BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042079
(153 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224144996|ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
gi|222862364|gb|EEE99870.1| type-a response regulator [Populus trichocarpa]
Length = 154
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 128/153 (83%), Gaps = 2/153 (1%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
MD G + + + + PHVLAVDDS+VDRK+VE LLKNS+CKVTTAENG+RALE+L
Sbjct: 1 MDGGGGSRENVMVGGAYTEEPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYL 60
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
GL DE+ + +L N +KVNL+ITDYCMPGMTGYELLKKIKESS++KE+PVV++SSENIP
Sbjct: 61 GLGDEK--RTSLEDNVSKVNLIITDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIP 118
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
TRIN+CLEEGAQMFMLKPLK SDV KL +L+N
Sbjct: 119 TRINKCLEEGAQMFMLKPLKQSDVVKLRCNLMN 151
>gi|255559713|ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223540007|gb|EEF41585.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 155
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/149 (71%), Positives = 123/149 (82%), Gaps = 2/149 (1%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G SS PHVLAVDD+++DRK+VE LLKNS CKVTTAENG+RALE+LGL D
Sbjct: 6 GTCSSMEKVLGDYGDQPHVLAVDDNLIDRKLVEKLLKNSCCKVTTAENGLRALEYLGLGD 65
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
+ +N L +N +KVNL+ITDYCMPGMTGYELLKKIKESS+MKEVPVV+VSSENIPTRIN
Sbjct: 66 DD--RNCLENNVSKVNLIITDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTRIN 123
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
+CLEEGAQMFMLKPLK SDVKKL ++N
Sbjct: 124 KCLEEGAQMFMLKPLKLSDVKKLRCDIMN 152
>gi|370988689|dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
Length = 158
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 121/144 (84%), Gaps = 2/144 (1%)
Query: 10 SSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ 69
S + PHVLAVDD++VDRK+VE LLK S+CKVTTAENG+RALE+LGL +QE
Sbjct: 12 SRGMGETTADEPHVLAVDDNLVDRKLVERLLKKSSCKVTTAENGLRALEYLGLGGDQEHS 71
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
N NG+KVN++ITDYCMPGMTGYELLKKIKESS++K+VPVV++SSENIPTRI++C+EE
Sbjct: 72 TN--GNGSKVNMIITDYCMPGMTGYELLKKIKESSILKDVPVVIMSSENIPTRIDQCMEE 129
Query: 130 GAQMFMLKPLKPSDVKKLTGHLIN 153
GAQMFMLKPLK SDVK+L LIN
Sbjct: 130 GAQMFMLKPLKHSDVKRLRCQLIN 153
>gi|309951240|emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
Length = 154
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 128/153 (83%), Gaps = 2/153 (1%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
MD G + + + + PHVLAVDDS+VDRK+VE LLKNS+CKVTTAENG+RALE+L
Sbjct: 1 MDGGGGSRENVMVGGAYTEEPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYL 60
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
GL DE+ + +L N +KVNL+ITDYCMPGMTGYELLKKIKESS++K++PVV++SSENIP
Sbjct: 61 GLGDEK--RTSLEDNVSKVNLIITDYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIP 118
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
TRIN+CLEEGAQMFMLKPLK SDV KL +L+N
Sbjct: 119 TRINKCLEEGAQMFMLKPLKQSDVVKLRCNLMN 151
>gi|351724591|ref|NP_001236551.1| uncharacterized protein LOC100499827 [Glycine max]
gi|255626955|gb|ACU13822.1| unknown [Glycine max]
Length = 146
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/147 (72%), Positives = 125/147 (85%), Gaps = 3/147 (2%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
ASSSS+ + PHVLAVDD+++DRK+VE LL+NS+CKVTTAENG RALE LGL
Sbjct: 3 ASSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGG 62
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
QNN+N +KVN++ITDYCMPGMTGYELLKKIKESSVMKEVPVV++SSENIPTRIN+C
Sbjct: 63 --QNNMNGR-SKVNMIITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKC 119
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHLIN 153
LEEGAQMF+LKPLK SDV+KLT L+N
Sbjct: 120 LEEGAQMFILKPLKQSDVRKLTCQLMN 146
>gi|225448707|ref|XP_002280746.1| PREDICTED: two-component response regulator ARR17 [Vitis vinifera]
Length = 153
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 125/151 (82%), Gaps = 2/151 (1%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
MDA +S++ PHVLAVDD+++DRK++E LLKN +C+VTTAENG+RALE+L
Sbjct: 1 MDAASSSSANDMMVMDYGDEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYL 60
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
GL D Q Q + ++ +KVNL+ITDYCMPGMTGYELLK++K+SS++KEVPVV++SSENIP
Sbjct: 61 GLGDNQ--QTSHKASVSKVNLIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIP 118
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
TRIN+CLEEGAQMFMLKPLK SDVKKL +L
Sbjct: 119 TRINKCLEEGAQMFMLKPLKQSDVKKLRCYL 149
>gi|359807455|ref|NP_001241393.1| uncharacterized protein LOC100778707 [Glycine max]
gi|255637322|gb|ACU18991.1| unknown [Glycine max]
Length = 146
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/147 (72%), Positives = 122/147 (82%), Gaps = 3/147 (2%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
A SSS+ + PHVLAVDD+++DRK+VE LL+NS+CKVTTAENG RALE LGL
Sbjct: 3 AGSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGG 62
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
QN +N +KVN+VITDYCMPGMTGYELLKKIKESSV KEVPVV++SSENIPTRIN+C
Sbjct: 63 --QNTMNGR-SKVNMVITDYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRINKC 119
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHLIN 153
LEEGAQMF+LKPLK SDVKKLT L+N
Sbjct: 120 LEEGAQMFILKPLKQSDVKKLTCQLMN 146
>gi|297736479|emb|CBI25350.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 118/131 (90%), Gaps = 2/131 (1%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDD+++DRK++E LLKN +C+VTTAENG+RALE+LGL D Q Q + ++ +KVN
Sbjct: 9 PHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQ--QTSHKASVSKVN 66
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDYCMPGMTGYELLK++K+SS++KEVPVV++SSENIPTRIN+CLEEGAQMFMLKPLK
Sbjct: 67 LIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLK 126
Query: 141 PSDVKKLTGHL 151
SDVKKL +L
Sbjct: 127 QSDVKKLRCYL 137
>gi|441415444|dbj|BAM74646.1| type-A response regulator [Torenia fournieri]
Length = 141
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 116/131 (88%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DR IVE LLKNS+CKVTT ENG RALE+LGL D+Q ++ N+ +KVN+
Sbjct: 9 HVLAVDDNLIDRTIVEKLLKNSSCKVTTVENGRRALEYLGLGDDQNISSDDNAAASKVNM 68
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESSVMK+VPVV++SSEN+PTRIN+CLEEGA+MFMLKPLK
Sbjct: 69 IITDYCMPGMTGYELLKKIKESSVMKDVPVVIMSSENVPTRINKCLEEGAEMFMLKPLKH 128
Query: 142 SDVKKLTGHLI 152
SD+KKL L+
Sbjct: 129 SDMKKLKCQLL 139
>gi|18410485|ref|NP_567037.1| two-component response regulator ARR17 [Arabidopsis thaliana]
gi|51316089|sp|Q9FPR6.1|ARR17_ARATH RecName: Full=Two-component response regulator ARR17
gi|11870071|gb|AAG40613.1|AF305722_1 response regulator 17 [Arabidopsis thaliana]
gi|332645994|gb|AEE79515.1| two-component response regulator ARR17 [Arabidopsis thaliana]
Length = 153
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/149 (67%), Positives = 121/149 (81%), Gaps = 2/149 (1%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S S S SS + HVLAVDD+++DRK+VE +LK S+CKVTTAENG+RALE+LGL D
Sbjct: 4 GCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 63
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
Q Q + +N KVNL+ITDYCMPGMTG+ELLKK+KESS +KEVPVV++SSENIPTRIN
Sbjct: 64 PQ--QTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
+CL GAQMFM KPLK SDV+KL HL+N
Sbjct: 122 KCLASGAQMFMQKPLKLSDVEKLKCHLLN 150
>gi|147837871|emb|CAN60564.1| hypothetical protein VITISV_013996 [Vitis vinifera]
Length = 154
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 123/152 (80%), Gaps = 3/152 (1%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
MDA + ++ PHVLAVDD+++DRK++E LLKN +C+VTTAENG+RALE+L
Sbjct: 1 MDAASSSXANDMMVMDYGDEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYL 60
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKE-SSVMKEVPVVVVSSENI 119
GL D Q Q + ++ +KVNL+ITDYCMPGMTGYELLK+ K+ SS++KEVPVV++SSENI
Sbjct: 61 GLGDNQ--QTSHKASVSKVNLIITDYCMPGMTGYELLKRXKQQSSILKEVPVVIMSSENI 118
Query: 120 PTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
PTRIN+CLEEGAQMFMLKPLK SDVKKL +L
Sbjct: 119 PTRINKCLEEGAQMFMLKPLKQSDVKKLRCYL 150
>gi|297816962|ref|XP_002876364.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322202|gb|EFH52623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/149 (66%), Positives = 119/149 (79%), Gaps = 6/149 (4%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S S S SS + HVLAVDD+++DRK +E +LK S+CKVTTAENG+RALE+LGL D
Sbjct: 4 GCGSGSESCLSSMEEELHVLAVDDNLIDRKFLERILKISSCKVTTAENGLRALEYLGLGD 63
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
Q+ +N KVNL+ITDYCMPGMTG+ELLKK+KESS +KEVPVV++SSENIPTRIN
Sbjct: 64 PQQ------TNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 117
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
+CL GAQMFM KPLK SDV+KL HL+N
Sbjct: 118 KCLASGAQMFMQKPLKLSDVEKLKCHLLN 146
>gi|297824003|ref|XP_002879884.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
gi|297325723|gb|EFH56143.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/132 (69%), Positives = 113/132 (85%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DRK+VE LLK S+CKVTTAEN +RALE+LGL D+ + + L N KVNL
Sbjct: 29 HVLAVDDNLIDRKLVERLLKISSCKVTTAENAIRALEYLGLGDQNQHIDALTCNVMKVNL 88
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTG+ELLKK+KESS ++E+PVV++SSENIPTRIN+CL GAQMFM KPLK
Sbjct: 89 IITDYCMPGMTGFELLKKVKESSNLRELPVVIMSSENIPTRINKCLASGAQMFMQKPLKL 148
Query: 142 SDVKKLTGHLIN 153
SDV+KL HL+N
Sbjct: 149 SDVEKLKCHLMN 160
>gi|15226732|ref|NP_181599.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|51316112|sp|Q9SHC2.1|ARR16_ARATH RecName: Full=Two-component response regulator ARR16
gi|11870068|gb|AAG40612.1|AF305721_1 response regulator 16 [Arabidopsis thaliana]
gi|10443140|emb|CAC10396.1| putative type A response regulator [Arabidopsis thaliana]
gi|194708806|gb|ACF88487.1| At2g40670 [Arabidopsis thaliana]
gi|330254768|gb|AEC09862.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 164
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 112/132 (84%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DRK+VE LLK S CKVTTAEN +RALE+LGL D+ + + L N KV+L
Sbjct: 30 HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSL 89
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTG+ELLKK+KESS ++EVPVV++SSENIPTRIN+CL GAQMFM KPLK
Sbjct: 90 IITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKL 149
Query: 142 SDVKKLTGHLIN 153
+DV+KL HL+N
Sbjct: 150 ADVEKLKCHLMN 161
>gi|334184846|ref|NP_001189722.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|330254769|gb|AEC09863.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 165
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DRK+VE LLK S CKVTTAEN +RALE+LGL D+ + + L N KV+L
Sbjct: 30 HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSL 89
Query: 82 VITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITDYCMPGMTG+ELLKK+K ESS ++EVPVV++SSENIPTRIN+CL GAQMFM KPLK
Sbjct: 90 IITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLK 149
Query: 141 PSDVKKLTGHLIN 153
+DV+KL HL+N
Sbjct: 150 LADVEKLKCHLMN 162
>gi|224146583|ref|XP_002326060.1| type-a response regulator [Populus trichocarpa]
gi|222862935|gb|EEF00442.1| type-a response regulator [Populus trichocarpa]
Length = 151
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 106/131 (80%), Gaps = 3/131 (2%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS++DRK++E LL NS C+VTTAENG RALE+LGL D Q + S KVN
Sbjct: 19 PHVLAVDDSLIDRKVIERLLINSTCRVTTAENGKRALEYLGLADGQHPSH---SQDLKVN 75
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MPGMTGYELLK+IKES MKE+PVVVVSSENIPTRIN+C+E GAQ F+LKPL+
Sbjct: 76 MIITDYSMPGMTGYELLKRIKESPTMKEIPVVVVSSENIPTRINQCMEGGAQEFLLKPLQ 135
Query: 141 PSDVKKLTGHL 151
SD KL H+
Sbjct: 136 LSDATKLRCHI 146
>gi|357486271|ref|XP_003613423.1| Two-component response regulator ARR3 [Medicago truncatula]
gi|355514758|gb|AES96381.1| Two-component response regulator ARR3 [Medicago truncatula]
Length = 237
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 117/145 (80%), Gaps = 1/145 (0%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
++S S + + HVLAVDDS+VDRK++E LLK SACKVT ++G+RAL+FLGLVDE+E
Sbjct: 3 TNSVVSIGVDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKE 62
Query: 68 -QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
+++ G KV+LVITDYCMPGMTGYELLKKIKES+ + +PVV++SSENI RI+ C
Sbjct: 63 TSESDAFVPGLKVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRC 122
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHL 151
LEEGA+ F++KP+K SDVK+L G++
Sbjct: 123 LEEGAEDFIVKPVKLSDVKRLKGYM 147
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 110/132 (83%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DRK++E LLK ++CKVT ++GMRALEFLGL + EQ+ ++ +G K++L
Sbjct: 36 HVLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGL--DAEQRTSV-VDGLKIDL 92
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS KE PVV++SSEN+ RI+ CLEEGA+ F+LKP+K
Sbjct: 93 IITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAEDFILKPVKL 152
Query: 142 SDVKKLTGHLIN 153
SDVK+L ++ N
Sbjct: 153 SDVKRLRDYMTN 164
>gi|33330866|gb|AAQ10676.1| type-A response regulator [Catharanthus roseus]
Length = 154
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 115/150 (76%), Gaps = 10/150 (6%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG--LVDEQEQQNN 71
+ + K HVLAVDD+I+DRKIVE LL +S+CKVTTAENG+RALE+LG V + Q
Sbjct: 2 ADDDRKELHVLAVDDNIIDRKIVEKLLISSSCKVTTAENGIRALEYLGNLGVHSESQTPA 61
Query: 72 LNSNGT--------KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI 123
L+ + KVNL+ITDYC P MTGYELLKKIKESS++K++PV+V+SSENIPTRI
Sbjct: 62 LHQDDAIPTAAGDLKVNLIITDYCKPEMTGYELLKKIKESSILKDIPVIVMSSENIPTRI 121
Query: 124 NECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
++CLEEGAQMFMLKPLK SDV +L L+
Sbjct: 122 HKCLEEGAQMFMLKPLKHSDVTRLRCQLMQ 151
>gi|449457395|ref|XP_004146434.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
gi|449526784|ref|XP_004170393.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
Length = 162
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 117/145 (80%), Gaps = 5/145 (3%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
S N PHVLAVDD++VDRK+VE LLKNS+CKVTTAENG+ ALEFLGL+DE Q N
Sbjct: 18 SCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFE 77
Query: 74 SNG-----TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+ +KVN++ITDYCMPGM+GYELLKKIK SS MKEVPVVVVSSEN+PTRIN+CLE
Sbjct: 78 RSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLE 137
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLIN 153
EGA+MFMLKPLK SDV KL +N
Sbjct: 138 EGAEMFMLKPLKQSDVVKLKCQFMN 162
>gi|296086487|emb|CBI32076.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL+FLGL E++N+ +G KV+L
Sbjct: 31 HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGL---DEEKNSAGLDGLKVDL 87
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS +E PVV++SSENI TRI+ CLEEGA+ F++KP+K
Sbjct: 88 IITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKL 147
Query: 142 SDVKKLTGHL 151
SDVK+L ++
Sbjct: 148 SDVKRLKDYM 157
>gi|147768948|emb|CAN69259.1| hypothetical protein VITISV_026384 [Vitis vinifera]
Length = 210
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL+FLGL E++N+ +G KV+L
Sbjct: 20 HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGL---DEEKNSAGLDGLKVDL 76
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS +E PVV++SSENI TRI+ CLEEGA+ F++KP+K
Sbjct: 77 IITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKL 136
Query: 142 SDVKKLTGHL 151
SDVK+L ++
Sbjct: 137 SDVKRLKDYM 146
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 110/137 (80%), Gaps = 6/137 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL------NSN 75
HVLAVDDS++DRK++E LLK S+C+VTT ++G +ALEFLGL + ++ ++N N
Sbjct: 11 HVLAVDDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGLQEHEQNKSNQPCVSLDNHQ 70
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
++NL+ITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RIN CLEEGA+ F
Sbjct: 71 EAEINLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFF 130
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV KL H++
Sbjct: 131 LKPVRLSDVNKLRPHMM 147
>gi|356497802|ref|XP_003517746.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 244
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 118/155 (76%), Gaps = 8/155 (5%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
MD GV S + S + + HVLAVDDS+VDRK++E LLK SACKVT ++G+RAL+FL
Sbjct: 1 MDTDGVVSFNHVSPEDSHEV-HVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFL 59
Query: 61 GLVDEQEQQNNLNSNG----TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS 116
GL EQ+ S+G KV+L+ITDYCMP MTGYELLKKIKES++ +E+PVV++SS
Sbjct: 60 GL---DEQRRTSESDGFVPDLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSS 116
Query: 117 ENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ENI RI+ CLEEGA+ F++KP+K SDVK+L G+L
Sbjct: 117 ENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYL 151
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/131 (62%), Positives = 109/131 (83%), Gaps = 2/131 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DRK++E LLK S+ +VT ++G +ALEFLGL ++E+Q N + T+VNL
Sbjct: 10 HVLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGL--QEEEQRNHHPQETEVNL 67
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGY+LL+KIKESS +K++PVV++SSENIP+RIN CLEEGA+ F LKP++
Sbjct: 68 IITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQL 127
Query: 142 SDVKKLTGHLI 152
SDV KL HL+
Sbjct: 128 SDVNKLRPHLL 138
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 116/155 (74%), Gaps = 8/155 (5%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
MD G+ S S + HVLAVDDS+VDRK++E LLK SACKVT ++G+RAL+FL
Sbjct: 1 MDTDGLVSFDHISPE-DSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFL 59
Query: 61 GLVDEQEQQNNLNSNG----TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS 116
GL EQ+ S+G KV+L+ITDYCMP MTGYELLKKIKESS+ +E+PVV++SS
Sbjct: 60 GL---DEQRRTSESDGFVPSLKVDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSS 116
Query: 117 ENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ENI RI+ CLEEGA+ F++KP+K SDVK+L G++
Sbjct: 117 ENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYM 151
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 109/131 (83%), Gaps = 2/131 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ +AC+VT ++G+RAL++LGL DE Q + +G KV++
Sbjct: 30 HVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQ--VGFDGLKVDM 87
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS ++E+PVV++SSEN+ RI+ CLEEGA+ F++KP+K
Sbjct: 88 IITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKL 147
Query: 142 SDVKKLTGHLI 152
SDVK+L +++
Sbjct: 148 SDVKRLREYMV 158
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 105/141 (74%), Gaps = 8/141 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ--------NN 71
P HVLAVDDS +DRK++E LLK S+ VT ++G +ALEFLGLV +QQ N
Sbjct: 9 PFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQN 68
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ VNL+ITDY MPGM+GYELL+KIKES +K++PVV++SSEN+P+RIN CLEEGA
Sbjct: 69 HHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGA 128
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
+ F LKP++ SDV+KL HLI
Sbjct: 129 EEFFLKPVQLSDVRKLRPHLI 149
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 110/132 (83%), Gaps = 2/132 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL++LGL + E+ +++ +G KVNL
Sbjct: 21 HVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL--DGEENSSIGFDGVKVNL 78
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPGMTGYELLKKIKESS +E+PVVV+SSENI TRI+ CLEEGA+ F+LKP+K
Sbjct: 79 IMTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLEEGAEDFLLKPVKL 138
Query: 142 SDVKKLTGHLIN 153
SDV++L +++
Sbjct: 139 SDVRRLRDFIMS 150
>gi|356501005|ref|XP_003519320.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 240
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 109/134 (81%), Gaps = 7/134 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG----T 77
HVLAVDDS+VDRK++E LLK SACKVT ++G+RAL+FLGL EQ+ S+G
Sbjct: 21 HVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL---DEQRRTSESDGFVPDL 77
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
KV+L+ITDYCMP MTGYELLKKIKES++ +E+PVV++SSENI RI+ CLEEGA+ F++K
Sbjct: 78 KVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFIVK 137
Query: 138 PLKPSDVKKLTGHL 151
P+K SDVK+L G++
Sbjct: 138 PVKLSDVKRLKGYM 151
>gi|148608690|gb|ABQ95669.1| response regulator, partial [Malus x domestica]
Length = 209
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 107/130 (82%), Gaps = 2/130 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+C+VTT ++G RAL+FLGL ++E+ + +G KV+L
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGL--DEEKSSTAGFDGLKVDL 58
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS K PVV++SSEN+ RI+ CLEEGA+ F++KP+K
Sbjct: 59 IITDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKL 118
Query: 142 SDVKKLTGHL 151
+DVK+L ++
Sbjct: 119 ADVKRLKDYM 128
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 108/134 (80%), Gaps = 3/134 (2%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
SS + K HVLAVDDS+VDRK++E LLK S CKVT E+G RAL++LGL E+ + +
Sbjct: 7 SSGSAKELHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEK---STVG 63
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+G KVNL++TDY MPGMTGYELLKKIK SS +KE+PVV++SSENI TRI+ CLEEGA+
Sbjct: 64 FDGLKVNLILTDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEE 123
Query: 134 FMLKPLKPSDVKKL 147
F++KP+K SDVK++
Sbjct: 124 FLVKPVKLSDVKRI 137
>gi|148608687|gb|ABQ95668.1| response regulator, partial [Malus x domestica]
Length = 212
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 107/130 (82%), Gaps = 2/130 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+C+VTT ++G RAL+FLGL ++E+ + +G KV+L
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGL--DEEKSSTAGFDGLKVDL 58
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS K PVV++SSEN+ RI+ CLEEGA+ F++KP+K
Sbjct: 59 IITDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKL 118
Query: 142 SDVKKLTGHL 151
+DVK+L ++
Sbjct: 119 ADVKRLKDYM 128
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL +E+ + KV+L
Sbjct: 35 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAE---FDRLKVDL 91
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS +EVPVV++SSEN+ TRI+ CLEEGAQ F+LKP+K
Sbjct: 92 IITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKL 151
Query: 142 SDVKKLTGHL 151
+DVK+L HL
Sbjct: 152 ADVKRLRSHL 161
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL +E+ + KV+L
Sbjct: 32 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAE---FDRLKVDL 88
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS +EVPVV++SSEN+ TRI+ CLEEGAQ F+LKP+K
Sbjct: 89 IITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKL 148
Query: 142 SDVKKLTGHL 151
+DVK+L HL
Sbjct: 149 ADVKRLRNHL 158
>gi|309951226|emb|CBX43983.1| putative A-type response regulator 1b [Populus x canadensis]
Length = 257
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 119/151 (78%), Gaps = 4/151 (2%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S +S+S + + HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL+ LGL+D
Sbjct: 18 GFDLSPNSNSDNEEEGVHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLD 77
Query: 65 EQEQQNNLNSNG----TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+++ ++ +S+ KV+L+ITDYCMPGMTGYELLKKIKES+ +E+PVV++SSEN+
Sbjct: 78 EEDKSSSSSSSAGFDVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVV 137
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
RI+ CLEEGA+ F++KP+K SDVK++ ++
Sbjct: 138 ARIDRCLEEGAEDFIVKPVKLSDVKRIRDYM 168
>gi|15218957|ref|NP_176202.1| two-component response regulator ARR3 [Arabidopsis thaliana]
gi|51316126|sp|Q9ZWS9.1|ARR3_ARATH RecName: Full=Two-component response regulator ARR3
gi|5080824|gb|AAD39333.1|AC007258_22 response regulator 3 [Arabidopsis thaliana]
gi|3953595|dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
gi|89111918|gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
gi|110737841|dbj|BAF00859.1| hypothetical protein [Arabidopsis thaliana]
gi|332195521|gb|AEE33642.1| two-component response regulator ARR3 [Arabidopsis thaliana]
Length = 231
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 106/130 (81%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL D++ + + KV+L
Sbjct: 34 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAA---VEFDRLKVDL 90
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKES+ KEVPVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 91 IITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKL 150
Query: 142 SDVKKLTGHL 151
+DVK+L +L
Sbjct: 151 ADVKRLRSYL 160
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 110/138 (79%), Gaps = 4/138 (2%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
SS + HVLAVDDS+VDRK++E LLK ++CKVT ++G RAL+FLGL +++ + +
Sbjct: 22 SSCDNDEVHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGL----DEEKSTS 77
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
G KV+L+ITDYCMPGMTGYELLKKIKESS +E+PVV++SSEN+ RI+ CLEEGA+
Sbjct: 78 IQGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAED 137
Query: 134 FMLKPLKPSDVKKLTGHL 151
F++KP+K SDVK++ ++
Sbjct: 138 FLVKPVKLSDVKRIRDYM 155
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DRK++E LLK S+ +VT ++G +ALEFLGL ++E+Q N + +VNL
Sbjct: 10 HVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGL--QEEEQRNHHPQEMEVNL 67
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGY+LL+KIKESS +K++PVV++SSENIP+RIN CLEEGA+ F LKP++
Sbjct: 68 IITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQL 127
Query: 142 SDVKKLTGHLIN 153
SDV KL HL+
Sbjct: 128 SDVSKLRPHLLR 139
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 106/136 (77%), Gaps = 6/136 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL------NSN 75
HVLAVDDSI+DRK++E LLK S+ +VTT ++G +ALEFLGL + +E N N
Sbjct: 11 HVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNNHQ 70
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNLVITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RIN CLEEGA+ F
Sbjct: 71 EVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFF 130
Query: 136 LKPLKPSDVKKLTGHL 151
LKP++ SD+ +L H+
Sbjct: 131 LKPVRQSDLVRLKSHI 146
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 106/127 (83%), Gaps = 1/127 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT-KVN 80
HVLAVDDS+VDRK++E LLK SA +VT ++G++ALEFLGL+DE+++ + N +VN
Sbjct: 11 HVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISGSNHQQVVEVN 70
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDY MPGMTGY+LL+K+KESS +K++PVV++SSENIP+RIN CLEEGA F LKP+K
Sbjct: 71 LIITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRINRCLEEGADDFFLKPVK 130
Query: 141 PSDVKKL 147
SDV KL
Sbjct: 131 QSDVNKL 137
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 110/137 (80%), Gaps = 8/137 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN------SN 75
HVLAVDDSI+DRK++E LLK S+ +VT ++G +ALEFLGL ++ +Q NL+ S
Sbjct: 10 HVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGL--QEAEQRNLSPPSLCPSQ 67
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNL+ITDYCMPGMTGY+LL+KIKES+ +K++PVV++SSENIP+RIN CLEEGA+ F
Sbjct: 68 EMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFF 127
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV KL HL+
Sbjct: 128 LKPVQLSDVNKLRPHLL 144
>gi|351725781|ref|NP_001238384.1| uncharacterized protein LOC100306152 [Glycine max]
gi|255627697|gb|ACU14193.1| unknown [Glycine max]
Length = 201
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/132 (64%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LLK S+CKVT E+G RAL++LGL E+ +++ + KVNL
Sbjct: 22 HVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEK---SSIGLDSVKVNL 78
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPGMTGYELLKKIKESSV +EVPVVV+SSENI TRI+ CLEEGA+ F+LKP+K
Sbjct: 79 IMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKL 138
Query: 142 SDVKKLTGHLIN 153
SDVK++T ++
Sbjct: 139 SDVKRVTDFIMR 150
>gi|309951224|emb|CBX43982.1| putative A-type response regulator 1a [Populus x canadensis]
Length = 255
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 120/153 (78%), Gaps = 6/153 (3%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S +S+S + + HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL+ LGL+D
Sbjct: 18 GFDLSPNSNSDNEEEGVHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLD 77
Query: 65 EQEQQNNLNSNGT------KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSEN 118
E+++ ++ +S+ + KV+L+ITDYCMPGMTGYELLKKIKES+ +E+PVV++SSEN
Sbjct: 78 EEDKSSSSSSSSSAGFDVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSEN 137
Query: 119 IPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
+ RI+ CLEEGA+ F++KP+K SDVK++ ++
Sbjct: 138 VVARIDRCLEEGAEDFIVKPVKLSDVKRIRDYM 170
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 107/132 (81%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+CKVT E+G RAL++LGL + + +L + KVNL
Sbjct: 27 HVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGL---EGENGSLGFDSVKVNL 83
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPGMTGYELLKKIKESSV +E+PVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 84 IMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKL 143
Query: 142 SDVKKLTGHLIN 153
SDV++L ++
Sbjct: 144 SDVRRLKDFIMK 155
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 105/136 (77%), Gaps = 6/136 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL------NSN 75
HVLAVDDSI+DRK++E LLK S+ +VTT ++G +ALEFLGL + E N N
Sbjct: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQ 69
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNLVITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RIN CLEEGA+ F
Sbjct: 70 EVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFF 129
Query: 136 LKPLKPSDVKKLTGHL 151
LKP++ SD+ +L H+
Sbjct: 130 LKPVRLSDLNRLKPHM 145
>gi|224102663|ref|XP_002312769.1| type-a response regulator [Populus trichocarpa]
gi|222852589|gb|EEE90136.1| type-a response regulator [Populus trichocarpa]
Length = 258
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 120/153 (78%), Gaps = 6/153 (3%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S +S+S + + HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL+ LGL+D
Sbjct: 18 GFDPSPNSNSDNEEEGVHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLD 77
Query: 65 EQEQQNNLNSNGT------KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSEN 118
E+++ ++ +S+ + KV+L+ITDYCMPGMTGYELLKKIKES+ +E+PVV++SSEN
Sbjct: 78 EEDKSSSSSSSSSAGFDVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSEN 137
Query: 119 IPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
+ RI+ CLEEGA+ F++KP+K SDVK++ ++
Sbjct: 138 VVARIDRCLEEGAEDFIVKPVKLSDVKRIRDYM 170
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 105/136 (77%), Gaps = 6/136 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL------NSN 75
HVLAVDDSI+DRK++E LLK S+ +VTT ++G +ALEFLGL + +E N N
Sbjct: 11 HVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNNHQ 70
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNLVITDYCMPGMTGY+LLKKIKESS ++ +PVV +SSEN+P+RIN CLEEGA+ F
Sbjct: 71 EVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVTMSSENVPSRINRCLEEGAEEFF 130
Query: 136 LKPLKPSDVKKLTGHL 151
LKP++ SD+ +L H+
Sbjct: 131 LKPVRQSDLVRLKSHI 146
>gi|370988685|dbj|BAL43556.1| type-A response regulator [Petunia x hybrida]
Length = 258
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 110/132 (83%), Gaps = 4/132 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LLK ++CKVTT ++GMRAL+FLGL E+++++ +G KV+L
Sbjct: 26 HVLAVDDSLVDRIVIERLLKITSCKVTTVDSGMRALQFLGL---DEEESSVRIDGLKVDL 82
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGY+LLKKIK SS +E+PVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 83 IITDYCMPGMTGYDLLKKIKGSS-FREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKL 141
Query: 142 SDVKKLTGHLIN 153
+DVK+L + +
Sbjct: 142 ADVKRLKSFMFS 153
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 110/137 (80%), Gaps = 8/137 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN------SN 75
HVLAVDDSI+DRK++E LLK S+ +VT ++G +ALEFLGL ++ +Q NL+ S
Sbjct: 10 HVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGL--QEAEQRNLSPPSLCPSQ 67
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNL+ITDYCMPGMTGY+LL+KIKES+ +K++PVV++SSENIP+RIN CLEEGA+ F
Sbjct: 68 EMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFF 127
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV KL HL+
Sbjct: 128 LKPVQLSDVNKLRPHLL 144
>gi|255540813|ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 221
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
SS+ + HVLAVDDS+VDRK++E LLK S+CKVT ++G RAL++LGL E+ +++
Sbjct: 20 SSNGSEELHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGLDGEK---SSVG 76
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
N KVNL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI TRI+ CLEEGA+
Sbjct: 77 FNDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEE 136
Query: 134 FMLKPLKPSDVKKLTGHLIN 153
F++KP+K SDVK+L ++
Sbjct: 137 FIVKPVKLSDVKRLKNFVMR 156
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +ALEFLGL D ++ + S+ +V
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEV 67
Query: 80 --NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
NL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SS+NIP+RIN CLEEGA F LK
Sbjct: 68 AVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLK 127
Query: 138 PLKPSDVKKLTGHLIN 153
P++ SD+ KL H++
Sbjct: 128 PVRLSDMSKLKPHILK 143
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +ALEFLGL D ++ + S+ +V
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEV 67
Query: 80 --NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
NL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SS+NIP+RIN CLEEGA F LK
Sbjct: 68 AVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLK 127
Query: 138 PLKPSDVKKLTGHLI 152
P++ SD+ KL H++
Sbjct: 128 PVRLSDMSKLKPHIL 142
>gi|356516718|ref|XP_003527040.1| PREDICTED: two-component response regulator ARR6-like [Glycine max]
Length = 204
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 107/132 (81%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LLK S+CKVT E+G RAL++LGL E+ +++ + VNL
Sbjct: 22 HVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEK---SSIGFDSVDVNL 78
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPGMTGYELLKKIKESSV +EVPVVV+SSENI TRI+ CLEEGA+ F+LKP+K
Sbjct: 79 IMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKL 138
Query: 142 SDVKKLTGHLIN 153
SDVK++T ++
Sbjct: 139 SDVKRVTDFIMR 150
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +ALEFLGL D ++ + S+ +V
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEV 67
Query: 80 --NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
NL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SS+NIP+RIN CLEEGA F LK
Sbjct: 68 GVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLK 127
Query: 138 PLKPSDVKKLTGHLIN 153
P++ SD+ KL H++
Sbjct: 128 PVRLSDMSKLKPHILK 143
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 108/137 (78%), Gaps = 4/137 (2%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG--- 76
P HVLAVDDS++DRK++E LLK S+ +VTT ++G +AL+FLGL E ++++++
Sbjct: 53 PFHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSVHADQLDV 112
Query: 77 -TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LLKKIKESS +++PVV++SSENIP+RIN CLEEGA F
Sbjct: 113 EVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLEEGANEFF 172
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SD+ KL H++
Sbjct: 173 LKPVRLSDMSKLKPHIM 189
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 106/130 (81%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DR ++E LL+ ++CKVT ++G RALEFLGL D ++ + + KV+L
Sbjct: 34 HVLAVDDSLLDRIVIERLLRITSCKVTAVDSGWRALEFLGLDD---KKAAVEFDRLKVDL 90
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKES+ KEVPVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 91 IITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVITRIDRCLEEGAEDFLLKPVKL 150
Query: 142 SDVKKLTGHL 151
+DVK+L +L
Sbjct: 151 ADVKRLRNYL 160
>gi|224135725|ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa]
gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa]
Length = 192
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 107/137 (78%), Gaps = 3/137 (2%)
Query: 11 SSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN 70
S S S + HVLAVDDS VDRK++E LLK S+CKVT E+G RAL++LGL E+ +
Sbjct: 19 SKGSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEK---S 75
Query: 71 NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
++ N K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLEEG
Sbjct: 76 SVGFNDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEG 135
Query: 131 AQMFMLKPLKPSDVKKL 147
A+ ++LKP+K SDVK++
Sbjct: 136 AEEYILKPVKLSDVKRI 152
>gi|3953599|dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S+ +SS ++PK HVLAVDDS+VDRK +E LL+ S+CKVT ++ RAL++LGL + E
Sbjct: 13 SNDTSSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGEN 70
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+++ K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLE
Sbjct: 71 NSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLE 130
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
EGA+ F+LKP+K +DVK+L L+
Sbjct: 131 EGAEDFLLKPVKLADVKRLRDSLM 154
>gi|15228338|ref|NP_190393.1| two-component response regulator ARR5 [Arabidopsis thaliana]
gi|51316111|sp|Q9SB04.2|ARR5_ARATH RecName: Full=Two-component response regulator ARR5; AltName:
Full=Response reactor 2
gi|3273198|dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
gi|4678318|emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gi|18252911|gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|21389637|gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|110741132|dbj|BAE98659.1| response reactor 2 [Arabidopsis thaliana]
gi|332644847|gb|AEE78368.1| two-component response regulator ARR5 [Arabidopsis thaliana]
Length = 184
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S+ +SS ++PK HVLAVDDS+VDRK +E LL+ S+CKVT ++ RAL++LGL + E
Sbjct: 13 SNDTSSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGEN 70
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+++ K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLE
Sbjct: 71 NSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLE 130
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
EGA+ F+LKP+K +DVK+L L+
Sbjct: 131 EGAEDFLLKPVKLADVKRLRDSLM 154
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 105/138 (76%), Gaps = 8/138 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ--------NNLN 73
HVLAVDDSI+DRK++E LL+ S+ +VTT ++G +ALEFLGL + E NN
Sbjct: 11 HVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPSIPSVCPNNHQ 70
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+VNLVITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RIN CLEEGA+
Sbjct: 71 PQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEE 130
Query: 134 FMLKPLKPSDVKKLTGHL 151
F LKP++ SD+ KL H+
Sbjct: 131 FFLKPVRLSDLNKLKPHM 148
>gi|3323581|gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S+ +SS ++PK HVLAVDDS+VDRK +E LL+ S+CKVT ++ RAL++LGL + E
Sbjct: 13 SNDTSSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGEN 70
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+++ K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLE
Sbjct: 71 NSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLE 130
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
EGA+ F+LKP+K +DVK+L L+
Sbjct: 131 EGAEDFLLKPVKLADVKRLRDSLM 154
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 106/132 (80%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK++E LLK S+CKVT E+ RAL+FLGL E +++ + KVNL
Sbjct: 27 HVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGEN---SDVAFDAVKVNL 83
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPGMTGYELLKKIKESSV +E+PVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 84 IMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKL 143
Query: 142 SDVKKLTGHLIN 153
SDV++L ++
Sbjct: 144 SDVRRLKDFIMR 155
>gi|224102495|ref|XP_002312699.1| type-a response regulator [Populus trichocarpa]
gi|222852519|gb|EEE90066.1| type-a response regulator [Populus trichocarpa]
Length = 247
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 114/153 (74%), Gaps = 9/153 (5%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S +S+S + + HVLAVDDS VDRK++E LLK S+CKVT ++G AL+ LGL+D++E+
Sbjct: 22 SPNSNSDNEEEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDEEE 81
Query: 69 QNNLNS---------NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
+ +S G KV+L+ITDYCMPGMTGYELLKKIKESS +E+PVV++SSEN+
Sbjct: 82 DKSSSSSSSSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENV 141
Query: 120 PTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
RI+ CLEEGA+ F+ KP+K SDVK+L + +
Sbjct: 142 MARIDRCLEEGAEEFIAKPVKLSDVKRLRDYYM 174
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 107/136 (78%), Gaps = 5/136 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL-----NSNG 76
HVLAVDDS++DRK++E LLK S+ +VTT ++G +ALEFLG ++ +N N
Sbjct: 11 HVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGWSKDESGNSNAFDSPKNHQV 70
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
+VNLVITDYCMPGMTGYELLKK+KES+ ++++PVV++SSEN+P+RIN CLEEGA+ F L
Sbjct: 71 VEVNLVITDYCMPGMTGYELLKKVKESTFLRDIPVVIMSSENVPSRINRCLEEGAEEFFL 130
Query: 137 KPLKPSDVKKLTGHLI 152
KP++ SDV KL H++
Sbjct: 131 KPVRLSDVNKLRPHMM 146
>gi|297733851|emb|CBI15098.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 114/152 (75%), Gaps = 8/152 (5%)
Query: 2 DACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
+ GV+ S++ S HVLAVDDS VDRK++E LLK S+CKVT E+G RAL+FLG
Sbjct: 89 EKVGVSDHSAAGSEL-----HVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLG 143
Query: 62 LVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPT 121
L E+ N++ +G KVNL++TDY MPGMTGYELLKKIKES +++PVV++SSENI T
Sbjct: 144 LDGEE---NSVGFDGLKVNLIMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILT 200
Query: 122 RINECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
RI+ CLEEGA+ F++KP+K +DV++L ++
Sbjct: 201 RIDRCLEEGAEEFIVKPVKLADVRRLRDFIMR 232
>gi|224075846|ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
gi|224075848|ref|XP_002304795.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
gi|222842226|gb|EEE79773.1| type-a response regulator [Populus trichocarpa]
gi|222842227|gb|EEE79774.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
Length = 193
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 107/139 (76%), Gaps = 8/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN--------NLN 73
HVLAVDDS++DRK++E LLK S+ +VT ++G +ALEFLGL + EQ++ + +
Sbjct: 14 HVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSSVSPDHH 73
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
++N++ITDYCMPGMTGY+LLKKIKES K++PVV++SSEN+P+RIN CLEEGA+
Sbjct: 74 HQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEEGAEE 133
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F LKP++ SDV KL HL+
Sbjct: 134 FFLKPVQLSDVNKLRPHLM 152
>gi|224135721|ref|XP_002322144.1| type-a response regulator [Populus trichocarpa]
gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa]
gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis]
Length = 223
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 107/137 (78%), Gaps = 3/137 (2%)
Query: 11 SSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN 70
S S S + HVLAVDDS VDRK++E LLK S+CKVT E+G RAL++LGL E+ +
Sbjct: 19 SKGSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEK---S 75
Query: 71 NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
++ N K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLEEG
Sbjct: 76 SVGFNDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEG 135
Query: 131 AQMFMLKPLKPSDVKKL 147
A+ ++LKP+K SDVK++
Sbjct: 136 AEEYILKPVKLSDVKRI 152
>gi|309951232|emb|CBX43986.1| putative A-type response regulator 4 [Populus x canadensis]
Length = 193
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 107/139 (76%), Gaps = 8/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN--------NLN 73
HVLAVDDS++DRK++E LLK S+ +VT ++G +ALEFLGL + EQ++ + +
Sbjct: 14 HVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPSSVSPDHH 73
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
++N++ITDYCMPGMTGY+LLKKIKES K++PVV++SSEN+P+RIN CLEEGA+
Sbjct: 74 HQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEEGAEE 133
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F LKP++ SDV KL HL+
Sbjct: 134 FFLKPVQLSDVNKLRPHLM 152
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK- 78
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +ALEFLGL ++ ++ ++ +
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHGHEDSPISVQADQQEA 67
Query: 79 -VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEGA F LK
Sbjct: 68 AVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSENIPSRINRCLEEGADEFFLK 127
Query: 138 PLKPSDVKKLTGHLI 152
P++ SD+ KL H++
Sbjct: 128 PVRLSDMSKLKPHIL 142
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 113/149 (75%), Gaps = 8/149 (5%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
GV+ S++ S HVLAVDDS VDRK++E LLK S+CKVT E+G RAL+FLGL
Sbjct: 18 GVSDHSAAGSEL-----HVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDG 72
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
E+ N++ +G KVNL++TDY MPGMTGYELLKKIKES +++PVV++SSENI TRI+
Sbjct: 73 EE---NSVGFDGLKVNLIMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRID 129
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
CLEEGA+ F++KP+K +DV++L ++
Sbjct: 130 RCLEEGAEEFIVKPVKLADVRRLRDFIMR 158
>gi|224033189|gb|ACN35670.1| unknown [Zea mays]
gi|413915889|gb|AFW55821.1| response regulator 6 [Zea mays]
Length = 262
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 108/141 (76%), Gaps = 8/141 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE-------QEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +AL+FLGL D+ Q ++
Sbjct: 68 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 127
Query: 73 NSN-GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+N VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEGA
Sbjct: 128 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 187
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
F LKP++ SD+ KL H++
Sbjct: 188 DEFFLKPVRLSDMNKLKPHIL 208
>gi|194694438|gb|ACF81303.1| unknown [Zea mays]
Length = 235
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 108/141 (76%), Gaps = 8/141 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE-------QEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +AL+FLGL D+ Q ++
Sbjct: 41 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 100
Query: 73 NSN-GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+N VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEGA
Sbjct: 101 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 160
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
F LKP++ SD+ KL H++
Sbjct: 161 DEFFLKPVRLSDMNKLKPHIL 181
>gi|162459272|ref|NP_001104857.1| LOC541632 [Zea mays]
gi|12060388|dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 108/141 (76%), Gaps = 8/141 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE-------QEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +AL+FLGL D+ Q ++
Sbjct: 41 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 100
Query: 73 NSN-GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+N VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEGA
Sbjct: 101 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 160
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
F LKP++ SD+ KL H++
Sbjct: 161 DEFFLKPVRLSDMNKLKPHIL 181
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 110/132 (83%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DRK++E LLK S+ +VTT ++ +AL+FLGL D+++ +LN + +VN+
Sbjct: 16 HVLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDED---DLNVDNIQVNM 72
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGY+LL+++KESS +K++PVV++SSEN+ +R + C+ EGAQ F+LKP++
Sbjct: 73 IITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLLKPVQL 132
Query: 142 SDVKKLTGHLIN 153
SDVKKL H++N
Sbjct: 133 SDVKKLRSHILN 144
>gi|15242000|ref|NP_201097.1| two-component response regulator ARR6 [Arabidopsis thaliana]
gi|51316124|sp|Q9ZWS6.2|ARR6_ARATH RecName: Full=Two-component response regulator ARR6
gi|3953601|dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
gi|10177470|dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
gi|28466913|gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
gi|110735683|dbj|BAE99822.1| response regulator 6 [Arabidopsis thaliana]
gi|332010291|gb|AED97674.1| two-component response regulator ARR6 [Arabidopsis thaliana]
Length = 186
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 106/142 (74%), Gaps = 3/142 (2%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
SS +P P HVLAVDDS VDRK +E LL+ S+CKVT ++ RAL++LGL ++ +
Sbjct: 16 SSKFGSPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DVEEKS 72
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ KVNL++TDY MPGMTGYELLKKIKESS +EVPVV++SSENI RI+ CLEEGA
Sbjct: 73 VGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGA 132
Query: 132 QMFMLKPLKPSDVKKLTGHLIN 153
+ F+LKP+K SDVK+L L+
Sbjct: 133 EDFLLKPVKLSDVKRLRDSLMK 154
>gi|388492124|gb|AFK34128.1| unknown [Lotus japonicus]
gi|388498306|gb|AFK37219.1| unknown [Lotus japonicus]
Length = 207
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 108/133 (81%), Gaps = 4/133 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LL+ S+CKVT ++G RAL++LGL E+ +++ + KVNL
Sbjct: 21 HVLAVDDSHVDRKVIERLLRISSCKVTVVDSGTRALQYLGLDGEK---SSIGLDSVKVNL 77
Query: 82 VITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++TDY MPGMTGYELLKKIK ESSV +E+PVVV+SSENI TRI+ CLEEGA+ F+LKP+K
Sbjct: 78 IMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVK 137
Query: 141 PSDVKKLTGHLIN 153
SDVK+LT ++
Sbjct: 138 LSDVKRLTDFIMR 150
>gi|195622036|gb|ACG32848.1| RR10 - Corn type-A response regulator [Zea mays]
Length = 204
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 108/141 (76%), Gaps = 8/141 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE-------QEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +AL+FLGL D+ Q ++
Sbjct: 9 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDV 68
Query: 73 NSN-GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+N VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEGA
Sbjct: 69 AANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGA 128
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
F LKP++ SD+ KL H++
Sbjct: 129 DEFFLKPVRLSDMNKLKPHIL 149
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ-- 69
+ S S HVLAVDDS+VDRK++E LLK S+CKVT E+G RAL++LGL E
Sbjct: 17 AESPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGC 76
Query: 70 --NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+ L KVNL++TDY MPGMTGYELLKKIKESSV +E+PVV++SSEN+ TRI+ CL
Sbjct: 77 LFDWLWLQSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCL 136
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
EEGA+ F+LKP+K SDV++L ++
Sbjct: 137 EEGAEDFLLKPVKLSDVRRLKDFIMK 162
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 106/137 (77%), Gaps = 7/137 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE----QQNNLNSN 75
P HVLAVDDS+ DRK++E LLK S+ +VTT ++G +AL+FLGL D+ + L+
Sbjct: 44 PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQLD-- 101
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEGA F
Sbjct: 102 -VAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 160
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SD+ KL H++
Sbjct: 161 LKPVRLSDMNKLKPHIL 177
>gi|297819426|ref|XP_002877596.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
gi|297323434|gb|EFH53855.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 111/144 (77%), Gaps = 3/144 (2%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S+ +SS S+P+ HVLAVDDS+VDRK +E LL+ S+CKVT ++ RAL++LGL E
Sbjct: 13 SNDTSSLSSPELLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGEN-- 70
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+++ K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLE
Sbjct: 71 -SSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLE 129
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
EGA+ F+LKP+K +DVK+L L+
Sbjct: 130 EGAEDFLLKPVKLADVKRLRDSLM 153
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 107/134 (79%), Gaps = 3/134 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG---TK 78
HVLAVDDS++DRK++E LLKNS+ +VTT ++G +ALEFLGL + +++ N +
Sbjct: 10 HVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQEVE 69
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VNL+ITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RI CLEEGA+ F LKP
Sbjct: 70 VNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKP 129
Query: 139 LKPSDVKKLTGHLI 152
++ SDV +L H++
Sbjct: 130 VQISDVNRLKPHMM 143
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 105/136 (77%), Gaps = 6/136 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL------NSN 75
HVLAVDDS++DRK++E LL+ S+ +VTT ++G +ALEFLGL + E + N
Sbjct: 8 HVLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPYVCPNNHQ 67
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNLVITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RIN CLEEGA+ F
Sbjct: 68 EVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFF 127
Query: 136 LKPLKPSDVKKLTGHL 151
LKP++ SD+ KL H+
Sbjct: 128 LKPVRLSDLNKLKPHM 143
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 107/141 (75%), Gaps = 14/141 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT---- 77
HVLAVDDS++DRK++E LLKNS+ +VTT ++G +ALEFLG ++ NS GT
Sbjct: 11 HVLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGWHRDERS----NSKGTSVSP 66
Query: 78 ------KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+VNLVITDYCMPGMTGY+LLKK+KESS +K +PVV+VSSEN+P+RI CLEEGA
Sbjct: 67 KTHQEVEVNLVITDYCMPGMTGYDLLKKMKESSSLKNIPVVIVSSENVPSRITRCLEEGA 126
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
+ F LKP+K +DV KL +++
Sbjct: 127 EEFFLKPMKLTDVNKLWPYML 147
>gi|297739924|emb|CBI30106.3| unnamed protein product [Vitis vinifera]
Length = 157
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 107/134 (79%), Gaps = 3/134 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG---TK 78
HVLAVDDS++DRK++E LLKNS+ +VTT ++G +ALEFLGL + +++ N +
Sbjct: 10 HVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQEVE 69
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VNL+ITDYCMPGMTGY+LLKKIKESS ++ +PVV++SSEN+P+RI CLEEGA+ F LKP
Sbjct: 70 VNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKP 129
Query: 139 LKPSDVKKLTGHLI 152
++ SDV +L H++
Sbjct: 130 VQISDVNRLKPHMM 143
>gi|346703759|emb|CBX24427.1| hypothetical_protein [Oryza glaberrima]
Length = 207
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 107/142 (75%), Gaps = 8/142 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSA-------CKVTTAENGMRALEFLGLVDEQEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ C VTT ++G +ALEFLGL D ++ +
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPISA 67
Query: 73 NSNG-TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
S+ VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SS+NIP+RIN CLEEGA
Sbjct: 68 QSDQQVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGA 127
Query: 132 QMFMLKPLKPSDVKKLTGHLIN 153
F LKP++ SD+ KL H++
Sbjct: 128 DEFFLKPVRLSDMSKLKPHILK 149
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 109/146 (74%), Gaps = 17/146 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK---------------VTTAENGMRALEFLGLVDEQ 66
HVLAVDDS++DRK++E LLK S+ + VT ++G +ALEFLGL ++
Sbjct: 10 HVLAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGL--QE 67
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
E+Q N + T+VNL+ITDY MPGMTGY+LL+KIKESS +K++PVV++SSENIP+RIN C
Sbjct: 68 EEQRNHHPQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRC 127
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHLI 152
LEEGA+ F LKP++ SDV KL HL+
Sbjct: 128 LEEGAEDFFLKPVQLSDVNKLRPHLL 153
>gi|108863990|gb|ABA91414.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
Length = 208
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 108/142 (76%), Gaps = 9/142 (6%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSA-------CKVTTAENGMRALEFLGLVDEQEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ C VTT ++G +ALEFLGL D ++ +
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPIST 67
Query: 73 NSNGTKV--NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
S+ +V NL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SS+NIP+RIN CLEEG
Sbjct: 68 QSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 127
Query: 131 AQMFMLKPLKPSDVKKLTGHLI 152
A F LKP++ SD+ KL H++
Sbjct: 128 ADEFFLKPVRLSDMSKLKPHIL 149
>gi|297824073|ref|XP_002879919.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
gi|297325758|gb|EFH56178.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 107/136 (78%), Gaps = 5/136 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN-----G 76
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL + N L+++
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNNPNALSTSPQIHQE 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
++NL+ITDYCMPGMTGY+LLKK+KES+ ++ +PVV++SSEN+P RI+ CLEEGA+ F L
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVKESAALRSIPVVIMSSENVPARISRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLI 152
KP+K +D+ KL H++
Sbjct: 130 KPVKLADLTKLKPHMM 145
>gi|15230202|ref|NP_191263.1| two-component response regulator ARR9 [Arabidopsis thaliana]
gi|51315815|sp|O80366.1|ARR9_ARATH RecName: Full=Two-component response regulator ARR9; AltName:
Full=Response reactor 4
gi|3273202|dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
gi|6911874|emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gi|19699061|gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
gi|22137112|gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gi|332646081|gb|AEE79602.1| two-component response regulator ARR9 [Arabidopsis thaliana]
Length = 234
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 106/140 (75%), Gaps = 11/140 (7%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN---------L 72
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL Q +N +
Sbjct: 10 HVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSNDPNAFSKAPV 67
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
N +VNL+ITDYCMPGMTGY+LLKK+KESS +++PVV++SSEN+P RI+ CLEEGA+
Sbjct: 68 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 127
Query: 133 MFMLKPLKPSDVKKLTGHLI 152
F LKP++ +D+ KL H++
Sbjct: 128 EFFLKPVRLADLNKLKPHMM 147
>gi|15227325|ref|NP_181663.1| two-component response regulator ARR8 [Arabidopsis thaliana]
gi|51315814|sp|O80365.1|ARR8_ARATH RecName: Full=Two-component response regulator ARR8; AltName:
Full=Response reactor 3
gi|3273200|dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
gi|3894192|gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|18491269|gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
gi|110736644|dbj|BAF00286.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|330254865|gb|AEC09959.1| two-component response regulator ARR8 [Arabidopsis thaliana]
Length = 225
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 106/137 (77%), Gaps = 5/137 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN-----G 76
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL + N L+++
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
++NL+ITDYCMPGMTGY+LLKK+KES+ + +PVV++SSEN+P RI+ CLEEGA+ F L
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLIN 153
KP+K +D+ KL H++
Sbjct: 130 KPVKLADLTKLKPHMMK 146
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 106/138 (76%), Gaps = 6/138 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE------QEQQNNLNSN 75
HVLAVDDS++DRK++E LLKNS+ +VTT ++G +ALE LGL DE ++ +
Sbjct: 11 HVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQ 70
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RIN CLE+GA+ F
Sbjct: 71 EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFF 130
Query: 136 LKPLKPSDVKKLTGHLIN 153
LKP+K +D+KKL HL+
Sbjct: 131 LKPVKLADMKKLKSHLLK 148
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS++DRK++E LLK S+ +VT + +AL+FLGL D+++ +LN + +VN+
Sbjct: 16 HVLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDED---DLNVDNIQVNM 72
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGY+LL+++KESS +K++PVV++SSEN+ +RI+ C+ EGA+ F+LKP++
Sbjct: 73 IITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLLKPVQL 132
Query: 142 SDVKKLTGHLIN 153
SDVKKL H++N
Sbjct: 133 SDVKKLRSHILN 144
>gi|297850294|ref|XP_002893028.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
gi|297338870|gb|EFH69287.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
Length = 209
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 104/126 (82%), Gaps = 3/126 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSIVDRK++E LL+ S+CKVTT E+G RAL++LGL D + +NL KVNL
Sbjct: 25 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL-DGGKGASNLKD--LKVNL 81
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG+TGY+LLKKIKESS +EVPVV++SSENI RI ECL+EGA+ F+LKP+K
Sbjct: 82 IVTDYSMPGLTGYDLLKKIKESSAFREVPVVIMSSENILPRIEECLKEGAEEFLLKPVKL 141
Query: 142 SDVKKL 147
+DVK++
Sbjct: 142 ADVKRI 147
>gi|388492888|gb|AFK34510.1| unknown [Medicago truncatula]
Length = 167
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 106/137 (77%), Gaps = 6/137 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK--- 78
HVLAVDDS++DR ++E LLK S+ VT ++G +AL+FLGLV+++ + +S +
Sbjct: 5 HVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAETDQ 64
Query: 79 ---VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LL+KIKES+ +K++PVV+ SSEN+P+RIN CLEEGA+ F
Sbjct: 65 VVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVITSSENVPSRINRCLEEGAEEFF 124
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV KL HL+
Sbjct: 125 LKPVQQSDVNKLKPHLL 141
>gi|148608693|gb|ABQ95670.1| type A response regulator, partial [Malus x domestica]
Length = 194
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 104/131 (79%), Gaps = 3/131 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HV AVDDS VDRK++E LLK S+CKVT ++G RALE+LGL E+ +++ + KVNL
Sbjct: 1 HVFAVDDSHVDRKVIERLLKISSCKVTAVDSGTRALEYLGLDGEK---SSVGFDNMKVNL 57
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLKKIKESS +EVPVV++SSENI TRI+ CLEEGA+ +++KP+K
Sbjct: 58 IITDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILTRIDRCLEEGAEEYIVKPVKL 117
Query: 142 SDVKKLTGHLI 152
SDV +L ++
Sbjct: 118 SDVNRLKNFMM 128
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 106/137 (77%), Gaps = 6/137 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------NNLNSN 75
HVLAVDDSIVDRK++E LLKNS+ +VTT ++G +ALE LGL D + ++ +
Sbjct: 11 HVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSPSSSSPDHQ 70
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CLE+GA+ F
Sbjct: 71 EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEFF 130
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP+K +D+KKL HL+
Sbjct: 131 LKPVKLADMKKLKSHLL 147
>gi|357515051|ref|XP_003627814.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|92885116|gb|ABE87636.1| Response regulator receiver [Medicago truncatula]
gi|355521836|gb|AET02290.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|388516389|gb|AFK46256.1| unknown [Medicago truncatula]
Length = 177
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 105/136 (77%), Gaps = 5/136 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN-----SNG 76
HVLAVDDSI+DR ++E LLK S+ VTT ++ +AL+FLGLV+++ + + + +
Sbjct: 10 HVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDEMRTYDTHVASEINQD 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
VNL+ITDYCMPGMTGY+LL+KIKES K++PVV++SSEN+P+RIN CLEEGA+ F L
Sbjct: 70 VDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLI 152
KP++ SDV KL HL+
Sbjct: 130 KPVQLSDVSKLKPHLL 145
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 105/140 (75%), Gaps = 8/140 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL--------N 73
HVLAVDDS++DRK++E LLK S+ +VTT ++G +ALE LGL DE + + +
Sbjct: 12 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSSASSSPSSSSPD 71
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
VNL+ITDYCMPGMTGY+LL+++K SS +K++PVV++SSEN+P RIN CLE+GA+
Sbjct: 72 HQEVDVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEE 131
Query: 134 FMLKPLKPSDVKKLTGHLIN 153
F LKP+K +D+KKL HL+
Sbjct: 132 FFLKPVKLADMKKLKSHLLR 151
>gi|109631210|gb|ABG35781.1| SRR197 [Striga asiatica]
Length = 211
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HV AVDDS++DRK++E LLK S+ +VTT ++G +ALEFLG + + N +VNL
Sbjct: 11 HVFAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLG----ESCDSPKNQQEIEVNL 66
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITDYCMPGMTGY+LLKK+KESS ++++PVV++SSEN+P+RIN CLEEG + F LKP++
Sbjct: 67 VITDYCMPGMTGYDLLKKMKESSFLRDIPVVILSSENVPSRINRCLEEGTEEFFLKPVRL 126
Query: 142 SDVKKLTGHLI 152
SDV KL H++
Sbjct: 127 SDVNKLRPHMM 137
>gi|225465887|ref|XP_002267375.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090339|emb|CBI40158.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 103/131 (78%), Gaps = 8/131 (6%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDRK +E LLK S+ +VT ++ +ALEFLGL E EQ+ KVNL
Sbjct: 10 HVLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGL-QEAEQER-------KVNL 61
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGY+LL+KIKES+ +K++PVV++SSENIP+RIN CLEEGA+ F LKP++
Sbjct: 62 IITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQL 121
Query: 142 SDVKKLTGHLI 152
SDV KL HL+
Sbjct: 122 SDVNKLRPHLL 132
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 106/138 (76%), Gaps = 8/138 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL-------NS 74
HVLAVDDS++DRK++E LLK S+ +VTT ++G +AL+FLGL E EQ N N
Sbjct: 12 HVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGL-QEDEQSNPDTPFVSPNNH 70
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+VNL+ITDYCMPGMTGY+LLKK+KESS ++ +PVV++SSEN+P+RI CLEEGA+ F
Sbjct: 71 QEVEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEF 130
Query: 135 MLKPLKPSDVKKLTGHLI 152
LKP++ SD+ +L H++
Sbjct: 131 FLKPVRLSDLNRLKPHMM 148
>gi|15221927|ref|NP_173339.1| two-component response regulator ARR7 [Arabidopsis thaliana]
gi|51316125|sp|Q9ZWS7.1|ARR7_ARATH RecName: Full=Two-component response regulator ARR7
gi|8778291|gb|AAF79300.1|AC068602_23 F14D16.20 [Arabidopsis thaliana]
gi|3953603|dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
gi|88193788|gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gi|332191674|gb|AEE29795.1| two-component response regulator ARR7 [Arabidopsis thaliana]
Length = 206
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 104/126 (82%), Gaps = 3/126 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSIVDRK++E LL+ S+CKVTT E+G RAL++LGL D + +NL KVNL
Sbjct: 25 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL-DGGKGASNLKD--LKVNL 81
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG++GY+LLKKIKESS +EVPVV++SSENI RI ECL+EGA+ F+LKP+K
Sbjct: 82 IVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKL 141
Query: 142 SDVKKL 147
+DVK++
Sbjct: 142 ADVKRI 147
>gi|441415442|dbj|BAM74645.1| type-A response regulator [Torenia fournieri]
Length = 213
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/142 (56%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
SSS + HVLAVDDS+VDRK++E L K S+CKVT E+G RAL++LGL + NN
Sbjct: 7 SSSDLNQEFHVLAVDDSLVDRKVIEKLFKISSCKVTAVESGSRALQYLGLDGDLNDANNS 66
Query: 73 --NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
+ G K+NL++TDY MPGMTG+ELL+KIK S ++E+PVVV+SSEN+ RI+ CLEEG
Sbjct: 67 VGSYEGVKLNLIVTDYSMPGMTGFELLQKIKGSKALREIPVVVMSSENVLARIDRCLEEG 126
Query: 131 AQMFMLKPLKPSDVKKLTGHLI 152
A+ F++KP+K SDVK+L +I
Sbjct: 127 AEEFLVKPVKLSDVKRLRDFVI 148
>gi|357160996|ref|XP_003578944.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 225
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 107/135 (79%), Gaps = 5/135 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG----T 77
HVLAVDDS+ DRK++E LLK S+ +VTT ++G +ALEFLG + Q+ +L+++
Sbjct: 11 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGTKALEFLG-IHGQDTPISLHADHLDVEV 69
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSEN+P+RIN CLEEGA F LK
Sbjct: 70 NVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRINRCLEEGANEFFLK 129
Query: 138 PLKPSDVKKLTGHLI 152
P++ SD+ KL H++
Sbjct: 130 PVRLSDMSKLKPHIM 144
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 103/132 (78%), Gaps = 2/132 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN--GTKV 79
HVLAVDDS +DRK+VE LLKNS+ KVTT ++ RALE LG+V N++S+ K+
Sbjct: 9 HVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLAIKI 68
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
NL+ITDYCMP MTGY+LLKK+KESS +KE+PVV++SSEN+ RI C+ EGA+ F+LKPL
Sbjct: 69 NLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPL 128
Query: 140 KPSDVKKLTGHL 151
+ +DVK+L H+
Sbjct: 129 RVADVKRLRSHI 140
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 106/138 (76%), Gaps = 8/138 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL-------NS 74
HVLAVDDS++DRK++E LLK S+ +VTT ++G +AL+FLGL E EQ N N
Sbjct: 12 HVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGL-QEDEQSNPDTPYVSPNNH 70
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+VNL+ITDYCMPGMTGY+LLKK+KESS ++ +PVV++SSEN+P+RI CLEEGA+ F
Sbjct: 71 QEMEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEF 130
Query: 135 MLKPLKPSDVKKLTGHLI 152
LKP++ SD+ +L H++
Sbjct: 131 FLKPVRLSDLNRLKPHMM 148
>gi|297817018|ref|XP_002876392.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
gi|297322230|gb|EFH52651.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 106/138 (76%), Gaps = 7/138 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL---VDEQE----QQNNLNS 74
HVLAVDDS+ DRK +E LL+ S+C+VTT ++G +ALEFLGL +D + ++ +
Sbjct: 8 HVLAVDDSLFDRKYIERLLQKSSCQVTTVDSGSKALEFLGLRQGIDSNDPNALSKSPVTH 67
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+VNL+ITDYCMPGMTGY+LLKK+KESS +++PVV++SSEN+P RI+ CLEEGA+ F
Sbjct: 68 QVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEF 127
Query: 135 MLKPLKPSDVKKLTGHLI 152
LKP++ +D+ KL H++
Sbjct: 128 FLKPVRLADLNKLKPHMM 145
>gi|15222035|ref|NP_177627.1| two-component response regulator ARR15 [Arabidopsis thaliana]
gi|51315904|sp|Q7G8V2.1|ARR15_ARATH RecName: Full=Two-component response regulator ARR15
gi|5882734|gb|AAD55287.1|AC008263_18 Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
[Arabidopsis thaliana]
gi|11870065|gb|AAG40611.1|AF305720_1 response regulator 15 [Arabidopsis thaliana]
gi|12323888|gb|AAG51914.1|AC013258_8 putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gi|332197523|gb|AEE35644.1| two-component response regulator ARR15 [Arabidopsis thaliana]
Length = 206
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 101/126 (80%), Gaps = 3/126 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LLK SACKVTT E+G RAL++LGL D + L KVNL
Sbjct: 19 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL-DGDNGSSGLKD--LKVNL 75
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG+TGYELLKKIKESS ++E+PVV++SSENI RI +C+ EGA+ F+LKP+K
Sbjct: 76 IVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKL 135
Query: 142 SDVKKL 147
+DVK+L
Sbjct: 136 ADVKRL 141
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 100/126 (79%), Gaps = 3/126 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LLK SACKVTT E+G RAL++LGL D + L KVNL
Sbjct: 19 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL-DGDHGSSGLKD--LKVNL 75
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG+TGYELLKKIKESS +E+PVV++SSENI RI +C+ EGA+ F+LKP+K
Sbjct: 76 IVTDYSMPGLTGYELLKKIKESSAFREIPVVIMSSENIQPRIEQCMIEGAEDFLLKPVKL 135
Query: 142 SDVKKL 147
+DVK+L
Sbjct: 136 ADVKRL 141
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 105/142 (73%), Gaps = 5/142 (3%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL-VDEQEQQNN 71
S +P HVLAVDDS VDRK +E LL+ S+CKVT ++ RAL++LGL VDE+
Sbjct: 17 SKFGSPHLLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVDEK----T 72
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ KVNL++TDY MPGMTGYELLKKIKESS K++PVVV+SSENI RI+ CLEEGA
Sbjct: 73 VGLEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFKDIPVVVMSSENILPRIDRCLEEGA 132
Query: 132 QMFMLKPLKPSDVKKLTGHLIN 153
+ F+LKP+K SDV++L LI
Sbjct: 133 EDFLLKPVKLSDVRRLRDSLIK 154
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD-EQEQQNNLNSNGTKVN 80
HVLAVDDS+VDRK++E LLK S+ +VTT ++G +ALE LGL D ++ + VN
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL++GA+ F LKP+K
Sbjct: 71 LIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVK 130
Query: 141 PSDVKKLTGHLIN 153
+D+KKL HL+
Sbjct: 131 LADMKKLKSHLLK 143
>gi|449437731|ref|XP_004136644.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 226
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 106/143 (74%), Gaps = 12/143 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE------------QQ 69
HVLAVDDS++DRK++E LLK S+ +VTT ++G +ALEFLGL+ E +
Sbjct: 10 HVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSS 69
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
N + +VNL+ITDYCMPGMTG++LLKK+KES+ ++ +PVV++SSEN+P+RIN CLEE
Sbjct: 70 PNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEE 129
Query: 130 GAQMFMLKPLKPSDVKKLTGHLI 152
GA+ F LKP++ DV KL H++
Sbjct: 130 GAEEFFLKPVRLCDVNKLKPHMM 152
>gi|356555024|ref|XP_003545839.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 103/136 (75%), Gaps = 5/136 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN-----SNG 76
HVLAVDDSI+DR ++E LLK S+ VTT ++ +AL+FLGLV+++ + +
Sbjct: 10 HVLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDELRTFDTTVASEIHQD 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
+NL+ITDYCMPGMTGY+LL+KIKES +K +PVV++SSEN+P+RIN CLEEGA+ F L
Sbjct: 70 VDINLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLI 152
KP++ +DV KL HL+
Sbjct: 130 KPVQQADVNKLKPHLM 145
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD-EQEQQNNLNSNGTKVN 80
HVLAVDDS+VDRK++E LLK S+ +VTT ++G +ALE LGL D ++ + VN
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL++GA+ F LKP+K
Sbjct: 71 LIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVK 130
Query: 141 PSDVKKLTGHLIN 153
+D+KKL HL+
Sbjct: 131 LADMKKLKSHLLK 143
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 107/139 (76%), Gaps = 8/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL--------N 73
HVLAVDDS++DRK++E LLK S+ +VT ++G +AL+FLGL +E +Q N +
Sbjct: 12 HVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSNPDTVPSVCPND 71
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+VNL+ITDYCMPGMTGY+LLKK+KESS ++++PVV++SSEN+P+RI CLEEGA+
Sbjct: 72 HREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAEE 131
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F LKP++ +D+ +L H++
Sbjct: 132 FFLKPVRLADLNRLKPHMM 150
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 105/135 (77%), Gaps = 3/135 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK--- 78
HVLAVDDSI+DRK++E LLK S+ +VT ++G++ALEFLGL+D + + S
Sbjct: 11 HVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSKSVSQPRSNHI 70
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V+L+ITDY MP +TGY+LL+KIKES ++K++PVV++SSENIP+RIN CLE+GAQ F +KP
Sbjct: 71 VDLIITDYSMPALTGYDLLRKIKESEILKDIPVVIMSSENIPSRINSCLEQGAQEFFVKP 130
Query: 139 LKPSDVKKLTGHLIN 153
++ SDV KL HL+
Sbjct: 131 VQQSDVNKLRPHLMR 145
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD-EQEQQNNLNSNGTKVN 80
HVLAVDDS+VDRK++E LLK S+ +VTT ++G +ALE LGL D ++ + VN
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL++GA+ F LKP+K
Sbjct: 71 LIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVK 130
Query: 141 PSDVKKLTGHLIN 153
+D+KKL HL+
Sbjct: 131 LADMKKLKSHLLK 143
>gi|351721065|ref|NP_001237197.1| uncharacterized protein LOC100527518 [Glycine max]
gi|255632528|gb|ACU16614.1| unknown [Glycine max]
Length = 211
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 105/133 (78%), Gaps = 4/133 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VLAVDDS+VDRK++E LL+ S+CKVT E+G RAL++LGL ++L + KVNL
Sbjct: 27 QVLAVDDSLVDRKVIERLLRISSCKVTVVESGTRALQYLGL---DGGNSSLGFDSVKVNL 83
Query: 82 VITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++TDY MPGMTGYELLKKIK ESSV +E+PVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 84 IMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVK 143
Query: 141 PSDVKKLTGHLIN 153
SDV++L ++
Sbjct: 144 LSDVRRLKDFIMK 156
>gi|116788845|gb|ABK25022.1| unknown [Picea sitchensis]
Length = 208
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 2/130 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD +++RK++E LLK + KVTT ++ RALE LG +EQ SN KVN+
Sbjct: 34 HVLAVDDCLIERKVIEKLLKTNFFKVTTVDSAERALEVLGF--HEEQSTCAASNAFKVNM 91
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGY+LLKK++E+ +KE+PVV++SSEN+P RI CL GA+ F++KPLK
Sbjct: 92 IITDYCMPGMTGYDLLKKVQETKCLKEIPVVIISSENVPQRITSCLAGGAKDFIIKPLKL 151
Query: 142 SDVKKLTGHL 151
+DV KL GH+
Sbjct: 152 ADVTKLKGHI 161
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 109/139 (78%), Gaps = 8/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN-----NLNSNG 76
HVLAVDDS++DRK++E LLK S+ +VT ++G +AL+FLGL +E + N +++ N
Sbjct: 12 HVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSNPDTVPSVSPND 71
Query: 77 TK---VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+ VNL+ITDYCMPGMTGY+LLKK+KESS ++++PVV++SSEN+P+RI CLEEGA+
Sbjct: 72 HREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAEE 131
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F LKP++ +D+ +L H++
Sbjct: 132 FFLKPVRLADLNRLKPHMM 150
>gi|195644464|gb|ACG41700.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 234
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 107/143 (74%), Gaps = 12/143 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------ 69
HVLAVDDSI+DRK++E LLK+S+ +VTT E+G +ALE LGL D +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
++ + V+L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL++
Sbjct: 71 SSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQD 130
Query: 130 GAQMFMLKPLKPSDVKKLTGHLI 152
GA+ F LKP+KP+D+KKL HL+
Sbjct: 131 GAEEFFLKPVKPADMKKLKSHLL 153
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 104/137 (75%), Gaps = 6/137 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS------N 75
HVLAVDDS++DRK++E LLK S+ +VTT ++G +AL+FLGL ++ + S
Sbjct: 10 HVLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHEDDRSSPEIPSVSPNSHQ 69
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNL+ITDYCMPGMTGY+LLKKIKESS +K +PVV++SSEN+P RI CLEEGA+ F
Sbjct: 70 EVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRCLEEGAEEFF 129
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SD+ +L H++
Sbjct: 130 LKPVQLSDLNRLRPHMM 146
>gi|356546360|ref|XP_003541594.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 103/136 (75%), Gaps = 5/136 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN-----SNG 76
HVLAVDDSI+DR ++E LLK S+ VTT ++ +AL+FLGLV+++ + +
