Query 042084
Match_columns 1124
No_of_seqs 427 out of 1661
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 02:42:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042084.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042084hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02248 cellulose synthase-li 100.0 0E+00 0E+00 2891.1 86.1 1113 1-1124 1-1135(1135)
2 PLN02400 cellulose synthase 100.0 5E-275 1E-279 2450.2 63.6 934 95-1113 4-1071(1085)
3 PLN02436 cellulose synthase A 100.0 1E-272 3E-277 2419.6 66.3 933 95-1113 4-1081(1094)
4 PLN02638 cellulose synthase A 100.0 2E-269 4E-274 2400.9 64.4 913 121-1113 8-1066(1079)
5 PLN02915 cellulose synthase A 100.0 4E-266 9E-271 2366.6 66.0 904 126-1113 11-1031(1044)
6 PLN02189 cellulose synthase 100.0 2E-264 5E-269 2350.9 65.3 933 95-1113 4-1027(1040)
7 PLN02195 cellulose synthase A 100.0 1E-259 3E-264 2299.8 67.6 893 127-1113 3-962 (977)
8 PF03552 Cellulose_synt: Cellu 100.0 5E-209 1E-213 1829.0 41.5 670 372-1113 1-713 (720)
9 PLN02190 cellulose synthase-li 100.0 5E-206 1E-210 1807.0 59.0 723 269-1103 7-754 (756)
10 PLN02893 Cellulose synthase-li 100.0 1E-197 3E-202 1742.9 63.5 713 268-1103 9-728 (734)
11 TIGR03030 CelA cellulose synth 100.0 1.5E-62 3.3E-67 599.7 50.8 493 288-1079 57-561 (713)
12 PRK11498 bcsA cellulose syntha 100.0 2.2E-62 4.8E-67 599.9 48.4 474 290-1079 189-674 (852)
13 PRK05454 glucosyltransferase M 100.0 2.1E-32 4.6E-37 332.2 51.5 220 588-920 193-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 3.2E-31 6.9E-36 288.7 25.1 182 587-874 67-253 (254)
15 COG1215 Glycosyltransferases, 100.0 2.3E-28 4.9E-33 279.6 29.1 165 601-878 121-290 (439)
16 PRK14583 hmsR N-glycosyltransf 100.0 1.7E-26 3.8E-31 268.9 38.1 172 589-878 132-306 (444)
17 PRK11204 N-glycosyltransferase 99.9 7.7E-25 1.7E-29 251.7 37.0 172 588-879 110-286 (420)
18 PF14569 zf-UDP: Zinc-binding 99.9 2.1E-28 4.6E-33 217.8 3.7 61 122-184 1-63 (80)
19 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 1.9E-24 4.1E-29 251.8 36.6 210 604-928 118-341 (439)
20 PRK14716 bacteriophage N4 adso 99.9 8.6E-24 1.9E-28 249.8 34.7 194 603-902 135-355 (504)
21 PRK11234 nfrB bacteriophage N4 99.9 3E-22 6.4E-27 245.2 30.3 171 603-877 132-334 (727)
22 cd06421 CESA_CelA_like CESA_Ce 99.9 2.6E-22 5.7E-27 209.2 21.7 171 589-876 60-234 (234)
23 cd06437 CESA_CaSu_A2 Cellulose 99.9 7.7E-22 1.7E-26 208.0 22.5 166 589-872 63-232 (232)
24 cd06427 CESA_like_2 CESA_like_ 99.9 5.5E-21 1.2E-25 203.5 22.0 162 604-878 71-236 (241)
25 cd06435 CESA_NdvC_like NdvC_li 99.9 1.9E-20 4.1E-25 196.9 22.9 173 589-878 58-234 (236)
26 PF13641 Glyco_tranf_2_3: Glyc 99.8 1.7E-21 3.8E-26 203.4 4.4 165 589-871 60-228 (228)
27 PRK15489 nfrB bacteriophage N4 99.8 1.5E-17 3.2E-22 202.6 33.1 169 604-876 141-341 (703)
28 TIGR03472 HpnI hopanoid biosyn 99.8 2.2E-17 4.7E-22 188.8 26.0 166 589-873 100-273 (373)
29 cd04190 Chitin_synth_C C-termi 99.8 2.1E-18 4.5E-23 185.5 13.7 164 620-874 72-243 (244)
30 COG2943 MdoH Membrane glycosyl 99.8 3.9E-15 8.4E-20 171.3 36.9 220 589-920 214-439 (736)
31 cd04192 GT_2_like_e Subfamily 99.7 1.6E-16 3.6E-21 164.5 20.1 157 603-871 68-229 (229)
32 cd02520 Glucosylceramide_synth 99.7 3.8E-16 8.2E-21 161.5 18.0 134 589-871 60-195 (196)
33 cd06434 GT2_HAS Hyaluronan syn 99.7 8.6E-16 1.9E-20 161.1 18.7 166 604-874 64-234 (235)
34 cd06439 CESA_like_1 CESA_like_ 99.7 3.4E-15 7.4E-20 158.6 21.5 153 604-874 96-250 (251)
35 PF13632 Glyco_trans_2_3: Glyc 99.7 1.3E-15 2.7E-20 156.5 16.1 137 624-872 1-143 (193)
36 TIGR03469 HonB hopene-associat 99.5 3.7E-12 7.9E-17 146.7 30.5 159 602-869 113-279 (384)
37 cd02525 Succinoglycan_BP_ExoA 99.5 3.7E-13 8E-18 141.3 19.1 54 823-878 180-233 (249)
38 cd06436 GlcNAc-1-P_transferase 99.4 1.6E-11 3.4E-16 127.3 16.3 103 604-710 65-177 (191)
39 cd06438 EpsO_like EpsO protein 99.3 4E-11 8.7E-16 122.7 14.6 101 604-709 63-168 (183)
40 PF14570 zf-RING_4: RING/Ubox 99.3 1.6E-12 3.5E-17 108.1 2.8 46 136-183 2-48 (48)
41 PF13506 Glyco_transf_21: Glyc 99.2 1.4E-10 3E-15 120.7 14.1 154 602-870 15-175 (175)
42 cd04184 GT2_RfbC_Mx_like Myxoc 99.1 1.9E-09 4.1E-14 110.5 15.2 93 604-710 70-163 (202)
43 cd04195 GT2_AmsE_like GT2_AmsE 99.1 4E-09 8.6E-14 108.3 16.6 68 589-668 57-124 (201)
44 cd06433 GT_2_WfgS_like WfgS an 98.8 7.3E-08 1.6E-12 97.3 15.6 95 604-710 62-156 (202)
45 cd04186 GT_2_like_c Subfamily 98.8 9.9E-08 2.1E-12 93.6 16.0 66 604-710 61-126 (166)
46 PF03142 Chitin_synth_2: Chiti 98.8 2.3E-06 5E-11 102.8 27.8 171 621-875 201-377 (527)
47 cd04196 GT_2_like_d Subfamily 98.8 1.6E-07 3.4E-12 96.7 15.6 109 589-710 56-166 (214)
48 cd02522 GT_2_like_a GT_2_like_ 98.7 4.4E-07 9.5E-12 94.4 17.8 41 604-649 59-99 (221)
49 cd02510 pp-GalNAc-T pp-GalNAc- 98.7 4E-07 8.6E-12 101.0 18.4 53 587-649 58-110 (299)
50 cd06420 GT2_Chondriotin_Pol_N 98.7 7.2E-07 1.6E-11 90.0 17.2 75 604-710 66-140 (182)
51 PLN02726 dolichyl-phosphate be 98.7 1.4E-06 3.1E-11 93.7 20.2 108 589-710 70-180 (243)
52 cd02526 GT2_RfbF_like RfbF is 98.6 5.6E-07 1.2E-11 94.8 13.2 112 589-710 49-165 (237)
53 cd06913 beta3GnTL1_like Beta 1 98.5 6E-06 1.3E-10 86.8 19.8 42 603-649 70-111 (219)
54 PF00535 Glycos_transf_2: Glyc 98.5 1.6E-07 3.5E-12 91.2 7.2 111 589-710 55-167 (169)
55 cd06442 DPM1_like DPM1_like re 98.5 3.2E-06 7E-11 88.1 17.2 60 589-661 55-114 (224)
56 cd06423 CESA_like CESA_like is 98.5 7.3E-07 1.6E-11 86.4 10.6 110 589-710 55-168 (180)
57 cd04185 GT_2_like_b Subfamily 98.5 3.9E-06 8.4E-11 86.7 16.1 83 589-710 53-135 (202)
58 PRK10018 putative glycosyl tra 98.3 2.3E-05 4.9E-10 87.8 16.5 52 588-649 61-112 (279)
59 PRK10073 putative glycosyl tra 98.3 9.8E-06 2.1E-10 92.3 13.9 49 604-658 72-120 (328)
60 cd04188 DPG_synthase DPG_synth 98.2 5.3E-05 1.1E-09 79.3 17.6 52 589-650 59-110 (211)
61 cd04179 DPM_DPG-synthase_like 98.2 4.6E-05 9.9E-10 77.0 15.7 110 589-711 56-166 (185)
62 KOG2571 Chitin synthase/hyalur 98.0 4.2E-05 9.2E-10 95.4 13.4 166 607-873 428-598 (862)
63 TIGR01556 rhamnosyltran L-rham 98.0 3.9E-05 8.4E-10 84.3 11.5 67 586-660 44-110 (281)
64 cd04187 DPM1_like_bac Bacteria 97.9 0.00038 8.3E-09 70.8 16.0 106 589-711 57-162 (181)
65 cd00761 Glyco_tranf_GTA_type G 97.8 0.00065 1.4E-08 64.2 14.9 51 604-661 64-114 (156)
66 PTZ00260 dolichyl-phosphate be 97.8 0.0019 4.1E-08 74.1 20.5 62 589-660 139-200 (333)
67 PRK10063 putative glycosyl tra 97.7 0.0009 2E-08 73.4 16.8 44 370-417 1-45 (248)
68 COG1216 Predicted glycosyltran 97.6 0.0016 3.5E-08 73.3 15.7 70 587-666 56-126 (305)
69 PF10111 Glyco_tranf_2_2: Glyc 97.3 0.0016 3.5E-08 72.5 11.4 101 604-709 75-181 (281)
70 COG5175 MOT2 Transcriptional r 97.0 0.00024 5.1E-09 79.9 1.5 48 132-183 16-64 (480)
71 PRK13915 putative glucosyl-3-p 96.9 0.0082 1.8E-07 68.3 12.1 50 604-660 102-152 (306)
72 PRK10714 undecaprenyl phosphat 95.9 0.19 4E-06 57.8 15.8 46 604-656 77-122 (325)
73 TIGR00570 cdk7 CDK-activating 92.5 0.14 3.1E-06 58.5 4.7 55 129-186 2-57 (309)
74 cd02511 Beta4Glucosyltransfera 90.3 2.8 6.1E-05 45.1 11.6 42 604-650 58-99 (229)
75 KOG2547 Ceramide glucosyltrans 89.2 0.33 7.2E-06 56.6 3.7 55 603-664 156-211 (431)
76 cd02514 GT13_GLCNAC-TI GT13_GL 88.7 2.5 5.4E-05 49.4 10.3 51 602-660 83-136 (334)
77 PF14446 Prok-RING_1: Prokaryo 86.4 0.52 1.1E-05 41.1 2.3 45 130-183 5-52 (54)
78 PF02364 Glucan_synthase: 1,3- 85.4 17 0.00037 46.9 15.6 199 593-899 262-483 (817)
79 KOG2068 MOT2 transcription fac 83.8 0.94 2E-05 52.2 3.5 53 130-186 249-301 (327)
80 COG0463 WcaA Glycosyltransfera 81.6 2.9 6.3E-05 40.0 5.5 49 369-423 2-50 (291)
81 PHA02862 5L protein; Provision 73.3 2.2 4.7E-05 44.2 2.1 48 130-184 2-54 (156)
82 PF05290 Baculo_IE-1: Baculovi 72.3 1.8 4E-05 44.1 1.3 50 130-185 80-134 (140)
