Your job contains 1 sequence.
>042079
MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL
GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP
TRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042079
(153 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102509 - symbol:RR17 "response regulator 17" ... 415 7.8e-39 1
UNIPROTKB|Q4GZK2 - symbol:rr9 "Type A response regulator ... 358 8.5e-33 1
UNIPROTKB|Q4GZK7 - symbol:rr4 "Type A response regulator ... 358 8.5e-33 1
TAIR|locus:2194584 - symbol:ARR4 "response regulator 4" s... 353 2.9e-32 1
TAIR|locus:2025911 - symbol:ARR3 "response regulator 3" s... 348 9.8e-32 1
TAIR|locus:2040282 - symbol:RR3 "response regulator 3" sp... 348 9.8e-32 1
TAIR|locus:2080590 - symbol:ARR9 "response regulator 9" s... 340 6.9e-31 1
TAIR|locus:2170723 - symbol:ARR6 "response regulator 6" s... 338 1.1e-30 1
TAIR|locus:2011286 - symbol:ARR7 "response regulator 7" s... 337 1.4e-30 1
TAIR|locus:2027237 - symbol:ARR15 "response regulator 15"... 337 1.4e-30 1
TAIR|locus:2097870 - symbol:RR5 "response regulator 5" sp... 337 1.4e-30 1
UNIPROTKB|Q4GZK8 - symbol:rr3 "Type A response regulator ... 300 1.2e-26 1
UNIPROTKB|Q4GZK5 - symbol:rr6 "Type A response regulator ... 285 4.6e-25 1
UNIPROTKB|Q4GZL0 - symbol:rr1 "Type A response regulator ... 244 1.0e-20 1
UNIPROTKB|Q4GZK3 - symbol:rr8 "Type A response regulator ... 213 2.0e-17 1
UNIPROTKB|Q4GZK4 - symbol:rr7 "Type A response regulator ... 202 2.9e-16 1
UNIPROTKB|Q4GZK9 - symbol:rr2 "Type A response regulator ... 179 7.9e-14 1
DICTYBASE|DDB_G0284331 - symbol:regA "response regulator ... 132 1.4e-07 1
UNIPROTKB|Q9WYT9 - symbol:TM_0468 "Response regulator" sp... 115 4.8e-07 1
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 124 6.8e-07 1
UNIPROTKB|Q9KKK8 - symbol:VC_A1096 "Chemotaxis protein Ch... 111 1.3e-06 1
TIGR_CMR|VC_A1096 - symbol:VC_A1096 "chemotaxis protein C... 111 1.3e-06 1
TIGR_CMR|BA_0996 - symbol:BA_0996 "sensor histidine kinas... 123 1.5e-06 1
UNIPROTKB|P71403 - symbol:cheY "Chemotaxis protein CheY h... 107 3.4e-06 1
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 117 5.0e-06 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 114 7.3e-06 1
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 115 8.9e-06 1
UNIPROTKB|Q0C4H5 - symbol:cheY "Chemotaxis protein CheY" ... 103 9.0e-06 1
UNIPROTKB|Q74DM7 - symbol:cheY34H-1 "Response receiver Ch... 103 9.0e-06 1
TIGR_CMR|GSU_1289 - symbol:GSU_1289 "chemotaxis protein C... 103 9.0e-06 1
UNIPROTKB|Q9KS16 - symbol:VC_1445 "Sensor histidine kinas... 113 9.8e-06 1
TIGR_CMR|VC_1445 - symbol:VC_1445 "sensor histidine kinas... 113 9.8e-06 1
TAIR|locus:2054895 - symbol:AT2G07440 species:3702 "Arabi... 102 1.1e-05 1
UNIPROTKB|Q8EC92 - symbol:cheV "Chemotaxis signal transdu... 108 1.3e-05 1
TIGR_CMR|SO_3252 - symbol:SO_3252 "chemotaxis protein Che... 108 1.3e-05 1
CGD|CAL0003344 - symbol:SLN1 species:5476 "Candida albica... 116 1.4e-05 1
UNIPROTKB|Q5A872 - symbol:SLN1 "Potential response regula... 116 1.4e-05 1
UNIPROTKB|Q8EEQ6 - symbol:cheY "Chemotaxis signal transdu... 101 1.5e-05 1
TIGR_CMR|CJE_1261 - symbol:CJE_1261 "chemotaxis protein C... 101 1.5e-05 1
TIGR_CMR|GSU_2535 - symbol:GSU_2535 "response regulator" ... 101 1.5e-05 1
TIGR_CMR|SO_2318 - symbol:SO_2318 "chemotaxis protein Che... 101 1.5e-05 1
TIGR_CMR|GSU_1320 - symbol:GSU_1320 "sigma-54 dependent D... 110 1.5e-05 1
TIGR_CMR|CPS_0081 - symbol:CPS_0081 "response regulator/G... 109 1.7e-05 1
UNIPROTKB|Q48GG3 - symbol:cheY2 "Chemotaxis protein CheY"... 100 1.9e-05 1
UNIPROTKB|Q9KQD5 - symbol:VC_2065 "Chemotaxis protein Che... 100 1.9e-05 1
TIGR_CMR|VC_2065 - symbol:VC_2065 "chemotaxis protein Che... 100 1.9e-05 1
UNIPROTKB|P0AE67 - symbol:cheY species:83333 "Escherichia... 98 3.0e-05 1
UNIPROTKB|Q4KG39 - symbol:cheY "Chemotaxis protein CheY" ... 98 3.0e-05 1
UNIPROTKB|Q55169 - symbol:rcp1 "Response regulator rcp1" ... 98 3.0e-05 1
TIGR_CMR|GSU_0598 - symbol:GSU_0598 "sigma-54 dependent D... 107 3.3e-05 1
UNIPROTKB|Q48ND2 - symbol:cheY1 "Chemotaxis protein CheY"... 97 3.9e-05 1
TIGR_CMR|CPS_1520 - symbol:CPS_1520 "chemotaxis protein C... 97 3.9e-05 1
TIGR_CMR|SO_0549 - symbol:SO_0549 "chemotaxis protein Che... 102 4.3e-05 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 105 5.4e-05 1
TIGR_CMR|GSU_2581 - symbol:GSU_2581 "sigma-54 dependent t... 104 6.6e-05 1
TIGR_CMR|GSU_1671 - symbol:GSU_1671 "response regulator/G... 101 8.1e-05 1
TIGR_CMR|GSU_1658 - symbol:GSU_1658 "response regulator/G... 103 8.6e-05 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 103 0.00010 1
TIGR_CMR|GSU_0372 - symbol:GSU_0372 "sigma-54 dependent D... 102 0.00011 1
TIGR_CMR|SPO_3037 - symbol:SPO_3037 "DNA-binding response... 98 0.00012 1
TIGR_CMR|SO_3209 - symbol:SO_3209 "chemotaxis protein Che... 92 0.00013 1
TIGR_CMR|SPO_0022 - symbol:SPO_0022 "response regulator" ... 101 0.00014 1
TIGR_CMR|CPS_3950 - symbol:CPS_3950 "response regulator/G... 102 0.00015 1
TIGR_CMR|GSU_1038 - symbol:GSU_1038 "sensory box histidin... 100 0.00021 1
UNIPROTKB|Q8EF67 - symbol:cheY "Chemotaxis signal transdu... 90 0.00021 1
TIGR_CMR|GSU_0403 - symbol:GSU_0403 "chemotaxis protein C... 90 0.00021 1
TIGR_CMR|SO_2120 - symbol:SO_2120 "chemotaxis protein Che... 90 0.00021 1
UNIPROTKB|Q9KUA1 - symbol:VC_0622 "Sensory box sensor his... 104 0.00022 1
TIGR_CMR|VC_0622 - symbol:VC_0622 "sensory box sensor his... 104 0.00022 1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 98 0.00023 1
TIGR_CMR|CPS_1474 - symbol:CPS_1474 "chemotaxis protein C... 96 0.00026 1
DICTYBASE|DDB_G0268012 - symbol:DDB_G0268012 "response re... 97 0.00029 1
UNIPROTKB|Q0BZW4 - symbol:pleD "Response regulator PleD" ... 94 0.00079 1
>TAIR|locus:2102509 [details] [associations]
symbol:RR17 "response regulator 17" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=TAS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005739 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K14492
EMBL:AF305722 EMBL:AL163972 IPI:IPI00540746 PIR:T49039
RefSeq:NP_567037.1 UniGene:At.5240 ProteinModelPortal:Q9FPR6
SMR:Q9FPR6 STRING:Q9FPR6 EnsemblPlants:AT3G56380.1 GeneID:824805
KEGG:ath:AT3G56380 GeneFarm:4130 TAIR:At3g56380 InParanoid:Q9FPR6
OMA:MEEELHV PhylomeDB:Q9FPR6 ProtClustDB:CLSN2917444
Genevestigator:Q9FPR6 GermOnline:AT3G56380 Uniprot:Q9FPR6
Length = 153
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 84/132 (63%), Positives = 101/132 (76%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DRK+VE +LK S+CKVTTAENG+RALE+LGL D Q Q ++L +N KVNL
Sbjct: 21 HVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQ-QTDSL-TNVMKVNL 78
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTG+ELLKK+K NIPTRIN+CL GAQMFM KPLK
Sbjct: 79 IITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKL 138
Query: 142 SDVKKLTGHLIN 153
SDV+KL HL+N
Sbjct: 139 SDVEKLKCHLLN 150
>UNIPROTKB|Q4GZK2 [details] [associations]
symbol:rr9 "Type A response regulator 9" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009735
GO:GO:0006355 GO:GO:0035556 GO:GO:0007623 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
EMBL:CM000136 EMBL:AJ938078 STRING:Q4GZK2 Uniprot:Q4GZK2
Length = 201
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 72/135 (53%), Positives = 93/135 (68%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +ALEFLGL D ++ + S+ +V
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEV 67
Query: 80 --NLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLK 137
NL+ITDYCMPGMTGY+LLKKIK NIP+RIN CLEEGA F LK
Sbjct: 68 AVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLK 127
Query: 138 PLKPSDVKKLTGHLI 152
P++ SD+ KL H++
Sbjct: 128 PVRLSDMSKLKPHIL 142
>UNIPROTKB|Q4GZK7 [details] [associations]
symbol:rr4 "Type A response regulator 4" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000126
EMBL:AJ938073 Uniprot:Q4GZK7
Length = 232
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK--- 78
HVLAVDDS++DRK++E LLKNS+ +VTT ++G +ALE LGL DE + ++ S+ +
Sbjct: 11 HVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQ 70
Query: 79 ---VNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LLK++K N+P RIN CLE+GA+ F
Sbjct: 71 EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFF 130
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP+K +D+KKL HL+
Sbjct: 131 LKPVKLADMKKLKSHLL 147
>TAIR|locus:2194584 [details] [associations]
symbol:ARR4 "response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010017
"red or far-red light signaling pathway" evidence=IMP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
