BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042079
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17 OS=Arabidopsis thaliana
GN=ARR17 PE=2 SV=1
Length = 153
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/149 (67%), Positives = 121/149 (81%), Gaps = 2/149 (1%)
Query: 5 GVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
G S S S SS + HVLAVDD+++DRK+VE +LK S+CKVTTAENG+RALE+LGL D
Sbjct: 4 GCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 63
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
Q Q + +N KVNL+ITDYCMPGMTG+ELLKK+KESS +KEVPVV++SSENIPTRIN
Sbjct: 64 PQ--QTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
+CL GAQMFM KPLK SDV+KL HL+N
Sbjct: 122 KCLASGAQMFMQKPLKLSDVEKLKCHLLN 150
>sp|Q9SHC2|ARR16_ARATH Two-component response regulator ARR16 OS=Arabidopsis thaliana
GN=ARR16 PE=1 SV=1
Length = 164
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 112/132 (84%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDD+++DRK+VE LLK S CKVTTAEN +RALE+LGL D+ + + L N KV+L
Sbjct: 30 HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSL 89
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTG+ELLKK+KESS ++EVPVV++SSENIPTRIN+CL GAQMFM KPLK
Sbjct: 90 IITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKL 149
Query: 142 SDVKKLTGHLIN 153
+DV+KL HL+N
Sbjct: 150 ADVEKLKCHLMN 161
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL +E+ + KV+L
Sbjct: 35 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAE---FDRLKVDL 91
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKESS +EVPVV++SSEN+ TRI+ CLEEGAQ F+LKP+K
Sbjct: 92 IITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKL 151
Query: 142 SDVKKLTGHL 151
+DVK+L HL
Sbjct: 152 ADVKRLRSHL 161
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 106/130 (81%), Gaps = 3/130 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS+VDR ++E LL+ ++CKVT ++G RALEFLGL D++ + + KV+L
Sbjct: 34 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAA---VEFDRLKVDL 90
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITDYCMPGMTGYELLKKIKES+ KEVPVV++SSEN+ TRI+ CLEEGA+ F+LKP+K
Sbjct: 91 IITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKL 150
Query: 142 SDVKKLTGHL 151
+DVK+L +L
Sbjct: 151 ADVKRLRSYL 160
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
Query: 9 SSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQ 68
S+ +SS ++PK HVLAVDDS+VDRK +E LL+ S+CKVT ++ RAL++LGL + E
Sbjct: 13 SNDTSSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGEN 70
Query: 69 QNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLE 128
+++ K+NL++TDY MPGMTGYELLKKIKESS +E+PVV++SSENI RI+ CLE
Sbjct: 71 NSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLE 130
Query: 129 EGAQMFMLKPLKPSDVKKLTGHLI 152
EGA+ F+LKP+K +DVK+L L+
Sbjct: 131 EGAEDFLLKPVKLADVKRLRDSLM 154
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 106/142 (74%), Gaps = 3/142 (2%)
Query: 12 SSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN 71
SS +P P HVLAVDDS VDRK +E LL+ S+CKVT ++ RAL++LGL ++ +
Sbjct: 16 SSKFGSPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DVEEKS 72
Query: 72 LNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGA 131
+ KVNL++TDY MPGMTGYELLKKIKESS +EVPVV++SSENI RI+ CLEEGA
Sbjct: 73 VGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGA 132
Query: 132 QMFMLKPLKPSDVKKLTGHLIN 153
+ F+LKP+K SDVK+L L+
Sbjct: 133 EDFLLKPVKLSDVKRLRDSLMK 154
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 106/140 (75%), Gaps = 11/140 (7%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNN---------L 72
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL Q +N +
Sbjct: 10 HVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSNDPNAFSKAPV 67
Query: 73 NSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQ 132
N +VNL+ITDYCMPGMTGY+LLKK+KESS +++PVV++SSEN+P RI+ CLEEGA+
Sbjct: 68 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 127
Query: 133 MFMLKPLKPSDVKKLTGHLI 152
