BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042083
(494 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 275/523 (52%), Positives = 338/523 (64%), Gaps = 87/523 (16%)
Query: 1 MAWFFLEMKES-TIVSPSSQPNFLPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFF 59
M W F E+K + +SPSS LPQ PP + F+LN+K+SPSILLIIIIL+IIFF
Sbjct: 8 MKWVFPEIKTTQNFLSPSS----LPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFF 63
Query: 60 VSGLLHLLVRFLLRPTNRDPED-LDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKA 118
+SGLLHLLVRFLL P++RD ED DNVTALQGQLQQLFHLHD+GVDQSFIDTLPVF+YK+
Sbjct: 64 ISGLLHLLVRFLLTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKS 123
Query: 119 IIGLKN-PFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDF 177
IIGLKN PFDCAVCLCEFE EDKLRLLPKCSHAFHM+CIDTWLLSHSTCPLCR+SLL D
Sbjct: 124 IIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDL 183
Query: 178 SS-SNSCSPVVLVLESGSE-SSREIAGDRDN---LGRTNSVLRTSTHLGCRGSSEFGSSH 232
SS + S +LVLES S+ SSREI GDRD+ + + + +S HLG G+++ GS+
Sbjct: 184 SSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTR 243
Query: 233 IDYTHKSCEILPKEDVVTSPTAVLDSGEKVVP--VKLGKYRTVDGGESS-------SNNN 283
ID H + L E + S KVVP VKLGK+R +D GE + ++++
Sbjct: 244 IDSGHGD-QYLDGE--------LGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSS 294
Query: 284 IDARRCFSMGSFEYVMEENSLLQVTIRTPVKKQSSKKPSLPLTPGHRLAMSEC--DCESR 341
+D RRCFSMGS+EY+M+E + L+V + T KKQSSK L PGHR AMSEC D R
Sbjct: 295 LDERRCFSMGSYEYIMDEETTLKVHVST--KKQSSKNRGL---PGHRTAMSECGFDPTGR 349
Query: 342 REFNGFDTIKGIGSSFGANISAGKGNDIGRSKTDSFSISKIWLQGKKEKHNL---PEDPS 398
+F+G +++ + + N+ + +SFS+SKIWL+GKKEKH+ ED S
Sbjct: 350 LKFSGSGSMRIVEEAAEKNV----------VERESFSVSKIWLRGKKEKHSKVQGKEDSS 399
Query: 399 R------RAFSFRFPVNRNAAAVGDDRDLKSKNGNVGTRRTISEIGISRWEYGRSELGCD 452
RAFSFR RN E GC+
Sbjct: 400 LVSSSSGRAFSFRLSNQRNHPDA------------------------------MIESGCE 429
Query: 453 EENQSCSRSD-LQMKTPSFARRTLHWLMGRQNKVVHSSFTPNV 494
E+NQ C S+ L+ KTPSFARRT+ WL GRQNKVVHSS + NV
Sbjct: 430 EDNQKCENSESLETKTPSFARRTMLWLAGRQNKVVHSSSSTNV 472
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 321 bits (823), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 223/478 (46%), Positives = 282/478 (58%), Gaps = 109/478 (22%)
Query: 38 NLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPED-LDNVTALQGQLQQLF 96
NLN+K++P+ILLIIIIL+IIFF+SGLLH+LV+FLL P+ ED DNVTALQGQLQQLF
Sbjct: 34 NLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPSRESREDYFDNVTALQGQLQQLF 93
Query: 97 HLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMEC 155
+LHD+GVDQS IDTLPVF+YK+I+GLK +PFDC VCLCEFE EDKLRLLPKCSHAFH+EC
Sbjct: 94 NLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVEC 153
Query: 156 IDTWLLSHSTCPLCRASLLPDFSSSNSCSPVVLVLESGSESSREIAGDRDNLGRTNSVLR 215
IDTWLLSHSTCPLCR++LL FSS ++ S L++ +SSR++ VL
Sbjct: 154 IDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDMV----------PVLE 203
Query: 216 TSTHLGCRGSSEFGSSHIDYTHKSCEILPKEDVVTSPTAVLDS-GEKVVP--VKLGKYRT 272
+++ LG +++ S+ I KSC+ P +D EKVVP VKLGK+R
Sbjct: 204 SNSQLGYDVNNDSESTRIRSGRKSCD----------PDGDMDGLDEKVVPLEVKLGKFRN 253
Query: 273 VDG-GE---------SSSNNNIDARRCFSMGSFEYVMEENSLLQVTIRTPVKKQSSKKPS 322
+D GE S ++ N+D RRC SMGS+EY+M++ + L+V + T KK S K
Sbjct: 254 IDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST--KKLSGKD-- 309
Query: 323 LPLTPGHRLAMSECDCESRREFNGFD-TIKGIGSSFGANISAGKGNDIGRSKTDSFSISK 381
P HR MSEC GFD T+KGI S + +SFS+SK
Sbjct: 310 --RVPSHRTVMSEC---------GFDPTVKGIEKSV--------------VERESFSLSK 344
Query: 382 IWLQGKKEKHNLPE-----DPSRRAFSFRFPVNRNAAAVGDDRDLKSKNGNVGTRRTISE 436
IWL+GKKEK + S RFP +R + + LKS+N
Sbjct: 345 IWLRGKKEKQKGTSARDSDCSFVSSSSLRFPNHR----IPPEESLKSENS---------- 390
Query: 437 IGISRWEYGRSELGCDEENQSCSRSDLQMKTPSFARRTLHWLMGRQNKVVHSSFTPNV 494
L+ KTPSFARRT+HWL GRQNK+V S T NV
Sbjct: 391 ------------------------ESLETKTPSFARRTMHWLAGRQNKIVQPS-TSNV 423