Sbjct: 10 HVLAVDDSIIDRMLIERLLKTSSFHVTTLDSATKALKFLGLVEDELRTFDTTVASEIHQD 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
VNL+ITDYCMPG+TGY+LL+KIKES +K +PVV++SSEN+P+RIN CLEEGA+ F L
Sbjct: 70 VDVNLIITDYCMPGLTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLI 152
KP++ +DV KL HL+
Sbjct: 130 KPVQQADVNKLKPHLM 145
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 100/130 (76%), Gaps = 4/130 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS +DRK+VE LLKNS+ KVTT ++ RALE LG+V + N K+NL
Sbjct: 9 HVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAP----VVINAIKINL 64
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMP MTGY+LLKK+KESS +KE+PVV++SSEN+ RI C+ EGA+ F+LKPL+
Sbjct: 65 IITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRV 124
Query: 142 SDVKKLTGHL 151
+DVK+L H+
Sbjct: 125 ADVKRLRSHI 134
>gi|162459025|ref|NP_001104855.1| LOC541630 [Zea mays]
gi|12060384|dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/144 (52%), Positives = 107/144 (74%), Gaps = 13/144 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------ 69
HVLAVDDSI+DRK++E LLK+S+ +VTT E+G +ALE LGL D +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 70 -NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
++ + V+L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL+
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQ 130
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
+GA+ F LKP+KP+D+KKL HL+
Sbjct: 131 DGAEEFFLKPVKPADMKKLKSHLL 154
>gi|346703278|emb|CBX25376.1| hypothetical_protein [Oryza brachyantha]
Length = 215
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 108/142 (76%), Gaps = 9/142 (6%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACK-------VTTAENGMRALEFLGLVDEQEQQNNL 72
P HVLAVDDS+ DRK++E LLK S+ + VTT ++G +ALEFLGL ++ ++
Sbjct: 8 PFHVLAVDDSLPDRKLIERLLKTSSFQGFGFVGVVTTVDSGSKALEFLGLHAHEDSPISV 67
Query: 73 NSNGTK--VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
++ + VNL+ITDYCMPGMTGY+LLKKIKESS ++++PVV++SSENIP+RIN CLEEG
Sbjct: 68 QADQQEAAVNLIITDYCMPGMTGYDLLKKIKESSCLRDIPVVIMSSENIPSRINRCLEEG 127
Query: 131 AQMFMLKPLKPSDVKKLTGHLI 152
A F LKP++ SD+ KL H++
Sbjct: 128 ADEFFLKPVRLSDMSKLKPHIL 149
>gi|388506210|gb|AFK41171.1| unknown [Lotus japonicus]
Length = 174
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 103/131 (78%), Gaps = 3/131 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DR ++E LLK S+ VT ++ +AL FLGLV++ + + + + VNL
Sbjct: 12 HVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALNFLGLVEDMASEIHQDVD---VNL 68
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGY+LL+KIKES +K++PVV++SSEN+P+RIN CLEEGA+ F LKP++
Sbjct: 69 IITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQL 128
Query: 142 SDVKKLTGHLI 152
SDV KL HL+
Sbjct: 129 SDVHKLKPHLM 139
>gi|356541574|ref|XP_003539249.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 187
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 104/138 (75%), Gaps = 6/138 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN-----NLNSN- 75
HVLAVDDS++DR ++E LLK S+ VT ++G +AL+FLGLV+E+ + L S+
Sbjct: 10 HVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEKRNEEPPPCIALESHQ 69
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+VNL+ITDYCMP MTGY+LL+KIKES +K++PVV++SSEN+P RIN CLEEGA F
Sbjct: 70 DVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPARINRCLEEGADEFF 129
Query: 136 LKPLKPSDVKKLTGHLIN 153
LKP++ SDV KL HL+
Sbjct: 130 LKPVQQSDVNKLRPHLMK 147
>gi|255647513|gb|ACU24220.1| unknown [Glycine max]
Length = 191
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 104/138 (75%), Gaps = 8/138 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN------LNSN 75
HVLAVDDS++DR ++E LLK S+ VT ++G +AL+FLGL E EQ+N L S+
Sbjct: 10 HVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLA-EDEQRNKEPPSIALESH 68
Query: 76 -GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+VNL+ITDYCMP MTGY+LLKKIKES +K++PVV++SSEN+P RIN CLE+GA F
Sbjct: 69 QDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADEF 128
Query: 135 MLKPLKPSDVKKLTGHLI 152
LKP++ SDV KL HL+
Sbjct: 129 FLKPVQQSDVNKLRPHLL 146
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 105/142 (73%), Gaps = 13/142 (9%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
S+++ P+PPHVLAVDDSIVDR ++ LL++S +VTT ++G RALE L L D
Sbjct: 2 STTTVTPEPPHVLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDD------- 54
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
V+++ITDYCMP M+GYELLK++KES+ ++E+PVV++SSEN PTRI CLEEGA
Sbjct: 55 ------SVHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGA 108
Query: 132 QMFMLKPLKPSDVKKLTGHLIN 153
+ F++KP++ SDV +L L++
Sbjct: 109 EEFLIKPVRASDVSRLCSRLVS 130
>gi|224053258|ref|XP_002297741.1| type-a response regulator [Populus trichocarpa]
gi|222844999|gb|EEE82546.1| type-a response regulator [Populus trichocarpa]
Length = 203
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 106/139 (76%), Gaps = 8/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN------ 75
HVLAVDD ++DRK++E LLK S+ +VT ++G +ALEFLGL E E +++ ++
Sbjct: 18 HVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSKPASVSPDPY 77
Query: 76 --GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
++N++ITDYCMPGMTGY+LLKKIKES K++PVV++SSEN+P+RIN CL+EGA+
Sbjct: 78 HQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLKEGAEE 137
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F LKP++ SDV KL HL+
Sbjct: 138 FFLKPVQLSDVNKLRPHLM 156
>gi|309951234|emb|CBX43987.1| putative A-type response regulator 5 [Populus x canadensis]
Length = 198
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 104/139 (74%), Gaps = 8/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN--------NLN 73
HVLAVDD ++DRK++E LLK S+ +VT ++G +ALEFLGL E E ++ +
Sbjct: 18 HVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSEPASVSPDPY 77
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
++N++ITDYCMPGMTGY+LLKKIKES K++PVV++SSEN+P+RIN CL+EGA+
Sbjct: 78 HQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLKEGAEE 137
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F LKP++ SDV KL HL+
Sbjct: 138 FFLKPVQLSDVNKLRPHLM 156
>gi|449440724|ref|XP_004138134.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
gi|449477360|ref|XP_004155001.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
Length = 227
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 107/145 (73%), Gaps = 2/145 (1%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S S SS HVLAVDDS VDRK++E LLK+S+C+VT E+G AL++LGL + E
Sbjct: 17 SDESKQRSSGSTQLHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGL--DGE 74
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+ S+ KVNL+ITDY MP MTGYELLKKIKESS +E+PVV++SSENI RI+ CL
Sbjct: 75 TNSVQFSSALKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENIMARIDSCL 134
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLI 152
+EGA+ F++KP+K SDVK+L ++
Sbjct: 135 KEGAEEFIVKPVKLSDVKRLKDFIM 159
>gi|109390454|gb|ABG33766.1| reponse regulator 6 [Musa acuminata]
Length = 156
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 99/124 (79%), Gaps = 4/124 (3%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG--- 76
P HVLAVDDS++DRK++E LLK S+ +VTT ++G +AL+FLGL E ++++++
Sbjct: 33 PFHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSVHADQLDV 92
Query: 77 -TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LLKKIKESS +++PVV++SSENIP+RIN CLEEGA F
Sbjct: 93 EVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLEEGANEFF 152
Query: 136 LKPL 139
LKP+
Sbjct: 153 LKPV 156
>gi|356515915|ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 232
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 107/146 (73%), Gaps = 15/146 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------ 69
HVLAVDDS++DRK++E LL+ S+CKVT ++G +AL++LGL+DE +
Sbjct: 24 HVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESSHP 83
Query: 70 --NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
L G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVV++SSEN+P+RI+ CL
Sbjct: 84 PPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVIMSSENVPSRISMCL 142
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
EEGAQ F+LKPL+ SD+ KL + +
Sbjct: 143 EEGAQEFLLKPLQLSDLDKLQPYFLK 168
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 107/144 (74%), Gaps = 13/144 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------ 69
HVLAVDDSI+DRK++E LLK+S+ +VTT ++G +ALE LGL D +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 70 -NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
++ + V+L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL+
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQ 130
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
+GA+ F LKP+KP+D+KKL HL+
Sbjct: 131 DGAEEFFLKPVKPADMKKLKSHLL 154
>gi|359828772|gb|AEV76988.1| type A response regulator 4, partial [Triticum aestivum]
Length = 203
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 102/139 (73%), Gaps = 7/139 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE-------QEQQNNLNS 74
HVLAVDDS++DRK++E LLK S+ +VTT ++G +ALE LG DE +
Sbjct: 11 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGFRDEGDDSSSPPSSSAPDHH 70
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
VNL+ITDYCMPGMTGY+LL+++K SS +K++PVV++SSEN+P RI+ CLE+GA+ F
Sbjct: 71 QEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 130
Query: 135 MLKPLKPSDVKKLTGHLIN 153
LKP+K +D+KKL HL+
Sbjct: 131 FLKPVKLADMKKLKSHLVR 149
>gi|7594516|emb|CAB88041.1| response regulator-like protein [Arabidopsis thaliana]
Length = 122
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S S S SS + HVLAVDD+++DRK+VE +LK S+CKVTTAENG+RALE+LGL D
Sbjct: 4 GCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 63
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
Q Q + +N KVNL+ITDYCMPGMTG+ELLKK+KESS +KEVPVV++SSENIPTRIN
Sbjct: 64 PQ--QTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
Query: 125 E 125
+
Sbjct: 122 K 122
>gi|297797275|ref|XP_002866522.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312357|gb|EFH42781.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 105/141 (74%), Gaps = 3/141 (2%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
S +P HVLAVDDS VDRK +E LL+ S+CKVT ++ RAL++LGL E++ ++
Sbjct: 17 SKFGSPDLLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLGVEEK---SV 73
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
KVNL++TDY MPGMTGYELLKKIKESS ++VPVV++SSENI RI+ CLEEGA+
Sbjct: 74 GFQDLKVNLIMTDYSMPGMTGYELLKKIKESSAFRQVPVVIMSSENILPRIDRCLEEGAE 133
Query: 133 MFMLKPLKPSDVKKLTGHLIN 153
F+LKP+K SDV++L L+
Sbjct: 134 DFLLKPVKLSDVERLRDSLMK 154
>gi|224066817|ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
gi|222843956|gb|EEE81503.1| type-a response regulator [Populus trichocarpa]
Length = 243
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 106/143 (74%), Gaps = 10/143 (6%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN-------- 70
K HVLAVDDS +DRK++E LLK S+ +VT ++G +ALE+LGL+D + N
Sbjct: 44 KHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSSSSS 103
Query: 71 -NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
+ G KVNL++TDYCMPGM+GY+LLK++K S K+VPVVV+SSENIP+RI CLEE
Sbjct: 104 QSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVK-GSYWKDVPVVVMSSENIPSRIRMCLEE 162
Query: 130 GAQMFMLKPLKPSDVKKLTGHLI 152
GA+ F+LKPL+ SDV+KL HL+
Sbjct: 163 GAEEFLLKPLQLSDVEKLQTHLL 185
>gi|309951230|emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
Length = 242
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 108/146 (73%), Gaps = 16/146 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN--- 75
K HVLAVDDS +DRK++E LLK S+ +VT ++G +ALE+LGL+D +N+N+
Sbjct: 43 KHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLD---SIDNVNATSSS 99
Query: 76 ---------GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
G KVNL++TDYCMPGM+GY+LLK++K S K+VPVVV+SSENIP+RI C
Sbjct: 100 SSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVK-GSYWKDVPVVVMSSENIPSRIRMC 158
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHLI 152
LEEGA+ F+LKPL+ SDV+KL HL+
Sbjct: 159 LEEGAEEFLLKPLQLSDVEKLQTHLL 184
>gi|363807796|ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
gi|255633210|gb|ACU16961.1| unknown [Glycine max]
Length = 172
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 104/138 (75%), Gaps = 8/138 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN------LNSN 75
VLAVDDS++DR ++E LLK S+ VT ++G +AL+FLGLV E EQ+N L S+
Sbjct: 10 QVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLV-EDEQRNKEPPSIALESH 68
Query: 76 -GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+VNL+ITDYCMP MTGY+LLKKIKES +K++PVV++SSEN+P RIN CLE+GA F
Sbjct: 69 QDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADEF 128
Query: 135 MLKPLKPSDVKKLTGHLI 152
LKP++ SDV KL HL+
Sbjct: 129 FLKPVQQSDVNKLRPHLL 146
>gi|449449356|ref|XP_004142431.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527272|ref|XP_004170636.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 173
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 106/144 (73%), Gaps = 11/144 (7%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN-- 71
SS P+ HVLAVDDS+VDRK++E LLK S+ VT ++G +ALE LGLV E+ N+
Sbjct: 5 SSDQPRF-HVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSS 63
Query: 72 --------LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI 123
+ +VNL+ITDYCMP MTG++LL+KIKES +K++PVV++SSEN+P+RI
Sbjct: 64 PISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRI 123
Query: 124 NECLEEGAQMFMLKPLKPSDVKKL 147
N CLEEGA+ F+LKP+K SDV KL
Sbjct: 124 NRCLEEGAEEFLLKPVKLSDVNKL 147
>gi|302781008|ref|XP_002972278.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
gi|300159745|gb|EFJ26364.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
Length = 293
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 103/146 (70%), Gaps = 16/146 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN------ 75
HVLAVDDS +DRK+VE LLKNS+ KVTT ++ RALE LG+V N++S+
Sbjct: 9 HVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLVHFL 68
Query: 76 ----------GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
K+NL+ITDYCMP MTGY+LLKK+KESS +KE+PVV++SSEN+ RI
Sbjct: 69 CFLWLLLLLQAIKINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITM 128
Query: 126 CLEEGAQMFMLKPLKPSDVKKLTGHL 151
C+ EGA+ F+LKPL+ +DVK+L H+
Sbjct: 129 CMAEGAKEFILKPLRVADVKRLRSHI 154
>gi|449453183|ref|XP_004144338.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 261
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 102/137 (74%), Gaps = 6/137 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG----- 76
HVLAVDDS++DRK++E LLK S+ +VTT ++G +ALEFLG +++SN
Sbjct: 17 HVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQ 76
Query: 77 -TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNLVITDYCMP MTGY+LLKKIK S+ ++ +PVV++SSEN+P RIN CLEEGA+ F
Sbjct: 77 EVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEEFF 136
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV +L H++
Sbjct: 137 LKPVQLSDVNRLRPHML 153
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 99/130 (76%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++ +L++S +VTT E+ RALE LGL L +N VN+
Sbjct: 44 HVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGL--------GLITN---VNM 92
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK++KESS +KE+PVV++SSEN+P RIN CLEEGA+ F+LKP++P
Sbjct: 93 IITDYWMPGMTGYELLKRVKESSELKEIPVVIMSSENVPNRINRCLEEGAEDFLLKPVRP 152
Query: 142 SDVKKLTGHL 151
SDV +L +
Sbjct: 153 SDVSRLCSRI 162
>gi|388511259|gb|AFK43691.1| unknown [Lotus japonicus]
Length = 224
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 109/141 (77%), Gaps = 12/141 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN---------- 71
HVLAVDDS++DRK++E LL+ S+CKVT ++G +AL++LGL+D+ + ++
Sbjct: 23 HVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISPQ 82
Query: 72 -LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
+ G KVNL++TD+CMPGM+GY+LLK++K SS K+VPVVV+SSEN+P+RI+ CLEEG
Sbjct: 83 QVEQEGIKVNLIMTDFCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMCLEEG 141
Query: 131 AQMFMLKPLKPSDVKKLTGHL 151
A+ F+LKPL+ SD++KL +
Sbjct: 142 AEKFLLKPLQLSDLEKLQPYF 162
>gi|449533717|ref|XP_004173818.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 255
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 102/137 (74%), Gaps = 6/137 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG----- 76
HVLAVDDS++DRK++E LLK S+ +VTT ++G +ALEFLG +++SN
Sbjct: 17 HVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQ 76
Query: 77 -TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNLVITDYCMP MTGY+LLKKIK S+ ++ +PVV++SSEN+P RIN CLEEGA+ F
Sbjct: 77 EVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEEFF 136
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV +L H++
Sbjct: 137 LKPVQLSDVNRLRPHML 153
>gi|255544001|ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
gi|223548074|gb|EEF49566.1| Two-component response regulator ARR8, putative [Ricinus communis]
Length = 197
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 104/153 (67%), Gaps = 28/153 (18%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL------------------- 62
HVLAVDDS++DRK++E LLK S+ VT ++G +ALEFLGL
Sbjct: 10 HVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSSPI 69
Query: 63 ---VDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
D++ Q+ +VNL+ITDYCMPGMTGY+LL+KIKES K++PVV++SSEN+
Sbjct: 70 SVCPDDEHHQD------LQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENV 123
Query: 120 PTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
P+RIN CLEEGA+ F LKP++ SDV KL H++
Sbjct: 124 PSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMM 156
>gi|302755905|ref|XP_002961376.1| type A response regulator [Selaginella moellendorffii]
gi|300170035|gb|EFJ36636.1| type A response regulator [Selaginella moellendorffii]
Length = 220
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC--KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
HVLAVDDS+VDR ++E LLK S+ KVT ++ +RALE LG+VD Q S G ++
Sbjct: 52 HVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGIQI 111
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDYCMP MTGY+LLK++K S +KE+PVV++SSEN+ RIN C EEGA+ F++KP+
Sbjct: 112 SMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIKPV 171
Query: 140 KPSDVKKL-TGHL 151
K +DVK+L +GHL
Sbjct: 172 KLADVKRLVSGHL 184
>gi|225465889|ref|XP_002266250.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 150
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 102/132 (77%), Gaps = 4/132 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSI+DRK +E LLK S+ +VT + +ALEFLGL + EQ+N+ GTKVNL
Sbjct: 10 HVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGL-QKAEQRNH--HQGTKVNL 66
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+IT Y MPGMTGY+LLKKIKES+ +K +PVV++SSENIP+RIN CL EG + F LKP++
Sbjct: 67 IITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKDFFLKPVQL 125
Query: 142 SDVKKLTGHLIN 153
SDV KL HL+
Sbjct: 126 SDVNKLRPHLLG 137
>gi|302798272|ref|XP_002980896.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
gi|300151435|gb|EFJ18081.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
Length = 222
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC--KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
HVLAVDDS+VDR ++E LLK S+ KVT ++ +RALE LG+VD Q S G ++
Sbjct: 54 HVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGIQI 113
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDYCMP MTGY+LLK++K S +KE+PVV++SSEN+ RIN C EEGA+ F++KP+
Sbjct: 114 SMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIKPV 173
Query: 140 KPSDVKKL-TGHL 151
K +DVK+L +GHL
Sbjct: 174 KLADVKRLVSGHL 186
>gi|359495010|ref|XP_003634897.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR9-like [Vitis vinifera]
Length = 141
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 9/133 (6%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DRK +E LLK S+ +VT ++ +ALEFLG V E EQ+ KVNL
Sbjct: 10 HVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLG-VQEAEQER-------KVNL 61
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK-PLK 140
+ITDY MPGMTGY+LL+KIKES+ +K++PVV++SSENIP+RI CLEEGA+ F LK P++
Sbjct: 62 IITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFFLKLPVQ 121
Query: 141 PSDVKKLTGHLIN 153
SDV KL HL+
Sbjct: 122 LSDVNKLRPHLLG 134
>gi|255646817|gb|ACU23880.1| unknown [Glycine max]
Length = 235
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 108/145 (74%), Gaps = 15/145 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN----------- 71
VLAVDDS++DRK++E LL+ S+CKVT ++G +AL++LGL+DE + ++
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTPLESESSHPP 85
Query: 72 ---LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
L G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVV++SSEN+P+RI+ CLE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVIMSSENVPSRISMCLE 144
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLIN 153
EGA+ F+LKPL+ SD+ KL + +
Sbjct: 145 EGAEEFLLKPLQLSDLDKLQPYFLK 169
>gi|296090340|emb|CBI40159.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 102/132 (77%), Gaps = 4/132 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSI+DRK +E LLK S+ +VT + +ALEFLGL + EQ+N+ GTKVNL
Sbjct: 10 HVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGL-QKAEQRNH--HQGTKVNL 66
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+IT Y MPGMTGY+LLKKIKES+ +K +PVV++SSENIP+RIN CL EG + F LKP++
Sbjct: 67 IITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKDFFLKPVQL 125
Query: 142 SDVKKLTGHLIN 153
SDV KL HL+
Sbjct: 126 SDVNKLRPHLLG 137
>gi|356509391|ref|XP_003523433.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 235
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 106/145 (73%), Gaps = 15/145 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------- 69
VLAVDDS++DRK++E LL+ S+CKVT ++G +AL++LGL+DE +
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTSLESESSHPP 85
Query: 70 -NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
L G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVV++SSEN+P+RI+ CLE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVIMSSENVPSRISMCLE 144
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLIN 153
EGA+ F+LKPL+ SD+ KL + +
Sbjct: 145 EGAEEFLLKPLQLSDLDKLQPYFLK 169
>gi|351724253|ref|NP_001238075.1| uncharacterized protein LOC100527828 [Glycine max]
gi|255633320|gb|ACU17017.1| unknown [Glycine max]
Length = 222
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN-GTKVN 80
HVLAVDDS VDRK++E+LLK ACKVT ++G+RAL+ LGL+DEQ+ + N G KV+
Sbjct: 30 HVLAVDDSTVDRKVIEHLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFVGLKVD 89
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDYCMPGMTGYELLK+IKESS KE PVV++SSEN+ RI+ CLEEGA+ F++KP+K
Sbjct: 90 LIITDYCMPGMTGYELLKRIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVK 149
Query: 141 PSDVKKLTGHL 151
SDVK+L ++
Sbjct: 150 LSDVKRLKDYM 160
>gi|388505720|gb|AFK40926.1| unknown [Lotus japonicus]
Length = 224
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 108/141 (76%), Gaps = 12/141 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN---------- 71
HVLAVDDS++DRK++E LL+ S+CKVT ++G +AL++LGL+D+ + ++
Sbjct: 23 HVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISPQ 82
Query: 72 -LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
+ G KVNL++TD+CMPG +GY+LLK++K SS K+VPVVV+SSEN+P+RI+ CLEEG
Sbjct: 83 QVEQEGIKVNLIMTDFCMPGKSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMCLEEG 141
Query: 131 AQMFMLKPLKPSDVKKLTGHL 151
A+ F+LKPL+ SD++KL +
Sbjct: 142 AEKFLLKPLQLSDLEKLQPYF 162
>gi|351725357|ref|NP_001235042.1| uncharacterized protein LOC100305926 [Glycine max]
gi|255627003|gb|ACU13846.1| unknown [Glycine max]
Length = 223
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/131 (64%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS-NGTKVN 80
HVLAVDDSIVDRK++E+ LK ACKVT ++G+RAL+ LGL+DEQ+ + N G KV+
Sbjct: 30 HVLAVDDSIVDRKVIEHSLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFGGLKVD 89
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+ITDYCMPGMTGYELLKKIKESS KE PVV++SSEN+ RI+ CLEEGA+ F++KP+K
Sbjct: 90 LIITDYCMPGMTGYELLKKIKESSSFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVK 149
Query: 141 PSDVKKLTGHL 151
SDVK+L +
Sbjct: 150 LSDVKRLKDFM 160
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 96/130 (73%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++ +L++S +VTT ++ RALE LGL T VN+
Sbjct: 54 HVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGL-----------GLITDVNM 102
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK++KESS ++E+PVV++SSEN+P RI CLEEGA+ F+LKP++P
Sbjct: 103 IITDYWMPGMTGYELLKRVKESSELREIPVVIMSSENVPNRITRCLEEGAEDFLLKPVRP 162
Query: 142 SDVKKLTGHL 151
SDV +L +
Sbjct: 163 SDVSRLCNRI 172
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 13/137 (9%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
S P PHVLAVDDS VDR ++ +L++S +VT ++ RALE LG +
Sbjct: 13 SAPAAPHVLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELLG-------------S 59
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
G V+++ITDY MP MTGYELLKK+KESS ++E+PVV++SSEN+PTRIN CLEEGA+ F+
Sbjct: 60 GANVSMIITDYWMPDMTGYELLKKVKESSKLREIPVVIMSSENVPTRINRCLEEGAEDFL 119
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV +L ++
Sbjct: 120 LKPVRRSDVSRLCSRVL 136
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 103/141 (73%), Gaps = 14/141 (9%)
Query: 13 SSSSNPKP-PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
S+ + P+P PHVLAVDDSIVDR ++ LL++S +VTT ++G RALE L L
Sbjct: 2 STKTVPEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSL--------- 52
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
V+++ITDYCMP MTG++LLK++KES+ +KE+PVV++SSEN PTRI CLEEGA
Sbjct: 53 ----DRNVHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGA 108
Query: 132 QMFMLKPLKPSDVKKLTGHLI 152
+ F++KP++PSDV +L +I
Sbjct: 109 EDFLIKPVRPSDVSRLCNRVI 129
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 96/133 (72%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR ++ +L++S +VT ++G RALE LG V+
Sbjct: 16 PHVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLG-------------TEPNVS 62
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGYELLKKIKESS +KE+PVV++SSEN+PTRIN CLEEGA+ F+LKP++
Sbjct: 63 MIITDYWMPEMTGYELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVR 122
Query: 141 PSDVKKLTGHLIN 153
PSDV +L ++
Sbjct: 123 PSDVSRLCSRVLR 135
>gi|118489969|gb|ABK96781.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 248
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 112/154 (72%), Gaps = 10/154 (6%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S +S S + + HVLAVDDS VDRK++E LLK S+CKVT ++G AL+ LGL+D+ E+
Sbjct: 22 SPNSKSDNEEEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEE 81
Query: 69 QNNLNS----------NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSEN 118
+ +S G KV+L+ITDYCMPGMTGYELLKKIKESS +E+PVV++SSEN
Sbjct: 82 DKSSSSSSSSSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSEN 141
Query: 119 IPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
+ RI+ CLEEGA+ F+ KP+K SDVK+L + +
Sbjct: 142 VMARIDRCLEEGAEEFIAKPVKLSDVKRLRDYYM 175
>gi|224124816|ref|XP_002319429.1| type-a response regulator [Populus trichocarpa]
gi|222857805|gb|EEE95352.1| type-a response regulator [Populus trichocarpa]
Length = 131
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 96/131 (73%), Gaps = 13/131 (9%)
Query: 22 HVLAV---DDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
HVLAV DD ++DRK +E LL NS KVTTAEN +A+E+LGL D ++ N K
Sbjct: 10 HVLAVEAVDDGLIDRKAIERLLINSEYKVTTAENKKKAIEYLGLAD----GHHTNHGDLK 65
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VNL+ITDYCM GMTGYELLK+IKE +PVVVVSSENIPTRI +C+EEGAQ F+LKP
Sbjct: 66 VNLIITDYCMRGMTGYELLKRIKE------IPVVVVSSENIPTRIKQCMEEGAQEFLLKP 119
Query: 139 LKPSDVKKLTG 149
L+ S V KL+
Sbjct: 120 LQLSGVTKLSA 130
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 100/146 (68%), Gaps = 13/146 (8%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
+S + S PHVLAVDDS VDR ++ +L++S +VT ++G RALE LG
Sbjct: 2 ASRTGSLGGEGSAPHVLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLG------ 55
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
V+++ITDY MP MTGYELLKK+KESS +KE+PVV++SSEN+PTRIN CL
Sbjct: 56 -------TEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVPTRINRCL 108
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
EEGA+ F+LKP++P+DV +L ++
Sbjct: 109 EEGAEDFLLKPVRPADVSRLCSRVLR 134
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 98/134 (73%), Gaps = 13/134 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PP+V+AVDDS VDR ++ LL+ S +VT ++G RALE LG + V
Sbjct: 90 PPYVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-------------SEPNV 136
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDY MP MTGY+LLKKIKESS +K++PVV++SSEN+PTRI+ CLEEGA+ F+LKP+
Sbjct: 137 SMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 196
Query: 140 KPSDVKKLTGHLIN 153
+P+D+ ++T ++
Sbjct: 197 RPADISRITSRMLQ 210
>gi|309951228|emb|CBX43984.1| putative A-type response regulator 2 [Populus x canadensis]
Length = 251
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 113/157 (71%), Gaps = 13/157 (8%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S +S+S + + HVLAVDDS VDRK++E LLK S+CKVT ++G AL+ LGL+D+ E+
Sbjct: 22 SPNSNSDNEEEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEE 81
Query: 69 QNNLNS-------------NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVS 115
+ +S G KV+L+ITDYCMPGMTGYELLKKIKESS +E+PVV++S
Sbjct: 82 DKSSSSSSSSSSFSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMS 141
Query: 116 SENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
SEN+ RI+ CLEEGA+ F+ KP+K SDVK+L + +
Sbjct: 142 SENVMARIDRCLEEGAEEFIAKPVKLSDVKRLRDYYM 178
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 98/134 (73%), Gaps = 13/134 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PP+V+AVDDS VDR ++ LL+ S +VT ++G RALE LG + V
Sbjct: 92 PPYVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-------------SEPNV 138
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDY MP MTGY+LLKKIKESS +K++PVV++SSEN+PTRI+ CLEEGA+ F+LKP+
Sbjct: 139 SMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 198
Query: 140 KPSDVKKLTGHLIN 153
+P+D+ ++T ++
Sbjct: 199 RPADISRITSRMLQ 212
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 98/133 (73%), Gaps = 13/133 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PPHVLAVDDS VDR ++ +L++S +VT ++G RALE LG + V
Sbjct: 27 PPHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLG-------------SEPNV 73
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDY MP MTGYELLKK+KESS +K++PVV++SSEN+PTRI+ CLEEGA+ F++KP+
Sbjct: 74 SMIITDYWMPEMTGYELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPV 133
Query: 140 KPSDVKKLTGHLI 152
+PSDV +L ++
Sbjct: 134 RPSDVSRLFSRVL 146
>gi|109631204|gb|ABG35778.1| SRR201 [Striga asiatica]
Length = 223
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDS+VDRK++E LLK S CK + E+G RAL++LGL E++N+ + KVNL+
Sbjct: 21 VLAVDDSLVDRKVIERLLKISRCKAISVESGTRALQYLGL---DEEKNSSGFDDLKVNLI 77
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TDY MPGMTG+ELL+KIK S+ +K +PVV++SSENI TRI+ CLEEGA+ +++KP+K S
Sbjct: 78 MTDYSMPGMTGFELLQKIKGSAKLKGIPVVILSSENIMTRIDRCLEEGAEEYLVKPVKLS 137
Query: 143 DVKKL 147
DV+++
Sbjct: 138 DVERV 142
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 98/134 (73%), Gaps = 13/134 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PP+V+AVDDS VDR ++ LL+ S +VT ++G RALE LG + V
Sbjct: 91 PPYVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-------------SEPNV 137
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDY MP MTGY+LLKKIKESS +K++PVV++SSEN+PTRI+ CLEEGA+ F+LKP+
Sbjct: 138 SMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 197
Query: 140 KPSDVKKLTGHLIN 153
+P+D+ ++T ++
Sbjct: 198 RPADISRITSRMLQ 211
>gi|168001998|ref|XP_001753701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695108|gb|EDQ81453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 102/135 (75%), Gaps = 4/135 (2%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
S SNP+ HVLAVDDSI+DRK++E LLK S+ KVTT + +RALE+LGL + ++
Sbjct: 1 SMSNPEY-HVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGL--SESCSTSVK 57
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
+N VNL++TDYCMP MTGY+LLK +K E+S KE+PV+V+SSEN RI CLEEGA+
Sbjct: 58 ANKVTVNLIMTDYCMPEMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKRCLEEGAK 117
Query: 133 MFMLKPLKPSDVKKL 147
F++KP++ DV++L
Sbjct: 118 EFLIKPVQIEDVQRL 132
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 15/132 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL--GLVDEQEQQNNLNSNGTKV 79
HVLAVDDS VDR ++ +L++S +VTT E+ RALE L GLV V
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLV-------------PNV 97
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
N++ITDY MPGMTGYELLK++KESS +KE+PVV++SSEN+P RI+ CLEEGA+ F+LKP+
Sbjct: 98 NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPV 157
Query: 140 KPSDVKKLTGHL 151
+PSDV +L +
Sbjct: 158 RPSDVSRLCSRI 169
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 15/132 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL--GLVDEQEQQNNLNSNGTKV 79
HVLAVDDS VDR ++ +L++S +VTT E+ RALE L GLV V
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLV-------------PNV 97
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
N++ITDY MPGMTGYELLK++KESS +KE+PVV++SSEN+P RI+ CLEEGA+ F+LKP+
Sbjct: 98 NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPV 157
Query: 140 KPSDVKKLTGHL 151
+PSDV +L +
Sbjct: 158 RPSDVSRLCSRI 169
>gi|217075290|gb|ACJ86005.1| unknown [Medicago truncatula]
gi|388493820|gb|AFK34976.1| unknown [Medicago truncatula]
Length = 235
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 107/146 (73%), Gaps = 16/146 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL-VDEQEQQNNLN------- 73
HVLAVDDS++DR ++E LL++S+CKVT ++G +AL++LGL +DE +
Sbjct: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESSSPS 82
Query: 74 -------SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVVV+SSEN+P+RI+ C
Sbjct: 83 LPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMC 141
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHLI 152
LEEGA+ F++KPL+ SD++KL + +
Sbjct: 142 LEEGAEEFLMKPLQLSDLQKLQPYFL 167
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 96/132 (72%), Gaps = 15/132 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL--GLVDEQEQQNNLNSNGTKV 79
HVLAVDDS VDR ++ +L++S +VTT ++ RALE L GLV + V
Sbjct: 40 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPD-------------V 86
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
N++ITDY MPGMTGYELLK +KESS ++ +PVV++SSEN+PTRI+ CLEEGA+ F+LKP+
Sbjct: 87 NMIITDYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 146
Query: 140 KPSDVKKLTGHL 151
+P+DV +L +
Sbjct: 147 RPADVSRLCSRI 158
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 96/133 (72%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR ++ +L++S +VT ++G RALE LG + V+
Sbjct: 15 PHVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------SEPNVS 61
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGYELLKK+KESS +KE+PVV++SSEN+ TRIN CLEEGA+ F+LKP++
Sbjct: 62 MIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQ 121
Query: 141 PSDVKKLTGHLIN 153
PSDV +L ++
Sbjct: 122 PSDVSRLCSRVLR 134
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 15/132 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL--GLVDEQEQQNNLNSNGTKV 79
HVLAVDDS VDR ++ +L++S +VTT E+ RALE L GLV V
Sbjct: 32 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLV-------------PNV 78
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
N++ITDY MPGMTGYELLK++KESS +KE+PVV++SSEN+P RI+ CLEEGA+ F+LKP+
Sbjct: 79 NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPV 138
Query: 140 KPSDVKKLTGHL 151
+PSDV +L +
Sbjct: 139 RPSDVSRLCSRI 150
>gi|388511879|gb|AFK44001.1| unknown [Medicago truncatula]
Length = 235
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 107/146 (73%), Gaps = 16/146 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL-VDEQEQQNNLN------- 73
HVLAVDDS++DR ++E LL++S+CKVT ++G +AL++LGL +DE +
Sbjct: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESSSPS 82
Query: 74 -------SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVVV+SSEN+P+RI+ C
Sbjct: 83 LPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMC 141
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHLI 152
LEEGA+ F++KPL+ SD++KL + +
Sbjct: 142 LEEGAEEFLMKPLQLSDLQKLQPYFL 167
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 105/147 (71%), Gaps = 13/147 (8%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
V + ++++ P HVLAVDDS VDR ++ +L++S +VT ++G RALE LGL
Sbjct: 9 VGTDAATAGGGGVVPLHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGL--- 65
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
+ N V+++ITDY MP MTGYELLKK+KESS +K++PVV++SSEN+PTRI+
Sbjct: 66 --EPN--------VSMIITDYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVPTRISR 115
Query: 126 CLEEGAQMFMLKPLKPSDVKKLTGHLI 152
CLEEGA+ F++KP++PSDV ++ ++
Sbjct: 116 CLEEGAEDFLVKPVRPSDVSRVFSRVL 142
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 71/132 (53%), Positives = 96/132 (72%), Gaps = 13/132 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR ++ +L++S +VT ++G RALE LG + V+
Sbjct: 15 PHVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------SEPNVS 61
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGYELLKK+KESS +KE+PVV++SSEN+ TRIN CLEEGA+ F+LKP++
Sbjct: 62 MIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQ 121
Query: 141 PSDVKKLTGHLI 152
PSDV +L ++
Sbjct: 122 PSDVSRLCSRVL 133
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 98/131 (74%), Gaps = 13/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR I+ LL++S +VTT ++G RALE L L E+E V++
Sbjct: 8 HVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSL--ERE-----------VHM 54
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMP MTGYELLK++KE++ ++E+PVV++SSEN P RI CLEEGA+ F++KP++P
Sbjct: 55 IITDYCMPEMTGYELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIKPVRP 114
Query: 142 SDVKKLTGHLI 152
SDV +L L+
Sbjct: 115 SDVSRLCSLLL 125
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 96/132 (72%), Gaps = 15/132 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL--GLVDEQEQQNNLNSNGTKV 79
HVLAVDDS VDR ++ +L++S +VTT ++ RALE L GLV + V
Sbjct: 38 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPD-------------V 84
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
N++ITDY MPGMTGYELLK +KESS ++ +PVV++SSEN+PTRI+ CLEEGA+ F+LKP+
Sbjct: 85 NMIITDYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 144
Query: 140 KPSDVKKLTGHL 151
+P+DV +L +
Sbjct: 145 RPADVSRLCSRI 156
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 96/133 (72%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR ++ +L++S +VT ++G RALE LG + V+
Sbjct: 15 PHVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------SEPNVS 61
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGYELLKK+KESS +KE+PVV++SSEN+ TRIN CLEEGA+ F+LKP++
Sbjct: 62 MIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQ 121
Query: 141 PSDVKKLTGHLIN 153
PSDV +L ++
Sbjct: 122 PSDVSRLCSRVLR 134
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 96/132 (72%), Gaps = 13/132 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L++S +VT ++G RALE LG + V++
Sbjct: 1 HVLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLG-------------SEPNVSM 47
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MP MTGYELLKK+KESS +KE+PVV++SSEN+PTRI+ CLEEGA+ F++KP++P
Sbjct: 48 IITDYWMPEMTGYELLKKVKESSKLKEIPVVIMSSENVPTRISRCLEEGAEDFLMKPVRP 107
Query: 142 SDVKKLTGHLIN 153
SDV +L ++
Sbjct: 108 SDVSRLCSRVLR 119
>gi|359492520|ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
vinifera]
Length = 240
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 104/155 (67%), Gaps = 25/155 (16%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL--------- 72
HVLAVDDS++DRK++E LL S+ VT E+G +ALE+LGL+D ++
Sbjct: 29 HVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSSSSSS 88
Query: 73 ---------------NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSE 117
G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVVV+SSE
Sbjct: 89 SSSSSSSSSSSAKPSQQEGLKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSE 147
Query: 118 NIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
N+P+RIN CLE GA+ F+LKP++ SD++KL HL+
Sbjct: 148 NVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLL 182
>gi|449464160|ref|XP_004149797.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 236
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 102/137 (74%), Gaps = 10/137 (7%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ--------EQQNNLNSN 75
LAVDDS++DRK++E LL S+C+VT E+G +AL +LGL+D + L+ +
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 76 G-TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
KVNL++TD+CMPGM+GY+LLK++K S K++PVVV+SSEN P+RIN CLEEGA+ F
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEF 141
Query: 135 MLKPLKPSDVKKLTGHL 151
+LKPL+ SDVKKL HL
Sbjct: 142 LLKPLQLSDVKKLEPHL 158
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 94/133 (70%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR I+ +L++S +VT E+G RALE LG V+
Sbjct: 17 PHVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG-------------TEPNVS 63
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDYCMP MTGYELLKK+KESS +K++PVV++SSEN+ TRI CLEEGA+ F++KP++
Sbjct: 64 MIITDYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVR 123
Query: 141 PSDVKKLTGHLIN 153
SDV ++ ++
Sbjct: 124 ASDVSRVFSRVLR 136
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 94/133 (70%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR I+ +L++S +VT E+G RALE LG V+
Sbjct: 87 PHVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG-------------TEPNVS 133
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDYCMP MTGYELLKK+KESS +K++PVV++SSEN+ TRI CLEEGA+ F++KP++
Sbjct: 134 MIITDYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVR 193
Query: 141 PSDVKKLTGHLIN 153
SDV ++ ++
Sbjct: 194 ASDVSRVFSRVLR 206
>gi|356549441|ref|XP_003543102.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 211
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 99/132 (75%), Gaps = 7/132 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEF------LGLVDEQEQQNNLNSN 75
HVL VDDS++DRK++E LL++S+CK T ++G +AL+F +L N
Sbjct: 19 HVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKFLGLLDDDLDNSSSTSSESLQLN 78
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
G KVN+++TDYCMPGM+GY+LLK+IK SS K+VPVV++SSEN+P+RI+ CLE GA+ F+
Sbjct: 79 GIKVNMIMTDYCMPGMSGYDLLKRIKGSS-WKDVPVVIMSSENVPSRISMCLEGGAEKFL 137
Query: 136 LKPLKPSDVKKL 147
LKPL+ SD++KL
Sbjct: 138 LKPLQQSDLEKL 149
>gi|296090341|emb|CBI40160.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 91/116 (78%), Gaps = 8/116 (6%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS++DRK +E LLK S+ +VT ++ +ALEFLG V E EQ+ KVNL
Sbjct: 10 HVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLG-VQEAEQER-------KVNL 61
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+ITDY MPGMTGY+LL+KIKES+ +K++PVV++SSENIP+RI CLEEGA+ F LK
Sbjct: 62 IITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFFLK 117
>gi|302141801|emb|CBI19004.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 106/157 (67%), Gaps = 27/157 (17%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS------- 74
HVLAVDDS++DRK++E LL S+ VT E+G +ALE+LGL+D ++ +S
Sbjct: 19 HVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSSSSSS 78
Query: 75 -------------------NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVS 115
G KVNL++TDYCMPGM+GY+LLK++K SS K+VPVVV+S
Sbjct: 79 SSSSSSSSSSSAKPSQQEMQGLKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVMS 137
Query: 116 SENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
SEN+P+RIN CLE GA+ F+LKP++ SD++KL HL+
Sbjct: 138 SENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLL 174
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 94/127 (74%), Gaps = 3/127 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSI+DRK++E LLK S+ KVTT + +RALE+LGL + N VNL
Sbjct: 20 HVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSSSGKPNVRA--VNL 77
Query: 82 VITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++TDYCMPGMTGY+LLK +K E+S KE+PV+V+SSEN RI CL EGA+ F++KP++
Sbjct: 78 IMTDYCMPGMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKSCLAEGAEDFLIKPVQ 137
Query: 141 PSDVKKL 147
DV++L
Sbjct: 138 LEDVQRL 144
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 94/133 (70%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR I+ +L++S +VT E+G RALE LG V+
Sbjct: 32 PHVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG-------------TEPNVS 78
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGYELLKK+KESS +K++PVV++SSEN+ TRI+ CLEEGA+ F++KP++
Sbjct: 79 MIITDYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVR 138
Query: 141 PSDVKKLTGHLIN 153
SDV ++ ++
Sbjct: 139 ASDVSRVFSRVLR 151
>gi|168002910|ref|XP_001754156.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694710|gb|EDQ81057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 97/132 (73%), Gaps = 2/132 (1%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS-NGTKVN 80
HVLAVDDS +D++++E LLK S+ KVTT + +RALE LGL D + +N
Sbjct: 3 HVLAVDDSRIDQRVIEKLLKTSSYKVTTVNSALRALELLGLSDSSPSSIKVPLLQKLDIN 62
Query: 81 LVITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
L++TDYCMP MTGY+LLK++K ++S +KE+PVVV+SSEN RI CL EGA+ F++KP+
Sbjct: 63 LIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSNRIERCLAEGAEEFIIKPV 122
Query: 140 KPSDVKKLTGHL 151
+ +DVK+L GH+
Sbjct: 123 QMADVKRLRGHI 134
>gi|357456553|ref|XP_003598557.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355487605|gb|AES68808.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|357595944|gb|AET86869.1| cytokinin resposne regulator 9 [Medicago truncatula]
Length = 164
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 101/137 (73%), Gaps = 9/137 (6%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK--- 78
HVLAVDDS++DR ++E LLK S+ VT ++G +AL+FLGLV+++ + +S +
Sbjct: 5 HVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAETDQ 64
Query: 79 ---VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
VNL+ITDYCMPGMTGY+LL+KIKES+ +K++PVV++SSEN+ + EEGA+ F
Sbjct: 65 VVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVHQGLT---EEGAEEFF 121
Query: 136 LKPLKPSDVKKLTGHLI 152
LKP++ SDV KL HL+
Sbjct: 122 LKPVQQSDVNKLKPHLL 138
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P V+AVDDS VDR IV LL+ S +VT ++G RALE LG + V+
Sbjct: 28 PCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILG-------------SEPNVS 74
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGY+LLKK+KESS +K +PVV++SSEN+PTRI CLEEGA+ F+LKP++
Sbjct: 75 MIITDYWMPEMTGYDLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVR 134
Query: 141 PSDVKKLTGHLI 152
PSD+ ++T ++
Sbjct: 135 PSDISRITTRML 146
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 97/133 (72%), Gaps = 13/133 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P+V+AVDDS VDR ++ LL+ S KVT ++G RALE L + + N V+
Sbjct: 53 PYVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL------DSEPN-------VS 99
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGY+LLKK+KESS +K++PVV++SSEN+PTRI CLEEGA+ F+LKP++
Sbjct: 100 MIITDYWMPEMTGYDLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVR 159
Query: 141 PSDVKKLTGHLIN 153
PSD+ +++ ++
Sbjct: 160 PSDISRISTRMLQ 172
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 96/134 (71%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PP+V+AVDDS VDR ++ LL+ S + ++G RALE LG + V
Sbjct: 90 PPYVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG-------------SEPNV 132
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ITDY MP MTGY+LLKKIKESS +K++PVV++SSEN+PTRI+ CLEEGA+ F+LKP+
Sbjct: 133 SMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 192
Query: 140 KPSDVKKLTGHLIN 153
+P+D+ ++T ++
Sbjct: 193 RPADISRITSRMLQ 206
>gi|168043274|ref|XP_001774110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674517|gb|EDQ61024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 131
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 96/131 (73%), Gaps = 6/131 (4%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS +D+++VE LL S+ KVTT + +RALE LGL D +S +NL
Sbjct: 6 HVLTVDDSRIDQRVVEKLLMTSSFKVTTVNSALRALELLGLSDSCP-----SSVKPDINL 60
Query: 82 VITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++TDYCMP MTGY+LLK++K ++S +KE+PVVV+SSEN RI CL EGA+ F++KP++
Sbjct: 61 IMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSIRIERCLAEGAEEFIIKPVQ 120
Query: 141 PSDVKKLTGHL 151
+DVK+L GHL
Sbjct: 121 MADVKRLRGHL 131
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P V+AVDD VDR +V LL+ S +VT ++G RALE LG + V+
Sbjct: 48 PCVIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILG-------------SEPNVS 94
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ITDY MP MTGY+LLKK+KESS +K++PVV++SSEN+PTRI CLEEGA+ F+LKP++
Sbjct: 95 MIITDYWMPEMTGYDLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVR 154
Query: 141 PSDVKKLTGHLI 152
PSD+ ++T ++
Sbjct: 155 PSDISRITTRIL 166
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L++S +VTT E+ RA + VN+
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRA-----------LELLALGLLPDVNM 99
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK +KESS ++E+PVV++SSEN+PTRI CLEEGA+ F+LKP++P
Sbjct: 100 IITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRP 159
Query: 142 SDVKKLTGHL 151
SDV +L +
Sbjct: 160 SDVSRLCSRI 169
>gi|168002238|ref|XP_001753821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695228|gb|EDQ81573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 124
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 96/127 (75%), Gaps = 5/127 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS +D++++E LLK S+ +VTT + +RAL+ LGL + + +S +NL
Sbjct: 2 HVLAVDDSSIDQRVIERLLKTSSYRVTTVNSAVRALDVLGL----SESRSASSTRLDINL 57
Query: 82 VITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++TDYCMP MTGY+LLK++K ++S +KE+PVV++SSEN RI CL EGA+ F++KP+K
Sbjct: 58 IMTDYCMPEMTGYDLLKRVKAQTSALKEIPVVLMSSENDSNRIERCLAEGAEEFIIKPVK 117
Query: 141 PSDVKKL 147
+DVK+L
Sbjct: 118 MADVKRL 124
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P HVLAVDD +DRKIVE LLKN++ KVT+ +NG +A+E LGL Q++ + N K+
Sbjct: 18 PIHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGL--SQDKVDKSTYNDQKI 75
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++++TDYCMP M GY+LL +K S +K +PVV++SSE P RI+ CL GA+ F+ KPL
Sbjct: 76 DIILTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAEDFLQKPL 135
Query: 140 KPSDVKKLTGH 150
+ D++KL +
Sbjct: 136 QQKDLQKLRSY 146
>gi|226497480|ref|NP_001147402.1| RR6 - Corn type-A response regulator [Zea mays]
gi|223946411|gb|ACN27289.1| unknown [Zea mays]
gi|414584832|tpg|DAA35403.1| TPA: response regulatorResponse regulator 1 [Zea mays]
Length = 156
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L+ S KVT E+ RA + V++
Sbjct: 37 HVLAVDDSSVDRAVIARILRGSRYKVTAVESATRA-----------LELLALGLLPDVSM 85
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK++KES+ ++ +PVV++SSEN+ TRI CLEEGA+ F+LKP++P
Sbjct: 86 IITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRP 145
Query: 142 SDVKKLTGHL 151
+DV +L +
Sbjct: 146 ADVSRLCSRI 155
>gi|162463265|ref|NP_001104838.1| cytokinin response regulator1 [Zea mays]
gi|4512216|dbj|BAA75253.1| response regulator [Zea mays]
gi|6009895|dbj|BAA85112.1| response regulator 1 [Zea mays]
Length = 157
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L+ S +VT E+ RA + V++
Sbjct: 38 HVLAVDDSSVDRAVIARILRGSRYRVTAVESATRA-----------LELLALGLLPDVSM 86
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK +KES+ ++ +PVV++SSEN+PTRI CLEEGA+ F+LKP++P
Sbjct: 87 IITDYWMPGMTGYELLKCVKESAALRGIPVVIMSSENVPTRITRCLEEGAEGFLLKPVRP 146
Query: 142 SDVKKLTGHL 151
+DV +L +
Sbjct: 147 ADVSRLCSRI 156
>gi|260765421|gb|ACX49754.1| cytokinin response regulator 11 [Zea mays]
Length = 156
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L+ S KVT E+ RA + V++
Sbjct: 37 HVLAVDDSSVDRTVIARILRGSRYKVTAVESATRA-----------LELLALGLLPDVSM 85
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK++KES+ ++ +PVV++SSEN+ TRI CLEEGA+ F+LKP++P
Sbjct: 86 IITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRP 145
Query: 142 SDVKKLTGHL 151
+DV +L +
Sbjct: 146 ADVSRLCSRI 155
>gi|168022134|ref|XP_001763595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685088|gb|EDQ71485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 99/143 (69%), Gaps = 15/143 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK---VTTAENGMRALEFLGLV---------DEQEQQ 69
H+LAVDDS +D+K++E LLK+++ K +TT + +RAL++LGL D
Sbjct: 6 HILAVDDSRIDQKVIERLLKSASYKGTELTTVNSALRALKYLGLSESCASPVMPDVNRIL 65
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLE 128
+L N V+L++TDYCMP MTGYELLK +K E+S K+VPV+++SSEN +RI CL
Sbjct: 66 CDLQRNA--VHLIMTDYCMPEMTGYELLKIVKAETSAFKDVPVILMSSENDSSRIERCLA 123
Query: 129 EGAQMFMLKPLKPSDVKKLTGHL 151
EGA+ F++KP++ DV++L GH+
Sbjct: 124 EGAEEFIIKPVQMKDVQRLQGHI 146
>gi|195611056|gb|ACG27358.1| RR6 - Corn type-A response regulator [Zea mays]
Length = 156
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 86/130 (66%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDR ++ +L+ S KVT E+ RA + V++
Sbjct: 37 HVLAVDDSSVDRAVIARILRGSRYKVTAVESATRA-----------LELLALGLLPDVSM 85
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDY MPGMTGYELLK++KES+ ++ +PVV++SSEN+ TRI LEEGA+ F+LKP++P
Sbjct: 86 IITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRYLEEGAEGFLLKPVRP 145
Query: 142 SDVKKLTGHL 151
+DV +L +
Sbjct: 146 ADVSRLCSRI 155
>gi|414878657|tpg|DAA55788.1| TPA: hypothetical protein ZEAMMB73_373156 [Zea mays]
Length = 123
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL-NSNGTKVN 80
HVLAVDDS+VDRK++E LLK S+ +VTT ++G +ALE LGL D + + VN
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ + Q
Sbjct: 71 LIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRSAPDRIQF 123
>gi|383792043|dbj|BAM10424.1| Type-a response regulator protein, partial [Salix japonica]
Length = 94
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 79/97 (81%), Gaps = 3/97 (3%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDS VDRK++E LLK S+CKVT E+G RAL++LGL +++++ N K++L+
Sbjct: 1 VLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGL---DGEKSSVGFNDLKIHLI 57
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
+TDY MPGMTGYELLKKIKESS +E+PVV++SSENI
Sbjct: 58 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENI 94
>gi|449526812|ref|XP_004170407.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 194
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 47 VTTAENGMRALEFLGLVDEQE------------QQNNLNSNGTKVNLVITDYCMPGMTGY 94
VTT ++G +ALEFLGL+ E + N + +VNL+ITDYCMPGMTG+
Sbjct: 3 VTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGF 62
Query: 95 ELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
+LLKK+KES+ ++ +PVV++SSEN+P+RIN CLEEGA+ F LKP++ DV KL H++
Sbjct: 63 DLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCDVNKLKPHMM 120
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 91/129 (70%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDRK+VE +L +SAC V ++ +A+EFLGL D +EQQ+
Sbjct: 12 VLLVDDSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLKDGKEQQD-------- 63
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++V+TDYCMP MTGY+LLK IK S +K +PV+V+SSEN P RI+ CL+ GA+ +++KP
Sbjct: 64 IDMVLTDYCMPEMTGYDLLKAIKALSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKP 123
Query: 139 LKPSDVKKL 147
L+ DV +L
Sbjct: 124 LRSKDVPRL 132
>gi|168064728|ref|XP_001784311.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664142|gb|EDQ50873.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 149
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 97/138 (70%), Gaps = 9/138 (6%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN---NLNS---- 74
HVLAVDDS+VD++++E LLK VTT ++ +RAL+ LGL + + + + NS
Sbjct: 3 HVLAVDDSMVDQRVIEKLLKPLHA-VTTVDSAVRALDVLGLSETRPSSSKVLHFNSFVQI 61
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIK-ESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+NL++TDY MP MTGY+LLK++K +SS +KE+PVV++SSEN RI CL EGA
Sbjct: 62 KKLDINLIMTDYFMPEMTGYDLLKRVKAKSSALKEIPVVLMSSENDSHRIRRCLAEGADA 121
Query: 134 FMLKPLKPSDVKKLTGHL 151
F+ KP++ +DVK+L G++
Sbjct: 122 FLTKPVQLADVKRLRGYI 139
>gi|3953605|dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana]
Length = 162
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 87/142 (61%), Gaps = 27/142 (19%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
SS +P P HVLAVDDS VDRK +E LL+ S+CKVT ++ RAL++LGL ++ +
Sbjct: 16 SSKFGSPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DVEEKS 72
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ KVNL++TDY MPGMTGYELLKKIK CLEEGA
Sbjct: 73 VGFEDLKVNLIMTDYSMPGMTGYELLKKIK------------------------CLEEGA 108
Query: 132 QMFMLKPLKPSDVKKLTGHLIN 153
+ F+LKP+K SDVK+L L+
Sbjct: 109 EDFLLKPVKLSDVKRLRDSLMK 130
>gi|242049694|ref|XP_002462591.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
gi|241925968|gb|EER99112.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
Length = 123
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 90/131 (68%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR + +LKN +VT E +ALEFL + +N+ VN
Sbjct: 6 PHVLIVDDTFVDRLVASRVLKNCNIQVTIVEGPKQALEFLDV------END-------VN 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TDYCMPGMTGY+LL ++KES +K +PVV++SS+NIP R+ +CL+ GA+ +++KP+K
Sbjct: 53 LILTDYCMPGMTGYDLLLEVKESPKLKHIPVVIMSSDNIPERMQKCLDAGAKEYIIKPIK 112
Query: 141 PSDVKKLTGHL 151
DV ++ ++
Sbjct: 113 AVDVPRILSYI 123
>gi|357496037|ref|XP_003618307.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355493322|gb|AES74525.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 99/184 (53%), Gaps = 56/184 (30%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSI+DR ++E LLK S+ VTT ++ +AL+FLGLV++ + + VNL
Sbjct: 12 HVLAVDDSIIDRMLIERLLKTSSFHVTTMDSASKALKFLGLVEDVASEVH---GDVDVNL 68
Query: 82 VITDYCMPGMTGYELLKKIKES-------------------------------------- 103
+I DYCMPGMTGY+LL+KIK +
Sbjct: 69 IIADYCMPGMTGYDLLRKIKGARKVNLGRLKLKIATKSKLRRLGRVVFLGAKITTLGNLE 128
Query: 104 --SVMKEVPVVVVSSENIPTRIN-------------ECLEEGAQMFMLKPLKPSDVKKLT 148
K++PVV++SSEN+ +RI+ +C EEGA+ F LKP++ SDV KL
Sbjct: 129 GIQTFKDIPVVIMSSENVSSRISSLTYYGLIVCNCIKCFEEGAEEFFLKPVQQSDVNKLK 188
Query: 149 GHLI 152
HL+
Sbjct: 189 PHLL 192
>gi|115458564|ref|NP_001052882.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|87116392|dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa Japonica Group]
gi|113564453|dbj|BAF14796.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|118790814|tpd|FAA00263.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215704280|dbj|BAG93120.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740726|dbj|BAG97382.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 90/129 (69%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDR++V+ LL +SAC V ++ +A+EFLGL +E ++Q
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQ--------A 61
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++V+TDYCMP MTGYELLK IK S +K +PV+V+SSEN P RI+ C+ GA+ F++KP
Sbjct: 62 IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKP 121
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 122 LQSKDVQRL 130
>gi|71273475|emb|CAI79405.1| Type A response regulator 1 [Oryza sativa Indica Group]
gi|218194921|gb|EEC77348.1| hypothetical protein OsI_16028 [Oryza sativa Indica Group]
Length = 231
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 90/129 (69%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDR++V+ LL +SAC V ++ +A+EFLGL +E ++Q
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQ--------A 61
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++V+TDYCMP MTGYELLK IK S +K +PV+V+SSEN P RI+ C+ GA+ F++KP
Sbjct: 62 IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKP 121
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 122 LQSKDVQRL 130
>gi|413951288|gb|AFW83937.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 127
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 84/117 (71%), Gaps = 13/117 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------ 69
HVLAVDDSI+DRK++E LLK+S+ +VTT ++G +ALE LGL D +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 70 -NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
++ + V+L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISR 127
>gi|162459462|ref|NP_001104858.1| response regulator 7 [Zea mays]
gi|12060390|dbj|BAB20582.1| response regulator 7 [Zea mays]
Length = 242
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 9/134 (6%)
Query: 23 VLAVDDSIVDRKIVENLLKN-------SACKVTTAENGMRALEFLGLVDEQEQQNN--LN 73
VL VDDS VDRK+VE LL+N + VT ++G +A+E L L+++ Q ++ +
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAAD 74
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+N +++V+TDYCMP MTGY+LLK IK S +PVVV+SSEN P RI+ CL GA+
Sbjct: 75 ANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAED 134
Query: 134 FMLKPLKPSDVKKL 147
F+LKPLK DV++L
Sbjct: 135 FILKPLKTKDVQRL 148
>gi|194697208|gb|ACF82688.1| unknown [Zea mays]
gi|413922696|gb|AFW62628.1| response regulator 7 [Zea mays]
Length = 242
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 9/134 (6%)
Query: 23 VLAVDDSIVDRKIVENLLKN-------SACKVTTAENGMRALEFLGLVDEQEQQNN--LN 73
VL VDDS VDRK+VE LL+N + VT ++G +A+E L L+++ Q ++ +
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAAD 74
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+N +++V+TDYCMP MTGY+LLK IK S +PVVV+SSEN P RI+ CL GA+
Sbjct: 75 ANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAED 134
Query: 134 FMLKPLKPSDVKKL 147
F+LKPLK DV++L
Sbjct: 135 FILKPLKTKDVQRL 148
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 7/129 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKN---SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDRKIV+ LL N SA VT ++G +A+E LG Q+ Q
Sbjct: 14 RVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLG----QKPQAQEEQQRRS 69
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++V+TDYCMP MTGY+LLK IK + +PVVV+SSEN P RIN CL GA+ F++KP
Sbjct: 70 IDIVLTDYCMPEMTGYDLLKAIKALNSPNPIPVVVMSSENEPQRINRCLTAGAEDFIVKP 129
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 130 LRTKDVQRL 138
>gi|255545370|ref|XP_002513745.1| Two-component response regulator ARR9, putative [Ricinus communis]
gi|223546831|gb|EEF48328.1| Two-component response regulator ARR9, putative [Ricinus communis]
Length = 229
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 94/152 (61%), Gaps = 33/152 (21%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN---------- 71
HVLAVDDS++DRK++E LL+ S+ +VT ++G +ALE+LGL++ E
Sbjct: 41 HVLAVDDSLLDRKLLERLLRVSSYQVTCVDSGDKALEYLGLLNNLENATTASSSSSSFSQ 100
Query: 72 -----------LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
G KVNL++TDYCMPGM+GY+LLK++K S K+VPVVV+
Sbjct: 101 SAPPPPPPQQQQQQEGMKVNLIMTDYCMPGMSGYDLLKRVK-GSPWKDVPVVVM------ 153
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
CLE GA+ F+LKP++ SDV+KL HL+
Sbjct: 154 -----CLEGGAEEFLLKPVQLSDVEKLQTHLL 180
>gi|222628933|gb|EEE61065.1| hypothetical protein OsJ_14923 [Oryza sativa Japonica Group]
Length = 231
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDR++V+ LL +SAC V ++ +AL FLGL ++ ++Q
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKALGFLGLKEKGKEQ--------A 61
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++V+TDYCMP MTGYELLK IK S +K +PV+V+SSEN P RI+ C+ GA+ F++KP
Sbjct: 62 IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKP 121
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 122 LQSKDVQRL 130
>gi|414870674|tpg|DAA49231.1| TPA: hypothetical protein ZEAMMB73_704016 [Zea mays]
Length = 123
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 89/131 (67%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR + +LK +VT E +AL+FL + +N+ VN
Sbjct: 6 PHVLIVDDTFVDRLVASRVLKTCNIQVTMVEGPKQALDFLDV------END-------VN 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TDYCMPGMTGY+LL ++KES +K +PVVV+SS++IP R+ +C++ GA+ +++KP+K
Sbjct: 53 LILTDYCMPGMTGYDLLMEVKESPKLKHIPVVVMSSDHIPQRMQKCMDAGAKEYIIKPIK 112
Query: 141 PSDVKKLTGHL 151
DV ++ ++
Sbjct: 113 AIDVPRILSYI 123
>gi|195656043|gb|ACG47489.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 232
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 12/130 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++ + LL + +C V ++ +A+EFLGL D E+Q
Sbjct: 15 RVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDGGEEQ-------- 66
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
V++V+TDYCMP MTGY+LLK IK + ++ +PVVV+SSE+ P RI+ CL GA+ F++K
Sbjct: 67 AVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVK 126
Query: 138 PLKPSDVKKL 147
PL+ DV++L
Sbjct: 127 PLQSKDVQRL 136
>gi|224034623|gb|ACN36387.1| unknown [Zea mays]
gi|413918403|gb|AFW58335.1| RR1-Corn type-A response regulator [Zea mays]
Length = 232
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 12/130 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++ + LL + +C V ++ +A+EFLGL D E+Q
Sbjct: 15 RVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDGGEEQ-------- 66
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
V++V+TDYCMP MTGY+LLK IK + ++ +PVVV+SSE+ P RI+ CL GA+ F++K
Sbjct: 67 AVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVK 126
Query: 138 PLKPSDVKKL 147
PL+ DV++L
Sbjct: 127 PLQSKDVQRL 136
>gi|226492361|ref|NP_001146526.1| uncharacterized protein LOC100280118 [Zea mays]
gi|219887677|gb|ACL54213.1| unknown [Zea mays]
Length = 127
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 83/117 (70%), Gaps = 13/117 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ------------ 69
HVLAVDDSI+DRK++E LLK+S+ +VTT ++G +ALE LG D +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGPRDNGAEDASPPSSSSSSSS 70
Query: 70 -NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
++ + V+L+ITDYCMPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISR 127
>gi|94966174|emb|CAJ29968.1| response regulator [Zea mays]
gi|413922105|gb|AFW62037.1| response regulator [Zea mays]
Length = 124
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 84/131 (64%), Gaps = 12/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VD S VD + +L + +VT A M ALEFL ++N + V+
Sbjct: 6 PHVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFL------------DANNSHVD 53
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TDYCMP MTGY+LL+++KES +K +PVV+ ++ IP RI EC E GA+ +M+KPLK
Sbjct: 54 LILTDYCMPDMTGYDLLREVKESPRLKHIPVVITCTDVIPERIIECFEGGAEEYMIKPLK 113
Query: 141 PSDVKKLTGHL 151
SDV ++ ++
Sbjct: 114 VSDVPRILSYM 124
>gi|359828770|gb|AEV76987.1| type A response regulator 1, partial [Triticum aestivum]
Length = 209
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 13/129 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKN----SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS VDRK+VE +L + + V ++ +A+EFLGL D +EQ
Sbjct: 5 VLLVDDSPVDRKVVELVLGSNTFAGSFHVVAVDSAKKAMEFLGLKDGKEQA--------- 55
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V++V+TDYCMP MTGY+LLK IK S +K +PV+V+SSEN P RI+ CL+ GA+ +++KP
Sbjct: 56 VDMVLTDYCMPEMTGYDLLKAIKAMSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKP 115
Query: 139 LKPSDVKKL 147
L+ DV +L
Sbjct: 116 LQSKDVPRL 124
>gi|195651747|gb|ACG45341.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 238
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 12/130 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++ + LL +++C V ++ +A+EFLGL D ++Q
Sbjct: 13 RVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQ-------- 64
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+++V+TDYCMP MTGY+LLK IK + +K +PV+V+SSE+ P RI+ CL GA+ F++K
Sbjct: 65 AIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDFIVK 124
Query: 138 PLKPSDVKKL 147
PL+ DV++L
Sbjct: 125 PLQSKDVQRL 134
>gi|94966176|emb|CAJ29969.1| response regulator [Zea mays]
Length = 124
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 12/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VD S VD + +L + +VT A M ALEFL ++N + V+
Sbjct: 6 PHVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFL------------DANNSHVD 53
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TDYCMP MTGY+LL+++KES +K +PVV ++ IP RI EC E GA+ +M+KPLK
Sbjct: 54 LILTDYCMPDMTGYDLLREVKESPRLKHIPVVXTCTDVIPERIIECFEGGAEEYMIKPLK 113
Query: 141 PSDVKKLTGHL 151
SDV ++ ++
Sbjct: 114 VSDVPRILSYM 124
>gi|195651177|gb|ACG45056.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 233
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 86/128 (67%), Gaps = 10/128 (7%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK--VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
VL VDDS VDR++ + LL + +C ++ +A+EFLGL D E+Q V
Sbjct: 15 RVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIDSARKAMEFLGLKDGGEEQ--------AV 66
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++V+TDYCMP MTGY+LLK IK + ++ +PVVV+SSE+ P RI+ CL GA+ F++KPL
Sbjct: 67 DIVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPL 126
Query: 140 KPSDVKKL 147
+ DV++L
Sbjct: 127 QSKDVQRL 134
>gi|242061964|ref|XP_002452271.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
gi|241932102|gb|EES05247.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
Length = 168
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 6/127 (4%)
Query: 27 DDSIVDRKIVENLLKN-----SACKVTTAENGMRALEFLGLVDEQE-QQNNLNSNGTKVN 80
DDS +DRK+VE LL+N + VT ++G +A+E L L+++ + ++N V+
Sbjct: 21 DDSPIDRKVVELLLRNHKGGAAPFHVTAVDSGKKAMEHLRLMEQDSLDSSAAHANELTVD 80
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+V+TDYCMP MTGY+LLK IK S +PVVV+SSEN P RI+ CL GA+ F+LKPLK
Sbjct: 81 IVLTDYCMPEMTGYDLLKAIKALSSPTPIPVVVMSSENEPQRISRCLTAGAEDFILKPLK 140
Query: 141 PSDVKKL 147
DV++L
Sbjct: 141 TKDVQRL 147
>gi|219363715|ref|NP_001137062.1| uncharacterized protein LOC100217235 [Zea mays]
gi|194698206|gb|ACF83187.1| unknown [Zea mays]
gi|224029529|gb|ACN33840.1| unknown [Zea mays]
gi|414587101|tpg|DAA37672.1| TPA: RR1-Corn type-A response regulator [Zea mays]
Length = 244
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 12/130 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++ + LL +++C V ++ +A+EFLGL D ++Q
Sbjct: 13 RVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQ-------- 64
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+++V+TDYCMP MTGY+LLK IK + +K +PV+V+SSE+ P RI+ CL GA+ F++K
Sbjct: 65 AIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDFIVK 124
Query: 138 PLKPSDVKKL 147
PL+ DV++L
Sbjct: 125 PLQSKDVQRL 134
>gi|242081261|ref|XP_002445399.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
gi|241941749|gb|EES14894.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
Length = 123
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 87/131 (66%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR + +LK+ +VT E +AL+FL + +N+ V
Sbjct: 6 PHVLIVDDTFVDRLVASRVLKSCNIQVTIVEGPKQALDFLDV------END-------VK 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TDYCMPGMTGY+LL ++KES + +PVV++SS+NIP RI +CL A+ +++KP+K
Sbjct: 53 LILTDYCMPGMTGYDLLMEVKESPKLNHIPVVIMSSDNIPERIQKCLAARAKEYIIKPIK 112
Query: 141 PSDVKKLTGHL 151
+DV ++ ++
Sbjct: 113 VADVHRIFSYI 123
>gi|242073184|ref|XP_002446528.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
gi|241937711|gb|EES10856.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
Length = 249
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++ + LL +++C V ++ +A+EFLGL D ++
Sbjct: 15 RVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGGKEQ------- 67
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+++V+TDYCMP MTGY+LLK IK + +K +PV+V+SSE+ P RI+ CL GA+ F++K
Sbjct: 68 AIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLSAGAEDFIVK 127
Query: 138 PLKPSDVKKL 147
PL+ DV++L
Sbjct: 128 PLQSKDVQRL 137
>gi|87116398|dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa Japonica Group]
gi|118790879|tpd|FAA00271.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 85/131 (64%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD++VDR +V L +VT E+ M+AL FL + E VN
Sbjct: 4 PHVLVVDDTLVDRHVVSMALMRHNVRVTAVESVMQALMFL----DSEHD---------VN 50
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++++DYCMP MTGY+LL ++K+S + +PVV+ SS+NIP RI +CL+ GA+ ++LKP+K
Sbjct: 51 MIVSDYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVK 110
Query: 141 PSDVKKLTGHL 151
D+ ++ ++
Sbjct: 111 IVDLPRILNYI 121
>gi|242075916|ref|XP_002447894.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
gi|241939077|gb|EES12222.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
Length = 194
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++ + LL +++C V ++ +A+EFLGL D ++
Sbjct: 15 RVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGGKEQT------ 68
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+++V+TDYCMP MTGY+LL+ IK + +K +PV+V+SSE+ P RI+ CL GA+ +++K
Sbjct: 69 -IDMVLTDYCMPEMTGYDLLRAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDYIVK 127
Query: 138 PLKPSDVKKL 147
PL+ DV++L
Sbjct: 128 PLQSKDVQRL 137
>gi|87116400|dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa Japonica Group]
Length = 121
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 84/131 (64%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR ++ L +VT E+ M+AL FL + E VN
Sbjct: 4 PHVLVVDDTHVDRHVISMALMRHNVRVTAVESVMQALVFL----DSEHD---------VN 50
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++++DYCMP MTGY+LL ++K+S + +PV++ SS+NIP RI +C + GA+ ++LKP+K
Sbjct: 51 MIVSDYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAKDYILKPVK 110
Query: 141 PSDVKKLTGHL 151
+DV ++ ++
Sbjct: 111 IADVPRILNYI 121
>gi|27260981|dbj|BAC45098.1| putative response regulator [Oryza sativa Japonica Group]
gi|40253364|dbj|BAD05296.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273489|emb|CAI79412.1| Type A response regulator 8 [Oryza sativa Indica Group]
gi|87116396|dbj|BAE79357.1| typeA response regulator 8 [Oryza sativa Japonica Group]
gi|118790867|tpd|FAA00269.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR +V L +VT E+ M+AL FL + E V+
Sbjct: 4 PHVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL----DSEHD---------VD 50
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++++DYCMP MTGY LL ++K+S + +PVV+ SS+NIP RI +CL+ GA+ ++LKP+K
Sbjct: 51 MIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVK 110
Query: 141 PSDVKKLTGHL 151
DV ++ ++
Sbjct: 111 IVDVPRIMKYI 121
>gi|125561361|gb|EAZ06809.1| hypothetical protein OsI_29053 [Oryza sativa Indica Group]
Length = 185
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ VDR +V L +VT E+ M+AL FL D + V+
Sbjct: 68 PHVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL---DSEHD----------VD 114
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++++DYCMP MTGY LL ++K+S + +PVV+ S+NIP RI +CL+ GA+ ++LKP+K
Sbjct: 115 MIVSDYCMPDMTGYNLLMEVKKSPTLAHLPVVIAFSDNIPERIRKCLDGGAKDYILKPVK 174
Query: 141 PSDVKKLTGHL 151
DV ++ ++
Sbjct: 175 IVDVPRIMNYI 185
>gi|357138640|ref|XP_003570898.1| PREDICTED: two-component response regulator ARR8-like [Brachypodium
distachyon]
Length = 133
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 13/131 (9%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL VDD+ DR ++ LL+ S +VT E ALEFL + QN+ VN
Sbjct: 16 PHVLVVDDTRGDRLVLTYLLQRSHVRVTAVEGVKEALEFL------DSQND-------VN 62
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++++DYCMP M GY+LL ++K S + +PVV+ SS+NIP RI +CL+ GA+ +++KP++
Sbjct: 63 MIVSDYCMPEMNGYDLLMEVKNSPPLAHIPVVIASSDNIPERIQKCLDGGAKEYIVKPVQ 122
Query: 141 PSDVKKLTGHL 151
DV ++ ++
Sbjct: 123 IPDVLRILRYI 133
>gi|46390908|dbj|BAD16423.1| putative response regulator 7 [Oryza sativa Japonica Group]
gi|71273477|emb|CAI79406.1| Type A response regulator 2 [Oryza sativa Indica Group]
gi|87116394|dbj|BAE79356.1| typeA response regulator 2 [Oryza sativa Japonica Group]
gi|118790824|tpd|FAA00264.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215697882|dbj|BAG92075.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 26/148 (17%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC--------------KVTTAENGMRALEFLGLVDEQEQ 68
VL VDDS VDR++VE LL+ + C VT ++G +A+E LG +
Sbjct: 8 VLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLG--RRRGD 64
Query: 69 QNNLN---------SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
+++L +N +++V+TDYCMP MTGY+LLK IK +PVVV+SSEN
Sbjct: 65 RDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENE 124
Query: 120 PTRINECLEEGAQMFMLKPLKPSDVKKL 147
P RI+ CL GA+ F+LKPLK +DV++L
Sbjct: 125 PQRISRCLTAGAEDFILKPLKMNDVQRL 152
>gi|297599428|ref|NP_001047142.2| Os02g0557800 [Oryza sativa Japonica Group]
gi|255671003|dbj|BAF09056.2| Os02g0557800, partial [Oryza sativa Japonica Group]
Length = 306
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 26/148 (17%)
Query: 23 VLAVDDSIVDRKIVENLLKNSAC--------------KVTTAENGMRALEFLGLVDEQEQ 68
VL VDDS VDR++VE LL+ + C VT ++G +A+E LG +
Sbjct: 62 VLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLG--RRRGD 118
Query: 69 QNNLN---------SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
+++L +N +++V+TDYCMP MTGY+LLK IK +PVVV+SSEN
Sbjct: 119 RDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENE 178
Query: 120 PTRINECLEEGAQMFMLKPLKPSDVKKL 147
P RI+ CL GA+ F+LKPLK +DV++L
Sbjct: 179 PQRISRCLTAGAEDFILKPLKMNDVQRL 206
>gi|125539898|gb|EAY86293.1| hypothetical protein OsI_07664 [Oryza sativa Indica Group]
Length = 205
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 89/149 (59%), Gaps = 26/149 (17%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC--------------KVTTAENGMRALEFLGLVDEQE 67
VL VDDS VDR++VE LL+ + C VT ++G +A+E LG +
Sbjct: 7 RVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGR--RRG 63
Query: 68 QQNNLN---------SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSEN 118
+++L +N +++V+TDYCMP MTGY+LLK IK +PVVV+SSEN
Sbjct: 64 DRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSEN 123
Query: 119 IPTRINECLEEGAQMFMLKPLKPSDVKKL 147
P RI+ CL GA+ F+LKPLK +DV++L
Sbjct: 124 EPQRISRCLTAGAEDFILKPLKMNDVQRL 152
>gi|32479678|emb|CAE02513.1| P0076O17.11 [Oryza sativa Japonica Group]
Length = 108
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 12/108 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSAC----KVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
VL VDDS VDR++V+ LL +SAC V ++ +A+EFLGL +E ++Q
Sbjct: 9 RVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQA------- 61
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
+++V+TDYCMP MTGYELLK IK S +K +PV+V+SSEN P RI+
Sbjct: 62 -IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISR 108
>gi|219888705|gb|ACL54727.1| unknown [Zea mays]
gi|413951287|gb|AFW83936.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 144
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 57/65 (87%)
Query: 88 MPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKL 147
MPGMTGY+LLK++K SS +K++PVV++SSEN+P RI+ CL++GA+ F LKP+KP+D+KKL
Sbjct: 1 MPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMKKL 60
Query: 148 TGHLI 152
HL+
Sbjct: 61 KSHLL 65
>gi|37956247|gb|AAP32005.1| putative two-component system response regulator [Populus tremula x