F LKP++ +D+ KL H++
Sbjct: 128 EFFLKPVRLADLNKLKPHMM 147
>sp|O80365|ARR8_ARATH Two-component response regulator ARR8 OS=Arabidopsis thaliana
GN=ARR8 PE=1 SV=1
Length = 225
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 106/137 (77%), Gaps = 5/137 (3%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSN-----G 76
HVLAVDDS+ DRK++E LL+ S+C+VTT ++G +ALEFLGL + N L+++
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69
Query: 77 TKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFML 136
++NL+ITDYCMPGMTGY+LLKK+KES+ + +PVV++SSEN+P RI+ CLEEGA+ F L
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129
Query: 137 KPLKPSDVKKLTGHLIN 153
KP+K +D+ KL H++
Sbjct: 130 KPVKLADLTKLKPHMMK 146
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 104/126 (82%), Gaps = 3/126 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDSIVDRK++E LL+ S+CKVTT E+G RAL++LGL D + +NL KVNL
Sbjct: 25 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL-DGGKGASNLKD--LKVNL 81
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG++GY+LLKKIKESS +EVPVV++SSENI RI ECL+EGA+ F+LKP+K
Sbjct: 82 IVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKL 141
Query: 142 SDVKKL 147
+DVK++
Sbjct: 142 ADVKRI 147
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 101/126 (80%), Gaps = 3/126 (2%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
HVLAVDDS VDRK++E LLK SACKVTT E+G RAL++LGL D + L KVNL
Sbjct: 19 HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL-DGDNGSSGLKD--LKVNL 75
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TDY MPG+TGYELLKKIKESS ++E+PVV++SSENI RI +C+ EGA+ F+LKP+K
Sbjct: 76 IVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKL 135
Query: 142 SDVKKL 147
+DVK+L
Sbjct: 136 ADVKRL 141
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 10 SSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQ 69
S S +P +L DD V RKI+ NLLK VT NG A E++
Sbjct: 149 SDFSDEYSPSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYI--------- 199
Query: 70 NNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRI-NECLE 128
N K +LV+TD MP +TG++LL++I + V + +PV+++S + + N+ ++
Sbjct: 200 ---NKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIK 256
Query: 129 EGAQMFMLKPLKPSDVKK 146
G Q F+ KP+ +KK
Sbjct: 257 IGGQDFLTKPIAKELLKK 274
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 111
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 112 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 172 ELKNLWQHVW 181
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VD R++V LL++ +V AENG +A +L ++ QN+ ++LV
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-----EDMQNS-------IDLV 111
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MPG++G LL +I ++ K +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 112 LTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 172 ELKNLWQHVW 181
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R++V LL+ +V AENG+ A + L ++ QN+ ++LV
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----EDLQNH-------IDLV 130
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + K++PV+++SS + + +CL +GA F++KP++ +
Sbjct: 131 LTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKN 190
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 191 ELKNLWQHVW 200
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD KI+E+LL++ VTT +ALE L N K +LV
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALEL------------LRENKNKFDLV 66
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++S+ + P + + + GA ++LKP++
Sbjct: 67 ISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIE 123
Query: 143 DVKKLTGHLI 152
++K + H++
Sbjct: 124 ELKNIWQHVV 133
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ DDS R+I+ LL+ + +V +G++A E L E V+L+
Sbjct: 54 LVEADDST--RQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE------------SVDLI 99
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ +P ++GY LL I E + K +PV+++S+++ + +C+ +GA +++KPL+ +