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 226/436 (51%), Gaps = 124/436 (28%)
Query: 1 MAW--FFLEMKESTIVSPSSQPNFLPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIF 58
M+W F +E K+ P P F + P + N++SP++L +I+ILA++F
Sbjct: 1 MSWVRFTIEQKDGNFAYP---PPFY-KDPILSPPSPPPPSSGNRISPAVLFVIVILAVLF 56
Query: 59 FVSGLLHLLVRFLLRP--------TNRDPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDT 110
F+SGLLHLLVRFL++ +NR PE + ALQ QLQQLFHL+D+G+DQ+FID
Sbjct: 57 FISGLLHLLVRFLIKHPSATASSRSNRFPE-ISTSDALQRQLQQLFHLNDSGLDQAFIDA 115
Query: 111 LPVFYYKAIIGL----------KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 160
LPVF+YK I+G + PFDCAVCLCEF +DKLRLLP CSHAFH+ CIDTWL
Sbjct: 116 LPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWL 175
Query: 161 LSHSTCPLCRASLL-PDFSSSNSCSPVVLVLESGSESSREIAGDRDNLGRTNSVLRTSTH 219
S+STCPLCR +L P FS N P+ D D++
Sbjct: 176 QSNSTCPLCRGTLFSPGFSMEN---PMF---------------DFDDIREDE-------- 209
Query: 220 LGCRGSSEFGSSHIDYTHKSCEILPKEDVVTSPTAVLDSGEKVVPVKLGKYRTVD----- 274
G +E GS K+ EI +E VV + V+PV+LGK++ +D
Sbjct: 210 ---EGVTENGS------QKTMEI--QEIVVE---------KGVLPVRLGKFKRLDNVGNG 249
Query: 275 -------GGESSSNNNIDARRCFSMGSFEYVMEENSLLQVTI---RTPVKKQSSKKPSLP 324
GGE+SS +N+DARRCFSMGS++Y++ NS L+V R P K K+
Sbjct: 250 QGQDVVAGGETSS-SNLDARRCFSMGSYQYIL-GNSELKVPFANDRLPRLKPQDKE---- 303
Query: 325 LTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGANISAGKGNDIGRSKTDSFSISKIWL 384
SE S E N K N + +K +SFS+SKIWL
Sbjct: 304 ---------SEQTGNSSSEDN------------------KKINTV--AKGESFSVSKIWL 334
Query: 385 QGKKEKHNLPEDPSRR 400
KK+K + D RR
Sbjct: 335 WPKKDKFS--SDAQRR 348
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 20/158 (12%)
Query: 40 NNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP-----------TNRDPEDLDNVTAL 88
NN++SP IL II++L++IFF+ +LHLLVR+ L+ +N++PE D+ T
Sbjct: 46 NNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDT-Y 104
Query: 89 QGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCS 148
Q QLQQLFHLHD+G+DQ+ ID LPVF YK I G K PFDCAVCLCEF +DKLRLLP CS
Sbjct: 105 QRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCS 164
Query: 149 HAFHMECIDTWLLSHSTCPLCRASLL--------PDFS 178
HAFH++CIDTWLLS+STCPLCR +L PDF+
Sbjct: 165 HAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPDFN 202
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 52/140 (37%)
Query: 259 GEKVVPVKLGKYRTVD----------GGESSSNNNIDARRCFSMGSFEYVMEENSLLQVT 308
G++V V+LGK+R+ + GG +S++++D RRCFSMGS++Y++ E+ L+
Sbjct: 229 GKRVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLV--- 285
Query: 309 IRTPVKKQSSKKPSLPLTPGHRLAMSECDCESRREFNGFDTIKGIGSSFGANISAGKGND 368
+ L P + + D E G I+
Sbjct: 286 --------------VALCPNNEGLKNNKDVE------------------GKKINM----- 308
Query: 369 IGRSKTDSFSISKIWLQGKK 388
RSK +SFS+SKIW K
Sbjct: 309 --RSKGESFSVSKIWQWSNK 326
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Query: 37 FNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVT----ALQGQL 92
F+L +SP +LL I +L+IIFFV+ L+HLLV+FL RP R + D +T ALQG+
Sbjct: 26 FDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRY 85
Query: 93 QQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPF-DCAVCLCEFEPEDKLRLLPKCSHAF 151
Q F+LHDA +DQSFID LP+ +YK +IGL++ DCAVCL EF ED+LRLLPKCSHAF
Sbjct: 86 QTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAF 145
Query: 152 HMECIDTWLLSHSTCPLCRASLLPDFSSSN-SCSPVVLVLESGSESSRE 199
H+ECIDTWLL++STCPLCR +LL + S S +VLV ES ++S++
Sbjct: 146 HVECIDTWLLTNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQD 194
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 127/263 (48%), Gaps = 67/263 (25%)
Query: 49 LIIIILAIIFFVSGLLHLLVRFLLRPTNRDP-----EDLDNVTALQGQLQQLFHLHDAGV 103
L+I LA+I G+L+L+ +FL + + P + D + QLQ LF LHD+G+
Sbjct: 122 LVISGLALIIVFLGVLYLIFKFLRKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFLHDSGL 181
Query: 104 DQSFIDTLPVFYYKAI-IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 162
