---EGKTIVAVKVFNLLH----HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 781 (1033)
.++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~---- 128 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF---- 128 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE----
Confidence 457999999999999999999984 478999999986432 23345677899999999 699999999985
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
..++..++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 129 -~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 129 -QTETKLHLILDYINGGELFTHLSQ----------RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDS 194 (355)
T ss_dssp -EETTEEEEEECCCCSCBHHHHHHH----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -eeCceEEEEeecCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC
Confidence 345578999999999999999942 34689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCccccccccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHH
Q 042075 862 EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLH 939 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~ 939 (1033)
++.+||+|||+++......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...
T Consensus 195 ~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~ 272 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQA 272 (355)
T ss_dssp TSCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHH
T ss_pred CCcEEEeeCCCCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHH
Confidence 9999999999998764332222 223459999999999886 357899999999999999999999996432211 111
Q ss_pred HHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 042075 940 NFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-----DMTNVVHQL 1013 (1033)
Q Consensus 940 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~L 1013 (1033)
......... ....+.+.+..+.+++.+||+.||++|| +++|+++..
T Consensus 273 ~~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 273 EISRRILKS----------------------------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHHHHHC----------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHHHHhcc----------------------------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 111110000 0000112235588999999999999999 899998753
No 255
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-36 Score=348.57 Aligned_cols=349 Identities=19% Similarity=0.209 Sum_probs=248.9
Q ss_pred CCCCCCCCCCcc-eeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEec
Q 042075 61 FGSWNESIHFCQ-WHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLAL 139 (1033)
Q Consensus 61 ~~~W~~~~~~c~-w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 139 (1033)
+++|....+||. |.+..|.... .+| ............-..+++++.|++++|.++...+..|..+++|++|+|
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~-~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYD-VHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76 (390)
T ss_dssp ----CCEECBCC------EEEES-CEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEEC
T ss_pred cCCCCCccceehhhhhhccceee-eee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEEC
Confidence 678988778885 4444443210 111 221222222223345789999999999998544455789999999999
Q ss_pred ccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCc
Q 042075 140 HNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGS 219 (1033)
Q Consensus 140 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 219 (1033)
++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++.
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 156 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 156 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc
Confidence 99999977778999999999999999999988888899999999999999999965556679999999999999999988
Q ss_pred CCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcC
Q 042075 220 IPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISN 299 (1033)
Q Consensus 220 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 299 (1033)
.|+.|..+++|++|++++|++++. .+..+++|+.|++++|.+++. + ...+|++|++++|+++.. |.. .
T Consensus 157 ~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-~-----~~~~L~~L~l~~n~l~~~-~~~--~ 224 (390)
T 3o6n_A 157 EDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-A-----IPIAVEELDASHNSINVV-RGP--V 224 (390)
T ss_dssp CTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-E-----CCSSCSEEECCSSCCCEE-ECC--C
T ss_pred ChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-C-----CCCcceEEECCCCeeeec-ccc--c
Confidence 888999999999999999999854 355667788888888877632 1 234677777777776643 222 1
Q ss_pred CCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccC
Q 042075 300 ASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFST 379 (1033)
Q Consensus 300 l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~ 379 (1033)
.++|+.|++++|++++. +.+.. .+
T Consensus 225 ~~~L~~L~l~~n~l~~~-~~l~~-------------------------------------------------------l~ 248 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT-AWLLN-------------------------------------------------------YP 248 (390)
T ss_dssp CSSCCEEECCSSCCCCC-GGGGG-------------------------------------------------------CT
T ss_pred cccccEEECCCCCCccc-HHHcC-------------------------------------------------------CC
Confidence 34566666666655532 11111 14
Q ss_pred cccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeecc
Q 042075 380 TLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLS 458 (1033)
Q Consensus 380 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls 458 (1033)
+|+.|++++|.+++..|..|.++++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..++ |++|+|+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~ 326 (390)
T 3o6n_A 249 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 326 (390)
T ss_dssp TCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECC
Confidence 56677777777777777777777788888888887774 4556667777888888888777 4566666665 7777777
Q ss_pred ccccCCCCCCccCCCCcccEEecCCCccCC
Q 042075 459 YNFLQGSIPSSLGQSETLTIIDLSNNNLTG 488 (1033)
Q Consensus 459 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 488 (1033)
+|.+++. | +..+++|+.|++++|.+++
T Consensus 327 ~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 327 HNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp SSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCcccee-C--chhhccCCEEEcCCCCccc
Confidence 7777643 3 5667788888888888763
No 256
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.9e-37 Score=354.18 Aligned_cols=284 Identities=20% Similarity=0.249 Sum_probs=204.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC--------CCCceeEeeeecccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR--------HRNLVKILTACSGVD 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~ 781 (1033)
.++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999999989999999999743 334577889999999995 788999999864321
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
......++||||+ ++++.+++.. .....+++.++..++.||+.||+|||+++ ||+||||||+|||++.
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~ 182 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIK--------SNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSV 182 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECC
T ss_pred -CCCceEEEEEecc-CccHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEec
Confidence 2445789999999 5666666642 23356899999999999999999999853 8999999999999997
Q ss_pred CC-------------------------------------------------cEEEeecccceecCCCCcccccccccccc
Q 042075 862 EM-------------------------------------------------IAHVGDFGLATFLPLSHAQTSSIFAKGSI 892 (1033)
Q Consensus 862 ~~-------------------------------------------------~~kL~DfG~a~~~~~~~~~~~~~~~~gt~ 892 (1033)
++ .+||+|||.++...... ....||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----~~~~gt~ 257 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----TEDIQTR 257 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----CSCCSCG
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----ccCCCCC
Confidence 75 79999999998764322 2234899
Q ss_pred ccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCcc-----HHHHHhh--hCCcch-------hhhccccc
Q 042075 893 GYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMN-----LHNFAKT--ALPDHV-------VDIVDSTL 958 (1033)
Q Consensus 893 ~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~-----~~~~~~~--~~~~~~-------~~~~d~~l 958 (1033)
.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....... ..+... .+......
T Consensus 258 ~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 337 (397)
T 1wak_A 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKG 337 (397)
T ss_dssp GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTS
T ss_pred cccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcc
Confidence 999999999999999999999999999999999999743322111 1111100 000000 00000000
Q ss_pred C-CCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 959 L-SDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 959 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
. .....................+.+...++.+++.+||+.||++|||++|+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 338 DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 0000000000000111122234566788999999999999999999999986
No 257
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=359.93 Aligned_cols=151 Identities=23% Similarity=0.168 Sum_probs=75.7
Q ss_pred ccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCC
Q 042075 386 LDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGS 465 (1033)
Q Consensus 386 L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~ 465 (1033)
+++|.+.+..+..|..+++|++|++++|.+.+.+|..+....+|+.|+|++|+++ +.
T Consensus 183 l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-----------------------~~ 239 (477)
T 2id5_A 183 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-----------------------AV 239 (477)
T ss_dssp EESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-----------------------SC
T ss_pred CCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-----------------------cc
Confidence 3333333344445556666777777776666555555555556666666666555 22
Q ss_pred CCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCccccc
Q 042075 466 IPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGS 545 (1033)
Q Consensus 466 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 545 (1033)
.+..|..+++|++|+|++|++++..+..+..+.++ +.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 318 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRL-QEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHS 318 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTC-CEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSC
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccC-CEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCC
Confidence 23345556666666666666553222222222222 33333333333333444445555555555555555444444555
Q ss_pred ccccceeeccccccc
Q 042075 546 CIKLELLQMQGNFLQ 560 (1033)
Q Consensus 546 l~~L~~L~Ls~N~l~ 560 (1033)
+++|++|+|++|+++
T Consensus 319 l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 319 VGNLETLILDSNPLA 333 (477)
T ss_dssp GGGCCEEECCSSCEE
T ss_pred CcccCEEEccCCCcc
Confidence 555555555555554
No 258
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.8e-37 Score=348.13 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=197.6
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHHH-HHhcCCCCceeEeeeeccccccCC
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECNT-LKNIRHRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~ 785 (1033)
...++|++.+.||+|+||.||+|++..+++.||||+++... .....++..|..+ ++.++||||+++++++. .+
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~-----~~ 122 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----RE 122 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEE-----CS
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEE-----eC
Confidence 34568999999999999999999998899999999997542 2334555666665 77789999999999953 44
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcE
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
+..++||||+++ +|.+++... ......+++..+..++.||+.||+|||++. ||+||||||+||+++.++.+
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~ 193 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQV 193 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHH------HHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCE
T ss_pred CcEEEEHHHhhC-cHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCE
Confidence 578999999975 999988531 123467899999999999999999999732 89999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccC----CCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHH
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL----GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNF 941 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~ 941 (1033)
||+|||+++....... .....||+.|+|||++. ...++.++|||||||++|||++|+.||+........+...
T Consensus 194 kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~ 270 (340)
T 3an0_A 194 KMCDFGISGYLVDSVA---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270 (340)
T ss_dssp EECCCSHHHHHSCHHH---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred EEeeCCCceecccccc---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHH
Confidence 9999999986643221 12234899999999964 3478999999999999999999999986321111111111
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.....+. .. ...+++++.+++.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~------------~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 271 VEEPSPQ------------LP------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHSCCCC------------CC------------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hcCCCCC------------CC------------------cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1100000 00 00124568999999999999999999999874
No 259
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.9e-37 Score=373.91 Aligned_cols=250 Identities=19% Similarity=0.239 Sum_probs=202.1
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc---CchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 784 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 784 (1033)
..++|++.++||+|+||.||+|++..+++.||||+++.. .....+.+..|..++..+ +||+|++++++ ++.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence 356899999999999999999999999999999999743 233456788899999988 79999999998 556
Q ss_pred CCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc
Q 042075 785 NDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI 864 (1033)
Q Consensus 785 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~ 864 (1033)
.+..|+||||+++|+|.++++. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+++
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQ----------VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH----------HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSC
T ss_pred CCEEEEEEeCcCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCc
Confidence 6689999999999999999952 34689999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||+|+........ .....||+.|+|||++.+..|+.++|||||||++|||++|+.||.... .......
T Consensus 481 ikL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-----~~~~~~~ 553 (674)
T 3pfq_A 481 IKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQS 553 (674)
T ss_dssp EEECCCTTCEECCCTTCC--BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH
T ss_pred EEEeecceeeccccCCcc--cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-----HHHHHHH
Confidence 999999999864333222 223459999999999999999999999999999999999999996321 1111111
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDM-----TNVVH 1011 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 1011 (1033)
..... . .. +....+++.+++.+||+.||++||++ +||++
T Consensus 554 i~~~~--------~-~~-------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 554 IMEHN--------V-AY-------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHSSC--------C-CC-------------------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHhCC--------C-CC-------------------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11100 0 00 01124568999999999999999997 55554
No 260
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.2e-37 Score=344.13 Aligned_cols=278 Identities=20% Similarity=0.243 Sum_probs=202.0
Q ss_pred hCCCCccceecccCceeEEEEEe-CCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCC------ceeEeeeeccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGIL-DEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRN------LVKILTACSGVDY 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 782 (1033)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++... ...+.+.+|++++++++|++ ++++++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~----- 86 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF----- 86 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence 46899999999999999999998 5578999999987532 34567889999999987654 99999984
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC-
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE- 861 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~- 861 (1033)
...+..++||||+ +++|.+++.. .....+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKE--------NGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQS 154 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCC
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHh--------cCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecc
Confidence 4455899999999 8899999953 2234688999999999999999999999 9999999999999987
Q ss_pred ------------------CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh
Q 042075 862 ------------------EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT 923 (1033)
Q Consensus 862 ------------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt 923 (1033)
++.+||+|||.++...... ....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 6689999999998754322 12348999999999999999999999999999999999
Q ss_pred CCCCCCccccCCccHHHHHhhh---CCcchhhhccc---------ccCCCchhhh-hccchhhhhhhhhhHHHHHHHHHH
Q 042075 924 RKKPTDIMFEGDMNLHNFAKTA---LPDHVVDIVDS---------TLLSDDEDLA-VHGNQRQRQARINSKIECLVAMAR 990 (1033)
Q Consensus 924 g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~---------~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 990 (1033)
|+.||...... ......... .+......... .......... .................+++++.+
T Consensus 230 g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (339)
T 1z57_A 230 GFTVFPTHDSK--EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFD 307 (339)
T ss_dssp SSCSCCCSCHH--HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHH
T ss_pred CCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHH
Confidence 99999643211 111111111 11111000000 0000000000 000000000111122345678999
Q ss_pred HHhhccCCCCCCCCCHHHHHHH
Q 042075 991 IGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 991 l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
++.+||+.||++|||++|+++.
T Consensus 308 li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 308 LIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHhCcCcccccCHHHHhcC
Confidence 9999999999999999999764
No 261
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.2e-36 Score=340.87 Aligned_cols=283 Identities=22% Similarity=0.287 Sum_probs=203.3
Q ss_pred HhhCCCCccceecccCceeEEEEEeC-CCCeEEEEEEeeccCc--hhHHHHHHHHHHHHhc---CCCCceeEeeeecccc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILD-EGKTIVAVKVFNLLHH--GAFKSFIAECNTLKNI---RHRNLVKILTACSGVD 781 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~ 781 (1033)
.+.++|++.+.||+|+||.||+|++. .+++.||+|+++.... .....+.+|+.+++++ +||||++++++|....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45678999999999999999999994 6789999999874322 2234566788877776 8999999999975433
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
.......++||||++ |+|.+++.. .....+++.++..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~ 155 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDK--------VPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTS 155 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHH--------SCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred cCCCceEEEEEecCC-CCHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcC
Confidence 335567899999997 699999854 2234589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHH
Q 042075 862 EMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNF 941 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~ 941 (1033)
++.+||+|||.++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+...
T Consensus 156 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i 231 (326)
T 1blx_A 156 SGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKI 231 (326)
T ss_dssp TCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred CCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHH
Confidence 9999999999998654322 1222448999999999999999999999999999999999999986432111 11111
Q ss_pred HhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 942 AKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 942 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
..........++... ........ ..... ..........++.+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 232 LDVIGLPGEEDWPRD-VALPRQAF--HSKSA--QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHCCCCGGGSCTT-CSSCGGGS--CCCCC--CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCcccCccc-cccchhhh--cccCc--chhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111100000000000 00000000 00000 0000011123456899999999999999999999985
No 262
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.2e-37 Score=355.94 Aligned_cols=278 Identities=20% Similarity=0.211 Sum_probs=197.2
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-cCCCcee
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGNDFKA 789 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 789 (1033)
.+|++.+.||+|+||.||+|++..+++.||||++..... ...+|++++++++||||++++++|..... ....+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 468899999999999999999998999999999864322 23479999999999999999998754321 2233467
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC-CcEEEe
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE-MIAHVG 868 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kL~ 868 (1033)
+||||+++ ++.+.+... ......+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+
T Consensus 130 lv~e~~~~-~l~~~~~~~------~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~ 199 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHY------SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLC 199 (420)
T ss_dssp EEEECCCE-EHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred eehhcccc-cHHHHHHHH------hhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEec
Confidence 99999975 676665321 12346789999999999999999999999 99999999999999965 578999
Q ss_pred ecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 869 DFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 869 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
|||+++......... ...||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+....+..-.
T Consensus 200 DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~ 275 (420)
T 1j1b_A 200 DFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGT 275 (420)
T ss_dssp CCTTCEECCTTCCCC---SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCS
T ss_pred cchhhhhcccCCCce---eeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 999998765433222 23489999999998765 7999999999999999999999998642211 111222211111
Q ss_pred cc---hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 948 DH---VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 948 ~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.. +... ++...... ... .....+.. ......++++.+++.+||+.||++|||+.|+++.
T Consensus 276 p~~~~~~~~-~~~~~~~~--~p~-~~~~~~~~--~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 276 PTREQIREM-NPNYTEFK--FPQ-IKAHPWTK--VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCHHHHHHH-CSCCCCCC--CCC-CCCCCHHH--HSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHhh-Chhhhhhc--cCc-cCCCCHHH--hcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 10 1110 11000000 000 00000000 0011234568999999999999999999999864
No 263
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7e-37 Score=346.15 Aligned_cols=272 Identities=16% Similarity=0.204 Sum_probs=201.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchh-----------------HHHHHHHHHHHHhcCCCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGA-----------------FKSFIAECNTLKNIRHRNLVK 772 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 772 (1033)
.++|++.+.||+|+||.||+|++ +++.||||+++...... .+.+.+|+.++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 78999999987432111 178899999999999999999
Q ss_pred EeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCcEecc
Q 042075 773 ILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHH-DCQPPIVHCD 851 (1033)
Q Consensus 773 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivHrD 851 (1033)
+++++ ...+..++||||+++++|.+++...... .......+++..+..++.|++.||+|||+ . ||+|||
T Consensus 108 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~l--~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~d 177 (348)
T 2pml_X 108 CEGII-----TNYDEVYIIYEYMENDSILKFDEYFFVL--DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRD 177 (348)
T ss_dssp CSEEE-----ESSSEEEEEEECCTTCBSSEESSSEESS--CSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCC
T ss_pred EEEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhhh--hhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecC
Confidence 99995 3455899999999999999994211000 00225679999999999999999999999 8 999999
Q ss_pred CCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCC-CCCc-ccchHHHHHHHHHHHhCCCCCC
Q 042075 852 LKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSI-NGDVYSYGILLLELVTRKKPTD 929 (1033)
Q Consensus 852 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwSlG~vl~elltg~~p~~ 929 (1033)
|||+||+++.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++|||||||++|||++|+.||.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999876443 12224489999999999887 6666 9999999999999999999986
Q ss_pred ccccCCccHHHHHhhhC--CcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 930 IMFEGDMNLHNFAKTAL--PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 930 ~~~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
................. +........+.. ...........+.++.+++.+||+.||++|||++
T Consensus 254 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ 318 (348)
T 2pml_X 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPLT---------------NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318 (348)
T ss_dssp CSSCSHHHHHHHTSCCCCCCCSSSSSTTTTC---------------C--------CCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCcHHHHHHHHhccCcCCccchhhhhcccc---------------ccccccchhhcCHHHHHHHHHHccCChhhCCCHH
Confidence 43221111111111100 000000000000 0000001122346789999999999999999999
Q ss_pred HHHHH
Q 042075 1008 NVVHQ 1012 (1033)
Q Consensus 1008 evl~~ 1012 (1033)
|+++.
T Consensus 319 e~l~h 323 (348)
T 2pml_X 319 DALKH 323 (348)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99873
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.5e-37 Score=344.23 Aligned_cols=264 Identities=22% Similarity=0.346 Sum_probs=196.1
Q ss_pred CCCCCHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc--CchhHHHHHHHHHHHHhcC--CCCceeE
Q 042075 698 FPNISYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL--HHGAFKSFIAECNTLKNIR--HRNLVKI 773 (1033)
Q Consensus 698 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l 773 (1033)
...+.++.+....++|++.+.||+|+||.||+|.+. +++.||||+++.. .....+.+.+|++++++++ ||||+++
T Consensus 15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~ 93 (313)
T 3cek_A 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93 (313)
T ss_dssp -----CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred CCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence 344555556666788999999999999999999986 5889999998743 2344578899999999996 5999999
Q ss_pred eeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCC
Q 042075 774 LTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLK 853 (1033)
Q Consensus 774 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlk 853 (1033)
++++ ..++..++||| +.+++|.+++.. ...+++.++..++.|+++||+|||++ +|+|||||
T Consensus 94 ~~~~-----~~~~~~~lv~e-~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlk 154 (313)
T 3cek_A 94 YDYE-----ITDQYIYMVME-CGNIDLNSWLKK----------KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLK 154 (313)
T ss_dssp EEEE-----ECSSEEEEEEC-CCSEEHHHHHHH----------CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCC
T ss_pred EEEe-----ecCCEEEEEEe-cCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCC
Confidence 9995 34557899999 568899999952 34689999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCC-----------CCCCcccchHHHHHHHHHHH
Q 042075 854 PSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-----------SEVSINGDVYSYGILLLELV 922 (1033)
Q Consensus 854 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~vl~ell 922 (1033)
|+||++++ +.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 155 p~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 233 (313)
T 3cek_A 155 PANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233 (313)
T ss_dssp GGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred cccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence 99999964 8999999999987654433222223458999999999865 46889999999999999999
Q ss_pred hCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCC
Q 042075 923 TRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPED 1002 (1033)
Q Consensus 923 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 1002 (1033)
+|+.||............ ..+....... +...++++.+++.+||+.||++
T Consensus 234 ~g~~pf~~~~~~~~~~~~------------~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~ 283 (313)
T 3cek_A 234 YGKTPFQQIINQISKLHA------------IIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPKQ 283 (313)
T ss_dssp HSSCTTTTCCSHHHHHHH------------HHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTTT
T ss_pred hCCCchhhHHHHHHHHHH------------HHhcccccCC------------------cccchHHHHHHHHHHccCCccc
Confidence 999998633211111111 1111000000 0011345889999999999999
Q ss_pred CCCHHHHHHH
Q 042075 1003 RMDMTNVVHQ 1012 (1033)
Q Consensus 1003 RPt~~evl~~ 1012 (1033)
|||++|+++.
T Consensus 284 Rps~~ell~h 293 (313)
T 3cek_A 284 RISIPELLAH 293 (313)
T ss_dssp SCCHHHHHTS
T ss_pred CcCHHHHhcC
Confidence 9999999875
No 265
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9e-37 Score=345.76 Aligned_cols=280 Identities=20% Similarity=0.181 Sum_probs=197.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-cCCC
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGND 786 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 786 (1033)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+++.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 468999999999999999999999899999999986432 3335678899999999999999999999653221 1112
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..++||||++ ++|.+++. ..+++.++..++.||+.||+|||++ ||+||||||+||++++++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEE
Confidence 4599999996 68888773 2389999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhh
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTA 945 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 945 (1033)
|+|||+++...... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+.......
T Consensus 167 l~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~ 240 (353)
T 3coi_A 167 ILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVT 240 (353)
T ss_dssp ECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHH
T ss_pred EeecccccCCCCCc-----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 99999998653321 22348999999999877 678999999999999999999999986422111 111111100
Q ss_pred CCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 946 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 946 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.....+.....................+..-.......++++.+++.+||+.||++|||++|+++.
T Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 241 -GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp -CBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000000000000000000000000000111235678999999999999999999999864
No 266
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.8e-37 Score=351.86 Aligned_cols=279 Identities=20% Similarity=0.221 Sum_probs=194.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccc-cCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~ 788 (1033)
..+|++.++||+|+||+||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++..... ......
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3479999999999999999999986655 88887754322 12369999999999999999999754332 233347
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEec-CCCcEEE
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLD-EEMIAHV 867 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL 867 (1033)
++||||++++.+...... ......+++..+..++.||++||+|||++ ||+||||||+||+++ .++.+||
T Consensus 114 ~lv~e~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL 183 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHY-------AKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKL 183 (394)
T ss_dssp EEEEECCSEEHHHHHHHH-------HHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEEeeccCccHHHHHHHH-------HhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEE
Confidence 899999977544333211 12345689999999999999999999999 999999999999999 7999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTAL 946 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 946 (1033)
+|||+|+......... ...||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+....+..-
T Consensus 184 ~DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g 259 (394)
T 4e7w_A 184 IDFGSAKILIAGEPNV---SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLG 259 (394)
T ss_dssp CCCTTCEECCTTCCCC---SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred eeCCCcccccCCCCCc---ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 9999998765443322 23489999999998765 5899999999999999999999998643211 11111111111
Q ss_pred Ccc--hhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 947 PDH--VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 947 ~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
... .....++...... . ................++++.+++.+||+.||++|||+.|+++.
T Consensus 260 ~p~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 260 TPSREQIKTMNPNYMEHK--F---PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CCCHHHHHHHCGGGSSSC--C---CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHhhChhhhhhc--c---ccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 110 0000000000000 0 00000000000111234678999999999999999999999874
No 267
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.8e-37 Score=335.26 Aligned_cols=253 Identities=24% Similarity=0.257 Sum_probs=199.5
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++ ...+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSS 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eCCC
Confidence 3468999999999999999999999899999999987432 23457889999999999999999999995 3455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC---C
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE---M 863 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~---~ 863 (1033)
..++||||+++++|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +
T Consensus 95 ~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~ 161 (287)
T 2wei_A 95 SFYIVGELYTGGELFDEII----------KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161 (287)
T ss_dssp EEEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred eEEEEEEccCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcc
Confidence 7899999999999999884 234689999999999999999999999 99999999999999754 4
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
.+||+|||++.......... ...+|+.|+|||++.+ .++.++||||||+++|||++|+.||......+ .......
T Consensus 162 ~~kL~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~ 236 (287)
T 2wei_A 162 DIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVET 236 (287)
T ss_dssp CEEECSTTGGGTBCCCSSCS---CHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred cEEEeccCcceeecCCCccc---cccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHc
Confidence 79999999998664433222 2238999999999875 48999999999999999999999986321110 0000000
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
...... . +.....++++.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~------------~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 237 GKYAFD------------L----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CCCCCC------------S----------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCCCCC------------c----------------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000000 0 0001224568999999999999999999999874
No 268
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.6e-36 Score=347.28 Aligned_cols=204 Identities=26% Similarity=0.315 Sum_probs=170.7
Q ss_pred HHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CC-----CceeEeeeecc
Q 042075 706 LYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HR-----NLVKILTACSG 779 (1033)
Q Consensus 706 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~ 779 (1033)
.....++|++.+.||+|+||+||+|++..+++.||||+++.. .....++..|+.+++.++ |+ +|+++++++.
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~- 126 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM- 126 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE-
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec-
Confidence 334567999999999999999999999999999999999743 233467788999998884 55 4899998853
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (1033)
..+..++||||++ ++|.+++.. .....+++..+..++.|++.||+|||++ ..||+||||||+||++
T Consensus 127 ----~~~~~~lv~e~~~-~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 127 ----FRNHLCLVFEMLS-YNLYDLLRN--------TNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILL 192 (382)
T ss_dssp ----ETTEEEEEEECCC-CBHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEE
T ss_pred ----cCCceEEEEecCC-CCHHHHHhh--------cCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEE
Confidence 4458899999995 599999954 2234589999999999999999999952 2399999999999999
Q ss_pred c--CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCc
Q 042075 860 D--EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDI 930 (1033)
Q Consensus 860 ~--~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~ 930 (1033)
+ .++.+||+|||+|+...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCCcEEEEeccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 5 47789999999998764322 123489999999999999999999999999999999999999974
No 269
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.8e-37 Score=337.64 Aligned_cols=259 Identities=23% Similarity=0.298 Sum_probs=193.7
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeecccc--------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-------- 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 781 (1033)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ....+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45799999999999999999999889999999998643 334577899999999999999999999875321
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
....+..++||||+++|+|.++++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS---------ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDE 151 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH---------SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred cccCCceEEEEecCCCCCHHHhhhc---------cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcC
Confidence 1234578999999999999999953 335678899999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCc------------cccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCC
Q 042075 862 EMIAHVGDFGLATFLPLSHA------------QTSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
++.+||+|||.++....... ........||+.|+|||++.+. .++.++|||||||++|||++ ||
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~ 228 (303)
T 1zy4_A 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF 228 (303)
T ss_dssp TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---cc
Confidence 99999999999986543211 1111224489999999998764 68999999999999999998 54
Q ss_pred CccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 042075 929 DIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTN 1008 (1033)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 1008 (1033)
...... ........... ...... .....++.+.+++.+||+.||++|||+.|
T Consensus 229 ~~~~~~----~~~~~~~~~~~------~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 280 (303)
T 1zy4_A 229 STGMER----VNILKKLRSVS------IEFPPD------------------FDDNKMKVEKKIIRLLIDHDPNKRPGART 280 (303)
T ss_dssp SSHHHH----HHHHHHHHSTT------CCCCTT------------------CCTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCchhH----HHHHHhccccc------cccCcc------------------ccccchHHHHHHHHHHHhcCcccCcCHHH
Confidence 321111 11111000000 000000 00122355889999999999999999999
Q ss_pred HHHH
Q 042075 1009 VVHQ 1012 (1033)
Q Consensus 1009 vl~~ 1012 (1033)
+++.
T Consensus 281 ll~h 284 (303)
T 1zy4_A 281 LLNS 284 (303)
T ss_dssp HHHS
T ss_pred HhCC
Confidence 9863
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.9e-36 Score=340.15 Aligned_cols=259 Identities=18% Similarity=0.213 Sum_probs=175.6
Q ss_pred hhCCCCccc-eecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 709 ATDGFTSAN-LIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 709 ~~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
..++|.+.+ .||+|+||+||+|++..+++.||||++.... ....+....++.++||||+++++++.... ..+..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMH-HGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCce
Confidence 356888855 6999999999999999999999999986421 22222333456679999999999975422 22446
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC---CCc
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE---EMI 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 864 (1033)
.++||||+++|+|.+++.. .....+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.
T Consensus 101 ~~lv~e~~~gg~L~~~l~~--------~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~ 169 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQE--------RGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAV 169 (336)
T ss_dssp EEEEEECCTTEEHHHHHHT--------C-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEeccCCCCHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCce
Confidence 8999999999999999964 2334689999999999999999999999 9999999999999976 456
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||+++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .. ..
T Consensus 170 ~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~-~~ 243 (336)
T 3fhr_A 170 LKLTDFGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GM-KR 243 (336)
T ss_dssp EEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred EEEeccccceecccccc----ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hH-HH
Confidence 99999999987543322 12348999999999988899999999999999999999999986432211000 00 00
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.......... ......+++++.+++.+||+.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 244 RIRLGQYGFP-----------------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -------CCC-----------------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhccccccC-----------------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000 00001234568999999999999999999999984
No 271
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.8e-36 Score=368.53 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=204.6
Q ss_pred HhhCCCCccceecccCceeEEEEEeCC---CCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeecccccc
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDE---GKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 783 (1033)
...++|++.+.||+|+||.||+|.+.. .+..||||+++... ....+.+.+|+.++++++||||+++++++.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~----- 461 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT----- 461 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----
Confidence 345678899999999999999999854 35679999987533 334477899999999999999999999852
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCC
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEM 863 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~ 863 (1033)
++..++||||+++|+|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 462 -~~~~~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~ 528 (656)
T 2j0j_A 462 -ENPVWIIMELCTLGELRSFLQV---------RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 528 (656)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHH---------TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETT
T ss_pred -cCceEEEEEcCCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCC
Confidence 2357999999999999999953 334689999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 042075 864 IAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNLHNFA 942 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 942 (1033)
.+||+|||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ......
T Consensus 529 ~vkL~DFG~a~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i 605 (656)
T 2j0j_A 529 CVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 605 (656)
T ss_dssp EEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHH
T ss_pred CEEEEecCCCeecCCCccee-ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHH
Confidence 99999999998765433222 122347789999999988899999999999999999997 99998632111 111000
Q ss_pred hhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Q 042075 943 KTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNI 1019 (1033)
Q Consensus 943 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 1019 (1033)
.... +...+..+++.+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 606 ~~~~------------------------------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 606 ENGE------------------------------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HHTC------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HcCC------------------------------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0000 0001112346689999999999999999999999999998654
No 272
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=343.36 Aligned_cols=268 Identities=23% Similarity=0.319 Sum_probs=199.0
Q ss_pred CHHHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--chhHHHHHHHHHHHHhcCCCCceeEeeeecc
Q 042075 702 SYQNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSG 779 (1033)
Q Consensus 702 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 779 (1033)
..++.....++|++.+.||+|+||.||+|++.. .||+|+++... ....+.+.+|+.++++++||||+++++++.
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~- 99 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM- 99 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-
Confidence 344444556789999999999999999999863 38999987432 233456788999999999999999999954
Q ss_pred ccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe
Q 042075 780 VDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL 859 (1033)
Q Consensus 780 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll 859 (1033)
..+..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 100 ----~~~~~~iv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~ 163 (319)
T 2y4i_B 100 ----SPPHLAIITSLCKGRTLYSVVRD---------AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFY 163 (319)
T ss_dssp ----CSSCEEEECBCCCSEEHHHHTTS---------SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEE
T ss_pred ----cCCceEEEeecccCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEE
Confidence 44578999999999999999953 334689999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCC---ccccccccccccccccccccCC---------CCCCcccchHHHHHHHHHHHhCCCC
Q 042075 860 DEEMIAHVGDFGLATFLPLSH---AQTSSIFAKGSIGYIAPEYGLG---------SEVSINGDVYSYGILLLELVTRKKP 927 (1033)
Q Consensus 860 ~~~~~~kL~DfG~a~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwSlG~vl~elltg~~p 927 (1033)
+ ++.+||+|||+++...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 164 ~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 242 (319)
T 2y4i_B 164 D-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242 (319)
T ss_dssp C---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred e-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence 8 6799999999987653211 1122223348999999999864 4578999999999999999999999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
|..... .......... ..+.... ..++.++.+++.+||+.||++|||+.
T Consensus 243 ~~~~~~-----~~~~~~~~~~-----~~~~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rpt~~ 291 (319)
T 2y4i_B 243 FKTQPA-----EAIIWQMGTG-----MKPNLSQ---------------------IGMGKEISDILLFCWAFEQEERPTFT 291 (319)
T ss_dssp SSSCCH-----HHHHHHHHTT-----CCCCCCC---------------------SSCCTTHHHHHHHHHCSSTTTSCCHH
T ss_pred CCCCCH-----HHHHHHhccC-----CCCCCCc---------------------CCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 863211 1111100000 0000000 01123488999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 042075 1008 NVVHQLQSIKNILL 1021 (1033)
Q Consensus 1008 evl~~L~~i~~~~~ 1021 (1033)
|+++.|+++.+...
T Consensus 292 ~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 292 KLMDMLEKLPKRNR 305 (319)
T ss_dssp HHHHHHTTC-----
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999887653
No 273
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.3e-36 Score=341.60 Aligned_cols=279 Identities=21% Similarity=0.268 Sum_probs=199.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCC-eEEEEEEeeccCchhHHHHHHHHHHHHhcCCCC------ceeEeeeeccccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGK-TIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRN------LVKILTACSGVDY 782 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 782 (1033)
.++|++.+.||+|+||+||+|.+..++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~----- 91 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF----- 91 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE-----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee-----
Confidence 468999999999999999999997666 79999998743 234567889999999997665 88888884
Q ss_pred cCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe---
Q 042075 783 QGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL--- 859 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll--- 859 (1033)
...+..++||||+ ++++.+++.. .....+++.++..++.||+.||+|||++ +|+||||||+||++
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~--------~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKE--------NNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNS 159 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHH--------TTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecc
Confidence 4455889999999 6677777743 2334689999999999999999999999 99999999999999
Q ss_pred ----------------cCCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh
Q 042075 860 ----------------DEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT 923 (1033)
Q Consensus 860 ----------------~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~ellt 923 (1033)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence 567899999999998654322 12348999999999999999999999999999999999
Q ss_pred CCCCCCccccCCccHHHHHhh--hCCcchhhhcc-------c--ccCCCchhhh-hccchhhhhhhhhhHHHHHHHHHHH
Q 042075 924 RKKPTDIMFEGDMNLHNFAKT--ALPDHVVDIVD-------S--TLLSDDEDLA-VHGNQRQRQARINSKIECLVAMARI 991 (1033)
Q Consensus 924 g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~d-------~--~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l 991 (1033)
|+.||......+ ........ ..+........ . .......... ....................++.++
T Consensus 235 g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 313 (355)
T 2eu9_A 235 GFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 313 (355)
T ss_dssp SSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred CCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHH
Confidence 999996432111 11111110 11111000000 0 0000000000 0000000000111122345679999
Q ss_pred HhhccCCCCCCCCCHHHHHHH
Q 042075 992 GVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 992 ~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
+.+||+.||++|||+.|+++.
T Consensus 314 i~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 314 MRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHhcCChhhCcCHHHHhcC
Confidence 999999999999999999853
No 274
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=348.76 Aligned_cols=210 Identities=21% Similarity=0.276 Sum_probs=155.7
Q ss_pred CCCc-cceecccCceeEEEEEeC--CCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCce
Q 042075 712 GFTS-ANLIGAGSFGSVYKGILD--EGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 712 ~y~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
.|++ .++||+|+||+||+|++. .+++.||||+++... ....+.+|+.++++++||||+++++++.. ..+...
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCeE
Confidence 4555 458999999999999975 467889999987543 23568899999999999999999999642 345578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEe----cCCCc
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLL----DEEMI 864 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll----~~~~~ 864 (1033)
++||||++ ++|.+++....... .......+++.++..++.||+.||+|||++ +|+||||||+||++ +.++.
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEeCCC-CCHHHHHHHhcccc-ccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 99999996 58888875311100 011233589999999999999999999999 99999999999999 67789
Q ss_pred EEEeecccceecCCCCcc-ccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCcc
Q 042075 865 AHVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPTDIM 931 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~vl~elltg~~p~~~~ 931 (1033)
+||+|||+|+........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999999876433211 122234589999999998874 5899999999999999999999999643
No 275
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.6e-36 Score=338.80 Aligned_cols=277 Identities=17% Similarity=0.237 Sum_probs=237.0
Q ss_pred cccccCCChhhHHHHHHHHHhcccCCCCCCCCC----CCCCCCcceeeeEecC-------CCCCeEEEEEcCCCCCCccc
Q 042075 32 TASTVAGNETDRLALLEFKSKITHDPLGVFGSW----NESIHFCQWHGVTCSR-------RQHQRVTILDLKSLKLAGYI 100 (1033)
Q Consensus 32 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~W----~~~~~~c~w~gv~C~~-------~~~~~v~~l~l~~~~l~g~~ 100 (1033)
.....++..+|++||++||+++..|+.+.+++| ....++|.|.||+|+. ....+|+.|+|++++++ .+
T Consensus 18 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~l 96 (328)
T 4fcg_A 18 YFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QF 96 (328)
T ss_dssp CCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred eeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hc
Confidence 344455668899999999999987888888999 4567899999999963 12357899999999998 78
Q ss_pred ccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCccc--
Q 042075 101 SAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGS-- 178 (1033)
Q Consensus 101 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-- 178 (1033)
|+.++++++|++|+|++|.++ .+|..|+.+++|++|+|++|.++ .+|..++++++|++|+|++|.+.+.+|..+..
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 888889999999999999998 88999999999999999999998 88999999999999999999888889888765
Q ss_pred -------ccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCC
Q 042075 179 -------LSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNI 251 (1033)
Q Consensus 179 -------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 251 (1033)
+++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..|+.+++|++|+|++|++.+.+|..+.++
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l 252 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGR 252 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCC
T ss_pred chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCC
Confidence 889999999999998 778888889999999999999985 66678889999999999999888888888888
Q ss_pred CceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCcccccccccccc
Q 042075 252 SSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLT 314 (1033)
Q Consensus 252 ~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (1033)
++|+.|++++|.+.+.+|..+ ..+++|++|+|++|.+.+.+|..+.++++|+.+++..|.+.