Sbjct: 100 LTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRN 159
Query: 143 DVKKLTGHLI 152
+++ L H+
Sbjct: 160 ELRNLWQHVW 169
>sp|P71403|CHEY_HELPY Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=cheY PE=1 SV=2
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 49
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ S KE+P++++++E + L+ G +++KP
Sbjct: 50 -LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 108
Query: 141 PSDVKK 146
P +K+
Sbjct: 109 PQVLKE 114
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 6 VASSSSSSSSSNPK-PPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVD 64
VA+ SS + P+ P VL + R I+ LL+ +V A +G++A + L
Sbjct: 27 VAAGSSRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDIL---- 82
Query: 65 EQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRIN 124
++ + N ++LV+T+ +P M+G+ LL I E K +PV+++SS + + +
Sbjct: 83 ---KEKSFN-----IDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVF 134
Query: 125 ECLEEGAQMFMLKPLKPSDVKKLTGHLI 152
+C+ +GA F++KP++ ++++ L H+
Sbjct: 135 KCMLKGAADFLVKPIRKNELRNLWQHVW 162
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VLAVDD +I++ LL+ VTT ALE L N K +LV
Sbjct: 19 VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELL------------RENKNKFDLV 66
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++S+ + P + + ++ GA ++LKP++
Sbjct: 67 ISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIE 123
Query: 143 DVKKLTGHLI 152
++K + H++
Sbjct: 124 ELKNIWQHVV 133
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 16/125 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
V+ VDD V I+ +L++S +V ++ +AL L + Q++N ++L+
Sbjct: 18 VMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKI-----QRDN-------IDLI 65
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
ITDY MPGM G +L K+I + +PV+V+SS+ + E L GA F+ KP+ P+
Sbjct: 66 ITDYYMPGMNGLQLKKQITQE--FGNLPVLVMSSDT--NKEEESLSCGAMGFIPKPIHPT 121
Query: 143 DVKKL 147
D+ K+
Sbjct: 122 DLTKI 126
>sp|Q9FAD7|CHEY_ENTCL Chemotaxis protein CheY OS=Enterobacter cloacae GN=cheY PE=3 SV=3
Length = 129
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ + M +PV++V++E I + GA +++K
Sbjct: 51 -FGFVISDWNMPNMDGLELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPSDVKKLTGHLI 152
P + +++ G +
Sbjct: 110 PFTAATLEEKLGKIF 124
>sp|P0A2D5|CHEY_SALTY Chemotaxis protein CheY OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cheY PE=1 SV=2
Length = 129
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+I+D+ MP M G ELLK I+ S M +PV++V++E I + GA +++K
Sbjct: 51 -FGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|P0A2D6|CHEY_SALTI Chemotaxis protein CheY OS=Salmonella typhi GN=cheY PE=3 SV=2
Length = 129
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+I+D+ MP M G ELLK I+ S M +PV++V++E I + GA +++K
Sbjct: 51 -FGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R IV LL+N + +V A NG++A + L E NN +++V
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL------EDLNN------HIDIV 127
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP ++G LL KI + +PV+++SS + + +CL +GA F++KP++ +
Sbjct: 128 LTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKN 187
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 188 ELKILWQHVW 197
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
VL V+ R+I+ LL+ KV +G+ A E L +E+ +N ++L
Sbjct: 38 RVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-----KEKSHN-------IDL 85
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++T+ +P ++G+ LL + E K +PV+++SS++ + +C+ GA +++KP++
Sbjct: 86 ILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRK 145
Query: 142 SDVKKLTGHLIN 153
+++K L H+
Sbjct: 146 NELKNLWQHVWR 157
>sp|Q8FGP6|CHEY_ECOL6 Chemotaxis protein CheY OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=cheY PE=3 SV=3
Length = 129
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ M +PV++V++E I + GA +++K