DQ+ ID LPVF Y + I L+ PFDCAVCL EF DKLRLLP CSHAFH+ CIDTWLLS
Sbjct: 182 DQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLS 241
Query: 163 HSTCPLCRASLLPDFSSSNSCSPVVLVLESGSESSREIAGDRDNLGRTNSVLRTSTHLGC 222
+STCPLCR SL S+SN C
Sbjct: 242 NSTCPLCRRSL----STSNVC--------------------------------------- 258
Query: 223 RGSSEFGSSHIDYTHKSCEILPKEDVVTSPTAVLDSGEKVVPVKLGKYRTVDGGESSSNN 282
Y H + P ++V V+LG++++ + +S ++
Sbjct: 259 ------------YNHSETLVAPLSGHQQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHD 306
Query: 283 NIDA------RRCFSMGSFEYVM 299
D RRC+SMG+ +Y++
Sbjct: 307 VKDEIGVRMPRRCYSMGTQQYLV 329
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 61/77 (79%)
Query: 100 DAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 159
++G+D+S I++LPVF + A+ G K+ +CAVCL FEP + LRLLPKC HAFH+EC+DTW
Sbjct: 118 NSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTW 177
Query: 160 LLSHSTCPLCRASLLPD 176
L +HSTCPLCR + P+
Sbjct: 178 LDAHSTCPLCRYRVDPE 194
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 78/141 (55%), Gaps = 14/141 (9%)
Query: 42 KVSPSILLIIIILAIIFFVSGLLHLLVRFLL-RPTNRD---PEDLDNVTALQGQLQQLFH 97
+ P++ +++I+L +FF G + +R L R D P D N A Q +
Sbjct: 58 RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQAR--- 114
Query: 98 LHDAGVDQSFIDTLPVFYYKAIIGL---KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHME 154
G+D S I+T P F Y + L K +C+VCL EFE ++ LRL+PKC H FH
Sbjct: 115 ----GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPG 170
Query: 155 CIDTWLLSHSTCPLCRASLLP 175
CID WL SH+TCPLCRA L+P
Sbjct: 171 CIDAWLRSHTTCPLCRADLIP 191
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 18/190 (9%)
Query: 26 PPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRF----LLRPTNRDPED 81
PPP+ +D F PS+ +I + +I+F ++ +L + + L T+ D E
Sbjct: 26 PPPNLYATSDLFK------PSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGER 79
Query: 82 LDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKL 141
+ + QG + +G+D+ I++LP F + A+ GLK +C+VCL +FE + L
Sbjct: 80 IRHDRLWQGLFNRSSRF--SGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEIL 137
Query: 142 RLLPKCSHAFHMECIDTWLLSHSTCPLC--RASLLPDFSSSNSCSPVVLVL---ESGSES 196
RLLPKC HAFH+ CID WL H+TCPLC R ++ D S + S + +L E+ E
Sbjct: 138 RLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREED 197
Query: 197 SR-EIAGDRD 205
SR EI +R+
Sbjct: 198 SRLEIYIERE 207
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
Query: 3 WFFLEMKESTIVSPSSQPNFLPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSG 62
W L + I S ++ +F P PP +L +PS + +L +FF++G
Sbjct: 13 WIILHVA-IIIQSKANAQSFSPSPP----------DLQTGHTPSKTTVFAVLVTLFFLTG 61
Query: 63 LLHLLVRFLLRPTNRDPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAI--- 119
LL + +R R A G ++ G+D + +++ PVF Y ++
Sbjct: 62 LLSVYIRHCARSNPDSSTRYFRNRANDGSSRR------GGLDNAVVESFPVFAYSSVKES 115
Query: 120 -IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 173
IG K+ +CA+CL E E + +RLLP C+H FH++CIDTWL SH+TCP+CR++L
Sbjct: 116 KIGSKD-LECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 46 SILLIIIILAIIFFVSGLLHLLVRFLLRPTNR------DPEDLDNVTALQGQLQ---QLF 96
+I +I I A++ + L+ +F NR ++ DN T ++ + Q Q+
Sbjct: 82 AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141
Query: 97 H----LHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFH 152
H + G+ QS I+++ + YK GL DC VCL EFE ++ LRLLPKC+HAFH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201
Query: 153 MECIDTWLLSHSTCPLCRASL 173
+ CIDTWL SH+ CPLCRA +
Sbjct: 202 ISCIDTWLSSHTNCPLCRAGI 222
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 44 SPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVTALQGQLQQLFHLHDAGV 103
SP+ +I+I+L +FF G + + +R L+ +D+ G + + G+
Sbjct: 36 SPTTAIIMIVLVSVFFALGCISVYMRRCLQ----HALGMDSGGG-PGNWLNVRQTTEPGL 90
Query: 104 DQSFIDTLPVFYYKAIIGL---KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 160
D S I+T P F Y + L K +C VCL EFE ++ LRL+P+C H FH CID WL