Populus alba]
Length = 74
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%)
Query: 87 CMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKK 146
CMPGMTGYELLKKIKESS +E+PVV++SSEN+ RI+ CLEEGA+ F+ KP+K SDVK+
Sbjct: 1 CMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLEEGAEEFIAKPVKLSDVKR 60
Query: 147 LTGHLI 152
L + +
Sbjct: 61 LRDYYM 66
>gi|223942921|gb|ACN25544.1| unknown [Zea mays]
gi|413918402|gb|AFW58334.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 179
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 57 LEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS 116
+EFLGL D E+Q V++V+TDYCMP MTGY+LLK IK + ++ +PVVV+SS
Sbjct: 1 MEFLGLKDGGEEQ--------AVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSS 52
Query: 117 ENIPTRINECLEEGAQMFMLKPLKPSDVKKL 147
E+ P RI+ CL GA+ F++KPL+ DV++L
Sbjct: 53 EDEPQRISRCLSAGAEDFIVKPLQSKDVQRL 83
>gi|357463579|ref|XP_003602071.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355491119|gb|AES72322.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 128
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 17/106 (16%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL-VDEQEQQNNLN------- 73
HVLAVDDS++DR ++E LL++S+CKVT ++G +AL++LGL +DE +
Sbjct: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESSSPS 82
Query: 74 -------SNGTKVNLVITDYCMPGMTGYELLK--KIKESSVMKEVP 110
G KVNL++TDYCMPGM+GY+LLK K+K SS + +P
Sbjct: 83 LPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKVKISSFPRHLP 128
>gi|27260986|dbj|BAC45103.1| response regulator-like protein [Oryza sativa Japonica Group]
gi|125603232|gb|EAZ42557.1| hypothetical protein OsJ_27123 [Oryza sativa Japonica Group]
Length = 167
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 13/112 (11%)
Query: 40 LKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKK 99
L + +VT E+ M+AL FL D + VN++++DYCMP MTGY+LL +
Sbjct: 69 LARRSIRVTAVESVMQALMFL---DSEHD----------VNMIVSDYCMPDMTGYDLLME 115
Query: 100 IKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
+K+S + +PVV+ SS+NIP RI +CL+ GA+ ++LKP+K D+ ++ ++
Sbjct: 116 VKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDLPRILNYI 167
>gi|125561365|gb|EAZ06813.1| hypothetical protein OsI_29056 [Oryza sativa Indica Group]
Length = 167
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 13/112 (11%)
Query: 40 LKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKK 99
L + +VT E+ M+AL FL D + VN++++DYCMP MTGY+LL +
Sbjct: 69 LARRSIRVTAVESVMQALMFL---DSEHD----------VNMIVSDYCMPDMTGYDLLME 115
Query: 100 IKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
+K+S + +PVV+ SS+NIP RI +CL+ GA+ ++LKP+K D+ ++ ++
Sbjct: 116 VKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDLPRILNYI 167
>gi|297726345|ref|NP_001175536.1| Os08g0358800 [Oryza sativa Japonica Group]
gi|38637522|dbj|BAD03775.1| putative response regulator [Oryza sativa Japonica Group]
gi|118790937|tpd|FAA00272.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125603143|gb|EAZ42468.1| hypothetical protein OsJ_27037 [Oryza sativa Japonica Group]
gi|255678389|dbj|BAH94264.1| Os08g0358800 [Oryza sativa Japonica Group]
Length = 135
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 69/106 (65%), Gaps = 13/106 (12%)
Query: 46 KVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSV 105
+VT E+ M+AL FL + VN++++DYCMP MTGY+LL ++K+S
Sbjct: 43 RVTAVESVMQALVFL-------------DSEHDVNMIVSDYCMPEMTGYDLLMEVKKSPR 89
Query: 106 MKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
+ +PV++ SS+NIP RI +C + GA+ ++LKP+K +DV ++ ++
Sbjct: 90 LVHLPVIIASSDNIPERIRKCFDGGAKDYILKPVKIADVPRILNYI 135
>gi|222623065|gb|EEE57197.1| hypothetical protein OsJ_07146 [Oryza sativa Japonica Group]
Length = 158
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
N +++V+TDYCMP MTGY+LLK IK +PVVV+SSEN P RI+ CL GA+ F
Sbjct: 26 NDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDF 85
Query: 135 MLKPLKPSDVKKL 147
+LKPLK +DV++L
Sbjct: 86 ILKPLKMNDVQRL 98
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
SS P HVL VDD + R ++ +LL +VT+A +G+ AL L
Sbjct: 39 SSQQGQPSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLL----------- 87
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
S LV+TD CMP + G +LL +K+ + ++ VPVV++SS + + EC+++GA
Sbjct: 88 RGSAPDTFQLVLTDVCMPELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGA 147
Query: 132 QMFMLKPLKPSDVKKLTGHL 151
+ +++KP+ +V+ + H+
Sbjct: 148 EEYLVKPVTKKEVQHIWQHV 167
>gi|413918400|gb|AFW58332.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 168
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 55/69 (79%)
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V++V+TDYCMP MTGY+LLK IK + ++ +PVVV+SSE+ P RI+ CL GA+ F++KP
Sbjct: 4 VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKP 63
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 64 LQSKDVQRL 72
>gi|413918401|gb|AFW58333.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 170
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 55/69 (79%)
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V++V+TDYCMP MTGY+LLK IK + ++ +PVVV+SSE+ P RI+ CL GA+ F++KP
Sbjct: 6 VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKP 65
Query: 139 LKPSDVKKL 147
L+ DV++L
Sbjct: 66 LQSKDVQRL 74
>gi|449529439|ref|XP_004171707.1| PREDICTED: two-component response regulator ARR8-like, partial
[Cucumis sativus]
Length = 109
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ--------EQQNNLNSN 75
LAVDDS++DRK++E LL S+C+VT E+G +AL +LGL+D + L+ +
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 76 G-TKVNLVITDYCMPGMTGYELLKKIK 101
KVNL++TD+CMPGM+GY+LLK++K
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK 109
>gi|315644507|ref|ZP_07897639.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
gi|315280014|gb|EFU43311.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
Length = 1031
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 13/144 (9%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S S S + PK P VL VDD V+ +++ +LL + TA NG++ALE +
Sbjct: 685 SDPSGSRTYPKGPTVLLVDDDPVNLQVLRSLLFAENYNLLTASNGVQALEHI-------- 736
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+G ++LVITD+ MPGM+G +L + ++E + E+P++++++ ++P + L+
Sbjct: 737 -----RSGQGIDLVITDWMMPGMSGLQLCRTVREQHTLFELPILMLTARSLPEDVRTGLQ 791
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
GA F+ KP+ +++ +L+
Sbjct: 792 AGANDFLRKPVDADELRARVRNLL 815
>gi|242280189|ref|YP_002992318.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
gi|242123083|gb|ACS80779.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
Length = 122
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V ++K KVTTAE+G+ LE L +D KV
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSLD-------------KV 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+I+D MP M G+ +K ++E K++P++V+S+E I L GA ++M+KP
Sbjct: 49 DLIISDVNMPRMDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLSLGANLYMVKPA 108
Query: 140 KP 141
+P
Sbjct: 109 QP 110
>gi|436841790|ref|YP_007326168.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170696|emb|CCO24067.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 122
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 13/127 (10%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V ++K KVTTAE+G+ LE L + KV
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-------------YSAEKV 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+I+D MP M G+ +K ++E K++P++V+S+E I L GA ++M+KP
Sbjct: 49 DLIISDVNMPRMDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLNLGANLYMVKPA 108
Query: 140 KPSDVKK 146
+P + K
Sbjct: 109 QPEKMVK 115
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 16/148 (10%)
Query: 9 SSSSSSSSNPKPP---HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
+S++S P HVL VDD + R + +LL+ +VTTAE+G ALE L
Sbjct: 8 TSATSGGDGPTATSDVHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELL----- 62
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
GT+ +L++TD MPG+ G LL+ ++ ++++PV+++S+ +
Sbjct: 63 --------RRGTEFHLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTVFR 114
Query: 126 CLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
C++ GA+ ++LKP+ VK + H+
Sbjct: 115 CIQYGAEDYLLKPVSRKAVKHMWQHVWR 142
>gi|414586308|tpg|DAA36879.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 148
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 13/81 (16%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVLAVDDS VDR ++ +L++S +VT ++G RALE LG V+
Sbjct: 16 PHVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLG-------------TEPNVS 62
Query: 81 LVITDYCMPGMTGYELLKKIK 101
++ITDY MP MTGYELLKKIK
Sbjct: 63 MIITDYWMPEMTGYELLKKIK 83
>gi|239907979|ref|YP_002954720.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239797845|dbj|BAH76834.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 122
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V +++ KVT AE+G+ LE L D+Q V
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-YTDQQ------------V 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+ITD MP M G +K ++E + +++P+VV+S+E I+ L GA ++M+KP
Sbjct: 49 DLIITDINMPRMDGITFIKTVREQDIYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPA 108
Query: 140 KP----SDVKKLTG 149
+P +VK L G
Sbjct: 109 QPEIMVRNVKMLLG 122
>gi|222640462|gb|EEE68594.1| hypothetical protein OsJ_27121 [Oryza sativa Japonica Group]
Length = 123
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 56/73 (76%)
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V+++++DYCMP MTGY LL ++K+S + +PVV+ SS+NIP RI +CL+ GA+ ++LKP
Sbjct: 51 VDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKP 110
Query: 139 LKPSDVKKLTGHL 151
+K DV ++ ++
Sbjct: 111 VKIVDVPRIMKYI 123
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 18/145 (12%)
Query: 12 SSSSSNPKPP-----HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
S+SS N P HVL VDD + R + +LL+ +VT AE+G ALE L
Sbjct: 16 STSSLNDGPVTTSDVHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELL------ 69
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
GT+ ++++TD MPG+ G LL+ ++ ++++PVV++S+ + C
Sbjct: 70 -------RRGTEFHMLLTDVMMPGIDGPALLQIVRNDERLRDMPVVMMSANEHSDTVFRC 122
Query: 127 LEEGAQMFMLKPLKPSDVKKLTGHL 151
++ GA+ ++LKP+ VK + H+
Sbjct: 123 IQHGAEDYLLKPVSRRAVKHMWTHV 147
>gi|357633416|ref|ZP_09131294.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|386391833|ref|ZP_10076614.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
gi|357581970|gb|EHJ47303.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|385732711|gb|EIG52909.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
Length = 122
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V +++ KVT AE+G+ LE L +V
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-------------YTDPQV 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+ITD MP M G +K ++E V +++P+VV+S+E I+ L GA ++M+KP
Sbjct: 49 DLIITDINMPRMDGITFIKTVREQEVYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPA 108
Query: 140 KP----SDVKKLTG 149
+P +VK L G
Sbjct: 109 QPEVMVRNVKMLLG 122
>gi|376295008|ref|YP_005166238.1| response regulator receiver, CheY [Desulfovibrio desulfuricans
ND132]
gi|323457569|gb|EGB13434.1| response regulator receiver, CheY [Desulfovibrio desulfuricans
ND132]
Length = 122
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V ++K KVTTAE+G+ LE L + + V
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-------------YSLSHV 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+++D MP M G +K ++E + +++P+VV+S+E I L GA ++M+KP
Sbjct: 49 DLIVSDVNMPRMDGLTFIKTVREQAAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMIKPA 108
Query: 140 KP----SDVKKLTG 149
+P +VK L G
Sbjct: 109 QPEKLVRNVKMLLG 122
>gi|410464253|ref|ZP_11317706.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982639|gb|EKO39075.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 122
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V +++ KVT AE+G+ LE L D+Q V
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-YTDQQ------------V 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+ITD MP M G +K ++E + +++P+VV+S+E I+ L GA ++M+KP
Sbjct: 49 DLIITDINMPRMDGITFIKTVREQDLYRDIPIVVLSTEGEERDIHVGLSIGANLYMVKPA 108
Query: 140 KP----SDVKKLTG 149
+P +VK L G
Sbjct: 109 QPEIMVRNVKMLLG 122
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
+SS+P HVL VDD V R +V +LK +VTTA +G A+ L
Sbjct: 2 ASSSPADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL------------- 48
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
GT+ NL++TD MP + G LL ++ + +E+PVV++SS + C+ GA+
Sbjct: 49 ERGTQFNLLLTDVMMPDVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAED 108
Query: 134 FMLKPLKPSDVKKLTGHL 151
++LKP+ VK + H+
Sbjct: 109 YLLKPVTKKAVKHMWAHV 126
>gi|308067232|ref|YP_003868837.1| regulator of cell autolysis [Paenibacillus polymyxa E681]
gi|305856511|gb|ADM68299.1| Putative regulator of cell autolysis [Paenibacillus polymyxa E681]
Length = 1039
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG-TK 78
P VLAVDD V+ +++E LL + C V ++ AL L NG T+
Sbjct: 704 PYKVLAVDDDEVNLRVLEELLYTTGCSVVAVDHAEEALHML--------------NGRTR 749
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LVITD+ MP M+G EL ++I+E + E+PV+++++ ++P I GA F+ KP
Sbjct: 750 FDLVITDWMMPEMSGIELCRRIRERYSLSELPVLLLTARDLPGDIRAGFMAGANDFLRKP 809
Query: 139 LKPSDVKKLTGHLIN 153
+ ++K L+N
Sbjct: 810 VDAEELKARVRTLLN 824
>gi|22298565|ref|NP_681812.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
gi|22294745|dbj|BAC08574.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
Length = 871
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
+S S P P VL VDDSI R++++ +L+ + V +G AL+FL
Sbjct: 728 ASPMESPQQPITPQVLIVDDSITVRRLLDRVLRQAGYNVVQCRDGKEALDFL-------- 779
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+ G +V+LVITD MP + GY+LL+ I+ S+ ++ +PV +++S T + L+
Sbjct: 780 ----LAAGDQVSLVITDIEMPRLDGYDLLEAIRLSARLRHLPVAMLTSRGGDTHRQKALQ 835
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
GA ++ KP +P + + L+
Sbjct: 836 LGANGYITKPFQPQGILQTVTQLL 859
>gi|94987584|ref|YP_595517.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|442556438|ref|YP_007366263.1| response regulator receiver protein [Lawsonia intracellularis N343]
gi|94731833|emb|CAJ55196.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|441493885|gb|AGC50579.1| response regulator receiver protein [Lawsonia intracellularis N343]
Length = 122
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 13/120 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R ++ + K+ +VTTAE+G+ LE L VD KV+L
Sbjct: 4 HILVVDDSKTVRNLMSFVFKSKGYQVTTAEDGLDGLEKLYSVD-------------KVDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G+ +K ++E + + +P++++S+E I + ++ GA ++M+KP +P
Sbjct: 51 IVSDINMPRMDGFTFIKSVREQDLYRNIPIIILSTEKEDEDIKKGMKFGANLYMVKPAQP 110
>gi|218885879|ref|YP_002435200.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756833|gb|ACL07732.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 122
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R +V ++K KVTTAE+G+ LE L + KV+L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-------------YSSEKVDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G+ +K ++E +++P+VV+S+E I + GA ++M+KP +P
Sbjct: 51 IISDVNMPRMDGFTFIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQP 110
Query: 142 SDVKK 146
+ K
Sbjct: 111 EKMVK 115
>gi|226875187|gb|ACO88941.1| cytokinin A-type response regulator 1 [Vitis vinifera]
Length = 65
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%)
Query: 95 ELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ELLKKIKESS +E PVV++SSENI TRI+ CLEEGA+ F++KP+K SDVK+L ++
Sbjct: 1 ELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVKRLKDYM 57
>gi|303247352|ref|ZP_07333625.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302491266|gb|EFL51155.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 122
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDDS R +V +++ KVT AE+G+ LE L +V
Sbjct: 2 PKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-------------YTDPQV 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+ITD MP M G +K ++E +++P+VV+S+E I+ L GA ++M+KP
Sbjct: 49 DLIITDINMPRMDGITFIKTVREQDAYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPA 108
Query: 140 KP----SDVKKLTG 149
+P +VK L G
Sbjct: 109 QPEVMVRNVKMLLG 122
>gi|310639938|ref|YP_003944696.1| sensor protein [Paenibacillus polymyxa SC2]
gi|309244888|gb|ADO54455.1| Sensor protein [Paenibacillus polymyxa SC2]
Length = 1046
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG-TK 78
P VLAVDD V+ +++E LL + C V ++ AL+ L NG +
Sbjct: 712 PYRVLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL--------------NGRAR 757
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LVITD+ MP M+G EL ++I+E + E+PV+++++ ++P I+ GA F+ KP
Sbjct: 758 FDLVITDWMMPEMSGIELCRRIREGYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKP 817
Query: 139 LKPSDVKKLTGHLIN 153
+ ++K L+N
Sbjct: 818 VDAEELKARVRTLLN 832
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDD + R + +L+ +VTT E+G A+E L GT+ NL
Sbjct: 52 HVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELL-------------RRGTEFNL 98
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TD MP + G +LL+ ++ S ++PV+++S+ + EC+ GA ++LKP+
Sbjct: 99 LLTDVMMPDIDGPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTV 158
Query: 142 SDVKKLTGHL 151
VK L H+
Sbjct: 159 KQVKLLWQHV 168
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL V+D V K VE LL+ KVT A NG A++ L +G KV+L
Sbjct: 4 HVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVL---------TACRHSGVKVDL 54
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TD MP +TG++L+ ++ +VPVVV+SS++ + + + GA +++KP++
Sbjct: 55 ILTDILMPEVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRK 114
Query: 142 SDVKKLTGHL 151
+++ L H+
Sbjct: 115 NELATLWQHV 124
>gi|452851441|ref|YP_007493125.1| Response regulator receiver protein [Desulfovibrio piezophilus]
gi|451895095|emb|CCH47974.1| Response regulator receiver protein [Desulfovibrio piezophilus]
Length = 122
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R +V ++K KVT+AE+G+ LE L + T+V+L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTSAEDGLDGLEKL-------------YSATEVDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G +K ++E +++P+VV+S+E I L GA ++M+KP +P
Sbjct: 51 IVSDVNMPRMDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQP 110
Query: 142 ----SDVKKLTG 149
+VK L G
Sbjct: 111 EKLVRNVKMLLG 122
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
S ++ +P H+L VDD V RKI+E+ LK VT NG A L
Sbjct: 172 SVNTYSPSKVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNIL----------- 220
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI-NECLEEG 130
+N N TK +LV+TD MP ++G++LL++I + + +K VPV+++S I + N+ ++ G
Sbjct: 221 INGN-TKYDLVLTDVMMPNISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKIG 279
Query: 131 AQMFMLKPLKPSDVKKLTGHLIN 153
Q F+ KP+ +KK ++N
Sbjct: 280 GQDFLTKPIAKELLKKKIDTVLN 302
>gi|60893116|gb|AAX37306.1| CheY [Desulfovibrio gigas]
Length = 123
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 17/132 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++L VDDS R +V +LK KVT AENG+ LE L +++ V+L
Sbjct: 5 NILIVDDSKTVRNLVAFILKKEGYKVTAAENGLDGLEKLYSMEQ-------------VDL 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G+ ++ ++E + +++P+VV+S+E I + L+ GA ++M+KP +P
Sbjct: 52 IISDINMPKMDGFTFIRHVREQVLYRDLPIVVLSTEGQEKDIQQGLQLGANLYMVKPAQP 111
Query: 142 ----SDVKKLTG 149
+VK L G
Sbjct: 112 EKLLRNVKMLLG 123
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS + R ++ NLL+ V AE+G AL N LN N +NLV
Sbjct: 127 ILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIAL------------NILNKN-PDINLV 173
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
ITDY MP M G EL+K ++ + +K++P++V+SS + + I +C++ GA ++ KP
Sbjct: 174 ITDYEMPNMNGLELIKSVRNNHKLKDIPMIVISSVDAQSTIVDCMKHGANDYLHKPF 230
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 11 SSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN 70
S +P +L VDD V RK++ENLLK VT NG A +
Sbjct: 99 SEGEEYSPSKVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWD------------ 146
Query: 71 NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI-NECLEE 129
N++S K +LV+TD MP +TG++LL++I + + K +PV+++S + + N+ ++
Sbjct: 147 NISSGQQKYDLVLTDVMMPHITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKI 206
Query: 130 GAQMFMLKPLKPSDVKK 146
G Q F+ KP+ +KK
Sbjct: 207 GGQDFLTKPIAKELLKK 223
>gi|254283593|ref|ZP_04958561.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
gi|219679796|gb|EED36145.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
Length = 479
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 22/144 (15%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
V S+ + +S+ KPP +LAVDD +R+++ LL S V TAE+G AL
Sbjct: 102 VRSTVVAGASNTAKPPSADPTDAGVILAVDDMPENRELISRLLHRSGHTVITAESGEEAL 161
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSE 117
E LG + V++V+ D MPG+ G E+L+++K+ ++ PVV++S
Sbjct: 162 ELLGTM--------------AVDVVLLDLMMPGIGGAEVLRRLKDDPELRATPVVMISGR 207
Query: 118 NIPTRINECLEEGAQMFMLKPLKP 141
+I C++ GA ++LKP P
Sbjct: 208 QDMQQIIGCIQAGADDYLLKPFNP 231
>gi|374301471|ref|YP_005053110.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554407|gb|EGJ51451.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 123
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R +V ++K KVTTAE+G+ LE L SN ++L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLE------------KLYSNS--IDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G+ +K ++E K+ P+VV+S+E I + + GA ++++KP +P
Sbjct: 50 IISDVNMPRMDGFTFIKIVREQEAYKDTPIVVLSTEGQEKDIQQGMNLGANLYLVKPAQP 109
>gi|317153581|ref|YP_004121629.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
gi|316943832|gb|ADU62883.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
Length = 122
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R +V ++K KVTTAE+G+ LE L + +V+L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-------------YSAKEVDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G +K ++E +++P+VV+S+E I L GA ++M+KP +P
Sbjct: 51 IVSDVNMPRMDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQP 110
Query: 142 ----SDVKKLTG 149
+VK L G
Sbjct: 111 EKLVRNVKMLLG 122
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 16/135 (11%)
Query: 20 PPH----VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
PP+ VL V+D R +V LL+N +V A NG++A L+D++ ++
Sbjct: 37 PPYRQLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWS---LLDDRNRE------ 87
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
++LV+TD MPG++G LL KI ++VPVV++SS + + +CL +GA F+
Sbjct: 88 ---IDLVLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFL 144
Query: 136 LKPLKPSDVKKLTGH 150
+KP++ +++K L H
Sbjct: 145 VKPVRKNELKNLWQH 159
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P H+L VDD + R +V NLL+ + KVT A +GM ALE L GT
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEIL----------RGQPPGT 51
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+L++TD MP + G ELL+ ++ +PV+++S+ + EC+ GA+ ++LK
Sbjct: 52 -FSLILTDVMMPDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLK 110
Query: 138 PLKPSDVKKLTGHL 151
P+ +V+ + H+
Sbjct: 111 PVTKKEVQHMWQHV 124
>gi|46580478|ref|YP_011286.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120602202|ref|YP_966602.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387153775|ref|YP_005702711.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46449897|gb|AAS96546.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120562431|gb|ABM28175.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311234219|gb|ADP87073.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 122
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R +V ++K KVTTAE+G+ LE L +S G V+L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-----------YSSEG--VDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G+ +K ++E + +P+VV+S+E I + GA ++M+KP +P
Sbjct: 51 IISDVNMPRMDGFTFIKTVREQDTYRNLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQP 110
Query: 142 SDVKK 146
+ K
Sbjct: 111 EKMVK 115
>gi|242081263|ref|XP_002445400.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
gi|241941750|gb|EES14895.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
Length = 141
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P VL V++ VD + LL+ +V + ++ALE L N N V
Sbjct: 24 PWVLIVENCQVDYFVTSYLLRGHNVQVIAVQGPLQALELL----------NAEHN---VK 70
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++++Y MP MTGY+LL ++K+S + +PVV+ S + P + +CL+ GA+ +++KP+K
Sbjct: 71 LILSNYWMPNMTGYDLLMEMKKSPKLSHLPVVITSFDKSPEVVKKCLDGGAKDYIIKPIK 130
Query: 141 PSDVKKL 147
+DV ++
Sbjct: 131 HADVPRI 137
>gi|298529775|ref|ZP_07017178.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511211|gb|EFI35114.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 122
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R ++ ++K VTTAE+G+ ALE L + V+L
Sbjct: 4 HILMVDDSKTVRNLIAFIVKKEGFHVTTAEDGLDALEKL-------------YAASNVDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G+ ++ ++E ++VPV+++S+E + L GA ++M+KP +P
Sbjct: 51 IITDINMPRMDGFTFVQNLREQEAFRDVPVIILSTEGQEKDKEQGLSLGANLYMVKPAQP 110
Query: 142 ----SDVKKLTG 149
+VK L G
Sbjct: 111 EWLLKNVKMLLG 122
>gi|303326752|ref|ZP_07357194.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345890763|ref|ZP_08841627.1| hypothetical protein HMPREF1022_00287 [Desulfovibrio sp.
6_1_46AFAA]
gi|302862740|gb|EFL85672.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345048989|gb|EGW52809.1| hypothetical protein HMPREF1022_00287 [Desulfovibrio sp.
6_1_46AFAA]
Length = 122
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 17/134 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H++ VDDS R +V +LK+ KV+TAE+G+ A+E L ++ V
Sbjct: 2 PKHIMVVDDSKTIRNLVAFVLKSEGFKVSTAEDGLDAIEKLYSLE-------------PV 48
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+++D MP M G+ +K I+ K++P++V+S+E I + GA ++M+KP
Sbjct: 49 DLIVSDVNMPRMDGFTFIKTIRTQDAYKDIPIIVLSTEGQEQDIQTGMSLGANLYMVKPA 108
Query: 140 KP----SDVKKLTG 149
+P ++K L G
Sbjct: 109 QPEKMVRNIKMLLG 122
>gi|443318927|ref|ZP_21048168.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442781461|gb|ELR91560.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1123
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 16/139 (11%)
Query: 2 DACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
+A A + + SS P PH+L VDD+ R V ++L+ +V TA +G ALE
Sbjct: 752 EASEAAPPARAESSPGPDSPHILVVDDNADLRAYVSHVLQRQGYQVRTAHSGTMALEM-- 809
Query: 62 LVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSE-NIP 120
++ NL++TD MPGM+G EL++++++ ++ VPVV+++++ +
Sbjct: 810 ------------AHSQPPNLILTDLMMPGMSGLELIQQVRQDERLRTVPVVLLTAKVDDE 857
Query: 121 TRINECLEEGAQMFMLKPL 139
TRI E +E+GA ++ KP
Sbjct: 858 TRI-EGMEQGADAYLSKPF 875
>gi|87118378|ref|ZP_01074277.1| Response regulator receiver [Marinomonas sp. MED121]
gi|86166012|gb|EAQ67278.1| Response regulator receiver [Marinomonas sp. MED121]
Length = 301
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 12/119 (10%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PH+LAVDD ++ +I+E+ L +S +VT A++ +A ++L D Q +
Sbjct: 6 PHLLAVDDEEINLRILEHYLSDSDYQVTFAQSSNQAWDYLTNADYQ------------FD 53
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+++ D+ MP + G ELLKK KE K VP +++S + P+ I++ L GA ++ KPL
Sbjct: 54 VLLLDWVMPDVDGLELLKKAKELENYKHVPAIMISGLSAPSAISKGLNAGAFYYLTKPL 112
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 79/131 (60%), Gaps = 12/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+ R++V LL++ +V +AENG +A +L +++QNN +++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN-------IDI 128
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRK 188
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 189 NELKNLWQHVW 199
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 79/131 (60%), Gaps = 12/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+ R++V LL++ +V +AENG +A +L +++QNN +++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN-------IDI 128
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRK 188
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 189 NELKNLWQHVW 199
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 79/129 (61%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL+ +V +AENG +A +L ++++NN ++LV
Sbjct: 53 VLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYL-----EDKRNN-------IDLV 100
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + + +CL +GA F++KP++ +
Sbjct: 101 LTEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKN 160
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 161 ELKNLWQHV 169
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 79/131 (60%), Gaps = 12/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+ R++V LL++ +V +AENG +A +L +++QNN +++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN-------IDI 128
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRK 188
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 189 NELKNLWQHVW 199
>gi|220904650|ref|YP_002479962.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868949|gb|ACL49284.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 122
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H++ VDDS R +V +LK KV+TAE+G+ A+E L +D V+L
Sbjct: 4 HIMVVDDSKTIRNLVAFVLKGEGFKVSTAEDGLDAIEKLYSLDP-------------VDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G+ +K I+ K++P++V+S+E I + GA ++M+KP +P
Sbjct: 51 IVSDVNMPRMDGFTFIKTIRAQDAYKDIPIIVLSTEGQEKDIQTGMSLGANLYMVKPAQP 110
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 79/133 (59%), Gaps = 12/133 (9%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K +VL V+ R++V LL++ +V +AENG +A +L +++QNN
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN------- 125
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++ P
Sbjct: 126 IDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNP 185
Query: 139 LKPSDVKKLTGHL 151
++ +++K L H+
Sbjct: 186 IRKNELKNLWQHV 198
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 63 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 110
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 111 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 170
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 171 ELKNLWQHVW 180
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 10 SSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ 69
S S +P +L DD V RKI+ NLLK VT NG A E++
Sbjct: 149 SDFSDEYSPSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYI--------- 199
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI-NECLE 128
N K +LV+TD MP +TG++LL++I + V + +PV+++S + + N+ ++
Sbjct: 200 ---NKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIK 256
Query: 129 EGAQMFMLKPLKPSDVKK 146
G Q F+ KP+ +KK
Sbjct: 257 IGGQDFLTKPIAKELLKK 274
>gi|254513978|ref|ZP_05126039.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
gi|219676221|gb|EED32586.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
Length = 496
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 20/142 (14%)
Query: 6 VASSSSSSSSSNP------KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEF 59
++ +S+SS + P +P +LAVDD +R+++ L S V TA G ALE
Sbjct: 121 LSGASASSETIEPIPGLTGEPGFILAVDDREENRELLARYLTRSGHFVVTAPGGAEALEM 180
Query: 60 LGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
L D V++V+ D MPGM G E+L++IK ++ PV+++S E
Sbjct: 181 LANAD--------------VDVVLLDRMMPGMDGREVLRRIKAEPKLRATPVIMISGEQD 226
Query: 120 PTRINECLEEGAQMFMLKPLKP 141
I EC+E GA ++ KP P
Sbjct: 227 MQGIIECIEAGADDYLFKPFNP 248
>gi|119505208|ref|ZP_01627283.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
gi|119458899|gb|EAW39999.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
Length = 482
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 19/140 (13%)
Query: 7 ASSSSSSSSS-----NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
AS S++ + S + +P +LAVDD +R++V LL+ + V +AE+G ALE L
Sbjct: 109 ASESATPTKSVTLLPSEEPGVILAVDDLPENRELVSRLLQKTGHTVISAESGEEALELL- 167
Query: 62 LVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPT 121
+ V++V+ D MPG+ G E+LK++KE ++ PVV++S +
Sbjct: 168 -------------DTMGVDVVLLDLVMPGIGGAEVLKRLKEDERLRATPVVMISGQQDMD 214
Query: 122 RINECLEEGAQMFMLKPLKP 141
+I C+E GA ++LKP P
Sbjct: 215 QIVMCIEAGADDYLLKPFNP 234
>gi|78356619|ref|YP_388068.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78219024|gb|ABB38373.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 123
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS R +V ++K +VT AE+G+ LE L S V+L
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLE------------KLYSAEETVDL 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G+ +K ++E +++P+VV+S+E I + GA ++M+KP +P
Sbjct: 52 IISDVNMPRMDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQP 111
Query: 142 SDVKK 146
+ K
Sbjct: 112 DKMVK 116
>gi|386039129|ref|YP_005958083.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
gi|343095167|emb|CCC83376.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
Length = 1046
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG-TK 78
P VLAVDD V+ +++E LL + C V ++ AL+ L NG +
Sbjct: 712 PYRVLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL--------------NGRAR 757
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LVITD+ MP M+G L ++I+E + E+PV+++++ ++P I+ GA F+ KP
Sbjct: 758 FDLVITDWMMPEMSGIGLCRRIREGYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKP 817
Query: 139 LKPSDVKKLTGHLIN 153
+ ++K L+N
Sbjct: 818 VDAEELKARVRTLLN 832
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 111
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 112 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 172 ELKNLWQHVW 181
>gi|386829043|ref|ZP_10116150.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386429927|gb|EIJ43755.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 120
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 18/132 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDS D +V+N+L++ + + A NG ++ + K NL
Sbjct: 3 HILIVDDSPTDAYLVKNILESQGYQTSEASNGEEGIQ--------------KAKEIKPNL 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I D MPG+ G++ +KI +S K +PV++VSS+++ + L +GA+ F++KP+K
Sbjct: 49 IIMDVVMPGLNGFQATRKITKSEDTKSIPVIIVSSKDMESDRAWGLMQGAKEFLVKPVKQ 108
Query: 142 SD----VKKLTG 149
++ VKKL G
Sbjct: 109 AELLATVKKLIG 120
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 111
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 112 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 172 ELKNLWQHVW 181
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 111
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 112 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 172 ELKNLWQHVW 181
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 111
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 112 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 172 ELKNLWQHVW 181
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 76/129 (58%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +VT NG+ A +FL NL++N V++V
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFL---------ENLSNN---VDIV 126
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP +TG LL KI +K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 127 LTEVVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKN 186
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 187 ELKNLWQHV 195
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
PHVL +D + +IVE LLK +VT A NG AL+ L Q N+ + +
Sbjct: 13 PHVLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDIL-------QHNDKHC----FD 61
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TD MP + G +L+ ++ + V +PV+V+SSE I + GA +++KP++
Sbjct: 62 LILTDIMMPKVDGMDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIR 121
Query: 141 PSDVKKLTGHLIN 153
++V L H+
Sbjct: 122 KNEVATLWHHIWR 134
>gi|354581917|ref|ZP_09000820.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200534|gb|EHB65994.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1038
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
SS ++ S + PH+L VDD V+ +++E +L +T A +G AL L+D +E
Sbjct: 696 SSPTTLSGMSGYRPHLLIVDDDPVNLRVLEAILPTGEYDLTMATSGKEAL---ALLDRKE 752
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+LVITD MP M+GYEL ++I+E + E+P++++++ + P I
Sbjct: 753 W-----------DLVITDIMMPQMSGYELTRRIRERFTLTELPILLLTARSQPNDIQSGF 801
Query: 128 EEGAQMFMLKPLKPSDVK 145
GA ++ KP++ +++
Sbjct: 802 MAGANDYVTKPVEALEIR 819
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 78/131 (59%), Gaps = 12/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+ R++V LL++ +V +AENG +A +L +++QNN +++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN-------IDI 128
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++ P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRK 188
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 189 NELKNLWQHVW 199
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 78/131 (59%), Gaps = 12/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+ R++V LL++ +V +AENG +A +L +++QNN +++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN-------IDI 128
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++ P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRK 188
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 189 NELKNLWQHVW 199
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A +L ++ QNN ++LV
Sbjct: 85 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL-----EDLQNN-------IDLV 132
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++S+ + + + +CL +GA F++KPL+ +
Sbjct: 133 LTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKN 192
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 193 ELKNLWQHVW 202
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 78/131 (59%), Gaps = 12/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+ R++V LL++ +V +AENG +A +L +++QNN +++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL-----EDKQNN-------IDI 128
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ + MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++ P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRK 188
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 189 NELKNLWQHVW 199
>gi|253700815|ref|YP_003022004.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
gi|251775665|gb|ACT18246.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
Length = 452
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 13 SSSSNPKPPH-VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
+S++ PH +L VDDS K++E LL +V A NG ALE +
Sbjct: 3 TSNNGQTTPHLILIVDDSPTQAKLLEQLLAGEGYRVAVARNGSDALEQI----------- 51
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
N + ++VI+D MP M G+EL ++++E +KE P+V+++ N P+ + LE GA
Sbjct: 52 ---NERRPDMVISDILMPEMDGFELCRRVREMESIKETPIVLLTHLNDPSDVLHSLEAGA 108
Query: 132 QMFMLKP 138
F+ KP
Sbjct: 109 NYFVSKP 115
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+ +V +AENG+ A ++L ++ QN +++LV
Sbjct: 85 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL-----EDVQN-------RIDLV 132
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI S+ K +PV+++S + + + +CL +GA F++KP++ +
Sbjct: 133 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKN 192
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 193 ELKTLWQHIW 202
>gi|408419249|ref|YP_006760663.1| chemotaxis protein Y, response regulator CheY [Desulfobacula
toluolica Tol2]
gi|405106462|emb|CCK79959.1| CheY: chemotaxis protein Y, response regulator [Desulfobacula
toluolica Tol2]
Length = 141
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 17/128 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSA---CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
+L VDDS+ R +++ K + + A NG ALE + +N+ +
Sbjct: 5 ILIVDDSLPMRSVIKRTFKAAGYVNSEFHEAANGKDALELM--------KNDW------I 50
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++VITDY MP M G E +K IK+ ++K++PVVV+S+E T+I E ++ GA ++ KP
Sbjct: 51 DIVITDYNMPVMNGMEFIKTIKQDDLLKDIPVVVISTEGNETKIKEFMDCGAAGYITKPF 110
Query: 140 KPSDVKKL 147
P ++ L
Sbjct: 111 TPETIRDL 118
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A +L ++ QNN ++LV
Sbjct: 85 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL-----EDLQNN-------IDLV 132
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++S+ + + + +CL +GA F++KPL+ +
Sbjct: 133 LTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKN 192
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 193 ELKNLWQHVW 202
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 63 VLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 110
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 111 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 170
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 171 ELKNLWQHVW 180
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V +AENG+ A ++L ++ QN +++LV
Sbjct: 84 VLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYL-----EDLQN-------RIDLV 131
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++S + + +CL +GA F++KP++ +
Sbjct: 132 LTEVAMPCLSGISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKN 191
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 192 ELKNLWQHIW 201
>gi|357167771|ref|XP_003581325.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 81
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 13/81 (16%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P+V+AVDDS VDR ++ LL+ S KVT ++G RALE L + + N V+
Sbjct: 6 PYVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL------DSEPN-------VS 52
Query: 81 LVITDYCMPGMTGYELLKKIK 101
++ITDY MP MTGY LLKKIK
Sbjct: 53 MIITDYWMPEMTGYNLLKKIK 73
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 78/130 (60%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+IV LL++ +V AENG +A L Q+ Q+N ++LV
Sbjct: 25 LVETDDST--RQIVTALLRHCMYQVIPAENGDQAWARL-----QDMQDN-------IDLV 70
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+++ MPG++G LL+KI +V K++PV+++SS + + +CL GA F++KP++ +
Sbjct: 71 LSEVVMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKN 130
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 131 ELKNLWQHVW 140
>gi|374629884|ref|ZP_09702269.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoplanus limicola DSM 2279]
gi|373907997|gb|EHQ36101.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoplanus limicola DSM 2279]
Length = 442
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 14/134 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K +L V+DS + + +L+ C+V AE+G AL G + N K
Sbjct: 11 KSIKILVVEDSRTQAEFLRYILEEEGCRVMLAEDGREAL---GEI-----------NSYK 56
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
++V+TD MP + GYEL ++IK K++PV++V+ P + + LE GA F++KP
Sbjct: 57 PDIVLTDIVMPEIDGYELCRRIKSDDNTKDIPVILVTQLYDPADVIKGLESGADNFIIKP 116
Query: 139 LKPSDVKKLTGHLI 152
+ SD++K +++
Sbjct: 117 YEQSDIQKWITNIL 130
>gi|288573489|ref|ZP_06391846.1| response regulator receiver modulated diguanylate cyclase
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569230|gb|EFC90787.1| response regulator receiver modulated diguanylate cyclase
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 459
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P + V+DS+ K +E LL++ +VT A NG LE G V K
Sbjct: 12 PVIQIVEDSLTQAKRLERLLRSHGYEVTVARNGALGLEMAGKV--------------KPT 57
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+VITD MP M GYE+ +KIK+ +K++PVV+++S + P + + L+ GA F+ KP +
Sbjct: 58 VVITDVMMPEMDGYEMCRKIKDDPELKDIPVVILTSLSDPGDVIKGLQCGADNFLTKPYQ 117
Query: 141 PSDVKKLTGHLI 152
+ + H++
Sbjct: 118 DEHLLRRLQHIL 129
>gi|238011048|gb|ACR36559.1| unknown [Zea mays]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%)
Query: 88 MPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKL 147
MP MTGY+LLK IK S +PVVV+SSEN P RI+ CL GA+ F+LKPLK DV++L
Sbjct: 1 MPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRL 60
>gi|347731496|ref|ZP_08864592.1| response regulator [Desulfovibrio sp. A2]
gi|347519815|gb|EGY26964.1| response regulator [Desulfovibrio sp. A2]
Length = 117
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVI 83
+ VDDS R +V ++K KVTTAE+G+ LE L + KV+L+I
Sbjct: 1 MIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-------------YSSEKVDLII 47
Query: 84 TDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSD 143
+D MP M G+ +K ++E +++P+VV+S+E I + GA ++M+KP +P
Sbjct: 48 SDVNMPRMDGFTFIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQPEK 107
Query: 144 VKK 146
+ K
Sbjct: 108 MVK 110
>gi|345873065|ref|ZP_08824986.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii AZ1]
gi|343917643|gb|EGV28435.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii AZ1]
Length = 812
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
V S+ PP VL VDD+ + +++ L+ C+V TA +G++A+ +G
Sbjct: 674 VPSADVEGPVETGSPPRVLLVDDNDSNLEMISTYLRIKGCEVRTANSGLKAIAMVG---- 729
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
+ ++V+ D MP M G E ++++E ++ +P++ V++ +P +
Sbjct: 730 ----------EARPDIVLMDVQMPEMDGLETTRRLREDPALRLIPIIAVTALAMPGDREQ 779
Query: 126 CLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
CLE G ++ KPL +K+L G LIN
Sbjct: 780 CLEAGMDDYLSKPL---GLKELHGALIN 804
>gi|300311026|ref|YP_003775118.1| chemotaxis response regulator receiver domain-containing protein
[Herbaspirillum seropedicae SmR1]
gi|300073811|gb|ADJ63210.1| chemotaxis response regulator receiver domain protein
[Herbaspirillum seropedicae SmR1]
Length = 134
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
H L VDD R+I+ LLK KVT A++G A + L S ++
Sbjct: 6 HFLVVDDFSTMRRIIIGLLKELEYLKVTDADDGTSAWKIL------------ESGALPIS 53
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
VITD+ MPGM G LLKKI+E+ +K +PV++VS+E I E GA +++KP
Sbjct: 54 FVITDWNMPGMDGLGLLKKIRETPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPF 112
>gi|113476774|ref|YP_722835.1| response regulator receiver protein [Trichodesmium erythraeum
IMS101]
gi|110167822|gb|ABG52362.1| response regulator receiver protein [Trichodesmium erythraeum
IMS101]
Length = 121
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ LLKNS VT A +G+ AL L TK ++V
Sbjct: 4 VLVVEDSVTQREMISQLLKNSGLAVTVANDGVEALGRL--------------KNTKPDIV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ ++IK K +PVV+ SS+ L++GA ++ KP +P+
Sbjct: 50 VLDIVMPKMNGYEVCRRIKSDPQTKHIPVVMCSSKGEEFDRYWGLKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|436842876|ref|YP_007327254.1| Multi-sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432171782|emb|CCO25155.1| Multi-sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 826
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 14/117 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L V+DS+ +E L +++ A NG RAL G++ E++ ++L
Sbjct: 5 HILVVEDSLTQAVKLEFFLFERGFQISLASNGERAL---GILAEKD-----------IDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VI+D MPGM GYEL +KI+E+ K VPV++++S + P I + L+ GA F+ KP
Sbjct: 51 VISDVIMPGMDGYELCEKIRENPQYKSVPVILLTSLSDPGDIIKGLKSGATNFVTKP 107
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
S +S+ +L V+D+ ++ K+ +LK + A NG+ A+ L
Sbjct: 571 SQASDNSVFRILLVEDNPINVKVATCMLKKMGHVIEVAGNGVEAISTL------------ 618
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSV---MKEVPVVVVSSENIPTRINECLEE 129
+ V+L++ D MP M G+E + I+ K++P++ +S+ + ++C +
Sbjct: 619 --SKLTVDLILMDLEMPEMDGFEASRNIRMGMAGEDKKDIPIIAMSAHAMAGVKDKCSKS 676
Query: 130 GAQMFMLKPLKPSDVKKL 147
G ++ KP++ +D+K++
Sbjct: 677 GMNNYIAKPVQYADLKQV 694
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P H+L VDD I RK+++NLL VT + +E N L T
Sbjct: 142 PSSIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSA------------EEAWNMLIYGTT 189
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI-NECLEEGAQMFML 136
K +LV+TD MP +TG++LL++I E +K +PV+++S + + N+ ++ G Q F+
Sbjct: 190 KFDLVLTDVMMPQVTGFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKIGGQDFVT 249
Query: 137 KPLKPSDVKK 146
KP+ +KK
Sbjct: 250 KPIAKELLKK 259
>gi|389579963|ref|ZP_10169990.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389401598|gb|EIM63820.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 141
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSA---CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
+L VDDS+ R +++ L + ++ A NG AL L G V
Sbjct: 5 ILIVDDSMPMRTVLKRSLAAAGYGGSRILEASNGKEALTVL--------------KGEWV 50
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L++TDY MP M G LK +K ++ KE+PV+V+S+E ++I E ++ GA ++ KP
Sbjct: 51 DLIMTDYNMPEMNGLSFLKTVKTEALFKEIPVIVISTEGNDSKIKEFIDTGAAGYITKPF 110
Query: 140 KPSDVKKLTGHLIN 153
P ++ L +I
Sbjct: 111 TPEALRDLIVSIIG 124
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD R +V LL+N +VT NG++A + L G +++LV
Sbjct: 88 VLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL------------EDPGNRIDLV 135
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI +K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 136 LTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRN 195
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 196 ELKNLWQHV 204
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD R +V LL+N +VT NG++A + L G +++LV
Sbjct: 76 VLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL------------EDPGNRIDLV 123
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI +K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 124 LTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRN 183
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 184 ELKNLWQHV 192
>gi|411119422|ref|ZP_11391802.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoriales cyanobacterium
JSC-12]
gi|410711285|gb|EKQ68792.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoriales cyanobacterium
JSC-12]
Length = 121
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++++LLK S VT A +G+ ALE + G++ +LV
Sbjct: 4 VLVVEDSVTQREMIKDLLKGSGLDVTVASDGVEALEQI--------------QGSRPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKADPKTQSVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DVKKLTGHLIN 153
++ L+
Sbjct: 110 ELVGTVKQLLR 120
>gi|357471533|ref|XP_003606051.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355507106|gb|AES88248.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 153
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 43/51 (84%)
Query: 102 ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
ES+ +K++PVV++SSEN+P+RIN CLEEGA+ F LKP++ SDV KL HL+
Sbjct: 77 ESNSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLL 127
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N +VT AENG++A + L T V+LV
Sbjct: 100 VLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKIL------------EDYTTHVDLV 147
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI K +PV+++SS + + +CL +GA F+ KP++ +
Sbjct: 148 LTEVVMPCLSGIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKN 207
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 208 ELKNLWQHVW 217
>gi|397691109|ref|YP_006528363.1| response regulator receiver protein [Melioribacter roseus P3M]
gi|395812601|gb|AFN75350.1| response regulator receiver protein [Melioribacter roseus P3M]
Length = 121
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L DDS RK V L ++ +GM ALE L G K++L+
Sbjct: 5 ILVADDSPTIRKFVSVALSTKGYEIIACADGMEALEKL--------------PGNKIDLL 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP + G++L+K I+E+ KE+P++V+SS I+ LE GA +++KP P
Sbjct: 51 ITDLNMPNIDGFQLIKSIRENEEYKELPIIVLSSLGSSEDIHRGLEYGANSYLIKPFDPK 110
Query: 143 DV 144
V
Sbjct: 111 RV 112
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+D R +V LL+N +VT A +G++A E L + + V+LV
Sbjct: 111 VLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEIL------------ETRSSSVDLV 158
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP ++G ELL KI K +PVV++S + + +CL +GA F++KP++ +
Sbjct: 159 LTDLMMPRLSGIELLGKIMSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKN 218
Query: 143 DVKKLTGHLI 152
++K L H
Sbjct: 219 ELKNLWQHFW 228
>gi|427724437|ref|YP_007071714.1| response regulator receiver protein [Leptolyngbya sp. PCC 7376]
gi|427356157|gb|AFY38880.1| response regulator receiver protein [Leptolyngbya sp. PCC 7376]
Length = 121
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L V+DSI R+++ LLK S KV A +G+ ALE N + +L
Sbjct: 3 KILVVEDSISQREMISELLKGSGLKVEVAGDGVEALE--------------NLKQFQPDL 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++ D MP M GYEL +KIK K+VPVV+ SS+ +++GA ++ KP +P
Sbjct: 49 IVLDIVMPRMNGYELCRKIKSDPKTKDVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQP 108
Query: 142 SDV 144
+++
Sbjct: 109 AEL 111
>gi|254443113|ref|ZP_05056589.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198257421|gb|EDY81729.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 601
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+PP VL V+D +V++K+V LLK K +NG +A+E L
Sbjct: 470 QPPEVLVVEDDLVNQKVVTALLKKLGAKTVCVDNGKKAVEIL--------------RPGA 515
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LV+ D MP M G E ++I+++ +K++P+V +++ + C E G F+ KP
Sbjct: 516 FDLVLMDISMPVMDGIEATEEIRKNDALKDLPIVALTAHSYSKSEKACFEAGMNGFLTKP 575
Query: 139 LKPSDVKKLTGHLI 152
K + ++ LI
Sbjct: 576 AKADQLFEIISKLI 589
>gi|443315090|ref|ZP_21044601.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442785303|gb|ELR95132.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 122
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ LL+ S VT A +G+ ALE + +G +LV
Sbjct: 4 VLVVEDSIPQREMITELLRGSGLDVTAASDGVEALEHI-------------QSGHPPDLV 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K ++VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 51 VLDIVMPRMNGYELCRRLKADPSTQDVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 110
Query: 143 DV 144
++
Sbjct: 111 EL 112
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P H+L VDD IV R ++ N+LK VT NG +E + L +
Sbjct: 165 PSKVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNG------------EEAWDTLLNGKV 212
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI-NECLEEGAQMFML 136
+LV+TD MP +TG++LL++I E +K +PV+++S + + N+ ++ G Q F+
Sbjct: 213 MYDLVLTDVMMPMVTGFDLLQRINEHIEIKHIPVILMSGTAVDYKYANDTIKIGGQDFLT 272
Query: 137 KPLKPSDVKK 146
KP+ +KK
Sbjct: 273 KPIAKELLKK 282
>gi|242278764|ref|YP_002990893.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
gi|242121658|gb|ACS79354.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
Length = 822
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L V+DS+ +E +L KV+ NG AL+ L V+L
Sbjct: 5 HILVVEDSLTQAVKLEYILFEKGFKVSLVSNGENALQLL--------------EDKDVDL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VI+D MPGM GYEL +KI+++S K+VPV++++S + P I + L+ GA F+ KP
Sbjct: 51 VISDVVMPGMDGYELCEKIRKNSRYKDVPVILLTSLSEPGDIIKGLKSGATNFVTKP 107
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L V+D+ ++ + +LL+ V A NG+ A+ L +G V+LV
Sbjct: 579 ILLVEDNPINVLVATSLLEKMGHSVEVASNGLEAVSML--------------SGIDVDLV 624
Query: 83 ITDYCMPGMTGYEL---LKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M G+ +++ + + VP++ +++ + ++C + G ++ KP+
Sbjct: 625 LMDLEMPEMDGFSASMSIRRGRAGDAARNVPIIAMTAHAMTGVKDKCAKAGMNDYIAKPV 684
Query: 140 KPSDVK 145
+ D++
Sbjct: 685 QYVDLR 690
>gi|354581874|ref|ZP_09000777.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200491|gb|EHB65951.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1056
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
S N +LAVDD V+ K++ +L + +TTA +G+ LE LG+
Sbjct: 714 SLGNDGKASILAVDDDPVNLKVLLGILSSEPYHITTAVSGLEVLELLGM----------- 762
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
+L+I D MP M+GYEL ++++E + E+P++++++ + P I GA
Sbjct: 763 ---RTWDLLIADVMMPQMSGYELTQRVREHYSVAELPILLLTARSQPEDIYTGFASGAND 819
Query: 134 FMLKPLKPSDVK 145
+M KP+ +++K
Sbjct: 820 YMTKPVDATELK 831
>gi|334136457|ref|ZP_08509922.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333605985|gb|EGL17334.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1066
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K P +L VDD V+ ++ NLL + +V TA +G AL L +G
Sbjct: 715 KRPSILVVDDDPVNLTVLRNLLASEGYRVETAASGREALSLL--------------DGNG 760
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LVI+D MP M+GYEL I+ + E+PV+++++ + P I GA ++ KP
Sbjct: 761 WDLVISDVMMPLMSGYELTWTIRGRHTLAELPVLLLTARSSPQDITAGFLAGANDYVTKP 820
Query: 139 LKPSDVKKLTGHLI 152
L D+K LI
Sbjct: 821 LGAYDLKARVRSLI 834
>gi|119774648|ref|YP_927388.1| response regulator receiver protein [Shewanella amazonensis SB2B]
gi|119767148|gb|ABL99718.1| response regulator receiver modulated diguanylate cyclase
[Shewanella amazonensis SB2B]
Length = 416
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
++ + + VL DDS + RK V NLL+ +V AENG RALE L V
Sbjct: 114 ATLARNRHTKVLVADDSALSRKFVRNLLELHLFEVIEAENGARALELLDAV--------- 164
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
+ + L+I DY MPG+ G+EL+ + +E +E+ ++ +S++ T ++ GA
Sbjct: 165 ----SGIRLLIADYNMPGIDGFELILRAREKFSREEMAIIGLSNDTDETLTARFIKNGAN 220
Query: 133 MFMLKPL 139
F+ KP
Sbjct: 221 DFLQKPF 227
>gi|443474636|ref|ZP_21064608.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
gi|443020622|gb|ELS34562.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
Length = 122
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++E+LLK S V TA +G+ ALE + G+ ++V
Sbjct: 4 VLVVEDSVTQREMIEDLLKGSGLNVKTAGDGVEALEQM--------------QGSCPDIV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL ++IK + VPVV+ SS+ +++GA ++ KP +P
Sbjct: 50 VMDIVMPRMNGYELCRRIKTDPKTERVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPQ 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|114776750|ref|ZP_01451793.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
gi|114552836|gb|EAU55267.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
Length = 841
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
KP H+L +D+ V++++++ +LK + V AE+G +AL+ L + T+
Sbjct: 582 KPLHILLAEDNAVNQEVMQEVLKKAGHNVQLAEDGEQALDAL-------------AGDTQ 628
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LV+ D MP +G ++LK+ + + PV+++S++ +P I EC++ GA ++ KP
Sbjct: 629 FDLVLLDMNMPKASGLDVLKQFRFMDTTGKTPVLMLSADALPDTIRECMDAGANDYLTKP 688
Query: 139 LK 140
++
Sbjct: 689 VQ 690
>gi|117925131|ref|YP_865748.1| chemotaxis protein CheA [Magnetococcus marinus MC-1]
gi|117608887|gb|ABK44342.1| CheA signal transduction histidine kinases [Magnetococcus marinus
MC-1]
Length = 878
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 11 SSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN 70
+ +S + PK PH+L VDDSI R + +N+L+ VTTA NG + E L QE Q
Sbjct: 746 AGTSINRPKVPHILVVDDSITTRTLEKNILEAKGFLVTTAVNGQKGWETL-----QEGQ- 799
Query: 71 NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
+LVI+D MP M G+E + I++ S ++PV++VSS + +E G
Sbjct: 800 --------FDLVISDVEMPIMNGFEFARTIRDDSRYDDLPVIIVSSLDSQENKRRGMEAG 851
Query: 131 AQMFMLK 137
A +++K
Sbjct: 852 ADAYIVK 858
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+D R +V LL+N + KVT NG++A + L ++ +N ++LV
Sbjct: 75 VLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVL-----EDPENG-------IDLV 122
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI +K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 123 LTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRN 182
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 183 ELKNLWQHV 191
>gi|88706905|ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
gi|88698827|gb|EAQ95947.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
Length = 495
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P +LAVDD +R ++ L S V TA +G ALE L D V
Sbjct: 140 PGFILAVDDREENRALLARYLTRSGHFVVTAPSGEEALEMLANAD--------------V 185
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++V+ D MPGM G E+L++IK ++ PV+++S E I EC++ GA ++ KP
Sbjct: 186 DVVLLDRMMPGMDGREVLRRIKAEPRLRATPVIMISGEQDMQGIIECIKAGADDYLFKPF 245
Query: 140 KP 141
P
Sbjct: 246 NP 247
>gi|339498727|ref|YP_004696762.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
gi|338833076|gb|AEJ18254.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
Length = 242
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L V+DS V ++ +L+ + + AE+G+ ALE L Q+ + + L
Sbjct: 8 HILIVEDSYVQAAGLQKILEQAGYSIVRAEHGLEALELL-------QKEHFD-------L 53
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
VI+D MP M GY L K IK + + K +PV++V+S + P I +E GA F+ KP K
Sbjct: 54 VISDVMMPKMDGYTLCKTIKTNELYKHLPVILVTSLSEPADIIRGIESGADSFIPKPYK 112
>gi|337285567|ref|YP_004625040.1| response regulator receiver protein [Thermodesulfatator indicus DSM
15286]
gi|335358395|gb|AEH44076.1| response regulator receiver protein [Thermodesulfatator indicus DSM
15286]
Length = 125
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 14/133 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
VL VDD R+I++N+L K + A++G A E L + G KV+
Sbjct: 6 KVLVVDDFATMRRIIKNILLQLGFKNIIEADDGTTAWEIL-------------NKGEKVD 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+I+D+ MP MTG ELLKK++ K++P ++V++E I E ++ +++KP
Sbjct: 53 LIISDWNMPKMTGIELLKKVRSDDRFKDIPFLMVTAEAQKENIIEAVKYKVSQYIVKPFT 112
Query: 141 PSDVKKLTGHLIN 153
P +++ + N
Sbjct: 113 PETLQEKLKKIFN 125
>gi|422910310|ref|ZP_16944950.1| response regulator [Vibrio cholerae HE-09]
gi|424660141|ref|ZP_18097389.1| response regulator [Vibrio cholerae HE-16]
gi|341633631|gb|EGS58427.1| response regulator [Vibrio cholerae HE-09]
gi|408051048|gb|EKG86166.1| response regulator [Vibrio cholerae HE-16]
Length = 119
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + LK++ +V TA +G AL+ + ++ +++
Sbjct: 4 VLAVDDSISIRQMVSHTLKDAGYEVETAADGREALD--------------KAQKSRFDVI 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP MTG+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 50 ISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 109
Query: 143 DVKK 146
+ K
Sbjct: 110 TLLK 113
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 13/124 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD V R+++ LL+ +V E G +ALE L +E+ NN +L+
Sbjct: 92 VLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVL-----REEGNN-------YHLL 139
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G +LLK +++ +++P+++VSS P IN+C + GA+ F+ KP++
Sbjct: 140 LVDVLMPDMDGLQLLKIFRQA-YSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLE 198
Query: 143 DVKK 146
+K+
Sbjct: 199 ILKR 202
>gi|413924848|gb|AFW64780.1| hypothetical protein ZEAMMB73_536209 [Zea mays]
Length = 122
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 91 MTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN--ECLEEGAQMFMLKPLKPSDVKKLT 148
M GY+LL+K+K+SS ++++PVV++SSEN P+RIN CLEEGA LKP++ SD+ +
Sbjct: 1 MPGYDLLRKVKDSSSLRDIPVVIMSSENNPSRINRTRCLEEGADESFLKPVRLSDMSNIK 60
Query: 149 GHLI 152
H++
Sbjct: 61 LHIL 64
>gi|291288614|ref|YP_003505430.1| response regulator receiver protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885774|gb|ADD69474.1| response regulator receiver protein [Denitrovibrio acetiphilus DSM
12809]
Length = 121
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 17/131 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD+I R++V LK S V A +G+ AL+ L++ G + NL+
Sbjct: 4 ILIVDDAITMRQLVAATLKASGYDVVDARDGVDALK------------KLDAEG-RFNLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
++D MP M G LK++K SS K PV+++++E+ E + GA+ +++KP KP+
Sbjct: 51 VSDVNMPNMDGITFLKEVKASSKHKFTPVIMLTTESQAGIKEEGRKAGAKAWIVKPFKPN 110
Query: 143 D----VKKLTG 149
D VKK+ G
Sbjct: 111 DLLAVVKKIIG 121
>gi|338212839|ref|YP_004656894.1| response regulator receiver protein [Runella slithyformis DSM
19594]
gi|336306660|gb|AEI49762.1| response regulator receiver protein [Runella slithyformis DSM
19594]
Length = 126
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 16/125 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL V+D RK++ LKN +VTT NG+ A+ +L EQ G V++
Sbjct: 6 NVLIVEDDAFIRKVLRQSLKND-FEVTTHINGIEAMSWL------EQ-------GNPVDV 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS-ENIPTRINECLEEGAQMFMLKPLK 140
V+TD MP + G +L++ I+ S + K +P++++S+ ++ TRI CLE GA FM KP
Sbjct: 52 VLTDLQMPYLNGQDLIRTIRASPMFKNLPIIILSTFDDSNTRI-ACLELGADDFMTKPFN 110
Query: 141 PSDVK 145
P +VK
Sbjct: 111 PLEVK 115
>gi|357450665|ref|XP_003595609.1| Two-component response regulator ARR17 [Medicago truncatula]
gi|355484657|gb|AES65860.1| Two-component response regulator ARR17 [Medicago truncatula]
Length = 125
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
+ SSS N PHVLAVDD+I+DR +VE LKNS+CKVTTAEN ++ALE++G ++
Sbjct: 36 ASDSSSKWMMENGDIPHVLAVDDNIIDRTLVEKHLKNSSCKVTTAENRLKALEYIGYMN 94
>gi|359689801|ref|ZP_09259802.1| chemotaxis response regulator CheY [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749227|ref|ZP_13305519.1| response regulator receiver domain protein [Leptospira licerasiae
str. MMD4847]
gi|418757488|ref|ZP_13313675.1| response regulator receiver domain protein [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384115265|gb|EIE01523.1| response regulator receiver domain protein [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404276296|gb|EJZ43610.1| response regulator receiver domain protein [Leptospira licerasiae
str. MMD4847]
Length = 120
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS V RKI+ L ++ V AE+G++ LE L KV+LV
Sbjct: 4 ILIVDDSAVFRKILTLHLSQASFSVIEAEDGLQGLEKL--------------KEGKVDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
++D MP M G +K IKE S K VP++++++E+ NE L+ GA+ ++ KP P
Sbjct: 50 VSDMNMPNMNGISFVKAIKEDSNHKFVPIIMLTTESQDELKNEGLKAGAKAWLTKPFSPE 109
Query: 143 DVKK 146
++ K
Sbjct: 110 ELLK 113
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 14/129 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ +DDS R +V LL+N + +V A NG++A + L E N ++LV
Sbjct: 83 LVEIDDST--RHVVTALLRNCSYEVIEAANGLQAWKIL------EDLTN------HIDLV 128
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL KI K +PVV++SS + + +CL +GA F++KP++ +
Sbjct: 129 LTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 188
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 189 ELKNLWQHV 197
>gi|358455253|ref|ZP_09165481.1| transcriptional regulator, SARP family [Frankia sp. CN3]
gi|357081506|gb|EHI90937.1| transcriptional regulator, SARP family [Frankia sp. CN3]
Length = 459
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
Query: 3 ACGVASSSSSSSSSNP--------KPP------HVLAVDDSIVDRKIVENLLKNSACKVT 48
A +++ S+S+S++P +PP VL VDD+ ++R+++ + + +V
Sbjct: 269 ATSTSTAMSASASTSPAEVATPDHEPPPADRRGRVLVVDDTAINRRLLASAVAQLGHEVE 328
Query: 49 TAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKE 108
TAENG RALE L D+ + G ++V+ D MP + GY L +IK V+ +
Sbjct: 329 TAENGHRALEMLRAADD-------DPRG--FDIVLLDLLMPVLDGYATLAEIKADPVLAD 379
Query: 109 VPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VPV++VS+ + C+E GA ++ KP
Sbjct: 380 VPVIMVSAVPELESVVRCIELGAIDYLPKP 409
>gi|404495358|ref|YP_006719464.1| response receiver [Geobacter metallireducens GS-15]
gi|418065548|ref|ZP_12702920.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
gi|78192977|gb|ABB30744.1| response receiver [Geobacter metallireducens GS-15]
gi|373561933|gb|EHP88155.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
Length = 141
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 33 RKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMT 92
R I +NL+K++ ++ + G RALE+ E + +L + LV+ D MPG+
Sbjct: 22 RLITKNLMKSADVEILPFDTGRRALEYF----EGKTAEDLRQH-----LVVLDINMPGID 72
Query: 93 GYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
G+E+LK++K + VPV+V ++ + P I C EGA ++++KP+
Sbjct: 73 GFEVLKRLKGNEATAAVPVIVFTTTDHPDEIRRCYHEGANLYLVKPM 119
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A +L ++ QNN ++LV
Sbjct: 84 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL-----EDLQNN-------IDLV 131
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ M ++G LL KI + K++PV+++S+ + + + +CL +GA F++KPL+ +
Sbjct: 132 LTEVFMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKN 191
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 192 ELKNLWQHVW 201
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|333907842|ref|YP_004481428.1| response regulator receiver protein [Marinomonas posidonica
IVIA-Po-181]
gi|333477848|gb|AEF54509.1| response regulator receiver protein [Marinomonas posidonica
IVIA-Po-181]
Length = 265
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSN 75
+PK VL DDS++ RK V L + + AENG A+E L N
Sbjct: 142 DPKSLRVLVTDDSLMARKHVSKTLNTMGIEDIEFAENGREAIERL--------------N 187
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
++ +L++TDY MP M G EL + ++++ + +P+++VSS + ++++ +EG
Sbjct: 188 ESEFDLIVTDYNMPEMDGRELTEAVRQNPEIAHIPILMVSSNSEDSQLSNITQEGVDAVC 247
Query: 136 LKPLKPSDVKKLTGHLIN 153
KP +P+ V++L ++N
Sbjct: 248 GKPFEPNTVRQLLAQILN 265
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|428311538|ref|YP_007122515.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
gi|428253150|gb|AFZ19109.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
Length = 1099
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD V+ +++ N L +T A NGM ALE L+D G K +L
Sbjct: 694 QILIVDDEPVNLQVLVNHLSLQNYAITQAANGMEALE---LIDR----------GFKPDL 740
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP-LK 140
++ D MP MTGYEL +KI+E E+PVV+++++N + + E GA ++ KP LK
Sbjct: 741 ILLDIMMPKMTGYELCQKIRERFPANELPVVLLTAKNQVSDLVEGFSAGANDYLTKPVLK 800
Query: 141 PSDVKKLTGHL 151
+ ++ H+
Sbjct: 801 NELLARIKTHI 811
>gi|284035948|ref|YP_003385878.1| response regulator receiver protein [Spirosoma linguale DSM 74]
gi|283815241|gb|ADB37079.1| response regulator receiver protein [Spirosoma linguale DSM 74]
Length = 141
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD + RKIV+ L NS K+ + NG+ A+ +L NG ++
Sbjct: 6 QILHVDDDLYMRKIVQ-LTLNSEFKLDSCTNGIEAMNWL-------------ENGNIPDI 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP + G EL++ I++++ K +P++++SS C++EGA F+ KP P
Sbjct: 52 IITDLLMPQLNGQELIQLIRKNATYKNIPIIILSSLEDGVTKASCIQEGADDFISKPFNP 111
Query: 142 SDV 144
++
Sbjct: 112 REI 114
>gi|392940748|ref|ZP_10306392.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Thermoanaerobacter siderophilus SR4]
gi|392292498|gb|EIW00942.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Thermoanaerobacter siderophilus SR4]
Length = 123
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P VL VDDS R ++L+N +V A NG ALE K +
Sbjct: 3 PSVLIVDDSAAVRGFHGSILRNVGFEVEEAANGYEALE--------------KYLAKKFD 48
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++ D MP M GYEL+++I+E + VPV+V+S+E+ E GA +++ KP+
Sbjct: 49 LLLVDVNMPKMHGYELVRQIREQELHGFVPVIVISTESAENDYLEAFRVGANLYLEKPVD 108
Query: 141 PS----DVKKLTG 149
P K LTG
Sbjct: 109 PICLQLSAKMLTG 121
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS N + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|168069753|ref|XP_001786566.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660993|gb|EDQ48622.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD V+ +++ NLL ++ TA NG ALE + +G ++LV
Sbjct: 402 VLMVDDDPVNLQVLRNLLALEGYRLMTASNGQEALEKI-------------QSGQSIDLV 448
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D+ MPGM+G +L + ++ + +P++++++ ++P + L GA F+ KP+
Sbjct: 449 IADWMMPGMSGLDLCRSVRRQFSLSALPILLLTARSLPEDVRIGLSAGANDFLRKPVDAE 508
Query: 143 DVK 145
+++
Sbjct: 509 ELR 511
>gi|335042247|ref|ZP_08535274.1| response regulator consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain containing protein
[Methylophaga aminisulfidivorans MP]
gi|333788861|gb|EGL54743.1| response regulator consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain containing protein
[Methylophaga aminisulfidivorans MP]
Length = 120
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 18/132 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++LAVDDS R++V L+ + KVT A++G +AL+ Q+Q +L
Sbjct: 3 NILAVDDSASMRQMVTFTLQGAGHKVTVADDGKQALDI-----AQKQ---------SFDL 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITD MP M G L +++++ S K +P++V+++E P + E GA +++KP P
Sbjct: 49 VITDVNMPVMDGLTLTRQLRQLSTFKFIPILVLTTEAGPEKKQEGRAAGATGWLIKPFNP 108
Query: 142 ----SDVKKLTG 149
+ VKK+ G
Sbjct: 109 EQLLATVKKVLG 120
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +VT NG+ A + L NL++N V++V
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVL---------ENLSNN---VDIV 126
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI +K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 127 LTEVVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKN 186
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 187 ELKNLWQHV 195
>gi|452852724|ref|YP_007494408.1| Response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio piezophilus]
gi|451896378|emb|CCH49257.1| Response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio piezophilus]
Length = 478
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R +E+ LK V TA NG ALE L D NLV
Sbjct: 143 ILVVDDSASVRLFLESGLKEEGFIVETATNGREALERLPDFDP--------------NLV 188
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
ITD MP M G EL + IK+S V VPVV++SS + + + EGA F++KP
Sbjct: 189 ITDLMMPEMDGAELCRAIKQSEVHNSVPVVIMSSLSDKPLMRRLMREGAATFLIKPF 245
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
++ ++++ PPH+L VDDS R +E L + VT A NG AL
Sbjct: 2 TTHTTNAPEGASPPHILVVDDSHSVRYALEKHLMEAGFSVTLAVNGEDALS--------- 52
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+ +LVITD MP M GYEL K++K +P++V+SS + + E
Sbjct: 53 -----KAVDGSFDLVITDIDMPKMDGYELCKRLKNEFKTSHIPIIVLSSRDSDDHVEEGF 107
Query: 128 EEGAQMFMLK 137
GA ++ K
Sbjct: 108 RVGADAYLAK 117
>gi|428221835|ref|YP_007106005.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 7502]
gi|427995175|gb|AFY73870.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 7502]
Length = 123
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS R+++ +LLKNS VT+A +G+ ALE Q QQ+ ++V
Sbjct: 4 VLVVEDSPPQREMISSLLKNSGLNVTSASDGVEALE-------QIQQDC-------PDIV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K++ KE+PVV+ S++ L +GA ++ KP +P
Sbjct: 50 VLDIVMPRMNGYELCRRLKDNPKTKELPVVMCSTKGEEFDRYWGLRQGANAYIAKPFQPQ 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|443318409|ref|ZP_21047662.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442781999|gb|ELR92086.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 1182
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S++ S + + + +L VDD V+R+++ N L + +VT A NG AL L
Sbjct: 772 SNNGDSDAIDARQFLILVVDDEPVNRQVIVNHLSVHSYRVTQASNGPEALAML------- 824
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
SNG +L++ D MP MTGYE+ ++++E +P+V+++++N + E L
Sbjct: 825 ------SNGLLPDLILLDVMMPRMTGYEVCRQVREQHPAYALPIVMLTAKNQVADLVEGL 878
Query: 128 EEGAQMFMLKPLKPSD-VKKLTGHL 151
GA ++ KP+ + + +L HL
Sbjct: 879 SAGANDYLTKPVSKGELLARLNTHL 903
>gi|170727199|ref|YP_001761225.1| response regulator receiver modulated diguanylate cyclase
[Shewanella woodyi ATCC 51908]
gi|169812546|gb|ACA87130.1| response regulator receiver modulated diguanylate cyclase
[Shewanella woodyi ATCC 51908]
Length = 415
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL DDS+V RK V +LL+ +V A++G+ ALE L + + L+
Sbjct: 124 VLVADDSMVSRKFVRSLLEQQLFQVIEADDGLSALEIL-------------KSQPDITLL 170
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
ITDY MPG+ G+ L+ K++ES +E+ ++ +SS++ + ++ GA F+ KP
Sbjct: 171 ITDYNMPGLDGFGLILKVRESFTREELAIIGLSSDDDESLSARFIKNGANDFLQKPF 227
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 76/137 (55%), Gaps = 14/137 (10%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
S+ + H+L VDD +V++++++N L + ++T +G AL+ L +
Sbjct: 1193 SDSEKVHILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVL-------------DD 1239
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
++LV+ D MP M+GYE+ +KI+E + E+PV++++++N + + L GA ++
Sbjct: 1240 DDTIDLVLLDVMMPRMSGYEVCQKIREKHLPSELPVLMITAKNQVSDLVTGLNTGANDYI 1299
Query: 136 LKPLKPSD-VKKLTGHL 151
KP + + +L HL
Sbjct: 1300 AKPFSKDEFLARLNMHL 1316
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|85859036|ref|YP_461238.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722127|gb|ABC77070.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 145
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTT---AENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+V+ VDDS R ++ ++ S K+ A NG A+ L +SN
Sbjct: 6 NVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGKEAMTLL------------DSN--W 51
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V+++++D MP M G ELL ++K+ + KE+PV+++++E R+ E GA+ F+ KP
Sbjct: 52 VDVILSDINMPEMNGLELLSRLKQDDLFKEIPVIMITTEGSSPRMEEAFRYGAKGFIKKP 111
Query: 139 LKPSDVKKL 147
P D+KK+
Sbjct: 112 FLPGDLKKV 120
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|329928021|ref|ZP_08282025.1| response regulator receiver domain protein [Paenibacillus sp. HGF5]
gi|328938125|gb|EGG34522.1| response regulator receiver domain protein [Paenibacillus sp. HGF5]
Length = 329
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 71/123 (57%), Gaps = 13/123 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD V+ +++ +LL + +A NG +ALE + +G ++LV
Sbjct: 1 MLLVDDDPVNLQVLRSLLSAENYHLISAGNGAQALEHI-------------RSGQGIDLV 47
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD+ MPGM+G +L +++ + E+P++++++ ++P + L+ GA F+ KP++
Sbjct: 48 ITDWMMPGMSGLQLCMTVRQQFTLFELPMLMLTARSLPDDVRTGLQAGANDFLRKPVEAD 107
Query: 143 DVK 145
+++
Sbjct: 108 ELR 110
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+D R +V LL+N + +VT NG++A + L ++ +N ++LV
Sbjct: 92 VLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVL-----EDPENG-------IDLV 139
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI +K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 140 LTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRN 199
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 200 ELKNLWQHVW 209
>gi|428769009|ref|YP_007160799.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
gi|428683288|gb|AFZ52755.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
Length = 130
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD+ R+++ LK +VT A NG+ A + + E+E K NLV
Sbjct: 10 ILVVDDNHTPREVISEALKQFNIQVTEASNGVEATKII----EKE----------KFNLV 55
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP M GYEL + IK + ++VPV++ S++ I+ ++GA +++KP K
Sbjct: 56 ITDVVMPEMNGYELCRWIKSNPGTEKVPVIICSTKGEEFDIHWATKQGADAYIIKPFKTM 115
Query: 143 DVKKLTGHLI 152
++ K +L+
Sbjct: 116 ELLKTIKYLL 125
>gi|170077988|ref|YP_001734626.1| two-component system response regulator [Synechococcus sp. PCC
7002]
gi|169885657|gb|ACA99370.1| two-component system response regulator [Synechococcus sp. PCC
7002]
Length = 131
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L V+DS+ R+++ LLK + V A +G+ ALE L Q N+ T NL
Sbjct: 3 RILVVEDSLSQREMISELLKGNGLTVDVAGDGLEALETL-------SQMAKNAAETLPNL 55
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++ D MP M GYEL +++K ++ +P+V+ SS+ +++GA ++ KP +P
Sbjct: 56 IVLDIVMPRMNGYELCRRLKSDPKIQNIPIVMCSSKGEEFDRYWGMKQGADAYIAKPFQP 115
Query: 142 SDV 144
+++
Sbjct: 116 AEL 118
>gi|443324752|ref|ZP_21053483.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Xenococcus sp. PCC 7305]
gi|442795636|gb|ELS04992.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Xenococcus sp. PCC 7305]
Length = 121
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK S KV A +G+ ALE+L E+ N ++V
Sbjct: 4 VLIVEDSLAQRQMISDLLKGSGLKVVVASDGVEALEYL------EKFNP--------DIV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K + VPVV+ SS+ +++GA ++ KP +P
Sbjct: 50 VMDIVMPRMNGYELCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPV 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|229526361|ref|ZP_04415765.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae bv.