Sbjct: 51 -YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|Q9ZM64|CHEY_HELPJ Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain J99)
GN=cheY PE=3 SV=1
Length = 124
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNG-TKVN 80
+L VDDS R+I++N L + V AE+G+ A E L++N TKV
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWE------------KLDANADTKV- 49
Query: 81 LVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLK 140
+ITD+ MP M G +L+KK++ + KE+P++++++E + L+ G +++KP
Sbjct: 50 -LITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFT 108
Query: 141 PSDVKK 146
P +K+
Sbjct: 109 PQVLKE 114
>sp|P0AE69|CHEY_SHIFL Chemotaxis protein CheY OS=Shigella flexneri GN=cheY PE=3 SV=2
Length = 129
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ M +PV++V++E I + GA +++K
Sbjct: 51 -YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|P0AE67|CHEY_ECOLI Chemotaxis protein CheY OS=Escherichia coli (strain K12) GN=cheY
PE=1 SV=2
Length = 129
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ M +PV++V++E I + GA +++K
Sbjct: 51 -YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|P0AE68|CHEY_ECO57 Chemotaxis protein CheY OS=Escherichia coli O157:H7 GN=cheY PE=3
SV=2
Length = 129
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLQAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
VI+D+ MP M G ELLK I+ M +PV++V++E I + GA +++K
Sbjct: 51 -YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|Q51455|CHEY_PSEAE Chemotaxis protein CheY OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cheY PE=1
SV=1
Length = 124
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 15/125 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTT-AENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDD R+I++NLL++ T A++G AL L + +
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPML--------------HSGNFDF 48
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
++TD+ MPGMTG +LL+ ++ +K +PV++V++E +I E + G +++KP
Sbjct: 49 LVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKPFTA 108
Query: 142 SDVKK 146
+K+
Sbjct: 109 QVLKE 113
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL V++ R IV LLKN + +VT + + A L E E+ + ++LV
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL----EDEK--------SCIDLV 113
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
+T+ MP +G LL KI +K +PV+++SS + + +CL GA F++KP++ +
Sbjct: 114 LTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKN 173
Query: 143 DVKKLTGHLI 152
++K L H+
Sbjct: 174 ELKNLWQHVW 183
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 1 MDACGVASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAEN 52
+DA SS+ + SNP H +L DD +R +++ LL+ + KV
Sbjct: 434 VDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNG 493
Query: 53 GMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVP 110
+ L+ + D + VI D MPGM G ++LK+++ ++S M+ P
Sbjct: 494 AEQVLDAMAEED--------------YDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTP 539
Query: 111 VVVVSSENIPTRINECLEEGAQMFMLKPL 139
VVV+S++ P I C + GA+ F+ KP+
Sbjct: 540 VVVLSADVTPEAIRACEQAGARAFLAKPV 568
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 1 MDACGVASSSSSSSSSNPKPPH--------VLAVDDSIVDRKIVENLLKNSACKVTTAEN 52
+DA SS+ + SNP H +L DD +R +++ LL+ + KV
Sbjct: 434 VDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNG 493
Query: 53 GMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIK--ESSVMKEVP 110
+ L+ + D + VI D MPGM G ++LK+++ ++S M+ P
Sbjct: 494 AEQVLDAMAEED--------------YDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTP 539
Query: 111 VVVVSSENIPTRINECLEEGAQMFMLKPL 139
VVV+S++ P I C + GA+ F+ KP+
Sbjct: 540 VVVLSADVTPEAIRACEQAGARAFLAKPV 568
>sp|A1W0A5|CHEY_CAMJJ Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:23/36 (strain 81-176) GN=cheY PE=3
SV=1
Length = 130
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L V AE+G+ A + L + V +