Sbjct: 91 DASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWL 150
Query: 161 LSHSTCPLCRASLLPDFSSSNSCSPVVLVLESGSESSR 198
S +TCPLCRA+L+P S S L E+G S R
Sbjct: 151 RSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLR 188
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 4 FFLEMKESTIVSPSSQPNFLPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGL 63
F L + + + + SQP P+ Q N G ++SP++ +I++IL F G
Sbjct: 17 FLLILSSADLAASQSQPG------PTNQPYNYG-----RLSPAMAVIVVILIAALFFMGF 65
Query: 64 LHLLVRFLLRPTNRDPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAI---- 119
+ R D A + + + G+D S ++T P F Y +
Sbjct: 66 FSIYFRHC-----SGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQK 120
Query: 120 IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSS 179
+G K +CA+CL EFE ++ LRLLPKC H FH CID WL +H TCP+CRA+L +
Sbjct: 121 LG-KGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAE 179
Query: 180 SNSCSP 185
S P
Sbjct: 180 GESVEP 185
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 21 NFLPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPE 80
NF P P Q +NDG N +SP ++ I I A F ++ L+ ++ T +
Sbjct: 36 NFSPPPISYEQFLNDGVASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAA 95
Query: 81 D--------LDNVTALQGQLQQLFHLHD--AGVDQSFIDTLPVFYYKAII-GLK-NPFDC 128
LD + +G F L AG+D + I + F K G K N DC
Sbjct: 96 SESGRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDC 155
Query: 129 AVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 174
++CL EF ++ LRLLPKC+H FH+ CID WL SHS CPLCRA ++
Sbjct: 156 SICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 201
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 20/141 (14%)
Query: 45 PSILLIIIILAIIFF-VSGLLHLL---VRF----LLRPTNRDPEDLDNVTALQGQLQQLF 96
P +++I ++ +IFF V G + +F + R T+ D E Q+ ++
Sbjct: 50 PVVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAE---------SQVVRIR 100
Query: 97 HLHDAGVDQSFIDTLPVFYY---KAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHM 153
L G+D I+T P F Y KA+ K +CAVCLCEFE ++ LRL+P C H FH
Sbjct: 101 RLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHA 160
Query: 154 ECIDTWLLSHSTCPLCRASLL 174
+C+D WL HSTCPLCRA L+
Sbjct: 161 DCVDVWLSEHSTCPLCRADLV 181
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 52 IILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVTALQGQLQQLFHLHDA-GVDQSFIDT 110
+I+A++ F L + TN P + T G + F + G+ + I++
Sbjct: 48 VIIAMLMFTLLFSMLACCVCYKYTNTSPHGTSSDTEEGGHGEVAFTRRTSRGLGKDVINS 107
Query: 111 LPVFYYKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCP 167
P F Y + GLK +CA+CL EFE E+ LRL+P CSHAFH CID WL S STCP
Sbjct: 108 FPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCP 167
Query: 168 LCRASLLPD-FSSSNSCSPVV 187
+CRASL P S NS P +
Sbjct: 168 VCRASLPPKPGSDQNSLYPFI 188
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 53/70 (75%)
Query: 102 GVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 161
G+++S I ++ V+ YK+ G + DC+VCL EFE + LRLLPKC+HAFH+ CIDTWL
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
Query: 162 SHSTCPLCRA 171
SHS CPLCRA
Sbjct: 176 SHSNCPLCRA 185
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 27/146 (18%)
Query: 42 KVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP----------TNRDPEDLDNVTALQGQ 91
K S LL+I I+ F+ GL + R+ R T+ D E ++TA++G
Sbjct: 9 KASDLTLLVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRG- 67
Query: 92 LQQLFHLHDAGVDQSFIDTLPVFYYKAI----IGLKNPFDCAVCLCEFEPEDKLRLLPKC 147
+D++ I++ P F Y + IG+ +CAVC+CEFE + LRL+P+C
Sbjct: 68 -----------LDEAIINSFPTFLYSEVKERRIGIGG-VECAVCICEFEDHETLRLMPEC 115
Query: 148 SHAFHMECIDTWLLSHSTCPLCRASL 173
H FH +C+ WL HSTCPLCR L
Sbjct: 116 CHVFHADCVSVWLSDHSTCPLCRVDL 141
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%)
Query: 101 AGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 160
+G+D++ I++LP+F + A+ G K DC+VCL +FE + LRLLPKC HAFH+ CID WL
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 161 LSHSTCPLCR 170