[GO:0010114 "response to red light" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA;IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IGI] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0007623 GO:GO:0004674
GO:GO:0046777 GO:GO:0006351 GO:GO:0042752 GO:GO:0010114
GO:GO:0009793 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC007067 GO:GO:0010017
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2912722
EMBL:AB008487 EMBL:AB010915 EMBL:AF057282 IPI:IPI00523637
PIR:T48851 RefSeq:NP_172517.1 UniGene:At.22981 UniGene:At.67259
ProteinModelPortal:O82798 SMR:O82798 IntAct:O82798 STRING:O82798
EnsemblPlants:AT1G10470.1 GeneID:837587 KEGG:ath:AT1G10470
GeneFarm:4121 TAIR:At1g10470 InParanoid:O82798 OMA:KRIRDYM
PhylomeDB:O82798 Genevestigator:O82798 GermOnline:AT1G10470
Uniprot:O82798
Length = 259
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 72/130 (55%), Positives = 92/130 (70%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL +E+ + + KV+L
Sbjct: 35 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKA---SAEFDRLKVDL 91
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIK N+ TRI+ CLEEGAQ F+LKP+K
Sbjct: 92 IITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKL 151
Query: 142 SDVKKLTGHL 151
+DVK+L HL
Sbjct: 152 ADVKRLRSHL 161
>TAIR|locus:2025911 [details] [associations]
symbol:ARR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0010114
"response to red light" evidence=IMP] [GO:0010161 "red light
signaling pathway" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0007623 GO:GO:0006351 GO:GO:0042752 EMBL:AC007258
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008486 IPI:IPI00532280
PIR:T50853 RefSeq:NP_176202.1 UniGene:At.237
ProteinModelPortal:Q9ZWS9 SMR:Q9ZWS9 IntAct:Q9ZWS9 STRING:Q9ZWS9
EnsemblPlants:AT1G59940.1 GeneID:842288 KEGG:ath:AT1G59940
GeneFarm:4120 TAIR:At1g59940 eggNOG:COG3706 InParanoid:Q9ZWS9
OMA:RSEMIGI PhylomeDB:Q9ZWS9 ProtClustDB:CLSN2912722
Genevestigator:Q9ZWS9 GermOnline:AT1G59940 GO:GO:0010161
Uniprot:Q9ZWS9
Length = 231
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 70/130 (53%), Positives = 92/130 (70%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL D++ + + KV+L
Sbjct: 34 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAA---VEFDRLKVDL 90
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIK N+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 91 IITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKL 150
Query: 142 SDVKKLTGHL 151
+DVK+L +L
Sbjct: 151 ADVKRLRSYL 160
>TAIR|locus:2040282 [details] [associations]
symbol:RR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0007623 "circadian
rhythm" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0048831 "regulation of shoot system
development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
EMBL:AB010917 EMBL:AC005662 EMBL:AY074643 IPI:IPI00535987
PIR:T48853 RefSeq:NP_181663.1 UniGene:At.244
ProteinModelPortal:O80365 SMR:O80365 IntAct:O80365 STRING:O80365
EnsemblPlants:AT2G41310.1 GeneID:818730 KEGG:ath:AT2G41310
GeneFarm:4125 TAIR:At2g41310 InParanoid:O80365 OMA:METESKF
PhylomeDB:O80365 ProtClustDB:CLSN2683767 Genevestigator:O80365
GermOnline:AT2G41310 Uniprot:O80365
Length = 225
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 67/136 (49%), Positives = 93/136 (68%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG----- 76
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL + N L+++
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
++NL+ITDYCMPGMTGY+LLKK+K N+P RI+ CLEEGA+ F L
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLI 152
KP+K +D+ KL H++
Sbjct: 130 KPVKLADLTKLKPHMM 145
>TAIR|locus:2080590 [details] [associations]
symbol:ARR9 "response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;IMP;TAS] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 GO:GO:0009536 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623 GO:GO:0006351
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
ProtClustDB:CLSN2683767 EMBL:AB010918 EMBL:AL138655 EMBL:AY090234
EMBL:AY133571 IPI:IPI00543561 PIR:T47764 RefSeq:NP_191263.1
UniGene:At.245 ProteinModelPortal:O80366 SMR:O80366 IntAct:O80366
STRING:O80366 EnsemblPlants:AT3G57040.1 GeneID:824871
KEGG:ath:AT3G57040 GeneFarm:4126 TAIR:At3g57040 InParanoid:O80366
OMA:GISTDRA PhylomeDB:O80366 Genevestigator:O80366
GermOnline:AT3G57040 Uniprot:O80366
Length = 234
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 67/138 (48%), Positives = 92/138 (66%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN-N------LNS 74
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL + + N +N
Sbjct: 10 HVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNH 69
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMF 134
+VNL+ITDYCMPGMTGY+LLKK+K N+P RI+ CLEEGA+ F
Sbjct: 70 QVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEF 129
Query: 135 MLKPLKPSDVKKLTGHLI 152
LKP++ +D+ KL H++
Sbjct: 130 FLKPVRLADLNKLKPHMM 147
>TAIR|locus:2170723 [details] [associations]
symbol:ARR6 "response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009536 GO:GO:0006355 GO:GO:0006351 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2684027
EMBL:AB008489 EMBL:AB008491 EMBL:AB009053 EMBL:BT004799
IPI:IPI00547780 PIR:T50857 PIR:T50860 RefSeq:NP_201097.1
UniGene:At.24207 ProteinModelPortal:Q9ZWS6 SMR:Q9ZWS6 IntAct:Q9ZWS6
STRING:Q9ZWS6 EnsemblPlants:AT5G62920.1 GeneID:836412
KEGG:ath:AT5G62920 GeneFarm:4123 TAIR:At5g62920 InParanoid:Q9ZWS6
OMA:DDSQEIK PhylomeDB:Q9ZWS6 Genevestigator:Q9ZWS6
GermOnline:AT5G62920 Uniprot:Q9ZWS6
Length = 186
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 72/136 (52%), Positives = 92/136 (67%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
+P P HVLAVDDS VDRK +E LL+ S+CKVT ++ RAL++LGL D +E+ ++
Sbjct: 21 SPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL-DVEEK--SVGFED 77
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
KVNL++TDY MPGMTGYELLKKIK NI RI+ CLEEGA+ F+L
Sbjct: 78 LKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLL 137
Query: 137 KPLKPSDVKKLTGHLI 152
KP+K SDVK+L L+
Sbjct: 138 KPVKLSDVKRLRDSLM 153
>TAIR|locus:2011286 [details] [associations]
symbol:ARR7 "response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=RCA] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0010200 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492
ProtClustDB:CLSN2914197 eggNOG:COG3706 EMBL:AB008490 EMBL:AC068602
IPI:IPI00536268 PIR:T50854 RefSeq:NP_173339.1 UniGene:At.238
ProteinModelPortal:Q9ZWS7 SMR:Q9ZWS7 IntAct:Q9ZWS7 STRING:Q9ZWS7
EnsemblPlants:AT1G19050.1 GeneID:838487 KEGG:ath:AT1G19050
GeneFarm:4124 TAIR:At1g19050 InParanoid:Q9ZWS7 OMA:LRISSCK
PhylomeDB:Q9ZWS7 Genevestigator:Q9ZWS7 GermOnline:AT1G19050
GO:GO:0019827 Uniprot:Q9ZWS7
Length = 206
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 69/126 (54%), Positives = 90/126 (71%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSIVDRK++E LL+ S+CKVTT E+G RAL++LGL D + +NL KVNL
Sbjct: 25 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL-DGGKGASNLKD--LKVNL 81
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG++GY+LLKKIK NI RI ECL+EGA+ F+LKP+K
Sbjct: 82 IVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKL 141
Query: 142 SDVKKL 147
+DVK++
Sbjct: 142 ADVKRI 147
>TAIR|locus:2027237 [details] [associations]
symbol:ARR15 "response regulator 15" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IGI;RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC008263 EMBL:AC013258
EMBL:AF305720 IPI:IPI00538856 RefSeq:NP_177627.1 UniGene:At.11589
ProteinModelPortal:Q7G8V2 SMR:Q7G8V2 IntAct:Q7G8V2 STRING:Q7G8V2
EnsemblPlants:AT1G74890.1 GeneID:843828 KEGG:ath:AT1G74890
GeneFarm:4128 TAIR:At1g74890 HOGENOM:HOG000034820 InParanoid:Q7G8V2
KO:K14492 OMA:KISACKV PhylomeDB:Q7G8V2 ProtClustDB:CLSN2914197
Genevestigator:Q7G8V2 GermOnline:AT1G74890 Uniprot:Q7G8V2
Length = 206
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 70/126 (55%), Positives = 86/126 (68%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LLK SACKVTT E+G RAL++LGL D + L KVNL
Sbjct: 19 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL-DGDNGSSGLKD--LKVNL 75
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG+TGYELLKKIK NI RI +C+ EGA+ F+LKP+K
Sbjct: 76 IVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKL 135
Query: 142 SDVKKL 147
+DVK+L
Sbjct: 136 ADVKRL 141
>TAIR|locus:2097870 [details] [associations]
symbol:RR5 "response regulator 5" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0010114 "response to red light"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0010114 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AL049658