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-------------TKNEDVKV 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ +++P+++V++E + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>sp|P0C635|CHEY_CAMJE Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:2 (strain NCTC 11168) GN=cheY PE=3
SV=1
Length = 130
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L V AE+G+ A + L + V +
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-------------TKNEDVKV 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ +++P+++V++E + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>sp|A8FMH1|CHEY_CAMJ8 Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=cheY
PE=3 SV=1
Length = 130
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNL 81
+L VDDS R+I++N L V AE+G+ A + L + V +
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-------------TKNEDVKV 49
Query: 82 VITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKP 141
+ITD+ MP M G EL+KK++ +++P+++V++E + L+ G +++KP P
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTP 109
Query: 142 SDVKK 146
+K+
Sbjct: 110 QVLKE 114
>sp|Q8D0P1|CHEY_YERPE Chemotaxis protein CheY OS=Yersinia pestis GN=cheY PE=3 SV=3
Length = 129
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KNLRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDAL------------NKLRAGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+ V++D+ MP M G +LLK I+ + +PV++V++E I + GA +++K
Sbjct: 51 -FDFVVSDWNMPNMDGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|Q93P00|CHEY_YEREN Chemotaxis protein CheY OS=Yersinia enterocolitica GN=cheY PE=3
SV=3
Length = 129
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 19 KPPHVLAVDDSIVDRKIVENLLKNSACK-VTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
K L VDD R+IV NLLK V AE+G+ AL N L + G
Sbjct: 4 KNLRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDAL------------NKLRTGG- 50
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
+ V++D+ MP M G +LLK I+ + +PV++V++E I + GA +++K
Sbjct: 51 -FDFVVSDWNMPNMDGLDLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 138 PLKPS 142
P +
Sbjct: 110 PFTAA 114
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 15/131 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL VDD KI+E +LK + +VTT AL L +E+++ ++V
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL-----RERKDG-------YDIV 60
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP M G++LL+ + + ++PV+++S + +R+ + ++ GA ++LKP++
Sbjct: 61 ISDVNMPDMDGFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 117
Query: 143 DVKKLTGHLIN 153
++K + H++
Sbjct: 118 ELKIIWQHVLR 128
>sp|Q55169|RCP1_SYNY3 Response regulator rcp1 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rcp1 PE=1 SV=1
Length = 147
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 13 SSSSNPKPPHVLAVDDSIVDRKIVENLLKNSAC--KVTTAENGMRALEFLGLVDEQEQQN 70
S SNP P +L V+DS D ++V+ +LK S ++ +G+ A+ FL QQ
Sbjct: 2 SDESNP-PKVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFL-------QQQ 53
Query: 71 NLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSEN 118
N + NL++ D +P G E+L +IK++ +K +PVVV+++ +
Sbjct: 54 GEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 19/129 (14%)
Query: 22 HVLAVDDSIVDRKIVENLLKNSACK---VTTAENGMRALEFLGLVDEQEQQNNLNSNGTK 78
+V+ VDD+ V I +L+ S + V + +AL L + Q++N
Sbjct: 17 NVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTL-----KNQRDN------- 64
Query: 79 VNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKP 138
++L+ITDY MPGM G +L K+I + + V+V+SS+ P + E L GA F+ KP
Sbjct: 65 IDLIITDYYMPGMNGLQLKKQITQE--FGNLSVLVMSSD--PNKEEESLSCGAMGFIPKP 120
Query: 139 LKPSDVKKL 147
+ P+D+ K+
Sbjct: 121 IAPTDLPKI 129
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 18 PKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGT 77
P +L VDD I+E +L +VT AL L +E++++ +
Sbjct: 8 PSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL-----RERKDSFD---- 58
Query: 78 KVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLK 137
LV++D MPGM GY LL+++ + ++PV+++S + T + + GA +++K