T Consensus 253 ~~L~~L~L~~n~~~~~~p~~~-~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 253 APLKRLILKDCSNLLTLPLDI-HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCEEECTTCTTCCBCCTTG-GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCEEECCCCCchhhcchhh-hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 888888888888888888765 36888888888888888888888888888888888877665
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.6e-37 Score=339.36 Aligned_cols=247 Identities=21% Similarity=0.257 Sum_probs=191.0
Q ss_pred HHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc------hhHHHHHHHHHHHHhc----CCCCceeEe
Q 042075 705 NLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH------GAFKSFIAECNTLKNI----RHRNLVKIL 774 (1033)
Q Consensus 705 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~ 774 (1033)
+.....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 344556789999999999999999999988999999999964322 1223456799999998 899999999
Q ss_pred eeeccccccCCCceeEEEEc-ccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCC
Q 042075 775 TACSGVDYQGNDFKALVFEF-MHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLK 853 (1033)
Q Consensus 775 ~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlk 853 (1033)
+++ ...+..++|||| +.+++|.+++.. ...+++.++..++.||+.||+|||++ +|+|||||
T Consensus 105 ~~~-----~~~~~~~~v~e~~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 166 (312)
T 2iwi_A 105 DWF-----ETQEGFMLVLERPLPAQDLFDYITE----------KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIK 166 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHH----------HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCS
T ss_pred EEE-----ecCCeEEEEEEecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCC
Confidence 994 445578999999 789999999942 34689999999999999999999999 99999999
Q ss_pred CCCeEec-CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCCCCcc
Q 042075 854 PSNVLLD-EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVS-INGDVYSYGILLLELVTRKKPTDIM 931 (1033)
Q Consensus 854 p~NIll~-~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~vl~elltg~~p~~~~ 931 (1033)
|+||+++ +++.+||+|||+++....... ....|+..|+|||++.+..+. .++|||||||++|||++|+.||...
T Consensus 167 p~Nil~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 242 (312)
T 2iwi_A 167 DENILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242 (312)
T ss_dssp GGGEEEETTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred hhhEEEeCCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence 9999999 889999999999987654322 223489999999998776664 5899999999999999999998531
Q ss_pred ccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 932 FEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
. ....... .. +.....++.+++.+||+.||++|||++|+++
T Consensus 243 ~-------~~~~~~~----------~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 243 Q-------EILEAEL----------HF----------------------PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp H-------HHHHTCC----------CC----------------------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred H-------HHhhhcc----------CC----------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 0000000 00 0012345889999999999999999999987
Q ss_pred H
Q 042075 1012 Q 1012 (1033)
Q Consensus 1012 ~ 1012 (1033)
.
T Consensus 284 ~ 284 (312)
T 2iwi_A 284 D 284 (312)
T ss_dssp S
T ss_pred C
Confidence 3
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.5e-36 Score=345.08 Aligned_cols=285 Identities=19% Similarity=0.252 Sum_probs=203.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-----------CCCceeEeeeec
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-----------HRNLVKILTACS 778 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 778 (1033)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999999889999999998743 234467889999999886 899999999975
Q ss_pred cccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeE
Q 042075 779 GVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVL 858 (1033)
Q Consensus 779 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl 858 (1033)
... ......++||||+ +++|.+++.. .....+++..+..++.||+.||+|||+++ ||+||||||+||+
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIl 164 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKK--------YEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVL 164 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHH--------hhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeE
Confidence 332 2233689999999 8999999954 23345899999999999999999999843 8999999999999
Q ss_pred ec------CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccc
Q 042075 859 LD------EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMF 932 (1033)
Q Consensus 859 l~------~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~ 932 (1033)
++ ..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 165 MEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp EEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EeccCCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 94 44489999999998764322 12348999999999999999999999999999999999999997432
Q ss_pred cCC-----ccHHHHHhhh--CCcch-------hhhcccc-cCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccC
Q 042075 933 EGD-----MNLHNFAKTA--LPDHV-------VDIVDST-LLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSM 997 (1033)
Q Consensus 933 ~~~-----~~~~~~~~~~--~~~~~-------~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 997 (1033)
... ..+....... .+... ....+.. ...................+...+...++++.+++.+||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 319 (373)
T 1q8y_A 240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 319 (373)
T ss_dssp -----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC
T ss_pred ccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhc
Confidence 111 0111111100 00000 0000000 0000000000000011112223345677889999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 042075 998 ESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 998 ~dP~~RPt~~evl~~ 1012 (1033)
.||++|||++|+++.
T Consensus 320 ~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 320 LDPRKRADAGGLVNH 334 (373)
T ss_dssp SSTTTCBCHHHHHTC
T ss_pred cCccccCCHHHHhhC
Confidence 999999999999874
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.8e-37 Score=341.51 Aligned_cols=245 Identities=21% Similarity=0.236 Sum_probs=197.5
Q ss_pred HHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCch------hHHHHHHHHHHHHhcC--CCCceeEeeeec
Q 042075 707 YNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHG------AFKSFIAECNTLKNIR--HRNLVKILTACS 778 (1033)
Q Consensus 707 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 778 (1033)
....++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.++++++ ||||+++++++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~- 117 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF- 117 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE-
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE-
Confidence 34457899999999999999999999989999999999753221 2245678999999995 59999999995
Q ss_pred cccccCCCceeEEEEcccC-CchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCe
Q 042075 779 GVDYQGNDFKALVFEFMHN-RSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNV 857 (1033)
Q Consensus 779 ~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NI 857 (1033)
..++..++||||+.+ ++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||
T Consensus 118 ----~~~~~~~lv~e~~~~~~~L~~~l~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 180 (320)
T 3a99_A 118 ----ERPDSFVLILERPEPVQDLFDFIT----------ERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENI 180 (320)
T ss_dssp ----ECSSEEEEEEECCSSEEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred ----ecCCcEEEEEEcCCCCccHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHE
Confidence 445578999999976 89999984 245689999999999999999999999 999999999999
Q ss_pred Eec-CCCcEEEeecccceecCCCCccccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCccccCC
Q 042075 858 LLD-EEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPTDIMFEGD 935 (1033)
Q Consensus 858 ll~-~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~vl~elltg~~p~~~~~~~~ 935 (1033)
+++ +++.+||+|||+++....... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 181 ll~~~~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--- 253 (320)
T 3a99_A 181 LIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--- 253 (320)
T ss_dssp EEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---
T ss_pred EEeCCCCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---
Confidence 999 788999999999987654322 12348999999999877665 688999999999999999999985311
Q ss_pred ccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 936 MNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
....... ... ...++++.+++.+||+.||++|||++|+++.
T Consensus 254 ----~~~~~~~----------~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 254 ----EIIRGQV----------FFR----------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----HHHHCCC----------CCS----------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----hhhcccc----------ccc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0100000 000 0123458899999999999999999999873
No 279
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.1e-36 Score=337.63 Aligned_cols=260 Identities=22% Similarity=0.254 Sum_probs=177.9
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC-chhHHHHHHHHH-HHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH-HGAFKSFIAECN-TLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|.+..+++.||||+++... .....++..|+. +++.++||||+++++++. .++.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-----~~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-----REGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-----CSSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-----eCCc
Confidence 468899999999999999999999899999999997543 233345566666 677789999999999953 4457
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.++||||+++ +|.+++.... ......+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl 167 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVY-----SVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKL 167 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHH-----HTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEE
T ss_pred eEEEEeecCC-ChHHHHHHHH-----hhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEE
Confidence 8999999975 8888774210 11245689999999999999999999985 28999999999999999999999
Q ss_pred eecccceecCCCCcccccccccccccccccccc----CCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHh
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYG----LGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAK 943 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~ 943 (1033)
+|||+++......... ...||+.|+|||++ .+..++.++|||||||++|||++|+.||.......... .
T Consensus 168 ~Dfg~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~ 240 (327)
T 3aln_A 168 CDFGISGQLVDSIAKT---RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL----T 240 (327)
T ss_dssp CCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------C
T ss_pred ccCCCceecccccccc---cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH----H
Confidence 9999998664332221 23489999999998 45678999999999999999999999986321111000 0
Q ss_pred hhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 944 TALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 944 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
........ .+... ....+++++.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~-----~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 241 QVVKGDPP-----QLSNS------------------EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCSCCC-----CCCCC------------------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhcCCCC-----CCCCc------------------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00000000 00000 000123568999999999999999999999874
No 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.3e-36 Score=357.30 Aligned_cols=286 Identities=22% Similarity=0.242 Sum_probs=204.1
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeecc-CchhHHHHHHHHHHHHhcCCCCceeEeeeecccc-ccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~ 787 (1033)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+++.+|++++++++||||+++++++.... +..++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999999989999999998753 3344577899999999999999999999865422 233667
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCc---
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMI--- 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~--- 864 (1033)
.++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~-------~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~ 162 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQF-------ENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLI 162 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSS-------SCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCE
T ss_pred EEEEEEeCCCCCHHHHHHhc-------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCcee
Confidence 89999999999999999641 1233588899999999999999999999 9999999999999997664
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||.+.......... ...||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....+...
T Consensus 163 vKL~DFG~a~~~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~ 235 (676)
T 3qa8_A 163 HKIIDLGYAKELDQGELCT---EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGK 235 (676)
T ss_dssp EEECSCCCCCBTTSCCCCC---CCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTT
T ss_pred EEEcccccccccccccccc---cccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhh
Confidence 9999999998765443222 2458999999999999999999999999999999999999986321 11111111
Q ss_pred hCCcchhh-hcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHHHHH
Q 042075 945 ALPDHVVD-IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTN-----VVHQLQSIKN 1018 (1033)
Q Consensus 945 ~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e-----vl~~L~~i~~ 1018 (1033)
........ .......+.... ... ...........++.+.+++.+||+.||++|||++| ..+.++.+.+
T Consensus 236 i~~~~~~~~~~~~~l~g~~~~----~~~--lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 236 VREKSNEHIVVYDDLTGAVKF----SSV--LPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CC------CCSCCCCSSSCCC----CSS--SCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhcccchhhhhhhhhcccccc----ccc--cCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 11000000 000000000000 000 00000011234577999999999999999999988 4455555543
No 281
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-35 Score=330.29 Aligned_cols=257 Identities=30% Similarity=0.467 Sum_probs=244.7
Q ss_pred CcccEEEccCCCCCc--cCCccccCCCCCCEEEccc-CcccccCChhhhcCCCCcEEEccccccccccCcccccce-ece
Q 042075 379 TTLEVLLLDSNKIFG--NIPAAFGKFVKLLRLEMWN-NRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFN 454 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~ 454 (1033)
.+++.|++++|.+++ .+|..|.++++|++|++++ |.+.+.+|..|..+++|++|+|++|++++.+|..+..++ |++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 478999999999999 8999999999999999995 999999999999999999999999999999999999998 999
Q ss_pred eeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccc
Q 042075 455 LQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENK 534 (1033)
Q Consensus 455 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 534 (1033)
|+|++|.+++.+|..|..+++|++|+|++|++++.+|..+..+...|+.|++++|++++.+|..+..++ |+.|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 999999999999999999999999999999999999999999884459999999999999999999998 9999999999
Q ss_pred cccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCc
Q 042075 535 LRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 535 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 614 (1033)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|++|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977776 889999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccccCCccc
Q 042075 615 GVFRNASITSVLGNLKLCGGTHE 637 (1033)
Q Consensus 615 ~~~~~~~~~~~~~n~~lcg~~~~ 637 (1033)
..+..+....+.+|+.+||.|++
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccccccChHHhcCCCCccCCCCC
Confidence 88899999999999999998876
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9.4e-36 Score=332.34 Aligned_cols=254 Identities=21% Similarity=0.254 Sum_probs=179.5
Q ss_pred hhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCch-h-HHHHHHHHHHHHhcCCCCceeEeeeeccccccCCC
Q 042075 709 ATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHG-A-FKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 709 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..++|++.+.||+|+||.||+|++..+++.||||+++..... . .+.+.++..+++.++||||+++++++ ..++
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-----~~~~ 97 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF-----ITNT 97 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE-----ecCC
Confidence 356889999999999999999999989999999999754322 2 23344555678888999999999995 3455
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHh-CCCCCcEeccCCCCCeEecCCCcE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHH-DCQPPIVHCDLKPSNVLLDEEMIA 865 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivHrDlkp~NIll~~~~~~ 865 (1033)
..++||||+ ++.+..+... ....+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+
T Consensus 98 ~~~lv~e~~-~~~~~~l~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~ 164 (318)
T 2dyl_A 98 DVFIAMELM-GTCAEKLKKR---------MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQI 164 (318)
T ss_dssp EEEEEECCC-SEEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCE
T ss_pred cEEEEEecc-CCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCE
Confidence 889999999 5566555531 24568999999999999999999998 6 89999999999999999999
Q ss_pred EEeecccceecCCCCccccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHH
Q 042075 866 HVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHN 940 (1033)
Q Consensus 866 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~ 940 (1033)
||+|||++.......... ...||+.|+|||++. ...++.++|||||||++|||++|+.||............
T Consensus 165 kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 241 (318)
T 2dyl_A 165 KLCDFGISGRLVDDKAKD---RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241 (318)
T ss_dssp EECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred EEEECCCchhccCCcccc---ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH
Confidence 999999997654432221 234899999999984 456889999999999999999999998632211111111
Q ss_pred HHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 941 FAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 941 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
...... . .... ...++.++.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~-~--------~~~~--------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 242 VLQEEP-P--------LLPG--------------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHSCC-C--------CCCS--------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HhccCC-C--------CCCc--------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111000 0 0000 00123558999999999999999999999874
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-35 Score=338.63 Aligned_cols=131 Identities=22% Similarity=0.264 Sum_probs=98.5
Q ss_pred hhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccc
Q 042075 502 IVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQN 581 (1033)
Q Consensus 502 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 581 (1033)
+.|++++|.+++..|..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N 328 (390)
T 3o6n_A 251 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN 328 (390)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSS
T ss_pred cEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCC
Confidence 44444444444455667777888999999999988 46777788899999999999998 67888888999999999999
Q ss_pred cccccCCcccccccccceeecCCCcCcccCCCcccccccccccccccccccCCcccc
Q 042075 582 NLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVFRNASITSVLGNLKLCGGTHEF 638 (1033)
Q Consensus 582 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lcg~~~~~ 638 (1033)
+|+.. | +..+++|+.|++++|++++.... ..+.......+.++...|+.+...
T Consensus 329 ~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~ 381 (390)
T 3o6n_A 329 SIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQL 381 (390)
T ss_dssp CCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTCEE
T ss_pred cccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccccc
Confidence 99854 3 67788999999999999885432 344455555667777778765544
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.3e-35 Score=321.67 Aligned_cols=241 Identities=10% Similarity=0.072 Sum_probs=183.0
Q ss_pred CCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC---chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 711 DGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 711 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTRAG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EECCc
Confidence 57999999999999999999999889999999997543 23347789999999999999999999995 34557
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.|+||||++|++|.++++. .....++.+++.|++.||+|||++ ||+||||||+||++++++.+||
T Consensus 106 ~~lv~e~~~g~~L~~~l~~------------~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl 170 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADT------------SPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVL 170 (286)
T ss_dssp EEEEEECCCEEEHHHHHTT------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEE
T ss_pred EEEEEEecCCCCHHHHHhc------------CCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEE
Confidence 8999999999999999842 135567889999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+++| |++ .++.++|||||||++|||++|+.||......+....
T Consensus 171 ~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-------- 213 (286)
T 3uqc_A 171 AYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-------- 213 (286)
T ss_dssp CSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------
T ss_pred Eecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------
Confidence 8443 333 368899999999999999999999964322110000
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhhhchhhc
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQLQSIKNILLGQRIVS 1027 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~ 1027 (1033)
........... .......+++++.+++.+||+.||++| |+.|+++.|+++...........
T Consensus 214 ------~~~~~~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~~~~~ 274 (286)
T 3uqc_A 214 ------AERDTAGQPIE------------PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRTEVLG 274 (286)
T ss_dssp ------CCBCTTSCBCC------------HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---------
T ss_pred ------HHHHhccCCCC------------hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCccCCCC
Confidence 00000000000 000011234668999999999999999 99999999999987665444433
No 285
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.5e-35 Score=341.39 Aligned_cols=256 Identities=19% Similarity=0.240 Sum_probs=182.5
Q ss_pred CCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCceeE
Q 042075 712 GFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKAL 790 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~l 790 (1033)
.|.+.++||+|+||+||.+... +++.||||++... ..+.+.+|+.+++++ +||||+++++++ ..++..++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEEE
Confidence 4555688999999999876544 6899999998643 235678999999987 899999999984 45568999
Q ss_pred EEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCC--------
Q 042075 791 VFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEE-------- 862 (1033)
Q Consensus 791 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~-------- 862 (1033)
||||+. |+|.+++....... ......++.++..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EECCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCT
T ss_pred EEecCC-CCHHHHHhccCCCc---hhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccc
Confidence 999995 69999996422111 0111123445678999999999999999 99999999999999754
Q ss_pred -----CcEEEeecccceecCCCCccc--cccccccccccccccccCC-------CCCCcccchHHHHHHHHHHHh-CCCC
Q 042075 863 -----MIAHVGDFGLATFLPLSHAQT--SSIFAKGSIGYIAPEYGLG-------SEVSINGDVYSYGILLLELVT-RKKP 927 (1033)
Q Consensus 863 -----~~~kL~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~vl~ellt-g~~p 927 (1033)
+.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.|
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 489999999999875543221 1223459999999999865 578999999999999999999 9999
Q ss_pred CCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042075 928 TDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMT 1007 (1033)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 1007 (1033)
|....... ............ . ........++++.+++.+||+.||++|||+.
T Consensus 240 f~~~~~~~---~~i~~~~~~~~~-------~------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 291 (434)
T 2rio_A 240 FGDKYSRE---SNIIRGIFSLDE-------M------------------KCLHDRSLIAEATDLISQMIDHDPLKRPTAM 291 (434)
T ss_dssp TCSTTTHH---HHHHHTCCCCCC-------C------------------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCchhhH---HHHhcCCCCccc-------c------------------cccccccchHHHHHHHHHHhhCChhhCCCHH
Confidence 86322111 111111100000 0 0001123567789999999999999999999
Q ss_pred HHHH
Q 042075 1008 NVVH 1011 (1033)
Q Consensus 1008 evl~ 1011 (1033)
||++
T Consensus 292 eil~ 295 (434)
T 2rio_A 292 KVLR 295 (434)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9986
No 286
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=336.03 Aligned_cols=250 Identities=21% Similarity=0.274 Sum_probs=180.2
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCCce
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 788 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 788 (1033)
..+|.+.++||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||+++++++ ......
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTE-----KDRQFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEE-----EETTEE
T ss_pred cEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCEE
Confidence 34688899999999999664333 3688999999865332 2356899999999 899999999984 445578
Q ss_pred eEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC-----CC
Q 042075 789 ALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE-----EM 863 (1033)
Q Consensus 789 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-----~~ 863 (1033)
|+||||+. |+|.+++.. ........++..++.||+.||+|||++ +|+||||||+||+++. ..
T Consensus 94 ~lv~E~~~-g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~ 160 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQ---------KDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKI 160 (432)
T ss_dssp EEEEECCS-EEHHHHHHS---------SSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBC
T ss_pred EEEEECCC-CCHHHHHHh---------cCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCce
Confidence 99999995 699999964 222344445678999999999999999 9999999999999953 23
Q ss_pred cEEEeecccceecCCCCcc-ccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHh-CCCCCCccccCCccH
Q 042075 864 IAHVGDFGLATFLPLSHAQ-TSSIFAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVT-RKKPTDIMFEGDMNL 938 (1033)
Q Consensus 864 ~~kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~vl~ellt-g~~p~~~~~~~~~~~ 938 (1033)
.+||+|||+|+........ .......||+.|+|||++. ...++.++||||+||++|||++ |+.||...... .
T Consensus 161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~ 237 (432)
T 3p23_A 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---Q 237 (432)
T ss_dssp CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---H
T ss_pred eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---H
Confidence 6889999999876543211 2222345999999999987 4567889999999999999999 99998522111 0
Q ss_pred HHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 042075 939 HNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVH 1011 (1033)
Q Consensus 939 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 1011 (1033)
... ........... ........+.+++.+||+.||++|||++||++
T Consensus 238 ~~~---~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 238 ANI---LLGACSLDCLH------------------------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHH---HTTCCCCTTSC------------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHH---HhccCCccccC------------------------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000 00000000000 00123445789999999999999999999984
No 287
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-35 Score=337.95 Aligned_cols=259 Identities=16% Similarity=0.130 Sum_probs=187.3
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc---hhHHHHHHHHHHHHhcCC-CCceeEeee---------
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH---GAFKSFIAECNTLKNIRH-RNLVKILTA--------- 776 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~~~--------- 776 (1033)
...|...+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.+++.++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3457788999999999999999999999999999873322 235788999999999977 322111111
Q ss_pred e------------ccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCC
Q 042075 777 C------------SGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQ 844 (1033)
Q Consensus 777 ~------------~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 844 (1033)
+ ...........+++|+++ +++|.++++..... ......+++..++.++.||++||+|||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 230 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY-- 230 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH---TTTSHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 0 000000122356777765 78999998421110 12345688999999999999999999999
Q ss_pred CCcEeccCCCCCeEecCCCcEEEeecccceecCCCCcccccccccccccccccccc----------CCCCCCcccchHHH
Q 042075 845 PPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYG----------LGSEVSINGDVYSY 914 (1033)
Q Consensus 845 ~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwSl 914 (1033)
+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||
T Consensus 231 -~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSl 303 (413)
T 3dzo_A 231 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303 (413)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHH
T ss_pred -CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHH
Confidence 9999999999999999999999999999865432 222347 999999998 66678999999999
Q ss_pred HHHHHHHHhCCCCCCccccCCccHHHHHhhhCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhh
Q 042075 915 GILLLELVTRKKPTDIMFEGDMNLHNFAKTALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVA 994 (1033)
Q Consensus 915 G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 994 (1033)
||++|||++|+.||........ ...++. .. ..+++++.+++.+
T Consensus 304 Gvil~elltg~~Pf~~~~~~~~-------------~~~~~~----~~--------------------~~~~~~~~~li~~ 346 (413)
T 3dzo_A 304 GLAIYWIWCADLPNTDDAALGG-------------SEWIFR----SC--------------------KNIPQPVRALLEG 346 (413)
T ss_dssp HHHHHHHHHSSCCCCTTGGGSC-------------SGGGGS----SC--------------------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcchhhh-------------HHHHHh----hc--------------------ccCCHHHHHHHHH
Confidence 9999999999999863221110 000000 00 0123568999999
Q ss_pred ccCCCCCCCCCHHHHHHH--HHHHHH
Q 042075 995 CSMESPEDRMDMTNVVHQ--LQSIKN 1018 (1033)
Q Consensus 995 cl~~dP~~RPt~~evl~~--L~~i~~ 1018 (1033)
||+.||++|||+.|+++. ++++++
T Consensus 347 ~l~~dP~~Rpt~~~~l~~~~~~~~~~ 372 (413)
T 3dzo_A 347 FLRYPKEDRLLPLQAMETPEYEQLRT 372 (413)
T ss_dssp HTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred HccCChhhCcCHHHHHhCHHHHHHHH
Confidence 999999999999888654 444433
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-34 Score=355.52 Aligned_cols=247 Identities=23% Similarity=0.312 Sum_probs=195.6
Q ss_pred hCCCCccceecccCceeEEEEEeCC-CCeEEEEEEeeccC-chhHHHHHHHHHHHHhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDE-GKTIVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|++.+.||+|+||+||+|.+.. +++.||||++.... ......+.+|++++++++||||++++++|..........
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 3689999999999999999999975 68999999986433 344567889999999999999999999976543222223
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEE
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHV 867 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL 867 (1033)
.|+||||+++++|.+++. ..+++.+++.++.||+.||+|||++ ||+||||||+||+++++ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~------------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHh------------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEE
Confidence 699999999999998763 1589999999999999999999999 99999999999999886 8999
Q ss_pred eecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhhhCC
Q 042075 868 GDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKTALP 947 (1033)
Q Consensus 868 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 947 (1033)
+|||+++..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||....... .+
T Consensus 223 ~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------~~ 285 (681)
T 2pzi_A 223 IDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------LP 285 (681)
T ss_dssp CCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------CC
T ss_pred EecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc----------cc
Confidence 999999876443 223489999999998765 4899999999999999999998875321110 00
Q ss_pred cchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHH
Q 042075 948 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRM-DMTNVVHQLQSIKN 1018 (1033)
Q Consensus 948 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~i~~ 1018 (1033)
... ......+.+.+++.+||+.||++|| +++++.+.+..+..
T Consensus 286 ------------~~~-----------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ------------EDD-----------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ------------TTC-----------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ------------ccc-----------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 000 0112345689999999999999999 56777777777654
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.2e-34 Score=314.44 Aligned_cols=237 Identities=18% Similarity=0.245 Sum_probs=180.9
Q ss_pred hCCCCcc-ceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHH-HhcCCCCceeEeeeeccccccCCCc
Q 042075 710 TDGFTSA-NLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTL-KNIRHRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 710 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.++|.+. +.||+|+||.||+|.+..+++.||+|+++.. ..+.+|+.++ +..+||||+++++++... ...+..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 4567777 7899999999999999989999999998632 4567889888 555999999999986532 123557
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC---CCc
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE---EMI 864 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 864 (1033)
.++||||+++|+|.+++.. .....+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~--------~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~ 158 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQD--------RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 158 (299)
T ss_dssp EEEEECCCCSCBHHHHHHH--------CTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCC
T ss_pred EEEEEeecCCCcHHHHHHh--------ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCc
Confidence 8999999999999999964 2334689999999999999999999999 9999999999999997 789
Q ss_pred EEEeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccCCccHHHHHhh
Q 042075 865 AHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEGDMNLHNFAKT 944 (1033)
Q Consensus 865 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 944 (1033)
+||+|||++.... +..++.++||||+||++|||++|+.||........
T Consensus 159 ~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------- 206 (299)
T 3m2w_A 159 LKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------- 206 (299)
T ss_dssp EEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------
T ss_pred EEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh--------
Confidence 9999999987532 23467889999999999999999999853211100
Q ss_pred hCCcchhhhcccccCCCchhhhhccchhhhhhhhhhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 042075 945 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMARIGVACSMESPEDRMDMTNVVHQ 1012 (1033)
Q Consensus 945 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 1012 (1033)
.......+........ ......+++++.+++.+||+.||++|||++|+++.
T Consensus 207 --~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 207 --SPGMKTRIRMGQYEFP---------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp ---CCSCCSSCTTCCSSC---------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --hHHHHHHHhhccccCC---------------chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000000000000 00011235678999999999999999999999975
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6e-33 Score=313.68 Aligned_cols=305 Identities=25% Similarity=0.372 Sum_probs=169.4
Q ss_pred CCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccce
Q 042075 105 GNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEY 184 (1033)
Q Consensus 105 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 184 (1033)
..+++|++|++++|.+. .+| .+..+++|++|+|++|.+++ +|. +.++++|++|++++|.+++ +| .+.++++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 34566666677666665 333 36666677777777776663 333 6666677777777776663 32 4666666777
Q ss_pred eeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccc
Q 042075 185 FSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQI 264 (1033)
Q Consensus 185 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l 264 (1033)
|++++|++++..+ +.++++|++|++++|.....++ .+..+++|++|++++|++++..+ +..+++|+.|++++|.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 7777666664332 6666667777776665443333 36666666666666666664332 55556666666666665
Q ss_pred cCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccc
Q 042075 265 QGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDL 344 (1033)
Q Consensus 265 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 344 (1033)
.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++.++ +..++
T Consensus 190 ~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~-------------------- 243 (347)
T 4fmz_A 190 EDISP---LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLS-------------------- 243 (347)
T ss_dssp CCCGG---GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCT--------------------
T ss_pred ccccc---ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCC--------------------
Confidence 53222 3345556666666666554332 5555566666666665554332 33333
Q ss_pred hhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhh
Q 042075 345 NFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIG 424 (1033)
Q Consensus 345 ~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 424 (1033)
+|+.|++++|.+++. +.+..+++|++|++++|++++. +.+.
T Consensus 244 -----------------------------------~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 244 -----------------------------------QLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp -----------------------------------TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred -----------------------------------CCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 344444444444432 2344555555555555555532 2355
Q ss_pred cCCCCcEEEccccccccccCcccccce-eceeeccccccCCCCCCccCCCCcccEEecCCCccC
Q 042075 425 ELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLT 487 (1033)
Q Consensus 425 ~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 487 (1033)
.+++|+.|+|++|++++..|..++.++ |++|+|++|.+++..| +..+++|++|++++|.|+
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 555555555555555555555555444 5555555555554444 556667777777777664
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.7e-33 Score=336.20 Aligned_cols=307 Identities=23% Similarity=0.229 Sum_probs=226.1
Q ss_pred eEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcc
Q 042075 85 RVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLS 164 (1033)
Q Consensus 85 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 164 (1033)
.+..+++.++.+++..+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 45678888888876555567899999999999999998888899999999999999999999888899999999999999
Q ss_pred cccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCC
Q 042075 165 SNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTI 244 (1033)
Q Consensus 165 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 244 (1033)
+|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-- 206 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-- 206 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE--
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc--
Confidence 99999666666899999999999999999999999999999999999999999653 5678899999999998874
Q ss_pred cccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhc
Q 042075 245 PSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQ 324 (1033)
Q Consensus 245 p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~ 324 (1033)
+...++|+.|++++|.+... |.. + .++|+.|+|++|.+++. +.+..+
T Consensus 207 ---l~~~~~L~~L~ls~n~l~~~-~~~-------------------------~--~~~L~~L~L~~n~l~~~-~~l~~l- 253 (597)
T 3oja_B 207 ---LAIPIAVEELDASHNSINVV-RGP-------------------------V--NVELTILKLQHNNLTDT-AWLLNY- 253 (597)
T ss_dssp ---EECCTTCSEEECCSSCCCEE-ECS-------------------------C--CSCCCEEECCSSCCCCC-GGGGGC-
T ss_pred ---ccCCchhheeeccCCccccc-ccc-------------------------c--CCCCCEEECCCCCCCCC-hhhccC-
Confidence 22334556666666655421 111 1 13455555555555432 111111
Q ss_pred cccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCC
Q 042075 325 RLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVK 404 (1033)
Q Consensus 325 ~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~ 404 (1033)
++|+.|+|++|.+++..|..|.++++
T Consensus 254 ------------------------------------------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 254 ------------------------------------------------------PGLVEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp ------------------------------------------------------TTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred ------------------------------------------------------CCCCEEECCCCccCCCCHHHhcCccC
Confidence 34555566666666666666666777
Q ss_pred CCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccccCCCCCCccCCCCcccEEecCC
Q 042075 405 LLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSN 483 (1033)
Q Consensus 405 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 483 (1033)
|++|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..++ |+.|+|++|.+++. | +..+++|+.|++++
T Consensus 280 L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 280 LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSH 354 (597)
T ss_dssp CCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCS
T ss_pred CCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeC
Confidence 7777777777764 4555566677777777777766 4555555554 66666666666543 2 55667777888888
Q ss_pred CccCC
Q 042075 484 NNLTG 488 (1033)
Q Consensus 484 N~l~~ 488 (1033)
|.+++
T Consensus 355 N~~~~ 359 (597)
T 3oja_B 355 NDWDC 359 (597)
T ss_dssp SCEEH
T ss_pred CCCCC
Confidence 77763
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.2e-32 Score=306.83 Aligned_cols=267 Identities=22% Similarity=0.289 Sum_probs=146.4
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeee
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSV 187 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 187 (1033)
++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 45555666655555444555555555555555555555555555555555555555555555 4444443 45555555
Q ss_pred cccccCCCCCCCCCCCCCCcEEEcccCcCC--CcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcccc
Q 042075 188 SYNNLTGSIPPSFGNLSSISFLFLSRNNLD--GSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQ 265 (1033)
Q Consensus 188 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 265 (1033)
++|++++..+..|.++++|++|++++|.++ +..|..|..+ +|++|++++|++++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~----------------------- 186 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG----------------------- 186 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-----------------------
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-----------------------
Confidence 555555444444555555555555555553 2344444444 44444444444442
Q ss_pred CccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccch
Q 042075 266 GVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLN 345 (1033)
Q Consensus 266 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 345 (1033)
+|..++ ++|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 187 --l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~------------------------------ 231 (332)
T 2ft3_A 187 --IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM------------------------------ 231 (332)
T ss_dssp --CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC------------------------------
T ss_pred --cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc------------------------------
Confidence 333222 456666666666666656666666666666666665553
Q ss_pred hhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhc
Q 042075 346 FLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGE 425 (1033)
Q Consensus 346 ~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 425 (1033)
..+..|..+++|++|++++|+++ .+|..+..
T Consensus 232 ------------------------------------------------~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 232 ------------------------------------------------IENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp ------------------------------------------------CCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred ------------------------------------------------CChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 33334455555555555555555 45555556
Q ss_pred CCCCcEEEccccccccccCcccccc-------eeceeeccccccC--CCCCCccCCCCcccEEecCCCc
Q 042075 426 LQNLRELRLQENRFLGNIPPSIGNL-------KLFNLQLSYNFLQ--GSIPSSLGQSETLTIIDLSNNN 485 (1033)
Q Consensus 426 l~~L~~L~L~~N~l~~~~p~~~~~l-------~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 485 (1033)
+++|+.|+|++|++++..+..|... .++.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 6666666666666655444444332 1556666666665 5566777777778888877774
No 293
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.1e-32 Score=309.21 Aligned_cols=306 Identities=23% Similarity=0.363 Sum_probs=190.8
Q ss_pred cccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCcee
Q 042075 176 LGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSIT 255 (1033)
Q Consensus 176 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 255 (1033)
+..+++|++|++++|.++ .+|. +..+++|++|++++|++++. +. |..+++|++|++++|++++ +| .+.+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~----- 108 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQN----- 108 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTT-----
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcC-----
Confidence 345666666666666665 3332 55666666666666666633 22 5556666666666665553 22 2333
Q ss_pred EEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCc
Q 042075 256 VFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNS 335 (1033)
Q Consensus 256 ~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~ 335 (1033)
+++|++|++++|++++. +. +..+++|++|++++|.....++.+..+
T Consensus 109 --------------------l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l------------ 154 (347)
T 4fmz_A 109 --------------------LTNLRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSPLSNM------------ 154 (347)
T ss_dssp --------------------CTTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGGGTTC------------
T ss_pred --------------------CCcCCEEECcCCcccCc-hh-hccCCceeEEECCCCCCcccccchhhC------------
Confidence 34444444444444422 22 445555555555555433222222211
Q ss_pred CCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcc
Q 042075 336 LGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRL 415 (1033)
Q Consensus 336 l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l 415 (1033)
++|+.|++++|.+.+..+ +..+++|++|++++|++
T Consensus 155 -------------------------------------------~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 155 -------------------------------------------TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp -------------------------------------------TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred -------------------------------------------CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 345555555555554333 66777788888888887
Q ss_pred cccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccc
Q 042075 416 SGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQL 494 (1033)
Q Consensus 416 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 494 (1033)
.+..+ +..+++|+.|++++|.+.+..+ +..++ |++|++++|.+++..+ +..+++|++|++++|+++
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~------- 256 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS------- 256 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-------
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccC-------
Confidence 74433 7777788888888877774433 44444 6666666666653332 555555555555555554
Q ss_pred cCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCC
Q 042075 495 LGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLS 574 (1033)
Q Consensus 495 ~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 574 (1033)
+ + +.+..+++|+.|++++|++++. +.+..+++|++|++++|++++..|..++.+++|+
T Consensus 257 ------------------~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 257 ------------------D-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp ------------------C-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred ------------------C-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 2 1 2456678888899999888853 4588888999999999999888888889999999
Q ss_pred ccccccccccccCCcccccccccceeecCCCcCc
Q 042075 575 VLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFE 608 (1033)
Q Consensus 575 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 608 (1033)
.|+|++|++++..| +..+++|++|++++|+|+
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999987666 788899999999999875
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.6e-34 Score=320.43 Aligned_cols=196 Identities=19% Similarity=0.192 Sum_probs=160.0
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccC--------chhHHHHHHHHHHHHhcC---------CCCcee
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLH--------HGAFKSFIAECNTLKNIR---------HRNLVK 772 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 772 (1033)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|+.++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 45789999999999999999998 57999999997542 223477899999999886 666666
Q ss_pred Eeeeeccc-------------------------cccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHH
Q 042075 773 ILTACSGV-------------------------DYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLD 827 (1033)
Q Consensus 773 l~~~~~~~-------------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~ 827 (1033)
+.+++... ++..++..|+||||+++|++.+.+.+ ..+++.++..
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----------~~~~~~~~~~ 165 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----------KLSSLATAKS 165 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----------TCCCHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----------cCCCHHHHHH
Confidence 66543210 01135689999999999977766621 3579999999
Q ss_pred HHHHHHHHHHHHH-hCCCCCcEeccCCCCCeEecCCC--------------------cEEEeecccceecCCCCcccccc
Q 042075 828 IGIDVACALSYLH-HDCQPPIVHCDLKPSNVLLDEEM--------------------IAHVGDFGLATFLPLSHAQTSSI 886 (1033)
Q Consensus 828 i~~qi~~~L~~LH-~~~~~~ivHrDlkp~NIll~~~~--------------------~~kL~DfG~a~~~~~~~~~~~~~ 886 (1033)
++.||+.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 166 i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------- 235 (336)
T 2vuw_A 166 ILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------
T ss_pred HHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------
Confidence 9999999999999 88 999999999999999887 8999999999876432
Q ss_pred ccccccccccccccCCCCCCcccchHHHHHH-HHHHHhCCCCCC
Q 042075 887 FAKGSIGYIAPEYGLGSEVSINGDVYSYGIL-LLELVTRKKPTD 929 (1033)
Q Consensus 887 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~v-l~elltg~~p~~ 929 (1033)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 234999999999998766 899999998777 788999999974
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.1e-32 Score=302.98 Aligned_cols=178 Identities=22% Similarity=0.331 Sum_probs=92.6
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeee
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSV 187 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 187 (1033)
+.|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45666666666666555555666666666666666666555666666666666666666665 4444433 45555555
Q ss_pred cccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCc
Q 042075 188 SYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGV 267 (1033)
Q Consensus 188 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 267 (1033)
++|++++..+..|.++++|++|++++|.++. .+..+..+.++++|+.|++++|.++ .
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~~~~~~~l~~L~~L~l~~n~l~-~ 185 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGIENGAFQGMKKLSYIRIADTNIT-T 185 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGBCTTGGGGCTTCCEEECCSSCCC-S
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCcChhhccCCCCcCEEECCCCccc-c
Confidence 5555554444444555555555555555432 0133333444444444444444443 2
Q ss_pred cCccccccccccceeeecccccCCCCCccCcCCCCcccccccccccc
Q 042075 268 IPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLT 314 (1033)
Q Consensus 268 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (1033)
+|..++ ++|++|++++|++++..|..+..+++|++|++++|+++
T Consensus 186 l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 229 (330)
T 1xku_A 186 IPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229 (330)
T ss_dssp CCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred CCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence 333221 45555566666555555555555555555555444444
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.9e-31 Score=299.19 Aligned_cols=236 Identities=25% Similarity=0.394 Sum_probs=192.6
Q ss_pred cceeeeEecCCC--------CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccC
Q 042075 71 CQWHGVTCSRRQ--------HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNN 142 (1033)
Q Consensus 71 c~w~gv~C~~~~--------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 142 (1033)
|+|+.+.|+... ...++.|+++++++++..+..+.++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 799999997532 236889999999999877789999999999999999999888999999999999999999
Q ss_pred CCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccC--CCCCCCCCCCCCCcEEEcccCcCCCcC
Q 042075 143 SIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLT--GSIPPSFGNLSSISFLFLSRNNLDGSI 220 (1033)
Q Consensus 143 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~ 220 (1033)
.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..|..+ +|++|++++|++++ +
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l 187 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-I 187 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-C
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-c
Confidence 998 7887776 89999999999999766677999999999999999996 4778889888 99999999999995 6
Q ss_pred CccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCC
Q 042075 221 PDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNA 300 (1033)
Q Consensus 221 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 300 (1033)
|..+. ++|++|+|++|++++..|..+.++++|+.|++++|++++..+ ..+..+++|++|+|++|+++ .+|..+..+
T Consensus 188 ~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 188 PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIEN-GSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCT-TGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCCh-hHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 66554 789999999999998777788877777777777777764333 23335666666666666666 455556666
Q ss_pred CCccccccccccccC
Q 042075 301 SNLEVFQVNSNKLTG 315 (1033)
Q Consensus 301 ~~L~~L~Ls~N~l~~ 315 (1033)
++|++|++++|++++
T Consensus 264 ~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 264 KLLQVVYLHTNNITK 278 (332)
T ss_dssp TTCCEEECCSSCCCB
T ss_pred ccCCEEECCCCCCCc
Confidence 666666666665553
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=6.9e-31 Score=294.38 Aligned_cols=294 Identities=18% Similarity=0.278 Sum_probs=188.4
Q ss_pred cccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEE
Q 042075 131 LRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLF 210 (1033)
Q Consensus 131 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 210 (1033)
..+|++++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 346888888888887 6776654 5788888888888866666788888888888888888877788888888888888
Q ss_pred cccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccC
Q 042075 211 LSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLT 290 (1033)
Q Consensus 211 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~ 290 (1033)
|++|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.+.. .