albensis VL426]
gi|422921217|ref|ZP_16954467.1| response regulator [Vibrio cholerae BJG-01]
gi|429887833|ref|ZP_19369339.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae PS15]
gi|229336519|gb|EEO01537.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae bv.
albensis VL426]
gi|341649527|gb|EGS73495.1| response regulator [Vibrio cholerae BJG-01]
gi|429225150|gb|EKY31426.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae PS15]
Length = 119
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + LK++ +V TA +G AL + + +++
Sbjct: 4 VLAVDDSISIRQMVSHTLKDAGYEVETAADGREALA--------------KAQKARFDVI 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP MTG+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 50 ISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 109
Query: 143 DVKK 146
+ K
Sbjct: 110 TLLK 113
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N +V A NG++A + L ++ +++LV
Sbjct: 86 VLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIE------------NRIDLV 133
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI K VPVV++SS + + +CL +GA F++KP++ +
Sbjct: 134 LTEVVMPCVSGIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 193
Query: 143 DVKKLTGHL 151
++K L HL
Sbjct: 194 ELKNLWQHL 202
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRK 147
Query: 142 SDVKKLTGHL 151
+++K L H+
Sbjct: 148 NELKNLWAHV 157
>gi|345018490|ref|YP_004820843.1| response regulator receiver protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033833|gb|AEM79559.1| response regulator receiver protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 123
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P VL VDDS R ++L+N +V A NG ALE K +
Sbjct: 3 PSVLIVDDSAAVRGFHSSILRNIGFEVEEAANGYEALE--------------KYLAKKFD 48
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++ D MP M GYEL+++I+E + VPV+V+S+E+ E GA +++ KP+
Sbjct: 49 LLLVDVNMPKMHGYELVRQIREQELHGFVPVIVISTESGENDYLEAFRVGANLYLEKPVD 108
Query: 141 PS----DVKKLTG 149
P K LTG
Sbjct: 109 PICLQLSAKMLTG 121
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS N + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|156035793|ref|XP_001586008.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698505|gb|EDN98243.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1059
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S S S ++P P H+L V+D+IV++K++ L+ + C V+ A +G+ ALEFL ++
Sbjct: 885 SRRSQSPASPTPKHILIVEDNIVNQKVLSKQLRGAGCTVSVANHGLEALEFL---EKSTF 941
Query: 69 QNNLNSN--GTKVNLVITDYCMPGMTGYELLKKI----KESSVMKEVPVVVVSSENIPTR 122
L G N+++ D MP M G +++I KE V VPV+ V++ +
Sbjct: 942 STTLPEGDPGIPCNILLMDLEMPIMDGLTCVREIRKWEKEGKVKGRVPVIAVTANARSEQ 1001
Query: 123 INECLEEGAQMFMLKPLK 140
I E G + KP +
Sbjct: 1002 IARAKEAGMDSVVTKPFR 1019
>gi|115523213|ref|YP_780124.1| response regulator receiver protein [Rhodopseudomonas palustris
BisA53]
gi|115517160|gb|ABJ05144.1| response regulator receiver protein [Rhodopseudomonas palustris
BisA53]
Length = 121
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VLAVDDS R +V LK + +V AE+G RAL L N K +L
Sbjct: 4 RVLAVDDSKTMRDMVTFTLKKAGFEVAEAEDGQRALAVL--------------NTAKFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G L+K+++ +S + VP++++++E + + GA +++KP P
Sbjct: 50 IITDLNMPNMDGITLIKQVRAASSHRAVPILILTTETDGAKKADGKAAGATGWLVKPFSP 109
Query: 142 SDVKKL 147
+ +L
Sbjct: 110 EKLVEL 115
>gi|449529114|ref|XP_004171546.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 127
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 104 SVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
S K++PVVV+SSEN P+RIN CLEEGA+ F+LKPL+ SDVKKL HL
Sbjct: 2 SYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHL 49
>gi|114565936|ref|YP_753090.1| sensory box histidine kinase/response regulator [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114336871|gb|ABI67719.1| Hpt sensor hybrid histidine kinase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 497
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P VL V+D+ +++KIV +L N +V A NG+ AL L V
Sbjct: 278 PIRVLLVEDNPLNQKIVGQMLYNYGFEVIMASNGLEALRIL--------------QDKPV 323
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
N+V+ D MP M GYE + I++ S +++P++ +++ ++P +CL G ++ KP
Sbjct: 324 NIVLMDMQMPVMDGYEATQFIRQHSKWRDIPIIAITAHSLPGDREKCLACGCTSYIAKPF 383
Query: 140 KPSDVKKLTGHLI 152
K ++ +L I
Sbjct: 384 KAHELVQLMKEYI 396
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +V A NG++A L + Q ++LV
Sbjct: 90 VLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQ------------IDLV 137
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI K VPV+++SS + + +CL +GA F++KP++ +
Sbjct: 138 LTEVVMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 197
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 198 ELKNLWQHV 206
>gi|156743143|ref|YP_001433272.1| CheA signal transduction histidine kinase [Roseiflexus castenholzii
DSM 13941]
gi|156234471|gb|ABU59254.1| CheA signal transduction histidine kinase [Roseiflexus castenholzii
DSM 13941]
Length = 781
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
A + S + + + P ++ VDDS+ R + +N+L+ + +V A +GM AL+ L
Sbjct: 645 ADVAVSGADAQHRTPQIVVVDDSLTTRMLEKNILEAAGYQVHLATDGMEALDVL------ 698
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
+ L +NG +LVI+D MP + G+EL +K++ S K +P+V+V+S + P
Sbjct: 699 ---HRLAANG-GCDLVISDIDMPRLNGFELTEKLRVSERFKHLPIVLVTSLDAPEHRERG 754
Query: 127 LEEGAQMFMLK 137
+ GA +++K
Sbjct: 755 VAVGADAYIVK 765
>gi|373487927|ref|ZP_09578593.1| response regulator receiver [Holophaga foetida DSM 6591]
gi|372007701|gb|EHP08330.1| response regulator receiver [Holophaga foetida DSM 6591]
Length = 138
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P+ +L V+DS + LK +V TA NG+ ALE LG QE
Sbjct: 10 PEGTKILVVEDSAPTAHLFSARLKMEGIEVLTARNGLEALEILG----QE---------- 55
Query: 78 KVNLVITDYCMPGMTGYELLKKIKE-SSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
++LV+TD MPGM GY L+ +I++ + + +P++VVSS + C E GA +M
Sbjct: 56 PISLVVTDLMMPGMDGYRLVHEIRQLAPPLASIPIIVVSSNQRESEQVRCFEAGADEYMT 115
Query: 137 KPLK-PSDVKKL 147
KP+ P V++L
Sbjct: 116 KPVSLPLLVERL 127
>gi|430746247|ref|YP_007205376.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Singulisphaera acidiphila DSM
18658]
gi|430017967|gb|AGA29681.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Singulisphaera acidiphila DSM
18658]
Length = 245
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
KP ++L VDD R + L +S +VT AE+G AL++L G K
Sbjct: 3 KPANILIVDDEPNVRLMFRTALASSGYQVTMAEDGASALDWLA--------------GGK 48
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSE-NIPTRINECLEEGAQMFMLK 137
++++ D MPGM G E+L++++ES + P+V+V++ N+P + + ++ GA F+ K
Sbjct: 49 ADVILLDLHMPGMDGMEVLQRLRESG--DDTPIVIVTAHGNVPNAV-QAMKLGAIDFLTK 105
Query: 138 PLKPSDVKKLTGHLI 152
PL P ++ +I
Sbjct: 106 PLTPDKLRATVADVI 120
>gi|222099179|ref|YP_002533747.1| Response regulator [Thermotoga neapolitana DSM 4359]
gi|221571569|gb|ACM22381.1| Response regulator [Thermotoga neapolitana DSM 4359]
Length = 122
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS V RKIV LK + C+V AENG ALE L S T +L
Sbjct: 4 KVLLVDDSAVLRKIVSFNLKKAGCEVIEAENGQIALEKL-------------SEFTP-DL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++ D MP M G+ +LKK++E K++PV+V++++ L GA+ M KP P
Sbjct: 50 IVLDIMMPVMDGFTVLKKLQEKEEWKKIPVIVLTAKGGEDDETIALSLGAKKVMRKPFSP 109
Query: 142 SDVKKLTGHLIN 153
S + L+N
Sbjct: 110 SQFIEEVKRLLN 121
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R +V LL+N + +V A NG++A + L E N ++L+
Sbjct: 85 LVEYDDST--RHVVTALLRNCSYEVIDAANGLQAWKIL------EDLTN------HIDLI 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL KI K +PVV++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHL 151
+++K L H+
Sbjct: 148 NELKNLWAHV 157
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 35 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 80
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS ++ + CL GA F+ KP++
Sbjct: 81 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRK 140
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 141 NELKNLWAHVW 151
>gi|443317340|ref|ZP_21046753.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442783029|gb|ELR92956.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 381
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P VL VDDS+ +R ++++LL++ VT AENG +AL+ + E +
Sbjct: 4 PAQVLIVDDSVDNRFLLQSLLEDEGYIVTVAENGAKALDHIAGKGEAQLP---------- 53
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L++ D MPGM+GYE+ + ++ + + +P+++V++ + + E L+ GA F+ KP
Sbjct: 54 DLILLDVMMPGMSGYEVTRWVRGQAELPFIPILLVTAHE-QSNVVEGLDAGADDFIRKPF 112
Query: 140 KPSDVKKL 147
DV++L
Sbjct: 113 ---DVEEL 117
>gi|183220972|ref|YP_001838968.1| chemotaxis protein CheY [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911067|ref|YP_001962622.1| response regulator receiver domain-containing protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775743|gb|ABZ94044.1| Response regulator receiver domain [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779394|gb|ABZ97692.1| Chemotaxis protein CheY [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 121
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +DDS V RKI+ LKN+ + A +G+ L+ L +N V+L+
Sbjct: 5 ILIIDDSAVFRKIISVHLKNANFDLIEAGDGLEGLK------------QLEANA--VDLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
++D MP M G +KK+KE++ K P++++++E+ P + + ++ GA+ ++ KP P
Sbjct: 51 VSDMNMPNMDGISFIKKVKENAKFKFTPIIMLTTESQPEKKQQGMDAGAKAWLTKPFSPE 110
Query: 143 DV 144
++
Sbjct: 111 EL 112
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+LAVDD V V LK+ V+ A NG ALE L +G +L
Sbjct: 13 HILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVL-------------KSGNTFDL 59
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G + L++ + S +++P++++SS + + +CL +GA +++KPL P
Sbjct: 60 ILSDVMMPVMNGPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPLTP 119
Query: 142 SDVKKL 147
+K +
Sbjct: 120 QVLKNM 125
>gi|330828170|ref|YP_004391122.1| CheY-like receiver [Aeromonas veronii B565]
gi|406678627|ref|ZP_11085802.1| hypothetical protein HMPREF1170_04010 [Aeromonas veronii AMC35]
gi|423201285|ref|ZP_17187865.1| hypothetical protein HMPREF1167_01448 [Aeromonas veronii AER39]
gi|423204149|ref|ZP_17190705.1| hypothetical protein HMPREF1168_00340 [Aeromonas veronii AMC34]
gi|423211141|ref|ZP_17197694.1| hypothetical protein HMPREF1169_03212 [Aeromonas veronii AER397]
gi|328803306|gb|AEB48505.1| CheY-like receiver [Aeromonas veronii B565]
gi|404614143|gb|EKB11147.1| hypothetical protein HMPREF1169_03212 [Aeromonas veronii AER397]
gi|404617857|gb|EKB14791.1| hypothetical protein HMPREF1167_01448 [Aeromonas veronii AER39]
gi|404621740|gb|EKB18606.1| hypothetical protein HMPREF1170_04010 [Aeromonas veronii AMC35]
gi|404627823|gb|EKB24621.1| hypothetical protein HMPREF1168_00340 [Aeromonas veronii AMC34]
Length = 338
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RK++E L+ + V TA++G LE + D Q+ + G VN V
Sbjct: 199 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERMPVTGF-VNAV 257
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
ITD MP M G LLK+++++ KE+P+V+ SS + L+ GA + KP
Sbjct: 258 ITDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTITKP 313
>gi|62082589|gb|AAX62130.1| response regulator protein [Bacillus thuringiensis phage MZTP02]
Length = 342
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RK++E L+ + V TA++G LE + D Q+ + G VN V
Sbjct: 203 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERMPVTGF-VNAV 261
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
ITD MP M G LLK+++++ KE+P+V+ SS + L+ GA + KP
Sbjct: 262 ITDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTITKP 317
>gi|440226990|ref|YP_007334081.1| two-component response regulator protein [Rhizobium tropici CIAT
899]
gi|440038501|gb|AGB71535.1| two-component response regulator protein [Rhizobium tropici CIAT
899]
Length = 279
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AENG +ALE L + + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEIL-------------KASSDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++TDY MP M G+EL ++I+ ++ E+ ++ VSS + L+ G F+L+P
Sbjct: 190 MVTDYNMPDMDGFELTRRIRATTGSHELRIIGVSSSSNRLLSARFLKAGGNDFILRPF 247
>gi|375013988|ref|YP_004990976.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
gi|359349912|gb|AEV34331.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
Length = 126
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL +DD + RK+++ +LK +V ENG ALE++ +G +L
Sbjct: 6 QVLIIDDEPIMRKLLQQILK-EKYEVILKENGREALEWM-------------YSGNIPDL 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ D MP + G+E ++K++ES +VP++V+S E +CL+ GA +++KP P
Sbjct: 52 VVADLNMPEIDGFEYIEKVRESGFFNDVPLIVLSGEESSAERIKCLKLGANDYLIKPFNP 111
Query: 142 SDVKKLTGHLI 152
++ +LI
Sbjct: 112 EELGLRIDNLI 122
>gi|359434553|ref|ZP_09224816.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20652]
gi|357918762|dbj|GAA61065.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20652]
Length = 299
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K VL VDD ++R ++E LK + V ENG +AL F+ T+
Sbjct: 3 KRAKVLVVDDDPLNRLVLEKTLK-AEHDVFLVENGEKALTFV--------------KTTQ 47
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V+L+I D MPG+ GYE+L ++KE+ + + +PV+ +S+ + + LE GA ++ KP
Sbjct: 48 VDLIILDVIMPGIDGYEVLVQLKENPITQAIPVIFISANHSHDDEAKGLELGAMDYITKP 107
Query: 139 LKPSDVK 145
PS V+
Sbjct: 108 FSPSIVR 114
>gi|298493029|ref|YP_003723206.1| response regulator receiver protein ['Nostoc azollae' 0708]
gi|298234947|gb|ADI66083.1| response regulator receiver protein ['Nostoc azollae' 0708]
Length = 121
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ ALE + T +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHAGDGVEALEAI--------------QSTPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYELCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|357407163|ref|YP_004919087.1| chemotaxis protein CheY [Methylomicrobium alcaliphilum 20Z]
gi|351719828|emb|CCE25504.1| Chemotaxis protein CheY/response regulator receiver domain protein
[Methylomicrobium alcaliphilum 20Z]
Length = 267
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSA-CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
VL VDDS + RK + +L N ++TTA +G A E + G +
Sbjct: 146 RVLVVDDSSMARKHIVRVLNNMGITQITTANDGKAAAELF------------QATGEAFD 193
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++TDY MP M G EL+ I+ +P+++V+SE+ TR+++ + G KP +
Sbjct: 194 LIVTDYNMPEMDGRELISHIRNDRQNTFIPILMVTSESNETRLDQVQQAGVSAICDKPFE 253
Query: 141 PSDVKKLTGHLIN 153
P +VK++ ++N
Sbjct: 254 PQNVKEILFRVLN 266
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
K +L+I+ +P MT E++ KIK + + +VP +++SSE + ++ + G + K
Sbjct: 53 KPDLIISSMYLPDMTAAEMIVKIKANEELNDVPFMLISSETRFSALDPIRQAGVVAILPK 112
Query: 138 PLKPSDVKK 146
P ++++
Sbjct: 113 PFDHDNLRR 121
>gi|149910672|ref|ZP_01899309.1| Chemotaxis protein CheY (2 CheY domains) [Moritella sp. PE36]
gi|149806299|gb|EDM66275.1| Chemotaxis protein CheY (2 CheY domains) [Moritella sp. PE36]
Length = 265
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 23 VLAVDDSIVDRK-IVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS+ RK I L VTTAENG+ ALE+L QN + L
Sbjct: 146 ILVVDDSLTARKHICRVLFSMGIVGVTTAENGVEALEYLA-------QNTFD-------L 191
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MP M G EL++KI+ + + +P+++V+SE +++ + G KP
Sbjct: 192 IVTDYNMPEMDGKELVEKIRTNPELSYLPILMVTSEEGSAQLSAVKQAGVSALCDKPFDI 251
Query: 142 SDVKKLTGHLIN 153
V+ L L+N
Sbjct: 252 DTVRMLVQQLLN 263
>gi|88603985|ref|YP_504163.1| response regulator receiver domain-containing protein
[Methanospirillum hungatei JF-1]
gi|88189447|gb|ABD42444.1| response regulator receiver domain protein (CheY-like)
[Methanospirillum hungatei JF-1]
Length = 436
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 16 SNPKPP-HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
SNP H+L V+D+ + + +LL+ +VT ++NG ALE ++E+
Sbjct: 3 SNPDTSLHILIVEDNRTQAEYLRHLLEKRGHQVTVSQNGFEALE---RIEEK-------- 51
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+ ++++TD MP M GY L K +K+ ++PV++V+ P + + LE GA F
Sbjct: 52 ---RPDIILTDVMMPDMDGYTLCKTVKQHEKFHDIPVILVTHLYSPVDVIKGLEAGADNF 108
Query: 135 MLKPLKPSDV-KKLTG 149
++KP P + ++TG
Sbjct: 109 IIKPYDPEYIFSRITG 124
>gi|428201053|ref|YP_007079642.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
gi|427978485|gb|AFY76085.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
Length = 121
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS ++I+ +LLKNS KVT ++G+ ALE + NLV
Sbjct: 4 VLVVEDSPTQQQIILDLLKNSGLKVTIVQDGVEALE--------------HVQKYHPNLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D MP M GYE+ +++K K+VPV++ S++ +++GA +++KP +P
Sbjct: 50 ILDIVMPRMNGYEVCRRLKSDPKTKDVPVILCSTKAEEFDRYWGMKQGADAYIVKPFQPV 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|373458375|ref|ZP_09550142.1| CheA signal transduction histidine kinase [Caldithrix abyssi DSM
13497]
gi|371720039|gb|EHO41810.1| CheA signal transduction histidine kinase [Caldithrix abyssi DSM
13497]
Length = 747
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
KP +L V+DSI R +++N+L+++ +V TA NG +A + L Q+Q
Sbjct: 624 KPKQILVVEDSITSRVLLKNVLESAGFEVQTAINGQQAWQIL-----QKQ---------T 669
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+L+I+D MP M G EL +KIK MK +PV++++S + + LE GA + +K
Sbjct: 670 FDLIISDVQMPEMDGVELTRKIKAEQKMKSIPVILLTSLGSESDRKKGLEAGANAYFIK 728
>gi|20807517|ref|NP_622688.1| chemotaxis protein CheY [Thermoanaerobacter tengcongensis MB4]
gi|20516048|gb|AAM24292.1| CheY-like receiver domains [Thermoanaerobacter tengcongensis MB4]
Length = 134
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P VL VDDS R ++L+N +V A NG ALE K +
Sbjct: 14 PSVLIVDDSAAVRGFHGSILRNVGFEVEEAANGYEALE--------------KYLAKKFD 59
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L++ D MP M GYEL+++I+E + VPV+V+S+E+ E GA +++ KP+
Sbjct: 60 LLLVDVNMPKMHGYELIRQIREQELHGFVPVIVISTESGENDYLEAFRVGANLYLEKPVD 119
Query: 141 PS----DVKKLTG 149
P K LTG
Sbjct: 120 PICLQLSAKMLTG 132
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS RKIV LL+ + KV++A +G+ A + L +E NN ++LV
Sbjct: 35 LVEADDST--RKIVAALLRKCSYKVSSASDGLEAWKTL-----KESPNN-------IDLV 80
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL + E K +PV+++SS + + EC+ +GA F++KP++ +
Sbjct: 81 LTEVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKN 140
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 141 ELRNLWQHVW 150
>gi|418054526|ref|ZP_12692582.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
gi|353212151|gb|EHB77551.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
Length = 456
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD + + K++E L+ +V TA +G +AL+ L E+E V++V
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDLL----ERES----------VDVV 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MPGM G+E ++IK S +PVV+V++ + PT + LE GA F+ KP+
Sbjct: 51 LLDVMMPGMDGFETCRRIKASHATHHIPVVMVTALDQPTDKVQGLESGADDFLTKPV 107
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
VAS+ S + +S+ +L VDD IV ++LK + +V T +N + AL
Sbjct: 6 VASTHSHNKNSSLLTVQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALS------- 58
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
+L S+ +LVITD MPGM G +L K+I E ++PVV++SS+ + I E
Sbjct: 59 -----SLQSSDGAFDLVITDLHMPGMNGIQLQKQIDEE---FKIPVVIMSSDGKRSAILE 110
Query: 126 CLEEGAQMFMLKPLKPSDVKKL 147
LE GA +M+KP+ D+K +
Sbjct: 111 SLESGAVYYMVKPVNLRDLKNV 132
>gi|357404372|ref|YP_004916296.1| Multi-sensor hybrid histidine kinase (modular protein)
[Methylomicrobium alcaliphilum 20Z]
gi|351717037|emb|CCE22702.1| Multi-sensor hybrid histidine kinase (modular protein)
[Methylomicrobium alcaliphilum 20Z]
Length = 1528
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L V+D+ +++++V +L+N VT AENG AL+ L EQE ++V
Sbjct: 1194 ILVVEDNALNQEVVVEILQNRGASVTVAENGRVALDKL----EQE----------IFDIV 1239
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+E ++IK +PVVV+S+ +P C GA F+ KP+ P
Sbjct: 1240 LMDLQMPEMDGFEATRRIKAIPDYHALPVVVMSAAVMPEERARCRLAGADDFVAKPVDPG 1299
Query: 143 DVKKLTGHLIN 153
D+++L +N
Sbjct: 1300 DLERLLVKWLN 1310
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
S + VL VDD R I+E LL T+++G AL + EQ+N
Sbjct: 1043 SRIRAQRVLVVDDQSTSRLILECLLTEWGVICDTSDSGEDALR---QIYRAEQKN----- 1094
Query: 76 GTKVNLVITDYCMPGMTGYELLKKI----KESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ V+ D+ MPGM+G E+ +++ ++ + + V+++++ + + +
Sbjct: 1095 -CPFSTVLLDWRMPGMSGAEVAERLENDCRKGLLKHPLTVIMITAYDKEQLLAQADRIHF 1153
Query: 132 QMFMLKPLKPSDV-KKLTGHLI 152
+ KP+ PS + + L GH +
Sbjct: 1154 DKILTKPVTPSVLYETLAGHSV 1175
>gi|334137368|ref|ZP_08510806.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333605141|gb|EGL16517.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1040
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD V+ +++ NLL ++ + G +A+ +G +G ++LV
Sbjct: 704 VLLVDDDPVNLQVLYNLLSVEGYRLIAVDGGAKAMAHIG-------------SGQSIDLV 750
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D+ MPGM+G EL + I+ + E+PV+++++ ++P + + GA F+ KP+
Sbjct: 751 IADWMMPGMSGLELCRAIRARLSLAELPVLLLTARSLPEDVRTGFQAGANDFLRKPVDAD 810
Query: 143 DVK 145
+++
Sbjct: 811 ELR 813
>gi|90020314|ref|YP_526141.1| response regulator receiver domain-containing protein [Saccharophagus
degradans 2-40]
gi|89949914|gb|ABD79929.1| GGDEF domain [Saccharophagus degradans 2-40]
Length = 1526
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
+ + S S + H+L VDD V+RK++ N L V +GM A+ ++
Sbjct: 1132 AQAESKSDTARTYHILIVDDEPVNRKVLANYLSLKYYTVHEVRSGMEAITYV-------- 1183
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
NG KV+L++ D MP M+GYE K++++ E+P++++++ + + +
Sbjct: 1184 -----RNGPKVDLILLDIMMPKMSGYEACKQLRQQYSANELPIILLTARSQVSDLVTGFN 1238
Query: 129 EGAQMFMLKPLKPSDV 144
GA F+ KP+ ++
Sbjct: 1239 SGANDFITKPIAKEEL 1254
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHL 151
+++K L H+
Sbjct: 148 NELKNLWAHV 157
>gi|424919277|ref|ZP_18342641.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392855453|gb|EJB07974.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 276
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TAENG +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 190 MITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|209549746|ref|YP_002281663.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535502|gb|ACI55437.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 268
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TAENG +ALE L + L
Sbjct: 135 HVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEIL-------------KANRDIGL 181
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 182 MITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 239
>gi|411118667|ref|ZP_11391047.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410710530|gb|EKQ68037.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 351
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD +R ++ L+ KVT A NG AL GL+ +Q +L+
Sbjct: 8 LLVVDDMEANRDLLTRRLQRQGHKVTVATNGREAL---GLIKQQ-----------SFDLI 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GY++L+++K ++ +PV+++S+ + + C+E GA+ ++ KP P+
Sbjct: 54 LCDIMMPEMDGYQVLEELKADPGLRHIPVIMISALDDMESVVRCIELGAEDYLFKPFNPT 113
Query: 143 DVKKLTG 149
+K G
Sbjct: 114 LLKARIG 120
>gi|206889466|ref|YP_002249856.1| Chemotaxis protein CheY [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741404|gb|ACI20461.1| putative Chemotaxis protein CheY [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 124
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDD RK++ +LK+ +V TAENG+ AL+ LGL ++NL
Sbjct: 2 KVLIVDDDKTTRKMISLILKSKGYEVVTAENGIEALQKLGL--------------ERINL 47
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TD MP M G E +K+++ + + +P+V++++E E G +++KP
Sbjct: 48 ILTDMNMPYMDGIEFIKQVRANPDIANIPIVMITTEADEDEKRRAFEAGVDDYLVKPTNA 107
Query: 142 SDV----KKLTGHLIN 153
+ KK+ + N
Sbjct: 108 EQISESMKKIVKKIFN 123
>gi|83647950|ref|YP_436385.1| signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gi|83635993|gb|ABC31960.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 758
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL V+D+ V+R + +L+ C+V AENG A++ +G T +L
Sbjct: 634 RVLLVEDNTVNRNLARKMLEKCGCRVDFAENGEIAIQQMG--------------STHFDL 679
Query: 82 VITDYCMPGMTGYELLKKIKES-SVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ D MP M GYE ++I+ES +P+V +++ P +C++ G F+ KP++
Sbjct: 680 IFMDCWMPVMDGYETTRRIRESGQSFSHIPIVALTANAFPGEKEKCMQCGMDDFLTKPIR 739
Query: 141 PSDVKKLTGHL 151
++ + H
Sbjct: 740 FEELSAIVRHF 750
>gi|15643234|ref|NP_228278.1| response regulator [Thermotoga maritima MSB8]
gi|403252205|ref|ZP_10918515.1| response regulator [Thermotoga sp. EMP]
gi|418045358|ref|ZP_12683454.1| response regulator receiver protein [Thermotoga maritima MSB8]
gi|251836870|pdb|3DGE|C Chain C, Structure Of A Histidine Kinase-response Regulator Complex
Reveals Insights Into Two-component Signaling And A
Novel Cis- Autophosphorylation Mechanism
gi|251836872|pdb|3DGE|D Chain D, Structure Of A Histidine Kinase-response Regulator Complex
Reveals Insights Into Two-component Signaling And A
Novel Cis- Autophosphorylation Mechanism
gi|251836873|pdb|3DGF|C Chain C, Structure Of A Histidine Kinase-Response Regulator Complex
Reveals Insights Into Two-Component Signaling And A
Novel Cis- Autophosphorylation Mechanism
gi|4980976|gb|AAD35552.1|AE001724_10 response regulator [Thermotoga maritima MSB8]
gi|351678440|gb|EHA61587.1| response regulator receiver protein [Thermotoga maritima MSB8]
gi|402812218|gb|EJX26697.1| response regulator [Thermotoga sp. EMP]
Length = 122
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS V RKIV LK +V AENG ALE L S T +L+
Sbjct: 5 VLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKL-------------SEFTP-DLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+ +LKK++E K +PV+V++++ + L GA+ M KP PS
Sbjct: 51 VLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPS 110
Query: 143 DVKKLTGHLIN 153
+ HL+N
Sbjct: 111 QFIEEVKHLLN 121
>gi|300866045|ref|ZP_07110777.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300335960|emb|CBN55935.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 352
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 14/124 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P+ +VL VDD+ V+R ++ L+ KV AE+G+ ALE +
Sbjct: 3 PEEGNVLVVDDNEVNRDLLARRLQRQGHKVQVAEDGILALEMM--------------RSH 48
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+LV+ D MP M GY++L+ +K ++ +PV+++S+ + I C+E GA+ ++ K
Sbjct: 49 PFDLVLLDIMMPQMNGYQVLEHLKADDKLRYIPVIMISAVDDIDSIVRCIELGAEDYLSK 108
Query: 138 PLKP 141
P P
Sbjct: 109 PFNP 112
>gi|379011725|ref|YP_005269537.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
gi|375302514|gb|AFA48648.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
Length = 124
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +DDS V RKI+ + + AE+ AL+ L K+ L+
Sbjct: 3 MLTIDDSAVVRKIISAAVVVLGHECLEAESAQDALDLL-------------KGPEKIELI 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
D+ MPGM G E LK IK+S K +PVV+V++EN+P + E ++ G ++ KP
Sbjct: 50 FLDWNMPGMNGLEFLKTIKKSDQFKHIPVVMVTTENMPESVIEAVKAGVTQYITKPFSIE 109
Query: 143 DVKK 146
++ K
Sbjct: 110 ELMK 113
>gi|302872938|ref|YP_003841571.1| signal transduction histidine kinase LytS [Clostridium
cellulovorans 743B]
gi|307686548|ref|ZP_07628994.1| signal transduction histidine kinase, LytS [Clostridium
cellulovorans 743B]
gi|302575795|gb|ADL49807.1| signal transduction histidine kinase, LytS [Clostridium
cellulovorans 743B]
Length = 1028
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD I++ + N+LK+ +T +G A+E L +LV
Sbjct: 707 ILVVDDEIINLHSIANILKHENYDITCVADGESAIEIL-------------KRDKSFSLV 753
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
I D MP MTGY++ K I+E+ + E+P++++++ N P + + +EGA F+ KP +
Sbjct: 754 ILDIMMPDMTGYQVCKAIRETDNLFEMPILMLTASNQPKTVIQAFKEGANDFLYKPFE 811
>gi|197118407|ref|YP_002138834.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
gi|197087767|gb|ACH39038.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
Length = 452
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
S++ P +L VDDS K++E LL +V A NG ALE + +E+Q +L
Sbjct: 4 SNNGQTAPYLILIVDDSPTQAKLLEQLLAGEGYRVAIARNGSDALEQI-----RERQPDL 58
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
VI+D MP M G+EL ++++ +K+ P+V+++ N P+ + LE GA
Sbjct: 59 ---------VISDILMPEMDGFELCRRVRGMESIKDTPIVLLTHLNDPSDVLHSLEAGAN 109
Query: 133 MFMLKP 138
F+ KP
Sbjct: 110 YFVSKP 115
>gi|163846429|ref|YP_001634473.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl]
gi|222524203|ref|YP_002568674.1| CheA signal transduction histidine kinase [Chloroflexus sp.
Y-400-fl]
gi|163667718|gb|ABY34084.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl]
gi|222448082|gb|ACM52348.1| CheA signal transduction histidine kinase [Chloroflexus sp.
Y-400-fl]
Length = 753
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 15 SSNPKPPH---VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
++NP P H +L VDDSI R + +N+L+ + +V A +G ALE L +N
Sbjct: 622 TANPTPAHSPTILVVDDSITTRTLEKNILEAAGYRVVLATDGQEALERL---------HN 672
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
L + G LV++D MP + G++L ++I+ + +PVV+V+S + P L GA
Sbjct: 673 LQNQG-GCQLVLSDIDMPRLNGFDLTRQIRTDPAFRHLPVVLVTSLDSPADRERGLAAGA 731
Query: 132 QMFMLK 137
+++K
Sbjct: 732 DAYIVK 737
>gi|147671709|ref|YP_001214988.1| chemotaxis protein CheY [Vibrio cholerae O395]
gi|153816752|ref|ZP_01969419.1| chemotaxis protein CheY [Vibrio cholerae NCTC 8457]
gi|153821179|ref|ZP_01973846.1| chemotaxis protein CheY [Vibrio cholerae B33]
gi|229506834|ref|ZP_04396343.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae BX
330286]
gi|229510372|ref|ZP_04399852.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae B33]
gi|229514501|ref|ZP_04403962.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae TMA
21]
gi|229517497|ref|ZP_04406942.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae RC9]
gi|229528021|ref|ZP_04417412.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae
12129(1)]
gi|229605307|ref|YP_002876011.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae
MJ-1236]
gi|255746179|ref|ZP_05420126.1| chemotaxis regulator CheY [Vibrio cholera CIRS 101]
gi|262158668|ref|ZP_06029782.1| chemotaxis regulator CheY [Vibrio cholerae INDRE 91/1]
gi|262168922|ref|ZP_06036616.1| chemotaxis regulator CheY [Vibrio cholerae RC27]
gi|262192316|ref|ZP_06050471.1| chemotaxis regulator CheY [Vibrio cholerae CT 5369-93]
gi|360037990|ref|YP_004939752.1| chemotaxis protein CheY [Vibrio cholerae O1 str. 2010EL-1786]
gi|379744472|ref|YP_005335524.1| chemotaxis protein CheY [Vibrio cholerae IEC224]
gi|384423345|ref|YP_005632704.1| chemotaxis regulator [Vibrio cholerae LMA3984-4]
gi|417812038|ref|ZP_12458699.1| response regulator [Vibrio cholerae HC-49A2]
gi|417816662|ref|ZP_12463292.1| response regulator [Vibrio cholerae HCUF01]
gi|417819598|ref|ZP_12466213.1| response regulator [Vibrio cholerae HE39]
gi|417822934|ref|ZP_12469532.1| response regulator [Vibrio cholerae HE48]
gi|418330636|ref|ZP_12941615.1| response regulator [Vibrio cholerae HC-06A1]
gi|418337561|ref|ZP_12946456.1| response regulator [Vibrio cholerae HC-23A1]
gi|418342177|ref|ZP_12949006.1| response regulator [Vibrio cholerae HC-28A1]
gi|418349234|ref|ZP_12953966.1| response regulator [Vibrio cholerae HC-43A1]
gi|419825963|ref|ZP_14349466.1| response regulator [Vibrio cholerae CP1033(6)]
gi|421316978|ref|ZP_15767548.1| response regulator [Vibrio cholerae CP1032(5)]
gi|421323945|ref|ZP_15774472.1| response regulator [Vibrio cholerae CP1041(14)]
gi|421326915|ref|ZP_15777433.1| response regulator [Vibrio cholerae CP1042(15)]
gi|421332004|ref|ZP_15782483.1| response regulator [Vibrio cholerae CP1046(19)]
gi|421341344|ref|ZP_15791764.1| response regulator [Vibrio cholerae HC-20A2]
gi|421346196|ref|ZP_15796580.1| response regulator [Vibrio cholerae HC-46A1]
gi|421349676|ref|ZP_15800045.1| response regulator [Vibrio cholerae HE-25]
gi|421355458|ref|ZP_15805789.1| response regulator [Vibrio cholerae HE-45]
gi|422312570|ref|ZP_16396225.1| response regulator [Vibrio cholerae CP1035(8)]
gi|422890010|ref|ZP_16932470.1| response regulator [Vibrio cholerae HC-40A1]
gi|422899489|ref|ZP_16936201.1| response regulator [Vibrio cholerae HC-48A1]
gi|422904967|ref|ZP_16939854.1| response regulator [Vibrio cholerae HC-70A1]
gi|422915309|ref|ZP_16949758.1| response regulator [Vibrio cholerae HFU-02]
gi|422927970|ref|ZP_16960914.1| response regulator [Vibrio cholerae HC-38A1]
gi|423147043|ref|ZP_17134531.1| response regulator [Vibrio cholerae HC-19A1]
gi|423148033|ref|ZP_17135411.1| response regulator [Vibrio cholerae HC-21A1]
gi|423151818|ref|ZP_17139049.1| response regulator [Vibrio cholerae HC-22A1]
gi|423158442|ref|ZP_17145455.1| response regulator [Vibrio cholerae HC-32A1]
gi|423162247|ref|ZP_17149119.1| response regulator [Vibrio cholerae HC-33A2]
gi|423163347|ref|ZP_17150163.1| response regulator [Vibrio cholerae HC-48B2]
gi|423733211|ref|ZP_17706452.1| response regulator [Vibrio cholerae HC-17A1]
gi|423743352|ref|ZP_17710851.1| response regulator [Vibrio cholerae HC-50A2]
gi|423910596|ref|ZP_17728584.1| response regulator [Vibrio cholerae HC-62A1]
gi|423919667|ref|ZP_17729497.1| response regulator [Vibrio cholerae HC-77A1]
gi|423952939|ref|ZP_17734330.1| response regulator [Vibrio cholerae HE-40]
gi|423981464|ref|ZP_17737694.1| response regulator [Vibrio cholerae HE-46]
gi|424002280|ref|ZP_17745365.1| response regulator [Vibrio cholerae HC-17A2]
gi|424004524|ref|ZP_17747530.1| response regulator [Vibrio cholerae HC-37A1]
gi|424022456|ref|ZP_17762139.1| response regulator [Vibrio cholerae HC-62B1]
gi|424029235|ref|ZP_17768786.1| response regulator [Vibrio cholerae HC-69A1]
gi|424588724|ref|ZP_18028220.1| response regulator [Vibrio cholerae CP1030(3)]
gi|424590594|ref|ZP_18030030.1| response regulator [Vibrio cholerae CP1037(10)]
gi|424593474|ref|ZP_18032833.1| response regulator [Vibrio cholerae CP1040(13)]
gi|424597401|ref|ZP_18036618.1| response regulator [Vibrio Cholerae CP1044(17)]
gi|424603144|ref|ZP_18042278.1| response regulator [Vibrio cholerae CP1047(20)]
gi|424604979|ref|ZP_18043966.1| response regulator [Vibrio cholerae CP1050(23)]
gi|424608806|ref|ZP_18047684.1| response regulator [Vibrio cholerae HC-39A1]
gi|424615585|ref|ZP_18054301.1| response regulator [Vibrio cholerae HC-41A1]
gi|424619431|ref|ZP_18058036.1| response regulator [Vibrio cholerae HC-42A1]
gi|424620344|ref|ZP_18058892.1| response regulator [Vibrio cholerae HC-47A1]
gi|424642971|ref|ZP_18080749.1| response regulator [Vibrio cholerae HC-56A2]
gi|424651085|ref|ZP_18088631.1| response regulator [Vibrio cholerae HC-57A2]
gi|424654868|ref|ZP_18092186.1| response regulator [Vibrio cholerae HC-81A2]
gi|440711270|ref|ZP_20891911.1| chemotaxis protein CheY [Vibrio cholerae 4260B]
gi|443505833|ref|ZP_21072720.1| response regulator [Vibrio cholerae HC-64A1]
gi|443509741|ref|ZP_21076434.1| response regulator [Vibrio cholerae HC-65A1]
gi|443513565|ref|ZP_21080135.1| response regulator [Vibrio cholerae HC-67A1]
gi|443517398|ref|ZP_21083843.1| response regulator [Vibrio cholerae HC-68A1]
gi|443521056|ref|ZP_21087387.1| response regulator [Vibrio cholerae HC-71A1]
gi|443521960|ref|ZP_21088235.1| response regulator [Vibrio cholerae HC-72A2]
gi|443533685|ref|ZP_21099626.1| response regulator [Vibrio cholerae HC-80A1]
gi|443537356|ref|ZP_21103214.1| response regulator [Vibrio cholerae HC-81A1]
gi|449057583|ref|ZP_21735879.1| Chemotaxis regulator CheY [Vibrio cholerae O1 str. Inaba G4222]
gi|126512771|gb|EAZ75365.1| chemotaxis protein CheY [Vibrio cholerae NCTC 8457]
gi|126521238|gb|EAZ78461.1| chemotaxis protein CheY [Vibrio cholerae B33]
gi|146314092|gb|ABQ18632.1| chemotaxis protein CheY [Vibrio cholerae O395]
gi|229334383|gb|EEN99868.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae
12129(1)]
gi|229345533|gb|EEO10506.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae RC9]
gi|229348481|gb|EEO13439.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae TMA
21]
gi|229352817|gb|EEO17757.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae B33]
gi|229357185|gb|EEO22103.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae BX
330286]
gi|229371793|gb|ACQ62215.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae
MJ-1236]
gi|255735933|gb|EET91331.1| chemotaxis regulator CheY [Vibrio cholera CIRS 101]
gi|262022621|gb|EEY41328.1| chemotaxis regulator CheY [Vibrio cholerae RC27]
gi|262029548|gb|EEY48198.1| chemotaxis regulator CheY [Vibrio cholerae INDRE 91/1]
gi|262031809|gb|EEY50392.1| chemotaxis regulator CheY [Vibrio cholerae CT 5369-93]
gi|327486053|gb|AEA80459.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio cholerae
LMA3984-4]
gi|340039812|gb|EGR00785.1| response regulator [Vibrio cholerae HCUF01]
gi|340040456|gb|EGR01428.1| response regulator [Vibrio cholerae HE39]
gi|340044858|gb|EGR05806.1| response regulator [Vibrio cholerae HC-49A2]
gi|340049064|gb|EGR09980.1| response regulator [Vibrio cholerae HE48]
gi|341627346|gb|EGS52663.1| response regulator [Vibrio cholerae HC-70A1]
gi|341628848|gb|EGS54041.1| response regulator [Vibrio cholerae HC-48A1]
gi|341628979|gb|EGS54163.1| response regulator [Vibrio cholerae HC-40A1]
gi|341632287|gb|EGS57158.1| response regulator [Vibrio cholerae HFU-02]
gi|341642880|gb|EGS67180.1| response regulator [Vibrio cholerae HC-38A1]
gi|356416966|gb|EHH70586.1| response regulator [Vibrio cholerae HC-19A1]
gi|356423891|gb|EHH77319.1| response regulator [Vibrio cholerae HC-06A1]
gi|356424631|gb|EHH78033.1| response regulator [Vibrio cholerae HC-21A1]
gi|356430945|gb|EHH84150.1| response regulator [Vibrio cholerae HC-23A1]
gi|356435405|gb|EHH88561.1| response regulator [Vibrio cholerae HC-32A1]
gi|356437013|gb|EHH90123.1| response regulator [Vibrio cholerae HC-22A1]
gi|356439635|gb|EHH92602.1| response regulator [Vibrio cholerae HC-28A1]
gi|356440733|gb|EHH93671.1| response regulator [Vibrio cholerae HC-33A2]
gi|356446096|gb|EHH98896.1| response regulator [Vibrio cholerae HC-43A1]
gi|356456979|gb|EHI09555.1| response regulator [Vibrio cholerae HC-48B2]
gi|356649144|gb|AET29198.1| chemotaxis protein CheY [Vibrio cholerae O1 str. 2010EL-1786]
gi|378797066|gb|AFC60536.1| chemotaxis protein CheY [Vibrio cholerae IEC224]
gi|395919436|gb|EJH30259.1| response regulator [Vibrio cholerae CP1032(5)]
gi|395921959|gb|EJH32778.1| response regulator [Vibrio cholerae CP1041(14)]
gi|395930802|gb|EJH41548.1| response regulator [Vibrio cholerae CP1046(19)]
gi|395933840|gb|EJH44579.1| response regulator [Vibrio cholerae CP1042(15)]
gi|395937176|gb|EJH47896.1| response regulator [Vibrio cholerae HC-20A2]
gi|395947723|gb|EJH58378.1| response regulator [Vibrio cholerae HC-46A1]
gi|395950128|gb|EJH60747.1| response regulator [Vibrio cholerae HE-45]
gi|395950972|gb|EJH61587.1| response regulator [Vibrio cholerae HC-42A1]
gi|395956293|gb|EJH66887.1| response regulator [Vibrio cholerae HE-25]
gi|395966167|gb|EJH76299.1| response regulator [Vibrio cholerae HC-57A2]
gi|395966867|gb|EJH76981.1| response regulator [Vibrio cholerae HC-56A2]
gi|395968165|gb|EJH78151.1| response regulator [Vibrio cholerae CP1030(3)]
gi|395973382|gb|EJH82943.1| response regulator [Vibrio cholerae CP1047(20)]
gi|395978046|gb|EJH87437.1| response regulator [Vibrio cholerae HC-47A1]
gi|408005678|gb|EKG43872.1| response regulator [Vibrio cholerae HC-41A1]
gi|408011875|gb|EKG49675.1| response regulator [Vibrio cholerae HC-39A1]
gi|408034178|gb|EKG70685.1| response regulator [Vibrio cholerae CP1037(10)]
gi|408039140|gb|EKG75434.1| response regulator [Vibrio cholerae CP1040(13)]
gi|408046436|gb|EKG82132.1| response regulator [Vibrio Cholerae CP1044(17)]
gi|408048229|gb|EKG83680.1| response regulator [Vibrio cholerae CP1050(23)]
gi|408059121|gb|EKG93896.1| response regulator [Vibrio cholerae HC-81A2]
gi|408608753|gb|EKK82136.1| response regulator [Vibrio cholerae CP1033(6)]
gi|408614560|gb|EKK87830.1| response regulator [Vibrio cholerae CP1035(8)]
gi|408615789|gb|EKK88964.1| response regulator [Vibrio cholerae HC-17A1]
gi|408645853|gb|EKL17483.1| response regulator [Vibrio cholerae HC-50A2]
gi|408649705|gb|EKL21018.1| response regulator [Vibrio cholerae HC-62A1]
gi|408659677|gb|EKL30712.1| response regulator [Vibrio cholerae HE-40]
gi|408661540|gb|EKL32525.1| response regulator [Vibrio cholerae HC-77A1]
gi|408665400|gb|EKL36216.1| response regulator [Vibrio cholerae HE-46]
gi|408847761|gb|EKL87822.1| response regulator [Vibrio cholerae HC-17A2]
gi|408850860|gb|EKL90803.1| response regulator [Vibrio cholerae HC-37A1]
gi|408872140|gb|EKM11363.1| response regulator [Vibrio cholerae HC-69A1]
gi|408876705|gb|EKM15815.1| response regulator [Vibrio cholerae HC-62B1]
gi|439972757|gb|ELP49000.1| chemotaxis protein CheY [Vibrio cholerae 4260B]
gi|443429815|gb|ELS72438.1| response regulator [Vibrio cholerae HC-64A1]
gi|443433777|gb|ELS79991.1| response regulator [Vibrio cholerae HC-65A1]
gi|443437736|gb|ELS87519.1| response regulator [Vibrio cholerae HC-67A1]
gi|443441557|gb|ELS94925.1| response regulator [Vibrio cholerae HC-68A1]
gi|443445489|gb|ELT02210.1| response regulator [Vibrio cholerae HC-71A1]
gi|443452103|gb|ELT12332.1| response regulator [Vibrio cholerae HC-72A2]
gi|443463161|gb|ELT34171.1| response regulator [Vibrio cholerae HC-80A1]
gi|443467365|gb|ELT42021.1| response regulator [Vibrio cholerae HC-81A1]
gi|448263162|gb|EMB00409.1| Chemotaxis regulator CheY [Vibrio cholerae O1 str. Inaba G4222]
Length = 119
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + L+++ +V TA +G AL + + +++
Sbjct: 4 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALA--------------KAQKARFDVI 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP MTG+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 50 ISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 109
Query: 143 DVKK 146
+ K
Sbjct: 110 TLLK 113
>gi|27367550|ref|NP_763077.1| Chemotaxis regulator [Vibrio vulnificus CMCP6]
gi|37677352|ref|NP_937748.1| chemotaxis protein CheY [Vibrio vulnificus YJ016]
gi|320159405|ref|YP_004191783.1| chemotaxis regulator [Vibrio vulnificus MO6-24/O]
gi|27359122|gb|AAO08067.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio vulnificus
CMCP6]
gi|37201898|dbj|BAC97718.1| chemotaxis protein CheY [Vibrio vulnificus YJ016]
gi|319934717|gb|ADV89580.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Vibrio vulnificus
MO6-24/O]
Length = 119
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDS+ R++V + LK++ V TA +G AL+ S TK ++V
Sbjct: 4 ILAVDDSVSIRQMVSHTLKDAGYDVETANDGSDALQ--------------KSKTTKFDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G+EL++ ++ K +P++++++E P + E GA +++KP P
Sbjct: 50 ISDVNMPNMGGFELVRAMRAIPQYKFIPILMLTTETSPEKKMEGKSAGATGWLVKPFNPD 109
Query: 143 DVKK 146
+ K
Sbjct: 110 TLLK 113
>gi|170288268|ref|YP_001738506.1| response regulator receiver protein [Thermotoga sp. RQ2]
gi|170175771|gb|ACB08823.1| response regulator receiver protein [Thermotoga sp. RQ2]
Length = 122
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS V RKIV LK +V AENG ALE L S T +L+
Sbjct: 5 ILLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALERL-------------SEFTP-DLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+ +LKK++E K +PV+V++++ + L GA+ M KP PS
Sbjct: 51 VLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPS 110
Query: 143 DVKKLTGHLIN 153
+ HL+N
Sbjct: 111 QFIEEVKHLLN 121
>gi|34497967|ref|NP_902182.1| chemotaxis protein CheY [Chromobacterium violaceum ATCC 12472]
gi|34103822|gb|AAQ60183.1| chemotaxis protein CheY [Chromobacterium violaceum ATCC 12472]
Length = 122
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD+ R V LK + V A +G AL L NG +VNLV
Sbjct: 5 ILIVDDAASIRATVSIALKGAGYDVIEACDGNDALSKL--------------NGVRVNLV 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MPGM G LLK++KE + + +PV+++++E + + E GA+ +++KP P+
Sbjct: 51 ISDVNMPGMDGITLLKRLKEGAATRFLPVIMLTTEGSDDKKMQGKEAGAKAWIVKPFDPA 110
Query: 143 DVKKLTGHLIN 153
+ LI
Sbjct: 111 KLLDAVSKLIQ 121
>gi|443315490|ref|ZP_21044978.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442784916|gb|ELR94768.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1118
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 15 SSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
SSN VL VDD ++R+++ N L +T A NG AL+ ++DE
Sbjct: 704 SSNGAQIKVLIVDDEPINRQVLINNLSLYNYAITEASNGQEALK---IIDE--------- 751
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
G +L++ D MP MTGYE+ KKI++ E+P+V+++++N I E E GA +
Sbjct: 752 -GFLPDLILLDVMMPRMTGYEVCKKIRDRFPSYELPIVMLTAKNQVADIVEGFESGANDY 810
Query: 135 MLKPLKPSD-VKKLTGHL 151
+ KP++ + + ++ HL
Sbjct: 811 LCKPIQKQEMLARIKTHL 828
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
V+ V++ R++V LL+ +V AENG A +L ++ QNN ++LV
Sbjct: 82 VMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYL-----EDLQNN-------IDLV 129
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + + +CL +GA F++KPL+ +
Sbjct: 130 LTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKN 189
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 190 ELKNLWQHVW 199
>gi|15601845|ref|NP_233476.1| chemotaxis protein CheY [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585901|ref|ZP_01675694.1| chemotaxis protein CheY [Vibrio cholerae 2740-80]
gi|121728512|ref|ZP_01681536.1| chemotaxis protein CheY [Vibrio cholerae V52]
gi|153215675|ref|ZP_01950071.1| chemotaxis protein CheY [Vibrio cholerae 1587]
gi|153801274|ref|ZP_01955860.1| chemotaxis protein CheY [Vibrio cholerae MZO-3]
gi|153827833|ref|ZP_01980500.1| chemotaxis protein CheY [Vibrio cholerae 623-39]
gi|227120288|ref|YP_002822183.1| chemotaxis protein CheY [Vibrio cholerae O395]
gi|227812659|ref|YP_002812669.1| chemotaxis protein CheY [Vibrio cholerae M66-2]
gi|254284716|ref|ZP_04959683.1| chemotaxis protein CheY [Vibrio cholerae AM-19226]
gi|254850253|ref|ZP_05239603.1| chemotaxis protein CheY [Vibrio cholerae MO10]
gi|297579867|ref|ZP_06941794.1| chemotaxis protein CheY [Vibrio cholerae RC385]
gi|298499856|ref|ZP_07009662.1| chemotaxis protein CheY [Vibrio cholerae MAK 757]
gi|9658542|gb|AAF96988.1| chemotaxis protein CheY [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|50872121|dbj|BAD34539.1| cheY homolog [Vibrio cholerae]
gi|121549837|gb|EAX59857.1| chemotaxis protein CheY [Vibrio cholerae 2740-80]
gi|121629230|gb|EAX61668.1| chemotaxis protein CheY [Vibrio cholerae V52]
gi|124114658|gb|EAY33478.1| chemotaxis protein CheY [Vibrio cholerae 1587]
gi|124123189|gb|EAY41932.1| chemotaxis protein CheY [Vibrio cholerae MZO-3]
gi|148876678|gb|EDL74813.1| chemotaxis protein CheY [Vibrio cholerae 623-39]
gi|150425501|gb|EDN17277.1| chemotaxis protein CheY [Vibrio cholerae AM-19226]
gi|227011801|gb|ACP08012.1| chemotaxis protein CheY [Vibrio cholerae M66-2]
gi|227015738|gb|ACP11947.1| chemotaxis protein CheY [Vibrio cholerae O395]
gi|254845958|gb|EET24372.1| chemotaxis protein CheY [Vibrio cholerae MO10]
gi|297535513|gb|EFH74347.1| chemotaxis protein CheY [Vibrio cholerae RC385]
gi|297541837|gb|EFH77888.1| chemotaxis protein CheY [Vibrio cholerae MAK 757]
Length = 125
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + L+++ +V TA +G AL + + +++
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALA--------------KAQKARFDVI 55
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP MTG+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 56 ISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 115
Query: 143 DVKK 146
+ K
Sbjct: 116 TLLK 119
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|421593718|ref|ZP_16038241.1| response regulator receiver protein [Rhizobium sp. Pop5]
gi|403700280|gb|EJZ17492.1| response regulator receiver protein [Rhizobium sp. Pop5]
Length = 262
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TAENG +ALE L + L
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEIL-------------KANRDIGL 175
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 176 MITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 233
>gi|218191229|gb|EEC73656.1| hypothetical protein OsI_08184 [Oryza sativa Indica Group]
Length = 54
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 45/53 (84%)
Query: 100 IKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
++ESS +K++PV ++SSEN+PTRI+ CLEEGA+ F++KP++PSDV +L ++
Sbjct: 1 MQESSKLKKIPVAIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRVL 53
>gi|323496265|ref|ZP_08101323.1| chemotaxis protein CheY [Vibrio sinaloensis DSM 21326]
gi|323318542|gb|EGA71495.1| chemotaxis protein CheY [Vibrio sinaloensis DSM 21326]
Length = 119
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDS+ R++V + L+++ V TA +G AL + GTK ++V
Sbjct: 4 ILAVDDSVSIRQMVSHTLRDAGYDVETANDGRDALSKI--------------TGTKFDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
I+D MP M G+EL+K ++E K VP++++++E + + GA +++KP P
Sbjct: 50 ISDVNMPNMGGFELVKALREKPQYKFVPILMLTTETSADKKMQGKSAGATGWLVKPFNP 108
>gi|344344232|ref|ZP_08775096.1| CheA signal transduction histidine kinase [Marichromatium
purpuratum 984]
gi|343804189|gb|EGV22091.1| CheA signal transduction histidine kinase [Marichromatium
purpuratum 984]
Length = 722
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 14/116 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS+ R+I +LL++S +VT AE+G+ AL D+ ++Q + +
Sbjct: 604 HVLVVDDSLNTREIERDLLESSGYRVTLAEDGLEAL------DKAQRQ--------RFDA 649
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
V++D MPG+ G+ L +++E+S + P+V+VSS +E GA +++K
Sbjct: 650 VVSDVEMPGLDGFSLTARLRENSDYRATPIVIVSSRADEADRRRGIEVGANAYIVK 705
>gi|206889988|ref|YP_002248238.1| chemotaxis protein histidine kinase CheA, [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741926|gb|ACI20983.1| chemotaxis protein histidine kinase CheA, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 742
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDSI RK ++++L+ +V TA++G+ AL L ++N KV++V
Sbjct: 624 VLVVDDSISVRKTLQSVLEAKKLRVYTAKDGVEALNLL-------ERN-------KVDMV 669
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP M GYEL+ ++++ + K +P++V++S + E GA +++KP
Sbjct: 670 VTDLEMPVMHGYELISRLRKDARFKNLPIIVLTSRGTKKHEEKAFELGADGYIVKPFDEK 729
Query: 143 DVKK 146
+++
Sbjct: 730 TIEE 733
>gi|237654348|ref|YP_002890662.1| CheA signal transduction histidine kinase [Thauera sp. MZ1T]
gi|237625595|gb|ACR02285.1| CheA signal transduction histidine kinase [Thauera sp. MZ1T]
Length = 1907
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 14 SSSNPKP---PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN 70
++ P P P V+ VDDS+ RKI LL+ +V TA++G+ ALE L+D
Sbjct: 1775 AAEAPPPLHLPTVMVVDDSLTVRKITGRLLEREGYRVLTAKDGVDALE--QLID------ 1826
Query: 71 NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEG 130
K ++V+TD MP M G++L++ I+ + + ++PVVV++S LE G
Sbjct: 1827 ------LKPDVVLTDIEMPRMDGFDLVRNIRADARLHDLPVVVITSRLAEKHRRYALEVG 1880
Query: 131 AQMFMLKPLKPSDVKKLTG 149
A ++ KP + ++ L
Sbjct: 1881 ADHYLGKPYQEEELLALVA 1899
>gi|403381658|ref|ZP_10923715.1| two-component hybrid sensor and regulator [Paenibacillus sp. JC66]
Length = 1052
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 10 SSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ 69
SSS+ H+LAVDD V+ K++ ++L+ + TA +G+ ALE L
Sbjct: 712 SSSTPLVAKGTVHILAVDDDPVNLKVLTSILEKDEFHIETASSGVEALERL--------- 762
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
N +L+I D MP M+GY+ K+++E + E+PV+++++ + P I
Sbjct: 763 -----NERPWDLLIVDVMMPYMSGYDFTKRVREEFSISELPVLLLTARSQPQDIYTGFLS 817
Query: 130 GAQMFMLKPLKPSDVKKLTGHLI 152
GA ++ KP+ +++ G L+
Sbjct: 818 GANDYVTKPVDALELQYRVGALV 840
>gi|86358137|ref|YP_470029.1| two-component response regulator protein [Rhizobium etli CFN 42]
gi|86282239|gb|ABC91302.1| two-component response regulator protein [Rhizobium etli CFN 42]
Length = 262
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TAENG +ALE L + L
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEIL-------------KANRDIGL 175
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 176 MITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 233
>gi|254412597|ref|ZP_05026370.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180332|gb|EDX75323.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 1116
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDD + +++ N L +T A + + ALE + L G K +L
Sbjct: 711 HILIVDDEPTNLQVIVNHLSLQNYAITQASSALEALELIRL-------------GFKPDL 757
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP-LK 140
++ D MP MTGYEL KK++E + E+P+V+++++N + + E GA ++ KP LK
Sbjct: 758 ILLDIMMPQMTGYELCKKLREQFLPNELPIVLLTAKNQISDLVEGFAVGANDYLTKPVLK 817
Query: 141 PSDVKKLTGHL 151
+ ++ HL
Sbjct: 818 NELLARIKTHL 828
>gi|428214364|ref|YP_007087508.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
gi|428002745|gb|AFY83588.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
Length = 121
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ LLK S VT A +G+ ALE + QE T +LV
Sbjct: 4 VLVVEDSVTQREMISTLLKESGLNVTVASDGLEALERI-----QE---------TCPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K K VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKADPKTKNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DVKKLTGHLIN 153
++ L+
Sbjct: 110 ELVGTVKQLLR 120
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|415942145|ref|ZP_11555873.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
gi|407758932|gb|EKF68696.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
Length = 133
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
H L VDD R+IV LLK K+ A++G AL+ L S + +
Sbjct: 7 HFLVVDDFSTMRRIVSGLLKELEYTKIVEADDGSTALKIL------------ESGASNIT 54
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
V+TD+ MP M G LLKKI+ S + +PV+++++E I +EGA +++KP
Sbjct: 55 FVLTDWNMPVMDGLTLLKKIRSSPALAHLPVLMITAEAKKENIVMAAQEGADGYIVKPFN 114
Query: 141 PSDVKK 146
+ +K+
Sbjct: 115 AATLKE 120
>gi|48374222|gb|AAT41921.1| putative chemotaxis protein [Fremyella diplosiphon Fd33]
Length = 121
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ ALE + T +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHASDGVEALEAI--------------QSTPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|423072882|ref|ZP_17061631.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
gi|361856377|gb|EHL08284.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
Length = 1016
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDD + +++ L N V A NG+ ALE L + + ++LV
Sbjct: 690 LLAVDDDSANLQVLARLFANEPYNVLWATNGLEALELL-------------KSRSDIDLV 736
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M+GYE+ ++I+ + E+PV++++ + P I + GA FM+KP
Sbjct: 737 LLDVMMPRMSGYEVCREIRRQFSLFELPVILLTVRHSPGDIAAGFKAGANDFMIKPFDAL 796
Query: 143 DVKKLTGHLI 152
+V+ T L+
Sbjct: 797 EVRARTETLL 806
>gi|219667618|ref|YP_002458053.1| signal transduction histidine kinase LytS [Desulfitobacterium
hafniense DCB-2]
gi|219537878|gb|ACL19617.1| signal transduction histidine kinase, LytS [Desulfitobacterium
hafniense DCB-2]
Length = 1016
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDD + +++ L N V A NG+ ALE L + + ++LV
Sbjct: 690 LLAVDDDSANLQVLARLFANEPYNVLWATNGLEALELL-------------KSRSDIDLV 736
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M+GYE+ ++I+ + E+PV++++ + P I + GA FM+KP
Sbjct: 737 LLDVMMPRMSGYEVCREIRRQFSLFELPVILLTVRHSPGDIAAGFKAGANDFMIKPFDAL 796
Query: 143 DVKKLTGHLI 152
+V+ T L+
Sbjct: 797 EVRARTETLL 806
>gi|113476924|ref|YP_722985.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110167972|gb|ABG52512.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1207
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 13/139 (9%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
V +SS SSS +L VDD V+ ++ N L +V A NG +AL+ L
Sbjct: 724 VQTSSLPSSSKKESEFQILIVDDEPVNLTLLSNQLSLHNYQVIQANNGQKALDILA---- 779
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
Q+ L +L++ D MPGMTGYE+ +K++E+ ++ ++P+++++++N + +
Sbjct: 780 ---QDFLP------DLILLDVMMPGMTGYEVTQKVRETWLLHQLPIIMLTAKNRVSDLVM 830
Query: 126 CLEEGAQMFMLKPLKPSDV 144
LE GA ++ KP ++
Sbjct: 831 GLEVGANDYLSKPFHKKEL 849
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|428312293|ref|YP_007123270.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
gi|428253905|gb|AFZ19864.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
Length = 353
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P+ VL VDD+ +R ++ ++ VT AE+G++ALE + QE
Sbjct: 3 PEQGRVLVVDDNEANRDLLARRVRRQGHTVTVAEDGIKALELMA----QE---------- 48
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+LV+ D MP M GY++L+ +K ++ +PV+V+S+ + + EC+E GA+ ++ K
Sbjct: 49 PFDLVLLDIMMPKMNGYQVLEHLKNDPNLRHIPVIVISAVDDINSVVECIELGAEDYLPK 108
Query: 138 PL 139
P
Sbjct: 109 PF 110
>gi|406877649|gb|EKD26809.1| Sensor protein [uncultured bacterium]
Length = 388
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 14/121 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K +L VDD + +++L+K+ + TA+NG +ALE ++S
Sbjct: 12 KDSKILIVDDKEANLLFIKDLIKSFGFRTVTAKNGRQALE------------KIDSENP- 58
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LV+ D MP M G+E+LK++K+ S++ +PVVV+S+ + I EC++ GA +++KP
Sbjct: 59 -DLVLLDIMMPEMDGFEVLKQLKQKSILYSLPVVVISAIDDMENIAECIKLGATDYLVKP 117
Query: 139 L 139
Sbjct: 118 F 118
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PVV++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|269791972|ref|YP_003316876.1| CheA signal transduction histidine kinase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099607|gb|ACZ18594.1| CheA signal transduction histidine kinase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 695
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 2 DACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
D+ SS+ + ++ P +L V+DS+ R ++ NL+ + +VTTA +G A E +
Sbjct: 557 DSSPHGSSAGQGAQADQGPKRILVVEDSVTSRALLRNLMTSLGYQVTTAADGQEAWEVI- 615
Query: 62 LVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPT 121
+ +LVITD MP M G+EL ++IK S ++ +PV++V+S P
Sbjct: 616 -------------SRDPHHLVITDVEMPRMDGFELTRRIKGSPALRSIPVILVTSLESPE 662
Query: 122 RINECLEEGA 131
+ +E GA
Sbjct: 663 DVQRGIEAGA 672
>gi|334131795|ref|ZP_08505557.1| Chemotaxis protein CheY [Methyloversatilis universalis FAM5]
gi|333443268|gb|EGK71233.1| Chemotaxis protein CheY [Methyloversatilis universalis FAM5]
Length = 132
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
S+PK L VDD R+IV NLLK V AE+G+ AL+ L
Sbjct: 2 SDPKM-KFLVVDDFSTMRRIVRNLLKELGFTNVDEAEDGVIALQKL-------------- 46
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+ + V+TD+ MP MTG ELL+ I+ + +K +PV+++++E I E + GA +
Sbjct: 47 KAAEFDFVVTDWNMPNMTGIELLRAIRADAALKSLPVLMITAEAKKENIIEAAQAGASGY 106
Query: 135 MLKPL 139
++KP
Sbjct: 107 IVKPF 111
>gi|417860505|ref|ZP_12505561.1| two component response regulator [Agrobacterium tumefaciens F2]
gi|338823569|gb|EGP57537.1| two component response regulator [Agrobacterium tumefaciens F2]
Length = 430
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD+ R + +L+ +V+ A +G RALE L S + LV
Sbjct: 126 VLVVDDARTARSGLVEILERQNFRVSEAHSGKRALEIL-------------SQDPSIQLV 172
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITDY MP M GYEL ++I++SS +++ V+ +SS L+ GA F+ +P P
Sbjct: 173 ITDYHMPDMDGYELTRRIRDSSSSEDLRVIGISSSTDRLLSASFLKAGASDFVYRPFVPE 232
Query: 143 DVK 145
+++
Sbjct: 233 ELQ 235
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD+ V+R ++ L+ VT AE+G++ALE L +LV
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEML--------------RSDPFDLV 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ D MP M GY++L+ +K ++ +PV+++S+ + I C+E GA+ ++ KP P
Sbjct: 54 LLDIMMPQMNGYQVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKPFNP 112
>gi|329908335|ref|ZP_08274848.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Oxalobacteraceae
bacterium IMCC9480]
gi|327546732|gb|EGF31677.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Oxalobacteraceae
bacterium IMCC9480]
Length = 152
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 24 LAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
L VDD R+I+ LLK K+ AE+G AL L Q Q ++G ++ V
Sbjct: 25 LVVDDFSTMRRIISGLLKEIGHSKIHEAEDGAAALRLL-----QSAQ----THGVPIDFV 75
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD+ MP M G ELLK+I+ + +PV++V++E+ I GA +++KP +
Sbjct: 76 ITDWNMPVMDGLELLKRIRLDPALNHLPVLMVTAESKKENIIAAAHAGADGYIVKPFTAA 135
Query: 143 DVKK 146
+K+
Sbjct: 136 TLKE 139
>gi|302343447|ref|YP_003807976.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301640060|gb|ADK85382.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 121
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 18/130 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS+ R ++ +L+ + V TA +G L+ L +V+L
Sbjct: 4 RILVVDDSLTIRNLLSMVLRQNGHDVVTAGDGFEGLQQLA--------------AHRVDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G +KKI+++ +PV+++S+E I+ ++ GA +++KP+ P
Sbjct: 50 IISDLNMPRMDGLSFIKKIRQNDSTSAIPVILLSTEKASRDIDNAMDAGASKYLVKPVLP 109
Query: 142 ----SDVKKL 147
++VKKL
Sbjct: 110 AVLAAEVKKL 119
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 36 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 81
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 82 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 141
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 142 NELKNLWAHVW 152
>gi|307731387|ref|YP_003908611.1| response regulator receiver protein [Burkholderia sp. CCGE1003]
gi|307585922|gb|ADN59320.1| response regulator receiver protein [Burkholderia sp. CCGE1003]
Length = 125
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+LA+DDS R+I+ L + +VT A +G LE N+ + +L
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE--------------NALAMRFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD MPG TG +L+ +++ + KE P++V+++E+ E GA ++ KPL P
Sbjct: 50 VLTDQHMPGKTGLDLIAELRGNPAYKETPILVLTTESGEPFKAAAREAGATGWIEKPLDP 109
Query: 142 SDVKKLTGHL 151
+ +L L
Sbjct: 110 DLLTELVAAL 119
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|392308689|ref|ZP_10271223.1| response regulator receiver protein [Pseudoalteromonas citrea NCIMB
1889]
Length = 122
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R++V L + V +G AL L NGTK++L+
Sbjct: 5 ILIVDDSDSLRQVVNIALTGAGYTVIEGRDGKDALAKL--------------NGTKIHLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G E +K+ K+ K PVV++++EN + E + GA+ +M+KP KP+
Sbjct: 51 ISDVNMPNMNGIEFVKQAKQLPQYKFTPVVMLTTENQQHMMEEGKKAGAKAWMVKPFKPA 110
Query: 143 DVKKLTGHLIN 153
+ + L++
Sbjct: 111 QMLQAVAKLLS 121
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|428210719|ref|YP_007083863.1| serine phosphatase RsbU, regulator of sigma subunit [Oscillatoria
acuminata PCC 6304]
gi|427999100|gb|AFY79943.1| serine phosphatase RsbU, regulator of sigma subunit [Oscillatoria
acuminata PCC 6304]
Length = 970
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 26/153 (16%)
Query: 12 SSSSSNPKP--PHVLA----------VDDSIVDRKIVENLLKNSACKVTTAENGMRALEF 59
+++ NP+P P V+A VDD ++ +++ N+L V A+NG+ ALE
Sbjct: 574 ATADLNPEPLEPRVIASHKGSAKLLIVDDEPINLQVLVNMLSLQNYTVIQAKNGLDALEL 633
Query: 60 LGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENI 119
L G K +LV+ D MP MTGYE+ +KI+E+ E+PV++++++N
Sbjct: 634 L-------------HKGFKPDLVLLDVMMPKMTGYEVTQKIRETWQASEMPVLLLTAKNQ 680
Query: 120 PTRINECLEEGAQMFMLKPLKPSD-VKKLTGHL 151
+ + E GA ++ KP++ + + ++ HL
Sbjct: 681 LSDLVAGFESGANDYLTKPVEKDELLARIKTHL 713
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|269793336|ref|YP_003318240.1| response regulator receiver modulated metal dependent
phosphohydrolase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100971|gb|ACZ19958.1| response regulator receiver modulated metal dependent
phosphohydrolase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 373
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P + VDDS+++ +I+ +L +V T N ALE + +
Sbjct: 10 PAIYVVDDSVMNLQILGEVLGMQGYEVRTFPNPRDALE--------------RAAEDPPD 55
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L I D +PGM G+EL +++K+ +++E+PV+ VSS + P I+ EG ++ KP +
Sbjct: 56 LFILDVVLPGMDGFELCRRLKQREILREIPVMFVSSLDDPHHISRAFLEGGVDYVAKPFR 115
Query: 141 PSDV 144
P ++
Sbjct: 116 PEEI 119
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 36 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 81
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 82 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 141
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 142 NELKNLWAHVW 152
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 36 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 81
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 82 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 141
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 142 NELKNLWAHVW 152
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|373485922|ref|ZP_09576602.1| response regulator receiver [Holophaga foetida DSM 6591]
gi|372012760|gb|EHP13322.1| response regulator receiver [Holophaga foetida DSM 6591]
Length = 124
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L+VDDS R+I+ + + AENG++AL+ L + ++L+
Sbjct: 4 ILSVDDSATMRRIIGRAVAVMGYEFLEAENGLQALDLL------------PQHAPDLDLI 51
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D MP M G+E L +IK + K +PV++V++E+ TRI + ++ GA ++ KP
Sbjct: 52 ILDVNMPEMDGFETLTRIKADARYKNIPVMMVTTESDRTRIVQAIQAGAANYVTKPFNQE 111
Query: 143 DV 144
D+
Sbjct: 112 DL 113
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 35 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 80
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 81 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 140
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 141 NELKNLWAHVW 151
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 35 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 80
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 81 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 140
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 141 NELKNLWAHVW 151
>gi|315644147|ref|ZP_07897317.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315280522|gb|EFU43811.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 1048
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 14/125 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDD V+ +++E +L VT A +G E L ++D QE +
Sbjct: 720 PRLLIVDDDPVNLQVLEAILPPDEYDVTMATSGK---EVLAVLDAQEW-----------D 765
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVI+D MP M+GYEL ++I+E + E+PV+++++ + P I GA ++ KP++
Sbjct: 766 LVISDIMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 825
Query: 141 PSDVK 145
+++
Sbjct: 826 AIEIR 830
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|34496471|ref|NP_900686.1| chemotaxis protein CheY [Chromobacterium violaceum ATCC 12472]
gi|34102324|gb|AAQ58690.1| chemotaxis protein CheY [Chromobacterium violaceum ATCC 12472]
Length = 122
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R++V L + +V A NG AL+ L +G K++L+
Sbjct: 5 ILIVDDSTTLRQVVRMTLAGAGYEVLEAGNGKEALDIL--------------DGRKIHLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
I+D MP M G LLK IK+ K PV+++++E+ + E E GA+ +++KP +P
Sbjct: 51 ISDVNMPQMDGLALLKNIKQLPHYKFTPVIMLTTESAEDKKREGKEAGAKAWVVKPFQP 109
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|218778514|ref|YP_002429832.1| response regulator receiver protein [Desulfatibacillum alkenivorans
AK-01]
gi|218759898|gb|ACL02364.1| Response regulator receiver domain protein (CheY-like)
[Desulfatibacillum alkenivorans AK-01]
Length = 124
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
VL VDD R+IV+N+LK+ ++ AE+G AL+ L V+
Sbjct: 6 KVLVVDDFATMRRIVKNILKDIGFTNISEAEDGAVALKQL--------------QAAPVD 51
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+I D+ MP M+G +LLK ++ +K P V+V++E TR+ E ++ G +++KP
Sbjct: 52 LIICDWNMPNMSGLDLLKAVRADEKLKATPFVMVTAEAQKTRVVEAVQAGVSNYIVKPFT 111
Query: 141 PSDVKK 146
VK+
Sbjct: 112 ADAVKE 117
>gi|391231317|ref|ZP_10267523.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
gi|391220978|gb|EIP99398.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
Length = 502
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
+S+S P P +L VDD+ +R ++ L+ V TA +G ALE L
Sbjct: 103 SSASFPQDRPAPVPGRILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERL------ 156
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
+LV+ D MP + GY L IK V++ +PV+++S+ + + C
Sbjct: 157 --------RAGPFDLVLLDMMMPVLDGYGALDAIKTDPVLRHLPVIMISALDELASVVRC 208
Query: 127 LEEGAQMFMLKPLKPSDVKKLTG 149
+E GA+ F+ KP P+ ++ G
Sbjct: 209 IERGAEDFLPKPFNPTLLRARIG 231
>gi|113477573|ref|YP_723634.1| periplasmic sensor hybrid histidine kinase [Trichodesmium
erythraeum IMS101]
gi|110168621|gb|ABG53161.1| periplasmic sensor hybrid histidine kinase [Trichodesmium
erythraeum IMS101]
Length = 750
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VD+ +R ++ NLL+ V AENG L +N + NL+
Sbjct: 534 LLVVDNKWENRSVIVNLLEPLKFNVIEAENGEDGLN--------------KANKFRPNLI 579
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP M GYE +K I+ S ++K +PV+V S+ I T + L+ G F+ KP+
Sbjct: 580 ITDLMMPVMDGYEFMKHIRTSEILKPIPVIVSSASVISTVRQKSLDAGGDGFLEKPVGSD 639
Query: 143 DVKKL 147
++ KL
Sbjct: 640 ELFKL 644
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|428214819|ref|YP_007087963.1| transmembrane sensor domain-containing protein [Oscillatoria
acuminata PCC 6304]
gi|428003200|gb|AFY84043.1| putative transmembrane sensor domain protein [Oscillatoria
acuminata PCC 6304]
Length = 1108
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 13/122 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD ++ +++ N L +T A NG++ALE + NG K +L+
Sbjct: 699 ILIVDDEPINLQVLANTLSLQNYAITRAANGLKALEII-------------ENGFKPDLI 745
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP MTGYE+ +KI++ ++P+V+++++N + + E GA +++KP +
Sbjct: 746 LLDVMMPRMTGYEVCEKIRQKFAAIDLPIVMLTAKNQVSDLVEGFSAGANDYLMKPFNKN 805
Query: 143 DV 144
++
Sbjct: 806 EL 807
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 35 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 80
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 81 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 140
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 141 NELKNLWAHVW 151
>gi|399019500|ref|ZP_10721648.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
gi|398098110|gb|EJL88403.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
Length = 231
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
+++ S P+P +L VDDS R ++E LK C VTTA++GM L + V+
Sbjct: 2 TTTLSAPEP-LILVVDDSATSRVVIEKQLKKLGCNVTTAQDGMSGLAAMAKVE------- 53
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKE---VPVVVVSSENIPTRINECLE 128
+LV+ D MP M+GY++ ++++ +E P+V +S+E + CL+
Sbjct: 54 -------FDLVLLDCQMPDMSGYDVAMQVRKREREEESAHTPIVAISAETDAAHMQMCLD 106
Query: 129 EGAQMFMLKPLKPSDVKKL 147
G + KPL ++KK+
Sbjct: 107 SGMDGVLGKPLPVDELKKI 125
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 87
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 88 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 147
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 148 NELKNLWAHVW 158
>gi|430003927|emb|CCF19718.1| Response regulator receiver protein [Rhizobium sp.]
