Citrus Sinensis ID: 042079

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN
cccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHcccccHHHHHccccccccccEEEEEcccccccHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHcccccccccccHHHHHHHHHHHcc
**********************VLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN
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MDACGVASSSSSSSSSNPKPPHVLAVDDSIVDRKIVENLLKNSACKVTTAENGMRALEFLGLVDEQEQQNNLNSNGTKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVVVSSENIPTRINECLEEGAQMFMLKPLKPSDVKKLTGHLIN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Two-component response regulator ARR17 Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.probableQ9FPR6

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LUF, chain A
Confidence level:very confident
Coverage over the Query: 19-62,76-151
View the alignment between query and template
View the model in PyMOL