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~ 160 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS-----------------------S 160 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG-----------------------G
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc-----------------------c
Confidence 8888887 4555443 577777777777775555555555555555555555531 1
Q ss_pred CCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCC
Q 042075 291 GAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLL 370 (1033)
Q Consensus 291 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~i 370 (1033)
+..+..+..+++|++|++++|+++..+.
T Consensus 161 ~~~~~~~~~l~~L~~L~l~~n~l~~l~~---------------------------------------------------- 188 (330)
T 1xku_A 161 GIENGAFQGMKKLSYIRIADTNITTIPQ---------------------------------------------------- 188 (330)
T ss_dssp GBCTTGGGGCTTCCEEECCSSCCCSCCS----------------------------------------------------
T ss_pred CcChhhccCCCCcCEEECCCCccccCCc----------------------------------------------------
Confidence 1334445555555555555555542211
Q ss_pred ccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccc
Q 042075 371 PACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNL 450 (1033)
Q Consensus 371 p~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 450 (1033)
.+ .++|+.|++++|++++..|..|.++++|++|++++|++++..+..+..+++|++|+|++|+++ .+|..+..+
T Consensus 189 --~~---~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 189 --GL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp --SC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred --cc---cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 11 135666777777777666777777777777777777777666667777777777777777776 555555555
Q ss_pred e-eceeeccccccCCCCCCccCCC------CcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCcccccc
Q 042075 451 K-LFNLQLSYNFLQGSIPSSLGQS------ETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLK 523 (1033)
Q Consensus 451 ~-L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~ 523 (1033)
+ |++|+|++|+|++..+..|... +.|+.|++++|.+.. ....|..|..+.
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~-----------------------~~i~~~~f~~~~ 319 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY-----------------------WEIQPSTFRCVY 319 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG-----------------------GGSCGGGGTTCC
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc-----------------------cccCcccccccc
Confidence 4 5555555555555444444322 445555555555431 013455677777
Q ss_pred ccceEEccccc
Q 042075 524 NLEMLNVFENK 534 (1033)
Q Consensus 524 ~L~~L~Ls~N~ 534 (1033)
+++.++|++|+
T Consensus 320 ~l~~l~L~~N~ 330 (330)
T 1xku_A 320 VRAAVQLGNYK 330 (330)
T ss_dssp CGGGEEC----
T ss_pred ceeEEEecccC
Confidence 77777777774
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=301.66 Aligned_cols=291 Identities=21% Similarity=0.228 Sum_probs=221.1
Q ss_pred CCCCCCCCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccC
Q 042075 63 SWNESIHFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNN 142 (1033)
Q Consensus 63 ~W~~~~~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 142 (1033)
.|.....+|.|.|+ |+- ++++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 22 ~~~~~~~~C~~~~~-c~~-----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG-----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp -----CCEECTTSE-EEC-----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCccCCCCCCCeE-eeC-----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 34445578999988 753 344555 4566554 58999999999999766668999999999999999
Q ss_pred CCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCC-CCCCCCCCCcEEEcccC-cCCCcC
Q 042075 143 SIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIP-PSFGNLSSISFLFLSRN-NLDGSI 220 (1033)
Q Consensus 143 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~ 220 (1033)
.+++..|..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|++++| .+++..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 87 GINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred ccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccC
Confidence 9998888899999999999999999995555558999999999999999995444 47899999999999999 577777
Q ss_pred CccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCC
Q 042075 221 PDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNA 300 (1033)
Q Consensus 221 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 300 (1033)
+..|+.+++|++|++++|++++..|..+.++++|++|++++|.++ .+|..++..+++|++|++++|++++..+..+...
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 245 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG 245 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC-----
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccc
Confidence 889999999999999999999888999999999999999999886 5665555557777777777777775443322210
Q ss_pred CCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCc
Q 042075 301 SNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTT 380 (1033)
Q Consensus 301 ~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~ 380 (1033)
. . .+.
T Consensus 246 ~--------------------~-------------------------------------------------------~~~ 250 (353)
T 2z80_A 246 E--------------------T-------------------------------------------------------NSL 250 (353)
T ss_dssp ---------------------C-------------------------------------------------------CCC
T ss_pred c--------------------c-------------------------------------------------------cch
Confidence 0 0 022
Q ss_pred ccEEEccCCCCCc----cCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccC
Q 042075 381 LEVLLLDSNKIFG----NIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIP 444 (1033)
Q Consensus 381 L~~L~L~~N~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 444 (1033)
++.++++++.+++ .+|..+.++++|++|++++|+++...+..|..+++|++|+|++|.+.+..|
T Consensus 251 l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 3344444444443 356778888888888888888884433346888889999998888886544
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.7e-35 Score=348.48 Aligned_cols=395 Identities=20% Similarity=0.147 Sum_probs=209.3
Q ss_pred CCCCEEEecCCCccccCCcc-ccccccccEEecccCCCCC----CCCccccCCCCCcEEEcccccccCCCCCCcc-ccc-
Q 042075 108 SFLKVLDLHNNSFHHEIPSE-FDRLRRLQVLALHNNSIGG----EIPANISSCSNLIRVRLSSNELVGKIPSELG-SLS- 180 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~- 180 (1033)
++|++|||++|+++...... +..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34556666666665432222 5556666666666666653 2345555666666666666666543222222 233
Q ss_pred ---ccceeeecccccCC----CCCCCCCCCCCCcEEEcccCcCCCcCCccccc-----cCCCCcccccccccCCC----C
Q 042075 181 ---KIEYFSVSYNNLTG----SIPPSFGNLSSISFLFLSRNNLDGSIPDTFGW-----LKNLVNLTMAQNRLSGT----I 244 (1033)
Q Consensus 181 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~ 244 (1033)
+|++|+|++|+++. .+|..|.++++|++|+|++|.+++..+..+.. .++|++|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666663 34555666666777777776665433333322 34566667766666653 2
Q ss_pred cccccCCCceeEEeccCccccCccCccccc----cccccceeeecccccCCC----CCccCcCCCCccccccccccccCc
Q 042075 245 PSSIFNISSITVFDAGINQIQGVIPLDIGF----TLQNLQFFSVGRNQLTGA----IPPAISNASNLEVFQVNSNKLTGE 316 (1033)
Q Consensus 245 p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 316 (1033)
+..+..+++|++|++++|.+....+..+.. ..++|++|+|++|.+++. ++..+..+++|+.|++++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 444555566666666666665333322221 133666666666666542 344445555555555555555421
Q ss_pred CcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCcc--
Q 042075 317 VPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGN-- 394 (1033)
Q Consensus 317 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~-- 394 (1033)
... . ++..+....++|+.|++++|.+++.
T Consensus 243 ~~~--------------------------~-----------------------l~~~~~~~~~~L~~L~L~~n~l~~~~~ 273 (461)
T 1z7x_W 243 GMA--------------------------E-----------------------LCPGLLHPSSRLRTLWIWECGITAKGC 273 (461)
T ss_dssp HHH--------------------------H-----------------------HHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred HHH--------------------------H-----------------------HHHHHhcCCCCceEEECcCCCCCHHHH
Confidence 000 0 0000000013444555555554432
Q ss_pred --CCccccCCCCCCEEEcccCcccccCChhhhcC-----CCCcEEEccccccccccCcccccceeceeeccccccCCCCC
Q 042075 395 --IPAAFGKFVKLLRLEMWNNRLSGTIPPAIGEL-----QNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIP 467 (1033)
Q Consensus 395 --~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p 467 (1033)
++..+.++++|++|++++|.++...+..+... ++|++|+|++|.+++.... .++
T Consensus 274 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-------------------~l~ 334 (461)
T 1z7x_W 274 GDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS-------------------HFS 334 (461)
T ss_dssp HHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH-------------------HHH
T ss_pred HHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHH-------------------HHH
Confidence 33444445555555555555543333333221 3444444444444321100 134
Q ss_pred CccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccc-cccccceEEcccccccc----ccCcc
Q 042075 468 SSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVG-NLKNLEMLNVFENKLRG----EIPRT 542 (1033)
Q Consensus 468 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~----~~p~~ 542 (1033)
..+..+++|++|++++|++++..+..+. ..+. ..++|+.|+|++|++++ .+|..
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~---------------------~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 393 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELC---------------------QGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 393 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHH---------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred HHHhhCCCccEEEccCCccccccHHHHH---------------------HHHcCCCCceEEEECCCCCCChhhHHHHHHH
Confidence 4556667888888888877632111110 0111 14678888999998886 67888
Q ss_pred cccccccceeecccccccCccccccc-----CcccCCccccccccccccCCccc
Q 042075 543 LGSCIKLELLQMQGNFLQGPIPSSLS-----SLRGLSVLDLSQNNLSGKIPEFL 591 (1033)
Q Consensus 543 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~p~~~ 591 (1033)
+..+++|++|+|++|++++.-...+. ...+|+.|++.+|.+....++.+
T Consensus 394 l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~l 447 (461)
T 1z7x_W 394 LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 447 (461)
T ss_dssp HHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred HHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHHH
Confidence 88888999999999988754222221 12356667666666665444443
No 300
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.7e-34 Score=338.28 Aligned_cols=358 Identities=19% Similarity=0.146 Sum_probs=199.2
Q ss_pred CCcEEEcccCcCCCcCCcc-ccccCCCCcccccccccCC----CCcccccCCCceeEEeccCccccCccCcccccccc--
Q 042075 205 SISFLFLSRNNLDGSIPDT-FGWLKNLVNLTMAQNRLSG----TIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQ-- 277 (1033)
Q Consensus 205 ~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~-- 277 (1033)
+|++|+|++|+++...... |..+++|++|+|++|++++ .++..+..+++|++|++++|.+....+..++..+.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 4455555555554322222 4455555555555555543 23445555566666666666665443433443444
Q ss_pred --ccceeeecccccCC----CCCccCcCCCCccccccccccccCcCc-chhh-----hccccceeeecCcCCCCCCccch
Q 042075 278 --NLQFFSVGRNQLTG----AIPPAISNASNLEVFQVNSNKLTGEVP-YLEK-----LQRLSHFVITRNSLGSGEHRDLN 345 (1033)
Q Consensus 278 --~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~-----l~~L~~L~l~~N~l~~~~~~~~~ 345 (1033)
+|++|+|++|+++. .++..+..+++|++|++++|++++..+ .+.. ..+|++|++++|.++.....
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--- 160 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE--- 160 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH---
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH---
Confidence 57788888887773 457778888888888888888765322 1211 12344444444433221100
Q ss_pred hhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccC-----CCCCCEEEcccCccccc--
Q 042075 346 FLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGK-----FVKLLRLEMWNNRLSGT-- 418 (1033)
Q Consensus 346 ~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~-----l~~L~~L~L~~N~l~~~-- 418 (1033)
.++..+.. .++|+.|++++|.++...+..+.. .++|++|++++|+++..
T Consensus 161 -----------------------~l~~~l~~-~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 216 (461)
T 1z7x_W 161 -----------------------PLASVLRA-KPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC 216 (461)
T ss_dssp -----------------------HHHHHHHH-CTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH
T ss_pred -----------------------HHHHHHhh-CCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH
Confidence 01222222 257788888888876554444432 55788888888887753
Q ss_pred --CChhhhcCCCCcEEEcccccccccc-----Ccccccce-eceeeccccccCCC----CCCccCCCCcccEEecCCCcc
Q 042075 419 --IPPAIGELQNLRELRLQENRFLGNI-----PPSIGNLK-LFNLQLSYNFLQGS----IPSSLGQSETLTIIDLSNNNL 486 (1033)
Q Consensus 419 --~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~-L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l 486 (1033)
++..+..+++|++|+|++|++.+.. +..+..++ |++|+|++|.+++. ++..+..+++|++|++++|++
T Consensus 217 ~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 296 (461)
T 1z7x_W 217 RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCC
T ss_pred HHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCC
Confidence 4666777788888888888776532 22222343 77777777777643 455566667777777777766
Q ss_pred CCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccc----cCcccccccccceeecccccccCc
Q 042075 487 TGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGE----IPRTLGSCIKLELLQMQGNFLQGP 562 (1033)
Q Consensus 487 ~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 562 (1033)
++..+..+.... ....++|+.|+|++|.+++. +|..+..+++|++|+|++|++++.
T Consensus 297 ~~~~~~~l~~~l--------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 297 GDEGARLLCETL--------------------LEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHHHHHHHH--------------------TSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred chHHHHHHHHHh--------------------ccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 532211111100 00113556666666666543 344455556666666666666544
Q ss_pred ccccccC-----cccCCccccccccccc----cCCcccccccccceeecCCCcCcc
Q 042075 563 IPSSLSS-----LRGLSVLDLSQNNLSG----KIPEFLVGFQLLEYLNLSNNDFEG 609 (1033)
Q Consensus 563 ~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~g 609 (1033)
.+..+.. .++|+.|+|++|++++ .+|..+..+++|++|++++|++++
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 4443332 4566666666666654 555556666666666666666554
No 301
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.5e-29 Score=301.53 Aligned_cols=296 Identities=21% Similarity=0.333 Sum_probs=182.4
Q ss_pred CCCCCCCCCCCCCCCcceeeeEecCC-----CCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccc
Q 042075 56 DPLGVFGSWNESIHFCQWHGVTCSRR-----QHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDR 130 (1033)
Q Consensus 56 ~~~~~~~~W~~~~~~c~w~gv~C~~~-----~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 130 (1033)
|....+++|....+||.|+|..|.-. ....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .
T Consensus 7 ~~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~ 79 (622)
T 3g06_A 7 EYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L 79 (622)
T ss_dssp ---CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C
T ss_pred HHHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c
Confidence 33455678877788999977533210 0123667777777777 5666554 67777777777777 4555 4
Q ss_pred cccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEE
Q 042075 131 LRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLF 210 (1033)
Q Consensus 131 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 210 (1033)
+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|++|++++|++++ +|.. +++|++|+
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 567777777777776 4555 56777777777777763 444 45667777777777763 4443 36677777
Q ss_pred cccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccC
Q 042075 211 LSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLT 290 (1033)
Q Consensus 211 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~ 290 (1033)
|++|++++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.|++ +|. .+++|+.|++++|.++
T Consensus 148 Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~----~~~~L~~L~L~~N~l~ 214 (622)
T 3g06_A 148 VSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLT 214 (622)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCS
T ss_pred CcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC----ccchhhEEECcCCccc
Confidence 77777764 343 23556666677776663 44 334555666666665553 332 1345555555555555
Q ss_pred CCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCC
Q 042075 291 GAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLL 370 (1033)
Q Consensus 291 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~i 370 (1033)
. +|.. +++|+.|++++|+|++ +
T Consensus 215 ~-l~~~---~~~L~~L~Ls~N~L~~------------------------------------------------------l 236 (622)
T 3g06_A 215 S-LPAL---PSGLKELIVSGNRLTS------------------------------------------------------L 236 (622)
T ss_dssp S-CCCC---CTTCCEEECCSSCCSC------------------------------------------------------C
T ss_pred c-cCCC---CCCCCEEEccCCccCc------------------------------------------------------C
Confidence 2 2221 2344444444444442 1
Q ss_pred ccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccc
Q 042075 371 PACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNL 450 (1033)
Q Consensus 371 p~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 450 (1033)
| ...++|+.|++++|+|+. +|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++.+|..+..+
T Consensus 237 p----~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 237 P----VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp C----CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred C----CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 1 112467777777777774 443 5677888888888888 667788888888888888888887777766554
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-29 Score=278.72 Aligned_cols=246 Identities=21% Similarity=0.255 Sum_probs=185.5
Q ss_pred CcceeeeEecCCC--------CCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccc--cCCccccccccccEEec
Q 042075 70 FCQWHGVTCSRRQ--------HQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHH--EIPSEFDRLRRLQVLAL 139 (1033)
Q Consensus 70 ~c~w~gv~C~~~~--------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L 139 (1033)
.|.|.+|.|+..+ ...++.|+|++++++...+..+.++++|++|+|++|+++. .+|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 4899999998642 2357778888888774333456788888888888888763 34666777788888888
Q ss_pred ccCCCCCCCCccccCCCCCcEEEcccccccCCCC-CCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCC
Q 042075 140 HNNSIGGEIPANISSCSNLIRVRLSSNELVGKIP-SELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDG 218 (1033)
Q Consensus 140 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 218 (1033)
++|.++ .+|..+.++++|++|++++|++++..+ ..+..+++|++|++++|++++..|..|.++++|++|+|++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 888887 567777788888888888888875544 567788888888888888887777778888888888888888875
Q ss_pred -cCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccC
Q 042075 219 -SIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAI 297 (1033)
Q Consensus 219 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 297 (1033)
.+|..|..+++|++|+|++|++++..|..+.++++|+.|++++|++++. +...+..+++|++|+|++|++++..|..+
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL-DTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC-CSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc-ChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 5677788888888888888888877777788888888888888888743 33334567788888888888887777777
Q ss_pred cCCC-CccccccccccccCcC
Q 042075 298 SNAS-NLEVFQVNSNKLTGEV 317 (1033)
Q Consensus 298 ~~l~-~L~~L~Ls~N~l~~~~ 317 (1033)
..++ +|++|++++|++++..
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSG
T ss_pred HhhhccCCEEEccCCCeeccc
Confidence 7774 7888888888887653
No 303
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=6.2e-31 Score=291.92 Aligned_cols=269 Identities=15% Similarity=0.163 Sum_probs=222.3
Q ss_pred CCCCCCCCCCCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCc-cccCCcccc-------cc
Q 042075 60 VFGSWNESIHFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSF-HHEIPSEFD-------RL 131 (1033)
Q Consensus 60 ~~~~W~~~~~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l 131 (1033)
...+|.....|+.|..+..... ..+++.+++.++.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++
T Consensus 20 ~~~~~~~~~~c~~~~~~~~~~~-~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l 94 (312)
T 1wwl_A 20 PKPDWSSAFNCLGAADVELYGG-GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGI 94 (312)
T ss_dssp SSCCGGGGGGSSSCSEEEEEEE-EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTT
T ss_pred cccchHHHhhhhccccEEEEcc-CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCc
Confidence 3557876667877776544322 23577788888888 677666554 89999999999 557887776 79
Q ss_pred ccccEEecccCCCCCCCCccc--cCCCCCcEEEcccccccCCCCCCcccc-----cccceeeecccccCCCCCCCCCCCC
Q 042075 132 RRLQVLALHNNSIGGEIPANI--SSCSNLIRVRLSSNELVGKIPSELGSL-----SKIEYFSVSYNNLTGSIPPSFGNLS 204 (1033)
Q Consensus 132 ~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~ 204 (1033)
++|++|+|++|.+++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 999999999999999999987 8999999999999999976 8888888 8999999999999988889999999
Q ss_pred CCcEEEcccCcCCCc--CCccc--cccCCCCcccccccccCC--CCc-ccccCCCceeEEeccCccccCccCcccccccc
Q 042075 205 SISFLFLSRNNLDGS--IPDTF--GWLKNLVNLTMAQNRLSG--TIP-SSIFNISSITVFDAGINQIQGVIPLDIGFTLQ 277 (1033)
Q Consensus 205 ~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p-~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~ 277 (1033)
+|++|+|++|++.+. .|..+ +.+++|++|+|++|++++ .++ ..+.++++|++|++++|++++.+|...+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 999999999998765 33344 889999999999999983 223 33457899999999999999888766666789
Q ss_pred ccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCC
Q 042075 278 NLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGS 338 (1033)
Q Consensus 278 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~ 338 (1033)
+|++|+|++|+|+ .+|..+. ++|++|++++|+|++. |.+..+++|++|++++|.++.
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 9999999999999 7787776 8899999999999987 448888888888888888764
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8.6e-31 Score=290.79 Aligned_cols=206 Identities=16% Similarity=0.210 Sum_probs=127.4
Q ss_pred cCCCCCCCEEEecCCCccccCCccccccccccEEecccCCC-CCCCCcccc-------CCCCCcEEEcccccccCCCCCC
Q 042075 104 VGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSI-GGEIPANIS-------SCSNLIRVRLSSNELVGKIPSE 175 (1033)
Q Consensus 104 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~ 175 (1033)
++..++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44556677777777777 667666554 77777777777 345666555 6777777777777777777766
Q ss_pred c--ccccccceeeecccccCCCCCCCCCCC-----CCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCC--Ccc
Q 042075 176 L--GSLSKIEYFSVSYNNLTGSIPPSFGNL-----SSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT--IPS 246 (1033)
Q Consensus 176 ~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~ 246 (1033)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|+.|+.+++|++|+|++|++.+. +|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 6777777777777777765 6666655 6777777777777766667777777777777777776654 233
Q ss_pred cc--cCCCceeEEeccCccccC--ccCccccccccccceeeecccccCCCCC-ccCcCCCCcccccccccccc
Q 042075 247 SI--FNISSITVFDAGINQIQG--VIPLDIGFTLQNLQFFSVGRNQLTGAIP-PAISNASNLEVFQVNSNKLT 314 (1033)
Q Consensus 247 ~l--~~l~~L~~L~ls~N~l~~--~~p~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 314 (1033)
.+ .++++|++|++++|++++ .++..++..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 33 566666666666666652 2233333344555555555555554443 22333444444444444433
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.2e-32 Score=334.89 Aligned_cols=456 Identities=13% Similarity=0.114 Sum_probs=245.8
Q ss_pred CCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCc---cccCCcccc------------cccc
Q 042075 69 HFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSF---HHEIPSEFD------------RLRR 133 (1033)
Q Consensus 69 ~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~ 133 (1033)
-|++|.++.+... .++ .+.. ......+..+..+++|++|+|+++.. .+.+|..++ .+++
T Consensus 40 vck~W~~~~~~~~--~~l---~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 113 (592)
T 3ogk_B 40 VCRRWFKIDSETR--EHV---TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQ 113 (592)
T ss_dssp SCHHHHHHHHHHC--CEE---EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HhHHHHHhhhccc--cEE---EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCC
Confidence 3558999965432 122 2221 12223344556788899999988532 234554443 6788
Q ss_pred ccEEecccCCCCCCCCccccCC--CCCcEEEccccc-ccC-CCCCCcccccccceeeecccccCCC----CCCCCCCCCC
Q 042075 134 LQVLALHNNSIGGEIPANISSC--SNLIRVRLSSNE-LVG-KIPSELGSLSKIEYFSVSYNNLTGS----IPPSFGNLSS 205 (1033)
Q Consensus 134 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~ 205 (1033)
|++|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++
T Consensus 114 L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~ 193 (592)
T 3ogk_B 114 LKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTS 193 (592)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCC
T ss_pred CCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCC
Confidence 8888888888876666666653 448888888876 211 1222234677888888888887655 2223446677
Q ss_pred CcEEEcccCcCCC----cCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcccc---CccCccccccccc
Q 042075 206 ISFLFLSRNNLDG----SIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQ---GVIPLDIGFTLQN 278 (1033)
Q Consensus 206 L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~---~~~p~~~~~~l~~ 278 (1033)
|++|+|++|.+++ .++..+..+++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+.. ...+++
T Consensus 194 L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~-l~~~~~ 271 (592)
T 3ogk_B 194 LEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMN-LVFPRK 271 (592)
T ss_dssp CCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSC-CCCCTT
T ss_pred ccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHH-hhcccc
Confidence 8888888888763 334445567777777777777774 5666777777777777643221 011111 123445
Q ss_pred cceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcce
Q 042075 279 LQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKW 358 (1033)
Q Consensus 279 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~ 358 (1033)
|+.|+++++.. +.+|..+..+++|++|++++|.+++.... ..+..+++|+.
T Consensus 272 L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~----------------------------~~~~~~~~L~~ 322 (592)
T 3ogk_B 272 LCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHC----------------------------TLIQKCPNLEV 322 (592)
T ss_dssp CCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHH----------------------------HHHTTCTTCCE
T ss_pred ccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHH----------------------------HHHHhCcCCCE
Confidence 55555554322 23444444555555555555554322110 01222333333
Q ss_pred eeecccccCCCCccccccccCcccEEEcc-----------CCCCCccC-CccccCCCCCCEEEcccCcccccCChhhhc-
Q 042075 359 FHININNFGGLLPACISNFSTTLEVLLLD-----------SNKIFGNI-PAAFGKFVKLLRLEMWNNRLSGTIPPAIGE- 425 (1033)
Q Consensus 359 l~l~~n~l~~~ip~~~~~~~~~L~~L~L~-----------~N~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~- 425 (1033)
|+++ +++.......+....++|+.|+++ .|.+++.. +..+..+++|++|+++.|++++..+..+..
T Consensus 323 L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~ 401 (592)
T 3ogk_B 323 LETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTY 401 (592)
T ss_dssp EEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHH
T ss_pred Eecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhh
Confidence 3333 111111111111112334444444 13333221 111223444444444444444333333333
Q ss_pred CCCCcEEEccccccccccCcccccceeceeeccccccCCC-----CCCccCCCCcccEEecCCCc--cCCCCCccccCch
Q 042075 426 LQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGS-----IPSSLGQSETLTIIDLSNNN--LTGTIPPQLLGLS 498 (1033)
Q Consensus 426 l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~~~ 498 (1033)
+++|+.|+|+.+. ..|.+++. ++..+.++++|+.|++++|. +++.
T Consensus 402 ~~~L~~L~l~~~~-------------------~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~--------- 453 (592)
T 3ogk_B 402 LKNLCDFRLVLLD-------------------REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDL--------- 453 (592)
T ss_dssp CCSCCEEEEEECS-------------------CCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHH---------
T ss_pred CCCCcEEEEeecC-------------------CCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHH---------
Confidence 4444444443110 13344332 22234556777777776533 3311
Q ss_pred hHHhhhhccCccccCCcCCcc-ccccccceEEcccccccc-ccCcccccccccceeecccccccCc-ccccccCcccCCc
Q 042075 499 SLLIVLELSRNQLTGPIPNEV-GNLKNLEMLNVFENKLRG-EIPRTLGSCIKLELLQMQGNFLQGP-IPSSLSSLRGLSV 575 (1033)
Q Consensus 499 ~ll~~L~ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 575 (1033)
.+..+ ..+++|+.|+|++|++++ .++..+.++++|++|+|++|++++. ++..+..+++|+.
T Consensus 454 ----------------~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 517 (592)
T 3ogk_B 454 ----------------GLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRY 517 (592)
T ss_dssp ----------------HHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCE
T ss_pred ----------------HHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCe
Confidence 11111 125678888888888876 3455567788899999999988754 4444567889999
Q ss_pred cccccccccccCCccc-ccccccceeecCCCc
Q 042075 576 LDLSQNNLSGKIPEFL-VGFQLLEYLNLSNND 606 (1033)
Q Consensus 576 L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~ 606 (1033)
|+|++|++++.-...+ ..++.+....+..++
T Consensus 518 L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~~ 549 (592)
T 3ogk_B 518 LWVQGYRASMTGQDLMQMARPYWNIELIPSRR 549 (592)
T ss_dssp EEEESCBCCTTCTTGGGGCCTTEEEEEECCC-
T ss_pred eECcCCcCCHHHHHHHHHhCCCcEEEEecCcc
Confidence 9999999886544334 356777666665543
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.3e-29 Score=275.29 Aligned_cols=258 Identities=24% Similarity=0.260 Sum_probs=222.5
Q ss_pred CcccEEEccCCCCCccCCccccCCCCCCEEEcccCccccc--CChhhhcCCCCcEEEccccccccccCcccccce-ecee
Q 042075 379 TTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGT--IPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNL 455 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L 455 (1033)
++|+.|++++|+++...+..|.++++|++|+|++|+++.. .|..+..+++|++|+|++|.+. .+|..+..++ |++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 5899999999999977777789999999999999999833 4788889999999999999998 5777788887 9999
Q ss_pred eccccccCCCCC-CccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccC-CcCCccccccccceEEcccc
Q 042075 456 QLSYNFLQGSIP-SSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTG-PIPNEVGNLKNLEMLNVFEN 533 (1033)
Q Consensus 456 ~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N 533 (1033)
++++|.+++..+ ..+..+++|++|++++|++++..|..+..+.++ +.|++++|.+++ .+|..+..+++|+.|+|++|
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC-CEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 999999997765 689999999999999999997777777777777 999999999987 68999999999999999999
Q ss_pred ccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCccccccc-ccceeecCCCcCcccCC
Q 042075 534 KLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQ-LLEYLNLSNNDFEGMVP 612 (1033)
Q Consensus 534 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~g~~p 612 (1033)
++++..|..|..+++|++|+|++|++++..+..+..+++|+.|||++|++++..|..+..++ +|++|+|++|++++..+
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 99988899999999999999999999988888899999999999999999999999999985 99999999999999766
Q ss_pred Ccccccccc---cccccccccccCCcccc
Q 042075 613 TEGVFRNAS---ITSVLGNLKLCGGTHEF 638 (1033)
Q Consensus 613 ~~~~~~~~~---~~~~~~n~~lcg~~~~~ 638 (1033)
......+.. ...+..+...|..|...
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred hHHHHHHHHhhhhhhccccccccCCchhh
Confidence 433222222 22233455566655543
No 307
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.6e-29 Score=281.03 Aligned_cols=277 Identities=20% Similarity=0.235 Sum_probs=145.4
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeee
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSV 187 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 187 (1033)
+.....++++|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33344555555555 4454443 25555555555555433335555555555555555555444455555555555555
Q ss_pred cccccCCCCCCCCCCCCCCcEEEcccCcCCCcCC-ccccccCCCCccccccc-ccCCCCcccccCCCceeEEeccCcccc
Q 042075 188 SYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIP-DTFGWLKNLVNLTMAQN-RLSGTIPSSIFNISSITVFDAGINQIQ 265 (1033)
Q Consensus 188 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~ls~N~l~ 265 (1033)
++|++++..+..|+++++|++|+|++|++++..+ ..|..+++|++|++++| .++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~------------------------ 163 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT------------------------ 163 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC------------------------
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc------------------------
Confidence 5555553333334555555555555555553222 24444555555555444 233
Q ss_pred CccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcc-hhhhccccceeeecCcCCCCCCccc
Q 042075 266 GVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPY-LEKLQRLSHFVITRNSLGSGEHRDL 344 (1033)
Q Consensus 266 ~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~l~~N~l~~~~~~~~ 344 (1033)
.++...+..+++|++|++++|++++..|..+..+++|++|++++|+++..++. +..+
T Consensus 164 -~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~--------------------- 221 (353)
T 2z80_A 164 -KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVT--------------------- 221 (353)
T ss_dssp -EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHT---------------------
T ss_pred -ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhc---------------------
Confidence 23223333455566666666666656666677777777777777766533322 1122
Q ss_pred hhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccc---cCCCCCCEEEcccCcccc----
Q 042075 345 NFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAF---GKFVKLLRLEMWNNRLSG---- 417 (1033)
Q Consensus 345 ~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~---~~l~~L~~L~L~~N~l~~---- 417 (1033)
++|+.|++++|.+++..+..+ .....++.+++++|.+++
T Consensus 222 ----------------------------------~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~ 267 (353)
T 2z80_A 222 ----------------------------------SSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267 (353)
T ss_dssp ----------------------------------TTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHH
T ss_pred ----------------------------------ccccEEECCCCccccccccccccccccchhhccccccccccCcchh
Confidence 234444444444443332222 224455666666666553
Q ss_pred cCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCC-ccCCCCcccEEecCCCccCCCCC
Q 042075 418 TIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPS-SLGQSETLTIIDLSNNNLTGTIP 491 (1033)
Q Consensus 418 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p 491 (1033)
.+|.++..+++|+.|+|++|+++ .+|. .|..+++|++|+|++|.+++..|
T Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~------------------------~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 268 QVMKLLNQISGLLELEFSRNQLK------------------------SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHTCTTCCEEECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhHHHHhcccCCCEEECCCCCCC------------------------ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 24455555555555555555544 3333 35788899999999999886543
No 308
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.2e-28 Score=275.02 Aligned_cols=225 Identities=18% Similarity=0.232 Sum_probs=181.9
Q ss_pred CcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeec
Q 042075 379 TTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQL 457 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~L 457 (1033)
+.++.|+|++|.++ .+|..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..++.++ |++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 35666666666665 45556666666666666666666 56666666666666666666666 5666666665 666666
Q ss_pred cccccCCCCCCccC---------CCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceE
Q 042075 458 SYNFLQGSIPSSLG---------QSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEML 528 (1033)
Q Consensus 458 s~N~l~~~~p~~~~---------~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L 528 (1033)
++|++.+.+|..+. ++++|++|+|++|+++ .+|..+..+.++ +.|++++|++++ +|..++.+++|+.|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L-~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL-KSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC-CEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC-CEEEccCCCCCc-CchhhccCCCCCEE
Confidence 66666666666554 4889999999999998 888888888777 889999999985 67789999999999
Q ss_pred EccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCc
Q 042075 529 NVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFE 608 (1033)
Q Consensus 529 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 608 (1033)
+|++|++.+.+|..|+++++|++|+|++|++.+.+|..++++++|+.|+|++|++.+.+|+.+.++++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred c
Q 042075 609 G 609 (1033)
Q Consensus 609 g 609 (1033)
.
T Consensus 315 ~ 315 (328)
T 4fcg_A 315 Q 315 (328)
T ss_dssp C
T ss_pred H
Confidence 3
No 309
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=2.2e-31 Score=323.93 Aligned_cols=414 Identities=13% Similarity=0.057 Sum_probs=268.5
Q ss_pred ccccCCccccccccccEEecccCCC---CCCCCcccc------------CCCCCcEEEcccccccCCCCCCcccc--ccc
Q 042075 120 FHHEIPSEFDRLRRLQVLALHNNSI---GGEIPANIS------------SCSNLIRVRLSSNELVGKIPSELGSL--SKI 182 (1033)
Q Consensus 120 l~~~~p~~~~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L 182 (1033)
+...++..+.++++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+..+ .+|
T Consensus 61 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L 140 (592)
T 3ogk_B 61 YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDL 140 (592)
T ss_dssp GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGC
T ss_pred cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccC
Confidence 3334455667889999999987542 245555444 68889999999998876666666653 449
Q ss_pred ceeeecccc-cCC-CCCCCCCCCCCCcEEEcccCcCCCc----CCccccccCCCCcccccccccCC----CCcccccCCC
Q 042075 183 EYFSVSYNN-LTG-SIPPSFGNLSSISFLFLSRNNLDGS----IPDTFGWLKNLVNLTMAQNRLSG----TIPSSIFNIS 252 (1033)
Q Consensus 183 ~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~ 252 (1033)
++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.+++
T Consensus 141 ~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~ 220 (592)
T 3ogk_B 141 ETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCR 220 (592)
T ss_dssp CEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCT
T ss_pred cEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCC
Confidence 999998886 221 1122233678889999998888765 33345567888888888888873 3444455677
Q ss_pred ceeEEeccCccccCccCccccccccccceeeecccccC---CCCCccCcCCCCccccccccccccCcCcchhhhccccce
Q 042075 253 SITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLT---GAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHF 329 (1033)
Q Consensus 253 ~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L 329 (1033)
+|+.|++++|.+.+ +| ..+..+++|++|+++.+... +..+..+..+++|+.|+++++.....+..+..
T Consensus 221 ~L~~L~L~~~~~~~-l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~------- 291 (592)
T 3ogk_B 221 SLVSVKVGDFEILE-LV-GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPF------- 291 (592)
T ss_dssp TCCEEECSSCBGGG-GH-HHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGG-------
T ss_pred CCcEEeccCccHHH-HH-HHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhh-------
Confidence 78888888877764 44 33445677777777653332 22334455555555555554322211111111
Q ss_pred eeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCC-ccccCCCCCCEE
Q 042075 330 VITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIP-AAFGKFVKLLRL 408 (1033)
Q Consensus 330 ~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L 408 (1033)
.++|+.|++++|.+++... ..+.++++|++|
T Consensus 292 ------------------------------------------------~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L 323 (592)
T 3ogk_B 292 ------------------------------------------------AAQIRKLDLLYALLETEDHCTLIQKCPNLEVL 323 (592)
T ss_dssp ------------------------------------------------GGGCCEEEETTCCCCHHHHHHHHTTCTTCCEE
T ss_pred ------------------------------------------------cCCCcEEecCCCcCCHHHHHHHHHhCcCCCEE
Confidence 2456666666666554333 335677888888
Q ss_pred EcccCcccccCChhhhcCCCCcEEEcc-----------cccccccc-Ccccccce-eceeeccccccCCCCCCccCC-CC
Q 042075 409 EMWNNRLSGTIPPAIGELQNLRELRLQ-----------ENRFLGNI-PPSIGNLK-LFNLQLSYNFLQGSIPSSLGQ-SE 474 (1033)
Q Consensus 409 ~L~~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~~-p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~-l~ 474 (1033)
+++++...+.++..+..+++|++|+|+ .|.+++.. +.....++ |++|+++.|.+++..+..+.. ++
T Consensus 324 ~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~ 403 (592)
T 3ogk_B 324 ETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLK 403 (592)
T ss_dssp EEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCC
T ss_pred eccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCC
Confidence 887433333444455667888888888 35555432 22223344 667777667666655555544 67
Q ss_pred cccEEecC----CCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcccc--ccccccCccccc-cc
Q 042075 475 TLTIIDLS----NNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFEN--KLRGEIPRTLGS-CI 547 (1033)
Q Consensus 475 ~L~~L~Ls----~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~ 547 (1033)
+|+.|+++ .|++++ .|.. . .++..+..+++|+.|+|++| .+++..+..++. ++
T Consensus 404 ~L~~L~l~~~~~~n~l~~-~p~~-----~--------------~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 404 NLCDFRLVLLDREERITD-LPLD-----N--------------GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp SCCEEEEEECSCCSCCSS-CCCH-----H--------------HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred CCcEEEEeecCCCccccC-chHH-----H--------------HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 77777775 555552 2210 0 01223456789999999853 477666666654 88
Q ss_pred ccceeecccccccC-cccccccCcccCCcccccccccccc-CCcccccccccceeecCCCcCccc
Q 042075 548 KLELLQMQGNFLQG-PIPSSLSSLRGLSVLDLSQNNLSGK-IPEFLVGFQLLEYLNLSNNDFEGM 610 (1033)
Q Consensus 548 ~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~ 610 (1033)
+|++|+|++|++++ .++..+..+++|+.|+|++|++++. ++..+..+++|++|+|++|++++.
T Consensus 464 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 464 NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 99999999999986 4566678899999999999999865 445556899999999999999865
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=7.3e-28 Score=281.98 Aligned_cols=247 Identities=19% Similarity=0.221 Sum_probs=126.6
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 190 (1033)
..++.++++++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34444444444 3443332 34455555555554444444455555555555555554444444444555555555555
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCc
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPL 270 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 270 (1033)
++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++ |...+.+|.