H+TCPLCR
Sbjct: 156 EQHATCPLCR 165
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 26 PPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLR-----------P 74
PPPS ++ + ++ SP ++ +I ILA F + L+ ++ R
Sbjct: 39 PPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAA 98
Query: 75 TNRDPEDLD-------NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPFD 127
NR D N Q + G+D+S I ++ V+ Y+ + G D
Sbjct: 99 INRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSD 158
Query: 128 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 174
C+VCL EF+ + LRLLPKC+HAFH+ CIDTWL SHS CPLCRA ++
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIV 205
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 92 LQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAF 151
++ + G+ +S I+++ V +K G+ + +C+VCL EFE ++ LRLLPKCSHAF
Sbjct: 99 FHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAF 158
Query: 152 HMECIDTWLLSHSTCPLCRASLL 174
H+ CIDTWLLSH CPLCRA +L
Sbjct: 159 HLNCIDTWLLSHKNCPLCRAPVL 181
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 29 SPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVTAL 88
S + + G+ LN K+ S ++++ + I+ H R+L R NR
Sbjct: 14 SVSHTSSGYALNGKIMLSSVIVLFVAVIMILC---FHSYARWLFRRHNRRIRRRIRSHLR 70
Query: 89 QGQLQQLFHLHDAGVDQSFIDTLPVFYY--KAIIGLKNPFDCAVCLCEFEPEDKLRLLPK 146
D +DQ+ +D +P+F Y K + +C+VCL EFE ED+ RLLPK
Sbjct: 71 TLSASP----RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPK 126
Query: 147 CSHAFHMECIDTWLLSHSTCPLCRASLLPDF 177
C H+FH++CIDTW S STCPLCRA + P F
Sbjct: 127 CGHSFHVDCIDTWFRSRSTCPLCRAPVQPPF 157
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 106 SFIDTLPVFYYKAII---GLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 162
S +D+LP+F + ++ N DCAVCL +FEPED+LRLLP C HAFH +CID WL+S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 163 HSTCPLCRASLL 174
+ TCPLCR+ L
Sbjct: 152 NQTCPLCRSPLF 163
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 101 AGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 160
+G+D++ I+ + V Y+ G + DC+VCL EF + LRLLP+CSHAFH +CIDTWL
Sbjct: 130 SGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWL 189
Query: 161 LSHSTCPLCRASL 173
SHS CPLCRA++
Sbjct: 190 KSHSNCPLCRANI 202
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 27 PPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVT 86
P +P +D + + +SP++ ++++++ F G + +R + +VT
Sbjct: 25 PGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVD------GSVT 78
Query: 87 ALQGQLQQLFHLHDA-GVDQSFIDTLPVFYYKAI----IGLKNPFDCAVCLCEFEPEDKL 141
G +++ + A G+D I+T P F Y + IG K +CA+CL EFE ++ L
Sbjct: 79 PAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIG-KGALECAICLNEFEDDETL 137
Query: 142 RLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 173
RLLPKC H FH CI WL H TCP+CR +L
Sbjct: 138 RLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 102 GVDQSFIDTLPVFYYKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 158
G+D+ I++ P F Y + K +CA+CLCEFE E+ LR +P CSH FH CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 159 WLLSHSTCPLCRASL 173
WL S STCP+CRA+L
Sbjct: 151 WLSSRSTCPVCRANL 165
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 31 QNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVTALQG 90
Q ++ + N K + +I I+ + F+S L ++ FL + R ++
Sbjct: 32 QQESESVDRNRKTNFPTETVIAIIVLAIFIS--LSMVACFLHKTFYR--------AEVEA 81
Query: 91 QLQQLFHLHDA-GVDQSFIDTLPVFYYKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPK 146
Q++FH G+++ +++ P+F Y + GLK +CA+CL EF ++ LR +P
Sbjct: 82 ASQEVFHSRARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPP 141
Query: 147 CSHAFHMECIDTWLLSHSTCPLCRASL 173
CSH FH CID WL S STCP CRA+L
Sbjct: 142 CSHTFHANCIDVWLSSQSTCPACRANL 168
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 10/159 (6%)
Query: 19 QPNFLPQPPPSPQN-VNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNR 77
Q N P P+ +ND + N V I+L ++ A+I +S L+ +R +LR T R