Length = 278
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TAE+G +ALE L + + L
Sbjct: 143 HVLIVDDSPTARALLTSRLKRYNFRVSTAESGAKALEIL-------------KSNPDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
V+TDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 190 VVTDYNMPDIDGFELTRRIRSARGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|376003885|ref|ZP_09781685.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
gi|375327705|emb|CCE17438.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
Length = 352
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N P VL VDD+ ++R ++ L+ V A NG AL+ +
Sbjct: 2 NAHPDLVLIVDDNEINRDLLARRLQRQGYDVLVASNGFEALKIM--------------RS 47
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
T ++LV+ D MP M GY++L+ +K ++ +PV+++S+ N I C+E GA+ ++
Sbjct: 48 TALDLVLLDIMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLS 107
Query: 137 KPL 139
KP
Sbjct: 108 KPF 110
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +V NG +A + L E NN +LV
Sbjct: 76 VLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKIL------EDMNN------HTDLV 123
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI+ ++ +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 124 LTEVVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKN 183
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 184 ELKNLWQHVW 193
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 85
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 86 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 145
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 146 NELKNLWAHVW 156
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 36 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 81
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 82 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 141
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 142 NELKNLWAHVW 152
>gi|224370519|ref|YP_002604683.1| putative chemotaxis response regulator receiver (CheY-like)
[Desulfobacterium autotrophicum HRM2]
gi|223693236|gb|ACN16519.1| putative chemotaxis response regulator receiver (CheY-like)
[Desulfobacterium autotrophicum HRM2]
Length = 141
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 17/128 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSA---CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
+L VDDS+ R +++ L+ + ++ A NG ALE + + V
Sbjct: 5 ILIVDDSLPMRSVIKRTLRAAGYGTSELLEAANGQEALELM--------------KNSWV 50
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++V+TDY MP M G E +K IK + + K++PVVV+S+E ++I E ++ GA ++ KP
Sbjct: 51 DIVMTDYNMPVMDGLEFIKTIKSNELSKDIPVVVISTEGNASKIKEFMDCGAAGYITKPF 110
Query: 140 KPSDVKKL 147
++ L
Sbjct: 111 TAEVIRDL 118
>gi|408794441|ref|ZP_11206046.1| response regulator receiver domain protein [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408461676|gb|EKJ85406.1| response regulator receiver domain protein [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 121
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +DDS V RKI+ LKN+ + A +G+ L+ L +N +V+L+
Sbjct: 5 ILIIDDSAVFRKIISVHLKNANFDLVEAGDGLEGLK------------QLETN--EVDLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
++D MP M G +KK+KE+ K P++++++E+ P + + ++ GA+ ++ KP P
Sbjct: 51 VSDMNMPNMDGISFIKKVKENPKYKFTPIIMLTTESQPEKKQQGMDAGAKAWLTKPFSPE 110
Query: 143 DV 144
++
Sbjct: 111 EL 112
>gi|398388403|ref|XP_003847663.1| hypothetical protein MYCGRDRAFT_78016 [Zymoseptoria tritici IPO323]
gi|339467536|gb|EGP82639.1| hypothetical protein MYCGRDRAFT_78016 [Zymoseptoria tritici IPO323]
Length = 962
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
AS S+ + +P P H+L +D+IV+++I+ L++ C VT A +G ALE L D +
Sbjct: 805 ASPISAKNGHSPAPQHILLCEDNIVNQRILAKQLRSKGCTVTVANHGQEALEILEKSDWR 864
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKE----VPVVVVSSENIPTR 122
+ ++ + +++V+ D+ MP M G + +KI+E E +PV+ +++ +
Sbjct: 865 CDKPAADT--SSIDVVLLDWEMPIMNGLQCCQKIREFETSGEANRRLPVIAITANVRQAQ 922
Query: 123 INECLEEGAQMFMLKPLKPSDV 144
I E + G + KP +++
Sbjct: 923 IEEAMAAGMDTVVPKPFTVTEL 944
>gi|300310884|ref|YP_003774976.1| chemotaxis regulator protein [Herbaspirillum seropedicae SmR1]
gi|300073669|gb|ADJ63068.1| chemotaxis regulator transmits chemoreceptor signals to flagellar
motor components protein [Herbaspirillum seropedicae
SmR1]
Length = 133
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
H L VDD R+IV LLK K+ A++G AL+ L S + +
Sbjct: 7 HFLVVDDFSTMRRIVSGLLKELEYTKIVEADDGSSALKIL------------ESGASNIT 54
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
V+TD+ MP M G LLKKI+ + + +PV+++++E I +EGA +++KP
Sbjct: 55 FVLTDWNMPVMDGLTLLKKIRSTPALSHLPVLMITAEAKKENIVMAAQEGADGYIVKPFN 114
Query: 141 PSDVKK 146
+ +K+
Sbjct: 115 ATTLKE 120
>gi|73537902|ref|YP_298269.1| PAS/PAC sensor hybrid histidine kinase [Ralstonia eutropha JMP134]
gi|72121239|gb|AAZ63425.1| PAS/PAC sensor hybrid histidine kinase [Ralstonia eutropha JMP134]
Length = 1284
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 21 PH--VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
PH VL V+D+ ++R++ +LL+ + TAENG ALE L + D
Sbjct: 925 PHARVLLVEDNEINREVATHLLQQAGITPDTAENGAIALELLAVQD-------------- 970
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LV+ D MP M G+E + I+ + + +PVV +++ +P N CL G + KP
Sbjct: 971 YDLVLMDMQMPVMDGFEATRHIRANPRLASMPVVAMTANALPEDRNRCLAAGMDDHIAKP 1030
Query: 139 LKPS 142
+ P+
Sbjct: 1031 ISPA 1034
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD R+++ ++L+ + E+G +AL + D + + V
Sbjct: 780 LLVVDDHGYARQVIGSMLRGFGFRADEVESGEKALSAIQHAD---------AIADPYHAV 830
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVP-VVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
D+ MPG+ G + ++K+ S+ + P +++++ + E G + + KP+ P
Sbjct: 831 FIDWRMPGLDGIQTVRKLAAMSLQSQRPRPLMITANGREEVVREGERNGFETTLHKPVSP 890
Query: 142 S 142
S
Sbjct: 891 S 891
>gi|304321015|ref|YP_003854658.1| sensor histidine kinase/response regulator [Parvularcula
bermudensis HTCC2503]
gi|303299917|gb|ADM09516.1| sensor histidine kinase/response regulator [Parvularcula
bermudensis HTCC2503]
Length = 517
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 15/139 (10%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
S P VL VDD ++R++ LL++S C + AENG AL+ L
Sbjct: 379 SIPAGLKVLIVDDIGLNRQVARLLLQSSGCVCSEAENGQEALDMLA-------------- 424
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESS-VMKEVPVVVVSSENIPTRINECLEEGAQMF 134
G +++V+ D MP M G+E +++I+ESS +VPV+ +S++ R E E+G F
Sbjct: 425 GGPIDIVLMDLHMPTMDGFEAVRRIRESSEAWGDVPVIALSADEAARRDGELGEKGFNGF 484
Query: 135 MLKPLKPSDVKKLTGHLIN 153
+ KP+ + + + ++N
Sbjct: 485 IAKPVSEARLLEAISDVLN 503
>gi|209528443|ref|ZP_03276873.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|423063642|ref|ZP_17052432.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
gi|209491122|gb|EDZ91547.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|406715074|gb|EKD10232.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
Length = 352
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N P VL VDD+ ++R ++ L+ V A NG AL+ +
Sbjct: 2 NAHPDLVLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM--------------RS 47
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
T ++LV+ D MP M GY++L+ +K ++ +PV+++S+ N I C+E GA+ ++
Sbjct: 48 TALDLVLLDIMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLS 107
Query: 137 KPL 139
KP
Sbjct: 108 KPF 110
>gi|373458202|ref|ZP_09549969.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
gi|371719866|gb|EHO41637.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
Length = 748
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N K +VL +DD+ ++R + +L+ + +VTTAE+ +ALE L
Sbjct: 478 NLKGLNVLLIDDNPINRSYFQKILEKNKLQVTTAESAFKALEIL-------------KTN 524
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
+ +L+ITD MP M G+EL +I+ K+VP+++++S + C + G ++
Sbjct: 525 QRFDLIITDAQMPEMDGFELSTQIRALKNYKKVPIILLTSSGMRGDSERCKQIGINAYLP 584
Query: 137 KPLKPSDVKK 146
KP+K +D K
Sbjct: 585 KPVKLTDFLK 594
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L +D+ V++K+ LL+ + A+NG+ LE L ++N+ +L
Sbjct: 626 HILVAEDNPVNQKLAIRLLEKNGYYADIAKNGLEVLEKL-------KKNHY-------DL 671
Query: 82 VITDYCMPGMTGYELLKKIKESSVMK-EVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
++ D MP M G + +KI+E K +P++ +++ + I+ CL ++ KP++
Sbjct: 672 ILMDVQMPEMDGLQATQKIRELENGKSHIPIIALTAHAMKKDIDMCLNAAMDGYVSKPIR 731
Query: 141 PSDVKK 146
++ K
Sbjct: 732 KEELFK 737
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD+ V+R ++ L+ VT AE+G++ALE L +LV
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEML--------------RRDPFDLV 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ D MP M GY++L+ +K ++ +PV+++S+ + I C+E GA+ ++ KP P
Sbjct: 54 LLDIMMPQMNGYQVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKPFNP 112
>gi|261408948|ref|YP_003245189.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261285411|gb|ACX67382.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1049
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
+ S + + + P +L VDD V+ K++ +LL + ++ T RA E L L+++ E
Sbjct: 706 AESEALALARPSDGRLLIVDDDPVNLKVIHHLLADEGYRIVTV---TRAEEALQLLEQGE 762
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+L+I+D MP M+GYEL + I++ ++ E+P++++++ N P I+
Sbjct: 763 W-----------DLIISDVMMPQMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGF 811
Query: 128 EEGAQMFMLKPLKPSDVK 145
GA +++KP+ ++K
Sbjct: 812 ISGANDYLIKPVDHLELK 829
>gi|384260970|ref|YP_005416156.1| Response regulator receiver domain-containing protein (CheY)
[Rhodospirillum photometricum DSM 122]
gi|378402070|emb|CCG07186.1| Response regulator receiver domain protein (CheY) [Rhodospirillum
photometricum DSM 122]
Length = 143
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 6 VASSSSSSSSSNP--KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLV 63
+AS S +S+ S+P P VL +DD I R +L+ + V A NG+ E
Sbjct: 4 IASPSGASALSSPPTGPSRVLVIDDGITMRLFYRTVLEAAGFVVEEATNGIEGYE----- 58
Query: 64 DEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI 123
+L+I D MP M GY +++ I+ + ++ VP V +S+E+
Sbjct: 59 ---------KVLAGSFDLLIVDINMPKMDGYTMMRAIRRDTAVRGVPAVTISTESSDEDA 109
Query: 124 NECLEEGAQMFMLKPLKPSDVKKL 147
+ E GA +++KP+ P + ++
Sbjct: 110 RQAFESGANFYLVKPVAPDTLTRV 133
>gi|390440283|ref|ZP_10228626.1| Two-component response regulator CheY subfamily [Microcystis sp.
T1-4]
gi|389836293|emb|CCI32752.1| Two-component response regulator CheY subfamily [Microcystis sp.
T1-4]
Length = 121
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L V+DS R+++ LL+NS KVT A +G+ ALE++ Q+ N +L
Sbjct: 3 EILLVEDSQTQRELICGLLRNSGIKVTIATDGVEALEYI-------QRGN-------PDL 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VI D MP M GYE+ +++K + + +PVV+ SS+ ++ GA +++KP +P
Sbjct: 49 VILDIVMPRMNGYEVCRRLKSDAKTQNIPVVICSSKGEVFDRYWGMKIGADAYIVKPFEP 108
>gi|407715117|ref|YP_006835682.1| two-component system, chemotaxis family, response regulator CheY
[Burkholderia phenoliruptrix BR3459a]
gi|407237301|gb|AFT87500.1| two-component system, chemotaxis family, response regulator CheY
[Burkholderia phenoliruptrix BR3459a]
Length = 125
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+LA+DDS R+I+ L + +VT A +G LE N+ + +L
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE--------------NALAVRFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD MPG TG +L+ +++ + E P++V+++E+ E GA ++ KPL P
Sbjct: 50 VLTDQHMPGKTGLDLIAELRGNPAYAETPILVLTTESGDAFKAAAREAGATGWIEKPLDP 109
Query: 142 SDVKKLTGHL 151
+ +L L
Sbjct: 110 DLLTELVAAL 119
>gi|406999383|gb|EKE17039.1| chemotaxis protein CheY [uncultured bacterium]
Length = 129
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
H L VDD R+I+ NLLK VT AE+G++AL+ L G ++
Sbjct: 7 HFLVVDDFSTMRRILRNLLKEHGFHNVTEAEDGVQALQRL--------------KGGGID 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
V+TD+ MP M G EL++ I+ + ++ +PV++V++E I + GA +++KP
Sbjct: 53 FVVTDWNMPNMDGLELIQNIRATPIISCLPVLMVTAEAKKENIIAAAQAGADGYIVKPFS 112
Query: 141 PSDVKK 146
+K+
Sbjct: 113 SQVLKE 118
>gi|239905594|ref|YP_002952333.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239795458|dbj|BAH74447.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 139
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
HVL VDD++ R +++ +LK ++ AENG A L ++
Sbjct: 16 HVLIVDDAVPMRNMIKFMLKKIGFNTLSEAENGSEAFGLL--------------KKLTID 61
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LV+ D+ MP + GY+LL+KI+ +K +PV++VS E I + GA ++LKP+
Sbjct: 62 LVVADWNMPKLNGYQLLEKIRADESLKYLPVIIVSGEGDKEHIVSIIRAGASDYVLKPI- 120
Query: 141 PSDV 144
P+D+
Sbjct: 121 PADI 124
>gi|428212579|ref|YP_007085723.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
gi|428000960|gb|AFY81803.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
Length = 354
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD +R ++ LK V AE+G++ALE + +LV
Sbjct: 8 VLVVDDVEANRDLLCRRLKRQGYHVKIAEDGLKALELI--------------RAEPFDLV 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ D MP + GY++L++IK S ++ +PV+++S+ + + +C+E GA+ ++ KP P
Sbjct: 54 LLDIMMPHLNGYQVLEEIKADSSLRHIPVIMISAVDDIDSVVKCIELGAEDYLSKPFNP 112
>gi|152996617|ref|YP_001341452.1| response regulator receiver protein [Marinomonas sp. MWYL1]
gi|150837541|gb|ABR71517.1| response regulator receiver protein [Marinomonas sp. MWYL1]
Length = 265
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSN 75
+PK VL DDS + RK V L + + AENG A+ L N
Sbjct: 142 DPKSLRVLVTDDSRMARKHVSKTLNTMGIEDIQFAENGKEAIALL--------------N 187
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+ +L++TDY MP M G EL +++ + +P+++VSS + ++++ +EG
Sbjct: 188 EMEFDLIVTDYNMPEMDGKELTDAVRKDPTIAHIPILMVSSNSEDSQLSNIAQEGVDAIC 247
Query: 136 LKPLKPSDVKKLTGHLIN 153
KP +PS V+KL ++N
Sbjct: 248 GKPFEPSVVRKLLAKILN 265
>gi|409197665|ref|ZP_11226328.1| putative two-component system sensor protein [Marinilabilia
salmonicolor JCM 21150]
Length = 1424
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 1 MDACGVASSSSSSSSSNPK----------PPHVLAVDDSIVDRKIVENLLKNSACKVTTA 50
MDA G S S K P +L V+D+ +R++ LL + A
Sbjct: 1140 MDAMGGVEFPQSEGGSKKKNYKDLLIKEEPLKLLMVEDNDTNRELTRELLAMANITTDLA 1199
Query: 51 ENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVP 110
NG AL+ +EQ+ N +LV+ D MPGM GY +++K EVP
Sbjct: 1200 VNGQEALDL-----AREQEGN-----CPYDLVLMDIHMPGMNGYTATRRMKRIEGWNEVP 1249
Query: 111 VVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
VV +++E + N+CL+ G + KP+ P D+ ++ L+
Sbjct: 1250 VVAMTAEALGDVENQCLQAGMTGLVAKPIDPDDLFRVIYRLV 1291
>gi|425091213|ref|ZP_18494298.1| hypothetical protein HMPREF1308_01473 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405613370|gb|EKB86118.1| hypothetical protein HMPREF1308_01473 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 404
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL V+DS+V R+++ +L V+ AENG+ AL L E Q V+L
Sbjct: 5 HVLIVEDSLVYRRLLSRMLTQWGYIVSEAENGVDALAIL------ENQ--------PVSL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VI+D+ MP M G L ++I+ + V ++++++ P + + E GA F+ KP++
Sbjct: 51 VISDWEMPEMNGLTLCREIRRRQFGRYVYLILLTAREDPGDLTQGFEAGADDFLSKPVEQ 110
Query: 142 SDVK 145
S+++
Sbjct: 111 SELR 114
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD KI+E+LL++ VTT +ALE L N K +LV
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALEL------------LRENKNKFDLV 66
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++S+ + P + + + GA ++LKP++
Sbjct: 67 ISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIE 123
Query: 143 DVKKLTGHLI 152
++K + H++
Sbjct: 124 ELKNIWQHVV 133
>gi|333894782|ref|YP_004468657.1| chemotaxis protein CheY [Alteromonas sp. SN2]
gi|332994800|gb|AEF04855.1| chemotaxis protein CheY [Alteromonas sp. SN2]
Length = 121
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDSI R++VE LK + VTTA++G AL D+ + Q +
Sbjct: 4 HILVVDDSISIRQMVEMTLKGAGYTVTTAQDGQEAL------DKCKSQ--------QFGF 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD MP M G L+K ++ S P+V++++E P + GA +M+KP P
Sbjct: 50 VLTDQNMPRMDGLTLIKNLRSLSGFNRTPIVMLTTEAGPEMKAKGKAAGATGWMVKPFDP 109
Query: 142 SDVKKLTGHLIN 153
+ + +T ++
Sbjct: 110 NKLLDVTKRVLG 121
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD KI+E+LL++ VTT +ALE L N K +LV
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALEL------------LRENKNKFDLV 66
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++S+ + P + + + GA ++LKP++
Sbjct: 67 ISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIE 123
Query: 143 DVKKLTGHLI 152
++K + H++
Sbjct: 124 ELKNIWQHVV 133
>gi|448299646|ref|ZP_21489655.1| response regulator receiver protein [Natronorubrum tibetense GA33]
gi|445587621|gb|ELY41879.1| response regulator receiver protein [Natronorubrum tibetense GA33]
Length = 189
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 6 VASSSSSSSSSNPK-PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
A S+ +++ P PHVL ++D RK++EN L++S + T +G FL
Sbjct: 54 TADRSADTAADRPANRPHVLLLEDDDSLRKLLENKLESSGYETTALADGRECWSFL---- 109
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
+ G +LV+ D +PG+ G+ +L +I+ ++ VP++V+SS +
Sbjct: 110 ---------ATGEPPDLVLLDVMVPGLDGFRVLGRIRNDDRLEGVPIIVLSSRGQQADVR 160
Query: 125 ECLEEGAQMFMLKPLKPS 142
+ GA+ ++ KP P+
Sbjct: 161 RGFDLGAEDYVTKPFSPA 178
>gi|228926141|ref|ZP_04089217.1| hypothetical protein bthur0010_8620 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228833506|gb|EEM79067.1| hypothetical protein bthur0010_8620 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|196037659|ref|ZP_03104970.1| sensor histidine kinase/response regulator [Bacillus cereus
NVH0597-99]
gi|196031901|gb|EDX70497.1| sensor histidine kinase/response regulator [Bacillus cereus
NVH0597-99]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|218902190|ref|YP_002450024.1| sensor histidine kinase/response regulator [Bacillus cereus AH820]
gi|218536450|gb|ACK88848.1| sensor histidine kinase/response regulator [Bacillus cereus AH820]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|52144326|ref|YP_082503.1| sensor histidine kinase [Bacillus cereus E33L]
gi|51977795|gb|AAU19345.1| sensor histidine kinase [Bacillus cereus E33L]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|402488137|ref|ZP_10834952.1| response regulator receiver protein [Rhizobium sp. CCGE 510]
gi|401813305|gb|EJT05652.1| response regulator receiver protein [Rhizobium sp. CCGE 510]
Length = 262
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AENG +ALE L + L
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSVAENGGKALEIL-------------KANRDIGL 175
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 176 MITDYNMPDIDGFELTRRIRSSIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 233
>gi|260769733|ref|ZP_05878666.1| chemotaxis regulator CheY [Vibrio furnissii CIP 102972]
gi|375133097|ref|YP_005049505.1| chemotaxis protein CheY [Vibrio furnissii NCTC 11218]
gi|260615071|gb|EEX40257.1| chemotaxis regulator CheY [Vibrio furnissii CIP 102972]
gi|315182272|gb|ADT89185.1| chemotaxis protein CheY [Vibrio furnissii NCTC 11218]
Length = 119
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDSI R++V + LK++ V TA +G AL + TK ++V
Sbjct: 4 ILAVDDSISIRQMVSHTLKDAGYDVETANDGREALT--------------KAQSTKFDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G+EL+K I+ + K +P++++++E + E GA +++KP P
Sbjct: 50 ISDVNMPNMGGFELVKAIRGNPQYKFIPILMLTTETSMEKKQEGKLAGATGWLVKPFNPD 109
Query: 143 DVKK 146
+ K
Sbjct: 110 TLLK 113
>gi|423553165|ref|ZP_17529492.1| hypothetical protein IGW_03796 [Bacillus cereus ISP3191]
gi|401184891|gb|EJQ91989.1| hypothetical protein IGW_03796 [Bacillus cereus ISP3191]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|405378877|ref|ZP_11032787.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF142]
gi|397324611|gb|EJJ28966.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF142]
Length = 276
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TAE+G +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSTAESGAKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++TDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 190 MVTDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|229120612|ref|ZP_04249857.1| hypothetical protein bcere0016_9230 [Bacillus cereus 95/8201]
gi|228662897|gb|EEL18492.1| hypothetical protein bcere0016_9230 [Bacillus cereus 95/8201]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|118476618|ref|YP_893769.1| sensor histidine kinase [Bacillus thuringiensis str. Al Hakam]
gi|196044360|ref|ZP_03111596.1| sensor histidine kinase/response regulator [Bacillus cereus
03BB108]
gi|225862944|ref|YP_002748322.1| sensor histidine kinase/response regulator [Bacillus cereus
03BB102]
gi|229183305|ref|ZP_04310534.1| hypothetical protein bcere0004_8810 [Bacillus cereus BGSC 6E1]
gi|118415843|gb|ABK84262.1| sensor histidine kinase [Bacillus thuringiensis str. Al Hakam]
gi|196024999|gb|EDX63670.1| sensor histidine kinase/response regulator [Bacillus cereus
03BB108]
gi|225788896|gb|ACO29113.1| sensor histidine kinase/response regulator [Bacillus cereus
03BB102]
gi|228600175|gb|EEK57766.1| hypothetical protein bcere0004_8810 [Bacillus cereus BGSC 6E1]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|398380279|ref|ZP_10538397.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. AP16]
gi|397721595|gb|EJK82143.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. AP16]
Length = 276
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AENG +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++TDY MP + G+EL ++I+ S E+ ++ VSS L+ G FML+P
Sbjct: 190 MVTDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLRPF 247
>gi|330998526|ref|ZP_08322347.1| response regulator receiver domain protein [Paraprevotella
xylaniphila YIT 11841]
gi|329568257|gb|EGG50073.1| response regulator receiver domain protein [Paraprevotella
xylaniphila YIT 11841]
Length = 1341
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 24/143 (16%)
Query: 7 ASSSSSSSSSNPKP---------PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
A +SS + P P P +L VDD+ +++E +L + +V TAENG+ AL
Sbjct: 1069 APEASSPVAQGPSPEAGEAGNDRPSILLVDDNTQLLEMMEKILA-TKYRVLTAENGLEAL 1127
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSE 117
E L + V+L+++D MPGM G+ L +K+K +PV++++++
Sbjct: 1128 EQL--------------KASAVDLIVSDVMMPGMDGFALCRKLKSQLETSHIPVIMLTAK 1173
Query: 118 NIPTRINECLEEGAQMFMLKPLK 140
+C E GA ++ KP +
Sbjct: 1174 QSADDRVDCYEAGADGYLAKPFE 1196
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N +VT NG++A + L Q+ N+ ++LV
Sbjct: 39 VLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVL-----QDLTNH-------IDLV 86
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 87 LTEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKN 146
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 147 ELKILWQHVW 156
>gi|301052639|ref|YP_003790850.1| sensor histidine kinase [Bacillus cereus biovar anthracis str. CI]
gi|300374808|gb|ADK03712.1| sensor histidine kinase [Bacillus cereus biovar anthracis str. CI]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|228950120|ref|ZP_04112304.1| hypothetical protein bthur0007_61910 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809543|gb|EEM55980.1| hypothetical protein bthur0007_61910 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|196035114|ref|ZP_03102520.1| sensor histidine kinase/response regulator [Bacillus cereus W]
gi|195992178|gb|EDX56140.1| sensor histidine kinase/response regulator [Bacillus cereus W]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|16329450|ref|NP_440178.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|383321191|ref|YP_005382044.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324361|ref|YP_005385214.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490245|ref|YP_005407921.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435511|ref|YP_005650235.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803]
gi|451813609|ref|YP_007450061.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|1651932|dbj|BAA16858.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|339272543|dbj|BAK49030.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803]
gi|359270510|dbj|BAL28029.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273681|dbj|BAL31199.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276851|dbj|BAL34368.1| regulatory component of sensory transduction system Rre41
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957329|dbj|BAM50569.1| regulatory components of sensory transductionsystem [Synechocystis
sp. PCC 6803]
gi|451779578|gb|AGF50547.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
Length = 840
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 14/129 (10%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
S+P+ P V A+DDS ++ KI++ L+ KV AE+G+ A+ + N
Sbjct: 2 SSPQVPTVFAIDDSPLNLKILQRFLEKQGWKVFIAEDGLTAITEI--------------N 47
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+ ++++ D MPG+ G+E+ +++K + E+P++ +S+ I + LE GA ++
Sbjct: 48 QVQPDIIVLDIMMPGIDGFEVCRRLKAAPATAEIPIIFLSALTDQKSIVKGLELGAVDYI 107
Query: 136 LKPLKPSDV 144
KP + ++
Sbjct: 108 HKPFQQEEI 116
>gi|229195307|ref|ZP_04322079.1| hypothetical protein bcere0001_8790 [Bacillus cereus m1293]
gi|228588162|gb|EEK46208.1| hypothetical protein bcere0001_8790 [Bacillus cereus m1293]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|421180018|ref|ZP_15637589.1| sensor/response regulator hybrid [Pseudomonas aeruginosa E2]
gi|404546090|gb|EKA55151.1| sensor/response regulator hybrid [Pseudomonas aeruginosa E2]
Length = 786
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S ++P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEAARQIRDSGRWGDLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|376264927|ref|YP_005117639.1| sensor histidine kinase/response regulator [Bacillus cereus
F837/76]
gi|364510727|gb|AEW54126.1| sensor histidine kinase/response regulator [Bacillus cereus
F837/76]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|384178949|ref|YP_005564711.1| sensor histidine kinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325033|gb|ADY20293.1| sensor histidine kinase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|262403141|ref|ZP_06079701.1| chemotaxis regulator CheY [Vibrio sp. RC586]
gi|262350640|gb|EEY99773.1| chemotaxis regulator CheY [Vibrio sp. RC586]
Length = 119
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDDSI R++V + L+++ +V TA +G AL + T+ +++
Sbjct: 4 VLAVDDSISIRQMVSHTLQDAGYEVETASDGRDALT--------------KAQKTRFDVI 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++ +K ++ S K +P++++++E P + E GA +++KP P
Sbjct: 50 ISDVNMPVMGGFDFVKAVRMQSQYKFIPILMLTTETSPEKKQEGKAVGATGWLVKPFNPE 109
Query: 143 DVKK 146
+ K
Sbjct: 110 TLLK 113
>gi|222086326|ref|YP_002544859.1| two-component response regulator protein [Agrobacterium radiobacter
K84]
gi|221723774|gb|ACM26930.1| two-component response regulator protein [Agrobacterium radiobacter
K84]
Length = 276
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AENG +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++TDY MP + G+EL ++I+ S E+ ++ VSS L+ G FML+P
Sbjct: 190 MVTDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLRPF 247
>gi|49480178|ref|YP_035256.1| sensor histidine kinase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49331734|gb|AAT62380.1| sensor histidine kinase [Bacillus thuringiensis serovar konkukian
str. 97-27]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|381151669|ref|ZP_09863538.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Methylomicrobium album BG8]
gi|380883641|gb|EIC29518.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Methylomicrobium album BG8]
Length = 129
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSA-CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD++ R + + +L+++ V +G AL+ + + KVNL
Sbjct: 12 ILVVDDALSMRSMTKAVLRDAGFAHVFDVPDGEEALKLMKRI--------------KVNL 57
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ D+ MPGM+G +L K +K + P ++++S + +++ E +E G +++KP KP
Sbjct: 58 VVCDWNMPGMSGLDLFKAVKAEPKLASTPFIMLTSSSEGSKVKEAIEAGITAYIIKPYKP 117
Query: 142 SDVKKLTGHLIN 153
+D+ K G +++
Sbjct: 118 ADLIKKIGTMLS 129
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+I+ LL+ + KV +G++A E L + E QN V+L+
Sbjct: 5 VLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEAL----KGEPQN--------VDLI 52
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++G+ LL I E + K++PV+++SS + + + +C+ +GA F++KP++ +
Sbjct: 53 LTEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKN 112
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 113 ELRNLWQHVW 122
>gi|228913678|ref|ZP_04077305.1| hypothetical protein bthur0012_9170 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228845966|gb|EEM90990.1| hypothetical protein bthur0012_9170 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|228932403|ref|ZP_04095285.1| hypothetical protein bthur0009_8810 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228827339|gb|EEM73091.1| hypothetical protein bthur0009_8810 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|157963542|ref|YP_001503576.1| response regulator receiver protein [Shewanella pealeana ATCC
700345]
gi|157848542|gb|ABV89041.1| response regulator receiver protein [Shewanella pealeana ATCC
700345]
Length = 265
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS + R I++ + N + +T AE+G +A+E + +QQ +L
Sbjct: 147 VLVVDDSKMARNIIKRTITNLGLRLITEAEDGQQAIELM------QQQ--------MFDL 192
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITDY MP + G L + I+ S +P+++VSSE T +N + G KP +P
Sbjct: 193 VITDYNMPSVDGLALTQFIRNDSQQSHIPILMVSSEANETHLNNVSQAGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
+ VK++ L+
Sbjct: 253 NTVKQILYQLL 263
>gi|229137795|ref|ZP_04266397.1| hypothetical protein bcere0013_9230 [Bacillus cereus BDRD-ST26]
gi|228645652|gb|EEL01884.1| hypothetical protein bcere0013_9230 [Bacillus cereus BDRD-ST26]
Length = 883
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 765 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 811
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 812 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 868
>gi|255588654|ref|XP_002534675.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223524788|gb|EEF27709.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 132
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 22 HVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
H L VDD R+I+ NLL+ K++ AE+G +AL+ L D ++
Sbjct: 6 HFLVVDDFSTMRRILVNLLRELGHSKISEAEDGEKALQLLLAKDAL----------IGID 55
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+V+TD+ MP M G+ LL++I+E + ++PV++V++E I GA +++KP
Sbjct: 56 IVVTDWNMPVMGGFTLLQRIREHPDLHQLPVILVTAEAKKENIISAAAAGADGYIVKPFN 115
Query: 141 PSDVKK 146
+ +K+
Sbjct: 116 AATLKE 121
>gi|392308986|ref|ZP_10271520.1| two-component response regulator [Pseudoalteromonas citrea NCIMB
1889]
Length = 300
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 16/134 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K +L VDD ++R +++N L +++ E+ +AL FL K
Sbjct: 3 KTARILIVDDDPLNRVVLDNTLSEE-YQISQCESAEQALTFLA--------------DNK 47
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V+L+I+D MPGM+GY+LL+++K +PV+++S+ N + L+ GA ++ KP
Sbjct: 48 VDLIISDIRMPGMSGYDLLERLKAKQHTYAIPVIIISASNSYNDEAKGLQMGAMDYITKP 107
Query: 139 LKPSDVK-KLTGHL 151
P VK ++ HL
Sbjct: 108 FSPLIVKARVKNHL 121
>gi|239908976|ref|YP_002955718.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239798843|dbj|BAH77832.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 126
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 17/128 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L DDS V + +++ +L C+ V T NG A E L E E+ L
Sbjct: 7 ILVADDSAVMQNVLKKILLGIGCRDVRTVANGQAAWELL----ESEKD---------FEL 53
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V D MP ++G LL +I++S M+ +PVV++SSE P RI E + A +++KP
Sbjct: 54 VFADLRMPRLSGLALLDRIRQSPAMQALPVVIISSEADPARILEAGQHNATAYVVKPF-- 111
Query: 142 SDVKKLTG 149
V+K++G
Sbjct: 112 -SVEKISG 118
>gi|157374862|ref|YP_001473462.1| diguanylate cyclase [Shewanella sediminis HAW-EB3]
gi|157317236|gb|ABV36334.1| diguanylate cyclase [Shewanella sediminis HAW-EB3]
Length = 420
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL DDS+V RK V +LL+ +V A++G A E L N + L+
Sbjct: 124 VLVADDSVVSRKFVRSLLEQHLYQVVEADDGNSAWEVL-------------QNQPDIQLL 170
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
ITDY MPG+ G+ L+ K++E +E+ ++ +SS++ + ++ GA F+ KP
Sbjct: 171 ITDYNMPGLDGFGLILKVREKFSREELAIIGLSSDDDESLSARFIKNGANDFLQKPF 227
>gi|423607195|ref|ZP_17583088.1| hypothetical protein IIK_03776 [Bacillus cereus VD102]
gi|401240536|gb|EJR46936.1| hypothetical protein IIK_03776 [Bacillus cereus VD102]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|365884700|ref|ZP_09423732.1| Chemotaxis protein cheY [Bradyrhizobium sp. ORS 375]
gi|365286677|emb|CCD96263.1| Chemotaxis protein cheY [Bradyrhizobium sp. ORS 375]
Length = 121
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+LAVDDS R +V LK + V AE+G AL L G K +L
Sbjct: 4 RILAVDDSKTMRDMVAFTLKKAGFDVAEAEDGKAALNVL--------------TGGKFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G L+K ++ S + VP++++++E+ T+ + GA +++KP P
Sbjct: 50 IITDLNMPNMDGISLIKNVRSGSQHRAVPILILTTESDGTKKADGKAAGATGWLVKPFNP 109
>gi|423577168|ref|ZP_17553287.1| hypothetical protein II9_04389 [Bacillus cereus MSX-D12]
gi|401206339|gb|EJR13132.1| hypothetical protein II9_04389 [Bacillus cereus MSX-D12]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|47564964|ref|ZP_00236008.1| sensor histidine kinase/response regulator [Bacillus cereus G9241]
gi|47558337|gb|EAL16661.1| sensor histidine kinase/response regulator [Bacillus cereus G9241]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|449144600|ref|ZP_21775414.1| chemotaxis protein CheY [Vibrio mimicus CAIM 602]
gi|449079731|gb|EMB50651.1| chemotaxis protein CheY [Vibrio mimicus CAIM 602]
Length = 119
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VLAVDDSI R++V + L+++ +V TA +G AL + ++ ++
Sbjct: 3 RVLAVDDSISIRQMVSHTLQDAGYEVETATDGRDALT--------------KAQKSRFDV 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M+G+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 49 IISDVNMPVMSGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNP 108
Query: 142 SDVKK 146
+ K
Sbjct: 109 ETLLK 113
>gi|406877643|gb|EKD26804.1| hypothetical protein ACD_79C01009G0002 [uncultured bacterium]
Length = 129
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 22 HVLAVDDSIVDRKIVE---NLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
++L VDDS + R ++ N+ K ++ A NG ALE L +
Sbjct: 4 NILIVDDSEIIRAVIVKTLNVAKVPFKQIFQASNGKEALEIL--------------DKEW 49
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
++LV D MP M G E+++K+ +++K +PVVVVS+E TRI E +G + ++ KP
Sbjct: 50 IDLVFADINMPVMNGLEMIEKMNSHNLLKSIPVVVVSTEGSATRIEELTAKGIKAYIRKP 109
Query: 139 LKPSDVKKLTGHLI 152
P V+++ ++
Sbjct: 110 FTPEQVRQVVDKIM 123
>gi|217958585|ref|YP_002337133.1| sensor histidine kinase/response regulator [Bacillus cereus AH187]
gi|375283079|ref|YP_005103517.1| sensor histidine kinase/response regulator [Bacillus cereus NC7401]
gi|423354395|ref|ZP_17332021.1| hypothetical protein IAU_02470 [Bacillus cereus IS075]
gi|423569962|ref|ZP_17546208.1| hypothetical protein II7_03184 [Bacillus cereus MSX-A12]
gi|217065019|gb|ACJ79269.1| sensor histidine kinase/response regulator [Bacillus cereus AH187]
gi|358351605|dbj|BAL16777.1| sensor histidine kinase/response regulator [Bacillus cereus NC7401]
gi|401087280|gb|EJP95488.1| hypothetical protein IAU_02470 [Bacillus cereus IS075]
gi|401205500|gb|EJR12303.1| hypothetical protein II7_03184 [Bacillus cereus MSX-A12]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|297582941|ref|YP_003698721.1| response regulator receiver protein [Bacillus selenitireducens
MLS10]
gi|297141398|gb|ADH98155.1| response regulator receiver protein [Bacillus selenitireducens
MLS10]
Length = 121
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L DD V + ++E+ L + VT ENG RA ++ + + + +L
Sbjct: 4 RILVADDEQVLQMLIEDTLSDEGYDVTVVENGKRA------------KDMILDDSHRFDL 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VI DY MP +TG E++ +K++ + P +++++ ++ + + L+EGA FM KP KP
Sbjct: 52 VIVDYMMPELTGMEVIIAVKQT-LSSPPPFLMLTARSLDSDASAYLDEGADGFMSKPFKP 110
Query: 142 SDVKKLTGHLI 152
SD+ + L+
Sbjct: 111 SDLVEKVADLL 121
>gi|222094734|ref|YP_002528794.1| sensor histidine kinase [Bacillus cereus Q1]
gi|221238792|gb|ACM11502.1| sensor histidine kinase [Bacillus cereus Q1]
Length = 896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+I+ LL+ + KV +G++A E L + E QN V+L+
Sbjct: 53 VLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEAL----KGEPQN--------VDLI 100
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++G+ LL I E + K++PV+++SS + + + +C+ +GA F++KP++ +
Sbjct: 101 LTEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKN 160
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 161 ELRNLWQHVW 170
>gi|414078789|ref|YP_006998107.1| response regulator receiver, CheY [Anabaena sp. 90]
gi|413972205|gb|AFW96294.1| response regulator receiver, CheY [Anabaena sp. 90]
Length = 123
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L V+DSIV R+++ +LLK S +VT A +G ALE + + +LV
Sbjct: 4 ILIVEDSIVQREMMTDLLKASGLEVTHASDGAEALEAI--------------HKAPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ D MP M GYEL +++K + VPVV+ SS+ +++GA ++ KP +P
Sbjct: 50 VLDIVMPRMNGYELCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQP 108
>gi|411010460|ref|ZP_11386789.1| chemotaxis protein CheY [Aeromonas aquariorum AAK1]
gi|423197841|ref|ZP_17184424.1| hypothetical protein HMPREF1171_02456 [Aeromonas hydrophila SSU]
gi|404630959|gb|EKB27603.1| hypothetical protein HMPREF1171_02456 [Aeromonas hydrophila SSU]
Length = 122
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P VL VDDS R++V LK + +V A +G AL+ L +G K+
Sbjct: 2 PKTVLIVDDSATIRQVVGMTLKGAGYEVMEASDGKDALKKL--------------DGKKI 47
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
NL+I+D MP M G +K+ K+ + K PV+++++E+ ++ E GA+ +++KP
Sbjct: 48 NLIISDVNMPNMDGISFVKEAKKLASYKFTPVIMLTTESQDSKKQEGQAAGAKAWVVKPF 107
Query: 140 KPSDVKKLTGHLI 152
+P + LI
Sbjct: 108 QPDQMLAAVAKLI 120
>gi|365886008|ref|ZP_09424984.1| Chemotaxis protein cheY [Bradyrhizobium sp. STM 3809]
gi|365338543|emb|CCD97515.1| Chemotaxis protein cheY [Bradyrhizobium sp. STM 3809]
Length = 121
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+LAVDDS R +V LK + V AE+G AL L G K +L
Sbjct: 4 RILAVDDSKTMRDMVTFTLKKAGFDVAEAEDGKAALNVL--------------TGGKFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G L+K ++ S + VP++++++E+ T+ + GA +++KP P
Sbjct: 50 IITDLNMPNMDGISLIKNVRSGSQHRAVPILILTTESDGTKKADGKAAGATGWLVKPFNP 109
>gi|206975598|ref|ZP_03236510.1| sensor histidine kinase/response regulator [Bacillus cereus
H3081.97]
gi|206746060|gb|EDZ57455.1| sensor histidine kinase/response regulator [Bacillus cereus
H3081.97]
Length = 896
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|228984189|ref|ZP_04144371.1| hypothetical protein bthur0001_8970 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775476|gb|EEM23860.1| hypothetical protein bthur0001_8970 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 883
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 765 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 811
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 812 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 868
>gi|116624444|ref|YP_826600.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227606|gb|ABJ86315.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 129
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RKI++ +L+ + + E L L+ E +V+LV
Sbjct: 5 ILVVDDSAAIRKILQRVLRQTGMAIRAIHEAGDGQEALALLAEH-----------RVDLV 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP M G +LL +K S+ PVV++++E T++ E ++ GA ++ KP
Sbjct: 54 LTDINMPKMDGLQLLASLKASAQWHNTPVVMITTEGGETKVAEAVKLGAAGYVRKPFTAD 113
Query: 143 DVK-KLTGHL 151
+K KL G L
Sbjct: 114 QIKEKLVGIL 123
>gi|346225089|ref|ZP_08846231.1| response regulator receiver protein [Anaerophaga thermohalophila
DSM 12881]
Length = 121
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS R++V L+N V +G AL+FL +G ++++
Sbjct: 5 VLIVDDSESIREVVNFTLQNEGYNVLVGVDGDDALQFL--------------DGRPIDII 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP M G EL++K++E K +P++ +++E+ + E + GA +++KP P+
Sbjct: 51 ITDLHMPNMNGLELIRKVREMDDYKHIPILFLTTESQAAKKMEAKQAGATGWIIKPFVPA 110
>gi|428217823|ref|YP_007102288.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
gi|427989605|gb|AFY69860.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
Length = 243
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS ++R + L+ CK+T A +G AL+ L + +L+
Sbjct: 8 VLIVDDSEMNRDTLARRLRQQGCKITMAADGKEALKIL--------------SKQLFDLI 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ D MP + GY +L K+K S ++ +PV+++S+ + C+E GA+ ++ KP P
Sbjct: 54 LLDIMMPEVDGYTVLGKVKASETLQHMPVIMISALEELDSVMRCMEMGAEDYLTKPFDP 112
>gi|406864097|gb|EKD17143.1| hsp90-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1183
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G + S+ P P HVL V+D+IV++K++ L++ C V+ A +G AL FL
Sbjct: 1019 GSEAPKQDSALPTPTPRHVLVVEDNIVNQKVLSRQLQSVGCLVSVANHGKEALSFL---- 1074
Query: 65 EQEQQNNLNSN---GTKVNLVITDYCMPGMTGYELLKKI----KESSVMKEVPVVVVSSE 117
E+ N G ++++V+ D MP M G +K I KE ++ VPV+ V++
Sbjct: 1075 --EKSRFWKGNEFRGIELSVVLMDLEMPVMDGLTCVKHIRQLQKEGLIVGHVPVIAVTAN 1132
Query: 118 NIPTRINECLEEGAQMFMLKPLKPSDV 144
+I+ E G + KP + D+
Sbjct: 1133 ARSEQISTAKESGMDSVVTKPFRIPDL 1159
>gi|258404791|ref|YP_003197533.1| response regulator receiver protein [Desulfohalobium retbaense DSM
5692]
gi|257797018|gb|ACV67955.1| response regulator receiver protein [Desulfohalobium retbaense DSM
5692]
Length = 129
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTT---AENGMRALEFLGLVDEQEQQNNLNSNGTK 78
VL VDDS++ R +V L+ S K+ T A NG QE + L +N +
Sbjct: 4 EVLVVDDSMIIRSMVAKTLRMSGLKLGTILFATNG------------QEGLDQLRNN--Q 49
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V++V D MP M G E++ + E ++ VPVV+VS+E TRI +G ++ KP
Sbjct: 50 VDIVFADINMPVMDGVEMVNAMAEEGFLERVPVVIVSTERSTTRIEALKAKGVNAYLQKP 109
Query: 139 LKPSDVKKLTGHLI 152
P K+ L+
Sbjct: 110 FMPEQFKETVDRLL 123
>gi|428302090|ref|YP_007140396.1| response regulator receiver protein [Calothrix sp. PCC 6303]
gi|428238634|gb|AFZ04424.1| response regulator receiver protein [Calothrix sp. PCC 6303]
Length = 146
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK--VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
+L V+DS D KI++ L++ + + +G ALEFL E+ +N + +K +
Sbjct: 9 LLIVEDSNEDFKILQRLMQRLDVQNPIYRCSSGDEALEFL----ERIGNDNNSDISSKPS 64
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+++ D +PG+ G ++L +IK+ + KE+PVV+ ++ + P I C ++GA +++KP+
Sbjct: 65 VILLDLNLPGIDGRDILSQIKQDNKFKEIPVVIFTTSSNPKDIELCYQKGANGYLIKPMN 124
Query: 141 PSDVKKLTGHLI 152
++KK+ +
Sbjct: 125 ADELKKIVQAFV 136
>gi|153833234|ref|ZP_01985901.1| signal transduction histidine kinase [Vibrio harveyi HY01]
gi|148870505|gb|EDL69420.1| signal transduction histidine kinase [Vibrio harveyi HY01]
Length = 1200
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
+ + S+ ++ VL VDD ++R + + + A +G+ A+E L E
Sbjct: 952 ITQTHSAQTAEYQWDGRVLVVDDDAINRLLFKRQFEKLGVNCQLAASGLEAIEAL----E 1007
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
Q Q +N+ + NLVITD MP M GY+L + +K + V+ +PVV ++EN I +
Sbjct: 1008 QAQSDNILA---PFNLVITDCHMPDMDGYQLTQALKANKVLASIPVVTCTAENSRNVIEK 1064
Query: 126 CLEEGAQMFMLKPLKPSDVKKL 147
+ G + + KP S+++ L
Sbjct: 1065 AEQSGIETVLFKPYTLSELQAL 1086
>gi|423371102|ref|ZP_17348442.1| hypothetical protein IC5_00158 [Bacillus cereus AND1407]
gi|401102928|gb|EJQ10913.1| hypothetical protein IC5_00158 [Bacillus cereus AND1407]
Length = 896
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|374603703|ref|ZP_09676679.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
gi|374390674|gb|EHQ62020.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
Length = 995
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 14 SSSNPKPP-------HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
+++ P PP H+LAVDD V+ ++ +L +TT ++ LE LG
Sbjct: 653 AATVPIPPLLQDGNIHILAVDDDPVNLNVLVGILSTEPYTITTVQSAREVLELLG----- 707
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
QQ +L+I D MP M+GYEL ++++E + E+P++++++ + P I
Sbjct: 708 TQQ---------WDLLIADVMMPHMSGYELTQRVREHYSVSELPILLLTARSQPADIYTG 758
Query: 127 LEEGAQMFMLKPLKPSDVK 145
GA ++ KP+ ++K
Sbjct: 759 FSAGANDYVTKPVDALELK 777
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD + K++ENLL+ +VTT + ALE L +E +N K +LV
Sbjct: 23 VLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML-----RENRN-------KYDLV 70
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++SS + + + GA ++LKP++
Sbjct: 71 ISDVNMPDMDGFKLLELV---GLEMDLPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLE 127
Query: 143 DVKKLTGHLI 152
++K + H+I
Sbjct: 128 ELKNIWQHVI 137
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS RKIV LL+ KV++A +G+ A + L +E+ N+ +LV
Sbjct: 35 LVEADDST--RKIVAALLRKCGYKVSSASDGLEAWKTL-----KEKPND-------TDLV 80
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL + E K +PV+++SS + + EC+ +GA F++KP++ +
Sbjct: 81 LTEVELPNVSGYALLSMMMEHETCKSIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKN 140
Query: 143 DVKKLTGHLIN 153
+++ L H+
Sbjct: 141 ELRNLWQHVWR 151
>gi|262173236|ref|ZP_06040913.1| chemotaxis regulator CheY [Vibrio mimicus MB-451]
gi|261890594|gb|EEY36581.1| chemotaxis regulator CheY [Vibrio mimicus MB-451]
Length = 119
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VLAVDDSI R++V + L+++ +V TA +G AL + ++ ++
Sbjct: 3 RVLAVDDSISIRQMVSHTLQDAGYEVETATDGRDALT--------------KAQKSRFDV 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M+G+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 49 IISDVNMPVMSGFEFVKAVRLQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNP 108
Query: 142 SDVKK 146
+ K
Sbjct: 109 ETLLK 113
>gi|302878235|ref|YP_003846799.1| response regulator receiver modulated diguanylate cyclase
[Gallionella capsiferriformans ES-2]
gi|302581024|gb|ADL55035.1| response regulator receiver modulated diguanylate cyclase
[Gallionella capsiferriformans ES-2]
Length = 636
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+D K+++ +LK++ V A NG+ AL ++ +Q Q L+
Sbjct: 325 VLVVEDDPATLKLLDAMLKSAGHTVALAANGLEALR---MIRQQVPQ-----------LI 370
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++D+ MP M G L +K++ES + + V+++++ P R+ + E GA ++LKP+ P
Sbjct: 371 VSDWMMPEMDGLSLCRKLRESDAWRNIYTVILTAQESPERLIQAFEAGADDYLLKPISP 429
>gi|39726322|gb|AAR30106.1| putative histidine kinase M3YPp [Botryotinia fuckeliana]
Length = 992
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S S S ++ P H+L V+D+IV++K++ L+++ C V+ A +G+ ALEFL ++
Sbjct: 818 SRRSQSPASSAPKHILIVEDNIVNQKVLSKQLRSAGCIVSVANHGLEALEFL---EKSTF 874
Query: 69 QNNL--NSNGTKVNLVITDYCMPGMTGYELLKKI----KESSVMKEVPVVVVSSENIPTR 122
+L +G N+++ D MP M G +++I +E V VPV+ V++ +
Sbjct: 875 STSLPEGVSGIPCNILLMDLEMPIMDGLTCVRQIRKWEREGRVKGRVPVIAVTANARSEQ 934
Query: 123 INECLEEGAQMFMLKPLK 140
I E G + KP +
Sbjct: 935 IARAKEAGMDSVVTKPFR 952
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
+P VL V+D R ++LK+ V ENG +AL+ L +N
Sbjct: 2 DPSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLL------------VTNH 49
Query: 77 TKVNLVITDYCMPGMTGYELLKKI-KESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
K +LV+ D +P MTG ELL +I K S+ + +P+V+ SS + CL +GA+ ++
Sbjct: 50 AKFDLVLCDVMLPVMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYL 109
Query: 136 LKPLKPSDVKKLTGHL 151
+KP++ + K L H+
Sbjct: 110 IKPIQVNTAKTLVRHV 125
>gi|375337642|ref|ZP_09778986.1| hybrid sensory histidine kinase BarA [Succinivibrionaceae bacterium
WG-1]
Length = 886
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDD++ + K++ LLK+ V TA NG+ A+E + T+ NL+
Sbjct: 716 ILAVDDNVANLKLISTLLKDYVTDVFTASNGLEAVEL--------------CSHTEFNLI 761
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
D MP M G +K+IK+++ P++ VS+ I + + +EEG ++ KPL
Sbjct: 762 FMDIQMPIMDGLSAIKQIKKTAANANTPIIAVSALVIESEQKKFIEEGMADYLAKPLDEK 821
Query: 143 DVKKL 147
+K++
Sbjct: 822 QLKQI 826
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 35 LVETDDST--RQVVIALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 80
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 81 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 140
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 141 NELKNLWAHVW 151
>gi|424882057|ref|ZP_18305689.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518420|gb|EIW43152.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii WU95]
Length = 276
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AE+G +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
VITDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 190 VITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|148269592|ref|YP_001244052.1| response regulator receiver protein [Thermotoga petrophila RKU-1]
gi|147735136|gb|ABQ46476.1| response regulator receiver protein [Thermotoga petrophila RKU-1]
Length = 122
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS V RKIV LK +V AENG ALE L S T +L+
Sbjct: 5 ILLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKL-------------SEFTP-DLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+ +LKK++E K +PV+V++++ + GA+ M KP PS
Sbjct: 51 VLDIMMPVMDGFTVLKKLQEKENWKRIPVIVLTAKGGEEDESLAFSLGARKVMRKPFSPS 110
Query: 143 DVKKLTGHLIN 153
+ HL+N
Sbjct: 111 QFIEEVKHLLN 121
>gi|148655152|ref|YP_001275357.1| CheA signal transduction histidine kinase [Roseiflexus sp. RS-1]
gi|148567262|gb|ABQ89407.1| CheA signal transduction histidine kinase [Roseiflexus sp. RS-1]
Length = 783
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 15 SSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
S + P +L VDDS+ R + +N+L+ + +V A +G+ AL+ L L++
Sbjct: 655 SQQRRIPQILVVDDSLTTRMLEKNILEAAGYQVHLATDGVEALDVL---------QRLST 705
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
NG +LVI+D MP + G+EL +K++ K +PVV+V+S + P + GA +
Sbjct: 706 NG-GCDLVISDIDMPRLNGFELTEKLRAGERFKHLPVVLVTSLDAPEHRERGVTVGADAY 764
Query: 135 MLK 137
++K
Sbjct: 765 IVK 767
>gi|126172757|ref|YP_001048906.1| response regulator receiver protein [Shewanella baltica OS155]
gi|153002322|ref|YP_001368003.1| response regulator receiver protein [Shewanella baltica OS185]
gi|217974910|ref|YP_002359661.1| response regulator receiver protein [Shewanella baltica OS223]
gi|373948001|ref|ZP_09607962.1| response regulator receiver protein [Shewanella baltica OS183]
gi|386326153|ref|YP_006022270.1| response regulator receiver protein [Shewanella baltica BA175]
gi|386339530|ref|YP_006035896.1| response regulator receiver protein [Shewanella baltica OS117]
gi|125995962|gb|ABN60037.1| response regulator receiver protein [Shewanella baltica OS155]
gi|151366940|gb|ABS09940.1| response regulator receiver protein [Shewanella baltica OS185]
gi|217500045|gb|ACK48238.1| response regulator receiver protein [Shewanella baltica OS223]
gi|333820298|gb|AEG12964.1| response regulator receiver protein [Shewanella baltica BA175]
gi|334861931|gb|AEH12402.1| response regulator receiver protein [Shewanella baltica OS117]
gi|373884601|gb|EHQ13493.1| response regulator receiver protein [Shewanella baltica OS183]
Length = 265
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS + R +++ + N K +T AE+G +A+E + +NN+ +L
Sbjct: 147 VLVVDDSRMARNVIKRTIGNLGMKLITEAEDGAQAIELM--------KNNM------FDL 192
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITDY MP + G L + I+ S +P+++VSSE T ++ + G KP +P
Sbjct: 193 VITDYNMPSVDGLALTQYIRNESQQSHIPILMVSSEANDTHLSNVSQAGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
VKKL L+
Sbjct: 253 KLVKKLLYQLL 263
>gi|442611604|ref|ZP_21026310.1| Chemotaxis regulator-transmits chemoreceptor signals to flagelllar
motor components CheY [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747532|emb|CCQ12372.1| Chemotaxis regulator-transmits chemoreceptor signals to flagelllar
motor components CheY [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 265
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS + R + +L N A +T AE+G +AL ++DEQ +L
Sbjct: 147 ILLVDDSRLARNHIRRVLTNLGAQHITEAEDGAQAL---AILDEQ-----------MFDL 192
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MP + G EL +KI+ S +PV++V+SE ++ + G KP +P
Sbjct: 193 IVTDYNMPQVNGQELTEKIRASDKHSHIPVMMVTSEANDAHLSTISQSGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
VKKL L+
Sbjct: 253 ETVKKLLFQLL 263
>gi|257129263|gb|ACV42481.1| putative adenylate/guanylate cyclase [Lyngbya majuscula 19L]
Length = 1156
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD V+R+++ N L + TA NG+ ALE L S G + +L+
Sbjct: 747 ILIVDDEPVNRQVISNYLSMENYAIATATNGLEALEML-------------STGFQPDLI 793
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP MTGYE+ KI++ + E+PV+++++ N + + E G ++ KP
Sbjct: 794 LLDVMMPRMTGYEVCAKIRQKFLPSELPVIMLTANNQISDLVEGFTFGVNDYLTKPCSKH 853
Query: 143 D-VKKLTGHL 151
+ + ++ HL
Sbjct: 854 ELLARIKSHL 863
>gi|197118029|ref|YP_002138456.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
gi|197087389|gb|ACH38660.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
Length = 406
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS DRKI+ + C+V A NG + LE + K +L+
Sbjct: 3 VLVVDDSRNDRKIIRYNFEWHGCEVLEASNGKQGLEL--------------AAAEKPDLI 48
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE-GAQMFMLKPLKP 141
I+D MP M G++ L +IK+ K +P + S+ +R E GA+ F+ KP++P
Sbjct: 49 ISDCLMPVMDGFQFLHEIKKFQDTKTIPFIFYSAVYTGSREAELAASLGARAFLAKPMRP 108
Query: 142 SDVKKLTGHLI 152
++ G L+
Sbjct: 109 EELWDEVGRLM 119
>gi|160877046|ref|YP_001556362.1| response regulator receiver protein [Shewanella baltica OS195]
gi|378710261|ref|YP_005275155.1| response regulator receiver protein [Shewanella baltica OS678]
gi|418022379|ref|ZP_12661366.1| response regulator receiver protein [Shewanella baltica OS625]
gi|160862568|gb|ABX51102.1| response regulator receiver protein [Shewanella baltica OS195]
gi|315269250|gb|ADT96103.1| response regulator receiver protein [Shewanella baltica OS678]
gi|353538604|gb|EHC08159.1| response regulator receiver protein [Shewanella baltica OS625]
Length = 265
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS + R +++ + N K +T AE+G +A+E + +NN+ +L
Sbjct: 147 VLVVDDSRMARNVIKRTIGNLGMKLITEAEDGAQAIELM--------KNNM------FDL 192
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITDY MP + G L + I+ S +P+++VSSE T ++ + G KP +P
Sbjct: 193 VITDYNMPSVDGLALTQYIRNESQQSHIPILMVSSEANDTHLSNVSQAGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
VKKL L+
Sbjct: 253 KLVKKLLYQLL 263
>gi|427419882|ref|ZP_18910065.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425762595|gb|EKV03448.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 121
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK + +VT A +G+ AL + G +LV
Sbjct: 4 VLVVEDSVAQREMIIDLLKGNGLQVTVASDGVEALAHI--------------QGDLPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ ++IK + +PVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRIKSDPATQNLPVVLCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|410663050|ref|YP_006915421.1| response regulator [Simiduia agarivorans SA1 = DSM 21679]
gi|409025407|gb|AFU97691.1| response regulator [Simiduia agarivorans SA1 = DSM 21679]
Length = 571
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
++ P +L DD+ DR I+E ++K +V +AENG++A+E
Sbjct: 2 TSAHPLTILVADDTKTDRLILETIVKKDGHRVISAENGLQAVE--------------KFT 47
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+ +LV+ D MP M G+E ++IKE + + VP++ ++S N + CLE G F+
Sbjct: 48 RDRPDLVLLDALMPEMDGFEAARQIKEIAGDELVPIIFLTSLNDTQSLVRCLEAGGDDFL 107
Query: 136 LKP 138
KP
Sbjct: 108 SKP 110
>gi|333978467|ref|YP_004516412.1| response regulator receiver protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821948|gb|AEG14611.1| response regulator receiver protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 123
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS R ++L + V A NG ALE S +L
Sbjct: 4 RVLVVDDSSTVRGYYTSILSKAGFTVDQAANGYEALE--------------KSVEFDYDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
I D MP M+GYEL+++++E VPVV++S+E + E GA +F++KP++P
Sbjct: 50 FIVDINMPKMSGYELVRQLREDERGVRVPVVIISTEAKDSDRLEGYRAGANLFLVKPVRP 109
Query: 142 SDVKKLT 148
+ LT
Sbjct: 110 ERLLFLT 116
>gi|423201853|ref|ZP_17188432.1| diguanylate cyclase (GGDEF) domain-containing protein [Aeromonas
veronii AER39]
gi|404615800|gb|EKB12759.1| diguanylate cyclase (GGDEF) domain-containing protein [Aeromonas
veronii AER39]
Length = 410
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
SN + V+ VDDS++ R + NLL+ V AE+G +AL L
Sbjct: 117 SNNRAIEVMVVDDSMMSRHHIANLLRRQLLTVFEAESGQQALHLL-------------RE 163
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+ L++TDY MP M G EL++++++ + + ++ +SS T ++ GA F+
Sbjct: 164 HPTIRLIVTDYLMPQMDGIELVRRLRDIFDKQSLAILGLSSSEDKTLSARFIKLGANDFL 223
Query: 136 LKPLKPSDVKKLTGH 150
KP P ++ GH
Sbjct: 224 SKPFTPEELYCRVGH 238
>gi|332712429|ref|ZP_08432355.1| signal transduction histidine kinase [Moorea producens 3L]
gi|332348724|gb|EGJ28338.1| signal transduction histidine kinase [Moorea producens 3L]
Length = 1156
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD V+R+++ N L + TA NG+ ALE L S G + +L+
Sbjct: 747 ILIVDDEPVNRQVISNYLSMENYAIATATNGLEALEML-------------STGFQPDLI 793
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP MTGYE+ KI++ + E+PV+++++ N + + E G ++ KP
Sbjct: 794 LLDVMMPRMTGYEVCAKIRQKFLPSELPVIMLTANNQISDLVEGFTFGVNDYLTKPCSKH 853
Query: 143 D-VKKLTGHL 151
+ + ++ HL
Sbjct: 854 ELLARIKSHL 863
>gi|261213122|ref|ZP_05927406.1| chemotaxis regulator CheY [Vibrio sp. RC341]
gi|260838187|gb|EEX64864.1| chemotaxis regulator CheY [Vibrio sp. RC341]
Length = 119
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VLAVDDSI R++V + L+++ +V TA +G AL + + ++ ++
Sbjct: 3 RVLAVDDSISIRQMVSHTLQDAGYEVETASDGRDAL--------------VKAQKSRFDV 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 49 IISDVNMPVMGGFEFVKAVRLQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNP 108
Query: 142 SDVKK 146
+ K
Sbjct: 109 ETLLK 113
>gi|427710591|ref|YP_007052968.1| response regulator receiver protein [Nostoc sp. PCC 7107]
gi|427363096|gb|AFY45818.1| response regulator receiver protein [Nostoc sp. PCC 7107]
Length = 157
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNS--ACKVTTAENGMRALEFLGLVDEQEQQN 70
S+S PK P +L V+DS D + + LL+ S A + NG +AL FL +
Sbjct: 5 STSPIPKIPLLLIVEDSNEDFEALHRLLQRSPIAISIQRCVNGEQALAFL------YRTG 58
Query: 71 NLNSNGTKV--NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
N + + L++ D +PG G E+L++IK+ +K VPVVV ++ N P I +C
Sbjct: 59 NYSDREISLMPGLIVLDLNLPGTDGREVLRQIKQDDHLKTVPVVVFTTSNNPKDIEDCYR 118
Query: 129 EGAQMFMLKPLKPSDVKK 146
G +++KP+ +K+
Sbjct: 119 YGVNSYIVKPINFEQLKR 136
>gi|427419755|ref|ZP_18909938.1| PAS domain S-box [Leptolyngbya sp. PCC 7375]
gi|425762468|gb|EKV03321.1| PAS domain S-box [Leptolyngbya sp. PCC 7375]
Length = 825
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N + +L VDD +R ++ NLLK + AENG L+ LG +G
Sbjct: 614 NGRRRQILVVDDHWENRVVLRNLLKPLGFDIVEAENGQEGLDMLG-------------SG 660
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
+ +LVITD MP M G+E LK I+ S +K+ V+V S+ + L +G+ F+
Sbjct: 661 SP-DLVITDLVMPTMDGFEFLKHIRNSEDLKQAKVIVSSASVSQSYQQRALAQGSDGFLA 719
Query: 137 KPLKPSDVKK-LTGHL 151
KP+ +++ + L+ HL
Sbjct: 720 KPIDETNLLEILSTHL 735
>gi|323701833|ref|ZP_08113503.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
gi|323533137|gb|EGB23006.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
Length = 1274
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S S + + K +VL V+D+ +++++++LL ++ +VT AENG +ALE L