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~------------------------~~~l~~i~~ 189 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE------------------------LKKLEYISE 189 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCC------------------------CTTCCEECT
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCC------------------------CCCccccCh
Confidence 54444444444444555555555544443334444444444444444 222223444
Q ss_pred cccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhccc
Q 042075 271 DIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSL 350 (1033)
Q Consensus 271 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l 350 (1033)
..+..+++|++|+|++|++++. | .+..+++|+.|+|++|++++..|.
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~------------------------------- 236 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPG------------------------------- 236 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGG-------------------------------
T ss_pred hhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcc-------------------------------
Confidence 4444455555555555555532 2 355555566666555555533221
Q ss_pred ccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCc
Q 042075 351 TNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLR 430 (1033)
Q Consensus 351 ~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 430 (1033)
.+.. .++|+.|++++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+
T Consensus 237 ----------------------~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 237 ----------------------SFHG-LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp ----------------------GGTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ----------------------cccC-ccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 0000 13455555555556556666667777777777777777766666667777777
Q ss_pred EEEccccccc
Q 042075 431 ELRLQENRFL 440 (1033)
Q Consensus 431 ~L~L~~N~l~ 440 (1033)
.|+|++|.+.
T Consensus 294 ~L~L~~Np~~ 303 (452)
T 3zyi_A 294 ELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCEE
T ss_pred EEEccCCCcC
Confidence 7777777665
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=3.2e-28 Score=266.59 Aligned_cols=235 Identities=23% Similarity=0.227 Sum_probs=145.1
Q ss_pred CCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccc-cCCCCCCccCCCCcccEEe
Q 042075 403 VKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNF-LQGSIPSSLGQSETLTIID 480 (1033)
Q Consensus 403 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 480 (1033)
++|++|++++|++++..+..|..+++|++|+|++|++++..|..|..++ |++|+|++|. +....|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 3455555555555544444455555555555555555544455555544 5555555554 4444455555566666666
Q ss_pred cCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeeccccccc
Q 042075 481 LSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQ 560 (1033)
Q Consensus 481 Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 560 (1033)
+++|++++..|..+..+.++ +.|++++|++++..+..|+.+++|+.|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCC-CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 66666654444444444444 55666666666555555677777777777777777555556777777777777777777
Q ss_pred CcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCcccccccccccccccccccCCcccc
Q 042075 561 GPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVFRNASITSVLGNLKLCGGTHEF 638 (1033)
Q Consensus 561 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lcg~~~~~ 638 (1033)
+..|..+..+++|+.|+|++|++++..|..+..+++|++|++++|++++..+......++.......+...|..|...
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHh
Confidence 777777777777777777777777666666777777777788888777766654444444444444555556555443
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=8.4e-28 Score=280.44 Aligned_cols=233 Identities=24% Similarity=0.245 Sum_probs=200.6
Q ss_pred CcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeec
Q 042075 379 TTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQL 457 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~L 457 (1033)
++++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..++ |++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 5678888888888888888888888899999998888888788888888899999998888866666788887 888999
Q ss_pred cccccCCCCCCccCCCCcccEEecCCCccCCCCCc-cccCchhHHhhhhccCccccCCcCCccccccccceEEccccccc
Q 042075 458 SYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPP-QLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLR 536 (1033)
Q Consensus 458 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 536 (1033)
++|.+++..+..|..+++|++|+|++|+..+.+|. .+.++.++ +.|++++|+++ .+| .+..+++|+.|+|++|+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~ 220 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL-RYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS 220 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSC-CEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccccc-CeecCCCCcCc-ccc-ccCCCcccCEEECCCCccC
Confidence 99988877777888899999999988554445655 45556655 88999999988 455 4888999999999999999
Q ss_pred cccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCc
Q 042075 537 GEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 537 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 614 (1033)
+..|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|+|++..+..+..+++|+.|+|++|++.+...-.
T Consensus 221 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred ccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCch
Confidence 888999999999999999999999988999999999999999999999888888899999999999999999876543
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=276.44 Aligned_cols=235 Identities=22% Similarity=0.258 Sum_probs=151.0
Q ss_pred ccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCccc
Q 042075 99 YISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGS 178 (1033)
Q Consensus 99 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 178 (1033)
.+|..+. +.++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|..
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 134 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVY 134 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCS
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhc
Confidence 4555443 56777788877777766677777777777777777777666667777777777777777777555556777
Q ss_pred ccccceeeecccccCCCCCCCCCCCCCCcEEEcccC-cCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEE
Q 042075 179 LSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRN-NLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVF 257 (1033)
Q Consensus 179 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 257 (1033)
+++|++|+|++|++++..+..|.++++|++|+|++| .+....+..|..+++|++|+|++|+++ .+|. +.
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~-------- 204 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LT-------- 204 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CT--------
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cC--------
Confidence 777777777777777555566777777777777763 344333345555666666655555555 2221 11
Q ss_pred eccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCC
Q 042075 258 DAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLG 337 (1033)
Q Consensus 258 ~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~ 337 (1033)
.+++|++|+|++|++++..|..|..++
T Consensus 205 -----------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~------------------------------------ 231 (440)
T 3zyj_A 205 -----------------PLIKLDELDLSGNHLSAIRPGSFQGLM------------------------------------ 231 (440)
T ss_dssp -----------------TCSSCCEEECTTSCCCEECTTTTTTCT------------------------------------
T ss_pred -----------------CCcccCEEECCCCccCccChhhhccCc------------------------------------
Confidence 233444444444444433344443333
Q ss_pred CCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccc
Q 042075 338 SGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSG 417 (1033)
Q Consensus 338 ~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 417 (1033)
+|+.|++++|+|++..+..|.++++|++|+|++|+|++
T Consensus 232 ------------------------------------------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 232 ------------------------------------------HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ------------------------------------------TCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred ------------------------------------------cCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 34444555555555566677777788888888888887
Q ss_pred cCChhhhcCCCCcEEEccccccc
Q 042075 418 TIPPAIGELQNLRELRLQENRFL 440 (1033)
Q Consensus 418 ~~p~~~~~l~~L~~L~L~~N~l~ 440 (1033)
..+..|..+++|+.|+|++|.+.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEE
T ss_pred cChhHhccccCCCEEEcCCCCcc
Confidence 77777788888888888888776
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.3e-27 Score=279.83 Aligned_cols=248 Identities=20% Similarity=0.214 Sum_probs=193.1
Q ss_pred eeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccc
Q 042075 73 WHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANI 152 (1033)
Q Consensus 73 w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~ 152 (1033)
|..|.|... +++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.|++..|..|
T Consensus 56 ~~~v~c~~~-------------~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 119 (452)
T 3zyi_A 56 FSKVVCTRR-------------GLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF 119 (452)
T ss_dssp SCEEECCSS-------------CCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred CcEEEECCC-------------CcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhc
Confidence 567777643 233 3444333 578888888888887778888888888888888888887777888
Q ss_pred cCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEccc-CcCCCcCCccccccCCCC
Q 042075 153 SSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSR-NNLDGSIPDTFGWLKNLV 231 (1033)
Q Consensus 153 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~ 231 (1033)
.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++ |.+....+..|..+++|+
T Consensus 120 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 199 (452)
T 3zyi_A 120 NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 199 (452)
T ss_dssp TTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCC
T ss_pred cCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCC
Confidence 8888888888888888866666788888888888888888866667788888888888888 456555555788888888
Q ss_pred cccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccc
Q 042075 232 NLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSN 311 (1033)
Q Consensus 232 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 311 (1033)
+|+|++|++++. | .+..+++|+.|+|++|++++..|. .+..+++|++|+|++|++++..|..|..+++|+.|+|++|
T Consensus 200 ~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 276 (452)
T 3zyi_A 200 YLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPG-SFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN 276 (452)
T ss_dssp EEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGG-GGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCccccc-c-cccccccccEEECcCCcCcccCcc-cccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCC
Confidence 888888888843 4 477788888888888888855454 4457888888888888888888888888888888888888
Q ss_pred cccCcCcc-hhhhccccceeeecCcCCCC
Q 042075 312 KLTGEVPY-LEKLQRLSHFVITRNSLGSG 339 (1033)
Q Consensus 312 ~l~~~~~~-l~~l~~L~~L~l~~N~l~~~ 339 (1033)
+|++.++. +..+++|+.|++++|.+...
T Consensus 277 ~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 277 NLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCCccChHHhccccCCCEEEccCCCcCCC
Confidence 88877664 67788888888888887653
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.3e-29 Score=277.03 Aligned_cols=265 Identities=20% Similarity=0.199 Sum_probs=138.1
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNN 191 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 191 (1033)
.++++++.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..| +..+++|++|+|++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 34444444443333334445555555555555555444555555555555655555554333 5555555666666555
Q ss_pred cCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCcc
Q 042075 192 LTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLD 271 (1033)
Q Consensus 192 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 271 (1033)
+++.. ..++|++|++++|++++..+.. +++|++|++++|++++..|..+..+++|++|++++|.+++..|..
T Consensus 92 l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 163 (317)
T 3o53_A 92 VQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAE 163 (317)
T ss_dssp EEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGG
T ss_pred ccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHH
Confidence 55322 1245666666666665443332 345556666666665544545555555555555555555443333
Q ss_pred ccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccc
Q 042075 272 IGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLT 351 (1033)
Q Consensus 272 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~ 351 (1033)
++..+++|++|+|++|++++. | ....++
T Consensus 164 ~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~-------------------------------------------------- 191 (317)
T 3o53_A 164 LAASSDTLEHLNLQYNFIYDV-K-GQVVFA-------------------------------------------------- 191 (317)
T ss_dssp GGGGTTTCCEEECTTSCCCEE-E-CCCCCT--------------------------------------------------
T ss_pred HhhccCcCCEEECCCCcCccc-c-cccccc--------------------------------------------------
Confidence 333344555555555554422 1 111133
Q ss_pred cccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcE
Q 042075 352 NATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRE 431 (1033)
Q Consensus 352 ~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 431 (1033)
+|+.|++++|+|++. |..+..+++|++|+|++|+++ .+|..+..+++|+.
T Consensus 192 ----------------------------~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 192 ----------------------------KLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp ----------------------------TCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred ----------------------------cCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 444555555555433 223555666666666666666 34555666666666
Q ss_pred EEccccccc-cccCcccccce-eceeecc-ccccCCCCCC
Q 042075 432 LRLQENRFL-GNIPPSIGNLK-LFNLQLS-YNFLQGSIPS 468 (1033)
Q Consensus 432 L~L~~N~l~-~~~p~~~~~l~-L~~L~Ls-~N~l~~~~p~ 468 (1033)
|+|++|.+. +.+|..+..++ |+.|+++ .+.++|..|.
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 666666666 55555555554 6666665 3344444443
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.9e-27 Score=259.02 Aligned_cols=244 Identities=21% Similarity=0.241 Sum_probs=203.6
Q ss_pred EEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccc
Q 042075 87 TILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSN 166 (1033)
Q Consensus 87 ~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 166 (1033)
+.++.++.+++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34556666666 345433 478999999999999877788999999999999999999888999999999999999999
Q ss_pred c-ccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCc
Q 042075 167 E-LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIP 245 (1033)
Q Consensus 167 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 245 (1033)
. ++...|..|..+++|++|++++|++++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 876668899999999999999999998888899999999999999999998777889999999999999999997777
Q ss_pred ccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhcc
Q 042075 246 SSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQR 325 (1033)
Q Consensus 246 ~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~ 325 (1033)
..+.++++|+.|++++|.+++..|..+ ..+++|++|+|++|++++..+..+..+++|++|++++|+++...+...-...
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAF-RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTT-TTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHc-cCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHH
Confidence 778899999999999999987666544 4688999999999999987777788999999999999999876554333333
Q ss_pred ccceeeecC
Q 042075 326 LSHFVITRN 334 (1033)
Q Consensus 326 L~~L~l~~N 334 (1033)
++.+....+
T Consensus 250 l~~~~~~~~ 258 (285)
T 1ozn_A 250 LQKFRGSSS 258 (285)
T ss_dssp HHHCCSEEC
T ss_pred HHhcccccC
Confidence 443333333
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.3e-26 Score=277.96 Aligned_cols=264 Identities=25% Similarity=0.337 Sum_probs=162.0
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeee
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSV 187 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 187 (1033)
..++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35778888888887 6777665 67888888888887 5665 4677888888888877 4555 5677777888
Q ss_pred cccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCc
Q 042075 188 SYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGV 267 (1033)
Q Consensus 188 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 267 (1033)
++|++++ +|. .+++|+.|+|++|+|++ +|.. +++|++|+|++|++++ +|. .
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~----------------- 159 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---L----------------- 159 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---C-----------------
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---c-----------------
Confidence 8887774 343 45677777777777774 4442 3666666666666663 232 1
Q ss_pred cCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhh
Q 042075 268 IPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFL 347 (1033)
Q Consensus 268 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 347 (1033)
+.+|+.|++++|+|++ +| ..+++|+.|++++|++++.++.
T Consensus 160 --------~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~~---------------------------- 199 (622)
T 3g06_A 160 --------PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPTL---------------------------- 199 (622)
T ss_dssp --------CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCCC----------------------------
T ss_pred --------cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCCc----------------------------
Confidence 2345555555555553 33 2345566666666655532211
Q ss_pred cccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCC
Q 042075 348 CSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQ 427 (1033)
Q Consensus 348 ~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 427 (1033)
.++|+.|++++|.++. +|. .+++|++|+|++|+|++ +| ..++
T Consensus 200 ------------------------------~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 200 ------------------------------PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp ------------------------------CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCT
T ss_pred ------------------------------cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCC
Confidence 0234444445554442 222 12456666666666664 34 3446
Q ss_pred CCcEEEccccccccccCcccccce-eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccc
Q 042075 428 NLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQL 494 (1033)
Q Consensus 428 ~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 494 (1033)
+|+.|+|++|+|+ .+|. .+. |+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++.+|..+
T Consensus 242 ~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 242 ELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp TCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred cCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 6667777777666 3444 222 666666666666 567777788888888888888876555433
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.1e-26 Score=251.88 Aligned_cols=219 Identities=22% Similarity=0.301 Sum_probs=150.6
Q ss_pred CCCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCC
Q 042075 68 IHFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGE 147 (1033)
Q Consensus 68 ~~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 147 (1033)
.++|.|.|+.|+-. ..++.+++++++++. +|..+. +.|++|+|++|++++..+..|..+++|++|+|++|.++..
T Consensus 2 ~~~C~~~~~~C~c~--~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCN--NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCCBGGGTCSBEEE--TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CccCCCCCCCCEeC--CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 47999999998643 234567888888874 555443 5677888888888766566777788888888888887754
Q ss_pred CCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCcccccc
Q 042075 148 IPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWL 227 (1033)
Q Consensus 148 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 227 (1033)
.+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 44556777788888888887776555667777777777777777776666677777777777777777776666667777
Q ss_pred CCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccc
Q 042075 228 KNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQ 307 (1033)
Q Consensus 228 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 307 (1033)
++|++|+|++|++++..+..+.++++|+.|++++ |++++..+..+..+++|+.|+
T Consensus 157 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-------------------------N~l~~~~~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDN-------------------------NQLKRVPEGAFDSLEKLKMLQ 211 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS-------------------------SCCSCCCTTTTTTCTTCCEEE
T ss_pred cccceeEecCCcCcEeChhHhccCCCcCEEECCC-------------------------CcCCcCCHHHhccccCCCEEE
Confidence 7777777777777755444455555555555554 444444444555566666666
Q ss_pred cccccccCc
Q 042075 308 VNSNKLTGE 316 (1033)
Q Consensus 308 Ls~N~l~~~ 316 (1033)
+++|++...
T Consensus 212 l~~N~~~c~ 220 (270)
T 2o6q_A 212 LQENPWDCT 220 (270)
T ss_dssp CCSSCBCCS
T ss_pred ecCCCeeCC
Confidence 666666543
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.6e-28 Score=271.40 Aligned_cols=269 Identities=18% Similarity=0.172 Sum_probs=164.1
Q ss_pred ceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeee
Q 042075 253 SITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVIT 332 (1033)
Q Consensus 253 ~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~ 332 (1033)
+++..+++.+.+. ..+..++..+++|++|+|++|++++..|..+..+++|++|++++|++++.++ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECC
T ss_pred ceeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECc
Confidence 3455566666665 3344445556778888888888887777778888888888888888876544 4444444444444
Q ss_pred cCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEccc
Q 042075 333 RNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWN 412 (1033)
Q Consensus 333 ~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 412 (1033)
+|.++.. |. .++|+.|++++|++++..+.. +++|++|++++
T Consensus 89 ~n~l~~l-------------------------------~~-----~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~ 129 (317)
T 3o53_A 89 NNYVQEL-------------------------------LV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLAN 129 (317)
T ss_dssp SSEEEEE-------------------------------EE-----CTTCCEEECCSSCCSEEEECC---CSSCEEEECCS
T ss_pred CCccccc-------------------------------cC-----CCCcCEEECCCCccCCcCccc---cCCCCEEECCC
Confidence 4433210 00 024444555555544433222 23344444444
Q ss_pred CcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCcc-CCCCcccEEecCCCccCCCCC
Q 042075 413 NRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSL-GQSETLTIIDLSNNNLTGTIP 491 (1033)
Q Consensus 413 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 491 (1033)
|++++..+..+..+++ |++|+|++|.+++..|..+ ..+++|++|+|++|++++ +|
T Consensus 130 N~l~~~~~~~~~~l~~-----------------------L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~ 185 (317)
T 3o53_A 130 NKITMLRDLDEGCRSR-----------------------VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VK 185 (317)
T ss_dssp SCCCSGGGBCTGGGSS-----------------------EEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EE
T ss_pred CCCCCccchhhhccCC-----------------------CCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-cc
Confidence 4444444444444444 4444455555544444444 356778888888888762 21
Q ss_pred ccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcc
Q 042075 492 PQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLR 571 (1033)
Q Consensus 492 ~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 571 (1033)
. ...+++|+.|+|++|++++ +|..+..+++|++|+|++|+|+ .+|..+..++
T Consensus 186 ~--------------------------~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 186 G--------------------------QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp C--------------------------CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred c--------------------------ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 1 1125667777777777773 4455777777777777777777 5677777777
Q ss_pred cCCcccccccccc-ccCCcccccccccceeecC-CCcCcccCCCc
Q 042075 572 GLSVLDLSQNNLS-GKIPEFLVGFQLLEYLNLS-NNDFEGMVPTE 614 (1033)
Q Consensus 572 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls-~N~l~g~~p~~ 614 (1033)
+|+.|+|++|+++ +.+|..+..++.|+.|+++ .+.++|..|..
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 8888888888877 6677777777888888877 55677766654
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=5.4e-28 Score=288.31 Aligned_cols=186 Identities=18% Similarity=0.032 Sum_probs=129.1
Q ss_pred eecccCceeEEEEEeCCCCeEEEEEEeeccC----------chhHHHHHHHHHHHHhc-CCCCceeEeeeeccccccCCC
Q 042075 718 LIGAGSFGSVYKGILDEGKTIVAVKVFNLLH----------HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 786 (1033)
Q Consensus 718 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 786 (1033)
..+.|+.|.+..++..-.|+.||||++.... ....+++.+|+++|+++ .|+||++++++ +++++
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECC
Confidence 3556667776666666668889999996431 12346799999999999 79999999999 56677
Q ss_pred ceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEE
Q 042075 787 FKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAH 866 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 866 (1033)
..||||||++|++|.+++.. ...++.. +|+.||+.||+|+|++ |||||||||+|||++++|++|
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~----------~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vK 379 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAA----------GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHAR 379 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHT----------TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHh----------CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEE
Confidence 99999999999999999953 3345543 5899999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 042075 867 VGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKP 927 (1033)
Q Consensus 867 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p 927 (1033)
|+|||+|+......... ...+||+.|||||++.+ .+..++|+||+|++.+++.++..+
T Consensus 380 L~DFGlAr~~~~~~~~~--~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 380 LIDFGSIVTTPQDCSWP--TNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ECCCTTEESCC---CCS--HHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred EeecccCeeCCCCCccc--cCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 99999998765443222 22459999999999876 467889999999998888766544
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.7e-27 Score=280.33 Aligned_cols=77 Identities=26% Similarity=0.271 Sum_probs=45.7
Q ss_pred cccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccc-cccCcccccce-eceeec
Q 042075 380 TLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFL-GNIPPSIGNLK-LFNLQL 457 (1033)
Q Consensus 380 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~-L~~L~L 457 (1033)
+|+.|+|++|.|++..| .|..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|..+..+. ++.+++
T Consensus 192 ~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp TCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEec
Confidence 44445555555544333 35566666666666666663 4555666666777777777666 55566666665 666666
Q ss_pred c
Q 042075 458 S 458 (1033)
Q Consensus 458 s 458 (1033)
+
T Consensus 270 ~ 270 (487)
T 3oja_A 270 Q 270 (487)
T ss_dssp H
T ss_pred c
Confidence 5
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=9.5e-26 Score=245.66 Aligned_cols=217 Identities=20% Similarity=0.225 Sum_probs=187.9
Q ss_pred cccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccc
Q 042075 100 ISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSL 179 (1033)
Q Consensus 100 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 179 (1033)
+|..+. +.|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 455443 579999999999998777799999999999999999997777789999999999999999998888899999
Q ss_pred cccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCc-CCccccccCCCCcccccccccCCCCcccccCCCcee---
Q 042075 180 SKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGS-IPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSIT--- 255 (1033)
Q Consensus 180 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--- 255 (1033)
++|++|++++|++++..+..++++++|++|+|++|++++. +|..|+.+++|++|+|++|++++..+..+..+.+|+
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 179 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCC
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccc
Confidence 9999999999999987777899999999999999999864 589999999999999999999988777887777766
Q ss_pred -EEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcch
Q 042075 256 -VFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYL 320 (1033)
Q Consensus 256 -~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l 320 (1033)
.|++++|.+++ +|...+ ...+|++|+|++|++++..+..+..+++|+.|++++|++++..+.+
T Consensus 180 l~L~ls~n~l~~-~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 180 LSLDLSLNPMNF-IQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp EEEECCSSCCCE-ECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred eeeecCCCcccc-cCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 89999999985 444444 2448999999999999777777899999999999999998776543
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.4e-29 Score=308.20 Aligned_cols=187 Identities=10% Similarity=0.093 Sum_probs=119.3
Q ss_pred CCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccc---cCCcc------------cccccc
Q 042075 69 HFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHH---EIPSE------------FDRLRR 133 (1033)
Q Consensus 69 ~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~---~~p~~------------~~~l~~ 133 (1033)
-|++|+++... ....+++...... .....+..+++|++|+|+++.... ..|.. +..+++
T Consensus 33 vck~W~~~~~~-----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~ 106 (594)
T 2p1m_B 33 VCKSWYEIERW-----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTW 106 (594)
T ss_dssp SCHHHHHHHHH-----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHHHHHHhhhh-----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCC
Confidence 35579888221 2334555543322 112345678899999999976322 22221 346788
Q ss_pred ccEEecccCCCCCCCCcccc-CCCCCcEEEcccc-cccCC-CCCCcccccccceeeecccccCCCCCCCC----CCCCCC
Q 042075 134 LQVLALHNNSIGGEIPANIS-SCSNLIRVRLSSN-ELVGK-IPSELGSLSKIEYFSVSYNNLTGSIPPSF----GNLSSI 206 (1033)
Q Consensus 134 L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L 206 (1033)
|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|
T Consensus 107 L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L 186 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSL 186 (594)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCC
T ss_pred CCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcC
Confidence 99999999988877776675 6889999999988 45432 34445578899999999988876544333 356688
Q ss_pred cEEEcccCc--CCC-cCCccccccCCCCccccccc-ccCCCCcccccCCCceeEEeccCc
Q 042075 207 SFLFLSRNN--LDG-SIPDTFGWLKNLVNLTMAQN-RLSGTIPSSIFNISSITVFDAGIN 262 (1033)
Q Consensus 207 ~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~ls~N 262 (1033)
++|+|++|. ++. .++..+..+++|++|+|++| .+. .+|..+.++++|+.|+++.+
T Consensus 187 ~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 187 VSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBC
T ss_pred cEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccc
Confidence 888888886 221 01112234577888888777 343 36666666667777765443
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=273.35 Aligned_cols=216 Identities=25% Similarity=0.181 Sum_probs=168.8
Q ss_pred CcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeecc
Q 042075 379 TTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLS 458 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls 458 (1033)
++|+.|+|++|.|++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.|++..+. ..|++|+|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~ 107 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAA 107 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECc
Confidence 378888888888888777888888888888888888876655 78888888888888888754332 237888888
Q ss_pred ccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccc-cccccceEEcccccccc
Q 042075 459 YNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVG-NLKNLEMLNVFENKLRG 537 (1033)
Q Consensus 459 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 537 (1033)
+|.|++..+.. +++|+.|+|++|++++..|..+..+.++ +.|+|++|.|++..|..+. .+++|+.|+|++|.|++
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 88888766543 4678888888888887667677666666 8888888888887777776 68888888888888885
Q ss_pred ccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCc
Q 042075 538 EIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFE 608 (1033)
Q Consensus 538 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 608 (1033)
. |. +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|+++
T Consensus 184 ~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 184 V-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp E-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred c-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 5 32 3358888888888888885 44458888888888888888884 6777888888888888888887
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3.3e-25 Score=241.40 Aligned_cols=210 Identities=20% Similarity=0.174 Sum_probs=148.2
Q ss_pred CcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeec
Q 042075 379 TTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQL 457 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~L 457 (1033)
++|+.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|++++..|..+..++ |++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4566666666666666666666666666666666666655555666666666666666666655555555554 555555
Q ss_pred cccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccC-CcCCccccccccceEEccccccc
Q 042075 458 SYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTG-PIPNEVGNLKNLEMLNVFENKLR 536 (1033)
Q Consensus 458 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~ 536 (1033)
++|.+.+..+..+..+++|++|++++|+++ + .+|..+..+++|+.|+|++|+++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQ-------------------------SFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCC-------------------------CCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccc-------------------------eecCchhhccCCCCCEEECCCCCCC
Confidence 555555544445555555555555555544 3 24677788888999999999998
Q ss_pred cccCcccccccccc----eeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCC
Q 042075 537 GEIPRTLGSCIKLE----LLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVP 612 (1033)
Q Consensus 537 ~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p 612 (1033)
+..+..|..+.+|+ .|++++|++++..+..+ ...+|+.|+|++|+|++..+..+..+++|+.|+|++|+++|..|
T Consensus 163 ~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 77777888888887 88999999985544444 44589999999999997767778899999999999999999887
Q ss_pred Cc
Q 042075 613 TE 614 (1033)
Q Consensus 613 ~~ 614 (1033)
.-
T Consensus 242 ~l 243 (276)
T 2z62_A 242 RI 243 (276)
T ss_dssp TT
T ss_pred ch
Confidence 54
No 326
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=1e-24 Score=233.66 Aligned_cols=192 Identities=19% Similarity=0.217 Sum_probs=161.4
Q ss_pred CCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCC
Q 042075 69 HFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEI 148 (1033)
Q Consensus 69 ~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 148 (1033)
+||.|.|++|... .+.+++++++++ .+|..+. +.++.|+|++|++++..|..|..+++|++|+|++|.|++..
T Consensus 3 ~Cp~~~gC~C~~~----~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 3 TCETVTGCTCNEG----KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp -CHHHHSSEEEGG----GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred cCCCCCceEcCCC----CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 6899999999542 235788888887 4666554 68899999999999888888999999999999999999888
Q ss_pred CccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccC
Q 042075 149 PANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLK 228 (1033)
Q Consensus 149 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 228 (1033)
|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|+.++
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 88889999999999999999877777888999999999999999977777788899999999999999977777888899
Q ss_pred CCCcccccccccCCCCcccccCCCceeEEeccCccccCc
Q 042075 229 NLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGV 267 (1033)
Q Consensus 229 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 267 (1033)
+|++|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999999999877777777788888888888877644
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.6e-24 Score=231.31 Aligned_cols=203 Identities=21% Similarity=0.262 Sum_probs=129.9
Q ss_pred CCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecc
Q 042075 110 LKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSY 189 (1033)
Q Consensus 110 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 189 (1033)
.+++++++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 455666666665 3554443 3556666666666544444555556666666666655533333445555555555555
Q ss_pred cccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccC
Q 042075 190 NNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIP 269 (1033)
Q Consensus 190 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 269 (1033)
|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-------------------------~~~ 149 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-------------------------SLP 149 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------CCC
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-------------------------ccC
Confidence 5555444445555555555555555555544445555555555555555544 334
Q ss_pred ccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcc-hhhhccccceeeecCcCCCCC
Q 042075 270 LDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPY-LEKLQRLSHFVITRNSLGSGE 340 (1033)
Q Consensus 270 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~l~~N~l~~~~ 340 (1033)
...+..+++|++|+|++|++++..+..|..+++|++|++++|++++.++. +..+++|+.|++++|.+....
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 44444567777778888888877777899999999999999999988775 788999999999999987653
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=1.8e-28 Score=298.41 Aligned_cols=420 Identities=15% Similarity=0.125 Sum_probs=217.6
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCC---CCCcc------------ccCCCCCcEEEcccccccCCCCCCc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGG---EIPAN------------ISSCSNLIRVRLSSNELVGKIPSEL 176 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~---~~p~~------------~~~l~~L~~L~Ls~N~l~~~~p~~~ 176 (1033)
.+++++.... ..+..+.++++|++|+|+++.... ..|.. ...+++|++|+|++|.+++..+..+
T Consensus 47 ~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l 125 (594)
T 2p1m_B 47 KVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELI 125 (594)
T ss_dssp EEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHH
Confidence 4555543322 122345667788888888765321 22221 1245566666666666654444444
Q ss_pred c-cccccceeeeccc-ccCCC-CCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCc
Q 042075 177 G-SLSKIEYFSVSYN-NLTGS-IPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISS 253 (1033)
Q Consensus 177 ~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 253 (1033)
. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++..+ ...+++
T Consensus 126 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~--------------------~~~~~~ 185 (594)
T 2p1m_B 126 AKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHF--------------------PDTYTS 185 (594)
T ss_dssp HHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGS--------------------CTTCCC
T ss_pred HHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHH--------------------hhcCCc
Confidence 3 4556666666655 33321 22222345555666665555554333333211 112334
Q ss_pred eeEEeccCccccCccCc----cccccccccceeeeccc-ccCCCCCccCcCCCCccccccc-------cccccCcCcchh
Q 042075 254 ITVFDAGINQIQGVIPL----DIGFTLQNLQFFSVGRN-QLTGAIPPAISNASNLEVFQVN-------SNKLTGEVPYLE 321 (1033)
Q Consensus 254 L~~L~ls~N~l~~~~p~----~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls-------~N~l~~~~~~l~ 321 (1033)
|+.|++++|. +.++. .+...+++|++|+|++| .+++ +|..+..+++|+.|+++ .|.+.+.++.+.
T Consensus 186 L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 186 LVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred CcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 4444444443 11111 11112345555555554 2222 44445555555555533 333333333344
Q ss_pred hhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCC-cccc
Q 042075 322 KLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIP-AAFG 400 (1033)
Q Consensus 322 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p-~~~~ 400 (1033)
.+++|+.+. .+... ..+.+|..+. ..++|+.|++++|.+++... ..+.
T Consensus 263 ~~~~L~~Ls-----------------------------~~~~~-~~~~l~~~~~-~~~~L~~L~L~~~~l~~~~l~~~~~ 311 (594)
T 2p1m_B 263 GCKELRCLS-----------------------------GFWDA-VPAYLPAVYS-VCSRLTTLNLSYATVQSYDLVKLLC 311 (594)
T ss_dssp TCTTCCEEE-----------------------------CCBTC-CGGGGGGGHH-HHTTCCEEECTTCCCCHHHHHHHHT
T ss_pred cCCCccccc-----------------------------CCccc-chhhHHHHHH-hhCCCCEEEccCCCCCHHHHHHHHh
Confidence 444444331 11100 0111222221 23678888888888764432 3356
Q ss_pred CCCCCCEEEcccCccccc-CChhhhcCCCCcEEEcc---------ccccccccCcccc-cce-eceeeccccccCCCCCC
Q 042075 401 KFVKLLRLEMWNNRLSGT-IPPAIGELQNLRELRLQ---------ENRFLGNIPPSIG-NLK-LFNLQLSYNFLQGSIPS 468 (1033)
Q Consensus 401 ~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~-L~~L~Ls~N~l~~~~p~ 468 (1033)
++++|++|++++| +... ++.....+++|++|+|+ .|.+++.....+. .++ |+.|+++.|.+++..+.
T Consensus 312 ~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~ 390 (594)
T 2p1m_B 312 QCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALI 390 (594)
T ss_dssp TCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHH
T ss_pred cCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHH
Confidence 8899999999988 4422 33334458899999884 3455543333332 244 77777777777755544
Q ss_pred ccC-CCCcccEEecC--C----CccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCc
Q 042075 469 SLG-QSETLTIIDLS--N----NNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPR 541 (1033)
Q Consensus 469 ~~~-~l~~L~~L~Ls--~----N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 541 (1033)
.+. .+++|+.|+++ + |+++ ..|.. ..++..+..+++|+.|+|++ .+++..+.
T Consensus 391 ~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~-------------------~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 391 TIARNRPNMTRFRLCIIEPKAPDYLT-LEPLD-------------------IGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp HHHHHCTTCCEEEEEESSTTCCCTTT-CCCTH-------------------HHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred HHHhhCCCcceeEeecccCCCccccc-CCchh-------------------hHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 444 46778888887 3 3443 11110 00111134456677777765 55555455
Q ss_pred cccc-ccccceeecccccccCcccccc-cCcccCCccccccccccccCCc-ccccccccceeecCCCcCc
Q 042075 542 TLGS-CIKLELLQMQGNFLQGPIPSSL-SSLRGLSVLDLSQNNLSGKIPE-FLVGFQLLEYLNLSNNDFE 608 (1033)
Q Consensus 542 ~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~ 608 (1033)
.++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+. .+..+++|++|++++|+++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 5554 6677777777777765555444 5567777777777777554443 3345677777777777763
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.1e-24 Score=234.70 Aligned_cols=204 Identities=19% Similarity=0.230 Sum_probs=135.2
Q ss_pred cCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccc
Q 042075 104 VGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIE 183 (1033)
Q Consensus 104 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 183 (1033)
+.++++++++++++|+++ .+|..+. +++++|+|++|.|++..|..|.++++|++|+|++|.+++. |.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 445666666677666666 4555443 4666777777777666666666677777777777776633 222 5666777
Q ss_pred eeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcc
Q 042075 184 YFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQ 263 (1033)
Q Consensus 184 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 263 (1033)
+|+|++|+++ .+|..+.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 7777777766 556666666777777777777776666667777777777777777765555555666666666666666
Q ss_pred ccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccC
Q 042075 264 IQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTG 315 (1033)
Q Consensus 264 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 315 (1033)
|+ .+|..++..+++|++|+|++|+|+ .+|..+..+.+|+.|+|++|++..
T Consensus 160 l~-~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 160 LT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CC-ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 66 455555556777777777777777 566666667777777777777754
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.9e-24 Score=232.09 Aligned_cols=205 Identities=20% Similarity=0.237 Sum_probs=119.1
Q ss_pred eEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcc
Q 042075 85 RVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLS 164 (1033)
Q Consensus 85 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 164 (1033)
.++.+++.++.++. .+.+..+++|++|+|++|.+++ + +.+..+++|++|+|++|.+++..|..++++++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 34555565555542 1235556666666666666654 2 355566666666666666665555555666666666666
Q ss_pred cccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCC
Q 042075 165 SNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTI 244 (1033)
Q Consensus 165 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 244 (1033)
+|++++..|..|..+++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|+.+++|++|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 66666555555566666666666666666555555566666666666666666555555566666666666666666555
Q ss_pred cccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCC
Q 042075 245 PSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNAS 301 (1033)
Q Consensus 245 p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 301 (1033)
|..+..+++|+.|++++|.+.+. +++|++|+++.|.++|.+|.+++.+.
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~~--------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDCT--------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCC--------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHhCCcCCCEEEccCCCcccc--------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 55555666666666666655532 23455555555555555555555443
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5.2e-24 Score=232.95 Aligned_cols=203 Identities=25% Similarity=0.256 Sum_probs=140.7
Q ss_pred cCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeec
Q 042075 378 STTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQL 457 (1033)
Q Consensus 378 ~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~L 457 (1033)
.++++.+++++|.++. +|..+. ++++.|+|++|++++..|..|..+++|+.|+|++|++++..+.
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------------ 73 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD------------ 73 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC------------
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC------------
Confidence 3567777777777764 343332 5677777777777766667777777777777777776632221
Q ss_pred cccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcccccccc
Q 042075 458 SYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRG 537 (1033)
Q Consensus 458 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 537 (1033)
..+++|++|+|++|+++ .+|..+..+.++ +.|++++|+|++..|..|..+++|+.|+|++|+|++
T Consensus 74 -------------~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 74 -------------GTLPVLGTLDLSHNQLQ-SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp -------------SCCTTCCEEECCSSCCS-SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred -------------CCCCcCCEEECCCCcCC-cCchhhccCCCC-CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc
Confidence 34455555555555555 455545444444 555666666665555667778888888888888886
Q ss_pred ccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccC
Q 042075 538 EIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMV 611 (1033)
Q Consensus 538 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~ 611 (1033)
..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++.+..
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 66667788888888888888888655566777888888888888887 67777777788888888888887654
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2e-24 Score=256.07 Aligned_cols=189 Identities=16% Similarity=0.123 Sum_probs=141.6
Q ss_pred hCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--------hhHHHHHHHHHHHHhcCCCCceeEeeeecccc
Q 042075 710 TDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--------GAFKSFIAECNTLKNIRHRNLVKILTACSGVD 781 (1033)
Q Consensus 710 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 781 (1033)
...+...+.||+|+||+||+|... ++.+++|+...... ...+++.+|++++++++||||+++..++.
T Consensus 335 ~~~~~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--- 409 (540)
T 3en9_A 335 KKRKIPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV--- 409 (540)
T ss_dssp -------------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE---
T ss_pred cccCCCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE---
Confidence 333445679999999999999654 67889998643211 11355899999999999999995544432
Q ss_pred ccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecC
Q 042075 782 YQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDE 861 (1033)
Q Consensus 782 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~ 861 (1033)
..+..++||||+++++|.++++. +..++.|+++||+|||++ +|+||||||+||++++
T Consensus 410 --~~~~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~ 466 (540)
T 3en9_A 410 --DLDNKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK 466 (540)
T ss_dssp --ETTTTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS
T ss_pred --eCCccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC
Confidence 23356999999999999999942 458999999999999999 9999999999999998
Q ss_pred CCcEEEeecccceecCCCCccc-----cccccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCC
Q 042075 862 EMIAHVGDFGLATFLPLSHAQT-----SSIFAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 862 ~~~~kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
.+||+|||+|+......... ......||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 467 --~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 467 --DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp --SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred --eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 99999999999875432211 1123459999999999887 56888899999999999988887776
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.4e-23 Score=223.28 Aligned_cols=197 Identities=15% Similarity=0.201 Sum_probs=160.4
Q ss_pred CCCCEEEecCCCccccCCccccccccccEEecccCC-CCCCCCccccCCCCCcEEEccc-ccccCCCCCCccccccccee
Q 042075 108 SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNS-IGGEIPANISSCSNLIRVRLSS-NELVGKIPSELGSLSKIEYF 185 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 185 (1033)
++|++|+|++|++++..+..|..+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999997777789999999999999997 8866666899999999999998 99997667889999999999
Q ss_pred eecccccCCCCCCCCCCCCCCc---EEEcccC-cCCCcCCccccccCCCC-cccccccccCCCCcccccCCCceeEEecc
Q 042075 186 SVSYNNLTGSIPPSFGNLSSIS---FLFLSRN-NLDGSIPDTFGWLKNLV-NLTMAQNRLSGTIPSSIFNISSITVFDAG 260 (1033)
Q Consensus 186 ~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 260 (1033)
++++|++++ +|. |.++++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|...+..++|+.|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 999999996 666 88888888 9999999 99987778899999999 9999999998 566655555788888888
Q ss_pred Ccc-ccCccCccccccc-cccceeeecccccCCCCCccCcCCCCccccccccc
Q 042075 261 INQ-IQGVIPLDIGFTL-QNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSN 311 (1033)
Q Consensus 261 ~N~-l~~~~p~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 311 (1033)
+|+ ++ .+|...+..+ ++|++|++++|++++. |.. .+++|+.|+++++
T Consensus 188 ~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCCcc-cCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 884 76 5555556566 7777777777777743 332 4556666666654
No 334
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.6e-23 Score=227.21 Aligned_cols=205 Identities=20% Similarity=0.248 Sum_probs=180.3
Q ss_pred ccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCccccccc
Q 042075 103 HVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKI 182 (1033)
Q Consensus 103 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 182 (1033)
.+..+++|+.|++++|.++. ++ .+..+++|++|+|++|.+++ + ..++++++|++|+|++|.+++..|..|.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 35578899999999999873 33 58899999999999999985 3 478999999999999999998777888999999
Q ss_pred ceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCc
Q 042075 183 EYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGIN 262 (1033)
Q Consensus 183 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 262 (1033)
++|+|++|++++..|..|+++++|++|+|++|++++..+..|+.+++|++|++++|++++..+..+.++++|+.|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 99999999999888888999999999999999999888888999999999999999999887878899999999999999
Q ss_pred cccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcc
Q 042075 263 QIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPY 319 (1033)
Q Consensus 263 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 319 (1033)
++++..| ..+..+++|++|+|++|.+.+. +++|+.|+++.|+++|.+|.