83 smart00504 Ubox Modified RING 70.9 4.4 9.6E-05 35.0 3.2 45 132-184 3-47 (63)
84 cd00162 RING RING-finger (Real 70.0 4.5 9.8E-05 31.5 2.8 43 132-181 1-44 (45)
85 KOG0006 E3 ubiquitin-protein l 65.4 5 0.00011 46.1 3.0 41 125-166 310-352 (446)
86 PF14447 Prok-RING_4: Prokaryo 55.9 7.4 0.00016 34.3 1.7 31 155-187 24-54 (55)
87 KOG3800 Predicted E3 ubiquitin 55.6 7.8 0.00017 44.3 2.3 50 132-184 2-52 (300)
88 PHA02929 N1R/p28-like protein; 55.2 13 0.00028 41.7 3.9 54 128-183 172-227 (238)
89 PF13639 zf-RING_2: Ring finge 52.5 7.2 0.00016 31.8 1.1 43 132-179 2-44 (44)
90 KOG2932 E3 ubiquitin ligase in 51.4 7.5 0.00016 44.7 1.4 38 147-184 86-135 (389)
91 PLN03208 E3 ubiquitin-protein 48.5 20 0.00044 39.0 4.0 60 117-184 4-80 (193)
92 PRK12495 hypothetical protein; 47.8 12 0.00026 41.4 2.2 16 170-185 55-71 (226)
93 PRK00420 hypothetical protein; 47.3 7.5 0.00016 38.9 0.5 20 170-189 37-57 (112)
94 PHA02825 LAP/PHD finger-like p 44.2 17 0.00038 38.4 2.6 49 129-184 7-60 (162)
95 COG4858 Uncharacterized membra 43.4 1.3E+02 0.0029 32.9 8.9 59 1028-1086 99-159 (226)
96 TIGR00599 rad18 DNA repair pro 42.8 18 0.0004 43.3 2.9 53 124-184 19-72 (397)
97 KOG0320 Predicted E3 ubiquitin 40.3 18 0.00038 39.0 2.0 46 131-182 132-177 (187)
98 PF13712 Glyco_tranf_2_5: Glyc 36.6 73 0.0016 34.9 6.1 48 604-658 41-89 (217)
99 KOG2824 Glutaredoxin-related p 35.9 21 0.00046 40.7 1.9 43 127-180 226-270 (281)
100 KOG2068 MOT2 transcription fac 35.5 19 0.00041 41.9 1.5 28 157-184 1-31 (327)
101 COG5432 RAD18 RING-finger-cont 35.4 19 0.0004 41.3 1.3 53 122-184 16-71 (391)
102 PF13923 zf-C3HC4_2: Zinc fing 35.1 28 0.00062 27.7 2.0 29 150-178 11-39 (39)
103 smart00184 RING Ring finger. E 34.0 36 0.00079 25.3 2.4 24 155-178 15-39 (39)
104 KOG1734 Predicted RING-contain 32.6 16 0.00034 41.5 0.2 60 122-183 216-281 (328)
105 COG3813 Uncharacterized protei 32.1 34 0.00074 31.9 2.2 44 132-183 7-52 (84)
106 COG0601 DppB ABC-type dipeptid 32.0 8.9E+02 0.019 28.4 14.6 102 995-1112 211-314 (317)
107 PF13920 zf-C3HC4_3: Zinc fing 30.4 32 0.0007 28.8 1.7 44 132-183 4-48 (50)
108 PF14471 DUF4428: Domain of un 30.0 29 0.00062 30.1 1.3 30 132-168 1-30 (51)
109 COG4817 DNA-binding ferritin-l 29.3 43 0.00093 33.3 2.5 30 471-506 9-38 (111)
110 PF03966 Trm112p: Trm112p-like 29.1 14 0.00029 33.4 -0.8 23 162-184 42-65 (68)
111 PRK12438 hypothetical protein; 28.3 7.7E+02 0.017 33.5 14.0 55 1061-1115 261-316 (991)
112 COG0463 WcaA Glycosyltransfera 27.3 1.3E+02 0.0028 28.7 5.4 33 604-641 70-102 (291)
113 PF14446 Prok-RING_1: Prokaryo 27.1 25 0.00054 31.1 0.4 24 161-184 8-33 (54)
114 PRK07220 DNA topoisomerase I; 26.0 38 0.00082 43.8 2.0 47 131-180 590-643 (740)
115 PRK00068 hypothetical protein; 25.0 8.6E+02 0.019 33.0 13.6 43 1063-1105 263-305 (970)
116 PRK06393 rpoE DNA-directed RNA 24.7 40 0.00088 30.7 1.4 11 171-181 16-26 (64)
117 PF06906 DUF1272: Protein of u 23.9 94 0.002 27.8 3.3 43 132-182 7-51 (57)
118 COG1615 Uncharacterized conser 23.2 5.5E+02 0.012 33.6 10.8 46 1060-1105 237-282 (885)
119 COG5183 SSM4 Protein involved 23.0 65 0.0014 41.6 3.1 52 131-186 13-69 (1175)
120 cd00350 rubredoxin_like Rubred 21.8 37 0.00081 26.6 0.5 10 173-182 18-27 (33)
121 cd03031 GRX_GRX_like Glutaredo 21.3 56 0.0012 34.1 1.8 41 129-180 98-141 (147)
122 PRK09382 ispDF bifunctional 2- 20.3 2E+02 0.0043 34.5 6.3 27 622-648 96-122 (378)
123 TIGR00366 conserved hypothetic 20.3 3E+02 0.0065 33.8 7.8 44 1060-1103 63-108 (438)
124 PF13896 Glyco_transf_49: Glyc 20.2 1.3E+02 0.0028 35.1 4.6 38 620-658 126-164 (317)
125 KOG0317 Predicted E3 ubiquitin 20.2 90 0.002 36.0 3.2 47 129-184 238-285 (293)
126 KOG3103 Rab GTPase interacting 20.0 4.1E+02 0.0089 30.2 8.1 75 985-1086 156-230 (249)
No 1
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=0 Score=2891.08 Aligned_cols=1113 Identities=78% Similarity=1.340 Sum_probs=1038.7
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCcCCCCccccccccCCccccccccccccccCCCC-CCcceeeEEcCCCCCCCC
Q 042084 1 MASLSSQPSKKVRSGSSGGAKDSPSGRTSSSGQTVKFARRTSSGRYVSLSREDLDMSGEFS-GDYMNYTVHIPPTPDNQP 79 (1124)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pdn~p 79 (1124)
|++.+++++++..++++++..+ . ..++...++++|+|||+||||+|+||||+|++++.+ +||+||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1135)
T PLN02248 1 MASSSSKPSRKSLSSSSSSAGP-P-SNNSSSPQSVKFARRTSSGRYVSLSRDDLDLSGELSSSDYLNYTVHIPPTPDNQP 78 (1135)
T ss_pred CCCcCCCCCcccccCCCCCCCC-C-CCCCCCCCCCCCCccCCCCcceeccccccccccccccccceeeEEeCCCCCCCcc
Confidence 6888888888888887777644 2 223445567999999999999999999999999986 699999999999999999
Q ss_pred CCCchhhhhhhhhhhccccccCCCCccccchhhhhhhhcccCCCCcCCCCCCccccccCCCcccccCCCCcccccccCCc
Q 042084 80 MDSSSVAVKAEEQYVSNSLFTGGFNSVTRAHLMDKVIESQVNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPCECRFK 159 (1124)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~CeC~f~ 159 (1124)
| +.++||||||+++||||||+|||+|+|+|+||++++||||++++|++|.++|||+++|+||+|++..||||+|+
T Consensus 79 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1135)
T PLN02248 79 M-----AGKAEEQYVSNSIFTGGFNSVTRAHLMDKVIESEVSHPQMAGAKGSSCAMPGCDGKVMRDERGEDLLPCECGFK 153 (1135)
T ss_pred c-----ccchhhhccccceecCCCCccchhhhhhcccccccCCcccCCCCCCcccccCcccccccccccccCCcccccch
Confidence 9 56899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhcCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC--CCCC-CCCccc---ccccCCCCCCCCCcccccC
Q 042084 160 ICRDCYMDAQKDTGLCPGCKEPYKLGDYDDEIPDFSSGALPLPAP--NKDG-GNSNMT---MMKRNQNGEFDHNRWLFET 233 (1124)
Q Consensus 160 iCr~Cy~~~~~~g~~Cp~Ck~~y~r~d~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~ 233 (1124)
|||+||.|+.++|++||+||++||.+|++|++.|.+.+.++++.| .+++ |+|.++ .+.++|+++|||+||++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 233 (1135)
T PLN02248 154 ICRDCYIDAVKSGGICPGCKEPYKVTDLDDEVPDESSGALPLPPPGGSKMDRRLSLMKSNSLLMRSQTGDFDHNRWLFET 233 (1135)
T ss_pred hHHhHhhhhhhcCCCCCCCccccccccccccccccccccccCCCCCCcccccccccccccchhccCCCCCCCCceeeeec
Confidence 999999999999999999999999999877776655566777765 5566 788875 4557899999999999999
Q ss_pred CcCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCch
Q 042084 234 KGTYGYGNAFWPQDDMYGDDGEDGFKGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDA 313 (1124)
Q Consensus 234 ~~~~~~g~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a 313 (1124)
||||||||+.|+++...+++++.. ...+++|++|+||+||++|++++|+|||+++++||++|++||+||++|++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~ 310 (1135)
T PLN02248 234 KGTYGYGNAVWPKDDGYGDDGGGG---GPGEFMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDA 310 (1135)
T ss_pred ccccccccccCccccccCCCCCcc---ccccccccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999996654332221 22378999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHH
Q 042084 314 IWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTI 393 (1124)
Q Consensus 314 ~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTv 393 (1124)
+|+|+++++||+||+|+|+|+|++||+||+|.||++||++|||+|+|+||+++++||+||||||||||+||||++|+|||
T Consensus 311 ~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTV 390 (1135)
T PLN02248 311 MWLWGMSVVCEIWFAFSWLLDQLPKLCPINRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTI 390 (1135)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccccccccccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHH
Q 042084 394 LSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKI 473 (1124)
Q Consensus 394 lS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~ 473 (1124)
|||||+|||+|||+|||||||||+||||||+|||+|||+||||||||+|||||||+||++|.++++++++|+|++|||+|
T Consensus 391 LSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~ 470 (1135)
T PLN02248 391 LSILAADYPVEKLACYLSDDGGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRV 470 (1135)