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008488 EMBL:AB010916
EMBL:AF057281 EMBL:AY072390 EMBL:AY114698 IPI:IPI00516847
PIR:T06673 PIR:T50855 PIR:T50856 RefSeq:NP_190393.1
UniGene:At.24915 ProteinModelPortal:Q9SB04 SMR:Q9SB04 IntAct:Q9SB04
STRING:Q9SB04 EnsemblPlants:AT3G48100.1 GeneID:823965
KEGG:ath:AT3G48100 GeneFarm:4122 TAIR:At3g48100 InParanoid:Q9SB04
OMA:LEANDIY PhylomeDB:Q9SB04 ProtClustDB:CLSN2684027
Genevestigator:Q9SB04 GermOnline:AT3G48100 Uniprot:Q9SB04
Length = 184
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 69/136 (50%), Positives = 92/136 (67%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
+PK HVLAVDDS+VDRK +E LL+ S+CKVT ++ RAL++LGL + E +++
Sbjct: 21 SPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGENNSSVGFED 78
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
K+NL++TDY MPGMTGYELLKKIK NI RI+ CLEEGA+ F+L
Sbjct: 79 LKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLL 138
Query: 137 KPLKPSDVKKLTGHLI 152
KP+K +DVK+L L+
Sbjct: 139 KPVKLADVKRLRDSLM 154
>UNIPROTKB|Q4GZK8 [details] [associations]
symbol:rr3 "Type A response regulator 3" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000127 EMBL:AJ938072
STRING:Q4GZK8 Uniprot:Q4GZK8
Length = 131
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 64/136 (47%), Positives = 87/136 (63%)
Query: 18 PKP-PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
P+P PHVLAVDDSIVDR ++ LL++S +VTT ++G RALE L L +N
Sbjct: 7 PEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSL-----DRN------ 55
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
V+++ITDYCMP MTG++LLK++K N PTRI CLEEGA+ F++
Sbjct: 56 --VHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLI 113
Query: 137 KPLKPSDVKKLTGHLI 152
KP++PSDV +L +I
Sbjct: 114 KPVRPSDVSRLCNRVI 129
>UNIPROTKB|Q4GZK5 [details] [associations]
symbol:rr6 "Type A response regulator 6" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AJ938075 ProteinModelPortal:Q4GZK5 KEGG:dosa:Os04t0673300-01
Gramene:Q4GZK5 Uniprot:Q4GZK5
Length = 170
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 62/130 (47%), Positives = 81/130 (62%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L++S +VTT E+ RALE L L L N VN+
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL--------GLVPN---VNM 99
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK++K N+P RI+ CLEEGA+ F+LKP++P
Sbjct: 100 IITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRP 159
Query: 142 SDVKKLTGHL 151
SDV +L +
Sbjct: 160 SDVSRLCSRI 169
>UNIPROTKB|Q4GZL0 [details] [associations]
symbol:rr1 "Type A response regulator 1" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CM000129 EMBL:AJ938070 eggNOG:NOG76823
Uniprot:Q4GZL0
Length = 231
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 55/129 (42%), Positives = 78/129 (60%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK----VTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDR++V+ LL +SAC V ++ +A+EFLGL +E ++Q
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQ--------A 61
Query: 79 VNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKP 138
+++V+TDYCMP MTGYELLK IK N P RI+ C+ GA+ F++KP
Sbjct: 62 IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKP 121
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 122 LQSKDVQRL 130
>UNIPROTKB|Q4GZK3 [details] [associations]
symbol:rr8 "Type A response regulator 8" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AJ938077 ProteinModelPortal:Q4GZK3
STRING:Q4GZK3 KEGG:dosa:Os08t0376700-01 KEGG:dosa:Os08t0377200-01
Gramene:Q4GZK3 Uniprot:Q4GZK3
Length = 121
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 49/131 (37%), Positives = 72/131 (54%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR +V L +VT E+ M+AL FL D + V+
Sbjct: 4 PHVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL---DSEHD----------VD 50
Query: 81 LVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLK 140
++++DYCMP MTGY LL ++K NIP RI +CL+ GA+ ++LKP+K
Sbjct: 51 MIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVK 110
Query: 141 PSDVKKLTGHL 151
DV ++ ++
Sbjct: 111 IVDVPRIMKYI 121
>UNIPROTKB|Q4GZK4 [details] [associations]
symbol:rr7 "Type A response regulator 7" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938076
ProteinModelPortal:Q4GZK4 KEGG:dosa:Os07t0449700-01 Gramene:Q4GZK4
Uniprot:Q4GZK4
Length = 206
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 51 ENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXX 110
++G RALE LG + N V+++ITDY MP MTGY+LLKKIK
Sbjct: 117 DSGKRALEILG-----SEPN--------VSMIITDYWMPEMTGYDLLKKIKESSELKQIP 163
Query: 111 XXXXXXXNIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
N+PTRI+ CLEEGA+ F+LKP++P+D+ ++T ++
Sbjct: 164 VVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRITSRML 205
Score = 95 (38.5 bits), Expect = 0.00015, P = 0.00015
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
PP+V+AVDDS VDR ++ LL+ S + ++G RALE LG
Sbjct: 90 PPYVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG 127
>UNIPROTKB|Q4GZK9 [details] [associations]
symbol:rr2 "Type A response regulator 2" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938071
ProteinModelPortal:Q4GZK9 KEGG:dosa:Os02t0557800-01 Gramene:Q4GZK9
Uniprot:Q4GZK9
Length = 252
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 42/108 (38%), Positives = 58/108 (53%)
Query: 47 VTTAENGMRALEFLGLVDEQEQQNNLNS-------NGTKVNLVITDYCMPGMTGYELLKK 99
VT ++G +A+E LG +S N +++V+TDYCMP MTGY+LLK
Sbjct: 45 VTAVDSGKKAMELLGRRRGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKA 104
Query: 100 IKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPSDVKKL 147
IK N P RI+ CL GA+ F+LKPLK +DV++L
Sbjct: 105 IKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKMNDVQRL 152
>DICTYBASE|DDB_G0284331 [details] [associations]
symbol:regA "response regulator receiver
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0051281
"positive regulation of release of sequestered calcium ion into
cytosol" evidence=IMP] [GO:0051279 "regulation of release of
sequestered calcium ion into cytosol" evidence=IMP] [GO:0046058
"cAMP metabolic process" evidence=IMP] [GO:0031276 "negative
regulation of lateral pseudopodium assembly" evidence=IMP]
[GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity"
evidence=IDA;IMP] [GO:0005622 "intracellular" evidence=TAS]
[GO:0006970 "response to osmotic stress" evidence=TAS] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0047555 "3',5'-cyclic-GMP phosphodiesterase
activity" evidence=IDA] [GO:0006198 "cAMP catabolic process"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0004114 "3',5'-cyclic-nucleotide
phosphodiesterase activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002073 InterPro:IPR003607
InterPro:IPR023088 InterPro:IPR023174 Pfam:PF00072 Pfam:PF00233
PRINTS:PR00387 PROSITE:PS00126 PROSITE:PS50110 SMART:SM00448
SMART:SM00471 dictyBase:DDB_G0284331 GO:GO:0005829
GenomeReviews:CM000153_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0030435 GO:GO:0030587 GO:GO:0005622 GO:GO:0006970
GO:GO:0051281 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:AAFI02000064 GO:GO:0030552 GO:GO:0031276
GO:GO:0004115 GO:GO:0006198 Gene3D:1.10.1300.10 EMBL:U60170
EMBL:AJ005398 RefSeq:XP_638612.1 ProteinModelPortal:Q23917
STRING:Q23917 EnsemblProtists:DDB0191479 GeneID:8624583
KEGG:ddi:DDB_G0284331 OMA:SHYETIC ProtClustDB:CLSZ2728943
Uniprot:Q23917
Length = 793
Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
+P +L DD V RKI+ NLLK VT NG A E++ N
Sbjct: 156 SPSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYI------------NKGQ 203
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRI-NECLEEGAQMFM 135
K +LV+TD MP +TG++LL++I + + N+ ++ G Q F+
Sbjct: 204 QKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFL 263
Query: 136 LKPLKPSDVKK 146
KP+ +KK
Sbjct: 264 TKPIAKELLKK 274
>UNIPROTKB|Q9WYT9 [details] [associations]
symbol:TM_0468 "Response regulator" species:243274
"Thermotoga maritima MSB8" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AE000512 GenomeReviews:AE000512_GR KO:K02485 EMBL:AGIJ01000001
PIR:D72374 RefSeq:NP_228278.1 PDB:3DGE PDB:3DGF PDB:3GL9
PDBsum:3DGE PDBsum:3DGF PDBsum:3GL9 IntAct:Q9WYT9 GeneID:897499
KEGG:tma:TM0468 PATRIC:23935833 OMA:WKRIPVI ProtClustDB:CLSK875163
EvolutionaryTrace:Q9WYT9 Uniprot:Q9WYT9
Length = 122
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 44/131 (33%), Positives = 56/131 (42%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS V RKIV LK +V AENG ALE L S T +L+
Sbjct: 5 VLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKL-------------SEFTP-DLI 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+ +LKK++ + L GA+ M KP PS