T Consensus 192 ~l~~~~~-~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 192 QLKSVPD-GVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CCSCCCT-TTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred cCCccCH-HHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 9996544 5556789999999999998854 45799999999999988764
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.7e-24 Score=235.08 Aligned_cols=226 Identities=15% Similarity=0.146 Sum_probs=181.4
Q ss_pred CCCCEEEecCCCcccc-CCc--cccccccccEEecccCCCCCCCCccc--cCCCCCcEEEcccccccCCCC----CCccc
Q 042075 108 SFLKVLDLHNNSFHHE-IPS--EFDRLRRLQVLALHNNSIGGEIPANI--SSCSNLIRVRLSSNELVGKIP----SELGS 178 (1033)
Q Consensus 108 ~~L~~L~L~~n~l~~~-~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 178 (1033)
..++.|.+.++.++.. +.. .+..+++|++|+|++|.+++..|..+ +.+++|++|+|++|++++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888988887642 111 12345779999999999999999988 899999999999999997665 34567
Q ss_pred ccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCc--C--CccccccCCCCcccccccccCCCCcc----cccC
Q 042075 179 LSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGS--I--PDTFGWLKNLVNLTMAQNRLSGTIPS----SIFN 250 (1033)
Q Consensus 179 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~ 250 (1033)
+++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .+.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 89999999999999988888999999999999999998752 2 334578999999999999997 3333 2467
Q ss_pred CCceeEEeccCccccCccCcccccc--ccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccc
Q 042075 251 ISSITVFDAGINQIQGVIPLDIGFT--LQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSH 328 (1033)
Q Consensus 251 l~~L~~L~ls~N~l~~~~p~~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~ 328 (1033)
+++|++|||++|++++.+|..++.. +++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |.+..+++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccE
Confidence 8999999999999998877665532 379999999999999 6677664 7899999999999975 33677788888
Q ss_pred eeeecCcCCC
Q 042075 329 FVITRNSLGS 338 (1033)
Q Consensus 329 L~l~~N~l~~ 338 (1033)
|++++|.+++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 8888888764
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=7.6e-24 Score=234.63 Aligned_cols=224 Identities=16% Similarity=0.152 Sum_probs=188.9
Q ss_pred eEEEEEcCCCCCCccccc---ccCCCCCCCEEEecCCCccccCCccc--cccccccEEecccCCCCCCCC----ccccCC
Q 042075 85 RVTILDLKSLKLAGYISA---HVGNLSFLKVLDLHNNSFHHEIPSEF--DRLRRLQVLALHNNSIGGEIP----ANISSC 155 (1033)
Q Consensus 85 ~v~~l~l~~~~l~g~~~~---~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l 155 (1033)
++..+++.+..++...-. .+..+++|++|+|++|.+++.+|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 466777777776542111 12345679999999999999999998 999999999999999998766 445689
Q ss_pred CCCcEEEcccccccCCCCCCcccccccceeeecccccCCC--C--CCCCCCCCCCcEEEcccCcCCCcCCc----ccccc
Q 042075 156 SNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGS--I--PPSFGNLSSISFLFLSRNNLDGSIPD----TFGWL 227 (1033)
Q Consensus 156 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l 227 (1033)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..++++++|++|+|++|+++. ++. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999988889999999999999999998752 2 2345789999999999999983 343 35788
Q ss_pred CCCCcccccccccCCCCcccccCC---CceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCcc
Q 042075 228 KNLVNLTMAQNRLSGTIPSSIFNI---SSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLE 304 (1033)
Q Consensus 228 ~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 304 (1033)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..++ ++|++|+|++|+|++. |. +..+++|+
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 999999999999998889888877 69999999999999 7787764 7999999999999964 43 68889999
Q ss_pred ccccccccccC
Q 042075 305 VFQVNSNKLTG 315 (1033)
Q Consensus 305 ~L~Ls~N~l~~ 315 (1033)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999975
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.6e-25 Score=253.79 Aligned_cols=177 Identities=21% Similarity=0.228 Sum_probs=102.1
Q ss_pred EEcCCCCCCcccccccCCCCCCCEEEecCCCccccCC----ccccccc-cccEEecccCCCCCCCCccccCC-----CCC
Q 042075 89 LDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIP----SEFDRLR-RLQVLALHNNSIGGEIPANISSC-----SNL 158 (1033)
Q Consensus 89 l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l-----~~L 158 (1033)
.+++.++++|.++..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566667777666666666667777777777765544 5566666 67777777777766656555554 667
Q ss_pred cEEEcccccccCCCCCCcccc-----cccceeeecccccCCCCCCCC----CC-CCCCcEEEcccCcCCCcCC----ccc
Q 042075 159 IRVRLSSNELVGKIPSELGSL-----SKIEYFSVSYNNLTGSIPPSF----GN-LSSISFLFLSRNNLDGSIP----DTF 224 (1033)
Q Consensus 159 ~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~p----~~~ 224 (1033)
++|+|++|++++..+..+... ++|++|+|++|++++..+..+ .. .++|++|+|++|++++..+ ..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 777777777765555443332 566666666666665444332 22 2466666666666664322 222
Q ss_pred cccC-CCCcccccccccCCCCccccc----CC-CceeEEeccCcccc
Q 042075 225 GWLK-NLVNLTMAQNRLSGTIPSSIF----NI-SSITVFDAGINQIQ 265 (1033)
Q Consensus 225 ~~l~-~L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~ls~N~l~ 265 (1033)
..++ +|++|+|++|++++..+..+. .+ ++|++|||++|.|+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~ 209 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLG 209 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCC
Confidence 3333 566666666666544443322 22 34555555555544
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.8e-25 Score=253.56 Aligned_cols=263 Identities=14% Similarity=0.100 Sum_probs=150.1
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCCCCC----ccccCCC-CCcEEEcccccccCCCCCCcccc-----cc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIP----ANISSCS-NLIRVRLSSNELVGKIPSELGSL-----SK 181 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 181 (1033)
.++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677788887777766666678888888888775555 5666777 77777777777776666666654 66
Q ss_pred cceeeecccccCCCCCCCCC----CC-CCCcEEEcccCcCCCcCCccccc-----cCCCCcccccccccCCCCccc----
Q 042075 182 IEYFSVSYNNLTGSIPPSFG----NL-SSISFLFLSRNNLDGSIPDTFGW-----LKNLVNLTMAQNRLSGTIPSS---- 247 (1033)
Q Consensus 182 L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~---- 247 (1033)
|++|+|++|++++..+..+. .+ ++|++|+|++|+|++..+..+.. .++|++|+|++|++++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 77777777776655544322 22 56666666666666544443332 135555555555555322111
Q ss_pred ccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCc----CC-CCccccccccccccCcCcchhh
Q 042075 248 IFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAIS----NA-SNLEVFQVNSNKLTGEVPYLEK 322 (1033)
Q Consensus 248 l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~~~l~~ 322 (1033)
+..++ .+|++|+|++|++++..+..+. .+ ++|++|+|++|++++....
T Consensus 162 l~~~~------------------------~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~--- 214 (362)
T 3goz_A 162 LAAIP------------------------ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA--- 214 (362)
T ss_dssp HHTSC------------------------TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH---
T ss_pred HhcCC------------------------ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH---
Confidence 11111 2455555555555444443322 22 3566666666655532110
Q ss_pred hccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCC----cc
Q 042075 323 LQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIP----AA 398 (1033)
Q Consensus 323 l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p----~~ 398 (1033)
.++..+....++|+.|+|++|.|++..+ ..
T Consensus 215 ----------------------------------------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 248 (362)
T 3goz_A 215 ----------------------------------------------ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLL 248 (362)
T ss_dssp ----------------------------------------------HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHT
T ss_pred ----------------------------------------------HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHH
Confidence 0111122222356666666666665433 33
Q ss_pred ccCCCCCCEEEcccCcccccC-------ChhhhcCCCCcEEEccccccccccCccc
Q 042075 399 FGKFVKLLRLEMWNNRLSGTI-------PPAIGELQNLRELRLQENRFLGNIPPSI 447 (1033)
Q Consensus 399 ~~~l~~L~~L~L~~N~l~~~~-------p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 447 (1033)
+..+++|++|+|++|.+.+.. +..+..+++|+.|||++|++.+..+..+
T Consensus 249 ~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 249 KDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp TTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 456677888888888754333 3345667778888888888775544433
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=6.4e-23 Score=231.22 Aligned_cols=244 Identities=18% Similarity=0.177 Sum_probs=198.8
Q ss_pred cceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCc
Q 042075 71 CQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPA 150 (1033)
Q Consensus 71 c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 150 (1033)
|+|..|.|+.. +++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~~~-------------~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 9 CSNRVFLCQES-------------KVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp EETTEEEEEST-------------TCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred eeCCEEEecCC-------------CCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 78888999754 344 456555 36899999999999965556899999999999999999776764
Q ss_pred -cccCCCCCcE-EEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEccc-CcCCCcCCcccccc
Q 042075 151 -NISSCSNLIR-VRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSR-NNLDGSIPDTFGWL 227 (1033)
Q Consensus 151 -~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l 227 (1033)
.|.++++|++ +++++|++++..|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 6789998775 77778999977789999999999999999999987777788888899999966 67887777788877
Q ss_pred C-CCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCcccc
Q 042075 228 K-NLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVF 306 (1033)
Q Consensus 228 ~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 306 (1033)
. .++.|+|++|+|+ .+|...+...+|+.|++++|+..+.+|.++|..+++|++|+|++|+|+...+..+.++++|+.+
T Consensus 153 ~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l 231 (350)
T 4ay9_X 153 SFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR 231 (350)
T ss_dssp BSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECT
T ss_pred chhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhc
Confidence 5 6899999999999 6777777888999999986554458999988899999999999999997666677777777776
Q ss_pred ccccccccCcCcchhhhccccceeeecC
Q 042075 307 QVNSNKLTGEVPYLEKLQRLSHFVITRN 334 (1033)
Q Consensus 307 ~Ls~N~l~~~~~~l~~l~~L~~L~l~~N 334 (1033)
++. .++ ..|.+.++++|+.+++.++
T Consensus 232 ~~~--~l~-~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 232 STY--NLK-KLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp TCT--TCC-CCCCTTTCCSCCEEECSCH
T ss_pred cCC--CcC-cCCCchhCcChhhCcCCCC
Confidence 653 344 4556778888888877654
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.5e-23 Score=222.92 Aligned_cols=203 Identities=19% Similarity=0.173 Sum_probs=177.9
Q ss_pred cCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEccccc-ccCCCCCCcccccccceeeecc-cccCCCCCCCC
Q 042075 123 EIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE-LVGKIPSELGSLSKIEYFSVSY-NNLTGSIPPSF 200 (1033)
Q Consensus 123 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~ 200 (1033)
.+|. +. ++|++|+|++|++++..+..|+++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 389999999999997777789999999999999997 8866667899999999999999 99997777889
Q ss_pred CCCCCCcEEEcccCcCCCcCCccccccCCCC---ccccccc-ccCCCCcccccCCCcee-EEeccCccccCccCcccccc
Q 042075 201 GNLSSISFLFLSRNNLDGSIPDTFGWLKNLV---NLTMAQN-RLSGTIPSSIFNISSIT-VFDAGINQIQGVIPLDIGFT 275 (1033)
Q Consensus 201 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~ls~N~l~~~~p~~~~~~ 275 (1033)
.++++|++|++++|++++ +|+ |..+++|+ +|++++| ++++..+..+.++++|+ .|++++|+++ .+|...+..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 999999999999999996 676 88999998 9999999 99977777899999999 9999999999 788877765
Q ss_pred ccccceeeecccc-cCCCCCccCcCC-CCccccccccccccCcCcchhhhccccceeeecC
Q 042075 276 LQNLQFFSVGRNQ-LTGAIPPAISNA-SNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRN 334 (1033)
Q Consensus 276 l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N 334 (1033)
.+|++|+|++|+ +++..+..|..+ ++|+.|++++|++++.++. .+++|+.|.++++
T Consensus 179 -~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 -TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp -CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred -CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 899999999995 997778889999 9999999999999976654 5667777776654
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=6.6e-24 Score=251.29 Aligned_cols=208 Identities=22% Similarity=0.361 Sum_probs=157.6
Q ss_pred CCCCCCCCCCc-----ceeee-EecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccc
Q 042075 61 FGSWNESIHFC-----QWHGV-TCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRL 134 (1033)
Q Consensus 61 ~~~W~~~~~~c-----~w~gv-~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 134 (1033)
+.+|..+.++| .|.|+ .|.. .+++.|+|+++++++ +|+.+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLI---NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHH---TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHhccCCccccccchhhhcccccc---CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 45676556677 79999 7864 368889999999987 777663 78999999999998 677 457899
Q ss_pred cEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccC
Q 042075 135 QVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRN 214 (1033)
Q Consensus 135 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 214 (1033)
++|+|++|.|++ +|. +.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 999999999986 777 665 89999999999986 666 67899999999999985 565 5678999999999
Q ss_pred cCCCcCCccccccCCCCcccccccccCCCCcccccCCCce-------eEEeccCccccCccCccccccccccceeeeccc
Q 042075 215 NLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSI-------TVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRN 287 (1033)
Q Consensus 215 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-------~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N 287 (1033)
+|++ +|. |. ++|++|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..++. +++|++|+|++|
T Consensus 171 ~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~-l~~L~~L~L~~N 240 (571)
T 3cvr_A 171 QLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILS-LDPTCTIILEDN 240 (571)
T ss_dssp CCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGG-SCTTEEEECCSS
T ss_pred CCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhc-CCCCCEEEeeCC
Confidence 9986 666 65 88888999999888 6666 443 55 67777777766 45655553 666666666666
Q ss_pred ccCCCCCccCcCC
Q 042075 288 QLTGAIPPAISNA 300 (1033)
Q Consensus 288 ~l~~~~p~~~~~l 300 (1033)
.+++.+|..+..+
T Consensus 241 ~l~~~~p~~l~~l 253 (571)
T 3cvr_A 241 PLSSRIRESLSQQ 253 (571)
T ss_dssp SCCHHHHHHHHHH
T ss_pred cCCCcCHHHHHHh
Confidence 6666666555544
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.7e-25 Score=251.23 Aligned_cols=212 Identities=15% Similarity=0.175 Sum_probs=115.2
Q ss_pred CCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCC--CCCCEEEecCCCccccCCccccccccccEEecccCCCCC
Q 042075 69 HFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNL--SFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGG 146 (1033)
Q Consensus 69 ~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 146 (1033)
-|..|+++.|+.. .++.+|++++.+. +..+..+ +.++.|++++|.+.+..|. +..+++|++|+|++|.+++
T Consensus 35 vc~~W~~~~~~~~---~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 35 VCKRWYRLASDES---LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SCHHHHHHHTCST---TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHhcCch---hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 4568999988643 3455666665554 2334444 5566666666666554443 3455666666666666554
Q ss_pred C-CCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc-ccCCC-CCCCCCCCCCCcEEEcccC-cCCCc-CC
Q 042075 147 E-IPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN-NLTGS-IPPSFGNLSSISFLFLSRN-NLDGS-IP 221 (1033)
Q Consensus 147 ~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p 221 (1033)
. +|..+.++++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 3 5555555666666666666555555555555555555555555 34431 3333445555555555555 55432 34
Q ss_pred ccccccC-CCCccccccc--ccC-CCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccc-cCCCCCcc
Q 042075 222 DTFGWLK-NLVNLTMAQN--RLS-GTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQ-LTGAIPPA 296 (1033)
Q Consensus 222 ~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~ 296 (1033)
..+..++ +|++|+|++| .++ +.+|..+.+ +++|++|++++|. +++..+..
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~-------------------------~~~L~~L~l~~~~~l~~~~~~~ 242 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR-------------------------CPNLVHLDLSDSVMLKNDCFQE 242 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH-------------------------CTTCSEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhh-------------------------CCCCCEEeCCCCCcCCHHHHHH
Confidence 4444555 5555555555 232 223333333 4555555555555 44445555
Q ss_pred CcCCCCcccccccccc
Q 042075 297 ISNASNLEVFQVNSNK 312 (1033)
Q Consensus 297 ~~~l~~L~~L~Ls~N~ 312 (1033)
+..+++|+.|++++|.
T Consensus 243 l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 243 FFQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGGCTTCCEEECTTCT
T ss_pred HhCCCCCCEeeCCCCC
Confidence 5666666666666663
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=3.3e-22 Score=207.63 Aligned_cols=186 Identities=20% Similarity=0.244 Sum_probs=127.4
Q ss_pred CCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCC
Q 042075 69 HFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEI 148 (1033)
Q Consensus 69 ~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 148 (1033)
..|.|.+|.|+..+ ++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 5 C~C~~~~v~c~~~~-------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (208)
T 2o6s_A 5 CSCSGTTVECYSQG-------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP 68 (208)
T ss_dssp CEEETTEEECCSSC-------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CEECCCEEEecCCC-------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC
Confidence 34899999997642 22 233322 357788888888887655566777788888888888777555
Q ss_pred CccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccC
Q 042075 149 PANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLK 228 (1033)
Q Consensus 149 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 228 (1033)
+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..++
T Consensus 69 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 148 (208)
T 2o6s_A 69 NGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred hhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCC
Confidence 55567777777777777777755555567777777777777777766666667777777777777777765555566666
Q ss_pred CCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCC
Q 042075 229 NLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASN 302 (1033)
Q Consensus 229 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 302 (1033)
+|++|+|++|.+.+ .+++|++|+++.|+++|.+|.+++.++.
T Consensus 149 ~L~~L~l~~N~~~~--------------------------------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 149 SLQYIWLHDNPWDC--------------------------------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TCCEEECCSCCBCC--------------------------------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CccEEEecCCCeec--------------------------------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 66666666665543 2345777777777777777777776654
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.7e-22 Score=212.32 Aligned_cols=180 Identities=21% Similarity=0.275 Sum_probs=112.6
Q ss_pred CCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeec
Q 042075 109 FLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVS 188 (1033)
Q Consensus 109 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 188 (1033)
..++++++++.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3456666666666 4555554 466666777776666666666666666666666666666556666666666666666
Q ss_pred ccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCcc
Q 042075 189 YNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVI 268 (1033)
Q Consensus 189 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 268 (1033)
+|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------------------ 153 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK------------------ 153 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT------------------
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc------------------
Confidence 66666555566666666666666666666555555666666666666666666444444444
Q ss_pred CccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCc
Q 042075 269 PLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGE 316 (1033)
Q Consensus 269 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 316 (1033)
+++|++|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 154 -------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 154 -------LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp -------CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred -------CcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 44555555555555555555566666666666666666654
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.2e-22 Score=222.37 Aligned_cols=198 Identities=23% Similarity=0.376 Sum_probs=151.8
Q ss_pred cCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccc
Q 042075 104 VGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIE 183 (1033)
Q Consensus 104 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 183 (1033)
...+++|++|++++|.++. +| .+..+++|++|+|++|.+++ +|. +.++++|++|+|++|++++ +| .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 3457788888888888873 55 57888888888888888874 444 8888888888888888874 33 678888888
Q ss_pred eeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcc
Q 042075 184 YFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQ 263 (1033)
Q Consensus 184 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 263 (1033)
+|++++|++++. |. +..+++|++|+|++|++++..+ ++.+++|++|+|++|++++..+ +..+++|+.|++++|+
T Consensus 111 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 888888888854 33 7888888888888888885443 7888888888888888885433 7788888888888888
Q ss_pred ccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCc
Q 042075 264 IQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVP 318 (1033)
Q Consensus 264 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 318 (1033)
+++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++.+.
T Consensus 185 l~~~~~---l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 185 ISDISP---LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCCCGG---GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECCCE
T ss_pred cCcChh---hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecCCe
Confidence 875444 456788888888888888554 37788888888888888876543
No 346
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=2e-22 Score=218.81 Aligned_cols=164 Identities=19% Similarity=0.133 Sum_probs=127.7
Q ss_pred HHHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc------------------hhHHHHHHHHHHHHhc
Q 042075 704 QNLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH------------------GAFKSFIAECNTLKNI 765 (1033)
Q Consensus 704 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 765 (1033)
..+......|.+.+.||+|+||.||+|++ .+++.||||+++.... .....+.+|+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34445566777889999999999999999 6899999999864221 1345688999999999
Q ss_pred CCCCceeEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCC
Q 042075 766 RHRNLVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQP 845 (1033)
Q Consensus 766 ~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 845 (1033)
+| +++.+++. .+..++||||++|++|.+ +.. .+...++.|++.||+|||+.
T Consensus 162 ~~---~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~----------------~~~~~i~~qi~~~l~~lH~~--- 212 (282)
T 1zar_A 162 QG---LAVPKVYA------WEGNAVLMELIDAKELYR-VRV----------------ENPDEVLDMILEEVAKFYHR--- 212 (282)
T ss_dssp TT---SSSCCEEE------EETTEEEEECCCCEEGGG-CCC----------------SCHHHHHHHHHHHHHHHHHT---
T ss_pred cC---CCcCeEEe------ccceEEEEEecCCCcHHH-cch----------------hhHHHHHHHHHHHHHHHHHC---
Confidence 84 55555431 135699999999999998 521 12346999999999999999
Q ss_pred CcEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCC----------CCCCcccchHH
Q 042075 846 PIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLG----------SEVSINGDVYS 913 (1033)
Q Consensus 846 ~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDvwS 913 (1033)
||+||||||+||+++ ++.+||+|||+|+ .+..|+|||++.. ..|...+|+|.
T Consensus 213 giiHrDlkp~NILl~-~~~vkl~DFG~a~---------------~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 213 GIVHGDLSQYNVLVS-EEGIWIIDFPQSV---------------EVGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp TEECSCCSTTSEEEE-TTEEEECCCTTCE---------------ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCEeCCCCHHHEEEE-CCcEEEEECCCCe---------------ECCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999999999999 9999999999997 3455788988643 34555566654
No 347
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=3.7e-24 Score=245.14 Aligned_cols=252 Identities=19% Similarity=0.237 Sum_probs=162.5
Q ss_pred ccccccCcceeeecccccCCCCccc----cccccCcccEEEccCC---CCCccCCccc-------cCCCCCCEEEcccCc
Q 042075 349 SLTNATRLKWFHININNFGGLLPAC----ISNFSTTLEVLLLDSN---KIFGNIPAAF-------GKFVKLLRLEMWNNR 414 (1033)
Q Consensus 349 ~l~~~~~L~~l~l~~n~l~~~ip~~----~~~~~~~L~~L~L~~N---~i~~~~p~~~-------~~l~~L~~L~L~~N~ 414 (1033)
.+..+++|+.|+++.|.+++..+.. +.. .++|+.|+|++| ++++.+|..+ ..+++|++|+|++|+
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~-~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIAS-KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTT-CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHh-CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3455666777777777766553333 222 256677777664 3334445444 566667777777777
Q ss_pred ccc----cCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCCCCcccEEecCCCccC-CC
Q 042075 415 LSG----TIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLT-GT 489 (1033)
Q Consensus 415 l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ 489 (1033)
+++ .+|..+..+++|++|+|++|.+++..+..+... +. .+..|.+.+. .++|++|+|++|+++ +.
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~--~l~~~~~~~~-------~~~L~~L~L~~n~l~~~~ 175 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA-LQ--ELAVNKKAKN-------APPLRSIICGRNRLENGS 175 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-HH--HHHHHHHHHT-------CCCCCEEECCSSCCTGGG
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-HH--HHhhhhhccc-------CCCCcEEECCCCCCCcHH
Confidence 665 355666666777777777776654333333221 00 0000111100 045555555555554 22
Q ss_pred CC---ccccCchhHHhhhhccCcccc--C---CcCCccccccccceEEccccccc----cccCcccccccccceeecccc
Q 042075 490 IP---PQLLGLSSLLIVLELSRNQLT--G---PIPNEVGNLKNLEMLNVFENKLR----GEIPRTLGSCIKLELLQMQGN 557 (1033)
Q Consensus 490 ~p---~~~~~~~~ll~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N 557 (1033)
+| ..+..+..+ +.|++++|+++ | ..|..+..+++|+.|+|++|+++ +.+|..+..+++|++|+|++|
T Consensus 176 ~~~l~~~l~~~~~L-~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n 254 (386)
T 2ca6_A 176 MKEWAKTFQSHRLL-HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDC 254 (386)
T ss_dssp HHHHHHHHHHCTTC-CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTC
T ss_pred HHHHHHHHHhCCCc-CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCC
Confidence 22 122223333 55555555554 2 34557888999999999999996 678889999999999999999
Q ss_pred cccCc----ccccc--cCcccCCccccccccccc----cCCccc-ccccccceeecCCCcCcccCC
Q 042075 558 FLQGP----IPSSL--SSLRGLSVLDLSQNNLSG----KIPEFL-VGFQLLEYLNLSNNDFEGMVP 612 (1033)
Q Consensus 558 ~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~g~~p 612 (1033)
++++. +|..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|+|++|++++..|
T Consensus 255 ~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 255 LLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99876 67777 449999999999999998 588888 678999999999999997554
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=5.7e-22 Score=219.01 Aligned_cols=211 Identities=19% Similarity=0.305 Sum_probs=177.8
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNN 191 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 191 (1033)
.+.+..+.+++.+ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|.+++. +. +..+++|++|+|++|+
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCc
Confidence 3445566666433 3567899999999999998 566 689999999999999999854 44 9999999999999999
Q ss_pred cCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCcc
Q 042075 192 LTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLD 271 (1033)
Q Consensus 192 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 271 (1033)
+++. | .+.++++|++|+|++|++++. +. +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+
T Consensus 97 l~~~-~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-- 168 (308)
T 1h6u_A 97 LKNV-S-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-- 168 (308)
T ss_dssp CSCC-G-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred CCCc-h-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--
Confidence 9864 4 588999999999999999964 43 8999999999999999996544 8899999999999999986444
Q ss_pred ccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCC
Q 042075 272 IGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGE 340 (1033)
Q Consensus 272 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~ 340 (1033)
+..+++|++|+|++|++++..+ +..+++|++|++++|++++.++ +..+++|+.|++++|.+...+
T Consensus 169 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 169 -LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCC
T ss_pred -hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCC
Confidence 5578999999999999986544 8899999999999999998765 788899999999999887644
No 349
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=2.3e-24 Score=246.82 Aligned_cols=205 Identities=20% Similarity=0.264 Sum_probs=154.5
Q ss_pred CcccEEEccCCCCCc----cCCccccCCCCCCEEEcccCcccccCChhhhc----C---------CCCcEEEccccccc-
Q 042075 379 TTLEVLLLDSNKIFG----NIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGE----L---------QNLRELRLQENRFL- 440 (1033)
Q Consensus 379 ~~L~~L~L~~N~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~l~- 440 (1033)
++|++|+|++|.+++ .+|..+.++++|++|+|++|.++...+..+.. + ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 689999999999987 57888999999999999999997555444444 4 89999999999997
Q ss_pred cccC---cccccce-eceeeccccccC--C---CCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccc
Q 042075 441 GNIP---PSIGNLK-LFNLQLSYNFLQ--G---SIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQL 511 (1033)
Q Consensus 441 ~~~p---~~~~~l~-L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l 511 (1033)
+.+| ..+..++ |++|+|++|.++ | ..|..+..+++|++|+|++|+++.. +
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~------g--------------- 232 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL------G--------------- 232 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH------H---------------
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcH------H---------------
Confidence 3444 3455554 777777777776 2 3444667777777777777776410 0
Q ss_pred cCCcCCccccccccceEEccccccccc----cCccc--ccccccceeecccccccC----cccccc-cCcccCCcccccc
Q 042075 512 TGPIPNEVGNLKNLEMLNVFENKLRGE----IPRTL--GSCIKLELLQMQGNFLQG----PIPSSL-SSLRGLSVLDLSQ 580 (1033)
Q Consensus 512 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~ 580 (1033)
.+.+|..+..+++|+.|+|++|++++. +|..+ +.+++|++|+|++|++++ .+|..+ .++++|+.|+|++
T Consensus 233 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~ 312 (386)
T 2ca6_A 233 SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNG 312 (386)
T ss_dssp HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccC
Confidence 023556677788999999999999866 56666 448999999999999997 488888 6789999999999
Q ss_pred ccccccCC--cccc-cccccceeecCC
Q 042075 581 NNLSGKIP--EFLV-GFQLLEYLNLSN 604 (1033)
Q Consensus 581 N~l~~~~p--~~~~-~l~~L~~L~ls~ 604 (1033)
|++++..| ..+. .++.++.+++..
T Consensus 313 N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 313 NRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp SBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred CcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 99998774 3333 456666555544
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1e-21 Score=221.27 Aligned_cols=121 Identities=21% Similarity=0.251 Sum_probs=56.6
Q ss_pred EEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCC-CCCCCCCCCcE-EEccc
Q 042075 136 VLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIP-PSFGNLSSISF-LFLSR 213 (1033)
Q Consensus 136 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~ 213 (1033)
+++.++|+++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4444555554 444443 2345555555555553223345555555555555555443333 23445544432 33444
Q ss_pred CcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEec
Q 042075 214 NNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDA 259 (1033)
Q Consensus 214 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 259 (1033)
|+|++..|+.|..+++|++|++++|++++..+..+....++..|++
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 5555444555555555555555555555333333333333444444
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.85 E-value=6.6e-23 Score=252.12 Aligned_cols=261 Identities=20% Similarity=0.179 Sum_probs=125.8
Q ss_pred CChhhHHHHHHHHHhcccCCCCCCCCCCC-CCCCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCC-----
Q 042075 38 GNETDRLALLEFKSKITHDPLGVFGSWNE-SIHFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLK----- 111 (1033)
Q Consensus 38 ~~~~~~~aLl~~k~~~~~~~~~~~~~W~~-~~~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~----- 111 (1033)
..+.++++|+++..+...+.+..-..|.. .+..+.|.+++++. .+|+.++|.++++... +..+.....|.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~ 204 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST---PLTPKIELFANGKDEA-NQALLQHKKLSQYSID 204 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC---CccceEEeeCCCCCcc-hhhHhhcCccCccccc
Confidence 45678999999999886555555667754 45678999999875 4799999998888763 33332222222
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNN 191 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 191 (1033)
.++++.|.+. ..|..|..+++|+.|+|++|.++ .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+
T Consensus 205 ~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 205 EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 2223333333 45677888888888888888887 77777778888888888888888 788888888888888888888
Q ss_pred cCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCc-eeEEeccCccccCccCc
Q 042075 192 LTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISS-ITVFDAGINQIQGVIPL 270 (1033)
Q Consensus 192 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~ls~N~l~~~~p~ 270 (1033)
|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++.+|..+..+.. +..++|++|.+++.+|.
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 88 66888888888888888888887 67777888888888888888888877777765432 23466777777766654
Q ss_pred cccccccccceeeeccc--------ccCCCCCccCcCCCCcccccccccccc
Q 042075 271 DIGFTLQNLQFFSVGRN--------QLTGAIPPAISNASNLEVFQVNSNKLT 314 (1033)
Q Consensus 271 ~~~~~l~~L~~L~L~~N--------~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (1033)
.|+.|++++| .+.+..+..+..+.++....+++|-+.
T Consensus 360 -------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 360 -------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -------C-----------------------------------------CCC
T ss_pred -------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 3455666665 333333333444444555555555543
No 352
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.4e-22 Score=227.39 Aligned_cols=235 Identities=14% Similarity=0.148 Sum_probs=117.7
Q ss_pred cccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCc-CCccccccCCCCcccccccccCCCCcccccCCCceeEEe
Q 042075 180 SKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGS-IPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFD 258 (1033)
Q Consensus 180 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 258 (1033)
++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4444444554444444333 23445555555555554433 444445555555555555555444444444455555555
Q ss_pred ccCc-cccCccCccccccccccceeeeccc-ccCCC-CCccCcCCC-Ccccccccccc--ccCcCcchhhhccccceeee
Q 042075 259 AGIN-QIQGVIPLDIGFTLQNLQFFSVGRN-QLTGA-IPPAISNAS-NLEVFQVNSNK--LTGEVPYLEKLQRLSHFVIT 332 (1033)
Q Consensus 259 ls~N-~l~~~~p~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N~--l~~~~~~l~~l~~L~~L~l~ 332 (1033)
+++| .+++......+..+++|++|++++| .+++. ++..+..++ +|++|++++|. +++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~---------------- 212 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS---------------- 212 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHH----------------
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHH----------------
Confidence 5554 3332111111223445555555555 44432 344445555 55555555553 2210
Q ss_pred cCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCC-CCccCCccccCCCCCCEEEcc
Q 042075 333 RNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNK-IFGNIPAAFGKFVKLLRLEMW 411 (1033)
Q Consensus 333 ~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~L~ 411 (1033)
.+|..+.. .++|+.|++++|. +++..+..+.++++|++|+++
T Consensus 213 ------------------------------------~l~~~~~~-~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~ 255 (336)
T 2ast_B 213 ------------------------------------DLSTLVRR-CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS 255 (336)
T ss_dssp ------------------------------------HHHHHHHH-CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred ------------------------------------HHHHHHhh-CCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCC
Confidence 01111111 1456666666666 555566677777777778877
Q ss_pred cCc-ccccCChhhhcCCCCcEEEccccccccccCcccccc-e-eceeeccccccCCCCCCccCC
Q 042075 412 NNR-LSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNL-K-LFNLQLSYNFLQGSIPSSLGQ 472 (1033)
Q Consensus 412 ~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~-L~~L~Ls~N~l~~~~p~~~~~ 472 (1033)
+|. +.......+..+++|+.|+|++| ++ ...+..+ . +..|++++|++++..|..++.
T Consensus 256 ~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 256 RCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 774 22222225677778888888777 22 2233333 2 566666666666666665543
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.9e-21 Score=230.29 Aligned_cols=189 Identities=28% Similarity=0.360 Sum_probs=139.2
Q ss_pred cccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccc
Q 042075 380 TLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSY 459 (1033)
Q Consensus 380 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~ 459 (1033)
+++.|++++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.. .|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~-~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA-SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT-TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc-CCCEEECCC
Confidence 56777777777776 454442 67778888888777 455 446778888888888775 666 554 677888888
Q ss_pred cccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcccccccccc
Q 042075 460 NFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEI 539 (1033)
Q Consensus 460 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 539 (1033)
|.|++ +|. .+++|++|+|++|+|++ +|. .+.++ +.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L-~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSL-EVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTC-CEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCc-CEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 88876 555 57788888888888884 665 23344 778888888885 666 65 78888888888888 66
Q ss_pred Cccccccccc-------ceeecccccccCcccccccCcccCCccccccccccccCCcccccccc
Q 042075 540 PRTLGSCIKL-------ELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQL 596 (1033)
Q Consensus 540 p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 596 (1033)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 76 655 67 88888888888 67888888888888888888888888888877654
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=6.7e-21 Score=200.66 Aligned_cols=166 Identities=23% Similarity=0.298 Sum_probs=123.6
Q ss_pred CCCCCCCCCCcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecc
Q 042075 61 FGSWNESIHFCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALH 140 (1033)
Q Consensus 61 ~~~W~~~~~~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 140 (1033)
..-|..+.+.|+|.+|.|+... ++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 9 ~~~~~~~~~~Cs~~~v~c~~~~-------------l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 72 (229)
T 3e6j_A 9 HSAACPSQCSCSGTTVDCRSKR-------------HA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLG 72 (229)
T ss_dssp --CCCCTTCEEETTEEECTTSC-------------CS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred hhccCCCCCEEeCCEeEccCCC-------------cC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECC
Confidence 3355556789999999997542 22 4454443 778888888888887778888888888888888
Q ss_pred cCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcC
Q 042075 141 NNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSI 220 (1033)
Q Consensus 141 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 220 (1033)
+|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..
T Consensus 73 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 73 SNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred CCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 88887555566778888888888888888666666777888888888888887 66777777788888888888887666
Q ss_pred CccccccCCCCcccccccccCCC
Q 042075 221 PDTFGWLKNLVNLTMAQNRLSGT 243 (1033)
Q Consensus 221 p~~~~~l~~L~~L~L~~N~l~~~ 243 (1033)
+..|..+++|+.|+|++|++.+.
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCCccCC
Confidence 66777777777777777777643
No 355
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=4.4e-20 Score=191.51 Aligned_cols=180 Identities=19% Similarity=0.171 Sum_probs=106.1
Q ss_pred cEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeecccc
Q 042075 382 EVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYN 460 (1033)
Q Consensus 382 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N 460 (1033)
+.++++++.++.. |..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..++ |++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 3556666666533 3332 34667777777777765555666777777777777776644444445444 555555555
Q ss_pred ccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccC
Q 042075 461 FLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIP 540 (1033)
Q Consensus 461 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 540 (1033)
.+++..+..|..+++|++|+|++|+++ +..+..|..+++|+.|+|++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQ-------------------------SLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCc-------------------------ccCHhHhccCCcCCEEECCCCccceeCH
Confidence 555444455556666666666666555 2223334555666666666666665444
Q ss_pred cccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccc
Q 042075 541 RTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQL 596 (1033)
Q Consensus 541 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 596 (1033)
..|..+++|++|++++|.+.+ .+++|+.|+++.|+++|.+|+.++.++.
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 456666666666666666553 3345666666666666666666665543
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=8e-21 Score=198.64 Aligned_cols=183 Identities=17% Similarity=0.145 Sum_probs=138.0
Q ss_pred eceeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCcc-ccCchhHHhhhhccCccccCCcCCccccccccceEEc
Q 042075 452 LFNLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQ-LLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNV 530 (1033)
Q Consensus 452 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 530 (1033)
-+.+++++|.++ .+|..+. +.+++|+|++|+|++..|.. +..+..+ +.|+|++|+|++..|..|..+++|+.|+|
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L-~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQL-RKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCC-CEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 345666666665 3454442 34567777777777443433 3444444 77777777777666778899999999999
Q ss_pred cccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCccc
Q 042075 531 FENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGM 610 (1033)
Q Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 610 (1033)
++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999988888899999999999999999988899999999999999999999988899999999999999999999998
Q ss_pred CCCcccccccccccccccccccCCcccc
Q 042075 611 VPTEGVFRNASITSVLGNLKLCGGTHEF 638 (1033)
Q Consensus 611 ~p~~~~~~~~~~~~~~~n~~lcg~~~~~ 638 (1033)
.+......+............|+.|...