T ss_pred HHHhcccccccceeEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccccccccccchHHHHHHHHhhhc-CCCCCCCcccccccccccCCCCCCCCcccCCCCCCcCCCc
Q 042084 474 KREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMRE-GGADPTEPIKVQKATWMADGTHWPGTWTVPTSEHAKGDHS 552 (1124)
Q Consensus 474 KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~-~~~~~~~~~~~p~~~wm~dgt~wpg~w~~~~~~~~~~dH~ 552 (1124)
||||||||+|||+|+++||+|||+||+.||++.++++++ ++.+|.+++|+||+|||+|||||||+|+.+.++|+++|||
T Consensus 471 KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~ 550 (1135)
T PLN02248 471 KREYDEFKVRINGLPDSIRRRSDAYNAREEIKAKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHA 550 (1135)
T ss_pred HHHHHHHHHHHHhhhhhccccccccchhHHHHhhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCc
Confidence 999999999999999999999999999999887766666 4788999999999999999999999999999999999999
Q ss_pred cceEEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCC
Q 042084 553 GILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDH 632 (1124)
Q Consensus 553 ~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~ 632 (1124)
+||||||++++++|..|..++++.+|+++++++||+|||||||||||++||+||||||||+||||+||||||||||||||
T Consensus 551 ~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDm 630 (1135)
T PLN02248 551 GIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDH 630 (1135)
T ss_pred ceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCc
Confidence 99999999999999988666778999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCC
Q 042084 633 YIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFD 712 (1124)
Q Consensus 633 y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~ 712 (1124)
|+|||++||+||||||||+|+++|||||||+|+|++++|||+||++||||++|+|+||+|||+||||||+|||+||||++
T Consensus 631 YiNns~alr~AMCf~lD~~g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~ 710 (1135)
T PLN02248 631 YIYNSLAIREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFD 710 (1135)
T ss_pred ccCCchhHHhcchheecCCCCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC---------CCccccc---cCCCCC--CCccccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCC
Q 042084 713 PPDPNKNPQ---------NKDTEMH---ALNPTD--FDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGR 778 (1124)
Q Consensus 713 pp~~~~~~~---------~~~~~~~---~~~~~~--~~~e~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~ 778 (1124)
||+.++.+. +.+.+.. ....++ .++|.....++++||+|++|++|+..++.+|+++++++++++++
T Consensus 711 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~ 790 (1135)
T PLN02248 711 PPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGR 790 (1135)
T ss_pred CcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhhHHHhhccccccccccccccc
Confidence 998743211 1100000 000111 12234445678999999999999998899999999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCCCH
Q 042084 779 PPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINL 858 (1124)
Q Consensus 779 ~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL 858 (1124)
++|+++.+++++++++++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+
T Consensus 791 ~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L 870 (1135)
T PLN02248 791 PPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINL 870 (1135)
T ss_pred ccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHH
Q 042084 859 TDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVY 938 (1124)
Q Consensus 859 ~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliy 938 (1124)
.++++||+|||+|++||++++++|++..++|+++|||+|+++++||++++++++|+++|++||++|++++++.+.+|++|
T Consensus 871 ~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~y 950 (1135)
T PLN02248 871 TDRLHQVLRWATGSVEIFFSRNNALLASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVY 950 (1135)
T ss_pred HHHHHHHHHHhhchHHHHhccCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999988778999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCcccccceEE
Q 042084 939 LLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYV 1018 (1124)
Q Consensus 939 llp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~ 1018 (1124)
+++++++++++.++|++|+|+++++|||+||||+|+++++|++|++++++|+|++++++|+||+|+.+++.+++|+++|+
T Consensus 951 ll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~a~ly~ 1030 (1135)
T PLN02248 951 LLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYI 1030 (1135)
T ss_pred HHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccccccccchhee
Confidence 99888898999999999999999999999999999999999999999999999999999999999987766778999999
Q ss_pred eecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHH
Q 042084 1019 VKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAI 1098 (1124)
Q Consensus 1019 f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~ 1098 (1124)
|+||++++|+++++++|++|+++|++|++++.++.|+.+++++|+++|+++|+|||+||||||+||+|+||+|||+++++
T Consensus 1031 f~wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P~iv~v~s~ll~~ 1110 (1135)
T PLN02248 1031 VKWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSI 1110 (1135)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeehHHHHHHHHH
Confidence 99999999999999999999999999999876677889999999999999999999999999999999999999999999
Q ss_pred HHHHhhheecCCCCCCCcccccccCC
Q 042084 1099 TLSLLWMAISPPGSTPAATGGEFKFP 1124 (1124)
Q Consensus 1099 ~~~llwv~i~~~~~~~~~~~~~~~~~ 1124 (1124)
+||||||+|+||.++ +++||+||||
T Consensus 1111 ~~sll~v~~~~~~~~-~~~~~~~~~~ 1135 (1135)
T PLN02248 1111 TISLLWVAISPPSGA-AQIGGGFQFP 1135 (1135)
T ss_pred HHHHHheEeccccCc-cccCceecCC
Confidence 999999999999988 8899999998
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=4.7e-275 Score=2450.22 Aligned_cols=934 Identities=50% Similarity=0.923 Sum_probs=824.8
Q ss_pred ccccccCCCCccccchhhhhhhhcc--cCCCCcCCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhc
Q 042084 95 SNSLFTGGFNSVTRAHLMDKVIESQ--VNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKD 171 (1124)
Q Consensus 95 ~~~~~~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~ 171 (1124)
++||++|+|| ||||+ +|+.+ ...|++++++||+||| |||+||+++|||+|||| ||+|||||+||||||||
T Consensus 4 ~~glvaGSh~---Rnelv--~i~~d~~~g~kp~~~~~gqiCqI--CGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERke 76 (1085)
T PLN02400 4 NAGMVAGSYR---RNELV--RIRHDSDSGPKPLKNLNGQICQI--CGDDVGVTETGDVFVACNECAFPVCRPCYEYERKD 76 (1085)
T ss_pred cccccccccc---cccee--eecccccccCCCccccCCceeee--cccccCcCCCCCEEEEEccCCCccccchhheeccc
Confidence 7899999999 99999 78755 4457899999999999 99999999999999999 99999999999999999
Q ss_pred C-CCCCCCCCCCcC--------CCCCCCCCCCCCCCCCCCCCCC-----C-----C-C------CCcccccccCC--CCC
Q 042084 172 T-GLCPGCKEPYKL--------GDYDDEIPDFSSGALPLPAPNK-----D-----G-G------NSNMTMMKRNQ--NGE 223 (1124)
Q Consensus 172 g-~~Cp~Ck~~y~r--------~d~~~~~~~~~~~~~~~~~~~~-----~-----~-~------~~~~~~~~~~~--~~~ 223 (1124)
| |+||||||+||| ||||||+.||.++++++...+. + + . .+.++.++.+| +++
T Consensus 77 Gnq~CPQCkTrYkR~KgsprV~GDeeedd~DDlenEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lt~g~~~s~e 156 (1085)
T PLN02400 77 GTQCCPQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNGKARHQWQGEDIELSSSSRHESQPIPLLTHGQPVSGE 156 (1085)
T ss_pred CCccCcccCCccccccCCCCCCcccccccchhhhhhhccccccccccccccccCccccCcccccCCCCccccCCcccCCC
Confidence 9 999999999997 7888888777555554332100 0 0 0 01112233222 222
Q ss_pred CC-----------------------------------CCcccccCC--cCCCccccccCCCCCCCCC-------------
Q 042084 224 FD-----------------------------------HNRWLFETK--GTYGYGNAFWPQDDMYGDD------------- 253 (1124)
Q Consensus 224 ~~-----------------------------------~~~~~~~~~--~~~~~g~~~w~~~~~~~~~------------- 253 (1124)
.. +.|.++++| +.|||||++||||+|.++.