Sbjct: 51 VLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPS 110
Query: 143 DVKKLTGHLIN 153
+ HL+N
Sbjct: 111 QFIEEVKHLLN 121
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 124 (48.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 40/135 (29%), Positives = 65/135 (48%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P VLAVDD KI+E+LL++ VTT +ALE L +E +N
Sbjct: 14 PVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELL-----RENKN------- 61
Query: 78 KVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLK 137
K +LVI+D MP M G++LL+ + P + + + GA ++LK
Sbjct: 62 KFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSD---PKYVMKGVTHGACDYLLK 118
Query: 138 PLKPSDVKKLTGHLI 152
P++ ++K + H++
Sbjct: 119 PVRIEELKNIWQHVV 133
>UNIPROTKB|Q9KKK8 [details] [associations]
symbol:VC_A1096 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV
KO:K03413 HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1
ProteinModelPortal:Q9KKK8 DNASU:2612407 GeneID:2612407
KEGG:vch:VCA1096 PATRIC:20086710 ProtClustDB:CLSK789264
Uniprot:Q9KKK8
Length = 125
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + L+++ +V TA +G AL + + +++
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALA--------------KAQKARFDVI 55
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP MTG+E +K ++ P + E GA +++KP P
Sbjct: 56 ISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 115
Query: 143 DVKK 146
+ K
Sbjct: 116 TLLK 119
>TIGR_CMR|VC_A1096 [details] [associations]
symbol:VC_A1096 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV KO:K03413
HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1 ProteinModelPortal:Q9KKK8
DNASU:2612407 GeneID:2612407 KEGG:vch:VCA1096 PATRIC:20086710
ProtClustDB:CLSK789264 Uniprot:Q9KKK8
Length = 125
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + L+++ +V TA +G AL + + +++
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALA--------------KAQKARFDVI 55
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP MTG+E +K ++ P + E GA +++KP P
Sbjct: 56 ISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 115
Query: 143 DVKK 146
+ K
Sbjct: 116 TLLK 119
>TIGR_CMR|BA_0996 [details] [associations]
symbol:BA_0996 "sensor histidine kinase/response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR003018 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 Pfam:PF13185 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00065 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K03407
HSSP:P52934 RefSeq:NP_843497.1 RefSeq:YP_017624.1
RefSeq:YP_027206.1 ProteinModelPortal:Q81U88 DNASU:1088076
EnsemblBacteria:EBBACT00000011936 EnsemblBacteria:EBBACT00000016656
EnsemblBacteria:EBBACT00000023286 GeneID:1088076 GeneID:2814798
GeneID:2849014 KEGG:ban:BA_0996 KEGG:bar:GBAA_0996 KEGG:bat:BAS0932
HOGENOM:HOG000084747 OMA:TNNVFQE ProtClustDB:CLSK916050
BioCyc:BANT260799:GJAJ-1010-MONOMER
BioCyc:BANT261594:GJ7F-1055-MONOMER InterPro:IPR007891 Pfam:PF05227
Uniprot:Q81U88
Length = 896
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 IMIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>UNIPROTKB|P71403 [details] [associations]
symbol:cheY "Chemotaxis protein CheY homolog" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AE000511
GenomeReviews:AE000511_GR GO:GO:0001539 KO:K03413 EMBL:X81897
EMBL:U97567 EMBL:AF021090 PIR:C64653 RefSeq:NP_207858.1
RefSeq:YP_006934983.1 PDB:3GWG PDB:3H1E PDB:3H1F PDB:3H1G
PDBsum:3GWG PDBsum:3H1E PDBsum:3H1F PDBsum:3H1G
ProteinModelPortal:P71403 DIP:DIP-3256N MINT:MINT-160671
GeneID:13870261 GeneID:899603 KEGG:heo:C694_05515 KEGG:hpy:HP1067
PATRIC:20593473 OMA:DVLITDW ProtClustDB:CLSK872349
EvolutionaryTrace:P71403 Uniprot:P71403
Length = 124
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L + V AE+G+ A E L + N++ TKV
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL----------DANAD-TKV-- 49
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G +L+KK++ + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 117 (46.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R IV LL+N + +V A NG++A + L E NN +++V
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL------EDLNN------HIDIV 127
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + + +CL +GA F++KP++ +
Sbjct: 128 LTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 187
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 188 ELKILWQHV 196
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 114 (45.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P VLAVDD +I++ LL+ VTT ALE L +E +N
Sbjct: 14 PVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELL-----RENKN------- 61
Query: 78 KVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLK 137
K +LVI+D MP M G++LL+ + P + + ++ GA ++LK
Sbjct: 62 KFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSD---PKYVMKGVKHGACDYLLK 118
Query: 138 PLKPSDVKKLTGHLI 152
P++ ++K + H++
Sbjct: 119 PVRIEELKNIWQHVV 133
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 115 (45.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+P VL VDDS V RK+V LL++ +VT A +G+ AL +G +E
Sbjct: 544 RPLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIG----REA---------- 589
Query: 79 VNLVITDYCMPGMTGYELLKKIKXXXXXXXXXX--XXXXXXNIPTRINECLEEGAQMFML 136
+LV+ D MP M G+E ++ I+ + CLE GA ++
Sbjct: 590 FDLVLMDVQMPVMDGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEAGADDYLA 649
Query: 137 KPLKPSDVKKL 147
KP+ S+++++
Sbjct: 650 KPVNFSELRRV 660
>UNIPROTKB|Q0C4H5 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CP000158
GenomeReviews:CP000158_GR KO:K03413 RefSeq:YP_759368.1
ProteinModelPortal:Q0C4H5 STRING:Q0C4H5 GeneID:4290241
KEGG:hne:HNE_0639 PATRIC:32214082 OMA:WNMPVMN
BioCyc:HNEP228405:GI69-682-MONOMER Uniprot:Q0C4H5
Length = 121
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 32/115 (27%), Positives = 50/115 (43%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVI 83
L VDDS V RK+ ++++ VT A +G AL+ +E + ++
Sbjct: 5 LVVDDSRVVRKVASRIVRDLGFSVTEAGDGAEALKMC-----RESMPDA---------IL 50
Query: 84 TDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKP 138
D+ MP M G + L+ ++ N P INE L GA F++KP
Sbjct: 51 LDWNMPTMNGIDFLRALRREEGGKVPRIVFCSIENDPEHINEALRSGADEFIMKP 105
>UNIPROTKB|Q74DM7 [details] [associations]
symbol:cheY34H-1 "Response receiver CheY associated with
MCPs of class 34H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P08402
RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7 GeneID:2688101
KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC ProtClustDB:CLSK828284
BioCyc:GSUL243231:GH27-1257-MONOMER Uniprot:Q74DM7
Length = 121
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ VDDS R++V LK + V A +G AL L GT+V++V
Sbjct: 5 IMTVDDSASVRQMVSFTLKQNGYDVVEAVDGKDALAKLA--------------GTRVDMV 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP + G L+K ++ + +R E GA +++KP KP
Sbjct: 51 ITDLNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVKPFKPE 110
Query: 143 D----VKKLTG 149
VKK+ G
Sbjct: 111 QLVAVVKKVLG 121
>TIGR_CMR|GSU_1289 [details] [associations]
symbol:GSU_1289 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P08402 RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7
GeneID:2688101 KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC
ProtClustDB:CLSK828284 BioCyc:GSUL243231:GH27-1257-MONOMER
Uniprot:Q74DM7
Length = 121
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ VDDS R++V LK + V A +G AL L GT+V++V
Sbjct: 5 IMTVDDSASVRQMVSFTLKQNGYDVVEAVDGKDALAKLA--------------GTRVDMV 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP + G L+K ++ + +R E GA +++KP KP
Sbjct: 51 ITDLNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVKPFKPE 110
Query: 143 D----VKKLTG 149
VKK+ G
Sbjct: 111 QLVAVVKKVLG 121
>UNIPROTKB|Q9KS16 [details] [associations]
symbol:VC_1445 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198 RefSeq:NP_231088.1
ProteinModelPortal:Q9KS16 DNASU:2614077 GeneID:2614077
KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS ProtClustDB:CLSK874379
Uniprot:Q9KS16
Length = 572
Score = 113 (44.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 33/137 (24%), Positives = 62/137 (45%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N K H+L V+D+ ++ +++ LL VT AENG++A+E L ++N++
Sbjct: 450 NVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL-------EKNHV---- 498
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
+LV+ D MP M G K ++ + C++ G +L
Sbjct: 499 --FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQ--NCIDAGMNDIVL 554
Query: 137 KPLKPSDVKKLTGHLIN 153
KP++ D+ ++ +N
Sbjct: 555 KPIRSKDIMEVVKRFLN 571
>TIGR_CMR|VC_1445 [details] [associations]
symbol:VC_1445 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198