T Consensus 169 c~l~~l~~~~~~~~~~~~~~~C~~P~~l 196 (220)
T 2v70_A 169 CYLAWLGEWLRKKRIVTGNPRCQKPYFL 196 (220)
T ss_dssp GGGHHHHHHHHHSCCBCCCCEEEESGGG
T ss_pred CchHHHHHHHHhcCccccCCccCCChHH
Confidence 8765443333322222233467777544
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=7.3e-20 Score=191.30 Aligned_cols=155 Identities=21% Similarity=0.315 Sum_probs=118.7
Q ss_pred cceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCc
Q 042075 71 CQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPA 150 (1033)
Q Consensus 71 c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 150 (1033)
|.|..|.|... +++ .+|..+. +.|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|.
T Consensus 11 C~~~~v~c~~~-------------~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 74 (220)
T 2v9t_B 11 CSNNIVDCRGK-------------GLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPD 74 (220)
T ss_dssp EETTEEECTTS-------------CCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTT
T ss_pred ECCCEEEcCCC-------------CcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHH
Confidence 67777777643 333 3454443 6788888888888876666788888888888888888877788
Q ss_pred cccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCC
Q 042075 151 NISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNL 230 (1033)
Q Consensus 151 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 230 (1033)
.|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..++.|..+++|
T Consensus 75 ~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 75 AFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 88888888888888888885555567778888888888888887777778888888888888888887777777777777
Q ss_pred CcccccccccC
Q 042075 231 VNLTMAQNRLS 241 (1033)
Q Consensus 231 ~~L~L~~N~l~ 241 (1033)
++|+|++|++.
T Consensus 155 ~~L~L~~N~~~ 165 (220)
T 2v9t_B 155 QTMHLAQNPFI 165 (220)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEeCCCCcC
Confidence 77777777765
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=2e-22 Score=240.20 Aligned_cols=202 Identities=18% Similarity=0.185 Sum_probs=162.6
Q ss_pred CCCCCCCEEEecCCCccccCCccccccccccEEecccCC-------------CCCCCCccccCCCCCcEEE-cccccccC
Q 042075 105 GNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNS-------------IGGEIPANISSCSNLIRVR-LSSNELVG 170 (1033)
Q Consensus 105 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 170 (1033)
...++|+.|+|++|+++ .+|.++++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 66788888899988887 788888888889888887764 5566777777778887777 666644
Q ss_pred CCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccC
Q 042075 171 KIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFN 250 (1033)
Q Consensus 171 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 250 (1033)
.+|+.+.+++|.++...+. .|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..+.+
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 3566667777777743322 48899999999986 676 899999999999999999 78889999
Q ss_pred CCceeEEeccCccccCccCccccccccccceeeecccccCCCC-CccCcCCCCccccccccccccCcCcchhh----hcc
Q 042075 251 ISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAI-PPAISNASNLEVFQVNSNKLTGEVPYLEK----LQR 325 (1033)
Q Consensus 251 l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~----l~~ 325 (1033)
+++|+.|+|++|+|++ +| .+..+++|++|+|++|+|++.. |..+..+++|+.|+|++|++++.+|.... +++
T Consensus 485 l~~L~~L~Ls~N~l~~-lp--~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~ 561 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTT
T ss_pred CCCCCEEECCCCCCCC-Cc--ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcc
Confidence 9999999999999986 66 3557899999999999999887 99999999999999999999998876433 455
Q ss_pred cccee
Q 042075 326 LSHFV 330 (1033)
Q Consensus 326 L~~L~ 330 (1033)
|+.|+
T Consensus 562 L~~L~ 566 (567)
T 1dce_A 562 VSSIL 566 (567)
T ss_dssp CSEEE
T ss_pred cCccC
Confidence 55553
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.8e-19 Score=188.27 Aligned_cols=153 Identities=22% Similarity=0.322 Sum_probs=132.9
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 190 (1033)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46788889888 6777665 68999999999999777778999999999999999999888899999999999999999
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccC
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQG 266 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 266 (1033)
+|++..+..|.++++|++|+|++|+|++..|+.|..+++|++|+|++|+|++..+..+..+++|+.|++++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9997666778899999999999999998888999999999999999999997777778888888888888887763
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=189.03 Aligned_cols=152 Identities=25% Similarity=0.314 Sum_probs=110.8
Q ss_pred EEcCCCCCCcccccccCCCCCCCEEEecCCCccccCC-ccccccccccEEecccCCCCCCCCccccCCCCCcEEEccccc
Q 042075 89 LDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIP-SEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE 167 (1033)
Q Consensus 89 l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 167 (1033)
+++++++++ .+|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 16 l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 92 (220)
T 2v70_A 16 VDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNR 92 (220)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred eEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCc
Confidence 333444555 3555443 345788888888886644 357788888888888888886666678888888888888888
Q ss_pred ccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCC
Q 042075 168 LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT 243 (1033)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 243 (1033)
+++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.
T Consensus 93 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 93 LENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred cCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 8766666777788888888888888777777777777788888888877777677777777777777777776643
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.3e-19 Score=198.17 Aligned_cols=173 Identities=19% Similarity=0.360 Sum_probs=91.9
Q ss_pred cccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcE
Q 042075 129 DRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISF 208 (1033)
Q Consensus 129 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 208 (1033)
..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +|. +.++++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCE
T ss_pred hhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCE
Confidence 34555555555555554 222 24555555555555555553222 5555555555555555553 222 555555555
Q ss_pred EEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccc
Q 042075 209 LFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQ 288 (1033)
Q Consensus 209 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~ 288 (1033)
|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|++|+|++|+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~---l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---GTTCTTCCEEECCSSC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh---hcCCCccCEEECCCCc
Confidence 55555555532 3455555555555555555533 345555555555555555554333 3345566666666666
Q ss_pred cCCCCCccCcCCCCccccccccccccCc
Q 042075 289 LTGAIPPAISNASNLEVFQVNSNKLTGE 316 (1033)
Q Consensus 289 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 316 (1033)
+++ +| .+..+++|+.|++++|+++..
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 654 22 366666666666666666643
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=1.1e-19 Score=198.77 Aligned_cols=173 Identities=18% Similarity=0.292 Sum_probs=129.9
Q ss_pred CCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccce
Q 042075 105 GNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEY 184 (1033)
Q Consensus 105 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 184 (1033)
..+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 456777888888888774 34 47778888888888888875433 7788888888888888874 33 3778888888
Q ss_pred eeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccc
Q 042075 185 FSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQI 264 (1033)
Q Consensus 185 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l 264 (1033)
|+|++|++++. ..+.++++|++|+|++|++++. ..++.+++|++|+|++|++++..| +..+++|+.|++++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 88888888753 3577788888888888888754 567788888888888888886544 77888888888888888
Q ss_pred cCccCccccccccccceeeecccccCCC
Q 042075 265 QGVIPLDIGFTLQNLQFFSVGRNQLTGA 292 (1033)
Q Consensus 265 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~ 292 (1033)
++ +|. +..+++|++|++++|+++..
T Consensus 191 ~~-l~~--l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 191 SD-LRA--LAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CB-CGG--GTTCTTCSEEEEEEEEEECC
T ss_pred CC-Chh--hccCCCCCEEECcCCcccCC
Confidence 74 342 45688888888888888753
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.1e-19 Score=217.80 Aligned_cols=192 Identities=19% Similarity=0.323 Sum_probs=132.1
Q ss_pred CCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeec
Q 042075 109 FLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVS 188 (1033)
Q Consensus 109 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 188 (1033)
.+..++|+.+.+...++ +..|++|+.|+|++|.++ .+| .+..+++|++|+|++|++++..| +..+++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34455566666654333 456777777777777776 344 46777777777777777775443 7777777777777
Q ss_pred ccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCcc
Q 042075 189 YNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVI 268 (1033)
Q Consensus 189 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 268 (1033)
+|++++ +| .+..+++|++|+|++|+|++ + ..|..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++..
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 777764 33 57777777777777777774 2 3477777777777777777754 56677777777777777777655
Q ss_pred CccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcC
Q 042075 269 PLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEV 317 (1033)
Q Consensus 269 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (1033)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.+
T Consensus 170 ~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 170 P---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp G---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred h---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 5 44677777777777777753 35777888888888888887643
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.9e-19 Score=203.59 Aligned_cols=149 Identities=21% Similarity=0.251 Sum_probs=87.2
Q ss_pred EcCCCCCCcccccccCCCCCCCEEEecCCCccccCCcccc-ccccccEEecccCCCCCCCCccccCCCCCcEEEcccccc
Q 042075 90 DLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFD-RLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNEL 168 (1033)
Q Consensus 90 ~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 168 (1033)
++++++++. +|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 24 ~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l 100 (361)
T 2xot_A 24 SCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL 100 (361)
T ss_dssp ECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcC
Confidence 334444542 444332 3466677777777665555555 666677777777766655555666666666666666666
Q ss_pred cCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccc---cccCCCCcccccccccC
Q 042075 169 VGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTF---GWLKNLVNLTMAQNRLS 241 (1033)
Q Consensus 169 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~ 241 (1033)
++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..| ..+++|++|+|++|+|+
T Consensus 101 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 101 HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 65555556666666666666666665556666666666666666666664333333 33444555555555444
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.5e-19 Score=204.48 Aligned_cols=180 Identities=18% Similarity=0.206 Sum_probs=123.2
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCcccc-CCCCCcEEEcccccccCCCCCCcccccccceeeecc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANIS-SCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSY 189 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 189 (1033)
+.+++++|+++ .+|..+. +.+++|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 47888888887 5776654 3578888888888876666676 788888888888888866667788888888888888
Q ss_pred cccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccC
Q 042075 190 NNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIP 269 (1033)
Q Consensus 190 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 269 (1033)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..+..+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~------------------ 159 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDG------------------ 159 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC--------------------
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCc------------------
Confidence 88887666778888888888888888887777778888888888888887774322222100
Q ss_pred ccccccccccceeeecccccCCCCCccCcCCCC--ccccccccccccC
Q 042075 270 LDIGFTLQNLQFFSVGRNQLTGAIPPAISNASN--LEVFQVNSNKLTG 315 (1033)
Q Consensus 270 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 315 (1033)
..+++|++|+|++|+|++..+..+..+++ ++.|+|++|++..
T Consensus 160 ----~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 160 ----NKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ----ccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 12444444455555554333344444444 3556666666653
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1e-18 Score=183.87 Aligned_cols=154 Identities=25% Similarity=0.275 Sum_probs=124.0
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 190 (1033)
+.++.++++++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45788888887 6776554 78889999999998888888888888999999999887555567788888888888888
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCcc
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVI 268 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 268 (1033)
+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|.+....
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 888777777888888888888888888 67888888888888888888888666666777777777777777776443
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=5.6e-19 Score=211.61 Aligned_cols=185 Identities=18% Similarity=0.254 Sum_probs=144.3
Q ss_pred cCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccc
Q 042075 104 VGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIE 183 (1033)
Q Consensus 104 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 183 (1033)
+..|++|+.|+|++|.+.. +| .|..+++|+.|+|++|.|++..| +..+++|++|+|++|.+++ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 4567788888888888874 44 58888888888888888886544 8888888888888888874 43 688888888
Q ss_pred eeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcc
Q 042075 184 YFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQ 263 (1033)
Q Consensus 184 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 263 (1033)
+|+|++|++++. +.+.++++|+.|+|++|+|++. ..|..+++|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 888888888853 3478888888888888888864 578888888888888888887666 8888888899999888
Q ss_pred ccCccCccccccccccceeeecccccCCCCCccCcCCCCc
Q 042075 264 IQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNL 303 (1033)
Q Consensus 264 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 303 (1033)
|++. | .+..+++|+.|+|++|.+++.....+..+..+
T Consensus 187 i~~l-~--~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~ 223 (605)
T 1m9s_A 187 ISDL-R--ALAGLKNLDVLELFSQECLNKPINHQSNLVVP 223 (605)
T ss_dssp CCBC-G--GGTTCTTCSEEECCSEEEECCCCCCCSSCEEE
T ss_pred CCCC-h--HHccCCCCCEEEccCCcCcCCcccccccEEec
Confidence 8853 3 24568889999999999886544444444333
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=3.2e-19 Score=182.20 Aligned_cols=158 Identities=23% Similarity=0.276 Sum_probs=123.5
Q ss_pred cEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCC-ccccccccceEEccccccccccCcccccccccceeecc
Q 042075 477 TIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPN-EVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQ 555 (1033)
Q Consensus 477 ~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 555 (1033)
+.+++++|+++ .+|..+.. . ++.|++++|+|++..+. .|+.+++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~-l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--H-TTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--T-CSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--C-CCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 56666666665 56655433 2 36677777777755543 47888999999999999998888899999999999999
Q ss_pred cccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCcccccccccccccccccccCCc
Q 042075 556 GNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVFRNASITSVLGNLKLCGGT 635 (1033)
Q Consensus 556 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lcg~~ 635 (1033)
+|+|++..|..|..+++|+.|+|++|+|++.+|..+..+++|++|+|++|+|+|..+......++....+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999888888999999999999999999888999999999999999999999888765444444444556677778777
Q ss_pred ccc
Q 042075 636 HEF 638 (1033)
Q Consensus 636 ~~~ 638 (1033)
...
T Consensus 167 ~~l 169 (192)
T 1w8a_A 167 SKV 169 (192)
T ss_dssp TTT
T ss_pred hHH
Confidence 654
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3e-21 Score=230.03 Aligned_cols=191 Identities=23% Similarity=0.256 Sum_probs=147.1
Q ss_pred cCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccc-------------cccccCcccccce-eceee-ccccccCC
Q 042075 400 GKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENR-------------FLGNIPPSIGNLK-LFNLQ-LSYNFLQG 464 (1033)
Q Consensus 400 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~-L~~L~-Ls~N~l~~ 464 (1033)
...++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..++.++ |+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56778888888888887 678888888888888887765 4556666666665 77776 5666543
Q ss_pred CCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccc
Q 042075 465 SIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLG 544 (1033)
Q Consensus 465 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 544 (1033)
+|+.+.+++|.++ .+|.. . ++.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+
T Consensus 424 ----------~L~~l~l~~n~i~-~l~~~-----~-L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 ----------DLRSKFLLENSVL-KMEYA-----D-VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHH-HHHHT-----T-CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------hhhhhhhhccccc-ccCcc-----C-ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 4555666666665 23321 1 3678888888885 665 888888888888888888 7888888
Q ss_pred cccccceeecccccccCcccccccCcccCCccccccccccccC-CcccccccccceeecCCCcCcccCCCc
Q 042075 545 SCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKI-PEFLVGFQLLEYLNLSNNDFEGMVPTE 614 (1033)
Q Consensus 545 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~ 614 (1033)
++++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..+++|+.|+|++|+|++.+|..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 88888888888888885 67 7888888888888888888776 888888888888888888888877753
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.9e-18 Score=185.29 Aligned_cols=138 Identities=22% Similarity=0.180 Sum_probs=107.1
Q ss_pred CCCccceecccCceeEEEEEeCCCCeE--EEEEEeeccCch------------------------hHHHHHHHHHHHHhc
Q 042075 712 GFTSANLIGAGSFGSVYKGILDEGKTI--VAVKVFNLLHHG------------------------AFKSFIAECNTLKNI 765 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 765 (1033)
-|++.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+.+++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999657888 999997532111 113678999999999
Q ss_pred CCCCc--eeEeeeeccccccCCCceeEEEEcccC-C----chhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHH
Q 042075 766 RHRNL--VKILTACSGVDYQGNDFKALVFEFMHN-R----SLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSY 838 (1033)
Q Consensus 766 ~h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~ 838 (1033)
.|+++ +.++++ +..++||||+.+ | +|.++... .++.++..++.|++.|++|
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~~ 185 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVKR 185 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHHH
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHHH
Confidence 88754 334332 256899999942 4 66665421 2244577899999999999
Q ss_pred HH-hCCCCCcEeccCCCCCeEecCCCcEEEeecccceec
Q 042075 839 LH-HDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFL 876 (1033)
Q Consensus 839 LH-~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~ 876 (1033)
|| +. ||+||||||+|||+++ .++|+|||+|...
T Consensus 186 lH~~~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 186 LYQEA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHHTS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHHC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 99 88 9999999999999988 9999999999864
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=9.6e-19 Score=188.16 Aligned_cols=169 Identities=24% Similarity=0.283 Sum_probs=92.6
Q ss_pred CCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceee
Q 042075 107 LSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFS 186 (1033)
Q Consensus 107 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 186 (1033)
+.++..+++++|.+++ ++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 4445555666666653 22 4556666666666666665 344 45666666666666666663332 66666666666
Q ss_pred ecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccC
Q 042075 187 VSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQG 266 (1033)
Q Consensus 187 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 266 (1033)
|++|++++ +|.. .. ++|++|+|++|++++ ++ .+..+++|++|+|++|++++. | .+..+++|+.|++++|++++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 66666663 2322 22 566666666666664 22 355666666666666666533 2 45555555555555555553
Q ss_pred ccCccccccccccceeeecccccCC
Q 042075 267 VIPLDIGFTLQNLQFFSVGRNQLTG 291 (1033)
Q Consensus 267 ~~p~~~~~~l~~L~~L~L~~N~l~~ 291 (1033)
. ..+..+++|++|++++|.+++
T Consensus 165 ~---~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 165 T---GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C---TTSTTCCCCCEEEEEEEEEEC
T ss_pred h---HHhccCCCCCEEeCCCCcccC
Confidence 3 222344555555555555543
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2e-18 Score=185.69 Aligned_cols=167 Identities=16% Similarity=0.241 Sum_probs=142.3
Q ss_pred EEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEccc
Q 042075 86 VTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSS 165 (1033)
Q Consensus 86 v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 165 (1033)
++.+++.++.+++.. .+..+++|++|++++|+++ .+| .+..+++|++|+|++|+|++..| +.++++|++|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 344566667776433 5778999999999999998 566 79999999999999999996544 99999999999999
Q ss_pred ccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCc
Q 042075 166 NELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIP 245 (1033)
Q Consensus 166 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 245 (1033)
|++++ +|.... ++|++|+|++|++++. + .+.++++|++|+|++|+|++. + .++.+++|++|+|++|++++.
T Consensus 95 N~l~~-l~~~~~--~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 95 NRLKN-LNGIPS--ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SCCSC-CTTCCC--SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CccCC-cCcccc--CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 99985 554333 9999999999999964 4 589999999999999999964 4 799999999999999999976
Q ss_pred ccccCCCceeEEeccCccccCc
Q 042075 246 SSIFNISSITVFDAGINQIQGV 267 (1033)
Q Consensus 246 ~~l~~l~~L~~L~ls~N~l~~~ 267 (1033)
..+..+++|+.|++++|.+.+.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 7788999999999999999854
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=3.2e-18 Score=175.66 Aligned_cols=131 Identities=15% Similarity=0.293 Sum_probs=69.8
Q ss_pred cccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcE
Q 042075 129 DRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISF 208 (1033)
Q Consensus 129 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 208 (1033)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..|+++++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555555555555555 444 4555555555555555443 2234555555566666655555545555555556666
Q ss_pred EEcccCcCCCcCCccccccCCCCcccccccc-cCCCCcccccCCCceeEEeccCcccc
Q 042075 209 LFLSRNNLDGSIPDTFGWLKNLVNLTMAQNR-LSGTIPSSIFNISSITVFDAGINQIQ 265 (1033)
Q Consensus 209 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~ls~N~l~ 265 (1033)
|+|++|++++..|..|+.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 6666666555555555555555555555555 33 333 3444444444444444443
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=4.6e-19 Score=217.99 Aligned_cols=179 Identities=26% Similarity=0.255 Sum_probs=84.5
Q ss_pred cccEEEccCCCCCccCCccccCCCCCC-----EEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-ec
Q 042075 380 TLEVLLLDSNKIFGNIPAAFGKFVKLL-----RLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LF 453 (1033)
Q Consensus 380 ~L~~L~L~~N~i~~~~p~~~~~l~~L~-----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~ 453 (1033)
.++.|.|.+|.+... +..+....+|. .++++.|++. ..|..+..+++|+.|+|++|++. .+|..+..++ |+
T Consensus 174 ~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 174 LTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLT 250 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCS
T ss_pred ccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCC
Confidence 355566666665542 22221111111 2233344444 45666777777777777777776 5565555555 66
Q ss_pred eeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEcccc
Q 042075 454 NLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFEN 533 (1033)
Q Consensus 454 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 533 (1033)
+|+|++|.|+ .+|..|+.+++|++|+|++|+|+ .+|..+..+.++ ++|+|++|.|+ .+|..|+.+++|+.|+|++|
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L-~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQL-KYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTC-SEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCC-CEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 6666666666 56666666667777777777666 566666555554 56666666665 45555666666666666666
Q ss_pred ccccccCcccccccc-cceeecccccccCcccc
Q 042075 534 KLRGEIPRTLGSCIK-LELLQMQGNFLQGPIPS 565 (1033)
Q Consensus 534 ~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 565 (1033)
+|++.+|..+..+.. +..|+|++|.++|.+|.
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 666655555544322 22355666666665554
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.3e-18 Score=176.68 Aligned_cols=153 Identities=18% Similarity=0.230 Sum_probs=120.8
Q ss_pred CCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccce
Q 042075 105 GNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEY 184 (1033)
Q Consensus 105 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 184 (1033)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45677888888888888 566 6888888888888888765 3457888888888888888888777888888888888
Q ss_pred eeecccccCCCCCCCCCCCCCCcEEEcccCc-CCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCcc
Q 042075 185 FSVSYNNLTGSIPPSFGNLSSISFLFLSRNN-LDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQ 263 (1033)
Q Consensus 185 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 263 (1033)
|++++|++++..|..|+++++|++|+|++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 8888888887777778888888888888887 65 455 68888888889998888885 33 66777777777777777
Q ss_pred cc
Q 042075 264 IQ 265 (1033)
Q Consensus 264 l~ 265 (1033)
|.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 65
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=8.3e-18 Score=171.65 Aligned_cols=130 Identities=22% Similarity=0.358 Sum_probs=83.6
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCc-cccCCCCCcEEEcccccccCCCCCCcccccccceeeecc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPA-NISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSY 189 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 189 (1033)
+++++++|+++ .+|..+.. +|++|+|++|+|++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56677777775 56655543 667777777777644443 366666666666666666666666666666666666666
Q ss_pred cccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCC
Q 042075 190 NNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT 243 (1033)
Q Consensus 190 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 243 (1033)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 666666666666666666666666666666666666666666666666666543
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.8e-17 Score=169.06 Aligned_cols=159 Identities=21% Similarity=0.254 Sum_probs=118.9
Q ss_pred cEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccccceeeccc
Q 042075 477 TIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQG 556 (1033)
Q Consensus 477 ~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 556 (1033)
+.+++++|+++ .+|..+. ..++.|++++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 45666666666 5665443 22367777777777 5677888889999999999999987778899999999999999
Q ss_pred ccccCcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCcccCCCcccccccccccccccccccCCcc
Q 042075 557 NFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGMVPTEGVFRNASITSVLGNLKLCGGTH 636 (1033)
Q Consensus 557 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lcg~~~ 636 (1033)
|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...-.+...+........+...|..|.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~~~~~~~~C~~P~ 167 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 167 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSSCCCSCCBEEESG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhccCCCCCcCcCCch
Confidence 99998888889999999999999999997666678899999999999999988665432222222222223335677776
Q ss_pred ccCC
Q 042075 637 EFRL 640 (1033)
Q Consensus 637 ~~~~ 640 (1033)
..+.
T Consensus 168 ~l~g 171 (193)
T 2wfh_A 168 EMAD 171 (193)
T ss_dssp GGTT
T ss_pred HHCC
Confidence 6543
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.1e-17 Score=162.76 Aligned_cols=134 Identities=19% Similarity=0.173 Sum_probs=106.2
Q ss_pred CCCCCCEEEecCCCcc-ccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccce
Q 042075 106 NLSFLKVLDLHNNSFH-HEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEY 184 (1033)
Q Consensus 106 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 184 (1033)
..++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3477888888888887 77888888888888888888888854 77888888888888888888767777777888888
Q ss_pred eeecccccCCCC-CCCCCCCCCCcEEEcccCcCCCcCC---ccccccCCCCcccccccccC
Q 042075 185 FSVSYNNLTGSI-PPSFGNLSSISFLFLSRNNLDGSIP---DTFGWLKNLVNLTMAQNRLS 241 (1033)
Q Consensus 185 L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 241 (1033)
|+|++|++++.. +..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 888888888543 2567788888888888888885544 46777888888888887776
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.9e-17 Score=184.66 Aligned_cols=299 Identities=11% Similarity=0.077 Sum_probs=180.4
Q ss_pred CcccccccCC--CCCCCEEEecCCCccccCCccccc-cccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCC
Q 042075 97 AGYISAHVGN--LSFLKVLDLHNNSFHHEIPSEFDR-LRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIP 173 (1033)
Q Consensus 97 ~g~~~~~~~~--l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 173 (1033)
.|.++..+.. +.+++.|.++++ +.+.--..+.. +++|++|||++|+|+ .....-+.++.+..+.+..|.+. +
T Consensus 12 ~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~-~~~~~~~~~~~~~~~~~~~~~I~---~ 86 (329)
T 3sb4_A 12 PGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIK-MYSGKAGTYPNGKFYIYMANFVP---A 86 (329)
T ss_dssp TTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEEC-CEEESSSSSGGGCCEEECTTEEC---T
T ss_pred CCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeE-EecCccccccccccccccccccC---H
Confidence 3455554443 667888888764 22111122333 667888888888876 11111122233455555555332 3
Q ss_pred CCccc--------ccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCccccccccc----C
Q 042075 174 SELGS--------LSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRL----S 241 (1033)
Q Consensus 174 ~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~ 241 (1033)
..|.+ +++|+.|+|.+ +++.+.+..|.++++|+.|++++|.+....+.+|..+.++..+.+..+.. .
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 45556 77888888877 77756666777777788888887777766677777766666666554321 2
Q ss_pred CCCcccccCCCcee-EEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcch
Q 042075 242 GTIPSSIFNISSIT-VFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYL 320 (1033)
Q Consensus 242 ~~~p~~l~~l~~L~-~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l 320 (1033)
...+..+.++.+|+ .++++... .++..++ ..-....++..+.+.++-......
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~---------------------~~~~~~~~~~~l~~~~~l~~~~~~-- 219 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMG---KLEDEIM---------------------KAGLQPRDINFLTIEGKLDNADFK-- 219 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTC---CHHHHHH---------------------HTTCCGGGCSEEEEEECCCHHHHH--
T ss_pred cccccccccccccceeEEecCCC---cHHHHHh---------------------hcccCccccceEEEeeeecHHHHH--
Confidence 22233344444444 22222111 1111110 000112233333333221110000
Q ss_pred hhhccccceeeecCcCCCCCCccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCcccc
Q 042075 321 EKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFG 400 (1033)
Q Consensus 321 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~ 400 (1033)
.+....++|+.+++++|+++.+.+.+|.
T Consensus 220 ----------------------------------------------------~l~~~~~~L~~l~L~~n~i~~I~~~aF~ 247 (329)
T 3sb4_A 220 ----------------------------------------------------LIRDYMPNLVSLDISKTNATTIPDFTFA 247 (329)
T ss_dssp ----------------------------------------------------HHHHHCTTCCEEECTTBCCCEECTTTTT
T ss_pred ----------------------------------------------------HHHHhcCCCeEEECCCCCcceecHhhhh
Confidence 0001125778888888888888888899
Q ss_pred CCCCCCEEEcccCcccccCChhhhcCCCCc-EEEccccccccccCcccccce-eceeeccccccCCCCCCccCCCCcccE
Q 042075 401 KFVKLLRLEMWNNRLSGTIPPAIGELQNLR-ELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQSETLTI 478 (1033)
Q Consensus 401 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 478 (1033)
++++|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ +++...+..|.++. |+.+++++|.++...+.+|.++++|+.
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 9999999999888 7777778899999998 999988 67766678888887 999999899998888889999999998
Q ss_pred Eec
Q 042075 479 IDL 481 (1033)
Q Consensus 479 L~L 481 (1033)
++.
T Consensus 326 ly~ 328 (329)
T 3sb4_A 326 IYK 328 (329)
T ss_dssp EEC
T ss_pred hcc
Confidence 864
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=3e-16 Score=157.95 Aligned_cols=135 Identities=21% Similarity=0.296 Sum_probs=95.6
Q ss_pred CcceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCC
Q 042075 70 FCQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIP 149 (1033)
Q Consensus 70 ~c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 149 (1033)
.|+|.+|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..+
T Consensus 6 ~C~~~~l~~~~~-------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 6 SCSGTEIRCNSK-------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp EEETTEEECCSS-------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred EeCCCEEEecCC-------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 478999999754 222 233322 3577888888888876666667778888888888888876555
Q ss_pred ccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcC
Q 042075 150 ANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSI 220 (1033)
Q Consensus 150 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 220 (1033)
..|+++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+.+..
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 66677778888888888777666666777777777777777777655555677777777777777776543
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=2.6e-16 Score=160.50 Aligned_cols=107 Identities=26% Similarity=0.367 Sum_probs=51.1
Q ss_pred CCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeec
Q 042075 109 FLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVS 188 (1033)
Q Consensus 109 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 188 (1033)
.|++|+|++|+|+ .+|..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555554 444455555555555555555554444444445555555555554444444444444444444444
Q ss_pred ccccCCCCCCCCCCCCCCcEEEcccCcC
Q 042075 189 YNNLTGSIPPSFGNLSSISFLFLSRNNL 216 (1033)
Q Consensus 189 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l 216 (1033)
+|+|++..+..|.++++|++|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 4444433333344444444444444444
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=159.76 Aligned_cols=132 Identities=22% Similarity=0.215 Sum_probs=78.6
Q ss_pred ccccEEecccCCCC-CCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEE
Q 042075 132 RRLQVLALHNNSIG-GEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLF 210 (1033)
Q Consensus 132 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 210 (1033)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56667777777766 56666666666666666666666643 5566666666666666666655555555566666666
Q ss_pred cccCcCCCcC-CccccccCCCCcccccccccCCCCc---ccccCCCceeEEeccCcccc
Q 042075 211 LSRNNLDGSI-PDTFGWLKNLVNLTMAQNRLSGTIP---SSIFNISSITVFDAGINQIQ 265 (1033)
Q Consensus 211 L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~ls~N~l~ 265 (1033)
|++|+|++.. +..|..+++|++|++++|++++..+ ..+..+++|+.|+++.|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666666422 1455566666666666666654333 24444555555555444443
No 383
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=7.5e-17 Score=179.86 Aligned_cols=288 Identities=12% Similarity=0.085 Sum_probs=179.8
Q ss_pred ccccccEEecccCCCCCCCCccccC-CCCCcEEEccccccc--CCCCCCcccccccceeeecccccCCCCCCCCCC----
Q 042075 130 RLRRLQVLALHNNSIGGEIPANISS-CSNLIRVRLSSNELV--GKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGN---- 202 (1033)
Q Consensus 130 ~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 202 (1033)
.+.+++.|.++++ +.+.--..+.. +++|++|||++|++. ...+.. ++.++.+.+..|.+ .+..|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhcccccc
Confidence 3678888888864 22111122333 677888888888887 222222 23355566665533 2455666
Q ss_pred ----CCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccCccccCccCccccccccc
Q 042075 203 ----LSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQN 278 (1033)
Q Consensus 203 ----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~ 278 (1033)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++...+..|.++.++..+.++.+...
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~------------- 161 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY------------- 161 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH-------------
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh-------------
Confidence 77788888777 777666667777777777777777777555556666655555554442211
Q ss_pred cceeeecccccCCCCCccCcCCCCcc-ccccccccccCcCcchhhhccccceeeecCcCCCCCCccchhhcccccccCcc
Q 042075 279 LQFFSVGRNQLTGAIPPAISNASNLE-VFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEHRDLNFLCSLTNATRLK 357 (1033)
Q Consensus 279 L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~l~~~~~L~ 357 (1033)
..........|.++.+|+ .+.+....- ....+.. . ...
T Consensus 162 --------~~~~~i~~~~f~~~~~L~~~i~~~~~~~--l~~~~~~-----------~---------------~~~----- 200 (329)
T 3sb4_A 162 --------RFKNRWEHFAFIEGEPLETTIQVGAMGK--LEDEIMK-----------A---------------GLQ----- 200 (329)
T ss_dssp --------HTSTTTTTSCEEESCCCEEEEEECTTCC--HHHHHHH-----------T---------------TCC-----
T ss_pred --------hccccccccccccccccceeEEecCCCc--HHHHHhh-----------c---------------ccC-----
Confidence 011112233445555555 333322110 0000000 0 000
Q ss_pred eeeecccccCCCCccccccccCcccEEEccCCCCCccCCccc-cCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccc
Q 042075 358 WFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAF-GKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQE 436 (1033)
Q Consensus 358 ~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 436 (1033)
..+++.+.+.++- .......+ ..+++|+.|+|++|+++.+.+.+|.++++|+.|+|++
T Consensus 201 --------------------~~~~~~l~~~~~l-~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 201 --------------------PRDINFLTIEGKL-DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp --------------------GGGCSEEEEEECC-CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred --------------------ccccceEEEeeee-cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 0233444444332 11111222 2478999999999999988888999999999999999
Q ss_pred cccccccCcccccce-ec-eeeccccccCCCCCCccCCCCcccEEecCCCccCCCCCc-cccCchhHHhhh
Q 042075 437 NRFLGNIPPSIGNLK-LF-NLQLSYNFLQGSIPSSLGQSETLTIIDLSNNNLTGTIPP-QLLGLSSLLIVL 504 (1033)
Q Consensus 437 N~l~~~~p~~~~~l~-L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~ll~~L 504 (1033)
| ++...+..|.++. |+ .+++.+ .++.+.+.+|.++++|+.|++++|+++ .++. .|.++.++ +.+
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~L-~~l 326 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVPS-KLI 326 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCCC-CEE
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcch-hhh
Confidence 8 7767778899998 99 999999 788788899999999999999999998 5555 55555554 544
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=6.4e-17 Score=157.79 Aligned_cols=128 Identities=20% Similarity=0.191 Sum_probs=79.8
Q ss_pred CCCCCEEEecCCCcc-ccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCccccccccee
Q 042075 107 LSFLKVLDLHNNSFH-HEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYF 185 (1033)
Q Consensus 107 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 185 (1033)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 355666777777666 56666666666677777777666644 556666666666666666665566656566666666
Q ss_pred eecccccCCC-CCCCCCCCCCCcEEEcccCcCCCcCC---ccccccCCCCccccc
Q 042075 186 SVSYNNLTGS-IPPSFGNLSSISFLFLSRNNLDGSIP---DTFGWLKNLVNLTMA 236 (1033)
Q Consensus 186 ~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 236 (1033)
++++|++++. .+..++++++|++|++++|.+++..+ ..|..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666666642 23456666666666666666664443 355556666666554
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=8.2e-16 Score=154.69 Aligned_cols=130 Identities=17% Similarity=0.232 Sum_probs=80.9
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 190 (1033)
+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 45666666666 4454332 56667777777766555555666666666666666666544555666666666666666
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCC
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT 243 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 243 (1033)
++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 66655555566666666666666666655555555666666666666666543
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.4e-16 Score=155.41 Aligned_cols=128 Identities=17% Similarity=0.202 Sum_probs=81.8
Q ss_pred cccccEEecccCCCC-CCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEE
Q 042075 131 LRRLQVLALHNNSIG-GEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFL 209 (1033)
Q Consensus 131 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 209 (1033)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 66777777777777777777777644 566666777777777777766566655566666666
Q ss_pred EcccCcCCCc-CCccccccCCCCcccccccccCCCCc---ccccCCCceeEEecc
Q 042075 210 FLSRNNLDGS-IPDTFGWLKNLVNLTMAQNRLSGTIP---SSIFNISSITVFDAG 260 (1033)
Q Consensus 210 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~ls 260 (1033)
++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666666642 23556666666666666666664433 344555555555543
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=4.8e-16 Score=172.27 Aligned_cols=143 Identities=14% Similarity=0.148 Sum_probs=102.8
Q ss_pred HHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCc--------------hhHHH--------HHHHHHHHH
Q 042075 706 LYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH--------------GAFKS--------FIAECNTLK 763 (1033)
Q Consensus 706 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~ 763 (1033)
+.....-|++.+.||+|++|.||+|.+. +|+.||||+++.... ..... ..+|...+.
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 3334445899999999999999999986 689999999753110 00111 234566666
Q ss_pred hcCCCCc--eeEeeeeccccccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHh
Q 042075 764 NIRHRNL--VKILTACSGVDYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHH 841 (1033)
Q Consensus 764 ~l~h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 841 (1033)
++.+.++ ...+++ ...++||||++|++|.++... .....++.|++.+|.|||+
T Consensus 169 rL~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~----------------~~~~~l~~qll~~l~~lH~ 223 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV----------------PDPASLYADLIALILRLAK 223 (397)
T ss_dssp HHHHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC----------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeeeec---------cCceEEEEecCCccHhhhccc----------------HHHHHHHHHHHHHHHHHHH
Confidence 6644332 222221 134799999999988776521 1235688999999999999
Q ss_pred CCCCCcEeccCCCCCeEecCCC----------cEEEeecccceecC
Q 042075 842 DCQPPIVHCDLKPSNVLLDEEM----------IAHVGDFGLATFLP 877 (1033)
Q Consensus 842 ~~~~~ivHrDlkp~NIll~~~~----------~~kL~DfG~a~~~~ 877 (1033)
. |||||||||.|||+++++ .+.|+||+-+....