Sbjct: 9 QANAPANANPKPKGGINDTYFDTNMV---IILAALLCALICALS--LNSALRCVLRITRR 63
Query: 78 DPEDLDNVTALQGQLQQLFHLHDA-GVDQSFIDTLPV-FYYKAIIGLKNPFDCAVCLCEF 135
D D V+ L L A G+ + + +PV Y II +K +C +CL +F
Sbjct: 64 FTSD-DQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMK-ATECLICLGDF 121
Query: 136 EPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 174
E +K+R+LPKC+H FH+ CIDTWLLS S+CP CR SLL
Sbjct: 122 EDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 76/182 (41%), Gaps = 33/182 (18%)
Query: 42 KVSPSILLIIIILAIIFFVSGLLHLLVRFLLRP-----------------------TNRD 78
+ SP ++ ++++LA F L+ R L P +
Sbjct: 37 EFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPLFRRFRRWRCRRRRLLHLSSASSASTS 96
Query: 79 PEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPF----------DC 128
DL + + G+D S I TLP+F Y A P DC
Sbjct: 97 SSDLRSFSPFPFDSFHYSSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDC 156
Query: 129 AVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNSCSPVVL 188
AVCL EFE D +R LP C HAFH+ECID WL SH CPLCR ++L SP V
Sbjct: 157 AVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVP 216
Query: 189 VL 190
++
Sbjct: 217 LM 218
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 40 NNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLR---PTNRDPEDLDNVTALQGQLQQLF 96
+N IL I+ + V L+ LLV +++R TN D L L
Sbjct: 12 SNSTESQILKFTFIVCVPICVI-LIVLLVLYIMRRNSNTNVDWSSLGGFVPTNNNLST-- 68
Query: 97 HLHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECI 156
+ G+ + + LP+ YK + N C+VCL +++ E+KL+ +P C H FHMECI
Sbjct: 69 --AELGLSKDIREMLPIVIYKESFTV-NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECI 125
Query: 157 DTWLLSHSTCPLCRASLLP 175
D WL SH+TCPLCR SL+P
Sbjct: 126 DLWLTSHTTCPLCRLSLIP 144
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 10/140 (7%)
Query: 37 FNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVTALQGQLQQLF 96
++LN+K+ +L + L+ + + LHL RF+LR R E + + + F
Sbjct: 25 YDLNSKI---MLAAVASLSGVILIVFALHLYARFVLR---RRREAFRGLPVI---FRHPF 75
Query: 97 HLHDAGVDQSFIDTLPVFYYKAIIGLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMEC 155
+ G++ + I +LP F A G+ + +CAVCL + +DK R LP C H FH++C
Sbjct: 76 EMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDC 135
Query: 156 IDTWLLSHSTCPLCRASLLP 175
+DTWL + STCP+CR + P
Sbjct: 136 VDTWLTTCSTCPVCRTEVEP 155
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 102 GVDQSFIDTLPVFYYKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 158
G+++ I++ P F Y + GLK +CA+CL EFE ++ LR +P CSH FH CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 159 WLLSHSTCPLCRASL 173
WL S STCP+CRA+L
Sbjct: 154 WLSSWSTCPVCRANL 168
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 100 DAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 159
+ G+ + + LPV YK +K+ C+VCL +++ E+KL+ +P C H FHMECID W
Sbjct: 84 ELGLSKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 142
Query: 160 LLSHSTCPLCRASLLP 175
L SH+TCPLCR SL+P
Sbjct: 143 LTSHTTCPLCRLSLIP 158
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 97 HLHDAGVDQSFIDTLPVFYYKA--------------IIGLKNPFDCAVCLCEFEPEDKLR 142
L G+D+S I +P+F +K K +C+VCL EF+ E+KLR
Sbjct: 93 ELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLR 152
Query: 143 LLPKCSHAFHMECIDTWLLSHSTCPLCR------ASLLPDFSSSNSCSPVVLVLESGS-- 194
++P CSH FH++CID WL +++ CPLCR S PD S+ S SP LV+ G
Sbjct: 153 IIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGENE 212
Query: 195 ----ESSREIAGDRDN 206
E I DRD+
Sbjct: 213 YVVIELGSSIGSDRDS 228
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 31/189 (16%)
Query: 1 MAWFFLEMKESTIVSPSSQPNFLPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIF-- 58
MA F L + + +S + +P+ + D + N ++ ++IILA +
Sbjct: 1 MARFLLATQATPTISATDA---------NPRTLGDSVSNNKNIASMDTHMVIILAALLCA 51
Query: 59 FVSGL-LHLLVRFLLRPT-----NRDPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLP 112
+ L ++ ++R +LR T N DP D + A G+ + + +P