RefSeq:NP_231088.1 ProteinModelPortal:Q9KS16 DNASU:2614077
GeneID:2614077 KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS
ProtClustDB:CLSK874379 Uniprot:Q9KS16
Length = 572
Score = 113 (44.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 33/137 (24%), Positives = 62/137 (45%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N K H+L V+D+ ++ +++ LL VT AENG++A+E L ++N++
Sbjct: 450 NVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL-------EKNHV---- 498
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
+LV+ D MP M G K ++ + C++ G +L
Sbjct: 499 --FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQ--NCIDAGMNDIVL 554
Query: 137 KPLKPSDVKKLTGHLIN 153
KP++ D+ ++ +N
Sbjct: 555 KPIRSKDIMEVVKRFLN 571
>TAIR|locus:2054895 [details] [associations]
symbol:AT2G07440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006217
IPI:IPI00531473 PIR:H84485 RefSeq:NP_178754.1 UniGene:At.63414
ProteinModelPortal:Q9ZQJ8 SMR:Q9ZQJ8 EnsemblPlants:AT2G07440.1
GeneID:815313 KEGG:ath:AT2G07440 TAIR:At2g07440 InParanoid:Q9ZQJ8
PhylomeDB:Q9ZQJ8 ArrayExpress:Q9ZQJ8 Genevestigator:Q9ZQJ8
Uniprot:Q9ZQJ8
Length = 136
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 118 NIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
N+PTRI+ CLE+GA+ F LKP+K D KL H++
Sbjct: 25 NVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMM 59
>UNIPROTKB|Q8EC92 [details] [associations]
symbol:cheV "Chemotaxis signal transduction system response
regulator CheV" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0016740 GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 SUPFAM:SSF50341
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
OMA:QVSRCLQ RefSeq:NP_718806.1 ProteinModelPortal:Q8EC92
GeneID:1170945 KEGG:son:SO_3252 PATRIC:23526188
ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H++ +DDS V RK + L++ ++ TA++G AL+ L + + NN+ ++ L
Sbjct: 180 HIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAI--ASEMNNV---ADEIPL 234
Query: 82 VITDYCMPGMTGYELLKKIK 101
+I+D MP M GY L +I+
Sbjct: 235 IISDIEMPEMDGYTLTAEIR 254
>TIGR_CMR|SO_3252 [details] [associations]
symbol:SO_3252 "chemotaxis protein CheV" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
SUPFAM:SSF50341 HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181
PIRSF:PIRSF002867 OMA:QVSRCLQ RefSeq:NP_718806.1
ProteinModelPortal:Q8EC92 GeneID:1170945 KEGG:son:SO_3252
PATRIC:23526188 ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H++ +DDS V RK + L++ ++ TA++G AL+ L + + NN+ ++ L
Sbjct: 180 HIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAI--ASEMNNV---ADEIPL 234
Query: 82 VITDYCMPGMTGYELLKKIK 101
+I+D MP M GY L +I+
Sbjct: 235 IISDIEMPEMDGYTLTAEIR 254
>CGD|CAL0003344 [details] [associations]
symbol:SLN1 species:5476 "Candida albicans" [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IGI]
[GO:0004673 "protein histidine kinase activity" evidence=ISS;IDA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0006469
"negative regulation of protein kinase activity" evidence=IEA]
[GO:0005034 "osmosensor activity" evidence=IEA] [GO:0009927
"histidine phosphotransfer kinase activity" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 CGD:CAL0003344 GO:GO:0016021
GO:GO:0005524 GO:GO:0036180 GO:GO:1900445 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673 EMBL:AACQ01000049
EMBL:AACQ01000048 GO:GO:0007234 GO:GO:0097308 KO:K11231
RefSeq:XP_717880.1 RefSeq:XP_717946.1 ProteinModelPortal:Q5A872
SMR:Q5A872 STRING:Q5A872 GeneID:3640422 GeneID:3640485
KEGG:cal:CaO19.10766 KEGG:cal:CaO19.3256 Uniprot:Q5A872
Length = 1373
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC-KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL +D+ V+++++ +LK +T A NG +A++F+ ++ +NN N +L
Sbjct: 1246 VLVAEDNSVNQEVISRMLKQEGITNLTMACNGAKAIDFV----KESIENNEN-----FDL 1296
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ D MP + G + K I+ + + + ECL G F+ KP+
Sbjct: 1297 IFMDVQMPEVDGLKATKMIRKNLQYNKPIIALTAFAD-ESNVKECLNSGMSGFITKPISK 1355
Query: 142 SDVKKL 147
+++KK+
Sbjct: 1356 TNIKKV 1361
>UNIPROTKB|Q5A872 [details] [associations]
symbol:SLN1 "Potential response regulator protein"
species:237561 "Candida albicans SC5314" [GO:0004673 "protein
histidine kinase activity" evidence=ISS;IDA] [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IGI]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 CGD:CAL0003344 GO:GO:0016021
GO:GO:0005524 GO:GO:0036180 GO:GO:1900445 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673 EMBL:AACQ01000049
EMBL:AACQ01000048 GO:GO:0007234 GO:GO:0097308 KO:K11231
RefSeq:XP_717880.1 RefSeq:XP_717946.1 ProteinModelPortal:Q5A872
SMR:Q5A872 STRING:Q5A872 GeneID:3640422 GeneID:3640485
KEGG:cal:CaO19.10766 KEGG:cal:CaO19.3256 Uniprot:Q5A872
Length = 1373
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC-KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL +D+ V+++++ +LK +T A NG +A++F+ ++ +NN N +L
Sbjct: 1246 VLVAEDNSVNQEVISRMLKQEGITNLTMACNGAKAIDFV----KESIENNEN-----FDL 1296
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ D MP + G + K I+ + + + ECL G F+ KP+
Sbjct: 1297 IFMDVQMPEVDGLKATKMIRKNLQYNKPIIALTAFAD-ESNVKECLNSGMSGFITKPISK 1355
Query: 142 SDVKKL 147
+++KK+
Sbjct: 1356 TNIKKV 1361
>UNIPROTKB|Q8EEQ6 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:KLANYKF
HSSP:P06143 RefSeq:NP_717910.1 ProteinModelPortal:Q8EEQ6
GeneID:1170042 KEGG:son:SO_2318 PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/119 (28%), Positives = 52/119 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R +V L+ + +V A +G AL L NG K+NL+
Sbjct: 4 ILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALSKL--------------NGDKINLI 49
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
I+D MP M G LK++K ++ E GA+ +++KP +P
Sbjct: 50 ISDVNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKPFQP 108
>TIGR_CMR|CJE_1261 [details] [associations]
symbol:CJE_1261 "chemotaxis protein CheY" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413
OMA:DVLITDW ProtClustDB:CLSK872349 RefSeq:YP_179249.1
ProteinModelPortal:Q5HTY6 STRING:Q5HTY6 GeneID:3231768
KEGG:cjr:CJE1261 PATRIC:20044318
BioCyc:CJEJ195099:GJC0-1287-MONOMER Uniprot:Q5HTY6
Length = 130
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L V AE+G+ A + L + V +
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-------------TKNEDVKV 49
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>TIGR_CMR|GSU_2535 [details] [associations]
symbol:GSU_2535 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953581.1 ProteinModelPortal:Q74A55 GeneID:2687797
KEGG:gsu:GSU2535 PATRIC:22027919 OMA:DLGCNVY
BioCyc:GSUL243231:GH27-2511-MONOMER Uniprot:Q74A55
Length = 147
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 23 VLAVDDSIVDRKIVE-NLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
+L VDD +++E +L + + V +NG RAL+F+ E E L +
Sbjct: 9 ILLVDDDRGHARLIEKHLARMGGMQHVIWLDNGRRALDFIFEEGEFEGVKTL-----RPC 63
Query: 81 LVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPL 139
LVI D MP + G +L ++K + P I C E G F+ KP+
Sbjct: 64 LVIADLNMPELGGVHVLSRLKGDERTSSIAVVILTTSDNPAEIEACHELGCDAFLRKPM 122
>TIGR_CMR|SO_2318 [details] [associations]
symbol:SO_2318 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:KLANYKF HSSP:P06143 RefSeq:NP_717910.1
ProteinModelPortal:Q8EEQ6 GeneID:1170042 KEGG:son:SO_2318
PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/119 (28%), Positives = 52/119 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R +V L+ + +V A +G AL L NG K+NL+
Sbjct: 4 ILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALSKL--------------NGDKINLI 49
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
I+D MP M G LK++K ++ E GA+ +++KP +P
Sbjct: 50 ISDVNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKPFQP 108
>TIGR_CMR|GSU_1320 [details] [associations]
symbol:GSU_1320 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 KO:K02481
HSSP:P06143 RefSeq:NP_952373.2 GeneID:2686471 KEGG:gsu:GSU1320
PATRIC:22025417 ProtClustDB:CLSK828298
BioCyc:GSUL243231:GH27-1307-MONOMER Uniprot:Q74DJ6
Length = 461
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/130 (30%), Positives = 58/130 (44%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+P VL VDD + R+++E L+ V TA +G L L DE+
Sbjct: 7 QPARVLIVDDDVSLRRVLEYNLQEEGYDVITAGSGEEGLR---LFDERSPA--------- 54
Query: 79 VNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKP 138
LV+TD MPGM G+ LL++IK + T + + ++ GA ++ KP
Sbjct: 55 --LVVTDLKMPGMGGFRLLQEIKGRSPDTAVIVITAFGA-VETAV-DAMKAGAYDYITKP 110
Query: 139 LKPSDVKKLT 148
D KLT
Sbjct: 111 FN-RDALKLT 119
>TIGR_CMR|CPS_0081 [details] [associations]