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~~ 236 (1085)
T PLN02400 157 IPCATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKY 236 (1085)
T ss_pred CCCCCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhcccccccc
Confidence 22 123445555 6799999999999983211
Q ss_pred --C---CCC--C-CCCCCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHH
Q 042084 254 --G---EDG--F-KGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSVSCEI 325 (1124)
Q Consensus 254 --~---~~~--~-~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~lw~~~~~~E~ 325 (1124)
+ +.+ + +.++.+++|++++||+||++|++++|+|||+++++||++|++||+||++|++.+++|+|+++++||+
T Consensus 237 ~~~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~ 316 (1085)
T PLN02400 237 HEGKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEI 316 (1085)
T ss_pred ccccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHH
Confidence 1 110 0 1235678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCC
Q 042084 326 WFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEK 405 (1124)
Q Consensus 326 wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~k 405 (1124)
||+|+|+|+|++||+||+|+||+|||++||++++ ++++||+||||||||||.||||++|+||||||||+|||+||
T Consensus 317 wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~-----~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eK 391 (1085)
T PLN02400 317 WFALSWLLDQFPKWYPINRETYLDRLALRYDRDG-----EPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDK 391 (1085)
T ss_pred HHHHHHHHccCcccccccceeCHHHHHHHhccCC-----CcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999999998653 46899999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 042084 406 LACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRIN 485 (1124)
Q Consensus 406 l~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~ 485 (1124)
|+|||||||||+||||||.|||+|||+||||||||+|||||||+||++|.++++++++|+|++|||+|||||||||+|||
T Consensus 392 lscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe 471 (1085)
T PLN02400 392 VSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRIN 471 (1085)
T ss_pred eEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccccccccchHHHHHHHHhhhcCCCCCCCccccccccc-ccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCC
Q 042084 486 GLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQKATW-MADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSP 564 (1124)
Q Consensus 486 ~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~~p~~~w-m~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~ 564 (1124)
+|++ +..++|+++| |+|||+|||+| ++|||+|||||+++++
T Consensus 472 ~l~~-----------------------------~~~~~~~~~~~m~dgt~W~g~~--------~~dHp~iIqVll~~~~- 513 (1085)
T PLN02400 472 ALVA-----------------------------KAQKIPEEGWTMQDGTPWPGNN--------PRDHPGMIQVFLGHSG- 513 (1085)
T ss_pred HHHh-----------------------------hhccCCccccccccCccCCCCC--------CCCCchhhhhhhcCCC-
Confidence 9853 3457899999 99999999985 6899999999999872
Q ss_pred CCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHH
Q 042084 565 DPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGM 644 (1124)
Q Consensus 565 ~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~am 644 (1124)
. .|++|+ +||+|||||||||||++|||||||||||+||||+|||||||||||||||+|||+++|+||
T Consensus 514 -----~------~d~~g~--~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AM 580 (1085)
T PLN02400 514 -----G------LDTDGN--ELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAM 580 (1085)
T ss_pred -----C------cccccc--cCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhh
Confidence 1 234443 799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcc-CCCcEEEEccCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCC--C-
Q 042084 645 CFMMDK-GGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKN--P- 720 (1124)
Q Consensus 645 cff~Dp-~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~--~- 720 (1124)
|||||| .|+++|||||||+|+|+|++|||+|+++|||+++|+|+||+|||+|+||||+|||+||||++||..+.+ +
T Consensus 581 Cf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~ 660 (1085)
T PLN02400 581 CFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPN 660 (1085)
T ss_pred hheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCcccccccccc
Confidence 999999 689999999999999999999999999999999999999999999999999999999999999854321 0
Q ss_pred ---------CCC-c-----------------cccccCCCCCC-------Cccc----cccccccccCCcchhhcchhhhh
Q 042084 721 ---------QNK-D-----------------TEMHALNPTDF-------DSDL----DVNLLPKRFGNSTMLAESIPIAE 762 (1124)
Q Consensus 721 ---------~~~-~-----------------~~~~~~~~~~~-------~~e~----~~~~~~~~fg~s~~f~~s~~~~e 762 (1124)
+++ + ...+++++++. ++|. ....++++||+|++|++|+. .+
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~-~~ 739 (1085)
T PLN02400 661 IIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATF-ME 739 (1085)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHH-HH
Confidence 000 0 00122333221 1121 12347899999999999995 44
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEEE
Q 042084 763 FQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVY 842 (1124)
Q Consensus 763 ~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY 842 (1124)
.+|. +....++++++||++||||+||++|+||+||||.|+|+|||+.||++||++||||+|
T Consensus 740 ~~~~-------------------~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY 800 (1085)
T PLN02400 740 QGGI-------------------PPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIY 800 (1085)
T ss_pred hcCC-------------------CCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEe
Confidence 3332 222346789999999999999999999999999999999999999999999999999
Q ss_pred eccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhcccccc--ccccchhcchhhhhchhhhhhHHHHHHHHHHHHHH
Q 042084 843 CVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLA--SRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALS 920 (1124)
Q Consensus 843 ~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~--~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~ 920 (1124)
|+|++++|.|+||+|+.++++||+|||+|++||+++++||++. .++|+++|||+|+++++||++++++++|+++|++|
T Consensus 801 ~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~ 880 (1085)
T PLN02400 801 CMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFC 880 (1085)
T ss_pred cCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998999999999999999999999999999999999999885 37899999999999999999999999999999999
Q ss_pred HHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccccceEe
Q 042084 921 LISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTL 1000 (1124)
Q Consensus 921 LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~V 1000 (1124)
|++|++++|..+...+++++.+++++++++++|++|+|+++++|||+||||+|+++|+|++|++++++|+|++++++|.|
T Consensus 881 LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~V 960 (1085)
T PLN02400 881 LITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTV 960 (1085)
T ss_pred HHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCccccee
Confidence 99999999987665555665677788999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 042084 1001 TTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMG 1080 (1124)
Q Consensus 1001 TpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~g 1080 (1124)
|+|..+++ ..++++|+|+||++++|+++++++||+|+++|++++++++++.|+.+++++|+++|+++|+|||+||||+
T Consensus 961 TsK~~d~~--~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~g 1038 (1085)
T PLN02400 961 TSKASDED--GDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLG 1038 (1085)
T ss_pred cCCccccc--ccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99987643 2578999999999999999999999999999999999887778999999999999999999999999999
Q ss_pred cCCCccchHHHHHHHHHHHHHHhhheecCCCCC
Q 042084 1081 RRGKTPTIVFVWSGLIAITLSLLWMAISPPGST 1113 (1124)
Q Consensus 1081 Rkgr~P~~v~~~s~l~~~~~~llwv~i~~~~~~ 1113 (1124)
|++|+|+||++||++|+++||||||+|+||+..
T Consensus 1039 R~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~ 1071 (1085)
T PLN02400 1039 RQNRTPTIVIVWSILLASIFSLLWVRIDPFVSD 1071 (1085)
T ss_pred cCCCCceeHHHHHHHHHHHHHHHheeccccccC
Confidence 999999999999999999999999999999965
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.3e-272 Score=2419.56 Aligned_cols=933 Identities=48% Similarity=0.916 Sum_probs=823.6
Q ss_pred ccccccCCCCccccchhhhhhhhcc--cCCCCcCCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhc
Q 042084 95 SNSLFTGGFNSVTRAHLMDKVIESQ--VNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKD 171 (1124)
Q Consensus 95 ~~~~~~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~ 171 (1124)
++||++|+|| ||||+ +|+.+ ..+|++++.++|+||| |||+||++++||+|||| ||+|||||+||||||||
T Consensus 4 ~~~~~~gs~~---r~e~~--~~~~d~~~~~k~~~~~~~~iCqI--CGD~Vg~t~dGe~FVACn~C~fpvCr~Cyeyer~e 76 (1094)
T PLN02436 4 GGRLIAGSHN---RNEFV--LINADEIARIRSVQELSGQTCQI--CGDEIELTVDGEPFVACNECAFPVCRPCYEYERRE 76 (1094)
T ss_pred cccccccccc---cccee--EeccccccCCCCccccCCccccc--cccccCcCCCCCEEEeeccCCCccccchhhhhhhc
Confidence 7899999999 99999 77765 3357899999999999 99999999999999999 99999999999999999
Q ss_pred C-CCCCCCCCCCcC--------CCCCCCCCCCCCCCCCCCCC--------CCCC--CCCc--------------------
Q 042084 172 T-GLCPGCKEPYKL--------GDYDDEIPDFSSGALPLPAP--------NKDG--GNSN-------------------- 212 (1124)
Q Consensus 172 g-~~Cp~Ck~~y~r--------~d~~~~~~~~~~~~~~~~~~--------~~~~--~~~~-------------------- 212 (1124)
| |+|||||++||| ||+|||+.||.+++++++.. ++|. +|+.
T Consensus 77 g~~~Cpqckt~Y~r~kgs~~~~~d~ee~~~dd~e~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1094)
T PLN02436 77 GNQACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNGLDPEQVAEAMLSSRLNTGRHSNVSGIATPSELDSAPP 156 (1094)
T ss_pred CCccCcccCCchhhccCCCCcCCccccccchhhhhhhcCcccccchHHHHHHHhhhhcccCccccccccccccccccCCC
Confidence 9 999999999997 67777777765555554410 0110 1111
Q ss_pred ---ccccccCC-CCCCC--C----------------------------CcccccCC--cCCCccccccCCCCCCCCC---
Q 042084 213 ---MTMMKRNQ-NGEFD--H----------------------------NRWLFETK--GTYGYGNAFWPQDDMYGDD--- 253 (1124)
Q Consensus 213 ---~~~~~~~~-~~~~~--~----------------------------~~~~~~~~--~~~~~g~~~w~~~~~~~~~--- 253 (1124)
++.++.+| +++.. | .+.++++| +.|||||++||||++.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~ 236 (1094)
T PLN02436 157 GSQIPLLTYGEEDVEISSDRHALIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQN 236 (1094)
T ss_pred cCCCcccccCcccCccCCcccccccCCcccccccccccccccccccCCCccCCccccccccccCcHHHHHHHHHHHhhhh
Confidence 11222222 22221 1 13344555 6799999999999983111
Q ss_pred --------------CCCC-C--CCCCCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHH
Q 042084 254 --------------GEDG-F--KGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWL 316 (1124)
Q Consensus 254 --------------~~~~-~--~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~l 316 (1124)
++.+ . +.++.+++|++++||+||++|++++|+|||+++++||++|++||+||++|++.+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~ 316 (1094)
T PLN02436 237 EKLQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGL 316 (1094)
T ss_pred hcccccccccccccCCCCCCCCCCcccccccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHH
Confidence 1111 1 1124567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHH
Q 042084 317 WLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSI 396 (1124)
Q Consensus 317 w~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~ 396 (1124)
|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++ ++++||+||||||||||.||||++|+||||||
T Consensus 317 Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~-----~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSi 391 (1094)
T PLN02436 317 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEG-----KPSELASVDVFVSTVDPMKEPPLITANTVLSI 391 (1094)
T ss_pred HHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCC-----CcccCCceeeEeccCCcccCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999998653 47899999999999999999999999999999
Q ss_pred HccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHH
Q 042084 397 LAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKRE 476 (1124)
Q Consensus 397 la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~Kre 476 (1124)
||+|||+|||+|||||||||+||||||.|||+|||+||||||||+|||||||+||++|.+++++|.+++|++|||+||||
T Consensus 392 LA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKre 471 (1094)
T PLN02436 392 LAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKRE 471 (1094)
T ss_pred HhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccccccccccchHHHHHHHHhhhcCCCCCCCccccccccc-ccCCCCCCCCcccCCCCCCcCCCccce
Q 042084 477 YDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQKATW-MADGTHWPGTWTVPTSEHAKGDHSGIL 555 (1124)
Q Consensus 477 Yee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~~p~~~w-m~dgt~wpg~w~~~~~~~~~~dH~~ii 555 (1124)
|||||+|||+|++ .+.++|+++| |+|||+|||+| ++|||+||
T Consensus 472 YEe~K~RIe~l~~-----------------------------~~~~vp~~~~~m~dgt~W~g~~--------~~dHp~II 514 (1094)
T PLN02436 472 YEEFKVKINALVA-----------------------------TAQKVPEDGWTMQDGTPWPGNN--------VRDHPGMI 514 (1094)
T ss_pred HHHHHHHHHHHHh-----------------------------hcccCchhhhhhccCccCCCCC--------CCCCccce
Confidence 9999999999863 2357899999 99999999985 68999999
Q ss_pred EEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccC
Q 042084 556 QVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIY 635 (1124)
Q Consensus 556 qV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~n 635 (1124)
||||++++. .|++| .+||+|||||||||||++|||||||||||+||||+|||||||||||||||+|
T Consensus 515 qVll~~~~~------------~d~~g--~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN 580 (1094)
T PLN02436 515 QVFLGHSGV------------RDVEG--NELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN 580 (1094)
T ss_pred EEEecCCCC------------ccccc--ccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence 999998621 13344 3799999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhcc-CCCcEEEEccCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCC
Q 042084 636 NCKAIREGMCFMMDK-GGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPP 714 (1124)
Q Consensus 636 np~~Lr~amcff~Dp-~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp 714 (1124)
||+++|+|||||||| .|+++|||||||+|+|++++|||+|+++|||+++|+|+||+|||+|+||||+|||+||||++||
T Consensus 581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp 660 (1094)
T PLN02436 581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 660 (1094)
T ss_pred chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence 999999999999999 6889999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCC-----------------C-CC---cc-----------ccccCCCCCCC-------c----cccccccccccCCc
Q 042084 715 DPNKNP-----------------Q-NK---DT-----------EMHALNPTDFD-------S----DLDVNLLPKRFGNS 751 (1124)
Q Consensus 715 ~~~~~~-----------------~-~~---~~-----------~~~~~~~~~~~-------~----e~~~~~~~~~fg~s 751 (1124)
...+.. + ++ +. ..+.+.+++.+ . ......++++||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 740 (1094)
T PLN02436 661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS 740 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence 543211 0 00 00 00112222211 1 12234578999999
Q ss_pred chhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHH
Q 042084 752 TMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGY 831 (1124)
Q Consensus 752 ~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~Tgl 831 (1124)
++|++|+. .+.+| +++++.++++++||++||||+||++|+||+||||.|+|+|||+.||+
T Consensus 741 ~~fi~S~~-~~~~~-------------------~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~ 800 (1094)
T PLN02436 741 PVFVASTL-LENGG-------------------VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGF 800 (1094)
T ss_pred HHHHHHHH-HhhcC-------------------CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHH
Confidence 99999995 44444 23445678999999999999999999999999999999999999999
Q ss_pred HHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhcccccc--ccccchhcchhhhhchhhhhhHHH
Q 042084 832 RMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLA--SRKLKLLQRLAYLNVGIYPFTSLF 909 (1124)
Q Consensus 832 rLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~--~~~L~l~QRL~Yl~~~lypl~sl~ 909 (1124)
+||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++|++|+++ .++|+|+|||+|+++++||+++++
T Consensus 801 rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp 880 (1094)
T PLN02436 801 KMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIP 880 (1094)
T ss_pred HHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998999999999999999999999999999999999999984 468999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHH
Q 042084 910 LIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLK 989 (1124)
Q Consensus 910 ~LiylllP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk 989 (1124)
+++|+++|++||++|++++|..+..++++++.+|+++++++++|++|+|+++++|||+||||+|+++|+|++|++++++|
T Consensus 881 ~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLK 960 (1094)
T PLN02436 881 LIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLK 960 (1094)
T ss_pred HHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876666566667888999999999999999999999999999999999999999999999
Q ss_pred HHhccccceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHH
Q 042084 990 VMAGIEISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLA 1069 (1124)
Q Consensus 990 ~Lgg~k~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~ 1069 (1124)
+|++++++|+||+|..++ +.++++|+|+||++++|+++++++|++|+++|++++++++++.|+.+++++|+++|+++
T Consensus 961 vLggs~~~F~VTsK~~d~---~~~a~ly~f~~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv 1037 (1094)
T PLN02436 961 VLAGVNTNFTVTSKAADD---GEFSELYLFKWTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIV 1037 (1094)
T ss_pred HhccCcccceeccccccc---ccccceeeecceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 999999999999998754 25779999999999999999999999999999999998877889999999999999999
Q ss_pred HHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhheecCCCCC
Q 042084 1070 HLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGST 1113 (1124)
Q Consensus 1070 nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv~i~~~~~~ 1113 (1124)
|+|||+||||+|++|+||||+|||++|+++||||||+|+||+..