Sbjct: 52 LICALGINSVLRCVLRCTRRFTPNEDPVDTNANVA-------------KGIKKRALKVIP 98
Query: 113 VFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRAS 172
V Y + +K +C +CL +F + +R+LPKC+H FH++CIDTWLLSHS+CP CR S
Sbjct: 99 VDSYSPELKMK-ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQS 157
Query: 173 LLPDFSSSN 181
LL + +N
Sbjct: 158 LLEHQTPAN 166
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 98 LHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECID 157
LH+AG+D + ++ V +K K+ +CAVCL + DK R+LP+C+H FH++CID
Sbjct: 91 LHNAGLDSKILQSIHVVVFKCT-DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCID 149
Query: 158 TWLLSHSTCPLCRASL 173
W SHSTCPLCR ++
Sbjct: 150 MWFQSHSTCPLCRNTV 165
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 102 GVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 161
G+D + I +LPVF + K+P +CAVCL EFE + R+LP C H FH++CID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 162 SHSTCPLCRA 171
SHSTCPLCR+
Sbjct: 153 SHSTCPLCRS 162
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 100 DAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 159
+ G+ + + LP+ +K + + C+VCL +++P DKL+ +P C H FHM+CID W
Sbjct: 73 ELGLSKELREMLPIVVFKESFTVMDS-QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLW 131
Query: 160 LLSHSTCPLCRASLLPDFSSSNSCSPVVLVLESGSESSRE 199
L SH+TCPLCR +L+P S + PV ++ E S +
Sbjct: 132 LTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQ 171
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 32 NVNDG---FNLNNKV--SPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVT 86
N+N G ++LN K+ + I+L + ++ I+ F S L R R R L ++
Sbjct: 14 NMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLA 73
Query: 87 ALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPK 146
A + Q + +D + ++ +P+F Y +C+VCL EFE +D+ R+LPK
Sbjct: 74 AARDPTQSS--SSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPK 131
Query: 147 CSHAFHMECIDTWLLSHSTCPLCRASLLP 175
C H FH++CIDTW S S+CPLCRA + P
Sbjct: 132 CGHVFHVDCIDTWFRSRSSCPLCRAPVQP 160
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 98 LHDAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECID 157
L + G+ + +LP+ +++ K+ +C++CL E DK RLLPKC+H+FH+ECID
Sbjct: 98 LSNTGLTSFELSSLPIVFFRQD-SCKDGLECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 158 TWLLSHSTCPLCRASLL-PDFSSSNSCSPV 186
W SHSTCP+CR ++L P+ +SS V
Sbjct: 157 MWFQSHSTCPICRNTVLGPEQASSKRVEQV 186
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 24 PQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLD 83
P P PSP ++ F+ N +++++ +L S L+ ++R LR +N P +
Sbjct: 39 PTPAPSPYVGDNNFDAN------VVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSE-- 90
Query: 84 NVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGLKN-PFDCAVCLCEFEPEDKLR 142
G L + GV + + + Y + L +CA+CL EF E++++
Sbjct: 91 -----AGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVK 145
Query: 143 LLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNSCS 184
LLP C H FH+ CID WL SHS+CP CR L+ CS
Sbjct: 146 LLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCS 187
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 7/84 (8%)
Query: 97 HLHDAGVDQSFIDTLPVFYYK---AIIGL----KNPFDCAVCLCEFEPEDKLRLLPKCSH 149
H + G+D+S I +PVF +K + G KN +C+VCL EF+ ++KLR++P C H
Sbjct: 96 HEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 150 AFHMECIDTWLLSHSTCPLCRASL 173
FH++CID WL ++ CPLCR S+
Sbjct: 156 VFHIDCIDIWLQGNANCPLCRTSV 179
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 23 LPQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHL-----LVRFLLRPTNR 77
+P P QN + + P +++I+ ++ ++ F G + L N
Sbjct: 1 MPIAKPINQNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNH 60
Query: 78 DPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFYYKAIIGL---KNPFDCAVCLCE 134
+ +Q Q + + + G++ I + P+F + ++ L K +CA+CL E
Sbjct: 61 HYHNGLPENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLE 120