symbol:CPS_0081 "response regulator/GGDEF domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 RefSeq:YP_266849.1
ProteinModelPortal:Q48AR4 STRING:Q48AR4 DNASU:3523347
GeneID:3523347 KEGG:cps:CPS_0081 PATRIC:21463585
HOGENOM:HOG000276492 OMA:CPEEFYC ProtClustDB:CLSK2309571
BioCyc:CPSY167879:GI48-184-MONOMER Uniprot:Q48AR4
Length = 419
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/121 (30%), Positives = 50/121 (41%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R + LLK V TA NG++ALE L Q N + +V
Sbjct: 126 ILVVDDSSSARNHIVELLKRRNFNVITANNGVQALEKLA------QHKN-------IKMV 172
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP M G EL +I+ + ++ GA F+ KP P
Sbjct: 173 ITDLEMPAMDGIELTNEIRRVYTREQLAVIGISGASNGIHSARFIKNGADDFLRKPFCPE 232
Query: 143 D 143
+
Sbjct: 233 E 233
>UNIPROTKB|Q48GG3 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_275520.1
ProteinModelPortal:Q48GG3 SMR:Q48GG3 STRING:Q48GG3 GeneID:3558182
KEGG:psp:PSPPH_3362 PATRIC:19976130 OMA:GHYDFLV
ProtClustDB:CLSK642753 Uniprot:Q48GG3
Length = 124
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+I++NLL++ T+ A++G+ AL L +G +
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPML-------------QSGA-FDF 48
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
++TD+ MPGMTG +LL++++ +I E + G +++KP
Sbjct: 49 LVTDWNMPGMTGIDLLRQVRADERLKSLPVLMVTAEAKREQIIEAAQAGVNGYVVKPFTA 108
Query: 142 SDVKK 146
+K+
Sbjct: 109 QALKE 113
>UNIPROTKB|Q9KQD5 [details] [associations]
symbol:VC_2065 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:GHYDFLV HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1
ProteinModelPortal:Q9KQD5 SMR:Q9KQD5 DNASU:2613445 GeneID:2613445
KEGG:vch:VC2065 PATRIC:20083164 ProtClustDB:CLSK874661
Uniprot:Q9KQD5
Length = 130
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+IV+NLL++ T A++G+ AL L D +
Sbjct: 11 ILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD--------------FDF 56
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LLK I+ +I E + G +++KP
Sbjct: 57 VVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTA 116
Query: 142 SDVKK 146
+ +K+
Sbjct: 117 ATLKE 121
>TIGR_CMR|VC_2065 [details] [associations]
symbol:VC_2065 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:GHYDFLV
HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1 ProteinModelPortal:Q9KQD5
SMR:Q9KQD5 DNASU:2613445 GeneID:2613445 KEGG:vch:VC2065
PATRIC:20083164 ProtClustDB:CLSK874661 Uniprot:Q9KQD5
Length = 130
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+IV+NLL++ T A++G+ AL L D +
Sbjct: 11 ILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD--------------FDF 56
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LLK I+ +I E + G +++KP
Sbjct: 57 VVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTA 116
Query: 142 SDVKK 146
+ +K+
Sbjct: 117 ATLKE 121
>UNIPROTKB|P0AE67 [details] [associations]
symbol:cheY species:83333 "Escherichia coli K-12"
[GO:0006473 "protein acetylation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0060286 "flagellar cell motility" evidence=TAS]
[GO:0006935 "chemotaxis" evidence=IEA;IMP;TAS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IMP] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0000287 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006935 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000160
PDB:1BDJ PDBsum:1BDJ HOGENOM:HOG000034820 GO:GO:0006473
GO:GO:0060286 PDB:1A0O PDB:1EAY PDB:1FFG PDB:1FFS PDB:1FFW PDB:2LP4
PDBsum:1A0O PDBsum:1EAY PDBsum:1FFG PDBsum:1FFS PDBsum:1FFW
PDBsum:2LP4 EMBL:M13463 EMBL:K02175 PIR:E25195 RefSeq:NP_416396.1
RefSeq:YP_490144.1 PDB:1AB5 PDB:1AB6 PDB:1C4W PDB:1CEY PDB:1CHN
PDB:1CYE PDB:1D4Z PDB:1DJM PDB:1E6K PDB:1E6L PDB:1E6M PDB:1EHC
PDB:1F4V PDB:1FQW PDB:1HEY PDB:1JBE PDB:1KMI PDB:1MIH PDB:1U8T
PDB:1UDR PDB:1VLZ PDB:1YMU PDB:1YMV PDB:1ZDM PDB:2B1J PDB:2ID7
PDB:2ID9 PDB:2IDM PDB:3CHY PDB:3F7N PDB:3FFT PDB:3FFW PDB:3FFX
PDB:3FGZ PDB:3MYY PDB:3OLV PDB:3OLW PDB:3OLX PDB:3OLY PDB:3OO0
PDB:3OO1 PDB:3RVJ PDB:3RVK PDB:3RVL PDB:3RVM PDB:3RVN PDB:3RVO
PDB:3RVP PDB:3RVQ PDB:3RVR PDB:3RVS PDB:5CHY PDB:6CHY PDBsum:1AB5
PDBsum:1AB6 PDBsum:1C4W PDBsum:1CEY PDBsum:1CHN PDBsum:1CYE
PDBsum:1D4Z PDBsum:1DJM PDBsum:1E6K PDBsum:1E6L PDBsum:1E6M
PDBsum:1EHC PDBsum:1F4V PDBsum:1FQW PDBsum:1HEY PDBsum:1JBE
PDBsum:1KMI PDBsum:1MIH PDBsum:1U8T PDBsum:1UDR PDBsum:1VLZ
PDBsum:1YMU PDBsum:1YMV PDBsum:1ZDM PDBsum:2B1J PDBsum:2ID7
PDBsum:2ID9 PDBsum:2IDM PDBsum:3CHY PDBsum:3F7N PDBsum:3FFT
PDBsum:3FFW PDBsum:3FFX PDBsum:3FGZ PDBsum:3MYY PDBsum:3OLV
PDBsum:3OLW PDBsum:3OLX PDBsum:3OLY PDBsum:3OO0 PDBsum:3OO1
PDBsum:3RVJ PDBsum:3RVK PDBsum:3RVL PDBsum:3RVM PDBsum:3RVN
PDBsum:3RVO PDBsum:3RVP PDBsum:3RVQ PDBsum:3RVR PDBsum:3RVS
PDBsum:5CHY PDBsum:6CHY ProteinModelPortal:P0AE67 SMR:P0AE67
DIP:DIP-48237N IntAct:P0AE67 SWISS-2DPAGE:P0AE67 PRIDE:P0AE67
EnsemblBacteria:EBESCT00000000750 EnsemblBacteria:EBESCT00000017790
GeneID:12930559 GeneID:946393 KEGG:ecj:Y75_p1858 KEGG:eco:b1882
PATRIC:32119091 EchoBASE:EB0148 EcoGene:EG10150 KO:K03413
OMA:FGFVISD ProtClustDB:PRK10610 BioCyc:EcoCyc:CHEY-MONOMER
BioCyc:ECOL316407:JW1871-MONOMER EvolutionaryTrace:P0AE67
Genevestigator:P0AE67 Uniprot:P0AE67
Length = 129
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 37/124 (29%), Positives = 52/124 (41%)
Query: 24 LAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
L VDD R+IV NLLK V AE+G+ AL N L + G V
Sbjct: 9 LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG--YGFV 54
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
I+D+ MP M G ELLK I+ I + GA +++KP +
Sbjct: 55 ISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAA 114
Query: 143 DVKK 146
+++
Sbjct: 115 TLEE 118
>UNIPROTKB|Q4KG39 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:220664
"Pseudomonas protegens Pf-5" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0005622 GO:GO:0006935
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 OMA:FGFVISD RefSeq:YP_258794.1
ProteinModelPortal:Q4KG39 SMR:Q4KG39 STRING:Q4KG39 GeneID:3477601
KEGG:pfl:PFL_1668 PATRIC:19872565 ProtClustDB:CLSK715044
BioCyc:PFLU220664:GIX8-1676-MONOMER Uniprot:Q4KG39
Length = 123
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/125 (24%), Positives = 56/125 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+I++NLL++ T A++G A+ L N ++
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVL--------------NSGSIDF 48
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
++TD+ MPGMTG +LL+ ++ +I E + G +++KP
Sbjct: 49 LVTDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKPFTA 108
Query: 142 SDVKK 146
+K+
Sbjct: 109 QALKE 113
>UNIPROTKB|Q55169 [details] [associations]
symbol:rcp1 "Response regulator rcp1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:BA000022 GenomeReviews:BA000022_GR
HOGENOM:HOG000034820 PIR:S74390 RefSeq:NP_442238.1
RefSeq:YP_005652298.1 PDB:1I3C PDB:1JLK PDBsum:1I3C PDBsum:1JLK
ProteinModelPortal:Q55169 SMR:Q55169 IntAct:Q55169 STRING:Q55169
GeneID:12253517 GeneID:952559 KEGG:syn:slr0474 KEGG:syy:SYNGTS_2345
PATRIC:23842114 KO:K11355 OMA:YELHVNC ProtClustDB:CLSK893477
EvolutionaryTrace:Q55169 Uniprot:Q55169
Length = 147
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSAC--KVTTAENGMRALEFLGLVDEQEQQNNLNS 74
NP P +L V+DS D ++V+ +LK S ++ +G+ A+ FL QQ
Sbjct: 6 NP-PKVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFL-------QQQGEYE 57
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIK 101
N + NL++ D +P G E+L +IK
Sbjct: 58 NSPRPNLILLDLNLPKKDGREVLAEIK 84
>TIGR_CMR|GSU_0598 [details] [associations]
symbol:GSU_0598 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_951656.1 ProteinModelPortal:Q74FK9 GeneID:2688651
KEGG:gsu:GSU0598 PATRIC:22023947 OMA:SGMEVLK ProtClustDB:CLSK827940
BioCyc:GSUL243231:GH27-583-MONOMER Uniprot:Q74FK9
Length = 470
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD + R+ + +L+ V T+ +G ALE L Q N LV
Sbjct: 6 VLVVDDEAIIREGLRRILEKEGYHVETSASGQIALERL-------QDENYG-------LV 51
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
ITD MPGM+G E+LK IK + T + E ++ GA ++ KP P
Sbjct: 52 ITDLKMPGMSGMEVLKAIKVLQPEVPVIIITGFST-VDTAV-EAMKNGAFDYIAKPFTPD 109
Query: 143 DV 144
+
Sbjct: 110 QI 111
>UNIPROTKB|Q48ND2 [details] [associations]
symbol:cheY1 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_273089.1
ProteinModelPortal:Q48ND2 STRING:Q48ND2 GeneID:3556464
KEGG:psp:PSPPH_0807 PATRIC:19970685 OMA:KLANYKF
ProtClustDB:CLSK642719 Uniprot:Q48ND2
Length = 122
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS R++V LK++ V A +G AL L G KV+L+
Sbjct: 5 VLVVDDSSSVRQVVGIALKSAGYDVIEACDGKDALGKL--------------TGQKVHLI 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G +K++K + ++ E GA+ +++KP +P+