Sbjct: 1041 SGSDAPDNKNKITNVLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEML-------- 1092
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
N + ++V+ D MP M GYE + I+ K +P++ +++ + +CL
Sbjct: 1093 ------NQSNFDIVLMDMQMPVMDGYETTRVIRSDERYKSLPIIALTAHAMKGDNEKCLA 1146
Query: 129 EGAQMFMLKPLK 140
G ++ KP+K
Sbjct: 1147 AGCDDYLAKPVK 1158
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
+ S H++ +DD D+ +E L C V A G + F+ E+ N
Sbjct: 908 THSRRSDQTHIVLIDD---DKMALEFL----NCIVGGA--GYQTHSFM----LAEEALNY 954
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
NG +V+ +I D MPGM G+E L ++ + K +PV++ + +++ + L + +
Sbjct: 955 IINGGQVHAIILDLLMPGMDGFEFLDNLRADANYKSIPVLIYTGKDLTKEDYQKLNDKYE 1014
Query: 133 MFMLKPLKPSDV 144
+ K D+
Sbjct: 1015 RLLNKSFMHPDI 1026
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL +D ++++ N L+ + V + G +AL + + +++
Sbjct: 796 VLVAEDEWTTKQLIANYLEKAGYTVVATDQGKQALTLAKIY--------------QPDVL 841
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVS 115
+ D +P ++G+E+L KIK+ +++PVVV S
Sbjct: 842 VLDILLPDLSGWEVLAKIKKDQETQDIPVVVCS 874
>gi|146338882|ref|YP_001203930.1| chemotaxis protein CheY [Bradyrhizobium sp. ORS 278]
gi|146191688|emb|CAL75693.1| Chemotaxis protein cheY [Bradyrhizobium sp. ORS 278]
Length = 121
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+LAVDDS R +V LK + V AE+G AL LG G + +L
Sbjct: 4 RILAVDDSKTMRDMVSFTLKKAGFDVAEAEDGKAALNVLG--------------GGRFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G L+K ++ S + VP++++++E+ + + GA +++KP P
Sbjct: 50 IITDLNMPNMDGITLIKNVRAGSQHRAVPILILTTESDGAKKADGKAAGATGWLVKPFNP 109
>gi|365874620|ref|ZP_09414153.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Thermanaerovibrio velox DSM 12556]
gi|363984707|gb|EHM10914.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Thermanaerovibrio velox DSM 12556]
Length = 360
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 26 VDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITD 85
VDDSI++ +I+E +L+ +V T N + AL ++ +L I D
Sbjct: 2 VDDSIMNLQILEEVLRIQGYEVRTFPNPLEALS--------------KADQDPPDLFILD 47
Query: 86 YCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDV 144
+P M G+EL +++K+ +++E+PV+ VSS + P I++ EG ++ KP +P ++
Sbjct: 48 VVLPEMDGFELCRRLKQRELLREIPVMFVSSLDDPQHISKAFLEGGVDYVPKPFRPEEI 106
>gi|333923713|ref|YP_004497293.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333749274|gb|AEF94381.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 1274
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S S + + K +VL V+D+ +++++++LL ++ +VT AENG +ALE L
Sbjct: 1041 SGSDAPDNKNKITNVLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEML-------- 1092
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
N + ++V+ D MP M GYE + I+ K +P++ +++ + +CL
Sbjct: 1093 ------NQSNFDIVLMDMQMPVMDGYETTRVIRSDERYKSLPIIALTAHAMKGDNEKCLA 1146
Query: 129 EGAQMFMLKPLK 140
G ++ KP+K
Sbjct: 1147 AGCDDYLAKPVK 1158
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
+ S H++ +DD D+ +E L C V A G + F+ E+ N
Sbjct: 908 THSRRSDQTHIVLIDD---DKMALEFL----NCIVGGA--GYQTHSFM----LAEEALNY 954
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
NG +V+ +I D MPGM G+E L ++ + K +PV++ + +++ + L + +
Sbjct: 955 IINGGQVHAIILDLLMPGMDGFEFLDNLRADANYKSIPVLIYTGKDLTKEDYQKLNDKYE 1014
Query: 133 MFMLKPLKPSDV 144
+ K D+
Sbjct: 1015 RLLNKSFMHPDI 1026
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL +D ++++ N L+ + V + G + L + + +++
Sbjct: 796 VLVAEDEWTTKQLIANYLEKAGYTVVATDQGKQVLTLAKIY--------------QPDVL 841
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D +P ++G+E+L KIK+ +++PVVV S +P + GA F+ KP+
Sbjct: 842 VLDILLPDLSGWEVLAKIKKDQETQDIPVVVCSV--LPEK-ERAFSLGAVDFIEKPV 895
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N +VT NG++A + L Q+ N+ ++LV
Sbjct: 94 VLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVL-----QDLTNH-------IDLV 141
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 142 LTEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKN 201
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 202 ELKILWQHVW 211
>gi|220906186|ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
Length = 406
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 10 SSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ 69
+S +SS +L VDD++++R ++ L+ V +ENG +AL+ L E Q
Sbjct: 163 ASGQASSEDLTGKILVVDDTLINRDLLSRRLERQGHTVKLSENGQQALQLL------ESQ 216
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
+ +LV+ D MP M G ELL+ +K++ K++PV+++S+ + C+E
Sbjct: 217 S--------FDLVLLDVIMPKMNGLELLRLMKDTPNWKDIPVIMISALDEVESAVRCIEL 268
Query: 130 GAQMFMLKPL 139
GA+ ++ KP
Sbjct: 269 GAEDYLTKPF 278
>gi|424884779|ref|ZP_18308390.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|424895445|ref|ZP_18319019.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393176541|gb|EJC76582.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393179672|gb|EJC79711.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 276
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AENG +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 190 MITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|424871123|ref|ZP_18294785.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166824|gb|EJC66871.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 276
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AE+G +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
VITDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 190 VITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|74318566|ref|YP_316306.1| signal transduction histidine kinase CheA-like protein [Thiobacillus
denitrificans ATCC 25259]
gi|74058061|gb|AAZ98501.1| CheA Signal Transduction Histidine Kinases (STHK) [Thiobacillus
denitrificans ATCC 25259]
Length = 1960
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 15 SSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
S+ P+PP VL VDDS+ RKI LL +V A++G+ AL E+ ++L
Sbjct: 1829 SAAPQPPLVLVVDDSLTVRKITTRLLSREGFRVDAAKDGVDAL---------EKMHDLIP 1879
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
++V+ D MP M G+EL + ++ + + VP+++++S N LE G ++
Sbjct: 1880 -----DVVLLDVEMPRMDGFELARVMRADARLASVPIIMITSRTADKHRNHALEIGVNVY 1934
Query: 135 MLKPLK 140
+ KP +
Sbjct: 1935 LGKPYQ 1940
>gi|361129951|gb|EHL01827.1| putative Hybrid signal transduction histidine kinase K [Glarea
lozoyensis 74030]
Length = 474
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P HVL V+D++V++K++ L+ + C V A +G ALEFL L G K+
Sbjct: 306 PKHVLVVEDNLVNQKVLSKQLRAAGCIVAVANHGREALEFL---QTTHFWTGLEDEGVKL 362
Query: 80 NLVITDYCMPGMTGYELLKKI----KESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
++V+ D MP M G ++KI KE + VPV+ V++ +I E G +
Sbjct: 363 SIVLMDLEMPVMDGLTCVQKIRELQKEGKMTSHVPVIAVTANARSEQIANAKEHGMDSVV 422
Query: 136 LKPLK 140
KP +
Sbjct: 423 TKPFR 427
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 14/129 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+I+ LL+ + KV +G++A E L V+L+
Sbjct: 54 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWELL------------KGRPHNVDLI 99
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL I E + K +PV+++SS++ + + +C+ GA +++KP++ +
Sbjct: 100 LTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKN 159
Query: 143 DVKKLTGHL 151
+++ L H+
Sbjct: 160 ELRNLWQHV 168
>gi|323139254|ref|ZP_08074308.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
gi|322395475|gb|EFX98022.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
Length = 539
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 14/133 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S + S+ P +L VDD+ +R +++ L+ V AENG AL + +Q Q
Sbjct: 182 SERETDSAASLPSRILVVDDNASNRDLLKRRLERQGHAVVLAENGSSALAIV----KQAQ 237
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+LV+ D MP ++G+++L +K ++++PV+++S+ N I C+E
Sbjct: 238 ----------FDLVLLDLLMPDISGFDVLSILKSDLSLRDIPVIMISALNEIDTIVRCIE 287
Query: 129 EGAQMFMLKPLKP 141
GA+ ++ KP +P
Sbjct: 288 AGAEDYLAKPFEP 300
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 20/139 (14%)
Query: 20 PPHV------LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
PP V + DDS R+I+ LL+ + KV +G++A E L
Sbjct: 34 PPRVALRILLVEADDST--RQIIAALLRKCSYKVAAVSDGLKAWE------------TLK 79
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQM 133
++LV+T+ +P ++G+ LL I E V K +PV+++SS + T + +C+ +GA
Sbjct: 80 GRPHNIDLVLTEVELPSISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAAD 139
Query: 134 FMLKPLKPSDVKKLTGHLI 152
F++KP++ ++++ L H+
Sbjct: 140 FLIKPVRKNELRNLWQHVW 158
>gi|241205123|ref|YP_002976219.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859013|gb|ACS56680.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 276
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AE+G +ALE L + L
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
VITDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 190 VITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|194334707|ref|YP_002016567.1| multi-sensor hybrid histidine kinase [Prosthecochloris aestuarii
DSM 271]
gi|194312525|gb|ACF46920.1| multi-sensor hybrid histidine kinase [Prosthecochloris aestuarii
DSM 271]
Length = 991
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
A S S KP +L V+DS+V+++++ +L + C V AENG+ AL+ LG
Sbjct: 721 APSEPEKESKQVKPLRILVVEDSVVNQQVLVAMLSKNGCSVDIAENGVEALKALG----- 775
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMK-EVPVVVVSSENIPTRI 123
T +LV+ D MP M G+E ++I+ E V+ ++ V+ V++ +
Sbjct: 776 ---------TTPYDLVLMDCQMPEMDGFEATRRIRSGEHGVLNPDIAVIAVTANAMKGDR 826
Query: 124 NECLEEGAQMFMLKPLKPSDV 144
CL G ++ KP++ SD+
Sbjct: 827 ERCLHAGMNDYIPKPVRTSDI 847
>gi|403381459|ref|ZP_10923516.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1069
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P+ P +L VDD V+ +++E +L +VT +G AL L D++E
Sbjct: 741 PRRPLILMVDDDPVNLQVMEAILSPDNYEVTMVTSGKEALAML---DKKEW--------- 788
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+LVI+D MP M+GYEL +KI+E + E+PV+++++ + I GA ++ K
Sbjct: 789 --DLVISDIMMPQMSGYELTRKIRERFTLTELPVLLLTARDQGKDIQAGFLAGANDYVAK 846
Query: 138 PLKPSDVK 145
P++ +++
Sbjct: 847 PVEALEIR 854
>gi|159184597|ref|NP_354083.2| two component response regulator [Agrobacterium fabrum str. C58]
gi|159139899|gb|AAK86868.2| two component response regulator [Agrobacterium fabrum str. C58]
Length = 430
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K VL VDD+ R + +L+ KV+ A +G RALE L S
Sbjct: 122 KRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL-------------SQDPS 168
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+ LVITDY MP M GYEL ++I++S +++ V+ +SS L+ GA F+ +P
Sbjct: 169 IQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYRP 228
Query: 139 LKPSDVK 145
P +++
Sbjct: 229 FVPEELQ 235
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ + AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQFIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|229523471|ref|ZP_04412876.1| signal transduction histidine kinase [Vibrio cholerae bv. albensis
VL426]
gi|229337052|gb|EEO02069.1| signal transduction histidine kinase [Vibrio cholerae bv. albensis
VL426]
Length = 572
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQKIVNVKKHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VLAVDD + K++ENLL+ +VTT + ALE L +E +N K +L
Sbjct: 22 RVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML-----RENRN-------KYDL 69
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VI+D MP M G++LL+ + + ++PV+++SS + + + GA ++LKP++
Sbjct: 70 VISDVNMPDMDGFKLLELV---GLEMDLPVIMLSSHGDKEFVFKGITHGAVDYLLKPVRL 126
Query: 142 SDVKKLTGHLI 152
++K + H+I
Sbjct: 127 EELKNIWQHVI 137
>gi|428217423|ref|YP_007101888.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
gi|427989205|gb|AFY69460.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
Length = 122
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ NLL++S +V +A +G+ AL + + +LV
Sbjct: 4 VLVVEDSITQRQMITNLLRDSGLRVVSAGDGVEALSQVA--------------NDRPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K+ + VPVV+ SS+ + +GA ++ KP +P
Sbjct: 50 VLDIVMPRMNGYEVCRRLKQDPETQLVPVVMCSSKGEEFDRYWGMRQGADAYIAKPFQPQ 109
Query: 143 DVKKLTGHLIN 153
++ L+
Sbjct: 110 ELVGTVKQLLR 120
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
+P VL V+D R ++LK+ V ENG +AL+ L +N
Sbjct: 2 DPSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVL------------VANH 49
Query: 77 TKVNLVITDYCMPGMTGYELLKKI-KESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
K +LV+ D +P MTG ELL +I K S+ + +P+V+ SS + CL +GA+ ++
Sbjct: 50 AKFDLVLCDVMLPVMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYL 109
Query: 136 LKPLKPSDVKKLTGHL 151
+KP++ + K L H+
Sbjct: 110 IKPIQVNTAKTLVRHV 125
>gi|13378328|gb|AAD47845.2|AF171076_1 probable CheY1 protein [Vibrio cholerae]
Length = 123
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVI 83
AVDDSI R++V + L+++ +V TA +G AL + + +++I
Sbjct: 9 FAVDDSISIRQMVSHTLQDAGYEVETAADGREALA--------------KAQKARFDVII 54
Query: 84 TDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSD 143
+D MP MTG+E +K ++ S K P++++++E P + E GA +++KP P
Sbjct: 55 SDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPET 114
Query: 144 VKK 146
+ K
Sbjct: 115 LLK 117
>gi|428301491|ref|YP_007139797.1| response regulator receiver protein [Calothrix sp. PCC 6303]
gi|428238035|gb|AFZ03825.1| response regulator receiver protein [Calothrix sp. PCC 6303]
Length = 160
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAE--NGMRALEFL----GLVDEQEQQNNL 72
+PP +L V+DS D + ++ L + NG AL FL D Q
Sbjct: 11 RPPLLLVVEDSNEDFEALQRYLDKYPLTIPVYRCVNGDDALAFLYHTGNYTDYQ------ 64
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
N + L++ D +PGM G E+L++IK+ +K +PVV+ ++ N P I C ++G
Sbjct: 65 --NAPRPGLIVLDLNLPGMDGREVLQQIKQDEDLKLIPVVIFTTSNSPKDIQACYKQGVN 122
Query: 133 MFMLKPLKPSDVKKLTGHLIN 153
+++KP+ + +K+ LI+
Sbjct: 123 SYIVKPMDAARLKRNIQTLID 143
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD KI+E LL++ VTT +ALE L N K +LV
Sbjct: 19 VLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALEL------------LRENKNKFDLV 66
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++S+ + P + + + GA ++LKP++
Sbjct: 67 ISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIE 123
Query: 143 DVKKLTGHLI 152
++K + H++
Sbjct: 124 ELKNIWQHVV 133
>gi|288960047|ref|YP_003450387.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
gi|288912355|dbj|BAI73843.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
Length = 748
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
++ + P H+L VDDSI R + +++L+ +VT +G ALE L
Sbjct: 620 AAEDAPPDRAHILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERL----------- 668
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
S G +V L+I+D MP M G+ LL+ +K + E+PVV+V+S L GA
Sbjct: 669 --SEGMEVELIISDVEMPRMDGFALLQAVKADRRLAEIPVVLVTSRASDEDRERGLRLGA 726
Query: 132 QMFMLK 137
+++K
Sbjct: 727 DAYIVK 732
>gi|335036577|ref|ZP_08529902.1| two component response regulator [Agrobacterium sp. ATCC 31749]
gi|333791960|gb|EGL63332.1| two component response regulator [Agrobacterium sp. ATCC 31749]
Length = 430
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K VL VDD+ R + +L+ KV+ A +G RALE L S
Sbjct: 122 KRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL-------------SQDPS 168
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+ LVITDY MP M GYEL ++I++S +++ V+ +SS L+ GA F+ +P
Sbjct: 169 IQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYRP 228
Query: 139 LKPSDVK 145
P +++
Sbjct: 229 FVPEELQ 235
>gi|428313379|ref|YP_007124356.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Microcoleus sp. PCC 7113]
gi|428254991|gb|AFZ20950.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Microcoleus sp. PCC 7113]
Length = 121
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK S VT A +G+ AL EQ Q+++ ++V
Sbjct: 4 VLVVEDSLAQRQMISDLLKGSGLTVTVASDGVEAL-------EQIQRSS-------PDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKADPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|383757563|ref|YP_005436548.1| chemotaxis protein CheY [Rubrivivax gelatinosus IL144]
gi|381378232|dbj|BAL95049.1| chemotaxis protein CheY [Rubrivivax gelatinosus IL144]
Length = 131
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSN 75
NP L VDD R+IV LLK C AE+G+ AL L
Sbjct: 2 NPSDLKFLIVDDFSTMRRIVRGLLKEMGCNNADEAEDGVVALNML--------------R 47
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+K + V++D MP M G+ELLK IK +K +PV++V++E I + GA ++
Sbjct: 48 ASKYDFVVSDINMPNMNGFELLKSIKADGSLKHIPVLMVTAEARKEDIVLAAQSGAAGYI 107
Query: 136 LKPL 139
+KP
Sbjct: 108 VKPF 111
>gi|226315436|ref|YP_002775332.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098386|dbj|BAH46828.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1050
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
A+ ++ N P +L VDD V+ +++E +L +VT +G AL LG
Sbjct: 695 ATKPTTLLEVNRDRPRLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAILGT---- 750
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
+ +LVI+D MP M+GYEL + I+E + E+PV+++++ + P I
Sbjct: 751 ----------GEWDLVISDIMMPQMSGYELTRMIRERFTLTELPVLLLTARSQPKDIQSG 800
Query: 127 LEEGAQMFMLKPLKPSDVK 145
GA ++ KP++ ++K
Sbjct: 801 FLAGANDYVTKPIEGMEIK 819
>gi|206890474|ref|YP_002248031.1| response regulator [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742412|gb|ACI21469.1| response regulator [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 500
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDD + K+++ +L +V A+NG ALE L + QN V+
Sbjct: 6 PVILCVDDEPQNLKLLQAILSPRGYEVLVAQNGFLALEIL------KNQN--------VD 51
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+V+ D MPGM GYE+ +KIKE ++ +PV+++++ +E G + F+ KP
Sbjct: 52 IVLLDVMMPGMDGYEVCRKIKEDETLRHIPVIMITALTAKEDRIRGIEAGTEEFLSKPFD 111
Query: 141 PSDV 144
+V
Sbjct: 112 VGEV 115
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+I+ LL+ + KV +G++A E L + E QN V+L+
Sbjct: 53 VLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEAL----KGEPQN--------VDLI 100
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++G+ LL I E + K++PV+++SS + + + +C+ +GA F++KP++ +
Sbjct: 101 LTEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKN 160
Query: 143 DVKKLTGHL 151
++ L H+
Sbjct: 161 ELXNLWQHV 169
>gi|254235813|ref|ZP_04929136.1| hypothetical protein PACG_01754 [Pseudomonas aeruginosa C3719]
gi|126167744|gb|EAZ53255.1| hypothetical protein PACG_01754 [Pseudomonas aeruginosa C3719]
Length = 786
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|424781512|ref|ZP_18208370.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Campylobacter showae
CSUNSWCD]
gi|421960798|gb|EKU12400.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Campylobacter showae
CSUNSWCD]
Length = 121
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L+ + + AE+G+ A + LG + +N+
Sbjct: 3 ILVVDDSSTMRRIIKNTLQRLGHQEILEAEHGVEAWQILG-------------QHSDINV 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ + ++P+++V++E + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEAKYVDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>gi|224370794|ref|YP_002604958.1| protein CheY [Desulfobacterium autotrophicum HRM2]
gi|223693511|gb|ACN16794.1| CheY [Desulfobacterium autotrophicum HRM2]
Length = 124
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 16/132 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
+L VDD R+I++N+LK K + A++G ALE L D Q V+
Sbjct: 6 KILIVDDFATMRRILKNILKQIGFKNILEADDGTTALEVL---DRQS-----------VD 51
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+I+D+ MP MTG ELLK ++ S K+ P ++V++E + E ++ G +++KP
Sbjct: 52 LIISDWNMPKMTGLELLKSVRASDRYKKTPFLMVTAEAQKQNVIEAVQAGVSNYVVKPFT 111
Query: 141 PSDV-KKLTGHL 151
+ +KLT L
Sbjct: 112 AEAISEKLTKIL 123
>gi|313201482|ref|YP_004040140.1| chea signal transduction histidine kinase [Methylovorus sp. MP688]
gi|312440798|gb|ADQ84904.1| CheA signal transduction histidine kinase [Methylovorus sp. MP688]
Length = 1847
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P+ P ++ VDDS+ RK++ LL+ +V A++GM AL+ L Q++L
Sbjct: 1724 PRAPEIMVVDDSLTMRKVLSRLLEREGYRVVVAKDGMDALQLL--------QDSLP---- 1771
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+L+++D MP M G+EL++ I+ S +P++++SS + E G ++ K
Sbjct: 1772 --DLILSDIEMPRMDGFELVRNIRGDSRTANIPLLIISSRTAEKHRSLARELGVNAYLGK 1829
Query: 138 PLKPSDV 144
P++ ++
Sbjct: 1830 PVQDDEL 1836
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDD IV +L+ +V T ++ M AL+ L + +L
Sbjct: 10 HILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALD------------TLRARKGYFDL 57
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD MP M G +L KK+ + ++PV+++S++ P+ I + LEEG +M+KP+
Sbjct: 58 VVTDLHMPQMNGLQLQKKVMQEF---KLPVIMMSADEKPSVILKSLEEGVAFYMVKPISL 114
Query: 142 SDVKKLTGHLI 152
DVK + + I
Sbjct: 115 DDVKHVWQYAI 125
>gi|371776078|ref|ZP_09482400.1| response regulator receiver protein [Anaerophaga sp. HS1]
Length = 121
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS R++V L+N V +G AL++L +G ++++
Sbjct: 5 VLIVDDSESIREVVNFTLQNEGYDVLVGVDGQDALQYL--------------DGRPIDII 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP M G EL++K++E K +P++ +++E+ + E + GA +++KP P+
Sbjct: 51 ITDLHMPNMDGLELIRKVREMDNYKHIPILFLTTESQAAKKMEAKQAGATGWIIKPFVPA 110
>gi|308274604|emb|CBX31203.1| hypothetical protein N47_E47150 [uncultured Desulfobacterium sp.]
Length = 470
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 4 CGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLV 63
G S SS N + V+ VDDS + RKIV L+ +V TAENG AL L+
Sbjct: 125 VGTVRSLLRKSSIN-RTRRVMVVDDSAMIRKIVGQGLEKKGFQVITAENGKAAL---ALI 180
Query: 64 DEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI 123
D +NL +L+++D MP M GY + + E S + ++P VV+S +R+
Sbjct: 181 D-----SNLP------HLILSDVNMPEMDGYAFCRAVHEDSGLSDIPFVVMSVRQEMSRV 229
Query: 124 NECLEEGAQMFMLKPL 139
L GA+ ++ KP
Sbjct: 230 RRMLSLGAEAYLFKPF 245
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RK++ L ++ A +G R F ++ SN V+LV
Sbjct: 16 ILIVDDSPTMRKVIILQLSTLDVEILVANDG-RLHGF-----------DMVSN-HPVDLV 62
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+TD MP M G L KK++ +P+V+ SS + I + GA ++ K
Sbjct: 63 VTDVDMPQMDGITLCKKLQADPKTDAIPIVIQSSFDSELNIEKGFNAGASAYISK 117
>gi|253999459|ref|YP_003051522.1| CheA signal transduction histidine kinase [Methylovorus
glucosetrophus SIP3-4]
gi|253986138|gb|ACT50995.1| CheA signal transduction histidine kinase [Methylovorus
glucosetrophus SIP3-4]
Length = 1758
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P+ P ++ VDDS+ RK++ LL+ +V A++GM AL+ L Q++L
Sbjct: 1635 PRAPEIMVVDDSLTMRKVLSRLLEREGYRVVVAKDGMDALQLL--------QDSLP---- 1682
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+L+++D MP M G+EL++ I+ S +P++++SS + E G ++ K
Sbjct: 1683 --DLILSDIEMPRMDGFELVRNIRGDSRTANIPLLIISSRTAEKHRSLARELGVNAYLGK 1740
Query: 138 PLKPSDV 144
P++ ++
Sbjct: 1741 PVQDDEL 1747
>gi|15614110|ref|NP_242413.1| hypothetical protein BH1547 [Bacillus halodurans C-125]
gi|10174164|dbj|BAB05266.1| BH1547 [Bacillus halodurans C-125]
Length = 661
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 6 VASSSSSSSSSNPKP--PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLV 63
+A+++ S + +P P +L VDD V+ K++ ++L N A +V T +G A+ L
Sbjct: 313 LAAATLSKPTISPVAYRPRILVVDDEPVNLKVIASILANEAYEVKTVISGEEAIAVL--- 369
Query: 64 DEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI 123
D +E +LV+ D MP M+GYEL K I++ + E+P++++++ + P I
Sbjct: 370 DTKEW-----------DLVVADVMMPKMSGYELTKNIRQRFTLTELPILLITARSRPEDI 418
Query: 124 NECLEEGAQMFMLKPL 139
GA ++ KP+
Sbjct: 419 ENGFRAGANDYLTKPV 434
>gi|126175395|ref|YP_001051544.1| putative CheW protein [Shewanella baltica OS155]
gi|153001700|ref|YP_001367381.1| putative CheW protein [Shewanella baltica OS185]
gi|160876438|ref|YP_001555754.1| putative CheW protein [Shewanella baltica OS195]
gi|217972364|ref|YP_002357115.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS223]
gi|373950525|ref|ZP_09610486.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS183]
gi|378709639|ref|YP_005274533.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS678]
gi|386323639|ref|YP_006019756.1| response regulator receiver modulated CheW protein [Shewanella
baltica BA175]
gi|386342138|ref|YP_006038504.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS117]
gi|418025496|ref|ZP_12664474.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS625]
gi|125998600|gb|ABN62675.1| putative CheW protein [Shewanella baltica OS155]
gi|151366318|gb|ABS09318.1| putative CheW protein [Shewanella baltica OS185]
gi|160861960|gb|ABX50494.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS195]
gi|217497499|gb|ACK45692.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS223]
gi|315268628|gb|ADT95481.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS678]
gi|333817784|gb|AEG10450.1| response regulator receiver modulated CheW protein [Shewanella
baltica BA175]
gi|334864539|gb|AEH15010.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS117]
gi|353535108|gb|EHC04672.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS625]
gi|373887125|gb|EHQ16017.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS183]
Length = 326
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RK++EN L+++ + TA++G ALE L + +Q+N S V+ V
Sbjct: 196 ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLMEFESLAEQDN-ASISDFVSAV 254
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS 116
ITD MP M G L+K+++ES +++P+V+ SS
Sbjct: 255 ITDVEMPRMDGMHLVKRLRESKAYQQMPIVMFSS 288
>gi|409993016|ref|ZP_11276175.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|409936121|gb|EKN77626.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 352
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
N P VL VDD+ ++R ++ L+ V A NG AL+ +
Sbjct: 2 NGNPDLVLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM--------------RS 47
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
T ++LV+ D MP M GY++L+ +K ++ +PV+++S+ N I C+E GA+ ++
Sbjct: 48 TPLDLVLLDIMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLS 107
Query: 137 KPL 139
KP
Sbjct: 108 KPF 110
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 14/129 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+I+ LL+ + KV +G++A E L V+L+
Sbjct: 53 LVEADDST--RQIIAALLRKCSYKVVAVPDGLKAWELL------------KGRPHNVDLI 98
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL I E + K +PV+++SS++ + + +C+ GA +++KP++ +
Sbjct: 99 LTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKN 158
Query: 143 DVKKLTGHL 151
+++ L H+
Sbjct: 159 ELRNLWQHV 167
>gi|170708012|ref|ZP_02898461.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0389]
gi|170127172|gb|EDS96050.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0389]
Length = 896
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 IMIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|222053660|ref|YP_002536022.1| chemotaxis protein CheA [Geobacter daltonii FRC-32]
gi|221562949|gb|ACM18921.1| CheA signal transduction histidine kinase [Geobacter daltonii
FRC-32]
Length = 685
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDSI R + ++L V A +G ALE GT +L
Sbjct: 567 RILVVDDSITTRTMERSILMAHGYDVDIAISGEDALE--------------KVAGTTYDL 612
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D MPG+TG+EL ++++ +EVP+++VSS E ++ GAQ +++K
Sbjct: 613 VISDVMMPGITGFELTRRLRAIEKYREVPIIIVSSLATDADKREAMDAGAQAYIVK 668
>gi|434400628|ref|YP_007134632.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
gi|428271725|gb|AFZ37666.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
Length = 573
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
+ S+S S +N +L VDD+ +R ++ +K +V TA NG + LE +
Sbjct: 161 SDSNSVISLTNQSEGKILVVDDNPTNRDLLSRQIKAQGYQVGTAANGQQVLELI------ 214
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
+ +L++ D MP M GY++LK +++S + +PV+++S+ + + +C
Sbjct: 215 --------QTGEYDLILLDIIMPEMDGYQVLKSLRDSQ-WRYIPVIMISALDQIDSVVKC 265
Query: 127 LEEGAQMFMLKPLKP 141
+E GA+ ++ KP P
Sbjct: 266 IEMGAEDYLAKPFNP 280
>gi|30261120|ref|NP_843497.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Ames]
gi|47526275|ref|YP_017624.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
'Ames Ancestor']
gi|49183954|ref|YP_027206.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Sterne]
gi|65318399|ref|ZP_00391358.1| COG0642: Signal transduction histidine kinase [Bacillus anthracis
str. A2012]
gi|165871661|ref|ZP_02216306.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0488]
gi|167635457|ref|ZP_02393770.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0442]
gi|167638936|ref|ZP_02397210.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0193]
gi|170687610|ref|ZP_02878826.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0465]
gi|177653531|ref|ZP_02935705.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0174]
gi|190566627|ref|ZP_03019544.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Tsiankovskii-I]
gi|227816148|ref|YP_002816157.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
CDC 684]
gi|229600347|ref|YP_002865551.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0248]
gi|254682823|ref|ZP_05146684.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
CNEVA-9066]
gi|254725609|ref|ZP_05187391.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A1055]
gi|254734235|ref|ZP_05191948.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Western North America USA6153]
gi|254740116|ref|ZP_05197808.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Kruger B]
gi|254753457|ref|ZP_05205493.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Vollum]
gi|254758554|ref|ZP_05210581.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Australia 94]
gi|386734815|ref|YP_006207996.1| Sensor protein [Bacillus anthracis str. H9401]
gi|421506933|ref|ZP_15953855.1| Sensor protein [Bacillus anthracis str. UR-1]
gi|421637616|ref|ZP_16078213.1| Sensor protein [Bacillus anthracis str. BF1]
gi|30254734|gb|AAP24983.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Ames]
gi|47501423|gb|AAT30099.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
'Ames Ancestor']
gi|49177881|gb|AAT53257.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Sterne]
gi|164712562|gb|EDR18094.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0488]
gi|167513066|gb|EDR88438.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0193]
gi|167529075|gb|EDR91829.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0442]
gi|170668423|gb|EDT19170.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0465]
gi|172081335|gb|EDT66409.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0174]
gi|190562179|gb|EDV16147.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
Tsiankovskii-I]
gi|227006998|gb|ACP16741.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
CDC 684]
gi|229264755|gb|ACQ46392.1| sensor histidine kinase/response regulator [Bacillus anthracis str.
A0248]
gi|384384667|gb|AFH82328.1| Sensor protein [Bacillus anthracis str. H9401]
gi|401823211|gb|EJT22359.1| Sensor protein [Bacillus anthracis str. UR-1]
gi|403395175|gb|EJY92414.1| Sensor protein [Bacillus anthracis str. BF1]
Length = 896
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ VDD + ++N LK + TA+NG+ LE L N T ++L+
Sbjct: 778 IMIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|427417143|ref|ZP_18907326.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425759856|gb|EKV00709.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 122
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS R+++ LL + V AE+G +A + + + +LV
Sbjct: 4 VLIVDDSSTLREMISGLLIKAGMTVLEAEDGEKAKDMI--------------SSRPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL + +K + K+VPVV+ SS+N +++GA ++ KP +P+
Sbjct: 50 VLDIVMPNMNGYELCRWVKNNGPTKDVPVVICSSKNEEFDRYWGMKQGADAYIAKPFRPA 109
Query: 143 DVKKLTGHLIN 153
++ + HL+
Sbjct: 110 EMVETVKHLLR 120
>gi|374999155|ref|YP_004974653.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
gi|357426580|emb|CBS89509.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
Length = 747
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNL 72
+ + P H+L VDDSI R + +++L+ +VT +G ALE L
Sbjct: 620 AEEATPARAHILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERL------------ 667
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
S G +V L+I+D MP M G+ LL+ +K + E+PV++V+S L GA
Sbjct: 668 -SEGMEVGLIISDVEMPRMDGFALLQAVKADKHLAEIPVILVTSRASDEDRERGLRLGAD 726
Query: 133 MFMLK 137
+++K
Sbjct: 727 AYIVK 731
>gi|422652299|ref|ZP_16715084.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330965367|gb|EGH65627.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 641
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
S+ ++ K +L V+D+ V+R +V+ +L N CKV A NG+ A+
Sbjct: 504 SALDAHGKERSILLVEDNPVNRTVVQAMLHNLGCKVDVAVNGVEAV-------------- 549
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ + L++ D +P M GYE +KI++ S ++ +P++ +++ + + CL+ G
Sbjct: 550 MKAGAGNYALILMDCRLPVMDGYEATRKIRQLSGLERIPIIALTANALQGDRDACLQAGM 609
Query: 132 QMFMLKPLKPSDVKKL 147
++ KP K +D++++
Sbjct: 610 DDYLPKPFKHADLQQV 625
>gi|300022157|ref|YP_003754768.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299523978|gb|ADJ22447.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 456
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD + + K++E L+ +V TA +G +AL+ L E+E V++V
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGRQALDLL----ERES----------VDVV 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MPGM G+E + IK S +PVV+V++ + P+ + LE GA F+ KP+
Sbjct: 51 LLDVMMPGMDGFETCRHIKASHATHHIPVVMVTALDQPSDKVQGLESGADDFLTKPV 107
>gi|147674610|ref|YP_001217001.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
gi|227117911|ref|YP_002819807.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
gi|146316493|gb|ABQ21032.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
gi|227013361|gb|ACP09571.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
Length = 514
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 383 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 435
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 436 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 487
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 488 DAGMNDIVLKPIRSKDIMEVVKRFLN 513
>gi|404497559|ref|YP_006721665.1| sensor histidine kinase CheA and response receiver CheY associated
with MCPs of class 40H [Geobacter metallireducens GS-15]
gi|78195161|gb|ABB32928.1| sensor histidine kinase CheA and response receiver CheY associated
with MCPs of class 40H [Geobacter metallireducens GS-15]
Length = 777
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 14/118 (11%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P +L V+DSI R +++N+L+ + +V TA +G+ AL LG D
Sbjct: 658 PRSILVVEDSITARTLLKNILEAAGYRVKTAVDGVDALTLLGTED--------------F 703
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+LV++D MP M G+EL +I+ES + E+PVV+V+S + ++ GA +++K
Sbjct: 704 DLVVSDVDMPRMNGFELTGRIRESRQLAELPVVLVTSLDSREDRERGVDAGANAYIVK 761
>gi|121728449|ref|ZP_01681475.1| sensor histidine kinase/response regulator [Vibrio cholerae V52]
gi|121629273|gb|EAX61708.1| sensor histidine kinase/response regulator [Vibrio cholerae V52]
Length = 406
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 275 SASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 327
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 328 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 379
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 380 DAGMNDIVLKPIRSKDIMEVVKRFLN 405
>gi|427716544|ref|YP_007064538.1| CheA signal transduction histidine kinase [Calothrix sp. PCC 7507]
gi|427348980|gb|AFY31704.1| CheA signal transduction histidine kinase [Calothrix sp. PCC 7507]
Length = 1199
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 13/139 (9%)
Query: 15 SSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
S N P VL VDD+I R+ + L+ S+ +V A+NG+ ALE L L E
Sbjct: 1072 SKNKSPKVVLIVDDAISLRQTISLTLQKSSYQVLQAQNGVEALEQLQLHPE--------- 1122
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+ +VI+D MP M G+ELL I+++ ++PVV+++S + GA +
Sbjct: 1123 ----IQVVISDLEMPRMNGFELLSNIRQNPNFAKLPVVILTSRSAEKHRLLAQSLGATAY 1178
Query: 135 MLKPLKPSDVKKLTGHLIN 153
+ KP G+LIN
Sbjct: 1179 LTKPYLEDKFLSTVGNLIN 1197
>gi|373854676|ref|ZP_09597474.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
gi|372472543|gb|EHP32555.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
Length = 502
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
+S+S P P +L VDD+ +R ++ L+ V TA +G ALE L
Sbjct: 103 SSASFPQDRPAPVPGRILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERL------ 156
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
+LV+ D MP + GY L IK ++ +PV+++S+ + + C
Sbjct: 157 --------RAGPFDLVLLDMMMPVLDGYGALDAIKTDPALRHLPVIMISALDELASVVRC 208
Query: 127 LEEGAQMFMLKPLKPSDVKKLTG 149
+E GA+ F+ KP P+ ++ G
Sbjct: 209 IERGAEDFLPKPFNPTLLRARIG 231
>gi|255745823|ref|ZP_05419771.1| signal transduction histidine kinase [Vibrio cholera CIRS 101]
gi|262153458|ref|ZP_06028589.1| signal transduction histidine kinase [Vibrio cholerae INDRE 91/1]
gi|360035340|ref|YP_004937103.1| sensor histidine kinase/response regulator [Vibrio cholerae O1 str.
2010EL-1786]
gi|417813458|ref|ZP_12460114.1| his Kinase A domain protein [Vibrio cholerae HC-49A2]
gi|417816322|ref|ZP_12462954.1| his Kinase A domain protein [Vibrio cholerae HCUF01]
gi|418337213|ref|ZP_12946111.1| his Kinase A domain protein [Vibrio cholerae HC-23A1]
gi|418344731|ref|ZP_12950513.1| his Kinase A domain protein [Vibrio cholerae HC-28A1]
gi|418348881|ref|ZP_12953615.1| his Kinase A domain protein [Vibrio cholerae HC-43A1]
gi|419825923|ref|ZP_14349427.1| his Kinase A domain protein [Vibrio cholerae CP1033(6)]
gi|421316436|ref|ZP_15767007.1| his Kinase A domain protein [Vibrio cholerae CP1032(5)]
gi|421325042|ref|ZP_15775568.1| his Kinase A domain protein [Vibrio cholerae CP1041(14)]
gi|421328702|ref|ZP_15779216.1| his Kinase A domain protein [Vibrio cholerae CP1042(15)]
gi|421331726|ref|ZP_15782206.1| his Kinase A domain protein [Vibrio cholerae CP1046(19)]
gi|422891554|ref|ZP_16933927.1| his Kinase A domain protein [Vibrio cholerae HC-40A1]
gi|422902761|ref|ZP_16937755.1| his Kinase A domain protein [Vibrio cholerae HC-48A1]
gi|422906644|ref|ZP_16941468.1| his Kinase A domain protein [Vibrio cholerae HC-70A1]
gi|422913223|ref|ZP_16947740.1| his Kinase A domain protein [Vibrio cholerae HFU-02]
gi|422925703|ref|ZP_16958726.1| his Kinase A domain protein [Vibrio cholerae HC-38A1]
gi|423145026|ref|ZP_17132633.1| his Kinase A domain protein [Vibrio cholerae HC-19A1]
gi|423149701|ref|ZP_17137029.1| his Kinase A domain protein [Vibrio cholerae HC-21A1]
gi|423153514|ref|ZP_17140708.1| his Kinase A domain protein [Vibrio cholerae HC-22A1]
gi|423156329|ref|ZP_17143433.1| his Kinase A domain protein [Vibrio cholerae HC-32A1]
gi|423731010|ref|ZP_17704322.1| his Kinase A domain protein [Vibrio cholerae HC-17A1]
gi|423892699|ref|ZP_17726379.1| his Kinase A domain protein [Vibrio cholerae HC-62A1]
gi|423927618|ref|ZP_17730997.1| his Kinase A domain protein [Vibrio cholerae HC-77A1]
gi|424002347|ref|ZP_17745431.1| his Kinase A domain protein [Vibrio cholerae HC-17A2]
gi|424006181|ref|ZP_17749159.1| his Kinase A domain protein [Vibrio cholerae HC-37A1]
gi|424024199|ref|ZP_17763857.1| his Kinase A domain protein [Vibrio cholerae HC-62B1]
gi|424027048|ref|ZP_17766659.1| his Kinase A domain protein [Vibrio cholerae HC-69A1]
gi|424586323|ref|ZP_18025910.1| his Kinase A domain protein [Vibrio cholerae CP1030(3)]
gi|424595025|ref|ZP_18034357.1| his Kinase A domain protein [Vibrio cholerae CP1040(13)]
gi|424598893|ref|ZP_18038082.1| his Kinase A domain protein [Vibrio Cholerae CP1044(17)]
gi|424606621|ref|ZP_18045579.1| his Kinase A domain protein [Vibrio cholerae CP1050(23)]
gi|424617247|ref|ZP_18055931.1| his Kinase A domain protein [Vibrio cholerae HC-42A1]
gi|424652716|ref|ZP_18090150.1| his Kinase A domain protein [Vibrio cholerae HC-57A2]
gi|440709697|ref|ZP_20890354.1| signal transduction histidine kinase [Vibrio cholerae 4260B]
gi|443503533|ref|ZP_21070509.1| his Kinase A domain protein [Vibrio cholerae HC-64A1]
gi|443507432|ref|ZP_21074214.1| his Kinase A domain protein [Vibrio cholerae HC-65A1]
gi|443511562|ref|ZP_21078214.1| his Kinase A domain protein [Vibrio cholerae HC-67A1]
gi|443515117|ref|ZP_21081641.1| his Kinase A domain protein [Vibrio cholerae HC-68A1]
gi|443518910|ref|ZP_21085319.1| his Kinase A domain protein [Vibrio cholerae HC-71A1]
gi|443523805|ref|ZP_21090028.1| his Kinase A domain protein [Vibrio cholerae HC-72A2]
gi|443538753|ref|ZP_21104608.1| his Kinase A domain protein [Vibrio cholerae HC-81A1]
gi|449056073|ref|ZP_21734741.1| Signal transduction histidine kinase [Vibrio cholerae O1 str. Inaba
G4222]
gi|255736898|gb|EET92295.1| signal transduction histidine kinase [Vibrio cholera CIRS 101]
gi|262030759|gb|EEY49392.1| signal transduction histidine kinase [Vibrio cholerae INDRE 91/1]
gi|340041044|gb|EGR02013.1| his Kinase A domain protein [Vibrio cholerae HC-49A2]
gi|340042048|gb|EGR03014.1| his Kinase A domain protein [Vibrio cholerae HCUF01]
gi|341623146|gb|EGS48712.1| his Kinase A domain protein [Vibrio cholerae HC-70A1]
gi|341623183|gb|EGS48748.1| his Kinase A domain protein [Vibrio cholerae HC-48A1]
gi|341624209|gb|EGS49717.1| his Kinase A domain protein [Vibrio cholerae HC-40A1]
gi|341639295|gb|EGS63916.1| his Kinase A domain protein [Vibrio cholerae HFU-02]
gi|341647141|gb|EGS71231.1| his Kinase A domain protein [Vibrio cholerae HC-38A1]
gi|356419366|gb|EHH72914.1| his Kinase A domain protein [Vibrio cholerae HC-21A1]
gi|356424428|gb|EHH77834.1| his Kinase A domain protein [Vibrio cholerae HC-19A1]
gi|356430615|gb|EHH83821.1| his Kinase A domain protein [Vibrio cholerae HC-22A1]
gi|356432791|gb|EHH85988.1| his Kinase A domain protein [Vibrio cholerae HC-23A1]
gi|356435929|gb|EHH89065.1| his Kinase A domain protein [Vibrio cholerae HC-28A1]
gi|356441729|gb|EHH94617.1| his Kinase A domain protein [Vibrio cholerae HC-32A1]
gi|356447620|gb|EHI00411.1| his Kinase A domain protein [Vibrio cholerae HC-43A1]
gi|356646494|gb|AET26549.1| sensor histidine kinase/response regulator [Vibrio cholerae O1 str.
2010EL-1786]
gi|395920712|gb|EJH31534.1| his Kinase A domain protein [Vibrio cholerae CP1041(14)]
gi|395921393|gb|EJH32213.1| his Kinase A domain protein [Vibrio cholerae CP1032(5)]
gi|395930208|gb|EJH40957.1| his Kinase A domain protein [Vibrio cholerae CP1042(15)]
gi|395932990|gb|EJH43733.1| his Kinase A domain protein [Vibrio cholerae CP1046(19)]
gi|395961148|gb|EJH71490.1| his Kinase A domain protein [Vibrio cholerae HC-57A2]
gi|395963999|gb|EJH74244.1| his Kinase A domain protein [Vibrio cholerae HC-42A1]
gi|395975055|gb|EJH84553.1| his Kinase A domain protein [Vibrio cholerae CP1030(3)]
gi|408033657|gb|EKG70189.1| his Kinase A domain protein [Vibrio cholerae CP1040(13)]
gi|408043205|gb|EKG79213.1| his Kinase A domain protein [Vibrio Cholerae CP1044(17)]
gi|408044486|gb|EKG80399.1| his Kinase A domain protein [Vibrio cholerae CP1050(23)]
gi|408610004|gb|EKK83380.1| his Kinase A domain protein [Vibrio cholerae CP1033(6)]
gi|408625152|gb|EKK98072.1| his Kinase A domain protein [Vibrio cholerae HC-17A1]
gi|408655775|gb|EKL26883.1| his Kinase A domain protein [Vibrio cholerae HC-77A1]
gi|408657261|gb|EKL28347.1| his Kinase A domain protein [Vibrio cholerae HC-62A1]
gi|408846748|gb|EKL86833.1| his Kinase A domain protein [Vibrio cholerae HC-37A1]
gi|408847073|gb|EKL87146.1| his Kinase A domain protein [Vibrio cholerae HC-17A2]
gi|408871210|gb|EKM10454.1| his Kinase A domain protein [Vibrio cholerae HC-62B1]
gi|408879734|gb|EKM18685.1| his Kinase A domain protein [Vibrio cholerae HC-69A1]
gi|439975286|gb|ELP51422.1| signal transduction histidine kinase [Vibrio cholerae 4260B]
gi|443432125|gb|ELS74659.1| his Kinase A domain protein [Vibrio cholerae HC-64A1]
gi|443435964|gb|ELS82089.1| his Kinase A domain protein [Vibrio cholerae HC-65A1]
gi|443439504|gb|ELS89205.1| his Kinase A domain protein [Vibrio cholerae HC-67A1]
gi|443443605|gb|ELS96894.1| his Kinase A domain protein [Vibrio cholerae HC-68A1]
gi|443447461|gb|ELT04104.1| his Kinase A domain protein [Vibrio cholerae HC-71A1]
gi|443450207|gb|ELT10488.1| his Kinase A domain protein [Vibrio cholerae HC-72A2]
gi|443466342|gb|ELT41001.1| his Kinase A domain protein [Vibrio cholerae HC-81A1]
gi|448264409|gb|EMB01647.1| Signal transduction histidine kinase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 570
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|383759784|ref|YP_005438770.1| chemotaxis protein CheY [Rubrivivax gelatinosus IL144]
gi|381380454|dbj|BAL97271.1| chemotaxis protein CheY [Rubrivivax gelatinosus IL144]
Length = 120
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDS R++V LKN+ +V A +G A E +N NLV
Sbjct: 4 ILAVDDSASMRQMVSFTLKNAGFQVVEAVDGQDAYE--------------KANQRDFNLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP M G L KK++E+ K P++++++E+ GA +++KP P+
Sbjct: 50 LTDQNMPRMDGISLTKKLRENPKFKATPILILTTESSDQMKQAGRAAGATGWLVKPFDPA 109
Query: 143 DVKKLTGHLIN 153
+ ++ G +I
Sbjct: 110 KLVEVIGKVIR 120
>gi|335424073|ref|ZP_08553090.1| chemotaxis regulatory protein CheY [Salinisphaera shabanensis
E1L3A]
gi|334890503|gb|EGM28770.1| chemotaxis regulatory protein CheY [Salinisphaera shabanensis
E1L3A]
Length = 129
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K + L VDD R+IV NLLK V AE+G+ ALE L N
Sbjct: 4 KNLNFLVVDDFSTMRRIVRNLLKELGYNNVEEAEDGVDALEKL--------------NTG 49
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
K V++D+ MP + G E+LK+I+ S +K++PV++V++E I + GA +++K
Sbjct: 50 KFQFVVSDWNMPNLDGLEMLKRIRASDTLKDLPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFSAA 114
>gi|424590938|ref|ZP_18030371.1| his Kinase A domain protein [Vibrio cholerae CP1037(10)]
gi|408033620|gb|EKG70154.1| his Kinase A domain protein [Vibrio cholerae CP1037(10)]
Length = 570
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|347836543|emb|CCD51115.1| histidine kinase-group XI protein, partial sequence [Botryotinia
fuckeliana]
Length = 631
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S S S ++ P H+L V+D+IV++K++ L+++ C V+ A +G+ ALEFL ++
Sbjct: 457 SRRSQSPASSAPKHILIVEDNIVNQKVLSKQLRSAGCIVSVANHGLEALEFL---EKSTF 513
Query: 69 QNNL--NSNGTKVNLVITDYCMPGMTGYELLKKI----KESSVMKEVPVVVVSSENIPTR 122
+L +G N+++ D MP M G +++I +E V VPV+ V++ +
Sbjct: 514 STSLPEGVSGIPCNILLMDLEMPIMDGLTCVRQIRKWEREGRVKGRVPVIAVTANARSEQ 573
Query: 123 INECLEEGAQMFMLKPLK 140
I E G + KP +
Sbjct: 574 IARAKEAGMDSVVTKPFR 591
>gi|291295299|ref|YP_003506697.1| response regulator receiver protein [Meiothermus ruber DSM 1279]
gi|290470258|gb|ADD27677.1| response regulator receiver protein [Meiothermus ruber DSM 1279]
Length = 118
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 19/126 (15%)
Query: 23 VLAVDDSIVDRKIVENLLK--NSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
++AVDDS+ D K++E L + +EN + +E K +
Sbjct: 4 LIAVDDSMADLKLIEQSLAPYHQVILYQGSENVEQRIE-----------------AEKPD 46
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
V+ D MPG GYE+L+ ++ + K +PV+++SS+N PT I +GA ++ KP
Sbjct: 47 AVLLDVVMPGRNGYEVLRALRRNESTKHIPVLIISSKNAPTDIEWGKRQGANGYLTKPYT 106
Query: 141 PSDVKK 146
P D++K
Sbjct: 107 PEDLRK 112
>gi|171059161|ref|YP_001791510.1| PAS/PAC sensor hybrid histidine kinase [Leptothrix cholodnii SP-6]
gi|170776606|gb|ACB34745.1| PAS/PAC sensor hybrid histidine kinase [Leptothrix cholodnii SP-6]
Length = 846
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD ++R++ +L+++ VT A NGM ALE L Q++ V+LV
Sbjct: 729 VLLVDDEPINREVAAEILEDAGFDVTLASNGMEALERL-------QRH-------PVDLV 774
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D MPGM G ++I++ +P++ +++ ECL G F+ KP+ P
Sbjct: 775 IMDIQMPGMDGLTTTRRIRQMPDRAHLPIIAMTANAFAEDETECLNAGMNAFIPKPIDPE 834
Query: 143 DVKKL 147
+ ++
Sbjct: 835 RLYRI 839
>gi|374620319|ref|ZP_09692853.1| family 3 adenylate cyclase [gamma proteobacterium HIMB55]
gi|374303546|gb|EHQ57730.1| family 3 adenylate cyclase [gamma proteobacterium HIMB55]
Length = 475
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD + ++ LL+ C V TAE+G +AL L V+LV
Sbjct: 120 VLVVDDLPENLDLMSRLLRKMHCSVITAESGEQALGLLA--------------SEPVDLV 165
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP + G E+L +IK+S ++ +PV+++S +I +C++ GA ++LKP+
Sbjct: 166 LLDLVMPNIDGREVLARIKQSEQLRAIPVIMISGRQDMDQIVDCIQVGADDYLLKPV 222
>gi|384424550|ref|YP_005633908.1| Signal transduction histidine kinase [Vibrio cholerae LMA3984-4]
gi|327484103|gb|AEA78510.1| Signal transduction histidine kinase [Vibrio cholerae LMA3984-4]
Length = 570
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 SASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|116050828|ref|YP_790349.1| sensor/response regulator hybrid [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421173978|ref|ZP_15631713.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CI27]
gi|115586049|gb|ABJ12064.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404535027|gb|EKA44740.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CI27]
Length = 786
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTAGEQRDTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|120597448|ref|YP_962022.1| response regulator receiver protein [Shewanella sp. W3-18-1]
gi|146294411|ref|YP_001184835.1| response regulator receiver protein [Shewanella putrefaciens CN-32]
gi|386315140|ref|YP_006011305.1| response regulator receiver protein [Shewanella putrefaciens 200]
gi|120557541|gb|ABM23468.1| response regulator receiver protein [Shewanella sp. W3-18-1]
gi|145566101|gb|ABP77036.1| response regulator receiver protein [Shewanella putrefaciens CN-32]
gi|319427765|gb|ADV55839.1| response regulator receiver protein [Shewanella putrefaciens 200]
Length = 265
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS + R +++ + N K +T AE+G +A+E + +NN+ +L
Sbjct: 147 VLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAIELM--------RNNM------FDL 192
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITDY MP + G L + I+ S +P+++VSSE T ++ + G KP +P
Sbjct: 193 VITDYNMPSIDGLALTQFIRNESQQSHIPILMVSSEANDTHLSNVSQAGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
VK+L L+
Sbjct: 253 QLVKQLLFQLL 263
>gi|254226277|ref|ZP_04919869.1| sensor histidine kinase/response regulator [Vibrio cholerae V51]
gi|125621191|gb|EAZ49533.1| sensor histidine kinase/response regulator [Vibrio cholerae V51]
Length = 572
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|15641456|ref|NP_231088.1| sensor histidine kinase/response regulator [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121588029|ref|ZP_01677780.1| sensor histidine kinase/response regulator [Vibrio cholerae
2740-80]
gi|153817899|ref|ZP_01970566.1| sensor histidine kinase/response regulator [Vibrio cholerae NCTC
8457]
gi|153822685|ref|ZP_01975352.1| sensor histidine kinase/response regulator [Vibrio cholerae B33]
gi|227081617|ref|YP_002810168.1| sensor histidine kinase/response regulator [Vibrio cholerae M66-2]
gi|229504980|ref|ZP_04394490.1| signal transduction histidine kinase [Vibrio cholerae BX 330286]
gi|229511351|ref|ZP_04400830.1| signal transduction histidine kinase [Vibrio cholerae B33]
gi|229518469|ref|ZP_04407913.1| signal transduction histidine kinase [Vibrio cholerae RC9]
gi|229607983|ref|YP_002878631.1| signal transduction histidine kinase [Vibrio cholerae MJ-1236]
gi|254848565|ref|ZP_05237915.1| sensor histidine kinase/response regulator [Vibrio cholerae MO10]
gi|298498476|ref|ZP_07008283.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|298499372|ref|ZP_07009178.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|379741240|ref|YP_005333209.1| signal transduction histidine kinase [Vibrio cholerae IEC224]
gi|418332472|ref|ZP_12943404.1| his Kinase A domain protein [Vibrio cholerae HC-06A1]
gi|418354975|ref|ZP_12957696.1| his Kinase A domain protein [Vibrio cholerae HC-61A1]
gi|421321047|ref|ZP_15771604.1| his Kinase A domain protein [Vibrio cholerae CP1038(11)]
gi|421335301|ref|ZP_15785767.1| his Kinase A domain protein [Vibrio cholerae CP1048(21)]
gi|421339191|ref|ZP_15789626.1| his Kinase A domain protein [Vibrio cholerae HC-20A2]
gi|421347377|ref|ZP_15797759.1| his Kinase A domain protein [Vibrio cholerae HC-46A1]
gi|423160153|ref|ZP_17147121.1| his Kinase A domain protein [Vibrio cholerae HC-33A2]
gi|423164879|ref|ZP_17151630.1| his Kinase A domain protein [Vibrio cholerae HC-48B2]
gi|424601623|ref|ZP_18040775.1| his Kinase A domain protein [Vibrio cholerae CP1047(20)]
gi|424610451|ref|ZP_18049302.1| his Kinase A domain protein [Vibrio cholerae HC-39A1]
gi|424613258|ref|ZP_18052059.1| his Kinase A domain protein [Vibrio cholerae HC-41A1]
gi|424622022|ref|ZP_18060543.1| his Kinase A domain protein [Vibrio cholerae HC-47A1]
gi|424644993|ref|ZP_18082741.1| his Kinase A domain protein [Vibrio cholerae HC-56A2]
gi|424656576|ref|ZP_18093874.1| his Kinase A domain protein [Vibrio cholerae HC-81A2]
gi|443531410|ref|ZP_21097425.1| his Kinase A domain protein [Vibrio cholerae HC-7A1]
gi|443535192|ref|ZP_21101081.1| his Kinase A domain protein [Vibrio cholerae HC-80A1]
gi|9655945|gb|AAF94602.1| sensor histidine kinase/response regulator [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547724|gb|EAX57816.1| sensor histidine kinase/response regulator [Vibrio cholerae
2740-80]
gi|126511526|gb|EAZ74120.1| sensor histidine kinase/response regulator [Vibrio cholerae NCTC
8457]
gi|126519805|gb|EAZ77028.1| sensor histidine kinase/response regulator [Vibrio cholerae B33]
gi|227009505|gb|ACP05717.1| sensor histidine kinase/response regulator [Vibrio cholerae M66-2]
gi|229345184|gb|EEO10158.1| signal transduction histidine kinase [Vibrio cholerae RC9]
gi|229351316|gb|EEO16257.1| signal transduction histidine kinase [Vibrio cholerae B33]
gi|229357203|gb|EEO22120.1| signal transduction histidine kinase [Vibrio cholerae BX 330286]
gi|229370638|gb|ACQ61061.1| signal transduction histidine kinase [Vibrio cholerae MJ-1236]
gi|254844270|gb|EET22684.1| sensor histidine kinase/response regulator [Vibrio cholerae MO10]
gi|297541353|gb|EFH77404.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|297542809|gb|EFH78859.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|356419031|gb|EHH72601.1| his Kinase A domain protein [Vibrio cholerae HC-06A1]
gi|356448484|gb|EHI01254.1| his Kinase A domain protein [Vibrio cholerae HC-33A2]
gi|356453377|gb|EHI06040.1| his Kinase A domain protein [Vibrio cholerae HC-61A1]
gi|356454260|gb|EHI06912.1| his Kinase A domain protein [Vibrio cholerae HC-48B2]
gi|378794750|gb|AFC58221.1| signal transduction histidine kinase [Vibrio cholerae IEC224]
gi|395924029|gb|EJH34840.1| his Kinase A domain protein [Vibrio cholerae CP1038(11)]
gi|395936255|gb|EJH46983.1| his Kinase A domain protein [Vibrio cholerae CP1048(21)]
gi|395944139|gb|EJH54813.1| his Kinase A domain protein [Vibrio cholerae HC-20A2]
gi|395946437|gb|EJH57101.1| his Kinase A domain protein [Vibrio cholerae HC-46A1]
gi|395960065|gb|EJH70456.1| his Kinase A domain protein [Vibrio cholerae HC-56A2]
gi|395971892|gb|EJH81521.1| his Kinase A domain protein [Vibrio cholerae HC-47A1]
gi|395977172|gb|EJH86594.1| his Kinase A domain protein [Vibrio cholerae CP1047(20)]
gi|408008119|gb|EKG46136.1| his Kinase A domain protein [Vibrio cholerae HC-39A1]
gi|408014252|gb|EKG51911.1| his Kinase A domain protein [Vibrio cholerae HC-41A1]
gi|408055179|gb|EKG90119.1| his Kinase A domain protein [Vibrio cholerae HC-81A2]
gi|443458493|gb|ELT25889.1| his Kinase A domain protein [Vibrio cholerae HC-7A1]
gi|443461655|gb|ELT32717.1| his Kinase A domain protein [Vibrio cholerae HC-80A1]
Length = 572
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|297579033|ref|ZP_06940961.1| sensor histidine kinase/response regulator [Vibrio cholerae RC385]
gi|297536627|gb|EFH75460.1| sensor histidine kinase/response regulator [Vibrio cholerae RC385]
Length = 572
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 SASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 66/106 (62%), Gaps = 12/106 (11%)
Query: 47 VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVM 106
V +A+NG +A +L +++ NN ++LV+T+ MPG++G LL +I ++
Sbjct: 37 VISAKNGQQAWAYL-----EDKGNN-------IDLVLTEVFMPGVSGISLLSRIMRHNIF 84
Query: 107 KEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
K +PV+++SS + + + +CL +GA F++KP++ +++K L H+
Sbjct: 85 KNIPVIMMSSSDDMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 130
>gi|392548139|ref|ZP_10295276.1| response regulator receiver protein [Pseudoalteromonas rubra ATCC
29570]
Length = 122
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R++V L + +V A +G AL L G+KV+L+
Sbjct: 5 ILVVDDSDSLRQVVNIALTGAGYQVIEACDGKDALSKL--------------TGSKVHLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G E +K +K+ K PV+++++EN + + E + GA+ +M+KP KP+
Sbjct: 51 ISDVNMPNMNGIEFVKNVKQLPQYKFTPVIMLTTENQQSMMEEGKKAGAKAWMVKPFKPA 110
Query: 143 DVKKLTGHLI 152
+ + L+
Sbjct: 111 QMLQAVSKLL 120
>gi|262169261|ref|ZP_06036953.1| signal transduction histidine kinase [Vibrio cholerae RC27]
gi|262022074|gb|EEY40783.1| signal transduction histidine kinase [Vibrio cholerae RC27]
Length = 570
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|434400013|ref|YP_007134017.1| response regulator receiver protein [Stanieria cyanosphaera PCC
7437]
gi|428271110|gb|AFZ37051.1| response regulator receiver protein [Stanieria cyanosphaera PCC
7437]
Length = 121
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK S KV A +G+ ALE L +LV
Sbjct: 4 VLIVEDSLAQRQMISDLLKGSGLKVVVACDGVEALEHL--------------EKFSPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K + VPVV+ SS+ +++GA ++ KP +P
Sbjct: 50 VMDIVMPRMNGYELCRRLKADPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPV 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|354565137|ref|ZP_08984312.1| response regulator receiver protein [Fischerella sp. JSC-11]
gi|353549096|gb|EHC18538.1| response regulator receiver protein [Fischerella sp. JSC-11]
Length = 121
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ ALE + + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHATDGVEALEAIQIAPP--------------DLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|253700420|ref|YP_003021609.1| response regulator receiver protein [Geobacter sp. M21]
gi|251775270|gb|ACT17851.1| response regulator receiver protein [Geobacter sp. M21]
Length = 292
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
+A ++ P+ +L V+D + R++V +L C V TA +GM A
Sbjct: 148 AIARHYLGQPATGPEGKTILLVEDDQLSREMVAKILTKHGCSVETAIDGMDAFA------ 201
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
K LVITD MP + GYE L I+ + +PV+++++ P
Sbjct: 202 --------KIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPVILMTAAATPDEEK 253
Query: 125 ECLEEGAQMFMLKPLK 140
E LE+G F+LKP+K
Sbjct: 254 EALEKGFFDFVLKPVK 269
>gi|434399888|ref|YP_007133892.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
gi|428270985|gb|AFZ36926.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
Length = 977
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 18/149 (12%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
+ S + SS SS +L +DS+ R+++E +L +V +G AL+ L +
Sbjct: 845 IPSPTLSSQSST-----ILIAEDSVATRRMLEKILSAVGYQVIVCRDGQEALDVL----D 895
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
Q Q T+++LV++D MP + G+ELL+KI+ V +E+PVV+ +S +
Sbjct: 896 QHQ--------TRIDLVLSDIEMPRVNGFELLQKIRSHPVWEEIPVVMATSRTGDRHRQQ 947
Query: 126 CLEEGAQMFMLKPLKPSD-VKKLTGHLIN 153
++ GA ++ KP++P + ++K+ L+N
Sbjct: 948 AMDLGATGYLGKPIQPQELLEKVESLLLN 976
>gi|430004644|emb|CCF20443.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Rhizobium sp.]