T Consensus 1038 ~lyPf~kgL~gr~~r~P~~v~v~s~lla~~~~l~~v~~~~~~~~ 1081 (1094)
T PLN02436 1038 HLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVSK 1081 (1094)
T ss_pred HHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHeeeccccCC
Confidence 99999999999999999999999999999999999999999965
No 4
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.7e-269 Score=2400.94 Aligned_cols=913 Identities=51% Similarity=0.948 Sum_probs=806.4
Q ss_pred CCCCcCCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-CCCCCCCCCCcC--------CCCCCC
Q 042084 121 NHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT-GLCPGCKEPYKL--------GDYDDE 190 (1124)
Q Consensus 121 ~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r--------~d~~~~ 190 (1124)
.++++++.+||+||| |||+||++++||+|||| ||+|||||+||||||||| |+||||||+||| ||||||
T Consensus 8 ~~k~~~~~~~qiCqI--CGD~vg~~~~Ge~FVAC~eC~FPVCrpCYEYEr~eG~q~CPqCktrYkr~kgsprv~gDeeed 85 (1079)
T PLN02638 8 GAKPMKHGGGQVCQI--CGDNVGKTVDGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKRHKGSPAILGDEEED 85 (1079)
T ss_pred CCCCccccCCceeee--cccccCcCCCCCEEEEeccCCCccccchhhhhhhcCCccCCccCCchhhhcCCCCcCcccccc
Confidence 356899999999999 99999999999999999 999999999999999999 999999999997 776666
Q ss_pred C-CCCCCCCCCCCCC---------CCC-C-CCCc-------------------ccccccCC--CCCCC------------
Q 042084 191 I-PDFSSGALPLPAP---------NKD-G-GNSN-------------------MTMMKRNQ--NGEFD------------ 225 (1124)
Q Consensus 191 ~-~~~~~~~~~~~~~---------~~~-~-~~~~-------------------~~~~~~~~--~~~~~------------ 225 (1124)
+ .||.+++++++.. ++| + +|+. ++.++.+| +++..
T Consensus 86 ~~~dDle~ef~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 165 (1079)
T PLN02638 86 GDADDGASDFNYPSSNQDQKQKIAERMLSWRMNSGRGEDVGAPNYDKEVSHNHIPLLTNGQSVSGELSAASPERLSMASP 165 (1079)
T ss_pred CcchhhhhhhccccccccchhHHHHHHhhhhcccCcCcccccccccccCCCCCCcccccCccccCccCCCCCccccccCc
Confidence 5 5665455543321 111 1 2221 11222222 22221
Q ss_pred -----------------CCcccccCC--cCCCccccccCCCCCCCCC---------------------CCC-CCC---CC
Q 042084 226 -----------------HNRWLFETK--GTYGYGNAFWPQDDMYGDD---------------------GED-GFK---GG 261 (1124)
Q Consensus 226 -----------------~~~~~~~~~--~~~~~g~~~w~~~~~~~~~---------------------~~~-~~~---~~ 261 (1124)
+.|.++++| ++|||||++||+|++.++. ++. +.+ .+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~wk~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1079)
T PLN02638 166 GAGGKRIPYASDVNQSPNIRVVDPVREFGSPGLGNVAWKERVDGWKMKQDKNTIPMSTGTAPSEGRGGGDIDASTDVLMD 245 (1079)
T ss_pred cccCCcccccccccccCCcccCCccccccccccccHHHHHHHHHHHhcccccccccccccccccccCcCCCCCccccccc
Confidence 224555555 6899999999999883110 000 001 12
Q ss_pred CCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhhcccccc
Q 042084 262 MPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLFP 341 (1124)
Q Consensus 262 ~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~lw~~~~~~E~wf~f~wlL~q~~kw~P 341 (1124)
+.++++++++||+||++|++++|+|||+++++||++|++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+|
T Consensus 246 ~~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~P 325 (1079)
T PLN02638 246 DALLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFALSWILDQFPKWLP 325 (1079)
T ss_pred cccccccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHH
Q 042084 342 VNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFE 421 (1124)
Q Consensus 342 i~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~ 421 (1124)
|+|+||+|||++||++++ ++++||+||||||||||.||||++|+||||||||+|||+|||+|||||||||+||||
T Consensus 326 v~R~t~~drL~~r~~~~~-----~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~ 400 (1079)
T PLN02638 326 VNRETYLDRLALRYDREG-----EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFE 400 (1079)
T ss_pred cccccCHHHHHHHhccCC-----CcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHH
Confidence 999999999999998653 468999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchH
Q 042084 422 AMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAR 501 (1124)
Q Consensus 422 aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ 501 (1124)
||.|||+|||+||||||||+|||||||+||++|.++++++++|+|++|||+|||||||||+|||++++
T Consensus 401 AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a------------ 468 (1079)
T PLN02638 401 ALSETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVA------------ 468 (1079)
T ss_pred HHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 99999999999999999999999999999999999999999999999999999999999999998853
Q ss_pred HHHHHHHhhhcCCCCCCCccccccccc-ccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCccccccc
Q 042084 502 EEMKMIKHMREGGADPTEPIKVQKATW-MADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFT 580 (1124)
Q Consensus 502 ee~~~~~~~~~~~~~~~~~~~~p~~~w-m~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~ 580 (1124)
+..++|+++| |+|||+|||+| ++|||+||||++++++ . .|.+
T Consensus 469 -----------------~~~~~p~~~~~m~dgt~W~g~~--------~~dHp~IiqVll~~~~------~------~d~~ 511 (1079)
T PLN02638 469 -----------------KAQKVPEEGWIMQDGTPWPGNN--------TRDHPGMIQVFLGHSG------G------LDTE 511 (1079)
T ss_pred -----------------hccccCCccccccCCccCCCCC--------CCCCHHHHHHHhcCCC------c------cccc
Confidence 3467899999 99999999997 6899999999999872 1 2334
Q ss_pred ccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhcc-CCCcEEEEc
Q 042084 581 DVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDK-GGEDICYIQ 659 (1124)
Q Consensus 581 ~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp-~g~~vafVQ 659 (1124)
| ++||+|||||||||||++||+||||||+|+||||+|||||||||||||||+|||++||+|||||||| .|+++||||
T Consensus 512 g--~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQ 589 (1079)
T PLN02638 512 G--NELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQ 589 (1079)
T ss_pred c--ccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEec
Confidence 4 3799999999999999999999999999999999999999999999999999999999999999999 589999999
Q ss_pred cCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCC------------CCCc--c
Q 042084 660 FPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNP------------QNKD--T 725 (1124)
Q Consensus 660 fPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~------------~~~~--~ 725 (1124)
|||+|+|++++|||+|+++||||++|+|+||+|||+||||||+|||+||||++||+..+.. ++++ .
T Consensus 590 FPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (1079)
T PLN02638 590 FPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKS 669 (1079)
T ss_pred CCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999998753210 0000 0
Q ss_pred ----------------ccccCCCCCC---------Ccc----ccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCC
Q 042084 726 ----------------EMHALNPTDF---------DSD----LDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSY 776 (1124)
Q Consensus 726 ----------------~~~~~~~~~~---------~~e----~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~ 776 (1124)
..+.+.+.+. +.| .....++++||+|++|++|+ +++++|.+
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~-~~~~~~~~--------- 739 (1079)
T PLN02638 670 SKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVAST-LMENGGVP--------- 739 (1079)
T ss_pred cchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHH-HHhhcCCC---------
Confidence 0011111110 011 11235789999999999999 57777643
Q ss_pred CCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCC
Q 042084 777 GRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPI 856 (1124)
Q Consensus 777 ~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~ 856 (1124)
....++++++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+
T Consensus 740 ----------~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~ 809 (1079)
T PLN02638 740 ----------QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPI 809 (1079)
T ss_pred ----------CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCC
Confidence 2234678999999999999999999999999999999999999999999999999999989999999999
Q ss_pred CHHHHHHHhhhhhcchhHHHhhhcccccc--ccccchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHH
Q 042084 857 NLTDRLHQVLRWATGSVEIFFSRNNAFLA--SRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNIT 934 (1124)
Q Consensus 857 tL~a~l~QR~RWA~G~lQIl~sk~~pLl~--~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~ 934 (1124)
|+.+++.||+|||+|++||+++|++|++. .++|+++|||+|+++++||++++++++|+++|++||++|++++|..+..