Sbjct: 59 ---LVLSDVHMPGMNGYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIK 113
Query: 138 PLKPSDVKKLTGHLI 152
P++P ++K + H++
Sbjct: 114 PIRPEELKNIWQHVV 128
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2
SV=1
Length = 740
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL +DD+ V R + + LL + C+VTTA + EFL +V ++ + +V
Sbjct: 615 VLVMDDNGVSRSVTKGLLVHLGCEVTTAGS---IEEFLRVVSQEHK------------VV 659
Query: 83 ITDYCMPGMTGYELLKKIKESSVM-KEVPVVVVSSENIPTRINE-CLEEGAQMFMLKPLK 140
D C PG+ GYEL +I+E E P +VV + N E CL G +LKP+
Sbjct: 660 FMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVS 719
Query: 141 PSDVKKLTGHLI 152
++ + LI
Sbjct: 720 IDKMRSVLSELI 731
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1
Length = 740
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
VL +DD+ V R + + LL + C+VTTA + EFL +V ++ + +V
Sbjct: 615 VLVMDDNGVSRSVTKGLLVHLGCEVTTAGS---IEEFLRVVSQEHK------------VV 659
Query: 83 ITDYCMPGMTGYELLKKIKESSVM-KEVPVVVVSSENIPTRINE-CLEEGAQMFMLKPLK 140
D C PG+ GYEL +I+E E P +VV + N E CL G +LKP+
Sbjct: 660 FMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVS 719
Query: 141 PSDVKKLTGHLI 152
++ + LI
Sbjct: 720 IDKMRSVLSELI 731
>sp|Q1XDE4|YCF29_PORYE Probable transcriptional regulator ycf29 OS=Porphyra yezoensis
GN=ycf29 PE=3 SV=1
Length = 222
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
++ V++ IV K ++ L + V A NG+ AL Q N + L+
Sbjct: 5 LMLVENDIVLSKAIQEYLIDQGFNVYIANNGLEALNL-------AYQYNFD-------LI 50
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPS 142
I+D MP + GYELL K+K++ + ++PV+ ++++ + + + G ++ KP P+
Sbjct: 51 ISDIMMPLVNGYELLAKLKKNKALSKIPVIFLTAKGMTKDRIKGYDMGCYGYLSKPFDPN 110
Query: 143 DVKKLTGHLI 152
++ + +LI
Sbjct: 111 ELLSIINNLI 120
>sp|P46384|PILG_PSEAE Protein PilG OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 /
1C / PRS 101 / LMG 12228) GN=pilG PE=3 SV=1
Length = 135
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
V+ +DDS R+ E LLK C V TA +G AL + T N++
Sbjct: 10 VMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIA--------------DTHPNII 55
Query: 83 ITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
D MP + GY+ IK +S K PV+++SS++ + G+ ++ KP
Sbjct: 56 FVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPF 112
>sp|Q4UU85|RPFG_XANC8 Cyclic di-GMP phosphodiesterase response regulator RpfG
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=rpfG PE=1 SV=1
Length = 378
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 4 CGVASSSSSSSSSNPKPP--HVLAVDDSIVDRKIVENLLKNSACKVTTAENG--MRALEF 59
GV+S+ + S S +++ VDD + R ++ +++++ A ++ + G + AL +
Sbjct: 9 AGVSSAETWGSWSEKADLGLNIVIVDDQMSARTMLRHVIEDIAPELKVYDFGDPLDALSW 68
Query: 60 LGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVS-SEN 118
+V+L++ DY MPGM G E ++++ +++P+++++ +
Sbjct: 69 --------------CEAGRVDLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILITIVGD 114
Query: 119 IPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN 153
P R LE G F++KP++P +++ +L+
Sbjct: 115 EPIR-QAALEAGVIDFLVKPIRPRELRARCSNLLQ 148
>sp|Q54SK5|DHKM_DICDI Hybrid signal transduction histidine kinase M OS=Dictyostelium
discoideum GN=dhkM PE=3 SV=1
Length = 2388
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 23 VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLV 82
+L V+D++V+ KI +L+ +V ++NG A+E + + + +L+
Sbjct: 2263 ILLVEDNLVNAKIAMTVLRKHNFRVELSKNGQLAME------------RIKQSHSSFDLI 2310
Query: 83 ITDYCMP---GMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPL 139
+ D MP G+T +L +K + +K +P++ ++++ N CLE G FM KPL
Sbjct: 2311 LMDIHMPVMDGITCSKLTRKFETEHGLKHLPIIALTADATTGHKNLCLEAGCNEFMSKPL 2370
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,851,369
Number of Sequences: 539616
Number of extensions: 1991465
Number of successful extensions: 7192
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 297
Number of HSP's that attempted gapping in prelim test: 6851
Number of HSP's gapped (non-prelim): 467
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)