Length = 525
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD V R++++N L+ V TAENG+ L F L G ++N+
Sbjct: 4 QILVVDDDPVQRRLLKNALERHGHVVHTAENGLGGLAF------------LKHGGDQINV 51
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++ D MPG+ G LK +E+ + E PV+V + + E + GA F++KP+ P
Sbjct: 52 IVLDLMMPGLDGLGFLKATREAGI--ETPVIVQTGHGGIETVVEAMRAGAFDFVVKPVSP 109
Query: 142 SDV 144
+
Sbjct: 110 ERI 112
>gi|420239417|ref|ZP_14743743.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF080]
gi|398080800|gb|EJL71596.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF080]
Length = 282
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AENG +ALE L + L
Sbjct: 143 HVLIVDDSPTARALLSSRLKRYNFRVSVAENGAKALEIL-------------KKNPDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
V+TDY MP + G+EL ++I+ E+ ++ VSS + L+ G FML+P
Sbjct: 190 VVTDYNMPDIDGFELTRRIRSVRGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|386827265|ref|ZP_10114372.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386428149|gb|EIJ41977.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 127
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD IV R +E LL++ ++ AE+G + L+ + L+
Sbjct: 9 LLIVDDEIVSRSSLEALLESDEYQLFFAEDGAQGLD--------------KAESIHPVLM 54
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D MPGM G+E+ ++++ ++ + ++PV+++++ + PT CL+ GA + KP +
Sbjct: 55 ILDVMMPGMNGFEVCRRLRANAKLAQIPVIMITAWDDPTAKQRCLDVGANDVICKPFNRA 114
Query: 143 DVKKLTGHLI 152
D++ LI
Sbjct: 115 DLQARIQKLI 124
>gi|325294249|ref|YP_004280763.1| response regulator receiver protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064697|gb|ADY72704.1| response regulator receiver protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 133
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
++L VDD RKI++ LL K V AE+G +ALE L N K
Sbjct: 9 NILTVDDMAAMRKILKTLLAQLGYKNVDEAEDGKQALEIL------------KKNPNKYG 56
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVITD+ MP MTG EL+++I++ +K +P+++V++E + ++ G +++KP
Sbjct: 57 LVITDWNMPNMTGIELVQEIRKDPELKNIPILMVTAEAKKENVLMAIKAGVNNYIVKPFT 116
Query: 141 PSDVK 145
+K
Sbjct: 117 AETLK 121
>gi|148266181|ref|YP_001232887.1| CheA signal transduction histidine kinase [Geobacter uraniireducens
Rf4]
gi|146399681|gb|ABQ28314.1| CheA signal transduction histidine kinase [Geobacter uraniireducens
Rf4]
Length = 686
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDDSI R + ++L +V A +G ALE + GT+ +L
Sbjct: 568 HILVVDDSITTRTMERSILVTHGYEVEIAISGEDALEKVA--------------GTRFDL 613
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D MPG++G+EL ++++ ++VPV++VSS + +E GAQ +++K
Sbjct: 614 VISDVMMPGISGFELTRRLRTMEDYRDVPVIIVSSLARDEDKRQAMESGAQAYIVK 669
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P VL + R ++ LL+ V A +G++A E L ++ + N +
Sbjct: 38 PVRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEIL-------KEKSFN-----I 85
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+LV+T+ +P M+G+ LL I E K +PV+++SS + + + +C+ +GA F++KP+
Sbjct: 86 DLVLTEVELPAMSGFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPI 145
Query: 140 KPSDVKKLTGHLI 152
+ ++++ L H+
Sbjct: 146 RKNELRNLWQHVW 158
>gi|254241493|ref|ZP_04934815.1| hypothetical protein PA2G_02189 [Pseudomonas aeruginosa 2192]
gi|126194871|gb|EAZ58934.1| hypothetical protein PA2G_02189 [Pseudomonas aeruginosa 2192]
Length = 786
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E++ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EER--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|357009921|ref|ZP_09074920.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 998
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 14/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++LAVDD V+ ++ +L + ++TTA + A E L L+D Q+ +L
Sbjct: 668 NILAVDDDPVNLNVLVGILSSEPYRITTAHS---AREVLELLDTQQW-----------DL 713
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+I D MP M+GYEL +K++E + E+PV+++++ + P I + GA ++ KP+
Sbjct: 714 LIADVMMPQMSGYELTQKVREQYSLSELPVLLLTARSQPADIYTGFKSGANDYVTKPV 771
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 75/131 (57%), Gaps = 12/131 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+I+ LL+ + KV +G+ A E L +E+ N +++L+
Sbjct: 28 VLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETL-----KEKSN-------EIDLI 75
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++G+ LL + E K +PV+++SSE+ T + +C+ +GA +++KP++ +
Sbjct: 76 LTELDLPAISGFALLALVMEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKN 135
Query: 143 DVKKLTGHLIN 153
++K L H+
Sbjct: 136 ELKNLWQHVWR 146
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|229529485|ref|ZP_04418875.1| signal transduction histidine kinase [Vibrio cholerae 12129(1)]
gi|229333259|gb|EEN98745.1| signal transduction histidine kinase [Vibrio cholerae 12129(1)]
Length = 572
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQKIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 72/130 (55%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+I+ LL+ + KV +G++A E L ++L+
Sbjct: 48 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWEML------------KGKPHNIDLI 93
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL I E + K +PV+++SS++ + + +C+ GA +++KP++ +
Sbjct: 94 LTEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKN 153
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 154 ELRNLWQHVW 163
>gi|281411689|ref|YP_003345768.1| response regulator receiver protein [Thermotoga naphthophila
RKU-10]
gi|281372792|gb|ADA66354.1| response regulator receiver protein [Thermotoga naphthophila
RKU-10]
Length = 122
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS V RKIV LK +V AENG ALE L +L+
Sbjct: 5 ILLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKL--------------LEFAPDLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+ +LKK++E K +PV+V++++ + L GA+ M KP PS
Sbjct: 51 VLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGAKKVMRKPFSPS 110
Query: 143 DVKKLTGHLIN 153
+ HL+N
Sbjct: 111 QFIEEVKHLLN 121
>gi|428300057|ref|YP_007138363.1| response regulator receiver protein [Calothrix sp. PCC 6303]
gi|428236601|gb|AFZ02391.1| response regulator receiver protein [Calothrix sp. PCC 6303]
Length = 121
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ ALE + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHASDGLEALEVI--------------LSAPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|408788802|ref|ZP_11200516.1| two component response regulator [Rhizobium lupini HPC(L)]
gi|408485240|gb|EKJ93580.1| two component response regulator [Rhizobium lupini HPC(L)]
Length = 440
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD+ R + +L+ KV+ A +G RALE L + + LV
Sbjct: 136 VLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL-------------AQDPSIQLV 182
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITDY MP M GYEL ++I++S +++ V+ +SS L+ GA F+ +P P
Sbjct: 183 ITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYRPFVPE 242
Query: 143 DVK 145
+++
Sbjct: 243 ELQ 245
>gi|313107966|ref|ZP_07794135.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
39016]
gi|386066848|ref|YP_005982152.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
NCGM2.S1]
gi|310880637|gb|EFQ39231.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
39016]
gi|348035407|dbj|BAK90767.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
NCGM2.S1]
Length = 772
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 629 LEHTAIAPSSASDTAGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 688
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 689 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 734
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 735 DERERCRAAGMDDYLAKPFHRDELKAI 761
>gi|296388689|ref|ZP_06878164.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
PAb1]
gi|416874794|ref|ZP_11918365.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
152504]
gi|334842703|gb|EGM21305.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
152504]
Length = 772
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 629 LEHTAIAPSSASDTAGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 688
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 689 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 734
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 735 DERERCRAAGMDDYLAKPFHRDELKAI 761
>gi|126657208|ref|ZP_01728374.1| two-component system response regulator [Cyanothece sp. CCY0110]
gi|126621479|gb|EAZ92190.1| two-component system response regulator [Cyanothece sp. CCY0110]
Length = 149
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 51 ENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVP 110
NG L+FL +D Q N N +L+I D +PG+ G E+L +I E+ +++P
Sbjct: 40 RNGEEGLQFLQEIDSIIQDYNSNYP----SLIILDLNLPGIDGREILTRITENPQWRKIP 95
Query: 111 VVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
+V+ SS N P IN C E GA+ ++ KP+ +KK T H+I
Sbjct: 96 IVIFSSSNNPKDINFCYEHGAKSYIQKPMDIGLLKK-TIHII 136
>gi|88800741|ref|ZP_01116299.1| chemotaxis protein CheY [Reinekea blandensis MED297]
gi|88776517|gb|EAR07734.1| chemotaxis protein CheY [Reinekea sp. MED297]
Length = 121
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H L VDDS R++VE+ LK + +VT A++G AL+ S +
Sbjct: 4 HFLIVDDSASIRQMVEHTLKTAGYQVTAAKDGQEALDL--------------SQRQSFDC 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD MP M G L+K +++S+ K P++V+++E ++ GA +M+KP P
Sbjct: 50 VLTDQNMPRMDGLTLIKSLRQSANYKRTPILVLTTEASDDMKSKGRAAGATGWMVKPFDP 109
>gi|226875191|gb|ACO88943.1| cytokinin A-type response regulator 3 [Vitis vinifera]
Length = 33
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 115 SSENIPTRINECLEEGAQMFMLKPLKPSDVKKL 147
SSENIPTRIN+CLEEGAQMFMLKPLK SDVKKL
Sbjct: 1 SSENIPTRINKCLEEGAQMFMLKPLKQSDVKKL 33
>gi|373458372|ref|ZP_09550139.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
gi|371720036|gb|EHO41807.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
Length = 705
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++L V+DS+ R +E L K+TTA NG ALE + EQ K +L
Sbjct: 4 NILVVEDSLAQRFFIEKALAGDGFKITTAANGKLALE---KIHEQ-----------KPDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+++D MP M G EL K +K ++ +PVV++++ N P I + +E GA LK +P
Sbjct: 50 ILSDIMMPEMNGMELCKAVKSHPQLQTIPVVLMTTLNEPKEIIKIIECGADYLFLKEFEP 109
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL +D+ V++K++ ++LK + +V A NG A+E +LV
Sbjct: 580 VLVAEDNRVNQKLMISILKRAGFQVELARNGKEAVELF--------------RQKPFDLV 625
Query: 83 ITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+ D MP M GY ++++ E K P+ +++ + I L+ G M + KP
Sbjct: 626 LMDMQMPVMDGYTATREMRKLEEESGKHTPIFALTASDDAREIEGALKAGVDMVLRKP 683
>gi|229028788|ref|ZP_04184892.1| hypothetical protein bcere0028_8950 [Bacillus cereus AH1271]
gi|228732520|gb|EEL83398.1| hypothetical protein bcere0028_8950 [Bacillus cereus AH1271]
Length = 883
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ L+ L N T ++L+
Sbjct: 765 ILIVDDDHRNIFALQNALKKQHANIITAQNGIECLDIL-------------KNNTNIDLI 811
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 812 LMDIMMPNMDGYETMEHIRTNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 868
>gi|146295855|ref|YP_001179626.1| response regulator receiver protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409431|gb|ABP66435.1| response regulator receiver protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 123
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDDS V +KIV L +V A +G+ ALE L LN K++
Sbjct: 2 PKILVVDDSPVVKKIVTTTLVKKGFEVREALDGVAALEVL-----------LNE---KID 47
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVITD MP M G +L ++I+++ K +PV+++++ P+ + LE GA +++ KP+
Sbjct: 48 LVITDLNMPKMDGLQLTREIRKNPAYKRIPVIMLTTN--PSEEQKALEAGANLYLKKPVT 105
Query: 141 P----SDVKKLTG 149
S V+K G
Sbjct: 106 SEELISHVQKFLG 118
>gi|386058203|ref|YP_005974725.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
M18]
gi|392983453|ref|YP_006482040.1| sensor/response regulator hybrid [Pseudomonas aeruginosa DK2]
gi|451985023|ref|ZP_21933256.1| sensor histidine kinase/response regulator [Pseudomonas aeruginosa
18A]
gi|347304509|gb|AEO74623.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
M18]
gi|392318958|gb|AFM64338.1| sensor/response regulator hybrid [Pseudomonas aeruginosa DK2]
gi|451757353|emb|CCQ85779.1| sensor histidine kinase/response regulator [Pseudomonas aeruginosa
18A]
Length = 772
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 629 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 688
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 689 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 734
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 735 DERERCRAAGMDDYLAKPFHRDELKAI 761
>gi|323497541|ref|ZP_08102558.1| chemotaxis protein CheY [Vibrio sinaloensis DSM 21326]
gi|323317290|gb|EGA70284.1| chemotaxis protein CheY [Vibrio sinaloensis DSM 21326]
Length = 121
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS R++V L V A++G+ L L +G KV+L+
Sbjct: 5 ILVVDDSESLRQVVSIALSGEGYHVLQAKDGLDGLSML--------------DGRKVHLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G + +K++K K PV+++++EN + E + GA+ +M+KP KP
Sbjct: 51 ISDVNMPNMNGIDFVKQLKALPKYKFTPVIMLTTENQQYLMEESRKAGAKAWMVKPFKPD 110
Query: 143 DV 144
++
Sbjct: 111 EM 112
>gi|428301476|ref|YP_007139782.1| response regulator receiver sensor signal transduction histidine
kinase [Calothrix sp. PCC 6303]
gi|428238020|gb|AFZ03810.1| response regulator receiver sensor signal transduction histidine
kinase [Calothrix sp. PCC 6303]
Length = 371
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 15/120 (12%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P +L VDDS + +++N+L+ VTTAENG ALE +K
Sbjct: 5 PDKILVVDDSPDNVYLIKNILEGEGYIVTTAENGFTALE--------------KITESKF 50
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+LV+ D MP M GYE+ I+E+ ++ +P++++++ + P + + L+ GA F+ KP+
Sbjct: 51 DLVLLDLMMPEMDGYEVTLHIRENKELQFMPILIITAHDTPN-VAQGLDLGADDFIRKPV 109
>gi|332664922|ref|YP_004447710.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332333736|gb|AEE50837.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1603
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 73/133 (54%), Gaps = 14/133 (10%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P H+L VDD ++++++++ L +T+A NG AL+ L SNG
Sbjct: 1190 PVHILVVDDEPINQQVLKSHLSALKYDITSALNGEDALKAL-------------SNGKHF 1236
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+LV+ D MP M+GYE+ ++I++ + E+PV++++++N + L GA ++ KP
Sbjct: 1237 DLVLLDVMMPRMSGYEVCEQIRKKFLPSELPVIMITAKNQVQDLVHGLNTGANDYITKPF 1296
Query: 140 KPSD-VKKLTGHL 151
+ + ++ HL
Sbjct: 1297 TKDEFLARVKTHL 1309
>gi|428309074|ref|YP_007120051.1| serine phosphatase RsbU, regulator of sigma subunit [Microcoleus
sp. PCC 7113]
gi|428250686|gb|AFZ16645.1| serine phosphatase RsbU, regulator of sigma subunit [Microcoleus
sp. PCC 7113]
Length = 974
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++L VDD V+R++ N L + A NG+ AL L G K +L
Sbjct: 600 NILIVDDEPVNRQVFANYLALHNYGINQASNGLEALALL-------------ERGLKPDL 646
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ D MP +TGYE+ +KI+E+ E+PV+++S++N + + LE GA ++ KP+
Sbjct: 647 VLLDVMMPRLTGYEVTRKIRETWQANELPVLLLSAKNQVSDLVVGLEVGANDYLTKPISK 706
Query: 142 SD-VKKLTGHL 151
+ + ++ HL
Sbjct: 707 DELLARIKTHL 717
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 15/135 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P +LAVDD + K++ENLL+ +VTT + ALE L +E +N
Sbjct: 18 PVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML-----RENRN------- 65
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
K +LVI+D MP M G++LL+ + + ++PV+++SS + + + GA ++LK
Sbjct: 66 KYDLVISDVNMPDMDGFKLLELV---GLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLK 122
Query: 138 PLKPSDVKKLTGHLI 152
P++ ++K + H+I
Sbjct: 123 PVRMEELKNIWQHVI 137
>gi|107102374|ref|ZP_01366292.1| hypothetical protein PaerPA_01003436 [Pseudomonas aeruginosa PACS2]
gi|416855033|ref|ZP_11911278.1| sensor/response regulator hybrid [Pseudomonas aeruginosa 138244]
gi|334843316|gb|EGM21907.1| sensor/response regulator hybrid [Pseudomonas aeruginosa 138244]
Length = 772
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 629 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 688
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 689 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 734
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 735 DERERCRAAGMDDYLAKPFHRDELKAI 761
>gi|424909943|ref|ZP_18333320.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845974|gb|EJA98496.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 440
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD+ R + +L+ KV+ A +G RALE L + + LV
Sbjct: 136 VLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL-------------AQDPSIQLV 182
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITDY MP M GYEL ++I++S +++ V+ +SS L+ GA F+ +P P
Sbjct: 183 ITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYRPFVPE 242
Query: 143 DVK 145
+++
Sbjct: 243 ELQ 245
>gi|308273196|emb|CBX29799.1| Chemotaxis protein cheY [uncultured Desulfobacterium sp.]
Length = 144
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTT---AENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+VL VDDS R +++ ++K S V AE+G+ AL+ L +
Sbjct: 6 NVLIVDDSSSMRAVIKKIIKVSGFNVGNYFEAEDGIEALKIL--------------DNDW 51
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
++LV++D MP M G L ++K++ + +PVV++++E T+I E ++ GA ++ KP
Sbjct: 52 IDLVLSDINMPNMDGMSFLSEMKKNELFSSIPVVMITTEGSETKILESIKLGASGYIKKP 111
Query: 139 LKPSDVKKLTGHLI 152
P+D+K L+
Sbjct: 112 FFPADIKNTLSKLM 125
>gi|254411332|ref|ZP_05025109.1| hypothetical protein MC7420_1823 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181833|gb|EDX76820.1| hypothetical protein MC7420_1823 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 121
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK S V+ A +G+ ALE + L S + ++V
Sbjct: 4 VLVVEDSLAQRQMISDLLKGSGLTVSVASDGVEALEHI-----------LQS---RPDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKADPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|153801730|ref|ZP_01956316.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-3]
gi|124122754|gb|EAY41497.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-3]
Length = 514
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 383 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 435
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 436 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 487
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 488 DAGMNDIVLKPIRSKDIMEVVKRFLN 513
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS +++V LL++ +V AENG +A +L Q+ Q+N ++LV
Sbjct: 39 LVETDDST--QQVVTALLRHCMYQVIPAENGHQAWAYL-----QDMQSN-------IDLV 84
Query: 83 ITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G ++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 85 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 144
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 145 NELKNLWAHVW 155
>gi|15598020|ref|NP_251514.1| sensor/response regulator hybrid [Pseudomonas aeruginosa PAO1]
gi|418588180|ref|ZP_13152195.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P1]
gi|418590043|ref|ZP_13153959.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P2]
gi|421517351|ref|ZP_15964025.1| sensor/response regulator hybrid [Pseudomonas aeruginosa PAO579]
gi|9948909|gb|AAG06212.1|AE004709_5 probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PAO1]
gi|375041080|gb|EHS33799.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P1]
gi|375051137|gb|EHS43609.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P2]
gi|404346833|gb|EJZ73182.1| sensor/response regulator hybrid [Pseudomonas aeruginosa PAO579]
Length = 786
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|261410004|ref|YP_003246245.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261286467|gb|ACX68438.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1045
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 14/125 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L +DD V+ +++E +L +VT A +G AL L D +E +
Sbjct: 720 PTLLIIDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL---DAKEW-----------D 765
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVI+D MP M+GYEL ++I+E + E+PV+++++ + P I GA ++ KP++
Sbjct: 766 LVISDIMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 825
Query: 141 PSDVK 145
+++
Sbjct: 826 ALEIR 830
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|159080916|gb|ABW87920.1| CheY [Campylobacter rectus]
gi|159080918|gb|ABW87921.1| CheY [Campylobacter rectus]
Length = 121
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L+ + + AE+G+ A + LG + +N+
Sbjct: 3 ILVVDDSSTMRRIIKNTLQRLGHQEILEAEHGVEAWQILG-------------QHSDINV 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ ++P+++V++E + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEQKYVDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>gi|453044439|gb|EME92163.1| sensor/response regulator hybrid [Pseudomonas aeruginosa
PA21_ST175]
Length = 786
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|419752889|ref|ZP_14279293.1| sensor/response regulator hybrid [Pseudomonas aeruginosa
PADK2_CF510]
gi|420139355|ref|ZP_14647206.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CIG1]
gi|421153734|ref|ZP_15613274.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
14886]
gi|421159869|ref|ZP_15618977.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
25324]
gi|384400011|gb|EIE46370.1| sensor/response regulator hybrid [Pseudomonas aeruginosa
PADK2_CF510]
gi|403247895|gb|EJY61500.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CIG1]
gi|404523366|gb|EKA33795.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
14886]
gi|404546080|gb|EKA55142.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
25324]
Length = 786
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|418065098|ref|ZP_12702473.1| CheA signal transduction histidine kinase [Geobacter
metallireducens RCH3]
gi|373562730|gb|EHP88937.1| CheA signal transduction histidine kinase [Geobacter
metallireducens RCH3]
Length = 755
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 14/118 (11%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P +L V+DSI R +++N+L+ + +V TA +G+ AL LG D
Sbjct: 636 PRSILVVEDSITARTLLKNILEAAGYRVKTAVDGVDALTLLGTED--------------F 681
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+LV++D MP M G+EL +I+ES + E+PVV+V+S + ++ GA +++K
Sbjct: 682 DLVVSDVDMPRMNGFELTGRIRESRQLAELPVVLVTSLDSREDRERGVDAGANAYIVK 739
>gi|424942168|ref|ZP_18357931.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
NCMG1179]
gi|346058614|dbj|GAA18497.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
NCMG1179]
Length = 772
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 629 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 688
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 689 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 734
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 735 DERERCRAAGMDDYLAKPFHRDELKAI 761
>gi|355641557|ref|ZP_09052334.1| hypothetical protein HMPREF1030_01420 [Pseudomonas sp. 2_1_26]
gi|421167033|ref|ZP_15625250.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
700888]
gi|354830722|gb|EHF14758.1| hypothetical protein HMPREF1030_01420 [Pseudomonas sp. 2_1_26]
gi|404536102|gb|EKA45752.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
700888]
Length = 786
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTAGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|255323420|ref|ZP_05364551.1| Chemotaxis protein CheY homolog [Campylobacter showae RM3277]
gi|255299457|gb|EET78743.1| Chemotaxis protein CheY homolog [Campylobacter showae RM3277]
Length = 121
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L+ + + AE+G A + LG + +N+
Sbjct: 3 ILVVDDSSTMRRIIKNTLQRLGHQEILEAEHGAEAWQILG-------------QHSDINV 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ + ++P+++V++E + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEAKYVDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|423758172|ref|ZP_17712372.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein, partial [Vibrio cholerae HC-50A2]
gi|408637584|gb|EKL09623.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein, partial [Vibrio cholerae HC-50A2]
Length = 152
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 21 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 73
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 74 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 125
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 126 DAGMNDIVLKPIRSKDIMEVVKRFLN 151
>gi|339444145|ref|YP_004710149.1| hypothetical protein EGYY_05350 [Eggerthella sp. YY7918]
gi|338903897|dbj|BAK43748.1| hypothetical protein EGYY_05350 [Eggerthella sp. YY7918]
Length = 708
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 17/130 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS +DR ++ N+ K+ + A +G AL+ L + TKV++V
Sbjct: 9 MLIVDDSKIDRTLLANIFKDQYA-IKQACDGREALDVL--------------HQTKVDIV 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D M GM G+ +++ ++ + ++P+VV +SE P L +GA F+ KP P
Sbjct: 54 VLDISMTGMDGFAVIEAMRADPALSDIPIVVATSE--PAHEEAALTDGADDFIAKPFNPV 111
Query: 143 DVKKLTGHLI 152
VKK ++I
Sbjct: 112 VVKKRVENII 121
>gi|241764781|ref|ZP_04762789.1| CheA signal transduction histidine kinase [Acidovorax delafieldii
2AN]
gi|241365711|gb|EER60407.1| CheA signal transduction histidine kinase [Acidovorax delafieldii
2AN]
Length = 2042
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 2 DACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
+ G ++S S + P VL VDDSI R++ + LL+ +V A +G++ALE L
Sbjct: 1898 EGAGAGKPAASLLSGPSQVPLVLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERL- 1956
Query: 62 LVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPT 121
QE+ + +V++D MP M G++L + I+ ++++P+++++S
Sbjct: 1957 ----QEE---------RPTVVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIAEK 2003
Query: 122 RINECLEEGAQMFMLKPLKPSDVKKLTGH 150
+E G ++ KP ++ L H
Sbjct: 2004 HREHAMELGVNHYLGKPYSDEELLSLIQH 2032
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|345563303|gb|EGX46306.1| hypothetical protein AOL_s00110g130 [Arthrobotrys oligospora ATCC
24927]
Length = 685
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
PP VL +DD V R + L+ + CKV TA NG + LE L +E + + L
Sbjct: 534 PPRVLVIDDDEVVRLVFVRHLEGAGCKVKTANNGQKGLEVL---EEMAKSDCLP------ 584
Query: 80 NLVITDYCMPGMTGYELLKKIKE--SSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+LV+TD MP M GY+ K++ S+ ++ +PVV +S+ C++ G F+ K
Sbjct: 585 HLVLTDCRMPVMDGYKFTTKVRTHPSADIRNLPVVAMSAATTDEERAHCIKVGMSRFLSK 644
Query: 138 PLK 140
P K
Sbjct: 645 PAK 647
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|218890978|ref|YP_002439844.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
LESB58]
gi|218771203|emb|CAW26968.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
LESB58]
Length = 786
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
++ +A SS+S ++ + VL V+D+ V++ + + LL C+V AE+G+ AL+ L
Sbjct: 643 LEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALKML 702
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
E+ ++LV+ D MP M GYE ++I++S +P++ +++ +P
Sbjct: 703 ------EEH--------PIDLVLMDCNMPVMDGYEAARQIRDSGRWGGLPIIALTANALP 748
Query: 121 TRINECLEEGAQMFMLKPLKPSDVKKL 147
C G ++ KP ++K +
Sbjct: 749 DERERCRAAGMDDYLAKPFHRDELKAI 775
>gi|443313825|ref|ZP_21043435.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
gi|442776238|gb|ELR86521.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
Length = 139
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S V A +GM ALE + ++V
Sbjct: 22 VLVVEDSITQREMITDLLKGSGLVVAIATDGMEALE--------------QIQSFRPDIV 67
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA +++KP +P
Sbjct: 68 VLDIVMPRMNGYEVCRRLKTDPKTQGVPVVMCSSKGEEFDRYWGMKQGADAYIVKPFQPK 127
Query: 143 DV 144
++
Sbjct: 128 EL 129
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|46580004|ref|YP_010812.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120602585|ref|YP_966985.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387153554|ref|YP_005702490.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46449420|gb|AAS96071.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120562814|gb|ABM28558.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311233998|gb|ADP86852.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 120
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+++VDDS R++V L+N+ +V A +G ++ L V +V
Sbjct: 5 IMSVDDSASIRQMVGFTLRNAGYEVIEASDG---------------KDALGKLSGPVKMV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITD MP M G EL+++I+ + K +PVV++++E+ R E GA +++KP KP
Sbjct: 50 ITDLNMPNMDGIELIRRIRATPAYKFIPVVMLTTESQAARKQEGKAAGATGWIVKPFKPE 109
Query: 143 D----VKKLTG 149
V+KL G
Sbjct: 110 QLLAVVQKLLG 120
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|419760077|ref|ZP_14286362.1| chemotaxis protein CheA [Thermosipho africanus H17ap60334]
gi|407515116|gb|EKF49902.1| chemotaxis protein CheA [Thermosipho africanus H17ap60334]
Length = 587
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 23/137 (16%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
+S N + +L +DDSIV R +V L+N +V TA++G +E +QE
Sbjct: 465 ASKNEEKKKILLIDDSIVTRNVVSKFLENRGYQVVTAKDGYDGIEKFK---KQE------ 515
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS---ENIPTRINECLEEG 130
+LVI+D MPG+ G+E KKIKE + VPV++ S+ EN ++ +E G
Sbjct: 516 -----FDLVISDVEMPGIDGFETTKKIKE--INDNVPVIIFSTLSQEN----FDKAIESG 564
Query: 131 AQMFMLKPLKPSDVKKL 147
A F+ K P ++ +L
Sbjct: 565 ADSFISKDEPPENLLRL 581
>gi|283785622|ref|YP_003365487.1| chemotaxis protein CheY [Citrobacter rodentium ICC168]
gi|282949076|emb|CBG88682.1| chemotaxis protein CheY [Citrobacter rodentium ICC168]
Length = 129
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ SVM +PV++V++E I + GA +++K
Sbjct: 51 -FGFVISDWNMPNMDGLELLKTIRADSVMASMPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>gi|226226746|ref|YP_002760852.1| two-component hybrid sensor and regulator [Gemmatimonas aurantiaca
T-27]
gi|226089937|dbj|BAH38382.1| two-component hybrid sensor and regulator [Gemmatimonas aurantiaca
T-27]
Length = 862
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+LAV+DS +I+ +LL+++ +V A NG ALE L S + ++
Sbjct: 4 HILAVEDSPTQAEILRHLLESAGHEVAVASNGTAALELLA------------STRRRFDV 51
Query: 82 VITDYCMPG-MTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V++D MPG + GYEL ++IK S + PVV+++S P I + LE GA F KP
Sbjct: 52 VVSDIVMPGAVDGYELCRRIKASPHYR-TPVVLLTSLADPMDIIKGLECGADNFFTKP 108
>gi|414341506|ref|YP_006983027.1| chemotaxis protein CheY [Gluconobacter oxydans H24]
gi|411026841|gb|AFW00096.1| chemotaxis protein CheY [Gluconobacter oxydans H24]
gi|453329158|dbj|GAC88635.1| chemotaxis protein CheY [Gluconobacter thailandicus NBRC 3255]
Length = 119
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++L VDDS R +++N L+ + V AE+GM ALE L D ++
Sbjct: 2 NILIVDDSRTIRNLLKNTLEGAGYTVCQAEDGMDALEKLSEFDP--------------SI 47
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITD MP M G+EL++K+++ + K +P++ +++E P + E GA +++KP
Sbjct: 48 IITDLNMPRMNGFELVQKLRQQAKTKFIPILFLTTEGSPEVREKGREAGATGWLVKPF 105
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|217077518|ref|YP_002335236.1| chemotaxis protein CheA [Thermosipho africanus TCF52B]
gi|217037373|gb|ACJ75895.1| CheA signal transduction histidine kinase, putative [Thermosipho
africanus TCF52B]
Length = 587
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 23/137 (16%)
Query: 14 SSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLN 73
+S N + +L +DDSIV R +V L+N +V TA++G +E +QE
Sbjct: 465 ASKNEEKKKILLIDDSIVTRNVVSKFLENRGYQVVTAKDGYDGIEKFK---KQE------ 515
Query: 74 SNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS---ENIPTRINECLEEG 130
+LVI+D MPG+ G+E KKIKE + VPV++ S+ EN ++ +E G
Sbjct: 516 -----FDLVISDVEMPGIDGFETTKKIKE--INDNVPVIIFSTLSQEN----FDKAIESG 564
Query: 131 AQMFMLKPLKPSDVKKL 147
A F+ K P ++ +L
Sbjct: 565 ADSFISKDEPPENLLRL 581
>gi|119509005|ref|ZP_01628156.1| Response regulator receiver domain protein (CheY) [Nodularia
spumigena CCY9414]
gi|119466171|gb|EAW47057.1| Response regulator receiver domain protein (CheY) [Nodularia
spumigena CCY9414]
Length = 121
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ ALE + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLIVTHAHDGVEALEAI--------------QTAPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSNPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|298711257|emb|CBJ26502.1| Histidine kinase receptor [Ectocarpus siliculosus]
Length = 773
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 3 ACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGL 62
AC + ++ N P +L VDD +V+RK++ +LK+ T +NG++A++
Sbjct: 615 ACALDPITTLEPQENSTHPKILVVDDVLVNRKVLSRILKSVGVDADTCDNGLQAVQM--- 671
Query: 63 VDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTR 122
+ + +LV+ D MP M G + KI+ + KE PV+ VS+
Sbjct: 672 -----------CDAGRYSLVLMDMVMPVMNGVDACAKIRSGTRNKETPVIFVSANVQSDV 720
Query: 123 INECLEEGAQMFMLKPLKPSDVKKL 147
I+ C E G F+ KP+ + + ++
Sbjct: 721 ISRCSEMGGSGFVTKPVTKAKIVEI 745
>gi|229016308|ref|ZP_04173254.1| hypothetical protein bcere0030_8850 [Bacillus cereus AH1273]
gi|229022547|ref|ZP_04179077.1| hypothetical protein bcere0029_8980 [Bacillus cereus AH1272]
gi|228738742|gb|EEL89208.1| hypothetical protein bcere0029_8980 [Bacillus cereus AH1272]
gi|228744955|gb|EEL95011.1| hypothetical protein bcere0030_8850 [Bacillus cereus AH1273]
Length = 896
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N L+ + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALEKQHANIITAQNGIECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + EVP++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEVPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|186686047|ref|YP_001869243.1| CheA signal transduction histidine kinase [Nostoc punctiforme PCC
73102]
gi|186468499|gb|ACC84300.1| CheA signal transduction histidine kinase [Nostoc punctiforme PCC
73102]
Length = 1201
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 22/156 (14%)
Query: 7 ASSSSSSSSSNP----KPPH-----VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
AS+S + + P KP H VL VDD+I R+ + L+ S +V A+NG+ AL
Sbjct: 1044 ASTSIKTIETQPSYSQKPDHKSPKVVLVVDDAISLRQTISLTLQKSGYQVIQAQNGVEAL 1103
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSE 117
E L L E + +V++D MP M G+ELL ++ + ++PVV+++S
Sbjct: 1104 EKLQLHPE-------------IQVVVSDLEMPRMNGFELLGNFRQYPKLAKIPVVILTSR 1150
Query: 118 NIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ E GA+ ++ KP ++ LIN
Sbjct: 1151 SSEKHRQLAQELGAKAYLTKPYLENEFLSTIKRLIN 1186
>gi|186685999|ref|YP_001869195.1| response regulator receiver, CheY [Nostoc punctiforme PCC 73102]
gi|186468451|gb|ACC84252.1| response regulator receiver, CheY [Nostoc punctiforme PCC 73102]
Length = 121
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK + VT A +G+ ALE + + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKATGLTVTHASDGLEALEAIQVAPP--------------DLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|427717458|ref|YP_007065452.1| response regulator receiver protein [Calothrix sp. PCC 7507]
gi|427349894|gb|AFY32618.1| response regulator receiver protein [Calothrix sp. PCC 7507]
Length = 121
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ ALE + + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHASDGVEALEAIQI--------------EPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|421351208|ref|ZP_15801573.1| his Kinase A domain protein [Vibrio cholerae HE-25]
gi|395951653|gb|EJH62267.1| his Kinase A domain protein [Vibrio cholerae HE-25]
Length = 570
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQQVVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 ------DRNHAFDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|410631219|ref|ZP_11341897.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola arctica BSs20135]
gi|410149206|dbj|GAC18764.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola arctica BSs20135]
Length = 123
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+I++NLLK+ + A++G AL L QQ + +
Sbjct: 3 ILVVDDFSTMRRIIKNLLKDLGFANIQEADDGSTALPML-------QQGDFD-------F 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LL+ I+ + +K +PV++V++E +I + G +++KP
Sbjct: 49 VVTDWNMPGMQGIDLLRAIRADANLKHIPVLMVTAEAKKEQIVAAAQAGVNGYVIKPFTA 108
Query: 142 SDVKK 146
+ +K+
Sbjct: 109 ATLKE 113
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|443302653|gb|AGC82268.1| cAMP phosphodiesterase [Dictyostelium lacteum]
Length = 698
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P H+L DD ++ RKI+EN+LK V E LE
Sbjct: 85 PSRVHILVADDDVIQRKILENVLKKFHYNVHNGEEAWECLE---------------KGQV 129
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTR-INECLEEGAQMFML 136
K +LV+TD MP + G++L KI V ++PV+++S + + N+ ++ G Q F+
Sbjct: 130 KYDLVLTDVMMPEINGFDLCTKINLHPVFNKIPVILMSGTAVDYKCANDTIKIGGQDFLT 189
Query: 137 KPLKPSDVKK 146
KP+ +KK
Sbjct: 190 KPIAKELLKK 199
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|423404369|ref|ZP_17381542.1| hypothetical protein ICW_04767 [Bacillus cereus BAG2X1-2]
gi|423475001|ref|ZP_17451716.1| hypothetical protein IEO_00459 [Bacillus cereus BAG6X1-1]
gi|401646879|gb|EJS64493.1| hypothetical protein ICW_04767 [Bacillus cereus BAG2X1-2]
gi|402437714|gb|EJV69736.1| hypothetical protein IEO_00459 [Bacillus cereus BAG6X1-1]
Length = 896
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N L+ + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALEKQHANIITAQNGIECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + EVP++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEVPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R IV LL+N + +V A NG++A + L E NN +++V
Sbjct: 87 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL------EDLNN------HIDIV 134
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 135 LTEVIMPYLSGISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 194
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 195 ELKILWQHVW 204
>gi|291278597|ref|YP_003495432.1| hypothetical protein DEFDS_0164 [Deferribacter desulfuricans SSM1]
gi|290753299|dbj|BAI79676.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 775
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDSI RK ++++L + KV A++G++ALE L L +V +
Sbjct: 654 VLIVDDSISVRKYLKDILTKNGYKVLEAKDGLQALETLEL--------------NRVPYI 699
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
ITD MP + GYEL+ KI+ + K V + V++S ++ LE GA F++KP
Sbjct: 700 ITDLEMPNLNGYELIDKIRNNIQDKSVKIYVITSRGTEKHRSKALELGADGFIVKPF 756
>gi|281209484|gb|EFA83652.1| histidine kinase [Polysphondylium pallidum PN500]
Length = 1067
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 25/148 (16%)
Query: 11 SSSSSSNPKPPH------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
S S SNP PH VL VDD++V+R++ +L++ C V +GM AL+ + V
Sbjct: 919 SESIVSNPDSPHDKLEMRVLVVDDNMVNRQVAYKMLQSMGCNVDVVSSGMEALDRIEKV- 977
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKE-----SSVMKEVPVVVVSSENI 119
+++ D MPGM G+++ K+I+E S+ K +P++ +++
Sbjct: 978 -------------TYDMIFLDIMMPGMDGFQVTKEIRERELKRSNGTKHIPIIAMTANAF 1024
Query: 120 PTRINECLEEGAQMFMLKPLKPSDVKKL 147
+C+ G ++ KP+K ++ + L
Sbjct: 1025 KEDEVKCINSGMDDYLSKPIKITEFRLL 1052
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|124009210|ref|ZP_01693891.1| signal transduction histidine kinase [Microscilla marina ATCC
23134]
gi|123985195|gb|EAY25129.1| signal transduction histidine kinase [Microscilla marina ATCC
23134]
Length = 652
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL +D+I+ +++ + +L CKV A+NG +E L + + ++V
Sbjct: 387 VLVCEDNILSQELTKEILHRLGCKVDIADNGKVGVE------------KLQNKAAQYDVV 434
Query: 83 ITDYCMPGMTGYELLKKIKE-SSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ D MP M G E I+E SV+K++PV+ ++++N+ ++ E G ++ KP P
Sbjct: 435 LMDIQMPKMNGIEATYAIRELDSVVKDIPVIALTAQNVTDEKDKYFEAGMTDYLTKPFTP 494
Query: 142 SDV-KKLTGHL 151
+D+ +K+ HL
Sbjct: 495 ADITRKVLKHL 505
>gi|329922247|ref|ZP_08277949.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328942284|gb|EGG38554.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1049
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
+ S + + + P +L VDD V+ K++ +LL + ++ RA E L L+++ E
Sbjct: 706 AESEALALARPSDGRLLIVDDDPVNLKVIHHLLADEGYRIVAV---TRAEEALQLLEQGE 762
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+L+I+D MP M+GYEL + I++ ++ E+P++++++ N P I+
Sbjct: 763 W-----------DLIISDVMMPQMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGF 811
Query: 128 EEGAQMFMLKPLKPSDVK 145
GA +++KP+ ++K
Sbjct: 812 ISGANDYLIKPVDHLELK 829
>gi|262118598|pdb|3GL9|A Chain A, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
gi|262118599|pdb|3GL9|B Chain B, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
gi|262118600|pdb|3GL9|C Chain C, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
gi|262118601|pdb|3GL9|D Chain D, The Structure Of A Histidine Kinase-Response Regulator
Complex Sheds Light Into Two-Component Signaling And
Reveals A Novel Cis Autophosphorylation Mechanism
Length = 122
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS V RKIV LK +V AENG ALE L S T +L+
Sbjct: 5 VLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKL-------------SEFTP-DLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ MP M G+ +LKK++E K +PV+V++++ + L GA+ M KP PS
Sbjct: 51 VLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPS 110
Query: 143 DVKKLTGHLIN 153
+ HL+N
Sbjct: 111 QFIEEVKHLLN 121
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
H+L VDD IV +L+ +V T ++ M AL+ L + +L
Sbjct: 10 HILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALD------------TLRARKGYFDL 57
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKE--VPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
V+TD MP M G +L KK VM+E +PV+++S++ P+ I + LEEG +M+KP+
Sbjct: 58 VVTDLHMPQMNGLQLQKK-----VMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPI 112
Query: 140 KPSDVKKLTGHLI 152
DVK + + I
Sbjct: 113 SLDDVKHVWQYAI 125
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|153869318|ref|ZP_01998958.1| response regulator receiver [Beggiatoa sp. PS]
gi|152074148|gb|EDN71034.1| response regulator receiver [Beggiatoa sp. PS]
Length = 137
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +DD I+ R +E LL+++ C + AENG + +E + +L+
Sbjct: 7 ILVIDDEIISRYTIEALLESNDCTLVFAENGKQGIE--------------KAETMTPDLI 52
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G+++ + ++ K+VP+V+V+ + P + CL GA + KP
Sbjct: 53 LLDVMMPDMNGFQVCRLLRADLRFKDVPIVMVTGWDDPIARSRCLSIGATDIICKPFNRK 112
Query: 143 DVKKLTGHLI 152
D++ + L+
Sbjct: 113 DLRAIISKLL 122
>gi|153829718|ref|ZP_01982385.1| sensor histidine kinase/response regulator [Vibrio cholerae 623-39]
gi|148874797|gb|EDL72932.1| sensor histidine kinase/response regulator [Vibrio cholerae 623-39]
Length = 572
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 ------DRNRAFDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|332527143|ref|ZP_08403220.1| response regulator receiver protein [Rubrivivax benzoatilyticus
JA2]
gi|332111571|gb|EGJ11553.1| response regulator receiver protein [Rubrivivax benzoatilyticus
JA2]
Length = 131
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSN 75
NP L VDD R+IV LLK C AE+G+ AL L
Sbjct: 2 NPSDLKFLIVDDFSTMRRIVRGLLKEMGCNNADEAEDGVVALNML--------------R 47
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+K + V++D MP M G+ELLK IK +K +PV++V++E I + GA ++
Sbjct: 48 ASKYDFVVSDINMPNMNGFELLKAIKADGSLKHLPVLMVTAEARKEDIVLAAQSGAAGYI 107
Query: 136 LKPL 139
+KP
Sbjct: 108 VKPF 111
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|209524850|ref|ZP_03273396.1| response regulator receiver protein [Arthrospira maxima CS-328]
gi|376007689|ref|ZP_09784879.1| Response regulator receiver domain protein (CheY); chemotaxis
protein [Arthrospira sp. PCC 8005]
gi|409990918|ref|ZP_11274232.1| response regulator receiver protein [Arthrospira platensis str.
Paraca]
gi|209494729|gb|EDZ95038.1| response regulator receiver protein [Arthrospira maxima CS-328]
gi|291568065|dbj|BAI90337.1| two-component response regulator [Arthrospira platensis NIES-39]
gi|375323933|emb|CCE20632.1| Response regulator receiver domain protein (CheY); chemotaxis
protein [Arthrospira sp. PCC 8005]
gi|409938217|gb|EKN79567.1| response regulator receiver protein [Arthrospira platensis str.
Paraca]
Length = 121
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ V+DS+ R+++ NLL+ S KV A +G+ AL EQ QQ +LV
Sbjct: 4 IMVVEDSVTQREMISNLLRESGLKVAVASDGVEAL-------EQVQQ-------ISPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K +++ +V+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYELCRRLKSDPKTQKIAIVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|332526414|ref|ZP_08402536.1| chemotaxis signal transduction protein CheY [Rubrivivax
benzoatilyticus JA2]
gi|332110546|gb|EGJ10869.1| chemotaxis signal transduction protein CheY [Rubrivivax
benzoatilyticus JA2]
Length = 120
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDS R++V LKN+ V A +G A E +N NLV
Sbjct: 4 ILAVDDSASMRQMVSFTLKNAGFHVVEAVDGQDAYE--------------KANQRDFNLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP M G L KK++E+ K P++++++E+ GA +++KP P+
Sbjct: 50 LTDQNMPRMDGISLTKKLRENPKFKSTPILILTTESSDQMKQAGRAAGATGWLVKPFDPA 109
Query: 143 DVKKLTGHLIN 153
+ ++ G +I
Sbjct: 110 KLVEVIGKVIR 120
>gi|301061357|ref|ZP_07202137.1| PAS domain S-box protein [delta proteobacterium NaphS2]
gi|300444534|gb|EFK08519.1| PAS domain S-box protein [delta proteobacterium NaphS2]
Length = 492
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K HVL VDD V R +L ++TTAENG +ALE LG
Sbjct: 3 KKTHVLVVDDEKVVRDGCRRVLSGRGYEITTAENGSQALEILG--------------AEH 48
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++++ D MP M+G E+L++ +++ ++PV+V++ EC+++GA F+ KP
Sbjct: 49 IDILLLDLKMPVMSGEEVLERTRDTH--PDIPVIVITGHGTVDTAVECMKKGAYDFITKP 106
Query: 139 LK 140
+
Sbjct: 107 FQ 108
>gi|409438987|ref|ZP_11266050.1| Response regulator receiver protein [Rhizobium mesoamericanum
STM3625]
gi|408749647|emb|CCM77228.1| Response regulator receiver protein [Rhizobium mesoamericanum
STM3625]
Length = 268
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TA++G +ALE L + L
Sbjct: 135 HVLIVDDSPTARALLSSRLKRYNFRVSTADSGAKALEIL-------------KANRDIGL 181
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 182 MITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 239
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|419836290|ref|ZP_14359732.1| his Kinase A domain protein [Vibrio cholerae HC-46B1]
gi|421342782|ref|ZP_15793187.1| his Kinase A domain protein [Vibrio cholerae HC-43B1]
gi|421354197|ref|ZP_15804529.1| his Kinase A domain protein [Vibrio cholerae HE-45]
gi|422307289|ref|ZP_16394451.1| his Kinase A domain protein [Vibrio cholerae CP1035(8)]
gi|423735198|ref|ZP_17708401.1| his Kinase A domain protein [Vibrio cholerae HC-41B1]
gi|424009127|ref|ZP_17752069.1| his Kinase A domain protein [Vibrio cholerae HC-44C1]
gi|395943299|gb|EJH53974.1| his Kinase A domain protein [Vibrio cholerae HC-43B1]
gi|395953322|gb|EJH63935.1| his Kinase A domain protein [Vibrio cholerae HE-45]
gi|408621976|gb|EKK94966.1| his Kinase A domain protein [Vibrio cholerae CP1035(8)]
gi|408630234|gb|EKL02862.1| his Kinase A domain protein [Vibrio cholerae HC-41B1]
gi|408857768|gb|EKL97450.1| his Kinase A domain protein [Vibrio cholerae HC-46B1]
gi|408864638|gb|EKM04068.1| his Kinase A domain protein [Vibrio cholerae HC-44C1]
Length = 574
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|229521544|ref|ZP_04410963.1| signal transduction histidine kinase [Vibrio cholerae TM 11079-80]
gi|229341642|gb|EEO06645.1| signal transduction histidine kinase [Vibrio cholerae TM 11079-80]
Length = 576
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|449096086|ref|YP_007428577.1| two-component sensor histidine kinase [Bacillus subtilis XF-1]
gi|449030001|gb|AGE65240.1| two-component sensor histidine kinase [Bacillus subtilis XF-1]
Length = 1028
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S S+ S + P +L VDD+I KI+ ++L+ V A+NG ALE +
Sbjct: 675 SFSTPYYSESIDAPTILIVDDNIDSLKILNDMLEGVPYNVIAAKNGKEALEIISC----- 729
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
TK++LVI D MP MTG+E+ KI+E M ++PV+++++ I +
Sbjct: 730 ---------TKLDLVILDLMMPDMTGFEVCMKIRERFSMVDLPVLIITAAIIGHDKYKAF 780
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLI 152
GA + KP S+ +LI
Sbjct: 781 HAGANDILQKPYHYSEFMARIQNLI 805
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +VT NG++A + L E N +++V
Sbjct: 97 VLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKIL------EDLTN------HIDIV 144
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 145 LTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKN 204
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 205 ELKNLWQHVW 214
>gi|42523853|ref|NP_969233.1| chemotaxis resonse regulator CheY [Bdellovibrio bacteriovorus
HD100]
gi|39576060|emb|CAE80226.1| chemotaxis resonse regulator CheY [Bdellovibrio bacteriovorus
HD100]
Length = 134
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 12/123 (9%)
Query: 20 PP--HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
PP +L +DD R +V+N LK K + AE+G L+ L QNN + G
Sbjct: 3 PPETRILVIDDMPSIRDLVKNTLKAMGYKNLQEAEDGEAGLKIL-------IQNN--TPG 53
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
T++ LVI+D+ MP M G ELLK+++ ++ +P V+++SE+ ++ E + G +++
Sbjct: 54 TQIQLVISDWNMPKMKGLELLKQVRATAEFANLPFVLLTSESERDQVTEAVLAGVSQYIV 113
Query: 137 KPL 139
KP
Sbjct: 114 KPF 116
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R++V LL++ +V ENG +A +L Q+ Q+N ++LV
Sbjct: 47 LVETDDST--RQVVAALLRHCMYQVIPVENGHQAWAYL-----QDMQSN-------IDLV 92
Query: 83 ITDYCM-PGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+T+ M G++G +LL +I V K++PV+++SS + + CL GA F+ KP++
Sbjct: 93 LTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRK 152
Query: 142 SDVKKLTGHLI 152
+++K L H+
Sbjct: 153 NELKNLWAHVW 163
>gi|434407374|ref|YP_007150259.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
gi|428261629|gb|AFZ27579.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
Length = 121
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S V A +G+ ALE + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVIHAGDGVEALEAI--------------QSAAPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYEL +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYELCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|422910550|ref|ZP_16945185.1| his Kinase A domain protein [Vibrio cholerae HE-09]
gi|341633338|gb|EGS58159.1| his Kinase A domain protein [Vibrio cholerae HE-09]
Length = 570
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQQVVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ V ++P++ +++ + C+
Sbjct: 492 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHV--DIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|319789818|ref|YP_004151451.1| response regulator receiver protein [Thermovibrio ammonificans
HB-1]
gi|317114320|gb|ADU96810.1| response regulator receiver protein [Thermovibrio ammonificans
HB-1]
Length = 133
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 13/124 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD RKI++ LL K V AE+G +ALE L N K L
Sbjct: 10 ILIVDDMAAMRKILKTLLAQLGYKNVDEAEDGKQALEIL------------RQNPDKYGL 57
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
VITD+ MP MTG EL+++I++ +K +P+++V++E + ++ G +++KP
Sbjct: 58 VITDWNMPNMTGIELVQEIRKDEKLKHLPILMVTAEAKKENVLMAIKAGVNNYIVKPFTA 117
Query: 142 SDVK 145
+K
Sbjct: 118 ETLK 121
>gi|229154672|ref|ZP_04282787.1| hypothetical protein bcere0010_8670 [Bacillus cereus ATCC 4342]
gi|228628620|gb|EEK85332.1| hypothetical protein bcere0010_8670 [Bacillus cereus ATCC 4342]
Length = 883
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ L+ L N T ++L+
Sbjct: 765 ILIVDDDHRNIFALQNALKKHHANIITAQNGLECLDIL-------------KNNTNIDLI 811
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 812 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 868
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+IV LL+ +V +GM+A E + +LV
Sbjct: 55 VLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVM------------RERAYDFDLV 102
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G +LL +I ++ K +PV+++SS++ + +C+++GA F++KP++ +
Sbjct: 103 LTEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKN 162
Query: 143 DVKKLTGHL 151
++ L H+
Sbjct: 163 ELGNLWQHV 171
>gi|399035550|ref|ZP_10732965.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF122]
gi|398066681|gb|EJL58240.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF122]
Length = 276
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TA++G +ALE L + L
Sbjct: 143 HVLIVDDSPTARALLSSRLKRYNFRVSTADSGAKALEIL-------------KANRDIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ITDY MP + G+EL ++I+ S E+ ++ VSS + L+ G FML+P
Sbjct: 190 MITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 247
>gi|153870912|ref|ZP_02000210.1| two-component response regulator [Beggiatoa sp. PS]
gi|152072625|gb|EDN69793.1| two-component response regulator [Beggiatoa sp. PS]
Length = 194
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
+ P PP +L VDD + R +++NLLK +V A G++ALE E Q N+
Sbjct: 3 TKPPPPLILVVDDDVFMRGMLQNLLKGEGYRVIVAAEGIKALE--------EFQQNIP-- 52
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+LV+ D MP M G+ ++K+ V +VPV++++S + ++ GA ++
Sbjct: 53 ----DLVLMDAAMPIMDGFTACAELKKLKVGDDVPVIMITSLDDEQSVDNAFGVGAVEYI 108
Query: 136 LKPLK 140
KP++
Sbjct: 109 TKPIQ 113
>gi|153827167|ref|ZP_01979834.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-2]
gi|149738929|gb|EDM53251.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-2]
Length = 572
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
+LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 494 ------DRNHAFDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|415946936|ref|ZP_11556524.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
gi|407758148|gb|EKF68017.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
Length = 126
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 26 VDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVIT 84
VDD R+IV LLK K+ A++G AL+ L + + V+T
Sbjct: 2 VDDFSTMRRIVSGLLKELEYTKMAEADDGTSALKIL------------EAGAMPITFVLT 49
Query: 85 DYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDV 144
D+ MPGM G LLKKI+ + M +PV+++++E I E + GA +++KP + +
Sbjct: 50 DWNMPGMDGLTLLKKIRATPSMAHLPVLMITAEAKKENIVEAAQSGADGYIVKPFNAATL 109
Query: 145 K 145
K
Sbjct: 110 K 110
>gi|406891982|gb|EKD37456.1| PAS/PAC sensor hybrid histidine kinase [uncultured bacterium]
Length = 618
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 14/117 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++L V+DS + + +L+ +VT A NG +ALE L + N+
Sbjct: 11 NILLVEDSPTQAEQLRYILEKRNFRVTLAGNGKQALEIL--------------REFRPNV 56
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
VITD MP M GYEL + I+ +K++PV++V++ + PT + LE GA F+ KP
Sbjct: 57 VITDVVMPEMDGYELCRTIRSREKLKDIPVILVTTLSDPTDVIRGLEVGANNFITKP 113
>gi|158335119|ref|YP_001516291.1| response regulator receiver domain-containing protein
[Acaryochloris marina MBIC11017]
gi|158305360|gb|ABW26977.1| response regulator receiver domain protein, putative [Acaryochloris
marina MBIC11017]
Length = 595
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P P +L VDD +R ++ L+ +V A++G ALE + D
Sbjct: 180 PTTPTLLVVDDVEANRDMLSRRLQRKGYEVALADSGEAALELMATTD------------- 226
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+ LV+ D MPG+ G E LK+I++ +E+PV++ ++++ + E LE GA ++ K
Sbjct: 227 -IALVLLDIMMPGIGGIETLKRIRQIYSQEELPVIMATAKDASENVVEALELGANDYITK 285
Query: 138 PLK-PSDVKKLTGHL 151
P+ P + ++ HL
Sbjct: 286 PIDLPVALARIQSHL 300
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+I+ LL+ + +V +G++A E L E V+L+
Sbjct: 54 LVEADDST--RQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE------------SVDLI 99
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL I E + K +PV+++S+++ + +C+ +GA +++KPL+ +
Sbjct: 100 LTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRN 159
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 160 ELRNLWQHVW 169
>gi|228919830|ref|ZP_04083188.1| hypothetical protein bthur0011_8510 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423639005|ref|ZP_17614657.1| hypothetical protein IK7_05413 [Bacillus cereus VD156]
gi|228839846|gb|EEM85129.1| hypothetical protein bthur0011_8510 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401268775|gb|EJR74812.1| hypothetical protein IK7_05413 [Bacillus cereus VD156]
Length = 896
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ L+ L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGIECLDIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|307153265|ref|YP_003888649.1| response regulator receiver protein [Cyanothece sp. PCC 7822]
gi|306983493|gb|ADN15374.1| response regulator receiver protein [Cyanothece sp. PCC 7822]
Length = 123
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL V+DS V R+++ NLL++ V+ A +G+ ALEF+ N + L
Sbjct: 3 EVLLVEDSQVQREMISNLLRDYGLNVSIACDGVEALEFI---------ETFNPD-----L 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+ D MP M GYE+ +++K K +PVV+ SS+ +++GA ++ KP +P
Sbjct: 49 VVLDIVMPRMNGYEVCRRLKSDPKTKHLPVVLCSSKGEEFDRYWGMKQGADAYIAKPFQP 108
Query: 142 SDV 144
++
Sbjct: 109 VEL 111
>gi|148253649|ref|YP_001238234.1| chemotaxis protein CheY [Bradyrhizobium sp. BTAi1]
gi|146405822|gb|ABQ34328.1| Chemotaxis protein cheY [Bradyrhizobium sp. BTAi1]
Length = 121
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+LAVDDS R +V LK + V AE+G AL L G K +L
Sbjct: 4 RILAVDDSKTMRDMVSFTLKKAGFDVAEAEDGKAALNVL--------------TGGKFDL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G L+K ++ S + VP++++++E+ + + GA +++KP P
Sbjct: 50 IITDLNMPNMDGISLIKSVRAGSQHRTVPILILTTESDGAKKADGKAAGATGWLVKPFNP 109
>gi|225872621|ref|YP_002754078.1| chemotaxis protein CheY [Acidobacterium capsulatum ATCC 51196]
gi|225791309|gb|ACO31399.1| chemotaxis protein CheY [Acidobacterium capsulatum ATCC 51196]
Length = 129
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 17/126 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSA---CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
VL VDDS V RKIVE L+++ +V A +G ALE L Q QQ V
Sbjct: 6 VLIVDDSAVMRKIVERSLRSAGLALAQVWEAGSGKEALEVL-----QAQQ---------V 51
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+L+ +D MP M G E L ++ + VP+V++++E + + ++ GA+ ++LKP
Sbjct: 52 DLIFSDINMPEMNGLEFLAQVSAKQLAPGVPIVMITTEGSEEHVVQAVQAGARGYILKPF 111
Query: 140 KPSDVK 145
+K
Sbjct: 112 TAEQIK 117
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL+ +V +GM+A G++ E+ +LV
Sbjct: 46 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAW---GVMRER---------AYAFDLV 93
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G ELL +I S K +PV+++SS++ + C+++GA F++KP++ +
Sbjct: 94 LTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKN 153
Query: 143 DVKKLTGHL 151
+++ L H+
Sbjct: 154 ELRNLWQHV 162
>gi|398977249|ref|ZP_10687006.1| signal transduction histidine kinase [Pseudomonas sp. GM25]
gi|398138491|gb|EJM27512.1| signal transduction histidine kinase [Pseudomonas sp. GM25]
Length = 1071
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
Query: 2 DACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLG 61
D GVA S + ++ HVL +D+++++ I++ L++ C+VT NG++AL+
Sbjct: 824 DPAGVALSPLAEAALPRLELHVLVAEDNLINQAILKEQLESLGCEVTVTGNGLQALQVW- 882
Query: 62 LVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPT 121
N ++V++D MP M GYEL ++I+++ +VP++ +++ +
Sbjct: 883 -------------NQDDFDVVLSDVNMPVMNGYELTRQIRQTD--GQVPIIGITANAMRD 927
Query: 122 RINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
C G +M+KPL+ +D+ L
Sbjct: 928 EGERCESAGMSAWMVKPLRLTDLMSTLSQL 957
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +V A NG+ A + L E N ++LV
Sbjct: 91 VLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKML------EDLTN------HIDLV 138
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 139 LTEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 198
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 199 ELKNLWQHVW 208
>gi|383141480|gb|AFG52081.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 102 ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ESS +KE+PVVV+SSEN+P+R CL+EGA+ F+LKP++ SDVK+L ++
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYM 50
>gi|332639573|pdb|3MYY|A Chain A, Structure Of E. Coli Chey Mutant A113p Bound To Beryllium
Fluoride
gi|332639574|pdb|3MYY|B Chain B, Structure Of E. Coli Chey Mutant A113p Bound To Beryllium
Fluoride
Length = 128
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 3 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 49
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ M +PV++V++E I + GA +++K
Sbjct: 50 -YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 108
Query: 138 PLKPS 142
P P+
Sbjct: 109 PFTPA 113
>gi|297568710|ref|YP_003690054.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924625|gb|ADH85435.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 530
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 14/119 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDD +R+++ L+ V AENG +AL L +
Sbjct: 169 PLILVVDDITANREVLSRRLRRLGYLVMEAENGRQALAML--------------ETGAFD 214
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
LV+ D MP + GYE+L++IK + +++ VPV+++S+ + CLE GA ++ KP
Sbjct: 215 LVLLDILMPELDGYEVLRRIKANELIRHVPVLMISAVGDINSVVRCLEAGADDYLAKPF 273
>gi|343509119|ref|ZP_08746414.1| sensory box sensor histidine kinase/response regulator [Vibrio
scophthalmi LMG 19158]
gi|343514816|ref|ZP_08751882.1| sensory box sensor histidine kinase/response regulator [Vibrio sp.
N418]
gi|342799324|gb|EGU34896.1| sensory box sensor histidine kinase/response regulator [Vibrio sp.