T Consensus 810 ~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~~ 889 (1079)
T PLN02638 810 NLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISNI 889 (1079)
T ss_pred CHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccch
Confidence 99999999999999999999999999885 4789999999999999999999999999999999999999999977665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCccccc
Q 042084 935 FLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYA 1014 (1124)
Q Consensus 935 fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~ya 1014 (1124)
++++++.+|+++++++++|++|+|+++++|||+||||+|+++++|++|++++++|+|++++++|.||+|..+++ +.++
T Consensus 890 ~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~--~~~~ 967 (1079)
T PLN02638 890 ASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED--GDFA 967 (1079)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccccc--cccc
Confidence 55566677889999999999999999999999999999999999999999999999999999999999987643 3578
Q ss_pred ceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHH
Q 042084 1015 DLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSG 1094 (1124)
Q Consensus 1015 el~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~ 1094 (1124)
++|+|+||++++|+++|+++||+|+++|+++++++++..|+.+++++|+++|+++|+|||+||||||+||+||||+|||+
T Consensus 968 ely~f~wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~~r~P~~v~v~s~ 1047 (1079)
T PLN02638 968 ELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSI 1047 (1079)
T ss_pred ceeEecceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHH
Confidence 99999999999999999999999999999999987777899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhheecCCCCC
Q 042084 1095 LIAITLSLLWMAISPPGST 1113 (1124)
Q Consensus 1095 l~~~~~~llwv~i~~~~~~ 1113 (1124)
+++++||||||+|+||+..
T Consensus 1048 ll~~~~~l~~v~~~~~~~~ 1066 (1079)
T PLN02638 1048 LLASIFSLLWVRIDPFTTR 1066 (1079)
T ss_pred HHHHHHHHHHheecccccC
Confidence 9999999999999999965
No 5
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=4e-266 Score=2366.63 Aligned_cols=904 Identities=50% Similarity=0.923 Sum_probs=796.4
Q ss_pred CCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-CCCCCCCCCCcC--------CC-CCCCCCCC
Q 042084 126 AGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT-GLCPGCKEPYKL--------GD-YDDEIPDF 194 (1124)
Q Consensus 126 ~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r--------~d-~~~~~~~~ 194 (1124)
++.++|+||| |||+||++++||+|||| ||+|||||+|||||+||| |+|||||++||| || +||++.||
T Consensus 11 ~~~~~~~c~i--CGd~vg~~~~Ge~FVAC~eC~fpvCr~cyeye~~~g~~~cp~c~t~y~~~~~~~~~~~d~~~~~~~dd 88 (1044)
T PLN02915 11 QSADAKTCRV--CGDEVGVKEDGQPFVACHVCGFPVCKPCYEYERSEGNQCCPQCNTRYKRHKGCPRVEGDDEEGNDMDD 88 (1044)
T ss_pred cCCCcchhhc--cccccCcCCCCCEEEEeccCCCccccchhhhhhhcCCccCCccCCchhhhcCCCCccCCccccccchh
Confidence 6789999999 99999999999999999 999999999999999999 999999999997 56 34455566
Q ss_pred CCCCCCCCCCC---CCC--CCCcc--------------cccccCCCCCCCCCcccccCCcCCCccccccCCCCCCCCCC-
Q 042084 195 SSGALPLPAPN---KDG--GNSNM--------------TMMKRNQNGEFDHNRWLFETKGTYGYGNAFWPQDDMYGDDG- 254 (1124)
Q Consensus 195 ~~~~~~~~~~~---~~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~~~- 254 (1124)
.+++++++..+ .|. +|+.. +.+. + +++..+ +-+.++|. ||||++||+|++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~~--~~g~~~wk~r~~~wk~~~ 163 (1044)
T PLN02915 89 FEDEFQIKSPQDHEPVHQNVFAGSENGDYNAQQWRPGGPAFS-S-TGSVAG-KDLEAERE--GYGNAEWKDRVDKWKTRQ 163 (1044)
T ss_pred hhhhhccccccccchhhhhhccCCCCccccccccCCCCcccc-C-CCCcCC-CCcCcccc--CcCCHHHHHHHHHHHhhh
Confidence 44555544211 121 22211 1111 1 222221 13333332 99999999999842211
Q ss_pred -----------C-CCC-CCCCCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHH
Q 042084 255 -----------E-DGF-KGGMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSV 321 (1124)
Q Consensus 255 -----------~-~~~-~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~lw~~~~ 321 (1124)
+ ++. +.++.++++++++||+||++|++++|+|||+++++||++|++||+||++|++.+++|+|++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~ 243 (1044)
T PLN02915 164 EKRGLVNKDDSDDGDDKGDEEEYLLAEARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLWLISV 243 (1044)
T ss_pred hhhccccccccCCCCCCCCcccccccccCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHHHHHH
Confidence 0 011 123567889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCC
Q 042084 322 SCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDY 401 (1124)
Q Consensus 322 ~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DY 401 (1124)
+||+||+|+|+|+|++||+||+|.||+|||++|||+++ ++++||+||||||||||.||||++|+||||||||+||
T Consensus 244 ~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~e~~~-----~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 318 (1044)
T PLN02915 244 ICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDG-----EPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDY 318 (1044)
T ss_pred HHHHHHHHHHHHccCccccccccccCHHHHHHHhccCC-----CcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999998764 3678999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 042084 402 PVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFK 481 (1124)
Q Consensus 402 P~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k 481 (1124)
|+|||+|||||||||+||||||.|||+|||+||||||||||||||||+||++|.++++++++++|++|||+|||||||||
T Consensus 319 P~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K 398 (1044)
T PLN02915 319 PVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFK 398 (1044)
T ss_pred cccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcccccccccccchHHHHHHHHhhhcCCCCCCCccccccccc-ccCCCCCCCCcccCCCCCCcCCCccceEEEec
Q 042084 482 VRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQKATW-MADGTHWPGTWTVPTSEHAKGDHSGILQVMLK 560 (1124)
Q Consensus 482 ~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~~p~~~w-m~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~ 560 (1124)
+|||+|++ ++.++|+++| |+|||+|||+|+ +|||+||||||+
T Consensus 399 ~RIe~l~~-----------------------------~~~~~~~~~~~m~dgt~W~g~~~--------~dHp~IIqVll~ 441 (1044)
T PLN02915 399 VRINALVA-----------------------------KAQKKPEEGWVMQDGTPWPGNNT--------RDHPGMIQVYLG 441 (1044)
T ss_pred HHHHHHHh-----------------------------hhccCCcccccccCCccCCCCCC--------CCCccceEEeec
Confidence 99999863 2357888988 999999999984 799999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHH
Q 042084 561 PPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAI 640 (1124)
Q Consensus 561 ~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~L 640 (1124)
+++ ..|++|+ +||+||||||||||||+|||||||||||+||||+|||||||||||||||+|||+++
T Consensus 442 ~~~------------~~d~~g~--~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~ 507 (1044)
T PLN02915 442 SEG------------ALDVEGK--ELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAV 507 (1044)
T ss_pred CCC------------CcccccC--ccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhh
Confidence 762 1345553 79999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcc-CCCcEEEEccCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCC
Q 042084 641 REGMCFMMDK-GGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKN 719 (1124)
Q Consensus 641 r~amcff~Dp-~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~ 719 (1124)
|+|||||||| .|+++|||||||+|+|+|++|||+||++||||++|+|+||+|||+|+||||+|||+||||++||...+.
T Consensus 508 r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~ 587 (1044)
T PLN02915 508 REAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKR 587 (1044)
T ss_pred HhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCcccccc
Confidence 9999999999 689999999999999999999999999999999999999999999999999999999999999863211
Q ss_pred C-----------------CCC--cc--------------------------------------ccccCCCCCCCc-----
Q 042084 720 P-----------------QNK--DT--------------------------------------EMHALNPTDFDS----- 737 (1124)
Q Consensus 720 ~-----------------~~~--~~--------------------------------------~~~~~~~~~~~~----- 737 (1124)
+ +++ +. ..+.+.+++.++
T Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (1044)
T PLN02915 588 PKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGY 667 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 000 00 000111111111
Q ss_pred -c------ccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccccccccc
Q 042084 738 -D------LDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKT 810 (1124)
Q Consensus 738 -e------~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T 810 (1124)
| .....++++||+|++|++|+. .+.+|.+ ....++++++||++||||+||++|
T Consensus 668 ~~~~~~~~~~~~~~~~~fG~S~~fi~S~~-~~~~~~~-------------------~~~~~~s~l~eA~~V~sC~YE~~T 727 (1044)
T PLN02915 668 DELEKSSLMSQKNFEKRFGQSPVFIASTL-MEDGGLP-------------------EGTNPAALIKEAIHVISCGYEEKT 727 (1044)
T ss_pred cchhhhhhhhhhhhhhhcCCcHHHHHHHH-HhhcCCC-------------------CCCCcHHHHHHHHhccccCCCccC
Confidence 1 112347899999999999995 3544432 223567999999999999999999
Q ss_pred ccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhcccccc--ccc
Q 042084 811 EWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLA--SRK 888 (1124)
Q Consensus 811 ~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~--~~~ 888 (1124)
+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.++++||+|||+|++||++++++|++. .++
T Consensus 728 ~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~ 807 (1044)
T PLN02915 728 EWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGK 807 (1044)
T ss_pred chhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCC
Confidence 999999999999999999999999999999999998999999999999999999999999999999999999985 479
Q ss_pred cchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchh
Q 042084 889 LKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNE 968 (1124)
Q Consensus 889 L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~q 968 (1124)
|+++|||+|+++++||++++++++|+++|++||++|++++|..+..+.+|++.+++++++++++|++|+|+++++|||+|
T Consensus 808 L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQ 887 (1044)
T PLN02915 808 LKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNE 887 (1044)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh
Confidence 99999999999999999999999999999999999999999776666677777888888999999999999999999999
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHh
Q 042084 969 QFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIY 1048 (1124)
Q Consensus 969 r~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~ 1048 (1124)
|||+|+++++|++|++++++|+|++++++|+||+|+.+++ +++++++|+|+||++++|+++++++|++|+++|++++++
T Consensus 888 q~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~-~d~~~ely~F~~S~l~iP~ttllllNlvalv~Gi~~~i~ 966 (1044)
T PLN02915 888 QFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDE-ADEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAIN 966 (1044)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccc-hhhhccceeecceehHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999987653 346789999999999999999999999999999999988
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhheecCCCCC
Q 042084 1049 ATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGST 1113 (1124)
Q Consensus 1049 ~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv~i~~~~~~ 1113 (1124)
+++..|+.+++++|+++|+++|+|||++|||||+||+|+||+|||++++++||||||+|+||+..