T Consensus 224 ~---gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 224 H---GLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp T---TEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred C---CCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9 999999999999998776 38999999887543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.1e-17 Score=171.89 Aligned_cols=135 Identities=24% Similarity=0.322 Sum_probs=78.9
Q ss_pred CCCCCCEEEecCCCccccCCc------cccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccc
Q 042075 106 NLSFLKVLDLHNNSFHHEIPS------EFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSL 179 (1033)
Q Consensus 106 ~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 179 (1033)
....++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555555666666555554 66666666666666666664 55 5666666666666666666 555555556
Q ss_pred cccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCC-ccccccCCCCcccccccccCCCCc
Q 042075 180 SKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIP-DTFGWLKNLVNLTMAQNRLSGTIP 245 (1033)
Q Consensus 180 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p 245 (1033)
++|++|+|++|++++ +| .+.++++|++|+|++|++++..+ +.+..+++|++|++++|++++.+|
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 666666666666664 33 35555666666666666653222 345555555555555555554433
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=2.7e-15 Score=150.71 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=73.5
Q ss_pred cCCCCCCCEEEecCCCccccCCccccccc-cccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCccccccc
Q 042075 104 VGNLSFLKVLDLHNNSFHHEIPSEFDRLR-RLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKI 182 (1033)
Q Consensus 104 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 182 (1033)
+.+.++|++|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..++++++|++|+|++|++++..|..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 445566666666666666 3343 33333 666666666666643 455666666666666666663333333566666
Q ss_pred ceeeecccccCCCCCC--CCCCCCCCcEEEcccCcCCCcCCcc----ccccCCCCcccccccccC
Q 042075 183 EYFSVSYNNLTGSIPP--SFGNLSSISFLFLSRNNLDGSIPDT----FGWLKNLVNLTMAQNRLS 241 (1033)
Q Consensus 183 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 241 (1033)
++|+|++|+++ .+|. .+.++++|++|++++|.++ .+|.. +..+++|++|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 66666666664 3343 4555556666666666655 33442 555555555555555443
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=2.8e-15 Score=150.57 Aligned_cols=133 Identities=19% Similarity=0.246 Sum_probs=86.2
Q ss_pred cccccccccEEecccCCCCCCCCccccCCC-CCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCC
Q 042075 127 EFDRLRRLQVLALHNNSIGGEIPANISSCS-NLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSS 205 (1033)
Q Consensus 127 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 205 (1033)
.+.++.+|++|+|++|.++ .+|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|++++..|..|.++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4566777888888888877 4454 44444 777777777777743 56777777777777777777544444466777
Q ss_pred CcEEEcccCcCCCcCCc--cccccCCCCcccccccccCCCCccc----ccCCCceeEEeccCcccc
Q 042075 206 ISFLFLSRNNLDGSIPD--TFGWLKNLVNLTMAQNRLSGTIPSS----IFNISSITVFDAGINQIQ 265 (1033)
Q Consensus 206 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~ls~N~l~ 265 (1033)
|++|+|++|+|+ .+|. .+..+++|++|++++|+++ .+|.. +..+++|+.||++.|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777777775 3444 6666777777777777766 33442 555555555555555543
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=1.8e-16 Score=162.65 Aligned_cols=133 Identities=25% Similarity=0.275 Sum_probs=93.2
Q ss_pred ccCCCCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCcccccccc
Q 042075 469 SLGQSETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIK 548 (1033)
Q Consensus 469 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 548 (1033)
.+..+++|++|+|++|++++ +| .+..+..+ +.|++++|+++ .+|..+..+++|+.|+|++|++++ +| .+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L-~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~ 116 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENL-RILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVN 116 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTC-CEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCC-CEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCC
Confidence 56666667777777776663 55 44444444 66666666666 456666667788888888888875 45 5778888
Q ss_pred cceeecccccccCccc-ccccCcccCCccccccccccccCCcc----------cccccccceeecCCCcCcc
Q 042075 549 LELLQMQGNFLQGPIP-SSLSSLRGLSVLDLSQNNLSGKIPEF----------LVGFQLLEYLNLSNNDFEG 609 (1033)
Q Consensus 549 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~ls~N~l~g 609 (1033)
|++|++++|++++..+ ..+..+++|+.|++++|++++.+|.. +..+++|+.|| +|+++.
T Consensus 117 L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 8888888888874322 46788888888888888887776653 67788888776 666653
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.52 E-value=1.5e-13 Score=156.38 Aligned_cols=89 Identities=12% Similarity=0.096 Sum_probs=44.8
Q ss_pred CccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccceeceeeccccccCCCCCCccCCCC-
Q 042075 396 PAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLKLFNLQLSYNFLQGSIPSSLGQSE- 474 (1033)
Q Consensus 396 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~- 474 (1033)
+.+|.++++|+.+++. +.++.+...+|.++++|+.++|.+| ++..-+..|.++.|+.+++++|.+....+..|.+++
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~~l~~~~F~~~~~ 370 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPPQVFEKVWYGFPD 370 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCCBCCCSSCCCSCT
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCcccccccccCCCC
Confidence 4455555555555555 2344444455555555555555433 333333444444445555555544444445555553
Q ss_pred cccEEecCCCcc
Q 042075 475 TLTIIDLSNNNL 486 (1033)
Q Consensus 475 ~L~~L~Ls~N~l 486 (1033)
+++.|++..+.+
T Consensus 371 ~l~~l~vp~~~~ 382 (401)
T 4fdw_A 371 DITVIRVPAESV 382 (401)
T ss_dssp TCCEEEECGGGH
T ss_pred CccEEEeCHHHH
Confidence 556666655544
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.51 E-value=1.7e-13 Score=156.00 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=72.4
Q ss_pred CCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCccccc
Q 042075 157 NLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMA 236 (1033)
Q Consensus 157 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 236 (1033)
+|+.++|..| ++..-..+|.+ .+|+.+.+.+ .++.+.+..|.++++|+.++|++|+++.....+|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 3444444433 33222333433 2344444443 33333334444555555555555555433333343 3445555554
Q ss_pred ccccCCCCcccccCCCceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCcccccccccccc
Q 042075 237 QNRLSGTIPSSIFNISSITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLT 314 (1033)
Q Consensus 237 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (1033)
.+ ++..-...|.++++|+.+++..| ++ .++...|.. .+|+.+.+ .|.++...+.+|.++++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 22 43333344445555555555443 22 445555544 56666666 34455455666777777777777666554
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=9.6e-14 Score=138.24 Aligned_cols=104 Identities=25% Similarity=0.346 Sum_probs=64.1
Q ss_pred EEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccc
Q 042075 112 VLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNN 191 (1033)
Q Consensus 112 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 191 (1033)
.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3444444554 3444442 566666666666665556666666666666666666665555556666666666666666
Q ss_pred cCCCCCCCCCCCCCCcEEEcccCcCCC
Q 042075 192 LTGSIPPSFGNLSSISFLFLSRNNLDG 218 (1033)
Q Consensus 192 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 218 (1033)
|++..+..|.++++|++|+|++|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 665555556666666667766666663
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=7.4e-14 Score=139.57 Aligned_cols=104 Identities=23% Similarity=0.330 Sum_probs=72.0
Q ss_pred CEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccc
Q 042075 111 KVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYN 190 (1033)
Q Consensus 111 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 190 (1033)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34566666664 5565553 66777777777777666777777777777777777777554555677777777777777
Q ss_pred ccCCCCCCCCCCCCCCcEEEcccCcCC
Q 042075 191 NLTGSIPPSFGNLSSISFLFLSRNNLD 217 (1033)
Q Consensus 191 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 217 (1033)
+|++..+..|.++++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 777555555777777777777777776
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=9.3e-14 Score=138.36 Aligned_cols=108 Identities=19% Similarity=0.266 Sum_probs=85.1
Q ss_pred cccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEcc
Q 042075 133 RLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLS 212 (1033)
Q Consensus 133 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 212 (1033)
..+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578888888887 5777663 778888888888887777788888888888888888887767777888888888888
Q ss_pred cCcCCCcCCccccccCCCCcccccccccCCC
Q 042075 213 RNNLDGSIPDTFGWLKNLVNLTMAQNRLSGT 243 (1033)
Q Consensus 213 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 243 (1033)
+|+|++..++.|..+++|++|+|++|+++..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 8888876666787888888888888877743
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.6e-13 Score=137.09 Aligned_cols=106 Identities=22% Similarity=0.314 Sum_probs=85.4
Q ss_pred ccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEccc
Q 042075 134 LQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSR 213 (1033)
Q Consensus 134 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 213 (1033)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 367888888886 7787664 7888888888888877788888888888888888888876666678888888888888
Q ss_pred CcCCCcCCccccccCCCCcccccccccCC
Q 042075 214 NNLDGSIPDTFGWLKNLVNLTMAQNRLSG 242 (1033)
Q Consensus 214 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 242 (1033)
|+|++..+..|..+++|++|+|++|++..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 88886666668888888888888888773
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.38 E-value=6.4e-12 Score=143.54 Aligned_cols=309 Identities=11% Similarity=0.029 Sum_probs=167.7
Q ss_pred cccCCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccc
Q 042075 102 AHVGNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSK 181 (1033)
Q Consensus 102 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 181 (1033)
.+|.++++|+.+.|.. .++..-..+|.++++|+.++|.++ ++..-...|.++.+|+.+.+..+ +...-..+|.+...
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 4577788888888864 366444567888888888888755 55344566777888887777654 33244456666554
Q ss_pred cceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEEeccC
Q 042075 182 IEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVFDAGI 261 (1033)
Q Consensus 182 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~ 261 (1033)
++....... .......|.++++|+.+.+.++..+ ....+|.++.+|+.+.+..| ++..-...+.++..|+.+.+..
T Consensus 142 ~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 142 KEITIPEGV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp SEEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccCccc--cccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 443333222 2233456778888888888765433 55667778888888887766 4434455666777777776665
Q ss_pred ccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccccccCcCcchhhhccccceeeecCcCCCCCC
Q 042075 262 NQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSNKLTGEVPYLEKLQRLSHFVITRNSLGSGEH 341 (1033)
Q Consensus 262 N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 341 (1033)
+... +.... ....+|+.+.+..+ ++......+..+.+|+.+.+..+..+-....+.....++.+....+.
T Consensus 218 ~~~~--i~~~~-~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~------ 287 (394)
T 4fs7_A 218 SLYY--LGDFA-LSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVI------ 287 (394)
T ss_dssp TCCE--ECTTT-TTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSE------
T ss_pred CceE--eehhh-cccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCcee------
Confidence 5432 22222 23355666665433 23233445666666666666555433111122222222222222111
Q ss_pred ccchhhcccccccCcceeeecccccCCCCccccccccCcccEEEccCCCCCccCCccccCCCCCCEEEcccCcccccCCh
Q 042075 342 RDLNFLCSLTNATRLKWFHININNFGGLLPACISNFSTTLEVLLLDSNKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPP 421 (1033)
Q Consensus 342 ~~~~~l~~l~~~~~L~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 421 (1033)
++...+....+|+.+.+.++ ++.+...+|.++.+|+.+++.++ ++.+...
T Consensus 288 ----------------------------i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 337 (394)
T 4fs7_A 288 ----------------------------VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKR 337 (394)
T ss_dssp ----------------------------ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred ----------------------------eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHH
Confidence 22222222345555555433 44444555666666666666433 4444455
Q ss_pred hhhcCCCCcEEEccccccccccCcccccce-eceeecc
Q 042075 422 AIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLS 458 (1033)
Q Consensus 422 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls 458 (1033)
+|.++++|+.+++..| ++..-...|.++. |+.+++.
T Consensus 338 aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 338 SFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred hccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 5666666666655544 4333334444443 4444444
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.38 E-value=6.7e-12 Score=143.39 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=82.3
Q ss_pred cCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEccccccccccCcccccce-eceeeccccccCCCCCCccCC
Q 042075 394 NIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQENRFLGNIPPSIGNLK-LFNLQLSYNFLQGSIPSSLGQ 472 (1033)
Q Consensus 394 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~ 472 (1033)
+...+|.++..|+.+.+..+... .....|..+..++.+....+.+. ...|..+. |+.+.+..+ ++..-..+|.+
T Consensus 244 i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~ 318 (394)
T 4fs7_A 244 LGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFES 318 (394)
T ss_dssp ECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTT
T ss_pred cccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcC
Confidence 34455666666666666655443 45556666666666665544321 12233333 444444433 33344455556
Q ss_pred CCcccEEecCCCccCCCCCccccCchhHHhhhhccCccccCCcCCccccccccceEEccccccccccCccccccccccee
Q 042075 473 SETLTIIDLSNNNLTGTIPPQLLGLSSLLIVLELSRNQLTGPIPNEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELL 552 (1033)
Q Consensus 473 l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 552 (1033)
+++|+.+++.++ + +..-..+|.++++|+.+++..| ++..-..+|.+|.+|+.+
T Consensus 319 c~~L~~i~lp~~-v-------------------------~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 319 CTSLVSIDLPYL-V-------------------------EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKV 371 (394)
T ss_dssp CTTCCEECCCTT-C-------------------------CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEE
T ss_pred CCCCCEEEeCCc-c-------------------------cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEE
Confidence 666666655322 2 2223456667777777777665 554445677777777777
Q ss_pred ecccccccCcccccccCcccCCcc
Q 042075 553 QMQGNFLQGPIPSSLSSLRGLSVL 576 (1033)
Q Consensus 553 ~Ls~N~l~~~~p~~~~~l~~L~~L 576 (1033)
++..+ ++ .+..+|.++++|+.+
T Consensus 372 ~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 372 ELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EECCC-CE-EhhheecCCCCCcEE
Confidence 77654 33 344567777666543
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=3e-12 Score=143.74 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=57.4
Q ss_pred cceeeeEecCCCCCeEEEEEcCCCCCCcccccccCCCCCCCEEEecC-CCccccCCccccccccccEEecccCCCCCCCC
Q 042075 71 CQWHGVTCSRRQHQRVTILDLKSLKLAGYISAHVGNLSFLKVLDLHN-NSFHHEIPSEFDRLRRLQVLALHNNSIGGEIP 149 (1033)
Q Consensus 71 c~w~gv~C~~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 149 (1033)
|.|.+|.|+.. ++|++ +|. +..+++|++|+|++ |.|++..|..|+.|++|++|+|++|+|++..|
T Consensus 8 C~~~~v~~~~~------------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCTRD------------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECCSS------------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcCCC------------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 88888877532 13442 455 66666666666664 66665555555556666666666655555555
Q ss_pred ccccCCCCCcEEEcccccccCCCCCCcccccccceeeeccccc
Q 042075 150 ANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEYFSVSYNNL 192 (1033)
Q Consensus 150 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 192 (1033)
..|++|++|++|+|++|+|++..+..|..++ |++|+|++|.+
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCc
Confidence 5555555555555555555533333333332 44444444443
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=5.3e-12 Score=141.71 Aligned_cols=103 Identities=20% Similarity=0.221 Sum_probs=74.7
Q ss_pred EEecccC-CCCCCCCccccCCCCCcEEEccc-ccccCCCCCCcccccccceeeecccccCCCCCCCCCCCCCCcEEEccc
Q 042075 136 VLALHNN-SIGGEIPANISSCSNLIRVRLSS-NELVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSR 213 (1033)
Q Consensus 136 ~L~Ls~n-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 213 (1033)
.++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|.+|++|++|+|++|+|++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 777 5777 77777788888875 777766667777777777777777777777777777777777777777
Q ss_pred CcCCCcCCccccccCCCCcccccccccC
Q 042075 214 NNLDGSIPDTFGWLKNLVNLTMAQNRLS 241 (1033)
Q Consensus 214 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 241 (1033)
|+|++..+..|..++ |++|+|++|++.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777765555565554 777777777665
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=1.2e-11 Score=132.86 Aligned_cols=148 Identities=15% Similarity=0.079 Sum_probs=114.1
Q ss_pred HHHHhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCCceeEeeeecccccc
Q 042075 705 NLYNATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 783 (1033)
Q Consensus 705 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 783 (1033)
.+....++|++....+.|+.+.||++... ++.+++|+...........+.+|+++++.+ .+..+.++++++.
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~----- 80 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER----- 80 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-----
Confidence 34556678999999999999999999864 578999998753222335688999999998 4677888888843
Q ss_pred CCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC--------------------
Q 042075 784 GNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC-------------------- 843 (1033)
Q Consensus 784 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------------------- 843 (1033)
..+..|+||||++|.++.+.... ..+...++.+++++++.||+..
T Consensus 81 ~~~~~~lv~e~i~G~~l~~~~~~---------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~ 145 (263)
T 3tm0_A 81 HDGWSNLLMSEADGVLCSEEYED---------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYL 145 (263)
T ss_dssp ETTEEEEEEECCSSEEHHHHCCT---------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHH
T ss_pred cCCceEEEEEecCCeehhhccCC---------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHH
Confidence 34578999999999999876411 1123478899999999999810
Q ss_pred ------------------------------------CCCcEeccCCCCCeEecCCCcEEEeecccce
Q 042075 844 ------------------------------------QPPIVHCDLKPSNVLLDEEMIAHVGDFGLAT 874 (1033)
Q Consensus 844 ------------------------------------~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~ 874 (1033)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 146 LNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1469999999999999876666799998775
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=3.5e-13 Score=151.88 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=40.1
Q ss_pred ccccccceEEccccccccc----cCcccccccccceeecccccccCc----ccccccCcccCCccccccccccccCCccc
Q 042075 520 GNLKNLEMLNVFENKLRGE----IPRTLGSCIKLELLQMQGNFLQGP----IPSSLSSLRGLSVLDLSQNNLSGKIPEFL 591 (1033)
Q Consensus 520 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 591 (1033)
...++|++|||++|+|+.. ++..+...++|++|+|++|.|+.. ++..+...++|++|||++|.|+..-...+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 3445566666666666532 234445555666666666666532 23334445666666666666664444333
Q ss_pred c
Q 042075 592 V 592 (1033)
Q Consensus 592 ~ 592 (1033)
.
T Consensus 260 ~ 260 (372)
T 3un9_A 260 R 260 (372)
T ss_dssp H
T ss_pred H
Confidence 3
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=2.7e-13 Score=152.74 Aligned_cols=160 Identities=18% Similarity=0.154 Sum_probs=110.6
Q ss_pred CCCCcEEEccccccccccCcccccc------eeceeeccccccCCCCCCcc-CCCCcccEEecCCCccCCCCCccccCch
Q 042075 426 LQNLRELRLQENRFLGNIPPSIGNL------KLFNLQLSYNFLQGSIPSSL-GQSETLTIIDLSNNNLTGTIPPQLLGLS 498 (1033)
Q Consensus 426 l~~L~~L~L~~N~l~~~~p~~~~~l------~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 498 (1033)
+++|+.|+|++|.++......+... .|++|+|++|.++......+ ..+++|+.|+|++|+|+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~----------- 139 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG----------- 139 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-----------
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-----------
Confidence 4678899999999875444433322 26666666666643222222 22445666666666554
Q ss_pred hHHhhhhccCccccCCcCCcc-----ccccccceEEcccccccc----ccCcccccccccceeecccccccCc----ccc
Q 042075 499 SLLIVLELSRNQLTGPIPNEV-----GNLKNLEMLNVFENKLRG----EIPRTLGSCIKLELLQMQGNFLQGP----IPS 565 (1033)
Q Consensus 499 ~ll~~L~ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 565 (1033)
......+ ...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++.
T Consensus 140 --------------~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 140 --------------PEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp --------------HHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 2111111 134679999999999974 2455567889999999999999853 366
Q ss_pred cccCcccCCcccccccccccc----CCcccccccccceeecCCCcCccc
Q 042075 566 SLSSLRGLSVLDLSQNNLSGK----IPEFLVGFQLLEYLNLSNNDFEGM 610 (1033)
Q Consensus 566 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~ 610 (1033)
.+...++|+.|||++|.|+.. ++..+...+.|++|+|++|+|+..
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 778889999999999999863 445556679999999999998753
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.10 E-value=1.2e-09 Score=124.62 Aligned_cols=109 Identities=12% Similarity=0.159 Sum_probs=63.0
Q ss_pred ccccccc-cccEEecccCCCCCCCCccccCCCCCcEEEccccc---ccCCCCCCcccccccceeeecccccCCCCCCCCC
Q 042075 126 SEFDRLR-RLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE---LVGKIPSELGSLSKIEYFSVSYNNLTGSIPPSFG 201 (1033)
Q Consensus 126 ~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 201 (1033)
.+|.++. .|+.+.+..+ ++..-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++......|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3455553 4666666543 553445566777777777776653 43223456666677776666544 3434445666
Q ss_pred CCCCCcEEEcccCcCCCcCCccccccCCCCcccccc
Q 042075 202 NLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQ 237 (1033)
Q Consensus 202 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 237 (1033)
++.+|+.+.+..+. .......|..+.+|+.+.+..
T Consensus 135 ~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~ 169 (394)
T 4gt6_A 135 HCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPD 169 (394)
T ss_dssp TCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCT
T ss_pred hhccccccccccee-eeecccceecccccccccccc
Confidence 77777777775433 324455666666666666544
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.07 E-value=3.1e-09 Score=121.21 Aligned_cols=157 Identities=9% Similarity=0.108 Sum_probs=110.8
Q ss_pred cccCCCC-CCCEEEecCCCccccCCccccccccccEEecccCC---CCCCCCccccCCCCCcEEEcccccccCCCCCCcc
Q 042075 102 AHVGNLS-FLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNS---IGGEIPANISSCSNLIRVRLSSNELVGKIPSELG 177 (1033)
Q Consensus 102 ~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 177 (1033)
.+|.+.. .|+.+.+.++ ++..-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++..-...|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3566663 5899998754 665556789999999999998874 55444667888999998888755 5434456788
Q ss_pred cccccceeeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCCCCcccccCCCceeEE
Q 042075 178 SLSKIEYFSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIPSSIFNISSITVF 257 (1033)
Q Consensus 178 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 257 (1033)
.+.+|+.+.+..+ +..+....|.++.+|+.+.+.++ ++.....+|.. .+|+.+.+..+-.. .-...+.++.+++..
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcccccee
Confidence 9999999999755 44366678889999999999866 44355556654 57888877654332 444566666777666
Q ss_pred eccCccc
Q 042075 258 DAGINQI 264 (1033)
Q Consensus 258 ~ls~N~l 264 (1033)
....+..
T Consensus 211 ~~~~~~~ 217 (394)
T 4gt6_A 211 TSDSESY 217 (394)
T ss_dssp EECCSSS
T ss_pred ccccccc
Confidence 6554443
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.05 E-value=2.6e-10 Score=122.13 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=99.2
Q ss_pred HhhCCCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCC--ceeEeeeeccccccCC
Q 042075 708 NATDGFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRN--LVKILTACSGVDYQGN 785 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~ 785 (1033)
....+|.+....+.|..+.||++... +|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++. ..+
T Consensus 17 ~~~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----~~~ 87 (264)
T 1nd4_A 17 ERLFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVV-----TEA 87 (264)
T ss_dssp TTTTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECS
T ss_pred HhcCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEec-----cCC
Confidence 33445555444446667999999764 5677999997643 2356788999999985444 55677763 334
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC----------------------
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC---------------------- 843 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------- 843 (1033)
+..++||||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 88 ~~~~~v~e~i~G~~l~--~~~-------------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (264)
T 1nd4_A 88 GRDWLLLGEVPGQDLL--SSH-------------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRME 149 (264)
T ss_dssp SCEEEEEECCSSEETT--TSC-------------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCcccC--cCc-------------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHh
Confidence 5689999999998884 211 01 1256777778888888641
Q ss_pred ---------------------------------CCCcEeccCCCCCeEecCCCcEEEeeccccee
Q 042075 844 ---------------------------------QPPIVHCDLKPSNVLLDEEMIAHVGDFGLATF 875 (1033)
Q Consensus 844 ---------------------------------~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~ 875 (1033)
.++++|+|++|.||++++++.+.|+|||.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 150 AGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998763
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.91 E-value=3.5e-12 Score=134.71 Aligned_cols=179 Identities=15% Similarity=0.186 Sum_probs=84.6
Q ss_pred cCCChhhHHHHHHHHHhcccCCCCCCCCCCC--------------CCCCcceeeeEecCCCCCeEEEEEcCC---CCCCc
Q 042075 36 VAGNETDRLALLEFKSKITHDPLGVFGSWNE--------------SIHFCQWHGVTCSRRQHQRVTILDLKS---LKLAG 98 (1033)
Q Consensus 36 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~W~~--------------~~~~c~w~gv~C~~~~~~~v~~l~l~~---~~l~g 98 (1033)
..+..-|++-|+.+-+.....|- ....|.. +...|+|.|+.|+.. ..+|+.+...+ ..+.|
T Consensus 30 ~~g~ky~k~~ll~~i~~~~~~~f-~p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~-~~ki~~~v~~~~~~~~~~~ 107 (267)
T 3rw6_A 30 PYGRKYDKAWLLSMIQSKCSVPF-TPIEFHYENTRAQFFVEDASTASALKAVNYKILDRE-NRRISIIINSSAPPHTILN 107 (267)
T ss_dssp TTGGGSCHHHHHHHHHHTCSSCC-CCEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTT-SCBCCCEEEECCCCHHHHT
T ss_pred cCccccCHHHHHHHHHHhCCCCc-EeEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCC-CCEEEEEEecCCCcccccc
Confidence 33556677777777666532221 1123321 112389999999875 45676655544 22333
Q ss_pred cccc-ccCCCCCCCEEEecCCCccccCC-ccccccccccE--EecccCCCCCCCCc----cccCCCCCcEEEcccccccC
Q 042075 99 YISA-HVGNLSFLKVLDLHNNSFHHEIP-SEFDRLRRLQV--LALHNNSIGGEIPA----NISSCSNLIRVRLSSNELVG 170 (1033)
Q Consensus 99 ~~~~-~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~--L~Ls~n~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~ 170 (1033)
.+.+ .+..++. .|....|.-++.++ +.|...+.|+. ++++.|... .++. ...++++|++|+|++|+|++
T Consensus 108 ~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~ 184 (267)
T 3rw6_A 108 ELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYR 184 (267)
T ss_dssp SCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCC
T ss_pred cCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCC
Confidence 3321 1111111 11111222222111 11333444444 555555432 2222 11345666666666666665
Q ss_pred --CCCCCcccccccceeeecccccCCCCCCCCCCCC--CCcEEEcccCcCCCcCC
Q 042075 171 --KIPSELGSLSKIEYFSVSYNNLTGSIPPSFGNLS--SISFLFLSRNNLDGSIP 221 (1033)
Q Consensus 171 --~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p 221 (1033)
.+|..+..+++|++|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 185 l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 185 LDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3344555566666666666666543 1122222 55666666666554444
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=1.3e-10 Score=129.66 Aligned_cols=156 Identities=13% Similarity=0.184 Sum_probs=86.3
Q ss_pred CCeEEEEEcCCCCCCc-c-------cccccCCCCCCCEEEecCCCcc---------ccCCccccccccccEEecccCCCC
Q 042075 83 HQRVTILDLKSLKLAG-Y-------ISAHVGNLSFLKVLDLHNNSFH---------HEIPSEFDRLRRLQVLALHNNSIG 145 (1033)
Q Consensus 83 ~~~v~~l~l~~~~l~g-~-------~~~~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~ 145 (1033)
..+|+.|.+..+...| . +..++..+++|+.|.+.++... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3467788877666553 2 2344567788999988765431 234455566788888888877311
Q ss_pred CCCCccccCCCCCcEEEcccccccCCCCCCcc--cccccceeeecc--cccCCCC-----CCCC--CCCCCCcEEEcccC
Q 042075 146 GEIPANISSCSNLIRVRLSSNELVGKIPSELG--SLSKIEYFSVSY--NNLTGSI-----PPSF--GNLSSISFLFLSRN 214 (1033)
Q Consensus 146 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~~-----p~~~--~~l~~L~~L~L~~N 214 (1033)
.+|. + .+++|++|+|..|.+....-..+. .+++|++|+|+. |...+.. ...+ ..+++|++|+|++|
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 2333 3 377888888887776533222333 577788887753 2221110 0111 23556666666666
Q ss_pred cCCCcCCcccc---ccCCCCcccccccccC
Q 042075 215 NLDGSIPDTFG---WLKNLVNLTMAQNRLS 241 (1033)
Q Consensus 215 ~l~~~~p~~~~---~l~~L~~L~L~~N~l~ 241 (1033)
.+....+..+. .+++|++|+|+.|.++
T Consensus 263 ~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred CCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 65532222222 2445555555555554
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=9.7e-10 Score=120.59 Aligned_cols=190 Identities=18% Similarity=0.148 Sum_probs=122.4
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhc-CCCC--ceeEeeeeccccccCCCceeEEE
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRN--LVKILTACSGVDYQGNDFKALVF 792 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~~~~~~~~~lv~ 792 (1033)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+ .+.. +.+++..+.. ...-...|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4679999999999864 34889986532 3456788999999888 3332 4445444211 11112458999
Q ss_pred EcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhC------------------------------
Q 042075 793 EFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHD------------------------------ 842 (1033)
Q Consensus 793 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------ 842 (1033)
||++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999988865331 2366777788888888888888861
Q ss_pred -------------------------CCCCcEeccCCCCCeEecC--CCcEEEeecccceecCCCCcccccccc---ccc-
Q 042075 843 -------------------------CQPPIVHCDLKPSNVLLDE--EMIAHVGDFGLATFLPLSHAQTSSIFA---KGS- 891 (1033)
Q Consensus 843 -------------------------~~~~ivHrDlkp~NIll~~--~~~~kL~DfG~a~~~~~~~~~~~~~~~---~gt- 891 (1033)
..+.++|+|++|.||++++ +..+.|+||+.+............... .+.
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 1246899999999999998 456889999998764322111000000 000
Q ss_pred ------ccc--cc-ccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 042075 892 ------IGY--IA-PEYGLGSEVSINGDVYSYGILLLELVTRKKPT 928 (1033)
Q Consensus 892 ------~~y--~a-PE~~~~~~~~~~sDvwSlG~vl~elltg~~p~ 928 (1033)
..| .. |+... ......+.|++|.++|.+.+|..+|
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 011 11 22111 1122358999999999999998875
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=6.2e-09 Score=117.12 Aligned_cols=145 Identities=15% Similarity=0.164 Sum_probs=106.4
Q ss_pred ccceecccCceeEEEEEeCCCCeEEEEEEee--ccC-chhHHHHHHHHHHHHhcC--CCCceeEeeeeccccccCCCcee
Q 042075 715 SANLIGAGSFGSVYKGILDEGKTIVAVKVFN--LLH-HGAFKSFIAECNTLKNIR--HRNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 715 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
..+.++.|.++.||++... +..+++|+.. ... ......+.+|+.+++.+. +..+++++.++.+.. ..+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeE
Confidence 4678999999999999875 4578888765 322 122356788999999996 456788888864321 224578
Q ss_pred EEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC--------------------------
Q 042075 790 LVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC-------------------------- 843 (1033)
Q Consensus 790 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------------------------- 843 (1033)
+||||++|..+.+.. ...++..++..++.+++++|..||+..
T Consensus 118 ~vme~v~G~~l~~~~------------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS------------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQ 185 (359)
T ss_dssp EEEECCCCBCCCCTT------------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc------------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHH
Confidence 999999997775422 123677888899999999999999731
Q ss_pred -----------------------------CCCcEeccCCCCCeEecCCCc--EEEeeccccee
Q 042075 844 -----------------------------QPPIVHCDLKPSNVLLDEEMI--AHVGDFGLATF 875 (1033)
Q Consensus 844 -----------------------------~~~ivHrDlkp~NIll~~~~~--~kL~DfG~a~~ 875 (1033)
.+.++|||++|.||++++++. +.|+||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 186 YKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999875
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.75 E-value=7.9e-10 Score=123.28 Aligned_cols=205 Identities=12% Similarity=0.145 Sum_probs=103.0
Q ss_pred CCCCCEEEecCCCccc-c-------CCccccccccccEEecccCCCC---------CCCCccccCCCCCcEEEccccccc
Q 042075 107 LSFLKVLDLHNNSFHH-E-------IPSEFDRLRRLQVLALHNNSIG---------GEIPANISSCSNLIRVRLSSNELV 169 (1033)
Q Consensus 107 l~~L~~L~L~~n~l~~-~-------~p~~~~~l~~L~~L~Ls~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~ 169 (1033)
++.++.|.+....+.| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3456777777665553 2 1334566788888888765431 122233345566666666655211
Q ss_pred CCCCCCcccccccceeeecccccCCCCCCCCC--CCCCCcEEEccc--CcCCCcCCccccccCCCCcccccccccCCCCc
Q 042075 170 GKIPSELGSLSKIEYFSVSYNNLTGSIPPSFG--NLSSISFLFLSR--NNLDGSIPDTFGWLKNLVNLTMAQNRLSGTIP 245 (1033)
Q Consensus 170 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 245 (1033)
.++. + .+++|++|+|..|.++......+. .+++|++|+|+. |...+.. . +. .+.
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~----------------~~-~l~ 243 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--D----------------MN-VFR 243 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--C----------------GG-GTG
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--h----------------HH-HHH
Confidence 1222 2 245555555555554322111121 345555555532 1111100 0 00 000
Q ss_pred ccc--cCCCceeEEeccCccccCccCcccc--ccccccceeeecccccCCC----CCccCcCCCCccccccccccccCcC
Q 042075 246 SSI--FNISSITVFDAGINQIQGVIPLDIG--FTLQNLQFFSVGRNQLTGA----IPPAISNASNLEVFQVNSNKLTGEV 317 (1033)
Q Consensus 246 ~~l--~~l~~L~~L~ls~N~l~~~~p~~~~--~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (1033)
..+ ..+++|++|+|++|.+....+..++ ..+++|++|+|+.|.|++. ++..+.++++|+.|++++|.++...
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 111 1345666666666666533322222 1366788888888877653 3334456788888888888876432
Q ss_pred cchhhhcc--ccceeeecCc
Q 042075 318 PYLEKLQR--LSHFVITRNS 335 (1033)
Q Consensus 318 ~~l~~l~~--L~~L~l~~N~ 335 (1033)
...+.. ...++++.+.
T Consensus 324 --~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 324 --KKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp --HHHHHHHCCSEEECCSBC
T ss_pred --HHHHHHHcCCEEEecCCc
Confidence 222222 2557777776
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.63 E-value=5.5e-07 Score=101.95 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=42.0
Q ss_pred CccccccccceEEccccccccccCcccccccccceeecccccccCcccccccCcccCCccccccccccccCCcccccc
Q 042075 517 NEVGNLKNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGF 594 (1033)
Q Consensus 517 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 594 (1033)
..|.++.+|+.+++.++.++..-..+|.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.+.
T Consensus 280 ~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 280 LLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 34555666666666666665444456666666666666543 44334456666666666666544 442223444443
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.61 E-value=1.1e-06 Score=99.30 Aligned_cols=196 Identities=11% Similarity=-0.003 Sum_probs=89.9
Q ss_pred CCCCCCCEEEecCCCccccCCccccccccccEEecccCCCCCCCCccccCCCCCcEEEcccccccCCCCCCcccccccce
Q 042075 105 GNLSFLKVLDLHNNSFHHEIPSEFDRLRRLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNELVGKIPSELGSLSKIEY 184 (1033)
Q Consensus 105 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 184 (1033)
..-.+|+.+.+.. .++..-..+|.++++|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-..+|.. .+|+.
T Consensus 43 ~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~ 117 (379)
T 4h09_A 43 KDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDD 117 (379)
T ss_dssp GGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSE
T ss_pred ccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccc
Confidence 3344455555542 344233345566666666666433 442333444444 4555555432 33122223333 35666
Q ss_pred eeecccccCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccccccCC------------CCcccccCCC
Q 042075 185 FSVSYNNLTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRLSG------------TIPSSIFNIS 252 (1033)
Q Consensus 185 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~------------~~p~~l~~l~ 252 (1033)
+.+..+ ++......|.+. +|+.+.+..+ ++......|....+++.+.+..+.... .....+....
T Consensus 118 i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 118 FEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 655543 221223334332 3444444432 232344455555555555444332210 1122233344
Q ss_pred ceeEEeccCccccCccCccccccccccceeeecccccCCCCCccCcCCCCccccccccc
Q 042075 253 SITVFDAGINQIQGVIPLDIGFTLQNLQFFSVGRNQLTGAIPPAISNASNLEVFQVNSN 311 (1033)
Q Consensus 253 ~L~~L~ls~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 311 (1033)
++..+.+..+.- .+....+....+|+.+.+..+ ++......+.++.+|+.+.+..+
T Consensus 195 ~~~~~~~~~~~~--~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~ 250 (379)
T 4h09_A 195 TGTEFTIPSTVK--TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN 250 (379)
T ss_dssp CCSEEECCTTCC--EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT
T ss_pred ccccccccccee--EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC
Confidence 444444433221 233344445667777776544 34345566777777877777554
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=1.4e-08 Score=107.22 Aligned_cols=79 Identities=25% Similarity=0.363 Sum_probs=48.6
Q ss_pred cccccceEEcccccccc--ccCcccccccccceeecccccccCcccccccCcc--cCCccccccccccccCCc-------
Q 042075 521 NLKNLEMLNVFENKLRG--EIPRTLGSCIKLELLQMQGNFLQGPIPSSLSSLR--GLSVLDLSQNNLSGKIPE------- 589 (1033)
Q Consensus 521 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------- 589 (1033)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++.+|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45667777777777775 3445566677777777777777643 3344444 666667777766665552
Q ss_pred ccccccccceee
Q 042075 590 FLVGFQLLEYLN 601 (1033)
Q Consensus 590 ~~~~l~~L~~L~ 601 (1033)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 245566666554
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.47 E-value=7.8e-07 Score=98.01 Aligned_cols=136 Identities=15% Similarity=0.151 Sum_probs=99.4
Q ss_pred CCCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCC----CCceeEeeeeccccccCCCc
Q 042075 712 GFTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRH----RNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 712 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~~ 787 (1033)
.....+.++.|....||++ ++.+++|+.... .....+.+|+++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 5566788999999999998 345888976432 224568899999998865 223444443 25
Q ss_pred eeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCC------------------------
Q 042075 788 KALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDC------------------------ 843 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------ 843 (1033)
.++||||++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 102 ~~lvme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 689999999988864321 13566667777888888888888542
Q ss_pred ------------------------------------CCCcEeccCCCCCeEecCCCcEEEeeccccee
Q 042075 844 ------------------------------------QPPIVHCDLKPSNVLLDEEMIAHVGDFGLATF 875 (1033)
Q Consensus 844 ------------------------------------~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~ 875 (1033)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12459999999999999876679999999865
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=9.2e-09 Score=103.47 Aligned_cols=70 Identities=10% Similarity=0.096 Sum_probs=42.5
Q ss_pred cccccCCCCCCCEEEecCC-Ccccc----CCccccccccccEEecccCCCCCC----CCccccCCCCCcEEEccccccc
Q 042075 100 ISAHVGNLSFLKVLDLHNN-SFHHE----IPSEFDRLRRLQVLALHNNSIGGE----IPANISSCSNLIRVRLSSNELV 169 (1033)
Q Consensus 100 ~~~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 169 (1033)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 4445666777888888887 77542 334455566777777777777532 2223334456666666666665
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36 E-value=1.8e-06 Score=92.54 Aligned_cols=145 Identities=17% Similarity=0.077 Sum_probs=100.9
Q ss_pred HhhCCCCccceecccCce-eEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCC
Q 042075 708 NATDGFTSANLIGAGSFG-SVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGN 785 (1033)
Q Consensus 708 ~~~~~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~ 785 (1033)
....+|+. +.+..|..+ .||+.....++..+++|+... .....+.+|...++.+. +--+.++++++. .+
T Consensus 22 ~~l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-----~~ 92 (272)
T 4gkh_A 22 ADLYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIR-----TP 92 (272)
T ss_dssp HHHTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE-----ET
T ss_pred ccccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEE-----EC
Confidence 33445543 345556655 699988877778899998653 23466888999999883 334677777753 33
Q ss_pred CceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhC-----------------------
Q 042075 786 DFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHD----------------------- 842 (1033)
Q Consensus 786 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------------------- 842 (1033)
+..++|||+++|.++.+.... ...+...++.++++.+..||+.