N418]
gi|342805876|gb|EGU41123.1| sensory box sensor histidine kinase/response regulator [Vibrio
scophthalmi LMG 19158]
Length = 1127
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
+S SS NP +L VDD V+ +++++ L+ + +V TA++G AL+ + EQE
Sbjct: 709 ASISSLPENPDGQLLLVVDDEPVNLRVLDSFLRIAGYRVRTAKDGFEALQQI----EQE- 763
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+ LV+ D MPG++GY++ + I+E+ E+PV+++++ N P
Sbjct: 764 ---------RPELVLLDVMMPGLSGYQVCETIRENYSQSELPVIMLTALNQPDDRIRGFN 814
Query: 129 EGAQMFMLKPLKPSDV 144
GA ++ KP ++
Sbjct: 815 SGANDYLSKPFNKQEL 830
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 72/129 (55%), Gaps = 14/129 (10%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVI 83
+ DDS R+I+ LL+ + +VT +G++A E L ++L++
Sbjct: 67 IEADDST--RQIIGALLRKCSYRVTAVPDGLKAWEIL------------RGRPHNIDLIL 112
Query: 84 TDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSD 143
T+ +P ++G+ LL I E + K +PV+++S+++ + + +C+ GA +++KP++ ++
Sbjct: 113 TEVDLPAISGFALLTLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNE 172
Query: 144 VKKLTGHLI 152
+K L H+
Sbjct: 173 LKNLWQHVW 181
>gi|373856013|ref|ZP_09598758.1| response regulator receiver [Bacillus sp. 1NLA3E]
gi|372453850|gb|EHP27316.1| response regulator receiver [Bacillus sp. 1NLA3E]
Length = 232
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 15/124 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K P +L DD I RK+V + L NS+ V TA +G +A + E ++ K
Sbjct: 2 KKPLILIADDEIRLRKLVSDFLLNSSYGVLTAADGKQAYDIF-----MEDRH-------K 49
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
++L+I D MP M G+E+LK+IK+ S VPV+++++++ T + + GA ++ KP
Sbjct: 50 IDLIILDVMMPQMDGWEVLKEIKKIS---SVPVIMLTAKSEETDQLQGFKLGANDYVTKP 106
Query: 139 LKPS 142
PS
Sbjct: 107 FSPS 110
>gi|229090039|ref|ZP_04221290.1| hypothetical protein bcere0021_8740 [Bacillus cereus Rock3-42]
gi|228693269|gb|EEL46979.1| hypothetical protein bcere0021_8740 [Bacillus cereus Rock3-42]
Length = 709
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N L+ + TA+NG+ LE L N T ++L+
Sbjct: 591 ILIVDDDHRNIFALQNALEKQHANIITAQNGLECLEIL-------------KNNTSIDLI 637
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 638 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 694
>gi|345110771|pdb|3OO0|A Chain A, Structure Of Apo Chey A113p
gi|345110772|pdb|3OO0|B Chain B, Structure Of Apo Chey A113p
gi|345110773|pdb|3OO1|A Chain A, Structure Of E. Coli Chey Mutant A113p In The Absence Of
Sulfate
gi|345110774|pdb|3OO1|B Chain B, Structure Of E. Coli Chey Mutant A113p In The Absence Of
Sulfate
gi|145525|gb|AAA23570.1| cheY protein [Escherichia coli]
Length = 129
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ M +PV++V++E I + GA +++K
Sbjct: 51 -YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P P+
Sbjct: 110 PFTPA 114
>gi|423579331|ref|ZP_17555442.1| hypothetical protein IIA_00846 [Bacillus cereus VD014]
gi|401218720|gb|EJR25391.1| hypothetical protein IIA_00846 [Bacillus cereus VD014]
Length = 896
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ L+ L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGIECLDIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|325294250|ref|YP_004280764.1| response regulator receiver modulated CheW protein
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064698|gb|ADY72705.1| response regulator receiver modulated CheW protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 321
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +DDS V RKI+ +L+N V A+NG+ AL+ L E+ + + V L+
Sbjct: 191 ILILDDSPVARKIIRKILENDGHTVFEAQNGIEALQMLHKWLEEAKTTGRDITDY-VQLI 249
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MPGM G +K+KE + ++PV++ +S + +++ GA ++K P
Sbjct: 250 ISDIEMPGMDGLTFTRKVKEDTEFSKIPVIINTSLSDRANVDKSRFVGADAHLVKFDAPD 309
Query: 143 DVKKLTGHLIN 153
VK + H+I+
Sbjct: 310 LVKLVHQHVIS 320
>gi|153870538|ref|ZP_01999919.1| sensory box sensor histidine kinase/response regulator [Beggiatoa
sp. PS]
gi|152072999|gb|EDN70084.1| sensory box sensor histidine kinase/response regulator [Beggiatoa
sp. PS]
Length = 980
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 13 SSSSNPKPP---HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ 69
+S S P+ P + VDD V+ +++ N L ++ A NG+ AL +
Sbjct: 713 ASISQPQQPGHFKIFVVDDEPVNIQVLINHLTLQNYAISIASNGLEALAQV--------- 763
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEE 129
G K ++++ D MP MTGYE+ +K++E + E+P+V+++++N + + E LE
Sbjct: 764 ----EKGYKPDIILLDVMMPKMTGYEVCRKLREVFPVNELPIVMLTAKNQVSDLVEGLES 819
Query: 130 GAQMFMLKPLKPSD-VKKLTGHL 151
GA ++ KP+ + + +L HL
Sbjct: 820 GANDYLTKPISKHELIARLKMHL 842
>gi|383141470|gb|AFG52076.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141472|gb|AFG52077.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141476|gb|AFG52079.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141486|gb|AFG52084.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 102 ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ESS +KE+PVVV+SSEN+P+R CL+EGA+ F+LKP++ SDVK+L ++
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYM 50
>gi|156977382|ref|YP_001448288.1| histidine kinase [Vibrio harveyi ATCC BAA-1116]
gi|156528976|gb|ABU74061.1| hypothetical protein VIBHAR_06169 [Vibrio harveyi ATCC BAA-1116]
Length = 1225
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
+ + S+ ++ VL VDD ++R + + + A +G+ A+E L E
Sbjct: 977 ITQTHSAQTAEYQWNGRVLVVDDDAINRLLFKRQFEKLGVNCQLAASGVEAIEAL----E 1032
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
Q Q +N+ + NLVITD MP M GY+L + +K + V+ +PVV ++EN I +
Sbjct: 1033 QAQNDNVLA---PFNLVITDCHMPDMDGYQLTQALKANKVLASIPVVTCTAENSRNVIEK 1089
Query: 126 CLEEGAQMFMLKPLKPSDVKKL 147
+ G + + KP S+++ L
Sbjct: 1090 AEQSGIETVLFKPYTLSELQAL 1111
>gi|406884359|gb|EKD31782.1| Sensor protein [uncultured bacterium]
Length = 374
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P++L VDD + + ++++++L+ KV NG AL+ V E+E K +
Sbjct: 12 PNILIVDDVLANLRLLDHILREKGYKVRPVTNGTLALQ----VAEKE----------KPD 57
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LV+ D MP + G+E+ ++ KE+ + +VP++ +S+ N I + L G ++ KP K
Sbjct: 58 LVLLDIMMPDLDGFEVCRRFKENPKLSDVPIIFISALNDTKDIVKALTSGGADYITKPFK 117
Query: 141 PSDVK-KLTGHL 151
+V+ ++ HL
Sbjct: 118 AEEVRVRVATHL 129
>gi|361066661|gb|AEW07642.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141474|gb|AFG52078.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141478|gb|AFG52080.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141482|gb|AFG52082.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141488|gb|AFG52085.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141490|gb|AFG52086.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141492|gb|AFG52087.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141494|gb|AFG52088.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141496|gb|AFG52089.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 102 ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ESS +KE+PVVV+SSEN+P+R CL+EGA+ F+LKP++ SDVK+L ++
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYM 50
>gi|120598037|ref|YP_962611.1| putative CheW protein [Shewanella sp. W3-18-1]
gi|120558130|gb|ABM24057.1| putative CheW protein [Shewanella sp. W3-18-1]
Length = 326
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RK++EN L+++ + TA++G ALE L + Q+N S V+ +
Sbjct: 196 ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLMEFETLADQDN-ASISDFVSAI 254
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS 116
ITD MP M G L+K+++ES +++P+V+ SS
Sbjct: 255 ITDVEMPRMDGMHLVKRLRESKAYRQMPIVMFSS 288
>gi|89900169|ref|YP_522640.1| CheA signal transduction histidine kinase [Rhodoferax ferrireducens
T118]
gi|89344906|gb|ABD69109.1| CheA signal transduction histidine kinases [Rhodoferax ferrireducens
T118]
Length = 1888
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S +SS +S + P VL VDDSI R++ + LLK +V A +G++ALE L QE+
Sbjct: 1753 SQASSLTSVNQAPLVLVVDDSITVRRVTQRLLKREGFRVALAIDGLQALERL-----QEE 1807
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
K +V++D MP M G++L++ I+ + ++++P+++++S E
Sbjct: 1808 ---------KPAVVLSDIEMPRMDGFDLVRNIRGDAKLRDLPIIMITSRIAEKHRERARE 1858
Query: 129 EGAQMFMLKPLKPSDVKKL 147
G ++ KP ++ L
Sbjct: 1859 LGVDHYLGKPYSEDELIAL 1877
>gi|424658802|ref|ZP_18096053.1| his Kinase A domain protein [Vibrio cholerae HE-16]
gi|408053994|gb|EKG88988.1| his Kinase A domain protein [Vibrio cholerae HE-16]
Length = 572
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ V ++P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHV--DIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|383141484|gb|AFG52083.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 42/50 (84%)
Query: 102 ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHL 151
ESS +KE+PVVV+SSEN+P+R CL+EGA+ F+LKP++ SDVK+L ++
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYM 50
>gi|146293892|ref|YP_001184316.1| putative CheW protein [Shewanella putrefaciens CN-32]
gi|386314639|ref|YP_006010804.1| response regulator receiver modulated CheW protein [Shewanella
putrefaciens 200]
gi|145565582|gb|ABP76517.1| putative CheW protein [Shewanella putrefaciens CN-32]
gi|319427264|gb|ADV55338.1| response regulator receiver modulated CheW protein [Shewanella
putrefaciens 200]
Length = 326
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS RK++EN L+++ + TA++G ALE L + Q+N S V+ +
Sbjct: 196 ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLMEFETLADQDN-ASISDFVSAI 254
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSS 116
ITD MP M G L+K+++ES +++P+V+ SS
Sbjct: 255 ITDVEMPRMDGMHLVKRLRESKAYRQMPIVMFSS 288
>gi|386826418|ref|ZP_10113525.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
gi|386427302|gb|EIJ41130.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
Length = 1095
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD ++ +++EN LK VT A NGM AL+ + ++GT NL+
Sbjct: 686 ILIVDDDPINLQVLENQLKLENYGVTRAANGMAALDAI-------------NSGTYFNLI 732
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M+G+E+ + I+E E+P+++++++N + + + L+ GA ++ KP +
Sbjct: 733 LLDIMMPRMSGFEVCRIIREKWGANELPIIMLTAKNQVSDLVDGLQAGANDYLSKPFSKN 792
Query: 143 DV 144
++
Sbjct: 793 EL 794
>gi|253827624|ref|ZP_04870509.1| chemotaxis protein CheA [Helicobacter canadensis MIT 98-5491]
gi|313141833|ref|ZP_07804026.1| histidine kinase [Helicobacter canadensis MIT 98-5491]
gi|253511030|gb|EES89689.1| chemotaxis protein CheA [Helicobacter canadensis MIT 98-5491]
gi|313130864|gb|EFR48481.1| histidine kinase [Helicobacter canadensis MIT 98-5491]
Length = 798
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S + ++P +VL VDDS+ DR I++ LK +T A NGM ALE +
Sbjct: 659 SETKKEKNSPSDYNVLIVDDSMTDRAIMKKSLKPLGISITEATNGMEALEIV-------- 710
Query: 69 QNNLNSNGTK-VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
NG K + ++ D MP M GY L +I++ + K +P++ V+S T +
Sbjct: 711 -----KNGDKFFDAILIDIEMPKMDGYTLAGEIRKYAKFKNLPLIAVTSRTSKTDRMRGV 765
Query: 128 EEGAQMFMLKPLKP 141
E G ++ KP P
Sbjct: 766 ESGMTEYITKPYSP 779
>gi|329924374|ref|ZP_08279491.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328940725|gb|EGG37042.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1021
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDD V+ +++E +L +VT A +G AL L + +
Sbjct: 696 PLLLIVDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL--------------DAKAWD 741
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVI+D MP M+GYEL ++I+E + E+PV+++++ + P I GA ++ KP++
Sbjct: 742 LVISDIMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 801
Query: 141 PSDVK 145
+++
Sbjct: 802 ALEIR 806
>gi|163801863|ref|ZP_02195760.1| chemotaxis protein CheY [Vibrio sp. AND4]
gi|159174371|gb|EDP59175.1| chemotaxis protein CheY [Vibrio sp. AND4]
Length = 126
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGT 77
K +L VDD R+IV+NLL++ T A++G+ AL L G
Sbjct: 3 KDMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLL------------KKGG- 49
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+ V+TD+ MPGM G +LLK I+ + +K++PV+++++E +I E + G +++K
Sbjct: 50 -FDFVVTDWNMPGMQGIDLLKHIRADAELKQLPVLMITAEAKREQIIEAAQAGVNGYIVK 108
Query: 138 PLKPSDVKK 146
P + +K+
Sbjct: 109 PFTAATLKE 117
>gi|148264736|ref|YP_001231442.1| response regulator receiver protein [Geobacter uraniireducens Rf4]
gi|146398236|gb|ABQ26869.1| response regulator receiver protein [Geobacter uraniireducens Rf4]
Length = 133
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDDS + ++ ++ C++ A NG AL+ L L QN+ + L+
Sbjct: 5 MLVVDDSSLIHQMYRLVMTRYKCEILDAMNGQEALDILAL------QND-------IQLI 51
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G + L+K + K +P+VV+S+E CL+ GA+ ++ KP PS
Sbjct: 52 LLDINMPVMNGLQFLEKASVLGIAKRIPIVVISTEGKEEDTIRCLKLGARGYLKKPFNPS 111
Query: 143 DVKKLTGHLI 152
D+ L ++
Sbjct: 112 DLHDLIDRIM 121
>gi|427706861|ref|YP_007049238.1| CheA signal transduction histidine kinase [Nostoc sp. PCC 7107]
gi|427359366|gb|AFY42088.1| CheA signal transduction histidine kinase [Nostoc sp. PCC 7107]
Length = 746
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS-NGTKVNL 81
+L VDDSI R++ LL+N + +V A NGM + N+ G+ +L
Sbjct: 627 ILVVDDSITVREMERKLLENHSYQVDVAVNGM---------------DGWNAVRGSDYDL 671
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VITD MP M G+EL IK + +K++PV++VS ++ + LE GA ++ K
Sbjct: 672 VITDIDMPRMNGFELTNHIKTHTKLKQIPVIIVSYKDRQEDRIQGLEAGADYYLTK 727
>gi|374605314|ref|ZP_09678247.1| sensor protein [Paenibacillus dendritiformis C454]
gi|374389073|gb|EHQ60462.1| sensor protein [Paenibacillus dendritiformis C454]
Length = 1015
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 1 MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFL 60
+ A GV +SS +++ ++LAVDD V+ I+ NLL V TA NG A L
Sbjct: 669 LPAPGVPNSSPEMAAA-ADGMNILAVDDDPVNLNILTNLLFAEGYNVATAMNGREAAAML 727
Query: 61 GLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIP 120
+ + +L++ D MP M+GYEL + ++E M E+PV+++++ +
Sbjct: 728 --------------DQKRWDLIVADVMMPHMSGYELTRAVRERFSMSELPVLLLTARSRA 773
Query: 121 TRINECLEEGAQMFMLKPLKPSDVK 145
I+ GA ++ KP++ ++K
Sbjct: 774 EDIDSGFRAGANDYVTKPVEALELK 798
>gi|295703076|ref|YP_003596151.1| two-component response regulator [Bacillus megaterium DSM 319]
gi|294800735|gb|ADF37801.1| two-component response regulator [Bacillus megaterium DSM 319]
Length = 122
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 14/119 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +D V R +V + L++ VT AENG ALEF+ D +L+
Sbjct: 4 ILLAEDEEVLRMLVVDTLEDEGHDVTEAENGEEALEFIKERD--------------FDLI 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
I DY MP TG E+++++KE + V+++S++N + LE GA FM KP P
Sbjct: 50 ILDYMMPVFTGLEVIQQLKEMKDKRHTKVLMLSAKNQAADQSRVLEAGAAYFMSKPFSP 108
>gi|312623101|ref|YP_004024714.1| response regulator receiver protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203568|gb|ADQ46895.1| response regulator receiver protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 123
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDDS V +KIV L +V A +G+ ALE L K++
Sbjct: 2 PKILVVDDSPVVKKIVTTTLVKKGFEVKEALDGVAALEIL--------------LSEKID 47
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVITD MP M G +L ++I+++ + K +PV+++++ P+ + LE GA +++ KP+
Sbjct: 48 LVITDLNMPKMDGLQLTREIRKNPMYKRIPVIMLTTN--PSEEQKALEAGANLYLKKPVT 105
Query: 141 P----SDVKKLTG 149
S V+K G
Sbjct: 106 SEELISHVQKFLG 118
>gi|456735763|gb|EMF60489.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia EPM1]
Length = 910
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
VA + + + SNP H VL DD +R +++ LL+ + KVT G L
Sbjct: 624 VAEAGNVIAFSNPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVL 683
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVS 115
+ L EQ + + I D MPGM+G +LLK+++ ++S M VPV+V+S
Sbjct: 684 DAL------EQAS--------YDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLS 729
Query: 116 SENIPTRINECLEEGAQMFMLKPL 139
++ P I C + GA+ F+ KP+
Sbjct: 730 ADVTPESILRCEQAGARAFLAKPV 753
>gi|408822682|ref|ZP_11207572.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Pseudomonas geniculata N1]
Length = 910
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
VA + + + SNP H VL DD +R +++ LL+ + KVT G L
Sbjct: 624 VAEAGNVIAFSNPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVL 683
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVS 115
+ L EQ + + I D MPGM+G +LLK+++ ++S M VPV+V+S
Sbjct: 684 DAL------EQAS--------YDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLS 729
Query: 116 SENIPTRINECLEEGAQMFMLKPL 139
++ P I C + GA+ F+ KP+
Sbjct: 730 ADVTPESILRCEQAGARAFLAKPV 753
>gi|424668616|ref|ZP_18105641.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
gi|401068878|gb|EJP77402.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
Length = 907
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
VA + + + SNP H VL DD +R +++ LL+ + KVT G L
Sbjct: 621 VAEAGNVIAFSNPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVL 680
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVS 115
+ L EQ + + I D MPGM+G +LLK+++ ++S M VPV+V+S
Sbjct: 681 DAL------EQAS--------YDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLS 726
Query: 116 SENIPTRINECLEEGAQMFMLKPL 139
++ P I C + GA+ F+ KP+
Sbjct: 727 ADVTPESILRCEQAGARAFLAKPV 750
>gi|254521065|ref|ZP_05133120.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
gi|219718656|gb|EED37181.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
Length = 910
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
VA + + + SNP H VL DD +R +++ LL+ + KVT G L
Sbjct: 624 VAEAGNVIAFSNPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVL 683
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVS 115
+ L EQ + + I D MPGM+G +LLK+++ ++S M VPV+V+S
Sbjct: 684 DAL------EQAS--------YDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLS 729
Query: 116 SENIPTRINECLEEGAQMFMLKPL 139
++ P I C + GA+ F+ KP+
Sbjct: 730 ADVTPESILRCEQAGARAFLAKPV 753
>gi|190574186|ref|YP_001972031.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Stenotrophomonas maltophilia
K279a]
gi|190012108|emb|CAQ45731.1| putative histidine kinase/response regulator fusion protein,
regulation of pathogenicity factors [Stenotrophomonas
maltophilia K279a]
Length = 883
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
VA + + + SNP H VL DD +R +++ LL+ + KVT G L
Sbjct: 597 VAEAGNVIAFSNPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVL 656
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVS 115
+ L EQ + + I D MPGM+G +LLK+++ ++S M VPV+V+S
Sbjct: 657 DAL------EQAS--------YDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLS 702
Query: 116 SENIPTRINECLEEGAQMFMLKPL 139
++ P I C + GA+ F+ KP+
Sbjct: 703 ADVTPESILRCEQAGARAFLAKPV 726
>gi|359454385|ref|ZP_09243669.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20495]
gi|414070269|ref|ZP_11406256.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. Bsw20308]
gi|358048556|dbj|GAA79918.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20495]
gi|410807367|gb|EKS13346.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. Bsw20308]
Length = 299
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K VL VDD ++R ++E LK V E+G +AL F+ T+
Sbjct: 3 KKAKVLIVDDDPLNRLVLEKTLKGEH-DVFLVESGEKALTFV--------------KTTQ 47
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
V+L+I D MPG+ GYE+L ++KE+ + + +P++ +S+ ++ LE GA +++KP
Sbjct: 48 VDLIILDVVMPGIDGYEVLVQLKENPITQSIPIIFISANQSHEDESKGLELGAMDYIIKP 107
Query: 139 LKPSDVK 145
S V+
Sbjct: 108 FSASIVR 114
>gi|222149013|ref|YP_002549970.1| two component response regulator [Agrobacterium vitis S4]
gi|221735998|gb|ACM36961.1| two component response regulator [Agrobacterium vitis S4]
Length = 277
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+TA+NG AL+ L + + L
Sbjct: 143 HVLIVDDSPTARALLSSRLKRYNFRVSTADNGATALQLL-------------KSNADIGL 189
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
V+TDY MP + G+EL ++I+ E+ ++ VSS + L+ G FML+P
Sbjct: 190 VVTDYNMPDIDGFELTRRIRAVRGSHELRIIGVSSSSDRLLSARFLKVGGNDFMLRPF 247
>gi|302842110|ref|XP_002952599.1| hypothetical protein VOLCADRAFT_93268 [Volvox carteri f.
nagariensis]
gi|300262238|gb|EFJ46446.1| hypothetical protein VOLCADRAFT_93268 [Volvox carteri f.
nagariensis]
Length = 1021
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 12/117 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL+VDD +++ +VENLL KV A +G AL+FL T +++
Sbjct: 539 VLSVDDDPINQMVVENLLSPEGYKVEQAMSGSEALDFL------------KKTATLPDVI 586
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M+GYE+ ++I+ +P+++VS++ P + + LE G+ ++ KP
Sbjct: 587 LLDIMMPDMSGYEVCQEIRRRYSAVSIPIIMVSAKGHPEHVMKGLEAGSVDYVKKPF 643
>gi|374299800|ref|YP_005051439.1| CheA signal transduction histidine kinase [Desulfovibrio africanus
str. Walvis Bay]
gi|332552736|gb|EGJ49780.1| CheA signal transduction histidine kinase [Desulfovibrio africanus
str. Walvis Bay]
Length = 777
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
PKP VL V+DS+ R +++ +L++S +V TA +G AL L G
Sbjct: 656 PKPKTVLVVEDSVTSRMLLKAVLESSGYRVFTAVDGQEALVRL--------------RGE 701
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
++V++D MP M G EL ++I+E V+ +PV++V+S + P ++ GA +++K
Sbjct: 702 LPDVVVSDVQMPRMDGLELTRRIREDKVLAALPVILVTSLDSPADRERGVDAGANAYIVK 761
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R++V LL+ +V +GM+A E + +LV
Sbjct: 57 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM------------RGRAYAFDLV 104
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G +LL +I + K +PV+++SS++ + +C+++GA F++KP++ +
Sbjct: 105 LTEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKN 164
Query: 143 DVKKLTGHL 151
+++ L H+
Sbjct: 165 ELRNLWQHV 173
>gi|229189197|ref|ZP_04316221.1| hypothetical protein bcere0002_8810 [Bacillus cereus ATCC 10876]
gi|228594241|gb|EEK52036.1| hypothetical protein bcere0002_8810 [Bacillus cereus ATCC 10876]
Length = 896
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N LK + TA+NG+ L+ L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALKKQHANIITAQNGIECLDIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLSEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|428227133|ref|YP_007111230.1| multi-sensor hybrid histidine kinase [Geitlerinema sp. PCC 7407]
gi|427987034|gb|AFY68178.1| multi-sensor hybrid histidine kinase [Geitlerinema sp. PCC 7407]
Length = 1019
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+ P +L VDD +R ++ NLL +VT A NG + + D Q
Sbjct: 814 RTPKILVVDDKWENRSVISNLLTPIGFEVTEAVNGKEGWQ--KICDRQP----------- 860
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+LVITD MP + G+EL+++I++ K++ ++V S+ E G F+ KP
Sbjct: 861 -DLVITDLIMPDINGFELIRQIRQEEAFKDLIIIVSSASVFEADQYRSTEAGGNDFLAKP 919
Query: 139 LKPSD-VKKLTGHL 151
+ S+ +KKL HL
Sbjct: 920 ILASELLKKLQTHL 933
>gi|423515781|ref|ZP_17492262.1| hypothetical protein IG7_00851 [Bacillus cereus HuA2-4]
gi|401166243|gb|EJQ73548.1| hypothetical protein IG7_00851 [Bacillus cereus HuA2-4]
Length = 896
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++N L+ + TA+NG+ LE L N T ++L+
Sbjct: 778 ILIVDDDHRNIFALQNALEKQHANIITAQNGIECLEIL-------------KNNTNIDLI 824
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE ++ I+ + + E+P++ ++++ +P +CL GA ++ KPL
Sbjct: 825 LMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPL 881
>gi|218248996|ref|YP_002374367.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 8801]
gi|218169474|gb|ACK68211.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 8801]
Length = 911
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
SN P +L +DS+ R+++E LL V +G AL+ Q Q N N
Sbjct: 783 SNANQPTILVAEDSVATRRLLERLLTKVGFSVIVCRDGQDALD-------QLSQYNRN-- 833
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+NL+I+D MP + G+ELLK I+ +++PVV+ +S + ++ GA ++
Sbjct: 834 ---INLIISDVEMPRLNGFELLKTIRSDKNWQKIPVVMATSRTGQHHQQQAMQLGANAYL 890
Query: 136 LKPLKPSDVKKLTGHLIN 153
KP+ P+ + + L+N
Sbjct: 891 GKPILPNILLETIDPLLN 908
>gi|337288862|ref|YP_004628334.1| response regulator receiver protein [Thermodesulfobacterium sp.
OPB45]
gi|334902600|gb|AEH23406.1| response regulator receiver protein [Thermodesulfobacterium
geofontis OPF15]
Length = 127
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
+L VDD RKI++N+L K + A++G ALE L KV+
Sbjct: 8 KILVVDDFATMRKIIKNILLQLGFKDILEADDGTTALELL--------------KKQKVD 53
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+I+D+ MP M G ELLK ++ + +K++ ++V++E + E ++ G +++KP
Sbjct: 54 LIISDWNMPKMPGIELLKAVRSNEELKDIKFIMVTAEAQKENVIEAIKYGVNQYVVKPFT 113
Query: 141 PSDVK 145
P +K
Sbjct: 114 PETLK 118
>gi|333996361|ref|YP_004528974.1| CheY-like protein [Treponema azotonutricium ZAS-9]
gi|333737031|gb|AEF82980.1| CheY-like protein [Treponema azotonutricium ZAS-9]
Length = 121
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSA--CKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
+VL VDDS R IV++ C A NG+ AL+ L T++
Sbjct: 2 NVLVVDDSKFMRNIVKSYFSEIGMPCHYFEAVNGLEALKIL--------------QSTRM 47
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+LV+ D+ MP MTG LKK++ +K +P+++V+SE + E + G ++LKP+
Sbjct: 48 DLVLLDWNMPAMTGISFLKKVRAIESLKNLPIIMVTSEGAKANVIEAFKSGVSDYILKPI 107
>gi|256420840|ref|YP_003121493.1| histidine kinase [Chitinophaga pinensis DSM 2588]
gi|256035748|gb|ACU59292.1| histidine kinase [Chitinophaga pinensis DSM 2588]
Length = 577
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
V++ +++++ + P H+L VDD ++ R I E LL+ V A++ AL L +E
Sbjct: 439 VSAVNNTNAQEDLLPLHILVVDDDVMCRTIAERLLRKMVSSVMVADSLENAL---WLANE 495
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
Q NL++ D MPG++G E+L +IK + +VPV++ S++ I++
Sbjct: 496 QPP-----------NLILLDLNMPGISGKEMLYRIKHHPQLADVPVIICSADAYEETISD 544
Query: 126 CLEEGAQMFMLKPLKPS 142
GA +++KP+ S
Sbjct: 545 MKNFGADGYLVKPITTS 561
>gi|257062081|ref|YP_003139969.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 8802]
gi|256592247|gb|ACV03134.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 8802]
Length = 911
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 16 SNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN 75
SN P +L +DS+ R+++E LL V +G AL+ Q Q N N
Sbjct: 783 SNANQPTILVAEDSVATRRLLERLLTKVGFSVIVCRDGQDALD-------QLSQYNRN-- 833
Query: 76 GTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFM 135
+NL+I+D MP + G+ELLK I+ +++PVV+ +S + ++ GA ++
Sbjct: 834 ---INLIISDVEMPRLNGFELLKTIRSDKNWQKIPVVMATSRTGQHHQQQAMQLGANAYL 890
Query: 136 LKPLKPSDVKKLTGHLIN 153
KP+ P+ + + L+N
Sbjct: 891 GKPILPNILLETIDPLLN 908
>gi|402700521|ref|ZP_10848500.1| protein CheY [Pseudomonas fragi A22]
Length = 127
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+I++NLL++ T A++G AL L N ++
Sbjct: 7 ILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTALPIL--------------NQGHIDF 52
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
++TD+ MPGMTG ELL+ ++ +K +PV++V++E +I E + G +++KP
Sbjct: 53 LVTDWNMPGMTGIELLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKPF 110
>gi|423094748|ref|ZP_17082544.1| response regulator [Pseudomonas fluorescens Q2-87]
gi|397888429|gb|EJL04912.1| response regulator [Pseudomonas fluorescens Q2-87]
Length = 122
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+VL VDDS R++V LK++ V A +G AL L NG KV+L
Sbjct: 4 NVLVVDDSASVRQVVGIALKSAGYDVIEASDGKDALGKL--------------NGQKVHL 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+I+D MP M G +K++K+ + K P++++++E+ ++ E GA+ +++KP +P
Sbjct: 50 IISDVNMPNMDGITFVKEVKKLASYKFTPIIMLTTESQESKKQEGQAAGAKAWVVKPFQP 109
Query: 142 SDVKKLTGHLI 152
+ + LI
Sbjct: 110 AQMLAAVSKLI 120
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+D R +V LL+N +VT NG A GL++E NSN +LV
Sbjct: 308 VLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLLEEA------NSN---FDLV 355
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP ++G LL K+ + K VP+V++SS + + CL +GA +++KP++ +
Sbjct: 356 LTDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKN 415
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 416 ELKNLWQHV 424
>gi|194365606|ref|YP_002028216.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
gi|194348410|gb|ACF51533.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
Length = 907
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 6 VASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRAL 57
VA + + + SNP H VL DD +R +++ LL+ + KVT G L
Sbjct: 621 VAEAGNVIAFSNPFLRHRARVRSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVL 680
Query: 58 EFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVS 115
+ L EQ + + I D MPGM+G +LLK+++ ++S M VPV+V+S
Sbjct: 681 DAL------EQAS--------YDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLS 726
Query: 116 SENIPTRINECLEEGAQMFMLKPL 139
++ P I C + GA+ F+ KP+
Sbjct: 727 ADVTPDSILRCEQAGARAFLAKPV 750
>gi|334131774|ref|ZP_08505536.1| Putative response regulator [Methyloversatilis universalis FAM5]
gi|333443247|gb|EGK71212.1| Putative response regulator [Methyloversatilis universalis FAM5]
Length = 642
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 22/123 (17%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMR----ALEFLGLVDEQEQQNNLNSNGTK 78
VL VDD R ++ LL +V TAE+G+R ALEF +
Sbjct: 331 VLVVDDDAATRLTLQTLLVRGGYRVATAEDGVRGMECALEF------------------Q 372
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
++++ D+ MP M G EL + ++++ + + + ++V++S R+ E E G +M+KP
Sbjct: 373 PHIMVVDWVMPQMNGLELARTLRQTRMGRSIYIIVLTSHEEDARLVEAFESGVDDYMVKP 432
Query: 139 LKP 141
L+P
Sbjct: 433 LRP 435
>gi|110596980|ref|ZP_01385270.1| PAS [Chlorobium ferrooxidans DSM 13031]
gi|110341667|gb|EAT60127.1| PAS [Chlorobium ferrooxidans DSM 13031]
Length = 999
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 19/145 (13%)
Query: 8 SSSSSSSSSNPK--PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
S+ SS + P+ P HVL +DS+V++K+ ++L C A NG A +D
Sbjct: 728 SNVSSGGAVTPEKLPLHVLLAEDSVVNQKVALSMLGKLGCFPDVAANGREA------IDA 781
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVM---KEVPVVVVSSENIPTR 122
Q+ + +LV D MP + GYE+ ++I++ + ++PVV +++ +
Sbjct: 782 MRQK--------RYDLVFMDCQMPEIDGYEVTRRIRKDHSLLCSPDIPVVAMTANAMKGD 833
Query: 123 INECLEEGAQMFMLKPLKPSDVKKL 147
+C++ G FM KPLK SD + +
Sbjct: 834 REKCIDAGMDDFMAKPLKKSDFQAI 858
>gi|89893206|ref|YP_516693.1| hypothetical protein DSY0460 [Desulfitobacterium hafniense Y51]
gi|219666479|ref|YP_002456914.1| signal transduction histidine kinase LytS [Desulfitobacterium
hafniense DCB-2]
gi|89332654|dbj|BAE82249.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536739|gb|ACL18478.1| signal transduction histidine kinase, LytS [Desulfitobacterium
hafniense DCB-2]
Length = 1018
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 2 DACGVASSSSSSSSSNPKPPHV------LAVDDSIVDRKIVENLLKNSACKVTTAENGMR 55
D G S S ++ + P+ HV L VDD + K + N+L + VT A NG
Sbjct: 665 DYVGYDGSESLATEALPQTVHVGGEFSILVVDDEFSNLKALMNILTLNQYNVTVAINGEA 724
Query: 56 ALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVS 115
AL L +L I D MPG++GYE+ +KI+E+ E+P+++++
Sbjct: 725 ALHLL-------------KGAFHYDLCILDVMMPGISGYEVCRKIRETYSPLELPILLLT 771
Query: 116 SENIPTRINECLEEGAQMFMLKPLKPSDVK 145
++ +P + GA F+ KP + ++K
Sbjct: 772 AKALPEDMEAGFRAGANDFIEKPFEVRELK 801
>gi|389578765|ref|ZP_10168792.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389400400|gb|EIM62622.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 124
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
+L VDD R+I++N+LK K + A++G A L E Q K++
Sbjct: 6 KILIVDDFATMRRILKNILKQLGFKNLVEADDGTTAWNVL------ESQ--------KID 51
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
L+I+D+ MP MTG ELLKK++ S K+ P ++V++E + E ++ G +++KP
Sbjct: 52 LIISDWNMPKMTGLELLKKVRASDQYKKAPFLMVTAEAQKQNVIEAVQAGVSNYVVKPF 110
>gi|423073142|ref|ZP_17061885.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
gi|361855972|gb|EHL07906.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
Length = 702
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 2 DACGVASSSSSSSSSNPKPPHV------LAVDDSIVDRKIVENLLKNSACKVTTAENGMR 55
D G +S S ++ + P+ HV L VDD + K + N+L + VT A NG
Sbjct: 349 DYVGYDASESLATEALPQTVHVGGEFSILVVDDEFSNLKALMNILTLNQYNVTVAINGEA 408
Query: 56 ALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVS 115
AL L +L I D MPG++GYE+ +KI+E+ E+P+++++
Sbjct: 409 ALHLL-------------KGAFHYDLCILDVMMPGISGYEVCRKIRETYSPLELPILLLT 455
Query: 116 SENIPTRINECLEEGAQMFMLKPLKPSDVK 145
++ +P + GA F+ KP + ++K
Sbjct: 456 AKALPEDMEAGFRAGANDFIEKPFEVRELK 485
>gi|260776785|ref|ZP_05885679.1| chemotaxis regulator CheY [Vibrio coralliilyticus ATCC BAA-450]
gi|260606451|gb|EEX32725.1| chemotaxis regulator CheY [Vibrio coralliilyticus ATCC BAA-450]
Length = 119
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDS+ R++V + L+++ +V TA +G AL N + S +K ++V
Sbjct: 4 ILAVDDSVSIRQMVSHTLRDAGYEVETANDGRDAL------------NKVAS--SKFDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G+EL+K +++ K VP++++++E + + GA +++KP P
Sbjct: 50 ISDVNMPNMGGFELVKALRDKPQYKFVPILMLTTETSTEKKQQGKSAGATGWLVKPFNPE 109
Query: 143 DVKKLTGHLI 152
+ K +I
Sbjct: 110 TLLKTLKRVI 119
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 77/130 (59%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++ DDS R+I+ LL+ + K V T +G++A E L +E+ +N ++L
Sbjct: 69 LVEADDST--RQIIAALLRKCSYKAVATVSDGLKAWEIL-----KERPHN-------IDL 114
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++T+ +P ++GY LL I E + K +PV+++SS++ + +C+ GA +++KP++
Sbjct: 115 ILTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRK 174
Query: 142 SDVKKLTGHL 151
++++ L H+
Sbjct: 175 NELRNLWQHV 184
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R +V LL+N + +VT NG++A + L E N +++V
Sbjct: 97 VLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKIL------EDLTN------HIDIV 144
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 145 LTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKN 204
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 205 ELKNLWQHVW 214
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+D R +V LL+N +VT NG A GL++E NSN +LV
Sbjct: 188 VLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLLEEA------NSN---FDLV 235
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+TD MP ++G LL K+ + K VP+V++SS + + CL +GA +++KP++ +
Sbjct: 236 LTDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKN 295
Query: 143 DVKKLTGHL 151
++K L H+
Sbjct: 296 ELKNLWQHV 304
>gi|392545933|ref|ZP_10293070.1| response regulator receiver protein [Pseudoalteromonas rubra ATCC
29570]
Length = 266
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS + R + +L N A +++ AE+G AL L T +L
Sbjct: 147 ILVVDDSRLARNHIRRVLNNLGATRISEAEHGAEALTIL--------------EDTMFDL 192
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP + G EL + I+ S+ VP+++VSSE T + + G KP +P
Sbjct: 193 IITDFNMPEVNGQELAEAIRNSNEHNHVPILMVSSEANETHLANIAQSGVNALCDKPFEP 252
Query: 142 SDVKKLTGHLI 152
VK+L L+
Sbjct: 253 QVVKQLIYQLL 263
>gi|345859615|ref|ZP_08811956.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
gi|344327299|gb|EGW38736.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
Length = 990
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD + +++++LL KV TA +G+ A+E + D+ ++LV
Sbjct: 661 VLAVDDEATNLRVLKSLLTGDGYKVLTASSGIEAIEIIKDHDD-------------IDLV 707
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M+GYE +KI+E + ++P+++++ N I E GA F+ KP
Sbjct: 708 LMDVMMPKMSGYEACRKIREDYSLYDLPLLILTVRNTLEDITVGFEAGANDFVSKPFVAK 767
Query: 143 DVKKLTGHLI 152
+++ L+
Sbjct: 768 ELRARVATLL 777
>gi|312134491|ref|YP_004001829.1| response regulator receiver protein [Caldicellulosiruptor
owensensis OL]
gi|311774542|gb|ADQ04029.1| response regulator receiver protein [Caldicellulosiruptor
owensensis OL]
Length = 119
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 20/133 (15%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L VDDS V +KIV L +V A +G+ ALE L + E K++
Sbjct: 2 PKILVVDDSPVVKKIVTTTLAKKGFEVKEALDGVAALEVL--ISE------------KID 47
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
LVITD MP M G +L ++I+++ K +P++++++ P+ + LE GA +++ KP+
Sbjct: 48 LVITDLNMPKMDGLQLTREIRKNPTYKRIPIIMLTTN--PSEEQKALEAGANLYLKKPVT 105
Query: 141 P----SDVKKLTG 149
S V+K G
Sbjct: 106 SEELISHVQKFLG 118
>gi|330810305|ref|YP_004354767.1| chemotaxis protein CheY [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378950209|ref|YP_005207697.1| protein CheY2 [Pseudomonas fluorescens F113]
gi|423697951|ref|ZP_17672441.1| response regulator [Pseudomonas fluorescens Q8r1-96]
gi|327378413|gb|AEA69763.1| putative Response regulator, CheY family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|359760223|gb|AEV62302.1| CheY2 [Pseudomonas fluorescens F113]
gi|388005644|gb|EIK66911.1| response regulator [Pseudomonas fluorescens Q8r1-96]
Length = 122
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS R++V LK++ V A +G AL L NG KV+L+
Sbjct: 5 VLVVDDSASVRQVVGIALKSAGYDVIEASDGKDALGKL--------------NGQKVHLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G +K++K+ + K P++++++E+ ++ E GA+ +++KP +P+
Sbjct: 51 ISDVNMPNMDGITFVKEVKKLASYKFTPIIMLTTESQESKKQEGQAAGAKAWVVKPFQPA 110
Query: 143 DVKKLTGHLI 152
+ LI
Sbjct: 111 QMLAAVSKLI 120
>gi|290790028|pdb|3H1G|A Chain A, Crystal Structure Of Chey Mutant T84a Of Helicobacter
Pylori
Length = 129
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 8 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 54
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 55 -LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFT 113
Query: 141 PSDVKK 146
P +K+
Sbjct: 114 PQVLKE 119
>gi|119898694|ref|YP_933907.1| two-component response regulator [Azoarcus sp. BH72]
gi|119671107|emb|CAL95020.1| probable two-component response regulator [Azoarcus sp. BH72]
Length = 301
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD ++RK++ LL+ V A++G +ALE + + V+L+
Sbjct: 8 ILVVDDERINRKLLSELLEEH-HDVVIAKSGEQALERV-------------QADSAVDLI 53
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MPGM+G+++L+++K S K+VPV+ ++S N L+ GA ++ KP P
Sbjct: 54 LLDVVMPGMSGHDVLRRLKASDATKDVPVIFITSLNSVDDEEIGLDLGAADYITKPFHPG 113
Query: 143 DVK-KLTGHL 151
V+ ++ HL
Sbjct: 114 IVRLRVENHL 123
>gi|410086811|ref|ZP_11283518.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
SC01]
gi|421493260|ref|ZP_15940617.1| hypothetical protein MU9_1787 [Morganella morganii subsp. morganii
KT]
gi|455738919|ref|YP_007505185.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
subsp. morganii KT]
gi|400192428|gb|EJO25567.1| hypothetical protein MU9_1787 [Morganella morganii subsp. morganii
KT]
gi|409766645|gb|EKN50735.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
SC01]
gi|455420482|gb|AGG30812.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
subsp. morganii KT]
Length = 130
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSAC-KVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
K + L VDD R+IV NLLK K+ AE+G+ ALE +
Sbjct: 3 AKDLNFLVVDDFSTMRRIVRNLLKELGYNKIEEAEDGVDALEKI--------------RA 48
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
+++ V+ D+ MP M G ELLK I+ +K +PV++V++E I + GA +++
Sbjct: 49 GQIDFVVADWNMPNMDGLELLKTIRADDALKHIPVMMVTAEAKKENIIAAAQAGASGYVV 108
Query: 137 KPLKPS 142
KP +
Sbjct: 109 KPFTAA 114
>gi|290790025|pdb|3GWG|A Chain A, Crystal Structure Of Chey Of Helicobacter Pylori
gi|290790026|pdb|3H1E|A Chain A, Crystal Structure Of Mg(2+) And Beh(3)(-)-Bound Chey Of
Heli Pylori
Length = 129
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 8 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 54
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 55 -LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 113
Query: 141 PSDVKK 146
P +K+
Sbjct: 114 PQVLKE 119
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+I+ LL+ + +V +G++A E L N V+L+
Sbjct: 59 LVEADDST--RQIISALLRKCSYRVAAVPDGLKAWEML------------KGNPESVDLI 104
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ + +P ++GY LL I E V K +PV+++S+ + + +C+ +GA +++KPL+ +
Sbjct: 105 LAEVDLPSISGYALLTLIMEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRN 164
Query: 143 DVKKLTGHLIN 153
+++ L H+
Sbjct: 165 ELRNLWQHVWR 175
>gi|139438438|ref|ZP_01771954.1| Hypothetical protein COLAER_00944 [Collinsella aerofaciens ATCC
25986]
gi|133775977|gb|EBA39797.1| diguanylate cyclase (GGDEF) domain protein [Collinsella aerofaciens
ATCC 25986]
Length = 626
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
V + + S + + P VL VDDS ++R I+ +LK+ C + A+NG AL+ +VD
Sbjct: 257 VVTDADSIEAFQSEKPLVLIVDDSEMNRAILNEMLKDEYC-ILEADNGRTALD---MVDR 312
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
G +++LV+ D MPG++G+E+L + S + +P +++SSE+ +
Sbjct: 313 Y---------GDELSLVLLDIVMPGISGFEVLADLSRRSGIDNLPFIMISSEDSDDMVLR 363
Query: 126 CLEEGAQMFMLKPLKPSDVKKLTGHLI 152
E GA ++ +P V++ + I
Sbjct: 364 AYELGASDYINRPFDSRVVRRRVSNTI 390
>gi|406903298|gb|EKD45424.1| hypothetical protein ACD_69C00300G0001, partial [uncultured
bacterium]
Length = 644
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD++++R+I++ KN + AEN AL L ++ L
Sbjct: 243 ILCVDDNVINREIIQRQTKNWHMRCDLAENAAEALSML---------KKAAADRDPYVLA 293
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ DY MPGM+G+EL++ +++ +K VPV+++SS INE G + + KPL S
Sbjct: 294 LVDYMMPGMSGFELIQIMRQLPEIKNVPVIILSSLGASFSINELKRLGISLSLSKPLHLS 353
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +D+I ++++ +L+ + NG A++ L T +L+
Sbjct: 390 ILLAEDNITNKQVALWILERLGYHADSVSNGYEAIQTL--------------KNTSYDLI 435
Query: 83 ITDYCMPGMTGYELLKKIK--ESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MPGM GY +I+ E +P++ +++ + +CL+ G ++ KP+
Sbjct: 436 LMDCQMPGMDGYTATAEIRKMEGGQQPHIPIIAMTAHALKGDREKCLQVGMDDYISKPI 494
>gi|291295292|ref|YP_003506690.1| response regulator receiver protein [Meiothermus ruber DSM 1279]
gi|290470251|gb|ADD27670.1| response regulator receiver protein [Meiothermus ruber DSM 1279]
Length = 295
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDDS RK++E LL + VTT+E+ + L+ + N NLV
Sbjct: 6 VLVVDDSTSVRKVLEKLLSSRGLVVTTSESAEQGLDAI--------------NHHAPNLV 51
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I D MPGM+G+EL + +K + + +PV+++S + + + + GA + KP P
Sbjct: 52 IADVVMPGMSGFELCQMLKTQASTQNIPVILISGIINESVVTQAQQAGAFDVVSKPFTPD 111
Query: 143 DV 144
D+
Sbjct: 112 DL 113
>gi|268679227|ref|YP_003303658.1| response regulator receiver [Sulfurospirillum deleyianum DSM 6946]
gi|268617258|gb|ACZ11623.1| response regulator receiver [Sulfurospirillum deleyianum DSM 6946]
Length = 126
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 19 KPPHVLAVDDSIVDRKIVENLL-KNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNG 76
K +LAVDD ++ K++ ++L KN V A NG+ A+ N L + G
Sbjct: 3 KKLKILAVDDDFINLKLISSMLRKNQTVDVIMEATNGLDAI------------NLLKTQG 50
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
++LV+ D MP M G E L I+ K++P++V++++ TR NE E GA F++
Sbjct: 51 -DIDLVLLDIKMPVMDGIEFLTNIQSMLEFKKIPIIVLTTDE--TRKNEAFEHGAFDFLV 107
Query: 137 KPLKPSDV 144
KP++ +D+
Sbjct: 108 KPIRENDL 115
>gi|444921808|ref|ZP_21241638.1| Hypothetical protein F387_01920 [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444507081|gb|ELV07263.1| Hypothetical protein F387_01920 [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 1628
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 6 VASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDE 65
V S + P P V+ VDDSI R++ + +L+ + +V A++G+ A+E L V
Sbjct: 1492 VQEKIQESKEAQPHKPLVMVVDDSITMRRVSQRMLERAGYEVILAKDGLEAIETLVNVTP 1551
Query: 66 QEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINE 125
+L++ D MP M G+E+L +I+E+ + + PV++V+S +
Sbjct: 1552 --------------DLIMLDIEMPRMDGFEVLTRIRETEKLMKTPVMMVTSRSGEKHRMR 1597
Query: 126 CLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ GA + KP + ++ K+ L+N
Sbjct: 1598 AFDIGANEYCGKPYQEEEILKVIDQLLN 1625
>gi|330936571|ref|XP_003305441.1| hypothetical protein PTT_18287 [Pyrenophora teres f. teres 0-1]
gi|311317524|gb|EFQ86457.1| hypothetical protein PTT_18287 [Pyrenophora teres f. teres 0-1]
Length = 1259
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 18/147 (12%)
Query: 17 NPKPP------HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQN 70
+PK P HVL V+D++V++K++ L + C V+TA+NG+ AL+ L E+ N
Sbjct: 1114 SPKDPPNEACLHVLVVEDNLVNQKVLCKQLTKAGCNVSTADNGVWALKHL------EKTN 1167
Query: 71 -NLNSNGTKVNLVITDYCMPGMTGYELLKKIKE----SSVMKEVPVVVVSSENIPTRINE 125
+++NG +++++ D MP M G +KI+E + K VP++ V++ +I+
Sbjct: 1168 LRVDTNGIPLSIILIDCEMPEMDGLTCCRKIREMEQNGKLTKHVPIIAVTANIRGGQIDT 1227
Query: 126 CLEEGAQMFMLKPLK-PSDVKKLTGHL 151
E G + KP + P + K+ G L
Sbjct: 1228 AKEAGMDEVIGKPFRIPDLLAKMKGLL 1254
>gi|372487937|ref|YP_005027502.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Dechlorosoma suillum PS]
gi|359354490|gb|AEV25661.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Dechlorosoma suillum PS]
Length = 266
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL VDDS V RK + ++L+N + A NG A+ LG T V+L
Sbjct: 148 VLIVDDSPVSRKFLRHILENLGIENFLEASNGKEAVSVLG--------------ETMVDL 193
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TDY MP M G L++ I++ S VPV++V+SE+ +R+ + G KP P
Sbjct: 194 VLTDYNMPEMDGKALVEYIRQQSWQATVPVLMVTSESNMSRLAAVEQAGVSAICDKPFDP 253
Query: 142 SDVKKL 147
VK L
Sbjct: 254 KTVKGL 259
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
V+ V+ S IV L+N + TA +G AL L +K ++
Sbjct: 12 VVLVEPSHTQAHIVGQFLRNLGVANMQTAASGADALALL--------------RRSKPSV 57
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
VI+ +P MTG EL+ ++ ++ +P V++SSE P ++ + GA + KP
Sbjct: 58 VISAMYLPDMTGTELVYAMRADDDLEMLPFVLISSETRPKVLDPIRQSGACSILPKPF 115
>gi|332296765|ref|YP_004438687.1| response regulator receiver protein [Treponema brennaborense DSM
12168]
gi|332179868|gb|AEE15556.1| response regulator receiver protein [Treponema brennaborense DSM
12168]
Length = 122
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+LAVDDS+ RK + +L +V AE+G L + + K L
Sbjct: 5 KILAVDDSVSIRKSISFILSQEGYEVVEAEDGADGL--------------VRAKADKFGL 50
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD MP M G +L+K+++++ K P++V+++EN +++ E GA +++KP
Sbjct: 51 IITDINMPNMDGIQLIKELRQTVEYKFTPIIVLTTENQDSKMQEGKAAGATGWIVKPFAS 110
Query: 142 SD----VKKLTG 149
VKK+ G
Sbjct: 111 EKLIAVVKKIIG 122
>gi|116252628|ref|YP_768466.1| two component response regulator transcriptional regulatory protein
[Rhizobium leguminosarum bv. viciae 3841]
gi|115257276|emb|CAK08371.1| putative two component response regulator transcriptional
regulatory protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVL VDDS R ++ + LK +V+ AE+G +ALE L + L
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEIL-------------KANRDIGL 175
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
VITDY MP + G+EL ++I+ + E+ ++ VSS + L+ G FML+P
Sbjct: 176 VITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLRPF 233
>gi|104780757|ref|YP_607255.1| sensor histidine kinase/response regulator [Pseudomonas entomophila
L48]
gi|95109744|emb|CAK14447.1| putative sensor histidine kinase/response regulator hybrid
[Pseudomonas entomophila L48]
Length = 784
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 15 SSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNS 74
+S + +L V+D+ V++ + + +L C+V A +G ALE L EQE
Sbjct: 657 ASRERRARILLVEDNPVNQLVAKGMLAKLGCQVQVAAHGAEALELL----EQET------ 706
Query: 75 NGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMF 134
+LV+ D MP M GYE ++I++S E+P+V +++ +P C G +
Sbjct: 707 ----FDLVLMDCNMPVMDGYEASRRIRQSGRWPELPIVALTANAMPEERERCRAAGMNDY 762
Query: 135 MLKPLKPSDVKKLTGH 150
+ KP + ++ L H
Sbjct: 763 LAKPFRREELLALIDH 778
>gi|428776207|ref|YP_007167994.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Halothece sp. PCC 7418]
gi|428690486|gb|AFZ43780.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Halothece sp. PCC 7418]
Length = 578
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L VDD + ++ENLL ++ A+ G ALE L V K++L+
Sbjct: 11 ILIVDDDPDNYDVIENLLYAQDYQLYYAQEGKIALEQLREV--------------KIDLI 56
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G EL + IK + VP+++V++ N +++CLE GA F+ KPL +
Sbjct: 57 LLDLMMPEMDGLELCQIIKRDRAYQGVPIIMVTALNTTVNLSQCLEAGADDFIGKPLNGT 116
Query: 143 DVK 145
+++
Sbjct: 117 ELR 119
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+ R+I+ LL+ KV +G++A E L ++L+
Sbjct: 58 VLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL------------KGRPRSIDLI 105
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL I E + K +PV+++SS++ + + +C+ GA +++KP++ +
Sbjct: 106 LTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRIN 165
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 166 ELRNLWQHVW 175
>gi|119493892|ref|ZP_01624456.1| Response regulator receiver domain protein (CheY) [Lyngbya sp. PCC
8106]
gi|119452369|gb|EAW33561.1| Response regulator receiver domain protein (CheY) [Lyngbya sp. PCC
8106]
Length = 117
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Query: 24 LAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVI 83
+ V+DS+ R+++ NLLK+S VT A +G+ AL EQ Q++ +LV+
Sbjct: 1 MVVEDSVTQREMISNLLKDSGLHVTVASDGVEAL-------EQVQKHC-------PDLVV 46
Query: 84 TDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSD 143
D MP M GYEL +++K + + VV+ SS+ +++GA ++ KP +P++
Sbjct: 47 LDIVMPRMNGYELCRRLKSDPKTQSIAVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPTE 106
Query: 144 V 144
+
Sbjct: 107 L 107
>gi|398814805|ref|ZP_10573483.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
gi|398035893|gb|EJL29119.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
Length = 1042
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
A+ ++ N P +L VDD V+ +++E +L +VT +G AL L D +
Sbjct: 687 ATKPTTLLDVNRDRPRLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL---DTK 743
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
E +LVI+D MP M+GYEL + I+E + E+PV+++++ + P I
Sbjct: 744 EW-----------DLVISDIMMPQMSGYELTRMIRERFTLTELPVLLLTARSQPKDIQSG 792
Query: 127 LEEGAQMFMLKPLKPSDVK 145
GA ++ KP++ ++K
Sbjct: 793 FLAGANDYVTKPVEGMEIK 811
>gi|343495394|ref|ZP_08733545.1| CheY [Vibrio nigripulchritudo ATCC 27043]
gi|342822837|gb|EGU57515.1| CheY [Vibrio nigripulchritudo ATCC 27043]
Length = 119
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+LAVDDS+ R++V + LK++ +V TA +G AL+ + TK ++V
Sbjct: 4 ILAVDDSVSIRQMVSHTLKDAGYEVETANDGSDALK--------------KAKMTKFDVV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G+EL++ I+ + K +P++++++E + E GA +++KP P
Sbjct: 50 ISDVNMPVMGGFELVRAIRGNPQYKFIPILMLTTETSMEKKQEGKSAGATGWLVKPFNPE 109
Query: 143 DVKKLTGHLI 152
+ K +I
Sbjct: 110 TLLKTLKRVI 119
>gi|338737964|ref|YP_004674926.1| response regulator (CheY-like); diguanylate cyclase (GGDEF) and
response regulator receiver domains [Hyphomicrobium sp.
MC1]
gi|337758527|emb|CCB64352.1| response regulator (CheY-like); diguanylate cyclase (GGDEF) and
response regulator receiver domains [Hyphomicrobium sp.
MC1]
Length = 456
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD + + K++E L+ +V TA +G +AL+ L E E V++V
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDIL----EHES----------VDVV 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MPGM G+E ++IK S + +PVV+V++ + P+ LE GA F+ KP+
Sbjct: 51 LLDVMMPGMDGFETCRRIKGSHLTHHIPVVMVTALDQPSDKVLGLESGADDFLTKPV 107
>gi|317051532|ref|YP_004112648.1| response regulator receiver [Desulfurispirillum indicum S5]
gi|316946616|gb|ADU66092.1| response regulator receiver [Desulfurispirillum indicum S5]
Length = 126
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K ++ VDDS R+I++N L K + A+NG+ L LG +N
Sbjct: 4 KDIKIITVDDSSTMRRIIKNTLTRLGFKDIIEADNGVTGLAALG-------EN------- 49
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
KV+LVITD+ MP M G + +K I+ + K +P++++++E I E L G +++K
Sbjct: 50 KVDLVITDWNMPEMDGLQFVKAIRTNEEYKHLPILMITTEAAKEDILEALRSGVNNYIVK 109
Query: 138 PLKP 141
P P
Sbjct: 110 PFTP 113
>gi|427738852|ref|YP_007058396.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
gi|427373893|gb|AFY57849.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
Length = 1048
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
++L VDD V+ +++ N L +VT A +G ALE + NG KV+L
Sbjct: 735 NILIVDDEPVNLQVLNNHLSLQKYRVTQASSGAEALEII-------------ENGDKVDL 781
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++ D MP M+GY++ K++E ++PVV+++++N T I + GA ++ KP
Sbjct: 782 MLLDIMMPKMSGYKVCAKLREKYAPHQLPVVMLTAKNQVTNIVTGFKFGANDYLTKPFHK 841
Query: 142 SD-VKKLTGHL 151
+ + ++ HL
Sbjct: 842 DELLTRIKSHL 852
>gi|430748143|ref|YP_007207272.1| PAS domain-containing protein [Singulisphaera acidiphila DSM 18658]
gi|430019863|gb|AGA31577.1| PAS domain S-box [Singulisphaera acidiphila DSM 18658]
Length = 1519
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD+ +R+I+E +L N K TT G A+ L G LV
Sbjct: 1121 VLIVDDNATNRRILEEMLTNWGMKPTTVAGGREAIATLA---------EARGAGRPFALV 1171
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MPGM G+ L ++IK+ S + ++++SS N C E G +++KP++ S
Sbjct: 1172 LLDAMMPGMDGFTLAEQIKQDSALTGSTLMMLSSANRREDAARCQELGVATYLMKPIRES 1231
Query: 143 DV 144
+
Sbjct: 1232 SL 1233
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L +D+ +++++ LLK +V NG AL + NG++ + V
Sbjct: 1273 LLLAEDNAINQRLAMALLKKQGHQVVVVNNGREALAAM--------------NGSRFDAV 1318
Query: 83 ITDYCMPGMTGYELLKKI--KESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ D MP M G+E I +E+ ++ +++ + + CL+ G ++ KPL+
Sbjct: 1319 LMDVQMPEMDGFEATAAIRSREAGTGVHTTIIAMTAHALKGDRDRCLDAGMDAYVSKPLR 1378
Query: 141 PSDV 144
D+
Sbjct: 1379 LEDL 1382
>gi|424636619|ref|ZP_18074630.1| his Kinase A domain protein [Vibrio cholerae HC-55A1]
gi|408024929|gb|EKG62009.1| his Kinase A domain protein [Vibrio cholerae HC-55A1]
Length = 572
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 441 STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 493
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N++ +LV+ D MP M G K +++ + ++P++ +++ + C+
Sbjct: 494 EKNHV------FDLVLMDISMPIMDGIAATKILRDKHI--DIPIIALTAHTAGSDKQNCI 545
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 546 DAGMNDIVLKPIRSKDIMEVVKRFLN 571
>gi|312880015|ref|ZP_07739815.1| response regulator receiver protein [Aminomonas paucivorans DSM
12260]
gi|310783306|gb|EFQ23704.1| response regulator receiver protein [Aminomonas paucivorans DSM
12260]
Length = 286
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 7 ASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQ 66
A + + +S P +L DD+ V R ++++LK V A+NG A
Sbjct: 150 AGGTGTEASRQP----ILIADDAPVIRVGLKHILKEMDLPVLEADNGNEAYRL------- 198
Query: 67 EQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINEC 126
S T L++TD MPGM G+ L+ + + + + P++V+SS R+ +
Sbjct: 199 -------SLATPPRLLLTDLVMPGMDGFSLISRFRGTPSNAKTPIIVISSYGDRARLVKA 251
Query: 127 LEEGAQMFMLKPLKPSDVK-KLTGHL 151
L GA F++KP +P VK K+ HL
Sbjct: 252 LRSGANDFIVKPFRPEVVKEKIRRHL 277
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
+ S + P VLAVDD+IV KI+ LL+ KVT ALE L +E
Sbjct: 7 TPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEML-----REN 61
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+ N ++VITD MP M G+ LLK I + ++PV++ S + + + + +
Sbjct: 62 RENF-------DIVITDVKMPDMDGFTLLKII---GLEMDIPVIMTSVNDDRSTVLKGIR 111
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLIN 153
GA+ ++LKP++ ++K + H++
Sbjct: 112 HGARDYLLKPVRVLEIKNIWQHVVR 136
>gi|427730794|ref|YP_007077031.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
gi|427366713|gb|AFY49434.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
Length = 121
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK S VT A +G+ ALE + +LV
Sbjct: 4 VLIVEDSLAQREMITDLLKASGLTVTHATDGLEALEAI--------------QTEPPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|443631051|ref|ZP_21115232.1| two component sensor histidine kinase YwpD [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|443348856|gb|ELS62912.1| two component sensor histidine kinase YwpD [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 1026
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S S+ S P +L VDD+I KI+ ++L+ V A+NGM ALE +
Sbjct: 675 SMSTPYYSEKIDAPTILIVDDNIDSLKILIDMLEGVPYNVIAAKNGMEALEVVSC----- 729
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
TK++LVI D MP MTG+E+ +I+E M ++PV+++++ I +
Sbjct: 730 ---------TKLDLVILDLMMPDMTGFEVCMRIRERFSMVDLPVLMITAAIIGHDKYKAF 780
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLI 152
GA + KP S+ +LI
Sbjct: 781 HAGANDILQKPYHYSEFMARIKNLI 805
>gi|207092642|ref|ZP_03240429.1| chemotaxis protein [Helicobacter pylori HPKX_438_AG0C1]
gi|419418750|ref|ZP_13959053.1| Chemotactic response regulator, two-component system [Helicobacter
pylori NCTC 11637 = CCUG 17874]
gi|2199516|gb|AAB66375.1| chemotaxis response regulator [Helicobacter pylori]
gi|384373639|gb|EIE29109.1| Chemotactic response regulator, two-component system [Helicobacter
pylori NCTC 11637 = CCUG 17874]
Length = 124
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 49
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 50 -LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 108
Query: 141 PSDVKK 146
P +K+
Sbjct: 109 PQVLKE 114
>gi|239907541|ref|YP_002954282.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239797407|dbj|BAH76396.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 130
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 16/128 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
+L VDD RKI++++L+ K + AE+G AL +L N
Sbjct: 7 KILVVDDFSTMRKIIKSMLRRVGIKSIDDAEDGKIALSYL--------------KSKPYN 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
L+I D+ MP M+G +LL+ IK +K VPV++V+SE +++ ++ GA +++KP
Sbjct: 53 LIILDWNMPNMSGLDLLRSIKSDETLKNVPVLMVTSEAKESQVIIAVQAGASSYIVKPFT 112
Query: 141 PSD-VKKL 147
+ +KKL
Sbjct: 113 EATLIKKL 120
>gi|427734366|ref|YP_007053910.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
gi|427369407|gb|AFY53363.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
Length = 121
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DSI R+++ +LLK S VT A +G+ AL+ + +LV
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLSVTHASDGLEALQTI--------------QSICPDLV 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|354603696|ref|ZP_09021690.1| hypothetical protein HMPREF9450_00605 [Alistipes indistinctus YIT
12060]
gi|353348621|gb|EHB92892.1| hypothetical protein HMPREF9450_00605 [Alistipes indistinctus YIT
12060]
Length = 393
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 17 NPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNG 76
NP VL VDD+I + +++ L+ N ++ TA NGM AL+ + E+E +
Sbjct: 6 NPSEYTVLIVDDTIANVLLLKVLIGNQKYRIVTAGNGMEALQAV----EKESPD------ 55
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
L++ D MPGM GYE+ +K+K +E+P++ +++ N I + + GA ++
Sbjct: 56 ----LILLDIMMPGMNGYEVAEKLKADPQTQEIPIIFLTALNSTNDIVKGFKTGASDYIS 111
Query: 137 KPLKPSDVKKLTGHLIN 153
KP ++ H I+
Sbjct: 112 KPFNKEELLIRVTHQIS 128
>gi|15645681|ref|NP_207858.1| chemotaxis protein (cheY) [Helicobacter pylori 26695]
gi|108562805|ref|YP_627121.1| chemotaxis protein [Helicobacter pylori HPAG1]
gi|208434327|ref|YP_002265993.1| chemotaxis protein [Helicobacter pylori G27]
gi|254779070|ref|YP_003057175.1| Chemotactic response regulator, two-component system [Helicobacter
pylori B38]
gi|298736679|ref|YP_003729207.1| chemotaxis family two-component system response regulator CheY
[Helicobacter pylori B8]
gi|308182549|ref|YP_003926676.1| Chemotactic response regulator, two-component system [Helicobacter
pylori PeCan4]
gi|308184182|ref|YP_003928315.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SJM180]
gi|385218665|ref|YP_005780140.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Gambia94/24]
gi|385220219|ref|YP_005781691.1| Chemotactic response regulator, two-component system [Helicobacter
pylori India7]
gi|385226636|ref|YP_005786560.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SNT49]
gi|386745884|ref|YP_006219101.1| Chemotactic response regulator, two-component system [Helicobacter
pylori HUP-B14]
gi|410024295|ref|YP_006893548.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif1]
gi|410502061|ref|YP_006936588.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif2]
gi|410682581|ref|YP_006934983.1| Chemotactic response regulator, two-component system [Helicobacter
pylori 26695]
gi|419416650|ref|ZP_13957182.1| Chemotactic response regulator, two-component system [Helicobacter
pylori P79]
gi|444374577|ref|ZP_21173882.1| Chemotactic response regulator, two-component system [Helicobacter
pylori A45]
gi|2500738|sp|P71403.2|CHEY_HELPY RecName: Full=Chemotaxis protein CheY homolog
gi|2314217|gb|AAD08113.1| chemotaxis protein (cheY) [Helicobacter pylori 26695]
gi|4103138|gb|AAD01682.1| CheY [Helicobacter pylori NCTC 11637 = CCUG 17874]
gi|107836578|gb|ABF84447.1| chemotaxis protein [Helicobacter pylori HPAG1]
gi|208432256|gb|ACI27127.1| chemotaxis protein [Helicobacter pylori G27]
gi|254000981|emb|CAX28925.1| Chemotactic response regulator, two-component system [Helicobacter
pylori B38]
gi|281429784|gb|ADA70031.1| CheY [Helicobacter pylori SS1]
gi|298355871|emb|CBI66743.1| two-component system, chemotaxis family, response regulator CheY
[Helicobacter pylori B8]
gi|308060102|gb|ADO01998.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SJM180]
gi|308064734|gb|ADO06626.1| Chemotactic response regulator, two-component system [Helicobacter
pylori PeCan4]
gi|317009026|gb|ADU79606.1| Chemotactic response regulator, two-component system [Helicobacter
pylori India7]
gi|317013823|gb|ADU81259.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Gambia94/24]
gi|344331549|gb|AEN16579.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SNT49]
gi|384374833|gb|EIE30192.1| Chemotactic response regulator, two-component system [Helicobacter
pylori P79]
gi|384552133|gb|AFI07081.1| Chemotactic response regulator, two-component system [Helicobacter
pylori HUP-B14]
gi|409894222|gb|AFV42280.1| Chemotactic response regulator, two-component system [Helicobacter
pylori 26695]
gi|409895952|gb|AFV43874.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif1]
gi|409897612|gb|AFV45466.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif2]
gi|443620880|gb|ELT81321.1| Chemotactic response regulator, two-component system [Helicobacter
pylori A45]
Length = 124
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 49
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 50 -LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 108
Query: 141 PSDVKK 146
P +K+
Sbjct: 109 PQVLKE 114
>gi|339006832|ref|ZP_08639407.1| autoinducer 2 sensor kinase/phosphatase LuxQ [Brevibacillus
laterosporus LMG 15441]
gi|338776041|gb|EGP35569.1| autoinducer 2 sensor kinase/phosphatase LuxQ [Brevibacillus
laterosporus LMG 15441]
Length = 948
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
K HVL VDD + + L+ KV A NG LE L N
Sbjct: 826 KGKHVLVVDDDNRNVFALTTTLEREGFKVIAASNGRECLEIL-------------DNVQH 872
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
+++++ D MP M GYE ++ I++ + MK VP++ ++++ + +CL GA ++ KP
Sbjct: 873 MDIILMDIMMPEMDGYEAMQAIRQKADMKNVPIIALTAKAMKYDREKCLRAGASDYISKP 932
Query: 139 LKPSDV 144
LK S +
Sbjct: 933 LKTSQL 938
>gi|253700458|ref|YP_003021647.1| chemotaxis protein CheA [Geobacter sp. M21]
gi|251775308|gb|ACT17889.1| CheA signal transduction histidine kinase [Geobacter sp. M21]
Length = 679
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G +S S + + VL VDDSI R + +++L V TA +G AL+
Sbjct: 544 GRKASRSGDELTEERRFKVLVVDDSITTRTMEQSILLTQGYDVVTAVSGEDALQ------ 597
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
G +L+I+D MPG+ G+EL + ++ES +E+P+++VSS +
Sbjct: 598 --------KCEGEDFDLIISDVEMPGINGFELTRTLRESERYREIPIIIVSSLSRDEDKR 649
Query: 125 ECLEEGAQMFMLK 137
+ L GAQ +++K
Sbjct: 650 QALRSGAQAYIVK 662
>gi|91223563|ref|ZP_01258828.1| chemotaxis protein CheY [Vibrio alginolyticus 12G01]
gi|153835420|ref|ZP_01988087.1| chemotaxis protein CheY [Vibrio harveyi HY01]
gi|262393606|ref|YP_003285460.1| chemotaxis protein CheY [Vibrio sp. Ex25]
gi|350532080|ref|ZP_08911021.1| hypothetical protein VrotD_13175 [Vibrio rotiferianus DAT722]
gi|388598401|ref|ZP_10156797.1| hypothetical protein VcamD_00731 [Vibrio campbellii DS40M4]
gi|424029548|ref|ZP_17769075.1| chemotaxis protein CheY [Vibrio cholerae HENC-01]
gi|424047355|ref|ZP_17784915.1| chemotaxis protein CheY [Vibrio cholerae HENC-03]
gi|444425882|ref|ZP_21221313.1| hypothetical protein B878_08070 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|451972336|ref|ZP_21925545.1| chemotaxis protein CheY [Vibrio alginolyticus E0666]
gi|91191649|gb|EAS77913.1| chemotaxis protein CheY [Vibrio alginolyticus 12G01]
gi|148868041|gb|EDL67224.1| chemotaxis protein CheY [Vibrio harveyi HY01]
gi|262337200|gb|ACY50995.1| chemotaxis regulator CheY [Vibrio sp. Ex25]
gi|408884064|gb|EKM22822.1| chemotaxis protein CheY [Vibrio cholerae HENC-03]
gi|408886599|gb|EKM25272.1| chemotaxis protein CheY [Vibrio cholerae HENC-01]
gi|444240857|gb|ELU52390.1| hypothetical protein B878_08070 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|451931697|gb|EMD79382.1| chemotaxis protein CheY [Vibrio alginolyticus E0666]
Length = 126
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+IV+NLL++ T A++G+ AL L D +
Sbjct: 7 ILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD--------------FDF 52
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LLK I+ + +K +PV+++++E +I E + G +++KP
Sbjct: 53 VVTDWNMPGMQGIDLLKHIRADAELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTA 112
Query: 142 SDVKK 146
+ +K+
Sbjct: 113 ATLKE 117
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 6 VASSSSSSSSSNPK-PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
VA+ SS + P+ P VL + R I+ LL+ +V A +G++A + L
Sbjct: 27 VAAGSSRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDIL---- 82
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
++ + N ++LV+T+ +P M+G+ LL I E K +PV+++SS + + +
Sbjct: 83 ---KEKSFN-----IDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVF 134
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
+C+ +GA F++KP++ ++++ L H+
Sbjct: 135 KCMLKGAADFLVKPIRKNELRNLWQHVW 162
>gi|434400506|ref|YP_007134510.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera PCC
7437]
gi|428271603|gb|AFZ37544.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera PCC
7437]
Length = 1048
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
+ S++++ S+ + P +L ++DS+V R+ ++ L+ +V A NG A+ +
Sbjct: 909 AIKKSNNTTISNAAEVPKILVIEDSVVQRQSLKLTLEKGGYQVIQAGNGQEAIAYF---- 964
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
++ LVI D MP M G+E L + S + +VP+++++S + P
Sbjct: 965 ---------KENPEITLVICDVEMPVMNGFEFLDYCRNDSSLSQVPIIMLTSRSSPKHRQ 1015
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
L GA+ ++ KP ++ + LIN
Sbjct: 1016 TALSLGAKFYLTKPYSNQELLETLAQLIN 1044
>gi|17228424|ref|NP_484972.1| two-component system, regulatory protein [Nostoc sp. PCC 7120]
gi|75906731|ref|YP_321027.1| response regulator receiver domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|17130275|dbj|BAB72886.1| two-component system, regulatory protein [Nostoc sp. PCC 7120]
gi|75700456|gb|ABA20132.1| Response regulator receiver domain protein (CheY) [Anabaena
variabilis ATCC 29413]
Length = 121
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V+DS+ R+++ +LLK S VT A +G+ ALE + +E+ +L V
Sbjct: 4 VLIVEDSLAQREMITDLLKASGLTVTHATDGLEALEAI-----KEEPPDL---------V 49
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M GYE+ +++K + VPVV+ SS+ +++GA ++ KP +P+
Sbjct: 50 VLDIVMPKMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPT 109
Query: 143 DV 144
++
Sbjct: 110 EL 111
>gi|1653994|emb|CAA57487.1| cheY [Helicobacter pylori NCTC 11637 = CCUG 17874]
Length = 140
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 19 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 65
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 66 -LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 124
Query: 141 PSDVKK 146
P +K+
Sbjct: 125 PQVLKE 130
>gi|28899005|ref|NP_798610.1| chemotaxis protein CheY [Vibrio parahaemolyticus RIMD 2210633]
gi|153836991|ref|ZP_01989658.1| chemotaxis protein CheY [Vibrio parahaemolyticus AQ3810]
gi|308094692|ref|ZP_05891154.2| chemotaxis protein CheY [Vibrio parahaemolyticus AN-5034]
gi|308095294|ref|ZP_05904775.2| chemotaxis protein Chey [Vibrio parahaemolyticus Peru-466]
gi|308125864|ref|ZP_05777806.2| chemotaxis protein CheY [Vibrio parahaemolyticus K5030]
gi|308126173|ref|ZP_05908347.2| chemotaxis protein CheY [Vibrio parahaemolyticus AQ4037]
gi|417319268|ref|ZP_12105826.1| chemotaxis protein CheY [Vibrio parahaemolyticus 10329]
gi|6952814|gb|AAF32415.1| chemotaxis protein CheY [Vibrio parahaemolyticus]
gi|28807224|dbj|BAC60494.1| chemotaxis protein CheY [Vibrio parahaemolyticus RIMD 2210633]
gi|149749764|gb|EDM60509.1| chemotaxis protein CheY [Vibrio parahaemolyticus AQ3810]
gi|308088882|gb|EFO38577.1| chemotaxis protein Chey [Vibrio parahaemolyticus Peru-466]
gi|308094275|gb|EFO43970.1| chemotaxis protein CheY [Vibrio parahaemolyticus AN-5034]
gi|308107348|gb|EFO44888.1| chemotaxis protein CheY [Vibrio parahaemolyticus AQ4037]
gi|308115401|gb|EFO52941.1| chemotaxis protein CheY [Vibrio parahaemolyticus K5030]
gi|328474458|gb|EGF45263.1| chemotaxis protein CheY [Vibrio parahaemolyticus 10329]
Length = 126
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+IV+NLL++ T A++G+ AL L D +
Sbjct: 7 ILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD--------------FDF 52
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
V+TD+ MPGM G +LLK I+ + +K +PV+++++E +I E + G +++KP
Sbjct: 53 VVTDWNMPGMQGIDLLKHIRADAELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTA 112
Query: 142 SDVKK 146
+ +K+
Sbjct: 113 ATLKE 117
>gi|366166781|ref|ZP_09466536.1| response regulator receiver protein [Acetivibrio cellulolyticus
CD2]
Length = 148
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L DD+++D I+ N L + +A NG ALE L E +N ++L+
Sbjct: 5 ILVTDDNVLDNAIIRNYLYKERYNIVSALNGREALELL------ESRN--------IDLI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP M GYE +K ++ KE+P++V SS + I + LE +++KPL
Sbjct: 51 LLDMVMPVMDGYEFMKVFSKTPFYKEIPIIVTSSLDGVENIEKILEYDVFDYIIKPL 107
>gi|302878246|ref|YP_003846810.1| response regulator receiver protein [Gallionella capsiferriformans
ES-2]
gi|302581035|gb|ADL55046.1| response regulator receiver protein [Gallionella capsiferriformans
ES-2]
Length = 129
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 22 HVLAVDDSIVDRKIVENLLKN-SACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
L VDD R+IV NLLK V AE+G+ AL+ L +
Sbjct: 7 RFLVVDDFSTMRRIVRNLLKELGFVNVQEAEDGVEALKKL--------------RAETYD 52
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
V++D+ MP MTG ELL++I+ + +K +PV++V++E I E + GA +++KP
Sbjct: 53 FVVSDWNMPNMTGIELLREIRADAKLKHLPVLMVTAEAKRENIIEAAQAGASGYVVKPFT 112
Query: 141 PS 142
+
Sbjct: 113 AA 114
>gi|210134575|ref|YP_002301014.1| chemotaxis protein [Helicobacter pylori P12]
gi|383749979|ref|YP_005425082.1| chemotaxis protein [Helicobacter pylori ELS37]
gi|384897114|ref|YP_005772542.1| chemotaxis protein [Helicobacter pylori Lithuania75]
gi|210132543|gb|ACJ07534.1| chemotaxis protein [Helicobacter pylori P12]
gi|317012219|gb|ADU82827.1| chemotaxis protein [Helicobacter pylori Lithuania75]
gi|380874725|gb|AFF20506.1| chemotaxis protein [Helicobacter pylori ELS37]
Length = 124
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 49
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 50 -LITDWNMPEMNGLDLVKKVRADSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 108
Query: 141 PSDVKK 146
P +K+
Sbjct: 109 PQVLKE 114
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P VL + R ++ LL+ +V A +G++A + L ++ + N V
Sbjct: 42 PVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLL-------KEKSFN-----V 89
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+LV+T+ +P M+G+ LL I E K +PV+++SS + + + +C+ +GA F++KP+
Sbjct: 90 DLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPI 149
Query: 140 KPSDVKKLTGHLI 152
+ ++++ L H+
Sbjct: 150 RKNELRNLWQHVW 162
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 20 PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKV 79
P VL + R ++ LL+ +V A +G++A + L ++ + N +
Sbjct: 43 PVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDIL-------KEKSFN-----I 90
Query: 80 NLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+LV+T+ +P M+G+ LL I E K +PV+++SS + + + +C+ +GA F++KPL
Sbjct: 91 DLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPL 150
Query: 140 KPSDVKKLTGHLI 152
+ ++++ L H+
Sbjct: 151 RKNELRNLWQHVW 163
>gi|422922747|ref|ZP_16955924.1| his Kinase A domain protein [Vibrio cholerae BJG-01]
gi|341644959|gb|EGS69118.1| his Kinase A domain protein [Vibrio cholerae BJG-01]
Length = 570
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 8 SSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQE 67
S+SSS N K H+L V+D+ ++ +++ LL VT AENG++A+E L
Sbjct: 439 STSSSQKIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------- 491
Query: 68 QQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECL 127
++N+ +LV+ D MP M G K +++ + E+P++ +++ + C+
Sbjct: 492 ERNH------AFDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCI 543
Query: 128 EEGAQMFMLKPLKPSDVKKLTGHLIN 153
+ G +LKP++ D+ ++ +N
Sbjct: 544 DAGMNDIVLKPIRSKDIMEVVKRFLN 569
>gi|153011989|ref|YP_001373201.1| multi-sensor hybrid histidine kinase [Ochrobactrum anthropi ATCC
49188]
gi|151563877|gb|ABS17372.1| multi-sensor hybrid histidine kinase [Ochrobactrum anthropi ATCC
49188]
Length = 1141
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L V+D I + + N+L+ +V A NG AL+ L + S T +++V
Sbjct: 1018 ILVVEDDIRNIYALTNILEPRGAEVIIARNGREALDAL--------SKSQASESTAIDIV 1069
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+ D MP M G +KI+E+ K++P++ ++++ +P C+E GA +M KPL
Sbjct: 1070 LMDIMMPVMDGLAATRKIRENPAWKKLPIITLTAKAMPDDQQRCIEAGANDYMAKPL--- 1126
Query: 143 DVKKL 147
DV KL
Sbjct: 1127 DVDKL 1131
>gi|212556629|gb|ACJ29083.1| Response regulator receiver:Metal-dependent phosphohydrolase, HD
subdomain protein [Shewanella piezotolerans WP3]
Length = 121
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
Query: 21 PHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVN 80
P +L +DD + ++ ++L + VTTA +G++ E + + N
Sbjct: 4 PKILVIDDDPICSSLLLSILGDDY-HVTTANSGIQTTEL--------------ATSLQPN 48
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ D MP GY++LK IKE+ + + +PV+++SS N + N L GAQ ++ KP+
Sbjct: 49 CIFLDIMMPDKNGYQVLKDIKENDLTRAIPVIIISSLNENSDENLALRLGAQDYIFKPIT 108
Query: 141 PSDV-KKLTGHL 151
P+++ +KL HL
Sbjct: 109 PAEIYRKLKKHL 120
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,210,776,863
Number of Sequences: 23463169
Number of extensions: 79310406
Number of successful extensions: 369728
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17796
Number of HSP's successfully gapped in prelim test: 43630
Number of HSP's that attempted gapping in prelim test: 317240
Number of HSP's gapped (non-prelim): 66111
length of query: 153
length of database: 8,064,228,071
effective HSP length: 116
effective length of query: 37
effective length of database: 9,637,467,763
effective search space: 356586307231
effective search space used: 356586307231
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)