T Consensus 967 ~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~~r~P~~v~v~s~lla~~~~ll~v~~~~~~~~ 1031 (1044)
T PLN02915 967 NGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPK 1031 (1044)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeehHHHHHHHHHHHHHHheeccccCC
Confidence 76778999999999999999999999999999999999999999999999999999999999965
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=2.2e-264 Score=2350.91 Aligned_cols=933 Identities=49% Similarity=0.908 Sum_probs=811.2
Q ss_pred ccccccCCCCccccchhhhhhhhcccCCCCcCCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-
Q 042084 95 SNSLFTGGFNSVTRAHLMDKVIESQVNHPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT- 172 (1124)
Q Consensus 95 ~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g- 172 (1124)
++||++|+|| ||||+ +|+.+...|++++.++|+||| |||+||+|++||+|||| ||+|||||+|||||||||
T Consensus 4 ~~g~~~gs~~---r~~~~--~~~~~~~~k~~~~~~~~~C~i--Cgd~vg~~~~g~~fvaC~~C~fpvCr~Cyeyer~eg~ 76 (1040)
T PLN02189 4 SAGLVAGSHN---RNELV--VIHGHEEPKPLRNLDGQVCEI--CGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGT 76 (1040)
T ss_pred cccccccccc---cccee--eeccccCCCCcccccCccccc--cccccCcCCCCCEEEeeccCCCccccchhhhhhhcCC
Confidence 6899999999 99999 678664456899999999999 99999999999999999 999999999999999999
Q ss_pred CCCCCCCCCCcC--------CCCCCCCCCCCCCCCCCCCC--------CCCC--CCCc------------ccccccCC--
Q 042084 173 GLCPGCKEPYKL--------GDYDDEIPDFSSGALPLPAP--------NKDG--GNSN------------MTMMKRNQ-- 220 (1124)
Q Consensus 173 ~~Cp~Ck~~y~r--------~d~~~~~~~~~~~~~~~~~~--------~~~~--~~~~------------~~~~~~~~-- 220 (1124)
|+|||||++||| ||+|||+.||.+++++++.. +.|. +|+. ++.++.++
T Consensus 77 q~CpqCkt~Y~r~kgs~~v~gd~ee~~~dd~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1040)
T PLN02189 77 QNCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDEQDKNKHITEAMLHGKMSYGRGPDDDENNQFPPVITGVRSR 156 (1040)
T ss_pred ccCcccCCchhhccCCCCcCCccccccchhhhhhccccccccchhHHHHHHhhhhcccCCCcccCCCcCCCcccccCccc
Confidence 999999999997 77777777775455544321 0110 1211 11222211
Q ss_pred --CCCC-------CCCccccc--CC----cCC-Cccc--------cccCCCCCCCCCCC----CCCC--CCCCCCCCCCC
Q 042084 221 --NGEF-------DHNRWLFE--TK----GTY-GYGN--------AFWPQDDMYGDDGE----DGFK--GGMPDNSDKPW 270 (1124)
Q Consensus 221 --~~~~-------~~~~~~~~--~~----~~~-~~g~--------~~w~~~~~~~~~~~----~~~~--~~~~~~~~~~~ 270 (1124)
+++. ||...... .| ..| +.|. ..||||++.++.+. ++.+ .++..++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~rv~~wk~~~~~~~~~~~~~~~d~~~~~~~~ 236 (1040)
T PLN02189 157 PVSGEFPIGSGYGHGEQMLSSSLHKRVHPYPVSEPGSAKWDEKKEGGWKERMDDWKMQQGNLGPDPDDYDADMALIDEAR 236 (1040)
T ss_pred cccCCcCccccccccccccCCcccCccCcccccCCCcccCCccccccHHHHHHHHHhhcccCCCCCCCCchhhhhcccCC
Confidence 1222 11000000 00 001 1121 34999998543211 1111 22455678999
Q ss_pred CCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhH
Q 042084 271 KPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEV 350 (1124)
Q Consensus 271 ~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~ 350 (1124)
+||+||++|++++|+|||+++++||++|++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+||
T Consensus 237 ~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R~t~~dr 316 (1040)
T PLN02189 237 QPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDRETYLDR 316 (1040)
T ss_pred CCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHHHHHHHHHHHHHHHHHHccCcccccccceeCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhh
Q 042084 351 LRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFA 430 (1124)
Q Consensus 351 L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA 430 (1124)
|++||++++ ++++||+||||||||||.||||++|+||||||||+|||+|||+|||||||||+||||||.|||+||
T Consensus 317 L~~r~~~~~-----~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 391 (1040)
T PLN02189 317 LSLRYEREG-----EPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFA 391 (1040)
T ss_pred HHHHhccCC-----CcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHH
Confidence 999998764 367899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHHHHhh
Q 042084 431 DLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHM 510 (1124)
Q Consensus 431 ~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~ 510 (1124)
|+||||||||||||||||+||++|.++++++++++|++||++|||||||||+|||++++
T Consensus 392 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a--------------------- 450 (1040)
T PLN02189 392 RKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVA--------------------- 450 (1040)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 99999999999999999999999999999999999999999999999999999998853
Q ss_pred hcCCCCCCCccccccccc-ccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCCCcE
Q 042084 511 REGGADPTEPIKVQKATW-MADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLF 589 (1124)
Q Consensus 511 ~~~~~~~~~~~~~p~~~w-m~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~L 589 (1124)
+..++|+++| |+|||+|||+| ++|||+||||++++++. .|++| .+||+|
T Consensus 451 --------~~~~~p~~~~~m~dGt~W~g~~--------~~dHp~IiQVll~~~~~------------~d~~g--~~lP~L 500 (1040)
T PLN02189 451 --------KAQKVPPEGWIMQDGTPWPGNN--------TRDHPGMIQVFLGHSGG------------HDTEG--NELPRL 500 (1040)
T ss_pred --------hcCccCCccceeccCccCCCCC--------CCCCHHHHHHHhcCCCC------------ccccc--ccccee
Confidence 3467899999 99999999997 68999999999998731 12333 379999
Q ss_pred EEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhcc-CCCcEEEEccCccccCCC
Q 042084 590 VYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDK-GGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 590 vYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp-~g~~vafVQfPQ~F~nid 668 (1124)
||||||||||++||+||||||+|+||||+|||||||||||||||+|||++||+|||||||| .|+++|||||||+|+|++
T Consensus 501 VYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~ 580 (1040)
T PLN02189 501 VYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGID 580 (1040)
T ss_pred EEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998 688999999999999999
Q ss_pred cchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCC------------CCCc-cccc-----cC
Q 042084 669 PSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNP------------QNKD-TEMH-----AL 730 (1124)
Q Consensus 669 ~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~------------~~~~-~~~~-----~~ 730 (1124)
++|+|+|+++|||+++|+|+||+|||+||||||+|||+||||++||+..+.. ++++ .... ..
T Consensus 581 k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1040)
T PLN02189 581 THDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVA 660 (1040)
T ss_pred CCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999998542211 0000 0000 00
Q ss_pred CCCCCCcc----ccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccccc
Q 042084 731 NPTDFDSD----LDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWY 806 (1124)
Q Consensus 731 ~~~~~~~e----~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~Y 806 (1124)
.++..+.+ .....++++||+|++|++|+.. +.+|. +....+.++++||++|+||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~-~~~~~-------------------~~~~~~~~~l~eA~~V~sC~Y 720 (1040)
T PLN02189 661 ALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLM-EEGGV-------------------PPSSSPAALLKEAIHVISCGY 720 (1040)
T ss_pred cccccchhhhhhhhhhhhHhhhccchhhhhhhhh-hhcCC-------------------CCCCCcHHHHHHHHHhhcccc
Confidence 01101111 1123578899999999999964 33332 122346789999999999999
Q ss_pred ccccccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhcccccc-
Q 042084 807 EDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLA- 885 (1124)
Q Consensus 807 E~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~- 885 (1124)
|++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++|+||++.
T Consensus 721 E~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g 800 (1040)
T PLN02189 721 EDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYG 800 (1040)
T ss_pred ccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred --ccccchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 042084 886 --SRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEE 963 (1124)
Q Consensus 886 --~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~ 963 (1124)
.++|+++|||+|+++++||++++|+++|+++|++||++|++++|..+...+++++.++++++++.++|++|+|+++++
T Consensus 801 ~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~ 880 (1040)
T PLN02189 801 YKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEE 880 (1040)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 367999999999999999999999999999999999999999998766666666677788899999999999999999
Q ss_pred hhchhhHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHH
Q 042084 964 WWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAF 1043 (1124)
Q Consensus 964 wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv 1043 (1124)
|||+||||+|+++++|++|++++++|+|++++++|.||+|..+++ .++++|+|+||++++|+++|+++|++|+++|+
T Consensus 881 WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~---~~~~ly~f~~s~l~iP~ttl~i~Nlvaiv~g~ 957 (1040)
T PLN02189 881 WWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDD---EFGELYAFKWTTLLIPPTTLLIINIVGVVAGI 957 (1040)
T ss_pred HhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccc---ccccceeecceeHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987643 56899999999999999999999999999999
Q ss_pred HHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhheecCCCCC
Q 042084 1044 LRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGST 1113 (1124)
Q Consensus 1044 ~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv~i~~~~~~ 1113 (1124)
++++++++..|+.+++++|+++|+++|+|||+||||||+||+|+||+|||++++++||||||+|+||+..
T Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v~s~ll~~~~~l~~v~~~~~~~~ 1027 (1040)
T PLN02189 958 SDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLK 1027 (1040)
T ss_pred HHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHheecccccC
Confidence 9999877778999999999999999999999999999999999999999999999999999999999965
No 7
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.4e-259 Score=2299.82 Aligned_cols=893 Identities=49% Similarity=0.915 Sum_probs=782.7
Q ss_pred CCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-CCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 042084 127 GAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT-GLCPGCKEPYKLGDYDDEIPDFSSGALPLPAP 204 (1124)
Q Consensus 127 ~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r~d~~~~~~~~~~~~~~~~~~ 204 (1124)
..++|+||| |||+||+|++||+|||| ||+|||||+||||||||| |+||||||+||+ ||+.||.+++++-..
T Consensus 3 ~~~~~~c~~--cgd~~~~~~~g~~fvaC~eC~~pvCrpCyeyer~eg~q~CpqCkt~Yk~----~~~~~d~~~~~~~~~- 75 (977)
T PLN02195 3 ESGAPICAT--CGEEVGVDSNGEAFVACHECSYPLCKACLEYEIKEGRKVCLRCGGPYDA----ENVFDDVETKHSRNQ- 75 (977)
T ss_pred cCCCcccee--cccccCcCCCCCeEEEeccCCCccccchhhhhhhcCCccCCccCCcccc----ccccchhhhhhccch-
Confidence 467899999 99999999999999999 999999999999999999 999999999993 222333222221110
Q ss_pred CCCC-CCCcccccccCCCCCCCCCc--cccc---CCcCCCccccccCCCCCCCCC----------------CCCCC--CC
Q 042084 205 NKDG-GNSNMTMMKRNQNGEFDHNR--WLFE---TKGTYGYGNAFWPQDDMYGDD----------------GEDGF--KG 260 (1124)
Q Consensus 205 ~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~g~~~w~~~~~~~~~----------------~~~~~--~~ 260 (1124)
..+. +|+. ++..+ .|++ .+.. .+-.-+|||++||||++.++. ++.+. +.