Sbjct: 51 ISDVNMPNMDGITFVKEVKKLASYKFTPIIMLTTESQESKKAEGQAAGAKAWVVKPFQPA 110
Query: 143 DVKKLTGHLI 152
+ LI
Sbjct: 111 QMLAAVSKLI 120
>TIGR_CMR|CPS_1520 [details] [associations]
symbol:CPS_1520 "chemotaxis protein CheY" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 OMA:LEANDIY
KO:K03413 RefSeq:YP_268262.1 ProteinModelPortal:Q485K3 SMR:Q485K3
STRING:Q485K3 GeneID:3522501 KEGG:cps:CPS_1520 PATRIC:21466247
BioCyc:CPSY167879:GI48-1601-MONOMER Uniprot:Q485K3
Length = 127
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 23 VLAVDDSIVDRKIVENLLKNSA-CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDD R+IV+NLL++ + A++G AL L G +
Sbjct: 7 VLVVDDFSTMRRIVKNLLRDLGFTNIQEADDGNTALPML--------------QGGDFDF 52
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LLK I+ +I + G +++KP
Sbjct: 53 VVTDWNMPGMQGIDLLKAIRADANLSHIPVLLITAEAKKEQIIMAAQAGVNGYIVKPFTA 112
Query: 142 SDVK 145
+ +K
Sbjct: 113 ATLK 116
>TIGR_CMR|SO_0549 [details] [associations]
symbol:SO_0549 "chemotaxis protein CheY/response regulator
receiver domain protein" species:211586 "Shewanella oneidensis
MR-1" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P06657
KO:K03413 RefSeq:NP_716185.2 ProteinModelPortal:Q8EJB8
GeneID:1168418 KEGG:son:SO_0549 PATRIC:23520780
HOGENOM:HOG000221832 OMA:SEANDAH ProtClustDB:CLSK905805
Uniprot:Q8EJB8
Length = 265
Score = 102 (41.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS + R +++ + N K +T AE+G +A+E + ++N+ +L
Sbjct: 147 VLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAIELM--------RHNM------FDL 192
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MP + G L + I+ ++ + G KP +P
Sbjct: 193 IITDYNMPSVDGLALTQFIRSESQQSHVPILMVSSEANDAHLSNVSQAGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
VK+L L+
Sbjct: 253 KLVKQLLYQLL 263
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 105 (42.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+I+ LL+ KV +G+ A E L +E+ +N ++L+
Sbjct: 39 VLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-----KEKSHN-------IDLI 86
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++G+ LL + + + +C+ GA +++KP++ +
Sbjct: 87 LTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKN 146
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 147 ELKNLWQHV 155
>TIGR_CMR|GSU_2581 [details] [associations]
symbol:GSU_2581 "sigma-54 dependent transcriptional
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025944 PROSITE:PS00688 HSSP:P06143 RefSeq:NP_953627.1
ProteinModelPortal:Q74A10 GeneID:2687775 KEGG:gsu:GSU2581
PATRIC:22028017 OMA:LTERIMA ProtClustDB:CLSK763211
BioCyc:GSUL243231:GH27-2558-MONOMER Uniprot:Q74A10
Length = 456
Score = 104 (41.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +LAVDD + ++ENLL ++ TA +G +AL L E+E V+
Sbjct: 4 PKILAVDDDELSLLMLENLLADAGFAPLTAVSGAQALALL----EREH----------VD 49
Query: 81 LVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLK 140
L+I+D M GM G ELL +++ ++ + + E + GA ++ KP
Sbjct: 50 LLISDLIMEGMNGLELLDRVRERYPNVPVIVVTARG-SVESAV-EAMRRGAYDYLAKPFN 107
Query: 141 P 141
P
Sbjct: 108 P 108
>TIGR_CMR|GSU_1671 [details] [associations]
symbol:GSU_1671 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P06143 HOGENOM:HOG000167205 RefSeq:NP_952722.1
ProteinModelPortal:Q74CK2 GeneID:2687445 KEGG:gsu:GSU1671
PATRIC:22026193 OMA:IADWLMP ProtClustDB:CLSK740862
BioCyc:GSUL243231:GH27-1671-MONOMER Uniprot:Q74CK2
Length = 322
Score = 101 (40.6 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 35/122 (28%), Positives = 53/122 (43%)
Query: 18 PKPPH-VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
P+ P +L VDD+ + R ++E LK++ V AENG ALE N
Sbjct: 12 PRFPFPILIVDDNRLLRTMLETSLKSAGYDVVMAENGKEALEIF--------------NK 57
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
+V+TD+ MP M G EL + I+ + + LE GA +++
Sbjct: 58 GYYPIVMTDWVMPEMDGLELCRAIRADCSGRYTYIILLTSQDSKNDVIAGLEAGADEYLV 117
Query: 137 KP 138
KP
Sbjct: 118 KP 119
>TIGR_CMR|GSU_1658 [details] [associations]
symbol:GSU_1658 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 KO:K02488 HSSP:P06143 RefSeq:NP_952709.1
ProteinModelPortal:Q74CL4 GeneID:2685291 KEGG:gsu:GSU1658
PATRIC:22026165 HOGENOM:HOG000131459 OMA:NINFLEE
ProtClustDB:CLSK924527 BioCyc:GSUL243231:GH27-1650-MONOMER
Uniprot:Q74CL4
Length = 458
Score = 103 (41.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L V+D R++ +LLK +V T +G L+ L ++QE +LV
Sbjct: 4 ILVVEDDRFFRQMYVDLLKEEGYEVDTVASGTEGLKRL---EKQEY-----------HLV 49
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
ITD MPGM+G E+L ++K N+ + + L+ GA+ ++LKP
Sbjct: 50 ITDLVMPGMSGIEVLSRVKQKAPNVDVILVTGHA-NLESAVY-ALKNGARDYILKPFNHD 107
Query: 143 DVK 145
+ K
Sbjct: 108 EFK 110
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
Identities = 38/136 (27%), Positives = 69/136 (50%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
+P VL VDD KI+E +LK + +VTT G+ A E L L+ E++ +G
Sbjct: 7 SPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTC--GL-AREALRLLRERK-------DG 56
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
++VI+D MP M G++LL+ + + R+ + ++ GA ++L
Sbjct: 57 --YDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETS---RVMKGVQHGACDYLL 111
Query: 137 KPLKPSDVKKLTGHLI 152
KP++ ++K + H++
Sbjct: 112 KPIRMKELKIIWQHVL 127
>TIGR_CMR|GSU_0372 [details] [associations]
symbol:GSU_0372 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 PROSITE:PS00675
PROSITE:PS00676 HSSP:P10957 RefSeq:NP_951431.2 GeneID:2686674
KEGG:gsu:GSU0372 PATRIC:22023488 ProtClustDB:CLSK827784
BioCyc:GSUL243231:GH27-388-MONOMER Uniprot:Q74G75
Length = 455
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P +L VDD R+I++ +L+ + TTA G AL L+DE+E
Sbjct: 2 PATILIVDDERGQREILQTILEGERYETTTAAGGQEAL---ALLDERE-----------F 47
Query: 80 NLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPL 139
++++TD M GM+G ELL+++ + + + E +++GA ++ KPL
Sbjct: 48 DVILTDLKMQGMSGMELLERL-LAADPQQCIIMMTAHGTVDSAV-EAMKKGAFDYLEKPL 105
Query: 140 K 140
+
Sbjct: 106 E 106
>TIGR_CMR|SPO_3037 [details] [associations]
symbol:SPO_3037 "DNA-binding response regulator, LysR
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000847 InterPro:IPR001789
Pfam:PF00072 Pfam:PF00126 PRINTS:PR00039 PROSITE:PS50110
PROSITE:PS50931 SMART:SM00448 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:YP_168241.1
ProteinModelPortal:Q5LP15 DNASU:3195987 GeneID:3195987
KEGG:sil:SPO3037 PATRIC:23379513 Uniprot:Q5LP15
Length = 269
Score = 98 (39.6 bits), Expect = 0.00012, P = 0.00012
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDD+ + + LLK+ A ++ +G AL FL +G +
Sbjct: 113 PSLLVVDDTPQNIHHLHGLLKD-AYRIIPQTSGKGALSFL--------------SGELAD 157
Query: 81 LVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLK 140
L++ D MP M GYE+ ++IK + P + LE GA F+ +P+
Sbjct: 158 LILLDIRMPDMDGYEVCRQIKSTASLADIPVIFLTSLDDPMDETKGLEMGACDFITRPIV 217
Query: 141 PSDVK-KLTGHL 151
P+ ++ ++ H+
Sbjct: 218 PAILRARIRSHI 229
>TIGR_CMR|SO_3209 [details] [associations]
symbol:SO_3209 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:GHYDFLV
HSSP:P06143 RefSeq:NP_718764.1 ProteinModelPortal:Q8ECD4 SMR:Q8ECD4
GeneID:1170902 KEGG:son:SO_3209 PATRIC:23526102
ProtClustDB:CLSK907053 Uniprot:Q8ECD4
Length = 127
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+I++NLL++ T A++G AL L Q+ + +
Sbjct: 7 ILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPML-------QKGDFD-------F 52
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LLK I+ +I + G +++KP
Sbjct: 53 VVTDWNMPGMQGIDLLKAIRADDSLKHLPVLMVTAEAKREQIIAAAQAGVNGYVVKPFTA 112
Query: 142 SDVKK 146
+ +K+
Sbjct: 113 ATLKE 117
>TIGR_CMR|SPO_0022 [details] [associations]
symbol:SPO_0022 "response regulator" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008152
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
SUPFAM:SSF81606 RefSeq:YP_165295.1 ProteinModelPortal:Q5LWH9
GeneID:3194721 KEGG:sil:SPO0022 PATRIC:23373275
HOGENOM:HOG000291805 OMA:ERKWGDL ProtClustDB:CLSK933114
Uniprot:Q5LWH9
Length = 445
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS + R+I+ + LK +V AE+G A+E +LV
Sbjct: 43 VLVVDDSRLQRRILSSSLKKWGFEVIEAESGEEAMEICARA--------------MPDLV 88
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
++D+ MPGM+G + + + + + + L+ GA F++KP+
Sbjct: 89 LSDWVMPGMSGVDFCEAFRQLNSDRYCYFILLTSKSEKNEVAQGLDAGADDFLIKPVSSD 148
Query: 143 DVK 145
+++
Sbjct: 149 ELR 151
>TIGR_CMR|CPS_3950 [details] [associations]
symbol:CPS_3950 "response regulator/GGDEF domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 Pfam:PF00563 GO:GO:0006355 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 Gene3D:3.20.20.450
InterPro:IPR001633 SMART:SM00052 SUPFAM:SSF141868 PROSITE:PS50883
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000136246 RefSeq:YP_270608.1 ProteinModelPortal:Q47X62