T Consensus 93 ~~~~lvme~l~G~~~~~~~~~--------------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
T 4gkh_A 93 DDAWLLTTAIPGKTAFQVLEE--------------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMN 158 (272)
T ss_dssp TEEEEEEECCCSEEHHHHHHH--------------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHH
T ss_pred CeEEEEEEeeCCccccccccC--------------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHH
Confidence 578999999999888776521 1122334666667777777742
Q ss_pred --------------------------------CCCCcEeccCCCCCeEecCCCcEEEeeccccee
Q 042075 843 --------------------------------CQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATF 875 (1033)
Q Consensus 843 --------------------------------~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~ 875 (1033)
..+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 159 NGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012489999999999999887778999998763
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=2.2e-06 Score=92.48 Aligned_cols=76 Identities=17% Similarity=0.065 Sum_probs=59.7
Q ss_pred ccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCC---CceeEeeeeccccccCCCceeEE
Q 042075 715 SANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHR---NLVKILTACSGVDYQGNDFKALV 791 (1033)
Q Consensus 715 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv 791 (1033)
..+.|+.|.++.||+++.. +|+.++||+...........+..|++.++.+.+. .+++++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3578999999999999875 6788999996543333346789999999999764 577777752 36899
Q ss_pred EEcccCCch
Q 042075 792 FEFMHNRSL 800 (1033)
Q Consensus 792 ~e~~~~gsL 800 (1033)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.31 E-value=3.1e-06 Score=92.42 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=93.0
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCC---CceeEeeeeccccccCCCceeEEE
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHR---NLVKILTACSGVDYQGNDFKALVF 792 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv~ 792 (1033)
.+.++.|....||+. +..+++|+.+ .......+.+|+++++.+.+. .+.+++.++. ...+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence 457888999999998 3457888853 223456789999999999642 3556666542 2345678999
Q ss_pred EcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhC------------------------------
Q 042075 793 EFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHD------------------------------ 842 (1033)
Q Consensus 793 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------ 842 (1033)
||++|.++.+... ..++..+...++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~------------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGM------------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhh------------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 9999988876321 1123344444555555555555532
Q ss_pred ---------------------------CCCCcEeccCCCCCeEecC---CCc-EEEeeccccee
Q 042075 843 ---------------------------CQPPIVHCDLKPSNVLLDE---EMI-AHVGDFGLATF 875 (1033)
Q Consensus 843 ---------------------------~~~~ivHrDlkp~NIll~~---~~~-~kL~DfG~a~~ 875 (1033)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2336799999999999987 455 58999998864
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.21 E-value=5e-08 Score=98.03 Aligned_cols=94 Identities=13% Similarity=0.136 Sum_probs=55.3
Q ss_pred CCccccccccccEEecccC-CCCCC----CCccccCCCCCcEEEcccccccCC----CCCCcccccccceeeecccccCC
Q 042075 124 IPSEFDRLRRLQVLALHNN-SIGGE----IPANISSCSNLIRVRLSSNELVGK----IPSELGSLSKIEYFSVSYNNLTG 194 (1033)
Q Consensus 124 ~p~~~~~l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 194 (1033)
+...+...+.|++|+|++| .|+.. +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666788888888888 77632 334455667788888888877532 22333444566666666666653
Q ss_pred C----CCCCCCCCCCCcEEEc--ccCcCC
Q 042075 195 S----IPPSFGNLSSISFLFL--SRNNLD 217 (1033)
Q Consensus 195 ~----~p~~~~~l~~L~~L~L--~~N~l~ 217 (1033)
. +...+...++|++|+| ++|.|.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2233444445555555 455554
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.11 E-value=1.5e-05 Score=89.06 Aligned_cols=152 Identities=13% Similarity=0.127 Sum_probs=91.1
Q ss_pred CccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCC--ceeEeeeeccccccCCCceeEE
Q 042075 714 TSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRN--LVKILTACSGVDYQGNDFKALV 791 (1033)
Q Consensus 714 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv 791 (1033)
...+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.+++.++.. ..+..++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~lv 112 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTYCI 112 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeEEE
Confidence 3457789999999999886 4788999987432 35788999999885433 4566665422 22568999
Q ss_pred EEcccCCchhhh------------------cccCCCCc-cc---c---cc---------------ccccCHHHH------
Q 042075 792 FEFMHNRSLEEW------------------LHPITRED-ET---E---EA---------------PRSLNLLQR------ 825 (1033)
Q Consensus 792 ~e~~~~gsL~~~------------------l~~~~~~~-~~---~---~~---------------~~~l~~~~~------ 825 (1033)
|||++|.++.+. ++...... .. . .. .....|...
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998776532 01110000 00 0 00 000011110
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCcEeccCCCCCeEecCCCcEEEeecccceec
Q 042075 826 LDIGIDVACALSYLHHDC-QPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFL 876 (1033)
Q Consensus 826 ~~i~~qi~~~L~~LH~~~-~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~ 876 (1033)
......+....+++.... .+.++|+|++|.||++++++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 011112222233332211 257899999999999988777889999998753
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.04 E-value=1.1e-05 Score=90.16 Aligned_cols=85 Identities=4% Similarity=-0.069 Sum_probs=56.6
Q ss_pred ccee-cccCceeEEEEEeC---C---CCeEEEEEEeeccC---chhHHHHHHHHHHHHhcC-C--CCceeEeeeeccccc
Q 042075 716 ANLI-GAGSFGSVYKGILD---E---GKTIVAVKVFNLLH---HGAFKSFIAECNTLKNIR-H--RNLVKILTACSGVDY 782 (1033)
Q Consensus 716 ~~~l-g~G~~g~Vy~~~~~---~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~ 782 (1033)
.+.| +.|....+|+.... + +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+..
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~- 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD- 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST-
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC-
Confidence 3567 88999999998753 1 15678899865422 101245778999998883 3 35777887753221
Q ss_pred cCCCceeEEEEcccCCchhh
Q 042075 783 QGNDFKALVFEFMHNRSLEE 802 (1033)
Q Consensus 783 ~~~~~~~lv~e~~~~gsL~~ 802 (1033)
..+..++||||++|.++.+
T Consensus 104 -~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 -VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp -TTSSCEEEEECCCCBCCCB
T ss_pred -ccCCceEEEEecCCCChhh
Confidence 1135689999999877654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.91 E-value=2.7e-05 Score=88.47 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=49.8
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCc-------hhHHHHHHHHHHHHhcCC--C-CceeEeeeeccccccCC
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHH-------GAFKSFIAECNTLKNIRH--R-NLVKILTACSGVDYQGN 785 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~~ 785 (1033)
.+.+|.|..+.||++....+++.|+||....... ...+++..|.++++.+.. + .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 5689999999999998765677899998653211 123567789999988742 3 344555441 2
Q ss_pred CceeEEEEcccCC
Q 042075 786 DFKALVFEFMHNR 798 (1033)
Q Consensus 786 ~~~~lv~e~~~~g 798 (1033)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2457999999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.80 E-value=8.8e-05 Score=82.27 Aligned_cols=152 Identities=18% Similarity=0.140 Sum_probs=81.6
Q ss_pred ceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCC--CCceeEeeeecccc-ccCCCceeEEEE
Q 042075 717 NLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRH--RNLVKILTACSGVD-YQGNDFKALVFE 793 (1033)
Q Consensus 717 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~-~~~~~~~~lv~e 793 (1033)
+.|+.|..+.||++... ++ .+++|+.... ..++..|+.+++.+.. -.+.+++....+.. ....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~-~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD-SG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET-TE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC-CC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 45666778999999875 33 4889988642 2344456666666631 13444443211100 112446789999
Q ss_pred cccCCchh--------------hhcccCCCCcc-ccc---cccccCHHH-------------------------------
Q 042075 794 FMHNRSLE--------------EWLHPITREDE-TEE---APRSLNLLQ------------------------------- 824 (1033)
Q Consensus 794 ~~~~gsL~--------------~~l~~~~~~~~-~~~---~~~~l~~~~------------------------------- 824 (1033)
|++|.++. ..++....... ... ....-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986543 01111110000 000 000112211
Q ss_pred HHHHHHHHHHHHHHHHh----------CCCCCcEeccCCCCCeEecCCCcEEEeecccce
Q 042075 825 RLDIGIDVACALSYLHH----------DCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLAT 874 (1033)
Q Consensus 825 ~~~i~~qi~~~L~~LH~----------~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~ 874 (1033)
...+..++.+++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11112234456677763 124589999999999999888889999999775
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00018 Score=77.56 Aligned_cols=77 Identities=17% Similarity=0.074 Sum_probs=56.1
Q ss_pred CCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-C--CCceeEeeeeccccccCCCcee
Q 042075 713 FTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-H--RNLVKILTACSGVDYQGNDFKA 789 (1033)
Q Consensus 713 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~~~~~~ 789 (1033)
...++.+|.|..+.||+.+.. +|+.|++|+...........+..|+..|+.+. . -.+++++++. ..+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~~ 86 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRT 86 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTE
T ss_pred eEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cce
Confidence 344678999999999999986 67889999876444444456889999999883 2 2355555541 347
Q ss_pred EEEEcccCCc
Q 042075 790 LVFEFMHNRS 799 (1033)
Q Consensus 790 lv~e~~~~gs 799 (1033)
+||||++++.
T Consensus 87 lv~e~l~~~~ 96 (288)
T 3f7w_A 87 LAMEWVDERP 96 (288)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeecccC
Confidence 9999998764
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.59 E-value=0.00027 Score=76.71 Aligned_cols=145 Identities=16% Similarity=0.130 Sum_probs=90.3
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC---CCCceeEeeeeccccccCCCceeEEE
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR---HRNLVKILTACSGVDYQGNDFKALVF 792 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv~ 792 (1033)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.|+.+. ...+++++.++. ..+..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEEE
Confidence 46799999999999986 3567889987642 3467889999998883 356788887743 235789999
Q ss_pred EcccCCchhh-----------hcccCCC-Ccccc-----------ccccccCHHHHH---HHHH----------------
Q 042075 793 EFMHNRSLEE-----------WLHPITR-EDETE-----------EAPRSLNLLQRL---DIGI---------------- 830 (1033)
Q Consensus 793 e~~~~gsL~~-----------~l~~~~~-~~~~~-----------~~~~~l~~~~~~---~i~~---------------- 830 (1033)
||+++..+.. .++.... ..... .....-+|.+.. ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876521 1222211 00000 001112444322 1111
Q ss_pred HHHHH-HHHHHh-CCCCCcEeccCCCCCeEecCCCcEEEeecc
Q 042075 831 DVACA-LSYLHH-DCQPPIVHCDLKPSNVLLDEEMIAHVGDFG 871 (1033)
Q Consensus 831 qi~~~-L~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kL~DfG 871 (1033)
++++. .+.|.. ...|.++|+|+.+.|++++.++ +.|+|++
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223321 2357899999999999999887 8899974
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.42 E-value=0.00069 Score=74.22 Aligned_cols=172 Identities=15% Similarity=0.103 Sum_probs=92.6
Q ss_pred CCCCHHHHHHhhCCCCc-----cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCC--ce
Q 042075 699 PNISYQNLYNATDGFTS-----ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRN--LV 771 (1033)
Q Consensus 699 ~~~~~~~l~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 771 (1033)
+.++.+++......|.+ .+.|+.|....+|+.... ++ .+++|+.... ...+.+..|+.+++.+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCC
Confidence 45666777777777765 245677888999999875 33 5789988652 12245667888888773222 34
Q ss_pred eEeeeecccc-ccCCCceeEEEEcccCCchhh--------------hcccCCCCccccc--cccccCHHHHHH-------
Q 042075 772 KILTACSGVD-YQGNDFKALVFEFMHNRSLEE--------------WLHPITREDETEE--APRSLNLLQRLD------- 827 (1033)
Q Consensus 772 ~l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~~~~~~--~~~~l~~~~~~~------- 827 (1033)
+++....+.. ....+..+++|+|++|..+.. .++.......... ......|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 4443211100 011245689999999865421 0111100000000 000011221100
Q ss_pred -----HHHHHHHHHHHHHhC----CCCCcEeccCCCCCeEecCCCcEEEeecccce
Q 042075 828 -----IGIDVACALSYLHHD----CQPPIVHCDLKPSNVLLDEEMIAHVGDFGLAT 874 (1033)
Q Consensus 828 -----i~~qi~~~L~~LH~~----~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~ 874 (1033)
+...+.+.++++++. ..++++|+|+.+.||++++++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455555532 13479999999999999887666899998776
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.40 E-value=4.7e-05 Score=74.26 Aligned_cols=84 Identities=14% Similarity=0.139 Sum_probs=53.3
Q ss_pred cccceEEccccccccccCcccccccccceeeccccc-ccCcccccccCc----ccCCcccccccc-ccccCCcccccccc
Q 042075 523 KNLEMLNVFENKLRGEIPRTLGSCIKLELLQMQGNF-LQGPIPSSLSSL----RGLSVLDLSQNN-LSGKIPEFLVGFQL 596 (1033)
Q Consensus 523 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 596 (1033)
.+|+.||++++.++..--..+.++++|+.|+|+++. ++..--..++.+ ++|+.|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777665444556677777777777764 654433444543 367777777764 66544445666777
Q ss_pred cceeecCCCc
Q 042075 597 LEYLNLSNND 606 (1033)
Q Consensus 597 L~~L~ls~N~ 606 (1033)
|++|+|++.+
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777664
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.39 E-value=1.9e-05 Score=77.09 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=38.3
Q ss_pred cccEEecccCCCCCCCCccccCCCCCcEEEccccc-ccCCCCCCcccc----cccceeeecccc-cCCCCCCCCCCCCCC
Q 042075 133 RLQVLALHNNSIGGEIPANISSCSNLIRVRLSSNE-LVGKIPSELGSL----SKIEYFSVSYNN-LTGSIPPSFGNLSSI 206 (1033)
Q Consensus 133 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 206 (1033)
+|++|||+++.|+..--..+.++++|++|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555565555554333445556666666666653 432111122222 245555555542 442211223444555
Q ss_pred cEEEcccC
Q 042075 207 SFLFLSRN 214 (1033)
Q Consensus 207 ~~L~L~~N 214 (1033)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.30 E-value=0.00066 Score=77.48 Aligned_cols=80 Identities=11% Similarity=0.167 Sum_probs=50.2
Q ss_pred CCCcEeccCCCCCeEecCCCcEEEeecccceecCCCCccccccccccccccccccccCCC---CCCcccchHHHHHHHHH
Q 042075 844 QPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIAPEYGLGS---EVSINGDVYSYGILLLE 920 (1033)
Q Consensus 844 ~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlG~vl~e 920 (1033)
.+.++|||++|.||++++++ ++++||+.+..-....... .....-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG-AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH-HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH-HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998776 9999999987532111100 0000012346677654321 11233566688888888
Q ss_pred HHhCC
Q 042075 921 LVTRK 925 (1033)
Q Consensus 921 lltg~ 925 (1033)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.22 E-value=0.0013 Score=71.38 Aligned_cols=75 Identities=8% Similarity=0.068 Sum_probs=46.4
Q ss_pred CCccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCCCceeEE
Q 042075 713 FTSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKALV 791 (1033)
Q Consensus 713 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv 791 (1033)
+.-.+.|+.|....+|++ +.+++|+....... .....+|+.+++.+. +.-..++++++ .+.-++|
T Consensus 20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v 85 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMV 85 (301)
T ss_dssp CCSCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEE
T ss_pred ccceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEE
Confidence 333788999999999999 34889987643221 122356888888773 22224565542 1234689
Q ss_pred EEcc-cCCchh
Q 042075 792 FEFM-HNRSLE 801 (1033)
Q Consensus 792 ~e~~-~~gsL~ 801 (1033)
+||+ +|.++.
T Consensus 86 ~e~i~~g~~l~ 96 (301)
T 3dxq_A 86 TRYIAGAQTMS 96 (301)
T ss_dssp EECCTTCEECC
T ss_pred EeecCCCccCC
Confidence 9999 665553
No 433
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.05 E-value=0.0028 Score=72.58 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=49.5
Q ss_pred cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCc-eeEeeeeccccccCCCceeEEEEc
Q 042075 716 ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNL-VKILTACSGVDYQGNDFKALVFEF 794 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 794 (1033)
.+.|+.|-...+|++...+++..|++|+......... ...+|..+++.+...++ .++++++ . + ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~-----~-~---G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFF-----T-N---GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEE-----T-T---EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEe-----C-C---eEEEEe
Confidence 4678889999999999864457899998754322211 22579999998854443 5666653 1 1 259999
Q ss_pred ccCCchh
Q 042075 795 MHNRSLE 801 (1033)
Q Consensus 795 ~~~gsL~ 801 (1033)
++|.++.
T Consensus 183 I~G~~l~ 189 (458)
T 2qg7_A 183 MDGYALS 189 (458)
T ss_dssp CCSEECC
T ss_pred eCCccCC
Confidence 9886553
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.02 E-value=0.0012 Score=73.68 Aligned_cols=148 Identities=11% Similarity=0.139 Sum_probs=83.9
Q ss_pred cceecccCceeEEEEEeCC-------CCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCCCc
Q 042075 716 ANLIGAGSFGSVYKGILDE-------GKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.+.+..|....+|++.... +++.|++|+..... .......+|.++++.+. +.-..++++++. +
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-----~--- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFP-----E--- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-----T---
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcC-----C---
Confidence 4578888899999998742 34789999864322 23455678999998883 333466666632 1
Q ss_pred eeEEEEcccCCchhhh-cc-------------cCCCCcccccccccc--CHHHHHHHHHHHHH-----------------
Q 042075 788 KALVFEFMHNRSLEEW-LH-------------PITREDETEEAPRSL--NLLQRLDIGIDVAC----------------- 834 (1033)
Q Consensus 788 ~~lv~e~~~~gsL~~~-l~-------------~~~~~~~~~~~~~~l--~~~~~~~i~~qi~~----------------- 834 (1033)
.+||||++|.++..- +. +.-..+. ...+.. -+.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~--~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 202 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEM--PFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL 202 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCC--SSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCC--CCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence 289999998665421 00 0000000 011111 23444444443321
Q ss_pred --HHHHHH----hC-CCCCcEeccCCCCCeEecCC----CcEEEeeccccee
Q 042075 835 --ALSYLH----HD-CQPPIVHCDLKPSNVLLDEE----MIAHVGDFGLATF 875 (1033)
Q Consensus 835 --~L~~LH----~~-~~~~ivHrDlkp~NIll~~~----~~~kL~DfG~a~~ 875 (1033)
.++.|. .. ....++|+|+.+.||+++++ +.+.++||..|..
T Consensus 203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 223332 21 23479999999999999876 7899999988763
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.98 E-value=0.0053 Score=67.29 Aligned_cols=171 Identities=15% Similarity=0.126 Sum_probs=92.6
Q ss_pred CCCCCHHHHHHhhCCCCc-----cceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCC--Cc
Q 042075 698 FPNISYQNLYNATDGFTS-----ANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHR--NL 770 (1033)
Q Consensus 698 ~~~~~~~~l~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--ni 770 (1033)
+...+.+++....+.|.+ ...++ |....||++... +|+.+++|+.+... .....+..|..+++.+... .+
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 445666666665555533 24566 888899998764 45678999986332 1235667788888887422 24
Q ss_pred eeEeeeecccc-ccCCCceeEEEEcccCCchhh-----------h---cccCCCCccccccccccCHHH-----------
Q 042075 771 VKILTACSGVD-YQGNDFKALVFEFMHNRSLEE-----------W---LHPITREDETEEAPRSLNLLQ----------- 824 (1033)
Q Consensus 771 v~l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~~~~~~~~~~~~~l~~~~----------- 824 (1033)
++++.. .+.. ...++..++||||++|..+.. . ++....... .......++..
T Consensus 85 p~~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQL-FIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSC-CSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCC-CccCCCCCHHHHHhhHHHHHhh
Confidence 444443 1110 112346688999998855421 0 111000000 00001111111
Q ss_pred -----------HHHHHHHHHHHHHHHHh-CCCCCcEeccCCCCCeEecCCCcEEEeeccccee
Q 042075 825 -----------RLDIGIDVACALSYLHH-DCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATF 875 (1033)
Q Consensus 825 -----------~~~i~~qi~~~L~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~ 875 (1033)
....+.+++..++.... ...+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11122222222222211 1234789999999999998 4 899999988764
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.95 E-value=0.0019 Score=73.69 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=50.2
Q ss_pred cceecccCceeEEEEEeCC-------CCeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCCCc
Q 042075 716 ANLIGAGSFGSVYKGILDE-------GKTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 787 (1033)
.+.|+.|....||++.... +++.|++|+.... ...+.+.+|..+++.+. +.-..++++.+ . +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~-~-- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----S-G-- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----T-T--
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----C-C--
Confidence 4678889999999998753 2568999998432 11145567999998884 33335666653 1 1
Q ss_pred eeEEEEcccCCch
Q 042075 788 KALVFEFMHNRSL 800 (1033)
Q Consensus 788 ~~lv~e~~~~gsL 800 (1033)
.+|+||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999987554
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.95 E-value=0.00058 Score=63.50 Aligned_cols=58 Identities=22% Similarity=0.288 Sum_probs=32.8
Q ss_pred eeeccccccc-CcccccccCcccCCccccccccccccCCcccccccccceeecCCCcCccc
Q 042075 551 LLQMQGNFLQ-GPIPSSLSSLRGLSVLDLSQNNLSGKIPEFLVGFQLLEYLNLSNNDFEGM 610 (1033)
Q Consensus 551 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 610 (1033)
.++.+++.|+ ..+|..+. ++|+.|||++|+|+...+..|..+++|++|+|++|++...
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 4455555554 23443322 2466666666666655455566666666777777766553
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.92 E-value=0.0023 Score=70.48 Aligned_cols=32 Identities=31% Similarity=0.277 Sum_probs=27.9
Q ss_pred CCCcEeccCCCCCeEecCC----CcEEEeeccccee
Q 042075 844 QPPIVHCDLKPSNVLLDEE----MIAHVGDFGLATF 875 (1033)
Q Consensus 844 ~~~ivHrDlkp~NIll~~~----~~~kL~DfG~a~~ 875 (1033)
.+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3489999999999999874 6899999998874
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.63 E-value=0.008 Score=66.18 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=27.8
Q ss_pred CCcEeccCCCCCeEecCCCcEEEeeccccee
Q 042075 845 PPIVHCDLKPSNVLLDEEMIAHVGDFGLATF 875 (1033)
Q Consensus 845 ~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~ 875 (1033)
+.++|+|+.+.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.55 E-value=0.0059 Score=68.17 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=45.4
Q ss_pred cceecccCceeEEEEEeCCC--------CeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCC-ceeEeeeeccccccCCC
Q 042075 716 ANLIGAGSFGSVYKGILDEG--------KTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRN-LVKILTACSGVDYQGND 786 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~ 786 (1033)
.+.++.|....+|++....+ ++.+++|+....... ......|.++++.+...+ +.++++..
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--------- 107 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--------- 107 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---------
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---------
Confidence 45678888899999987531 267889987543221 122467888888884323 44666542
Q ss_pred ceeEEEEcccCCch
Q 042075 787 FKALVFEFMHNRSL 800 (1033)
Q Consensus 787 ~~~lv~e~~~~gsL 800 (1033)
.-++||||++|.++
T Consensus 108 ~~~~v~e~i~G~~l 121 (369)
T 3c5i_A 108 NGGRIEEWLYGDPL 121 (369)
T ss_dssp TTEEEEECCCSEEC
T ss_pred CCcEEEEEecCCcC
Confidence 12689999988654
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.48 E-value=0.0033 Score=58.30 Aligned_cols=35 Identities=26% Similarity=0.262 Sum_probs=15.6
Q ss_pred CcEEEcccCcCCCcCCccccccCCCCccccccccc
Q 042075 206 ISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQNRL 240 (1033)
Q Consensus 206 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 240 (1033)
|++|+|++|+|+...++.|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433334444444444444444444
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.45 E-value=0.0074 Score=60.11 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=67.8
Q ss_pred CchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeecccceecC
Q 042075 798 RSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLP 877 (1033)
Q Consensus 798 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~ 877 (1033)
-+|.+.|+ ..+.++++.+++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~---------~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--- 97 (229)
T 2yle_A 33 LSLEEILR---------LYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD--- 97 (229)
T ss_dssp EEHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------
T ss_pred ccHHHHHH---------HcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---
Confidence 47899985 3678899999999999999998877221011 1233456889999999888764 1111
Q ss_pred CCCccccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 042075 878 LSHAQTSSIFAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKP 927 (1033)
Q Consensus 878 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~vl~elltg~~p 927 (1033)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -----------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -----------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0233466888753 3456788899999999999975544
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.39 E-value=0.00064 Score=67.56 Aligned_cols=109 Identities=13% Similarity=0.155 Sum_probs=65.4
Q ss_pred CcccEEEccCC-CCCc----cCCccccCCCCCCEEEcccCccccc----CChhhhcCCCCcEEEccccccccccCc----
Q 042075 379 TTLEVLLLDSN-KIFG----NIPAAFGKFVKLLRLEMWNNRLSGT----IPPAIGELQNLRELRLQENRFLGNIPP---- 445 (1033)
Q Consensus 379 ~~L~~L~L~~N-~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~---- 445 (1033)
+.|+.|+|++| +|.. .+.+++..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|....-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46777777764 6652 2345566667788888888888632 334455667788888888887643322
Q ss_pred ccccc-eeceeecccccc---CC----CCCCccCCCCcccEEecCCCccC
Q 042075 446 SIGNL-KLFNLQLSYNFL---QG----SIPSSLGQSETLTIIDLSNNNLT 487 (1033)
Q Consensus 446 ~~~~l-~L~~L~Ls~N~l---~~----~~p~~~~~l~~L~~L~Ls~N~l~ 487 (1033)
.+..- +|++|+|++|.. .. .+...+..-++|+.|+++.|.+.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 22222 277777765432 21 12234445567888888777653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.15 E-value=0.02 Score=63.90 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=84.1
Q ss_pred cceecccCceeEEEEEeCC-------CCeEEEEEEeeccCch---------h---------HHHHHHHHHHHHhc-CCCC
Q 042075 716 ANLIGAGSFGSVYKGILDE-------GKTIVAVKVFNLLHHG---------A---------FKSFIAECNTLKNI-RHRN 769 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~---------~---------~~~~~~E~~~l~~l-~h~n 769 (1033)
.+.|..|-...+|++...+ ..+.|++++.-..... . .+....|..+++.+ .+.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4577788999999998753 1467899987532211 0 11233588888888 3444
Q ss_pred ceeEeeeeccccccCCCceeEEEEcccCCchhhhc-c-------------cCCCCccccccccccC--HHHHHHHHHHHH
Q 042075 770 LVKILTACSGVDYQGNDFKALVFEFMHNRSLEEWL-H-------------PITREDETEEAPRSLN--LLQRLDIGIDVA 833 (1033)
Q Consensus 770 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l-~-------------~~~~~~~~~~~~~~l~--~~~~~~i~~qi~ 833 (1033)
..++++++ .. .+|+||++|.+|..-- . +.-.... ....... +..+.++..++.
T Consensus 137 ~Pkl~~~~-----~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~--~~~~~~~~l~~~i~~~~~~l~ 205 (401)
T 3f2s_A 137 GPKLYGIF-----PQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKM--PFNKEPKWLFGTMEKYLKEVL 205 (401)
T ss_dssp SCCEEEEE-----TT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCC--SSCCSCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEe-----CC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCC--CCCCCcchHHHHHHHHHHHHH
Confidence 66777663 21 2899999976553210 0 0000000 0111122 223333333221
Q ss_pred ----------------------HHH----HHHHhC-CCCCcEeccCCCCCeEecCC------CcEEEeecccce
Q 042075 834 ----------------------CAL----SYLHHD-CQPPIVHCDLKPSNVLLDEE------MIAHVGDFGLAT 874 (1033)
Q Consensus 834 ----------------------~~L----~~LH~~-~~~~ivHrDlkp~NIll~~~------~~~kL~DfG~a~ 874 (1033)
.-+ ++|... ....++|+|+.+.||+++++ +.+.++||..|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 206 RIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HCCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 23468999999999999876 789999998876
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.12 E-value=0.00031 Score=69.87 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=37.8
Q ss_pred ccCCCCCCCEEEecCC-Cccc----cCCccccccccccEEecccCCCCCCC----CccccCCCCCcEEEccccccc
Q 042075 103 HVGNLSFLKVLDLHNN-SFHH----EIPSEFDRLRRLQVLALHNNSIGGEI----PANISSCSNLIRVRLSSNELV 169 (1033)
Q Consensus 103 ~~~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~~----p~~~~~l~~L~~L~Ls~N~l~ 169 (1033)
.+.+-+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|+|...- -..+..-+.|++|+|++|.|.
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3445567777777774 6643 13344555566777777777775321 122223455666666666665
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.53 E-value=0.036 Score=62.49 Aligned_cols=75 Identities=9% Similarity=0.090 Sum_probs=49.8
Q ss_pred cceecccCceeEEEEEeCCC-------CeEEEEEEeeccCchhHHHHHHHHHHHHhcC-CCCceeEeeeeccccccCCCc
Q 042075 716 ANLIGAGSFGSVYKGILDEG-------KTIVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 787 (1033)
Q Consensus 716 ~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 787 (1033)
++.+..|-...+|+...... ++.|++|+........ -+..+|..+++.+. +.-..++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~---------~ 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF---------P 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc---------C
Confidence 45788888999999987521 5779999875432222 23367888888883 33345555542 1
Q ss_pred eeEEEEcccCCch
Q 042075 788 KALVFEFMHNRSL 800 (1033)
Q Consensus 788 ~~lv~e~~~~gsL 800 (1033)
-+.||||++|.++
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.62 E-value=0.32 Score=54.58 Aligned_cols=30 Identities=27% Similarity=0.429 Sum_probs=25.2
Q ss_pred CcEeccCCCCCeEe------cCCCcEEEeeccccee
Q 042075 846 PIVHCDLKPSNVLL------DEEMIAHVGDFGLATF 875 (1033)
Q Consensus 846 ~ivHrDlkp~NIll------~~~~~~kL~DfG~a~~ 875 (1033)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4566899999998863
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.84 E-value=0.12 Score=36.57 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhheeeeccccC
Q 042075 657 LKLALAIISGLIGLSLALSFLIICLVRKRKEN 688 (1033)
Q Consensus 657 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1033)
..++.++++|++++++++..++++++||++++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34677778777777776666566665555443
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.31 E-value=0.11 Score=36.87 Aligned_cols=31 Identities=13% Similarity=0.126 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhheeeecccc
Q 042075 657 LKLALAIISGLIGLSLALSFLIICLVRKRKE 687 (1033)
Q Consensus 657 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1033)
..++.++++|+++++++++.++++++||+++
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 3467778887777777666666666655543
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.67 E-value=1 Score=31.86 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHhhheeeecc
Q 042075 662 AIISGLIGLSLALSFLIICLVRKR 685 (1033)
Q Consensus 662 ~i~~~~~~~~~~~~~~~~~~~~~~ 685 (1033)
+.++|++.++++.+.++++++||+
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhheehhh
Confidence 333444433333333344444444
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.49 E-value=2.7 Score=41.86 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=64.5
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCCCCCcEeccCCCCCeEecCCCcEEEeecccceecCCCCcccccccccccccccc
Q 042075 817 PRSLNLLQRLDIGIDVACALSYLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIA 896 (1033)
Q Consensus 817 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~a 896 (1033)
-...+..++++++..|+...++++.. +|--+.|+||+++.++.+++.-.|+-..+ +
T Consensus 75 ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l-------------------~ 130 (215)
T 4ann_A 75 IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVV-------------------D 130 (215)
T ss_dssp GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTB-------------------S
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCC-------------------C
Confidence 34578899999999999988777654 78899999999999999999877654322 2
Q ss_pred ccccCCCCCCcccchHHHHHHHHHHHhCCCCCCccccC
Q 042075 897 PEYGLGSEVSINGDVYSYGILLLELVTRKKPTDIMFEG 934 (1033)
Q Consensus 897 PE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~~~~~~ 934 (1033)
|. ..+...=.-.+=|++..+++++..|+.-..+
T Consensus 131 P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 131 PL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 21 1112222345667889999999988654443
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.81 E-value=0.38 Score=54.91 Aligned_cols=61 Identities=10% Similarity=0.012 Sum_probs=17.8
Q ss_pred CccceecccCceeEEEEEeCCCCeEEEE------EEeecc--CchhHHHHHHHHHHHHhcCCCCceeEeeee
Q 042075 714 TSANLIGAGSFGSVYKGILDEGKTIVAV------KVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTAC 777 (1033)
Q Consensus 714 ~~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 777 (1033)
.+.+.+| ||.||+|.+.....+||| |..+.. .......+.+|..+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456676 999999999755567888 665432 222335678899999999999999998874
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.07 E-value=7.3 Score=38.84 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=59.6
Q ss_pred cccCHHHHHHHHHHHHHHHH-HHHhCCCCCcEeccCCCCCeEecCCCcEEEeecccceecCCCCcccccccccccccccc
Q 042075 818 RSLNLLQRLDIGIDVACALS-YLHHDCQPPIVHCDLKPSNVLLDEEMIAHVGDFGLATFLPLSHAQTSSIFAKGSIGYIA 896 (1033)
Q Consensus 818 ~~l~~~~~~~i~~qi~~~L~-~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~a 896 (1033)
...+..++++++..|+...+ +++. -+|--+.|+||+++.++.+++.-.|+-.. ++
T Consensus 80 ~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~-------------------lp 135 (219)
T 4ano_A 80 RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKES-------------------LP 135 (219)
T ss_dssp HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTT-------------------BS
T ss_pred HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCccc-------------------CC
Confidence 34788899999999998877 6664 47888999999999999999987765432 22
Q ss_pred ccccCCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 042075 897 PEYGLGSEVSINGDVYSYGILLLELVTRKKPTD 929 (1033)
Q Consensus 897 PE~~~~~~~~~~sDvwSlG~vl~elltg~~p~~ 929 (1033)
|.- .+..-=.-.+=|++..++.++..|+
T Consensus 136 P~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 136 PDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp SCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 321 1111123356678888888888764
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=55.09 E-value=9.5 Score=26.58 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=6.4
Q ss_pred hHHHHHHHHHHHH
Q 042075 659 LALAIISGLIGLS 671 (1033)
Q Consensus 659 ~~~~i~~~~~~~~ 671 (1033)
++.++++|++.++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 4455555555433
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=53.95 E-value=9.8 Score=26.12 Aligned_cols=7 Identities=57% Similarity=0.956 Sum_probs=2.8
Q ss_pred HHHHHHH
Q 042075 662 AIISGLI 668 (1033)
Q Consensus 662 ~i~~~~~ 668 (1033)
++++|.+
T Consensus 15 GiVvG~v 21 (38)
T 2k1k_A 15 AVIFGLL 21 (38)
T ss_dssp HHHHHHH
T ss_pred eeehHHH
Confidence 3444433
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=47.26 E-value=7.8 Score=25.92 Aligned_cols=6 Identities=33% Similarity=0.611 Sum_probs=2.4
Q ss_pred heeeec
Q 042075 679 ICLVRK 684 (1033)
Q Consensus 679 ~~~~~~ 684 (1033)
++++||
T Consensus 29 ~~iRRr 34 (35)
T 1iij_A 29 ILIKRR 34 (35)
T ss_dssp HHHHHC
T ss_pred eEEeec
Confidence 344443
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=46.27 E-value=20 Score=26.57 Aligned_cols=22 Identities=27% Similarity=0.301 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhe
Q 042075 659 LALAIISGLIGLSLALSFLIIC 680 (1033)
Q Consensus 659 ~~~~i~~~~~~~~~~~~~~~~~ 680 (1033)
+++++++|++.++++++.++.|
T Consensus 12 Ii~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 12 ILLSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4556667777666666666554
No 458
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=44.71 E-value=26 Score=26.06 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhe
Q 042075 659 LALAIISGLIGLSLALSFLIIC 680 (1033)
Q Consensus 659 ~~~~i~~~~~~~~~~~~~~~~~ 680 (1033)
+++++++|++.+.++++.++.|
T Consensus 15 Ii~svl~GLllL~li~~~LwK~ 36 (54)
T 2knc_A 15 VLVGVLGGLLLLTILVLAMWKV 36 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4556666766666666666555
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=43.18 E-value=1.4e+02 Score=31.70 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=73.7
Q ss_pred CccceecccCceeEEEEEeCCCCeEEEEEEeeccCchhHHHHHHHHHHHHhcCCCCceeEeeeecc-------------c
Q 042075 714 TSANLIGAGSFGSVYKGILDEGKTIVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSG-------------V 780 (1033)
Q Consensus 714 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------------~ 780 (1033)
..++....|.. .||.+.. ++..|+||-.. .-..+.+..++...-.+.-|+..-+ .+... .
T Consensus 72 ~~I~~s~~Gst-gvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv-~~~~~E~~e~~~~L~~~~~ 144 (342)
T 1cja_A 72 KGIERSEKGTE-GLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVV-SSNSEEGTNMLECLAAIDK 144 (342)
T ss_dssp EEEEECCSTTS-CEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEE-ESSSHHHHHHHHHHHHHCS
T ss_pred eEEEeccCCCC-CeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEE-eeCcHHHHHHHHHHHHhhh
Confidence 34455566654 5555554 36678899442 2233444455554445566653222 22100 0
Q ss_pred -----cccCCCceeEEEEcccCCchhhhcccCCCCccccccccccCHHHHHHHHHHHHHHHHHHHhCCCCC-cE-eccCC
Q 042075 781 -----DYQGNDFKALVFEFMHNRSLEEWLHPITREDETEEAPRSLNLLQRLDIGIDVACALSYLHHDCQPP-IV-HCDLK 853 (1033)
Q Consensus 781 -----~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-iv-HrDlk 853 (1033)
........+++|||++|..|.+.-.. .....+.......++ -+-+++.+..+.++- .+ +.--.
T Consensus 145 ~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~--------~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN 214 (342)
T 1cja_A 145 SFRVITTLANQANILLMELVRGITLNKLTTT--------SAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGN 214 (342)
T ss_dssp SSCHHHHHTTCSEEEEEECCCEEESTTCCSS--------SHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCC
T ss_pred hhHHHHHhhcccceehhhhcCCCccccchhh--------hhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCC
Confidence 00112245699999998776654321 011122322222211 133566666654321 11 12257
Q ss_pred CCCeEecCCCc-EEEeeccccee
Q 042075 854 PSNVLLDEEMI-AHVGDFGLATF 875 (1033)
Q Consensus 854 p~NIll~~~~~-~kL~DfG~a~~ 875 (1033)
+.|||+++++. +.++|-+.+..
T Consensus 215 ~~NIL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 215 LDNIMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp GGGEEEESBTTCEEECSCCCCCC
T ss_pred hhheEEeCCCCeEEEEcCCcccc
Confidence 89999987554 88999998864
No 460
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=42.59 E-value=15 Score=23.93 Aligned_cols=29 Identities=28% Similarity=0.455 Sum_probs=19.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhheeeecc
Q 042075 657 LKLALAIISGLIGLSLALSFLIICLVRKR 685 (1033)
Q Consensus 657 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 685 (1033)
..+++.+++|++++.+++.--+.+|+-||
T Consensus 6 l~malt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 6 LTMALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCceeEEEcccc
Confidence 45667777777777766666666665554
No 461
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=30.43 E-value=45 Score=23.37 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhe
Q 042075 659 LALAIISGLIGLSLALSFLIIC 680 (1033)
Q Consensus 659 ~~~~i~~~~~~~~~~~~~~~~~ 680 (1033)
+++++++|++.+.++++.++.+
T Consensus 13 Ii~s~l~GLllL~li~~~LwK~ 34 (42)
T 2k1a_A 13 VLVGVLGGLLLLTILVLAMWKV 34 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4556666666666665555544
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.32 E-value=67 Score=27.34 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=36.8
Q ss_pred CCCCccCCccccCCCCCCEEEcccCcccccCChhhhcCCCCcEEEcccc
Q 042075 389 NKIFGNIPAAFGKFVKLLRLEMWNNRLSGTIPPAIGELQNLRELRLQEN 437 (1033)
Q Consensus 389 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 437 (1033)
..++.+-..+|.++..|+.+.+-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3456666788888999999988765 45467778888999988888654
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.32 E-value=76 Score=27.00 Aligned_cols=45 Identities=16% Similarity=0.125 Sum_probs=22.6
Q ss_pred cCCCCCCCCCCCCCCcEEEcccCcCCCcCCccccccCCCCcccccc
Q 042075 192 LTGSIPPSFGNLSSISFLFLSRNNLDGSIPDTFGWLKNLVNLTMAQ 237 (1033)
Q Consensus 192 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 237 (1033)
++.+-...|.++++|+.+.+..+ ++.+-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33333445555555655555543 2324444555555555555543
No 464
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=23.47 E-value=17 Score=20.62 Aligned_cols=9 Identities=33% Similarity=1.150 Sum_probs=7.1
Q ss_pred CCcceeeeE
Q 042075 69 HFCQWHGVT 77 (1033)
Q Consensus 69 ~~c~w~gv~ 77 (1033)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999974
Done!