Query: 135 FEPED-KLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNSCSPVVLVLESG 193
FE E LRLL C H FH ECID WL S+ TCP+CR +L P+ + N ++ V++
Sbjct: 121 FEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPN-APENIKELIIEVIQEN 179
Query: 194 SESSREIAGDRDNLGRTNSVL 214
+ +R D++ +N V+
Sbjct: 180 AHENR----DQEQTSTSNEVM 196
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 101 AGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 160
G++ S I +LP+F + A+ L +C+VCL EF+ + R++P C H FH+ CID W
Sbjct: 50 GGLNPSIIKSLPIFTFSAVTALF-AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWF 108
Query: 161 LSHSTCPLCRASLLP 175
SHS+CPLCR+ + P
Sbjct: 109 HSHSSCPLCRSQIEP 123
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 103 VDQSFIDTLPVFYY---KAIIGLKN-PFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 158
+D+ ++ P Y KA + K+ P +CAVCL EF D+LR+LP C H FH +CID
Sbjct: 104 LDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDP 163
Query: 159 WLLSHSTCPLCRASL 173
WL + TCPLCRA+L
Sbjct: 164 WLAAAVTCPLCRANL 178
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 80.1 bits (196), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 102 GVDQSFIDTLPVFYYKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 158
G+D I + P F Y G++ +C VCL EF+ ++ LRL+P C H FH +C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 159 WLLSHSTCPLCRASLLP 175
WL STCP+CRA ++P
Sbjct: 116 WLSHSSTCPICRAKVVP 132
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 102 GVDQSFIDTLPVFYYKAIIGLKNPF---DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 158
G+D I +LP F ++G+KN +CAVCL E +D R+LP C H FH+ C+DT
Sbjct: 75 GLDSLVIASLPTF----VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDT 130
Query: 159 WLLSHSTCPLCRASLLP 175
WL + STCP+CR P
Sbjct: 131 WLTTQSTCPVCRTEAEP 147
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 24 PQPPPSPQNVNDGFNLNNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLD 83
PQPP + V+P + +I+ ++ ++FF G L T L
Sbjct: 11 PQPPQ-----------QHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLH 59
Query: 84 N--VTALQGQLQQLFHLH-DAGVDQSFIDTLPVFYYKAIIGL---KNPFDCAVCLCEFEP 137
+ T LQQ + G++ I++ P F Y ++ L K +CA+CL EF+
Sbjct: 60 HGGDTVSDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDG 119
Query: 138 EDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSSNSCSPVV--LVLESGSE 195
+ LRLL C H FH ECID W SH TCP+CR L P N+ P V ++++ E
Sbjct: 120 DHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPENT-KPTVDEMIIDVIQE 178
Query: 196 SSREIAGDRDNLGRTNSV 213
+S + D T +
Sbjct: 179 TSDDEEDDHHRQQTTTQI 196
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 46 SILLIIIILAIIFFVSGLLHL-LVRFLLRPTNRDPEDLDNVTALQGQ-LQQLFHL----H 99
+++L ++L +IF +G L L +FLL NR L LQ L H+
Sbjct: 24 TVVLTGVLLFVIF--AGFFSLFLWQFLL---NR----LFTTWNLQRTPYGDLIHVATPPE 74
Query: 100 DAGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 159
+ G+D I + PVF+Y + + +CA+CL EF ED +RL+ C H FH CID W
Sbjct: 75 NTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLW 134
Query: 160 LLSHSTCPLCRASLLP 175
H TCP+CR L P
Sbjct: 135 FELHKTCPVCRCELDP 150
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 101 AGVDQSFIDTLPVFYYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 160
AG+ + + PV Y + +CA+CL EF +++R+LP C+H+FHM CIDTWL
Sbjct: 78 AGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 161 LSHSTCPLCRASLL 174
+SHS+CP CR SL+
Sbjct: 138 VSHSSCPNCRHSLI 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,756,564
Number of Sequences: 539616
Number of extensions: 8340097
Number of successful extensions: 22257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 21710
Number of HSP's gapped (non-prelim): 514
length of query: 494
length of database: 191,569,459
effective HSP length: 122
effective length of query: 372
effective length of database: 125,736,307
effective search space: 46773906204
effective search space used: 46773906204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)