STRING:Q47X62 GeneID:3523052 KEGG:cps:CPS_3950 PATRIC:21470787
OMA:NITEVES ProtClustDB:CLSK768238
BioCyc:CPSY167879:GI48-3963-MONOMER Uniprot:Q47X62
Length = 566
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 23 VLAVDDSIVDRKIVENLLKNS--ACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
VL VDD IVDR++++ LK S +C +T E+ VD+ + NL + +
Sbjct: 6 VLIVDDDIVDRELIKRTLKRSDISCNITEVES----------VDDALK--NLQDSS--FD 51
Query: 81 LVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLK 137
++ DY +P G ELL +IK C+ GAQ F++K
Sbjct: 52 AILLDYNLPQRNGIELLLEIKGDPNRHDTAVIMMSTSKEDELALNCINAGAQDFLVK 108
>TIGR_CMR|GSU_1038 [details] [associations]
symbol:GSU_1038 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_952091.1 ProteinModelPortal:Q74EC5 GeneID:2688721
KEGG:gsu:GSU1038 PATRIC:22024844 OMA:ECALENA
BioCyc:GSUL243231:GH27-1025-MONOMER Uniprot:Q74EC5
Length = 513
Score = 100 (40.3 bits), Expect = 0.00021, P = 0.00021
Identities = 35/120 (29%), Positives = 49/120 (40%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PP +L VDD V RK++ NL S +V AE+G RA+E L+ +
Sbjct: 20 PPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMF---------RELSPD---- 66
Query: 80 NLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPL 139
LV+ D MP M GY I+ + I + GA F+ KP+
Sbjct: 67 -LVLLDIMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPV 125
>UNIPROTKB|Q8EF67 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
OMA:FDVTEAC RefSeq:NP_717723.1 ProteinModelPortal:Q8EF67
GeneID:1169863 KEGG:son:SO_2120 PATRIC:23523858
ProtClustDB:CLSK906601 Uniprot:Q8EF67
Length = 121
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R++VE LK++ +VT A++G AL+ L Q + + +
Sbjct: 5 ILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALD---LCSSQ-----------RFDFI 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP M G L+K ++ + GA +M+KP P
Sbjct: 51 LTDQNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAVGATGWMVKPFDPQ 110
Query: 143 DVKKLTGHLI 152
+ +T ++
Sbjct: 111 KLLAITAKVL 120
>TIGR_CMR|GSU_0403 [details] [associations]
symbol:GSU_0403 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_951462.1 ProteinModelPortal:Q74G46 GeneID:2685717
KEGG:gsu:GSU0403 PATRIC:22023550 OMA:MEGKSID ProtClustDB:CLSK827806
BioCyc:GSUL243231:GH27-435-MONOMER Uniprot:Q74G46
Length = 120
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 34/131 (25%), Positives = 53/131 (40%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL VDDS RKI+ L+ + G+ E D E N L+ G V+L
Sbjct: 3 NVLIVDDSSTMRKIISRSLRQA---------GLPVDEIFEAGDGIEGLNVLS--GKSVDL 51
Query: 82 VITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G E +K+ + + E + GA + KP P
Sbjct: 52 ILSDINMPNMDGLEFIKQARANGHKAPIVMITTEGGE--DILKEAISSGASDSIKKPFTP 109
Query: 142 SDVKKLTGHLI 152
+ + G L+
Sbjct: 110 DQLNEKLGSLL 120
>TIGR_CMR|SO_2120 [details] [associations]
symbol:SO_2120 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 OMA:FDVTEAC RefSeq:NP_717723.1
ProteinModelPortal:Q8EF67 GeneID:1169863 KEGG:son:SO_2120
PATRIC:23523858 ProtClustDB:CLSK906601 Uniprot:Q8EF67
Length = 121
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R++VE LK++ +VT A++G AL+ L Q + + +
Sbjct: 5 ILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALD---LCSSQ-----------RFDFI 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP M G L+K ++ + GA +M+KP P
Sbjct: 51 LTDQNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAVGATGWMVKPFDPQ 110
Query: 143 DVKKLTGHLI 152
+ +T ++
Sbjct: 111 KLLAITAKVL 120
>UNIPROTKB|Q9KUA1 [details] [associations]
symbol:VC_0622 "Sensory box sensor histidine
kinase/response regulator" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 SMART:SM00091 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P08402 PIR:A82300
RefSeq:NP_230271.1 ProteinModelPortal:Q9KUA1 DNASU:2615410
GeneID:2615410 KEGG:vch:VC0622 PATRIC:20080353 OMA:SLYVSSQ
ProtClustDB:CLSK874044 Uniprot:Q9KUA1
Length = 1177
Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N P +L DD V+ +++++ L+ +V TA++G + LE + ++E
Sbjct: 766 NEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAI----KRE--------- 812
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
K LV+ D MPGM+GY++ +K++ N E GA ++
Sbjct: 813 -KPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLS 871
Query: 137 KPLKPSDVK-KLTGHL 151
KP ++ ++ HL
Sbjct: 872 KPFNKQELAARIVAHL 887
>TIGR_CMR|VC_0622 [details] [associations]
symbol:VC_0622 "sensory box sensor histidine
kinase/response regulator" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885 SMART:SM00091
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P08402 PIR:A82300
RefSeq:NP_230271.1 ProteinModelPortal:Q9KUA1 DNASU:2615410
GeneID:2615410 KEGG:vch:VC0622 PATRIC:20080353 OMA:SLYVSSQ
ProtClustDB:CLSK874044 Uniprot:Q9KUA1
Length = 1177
Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N P +L DD V+ +++++ L+ +V TA++G + LE + ++E
Sbjct: 766 NEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAI----KRE--------- 812
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFML 136
K LV+ D MPGM+GY++ +K++ N E GA ++
Sbjct: 813 -KPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLS 871
Query: 137 KPLKPSDVK-KLTGHL 151
KP ++ ++ HL
Sbjct: 872 KPFNKQELAARIVAHL 887
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P +L VDD I+E +L +VT AL L +E++++ +
Sbjct: 8 PSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL-----RERKDSFD---- 58
Query: 78 KVNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLK 137
LV++D MPGM GY LL+++ T + + GA +++K
Sbjct: 59 ---LVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRT--TTVMTGINHGACDYLIK 113
Query: 138 PLKPSDVKKLTGHLI 152
P++P ++K + H++
Sbjct: 114 PIRPEELKNIWQHVV 128
>TIGR_CMR|CPS_1474 [details] [associations]
symbol:CPS_1474 "chemotaxis protein CheV" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 eggNOG:COG0835
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_268216.1 ProteinModelPortal:Q485P9 STRING:Q485P9
GeneID:3523307 KEGG:cps:CPS_1474 PATRIC:21466155 OMA:AWEELSR
BioCyc:CPSY167879:GI48-1555-MONOMER Uniprot:Q485P9
Length = 309
Score = 96 (38.9 bits), Expect = 0.00026, P = 0.00026
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
V+ DDS V R V L+ + A+NG ALE L L E +N + KV L+
Sbjct: 181 VMIADDSTVARNQVRRALEPLGINMVLAKNGRDALEQL-LAIEATCENCITE---KVALM 236
Query: 83 ITDYCMPGMTGYELLKKIK 101
I+D MP M GY L ++K
Sbjct: 237 ISDIEMPEMDGYTLTAEVK 255
>DICTYBASE|DDB_G0268012 [details] [associations]
symbol:DDB_G0268012 "response regulator receiver
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 dictyBase:DDB_G0268012 GO:GO:0006355 GO:GO:0035556
EMBL:AAFI02000003 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 RefSeq:XP_647491.1
ProteinModelPortal:Q55FP2 EnsemblProtists:DDB0233892 GeneID:8616298
KEGG:ddi:DDB_G0268012 InParanoid:Q55FP2 OMA:DDHLFKP Uniprot:Q55FP2
Length = 382
Score = 97 (39.2 bits), Expect = 0.00029, P = 0.00029
Identities = 33/122 (27%), Positives = 53/122 (43%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K ++L V+D ++R I LK K+T AENG++A+ + +NN K
Sbjct: 6 KCANILVVEDDPLNRIIASKFLKKLGHKITLAENGLQAVNAV--------ENN------K 51
Query: 79 VNLVITDYCMPGMTGYELLKKIKXXXXXXXXXXXXXXXXNIPTRINECLEEGAQMFMLKP 138
++++ D MP M G E K I+ + + EC+E G + KP
Sbjct: 52 YDIILMDVNMPIMGGKEATKIIREMQQSLRIKTPIIGLTTVERQ--ECIEAGMDDHLFKP 109
Query: 139 LK 140
K
Sbjct: 110 CK 111
>UNIPROTKB|Q0BZW4 [details] [associations]
symbol:pleD "Response regulator PleD" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 GO:GO:0004871 SUPFAM:SSF55073 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:CP000158 GenomeReviews:CP000158_GR KO:K02488
HOGENOM:HOG000167204 RefSeq:YP_760979.1 ProteinModelPortal:Q0BZW4
STRING:Q0BZW4 GeneID:4287816 KEGG:hne:HNE_2284 PATRIC:32217411
OMA:APRTINA BioCyc:HNEP228405:GI69-2306-MONOMER Uniprot:Q0BZW4
Length = 455
Score = 94 (38.1 bits), Expect = 0.00079, P = 0.00079
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD +R++++ L+ V AENG +ALE V ++E ++
Sbjct: 5 ILVVDDIEANRRLLQAKLEAQYHTVLMAENGPQALE----VAQRENPE----------II 50
Query: 83 ITDYCMPGMTGYELLKKIKXXXXXXXX-XXXXXXXXNIPTRINECLEEGAQMFMLKPL 139
+ D MPGM GYE+ +++K + R+ L GA+ F+ KP+
Sbjct: 51 LLDVMMPGMDGYEVCQRLKADPTTSYIPVVMVTALSEMEDRVKG-LAAGAEDFLTKPV 107
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 153 128 0.00091 102 3 11 22 0.43 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 73
No. of states in DFA: 521 (55 KB)
Total size of DFA: 115 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.71u 0.09s 12.80t Elapsed: 00:00:01
Total cpu time: 12.72u 0.09s 12.81t Elapsed: 00:00:01
Start: Mon May 20 20:23:28 2013 End: Mon May 20 20:23:29 2013