T Consensus 76 ~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~wk~r~~~wk~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (977)
T PLN02195 76 STMASHLND------TQDVG-IHARHISSVSTVDSELNDEYGNPIWKNRVESWKDKKNKKKKSAKKKEAHKAQIPPEQQM 148 (977)
T ss_pred hhhhhhccc------CcCCC-CCCccccccccCCCcccCccCCHHHHHHHHHHHHhhhhhccccccccccccCCCCccCC
Confidence 0010 2221 11100 1111 1111 111125999999999983211 01001 11
Q ss_pred CCCCCCCCCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhhccccc
Q 042084 261 GMPDNSDKPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLF 340 (1124)
Q Consensus 261 ~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~lw~~~~~~E~wf~f~wlL~q~~kw~ 340 (1124)
++.++ |+.++||+||++|++++|+|||+++++||++|++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+
T Consensus 149 ~~~~~-~~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~ 227 (977)
T PLN02195 149 EEKPS-ADAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWS 227 (977)
T ss_pred ccccc-ccccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 23454 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhH
Q 042084 341 PVNRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTF 420 (1124)
Q Consensus 341 Pi~R~t~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf 420 (1124)
||+|+||+|||++||++|+ ++++||+||||||||||.||||++|+||||||||+|||+|||+|||||||||+|||
T Consensus 228 Pv~R~t~~drL~~r~~~~~-----~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf 302 (977)
T PLN02195 228 PINRETYIDRLSARYEREG-----EPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSF 302 (977)
T ss_pred cccceECHHHHHHHhccCC-----CcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHH
Confidence 9999999999999998653 57999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccch
Q 042084 421 EAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNA 500 (1124)
Q Consensus 421 ~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~ 500 (1124)
|||.|||+|||+||||||||||||||||+||++|.++++++++|+|++|||+|||||||||+|||+|++
T Consensus 303 ~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~----------- 371 (977)
T PLN02195 303 ESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVA----------- 371 (977)
T ss_pred HHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccccc-ccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccc
Q 042084 501 REEMKMIKHMREGGADPTEPIKVQKATW-MADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDF 579 (1124)
Q Consensus 501 ~ee~~~~~~~~~~~~~~~~~~~~p~~~w-m~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~ 579 (1124)
++.++|+++| |+|||+|||+| ++|||+||||||++++. .|+
T Consensus 372 ------------------~~~~~~~~~~~m~d~t~W~g~~--------~~dHp~IIqVll~~~~~------------~d~ 413 (977)
T PLN02195 372 ------------------KAQKTPEEGWTMQDGTPWPGNN--------TRDHPGMIQVFLGETGA------------RDI 413 (977)
T ss_pred ------------------hcccCCcccccccCCccCCCCC--------CCCCcchhhhhccCCCC------------ccc
Confidence 2347788888 99999999996 68999999999987621 234
Q ss_pred cccccCCCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhcc-CCCcEEEE
Q 042084 580 TDVDIRLPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDK-GGEDICYI 658 (1124)
Q Consensus 580 ~~~~~~lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp-~g~~vafV 658 (1124)
+|+ +||+|||||||||||++||+||||||+|+||||+|||||||||||||||+|||++||+|||||+|| .|+++|||
T Consensus 414 ~g~--~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~V 491 (977)
T PLN02195 414 EGN--ELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYV 491 (977)
T ss_pred ccc--cCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEE
Confidence 443 799999999999999999999999999999999999999999999999999999999999999999 68899999
Q ss_pred ccCccccCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCC------------CCccc
Q 042084 659 QFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQ------------NKDTE 726 (1124)
Q Consensus 659 QfPQ~F~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~------------~~~~~ 726 (1124)
||||+|+|++++|+|+|++++||+++|+|+||+|||+||||||+|||+||||++||+..+.++ .++.+
T Consensus 492 Q~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (977)
T PLN02195 492 QFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPE 571 (977)
T ss_pred cCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999987521110 00000
Q ss_pred ----------------cccCCCCCCCc----c----ccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCC
Q 042084 727 ----------------MHALNPTDFDS----D----LDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGA 782 (1124)
Q Consensus 727 ----------------~~~~~~~~~~~----e----~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~ 782 (1124)
.+...+++.++ | .....++++||+|++|++|+ +.+.+|.+.
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~-~~~~~~~~~-------------- 636 (977)
T PLN02195 572 QDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIEST-LMENGGVPE-------------- 636 (977)
T ss_pred ccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHH-HHHhcCCCC--------------
Confidence 01111111110 1 11235789999999999999 467666432
Q ss_pred CCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHH
Q 042084 783 LRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRL 862 (1124)
Q Consensus 783 ~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l 862 (1124)
.+.++++++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++
T Consensus 637 -----~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L 711 (977)
T PLN02195 637 -----SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRL 711 (977)
T ss_pred -----CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHH
Confidence 234678999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred HHhhhhhcchhHHHhhhcccccc---ccccchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHH
Q 042084 863 HQVLRWATGSVEIFFSRNNAFLA---SRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYL 939 (1124)
Q Consensus 863 ~QR~RWA~G~lQIl~sk~~pLl~---~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliyl 939 (1124)
.||+|||+|++||+++|++|++. .++|+++|||+|+++++||++++++++|+++|++||++|++++|..+..+++++
T Consensus 712 ~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f 791 (977)
T PLN02195 712 HQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLF 791 (977)
T ss_pred HHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHH
Confidence 99999999999999999999975 378999999999999999999999999999999999999999998776566666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCcccccceEEe
Q 042084 940 LIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYVV 1019 (1124)
Q Consensus 940 lp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~f 1019 (1124)
+.+|+++++++++|++|+|+++++||||||||+|++||+|++|++++++|+|++++++|+||+|..++ +.++++|+|
T Consensus 792 ~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd---~~~~~~Y~f 868 (977)
T PLN02195 792 LGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADD---TEFGELYMV 868 (977)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccc---cchhcceec
Confidence 67888999999999999999999999999999999999999999999999999999999999998764 367899999
Q ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHH
Q 042084 1020 KWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAIT 1099 (1124)
Q Consensus 1020 ~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~ 1099 (1124)
+||++++|+++++++||+|+++|++++++++++.|+.+++++|+++|+++|+|||+||||||+||+|+||+|||++++++
T Consensus 869 ~~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v~s~ll~~~ 948 (977)
T PLN02195 869 KWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASV 948 (977)
T ss_pred cceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHH
Confidence 99999999999999999999999999998877789999999999999999999999999999999999999999999999
Q ss_pred HHHhhheecCCCCC
Q 042084 1100 LSLLWMAISPPGST 1113 (1124)
Q Consensus 1100 ~~llwv~i~~~~~~ 1113 (1124)
||||||+|+||+..
T Consensus 949 ~~l~~v~~~~~~~~ 962 (977)
T PLN02195 949 FSLVWVKINPFVGK 962 (977)
T ss_pred HHHHHeeccccccC
Confidence 99999999999965
No 8
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=4.8e-209 Score=1828.96 Aligned_cols=670 Identities=58% Similarity=1.051 Sum_probs=621.0
Q ss_pred ccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCCCCcccc
Q 042084 372 IDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPDSYF 451 (1124)
Q Consensus 372 VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR~Pe~YF 451 (1124)
||||||||||.||||++|+||||||||+|||+|||+|||||||||+||||||.|||+|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHHHHhhhcCCCCCCCccccccccc-cc
Q 042084 452 SLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQKATW-MA 530 (1124)
Q Consensus 452 s~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~~p~~~w-m~ 530 (1124)
+++.++++++.+++|++||++|||||||||+|||++++. ..++|+++| |+
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~-----------------------------~~~~~~~~~~~~ 131 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAK-----------------------------IQKVPEEGWTMQ 131 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhh-----------------------------hhcccccceecc
Confidence 999999999999999999999999999999999998642 346899999 99
Q ss_pred CCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCchhHHH
Q 042084 531 DGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKKAGAMN 610 (1124)
Q Consensus 531 dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~KAGALN 610 (1124)
|||+|||+ +++|||+||||+++++++++ .+|. +||+||||||||||+++||+||||||
T Consensus 132 ~~~~w~~~--------~~~dH~~iiqv~~~~~~~~~------------~~g~--~lP~lvYvsREKrp~~~Hh~KAGAmN 189 (720)
T PF03552_consen 132 DGTPWPGN--------TRRDHPGIIQVLLDNPGGKD------------VDGN--ELPMLVYVSREKRPGYPHHFKAGAMN 189 (720)
T ss_pred CCCcCCCC--------CCcCChhheEeeccCCCCcc------------cccC--cCCeEEEEeccCCCCCCchhhhcccc
Confidence 99999994 79999999999999874332 2222 79999999999999999999999999
Q ss_pred HHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccC-CCcEEEEccCccccCCCcchhhHHHHHHHHhhHHHHhh
Q 042084 611 ALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKG-GEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALD 689 (1124)
Q Consensus 611 allRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~-g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~~~glD 689 (1124)
+|+||||+|||||||||||||||+|||+++|+||||||||+ |+++|||||||+|+|+++||+|+|++++||+++|+|+|
T Consensus 190 aL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~d 269 (720)
T PF03552_consen 190 ALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLD 269 (720)
T ss_pred cccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeeccccccc
Confidence 99999999999999999999999999999999999999995 99999999999999999999999999999999999999
Q ss_pred hcCCcccccccceeehhhhcCCCCCCCCCCCC------------CCc----------------cccccCCCCCCCcc---
Q 042084 690 GLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQ------------NKD----------------TEMHALNPTDFDSD--- 738 (1124)
Q Consensus 690 GlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~------------~~~----------------~~~~~~~~~~~~~e--- 738 (1124)
|+|||+|+||||+|||+||||++||...+..+ +++ +..+++.+++.++.
T Consensus 270 G~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (720)
T PF03552_consen 270 GLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIEEGAEG 349 (720)
T ss_pred cCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhcccccccccccccccccccccccc
Confidence 99999999999999999999999998644321 110 11234444443331
Q ss_pred --------ccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccccccccc
Q 042084 739 --------LDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKT 810 (1124)
Q Consensus 739 --------~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T 810 (1124)
.+..+++++||+|++|++|+.. +.++ +++++.++++++||++|+||+||++|
T Consensus 350 ~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~-~~~~-------------------~~~~~~~~~~L~EA~~V~sC~YE~~T 409 (720)
T PF03552_consen 350 SDEERSSLMSQKELEKKFGQSPEFIASTLM-AQGG-------------------VPRSPSPASLLEEAIHVASCGYEDKT 409 (720)
T ss_pred chhhhhhcchhHHHHHHhcCCHHHHHHHHH-HhcC-------------------CCCCCChHHHHHHHHHHhcCCccccC
Confidence 2335689999999999999953 3332 34555678999999999999999999
Q ss_pred ccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccc--cc
Q 042084 811 EWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLAS--RK 888 (1124)
Q Consensus 811 ~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~--~~ 888 (1124)
+||+||||.|+|+|||+.||++||++||||+||+|++++|.|.||+||.+.|.|++|||.|++||+++||||+|.+ ++
T Consensus 410 ~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~r 489 (720)
T PF03552_consen 410 EWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGR 489 (720)
T ss_pred CcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975 89
Q ss_pred cchhcchhhhhchhhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchh
Q 042084 889 LKLLQRLAYLNVGIYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNE 968 (1124)
Q Consensus 889 L~l~QRL~Yl~~~lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~q 968 (1124)
|+++|||+|++.++||++|+|+++|+++|++||++|++++|+.+..++++++++++++++++++|++|+|+++++|||+|
T Consensus 490 L~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQ 569 (720)
T PF03552_consen 490 LKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQ 569 (720)
T ss_pred CcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhccc
Confidence 99999999999999999999999999999999999999999988777788888899999999999999999999999999
Q ss_pred hHHHhhhhHHHHHHHHHHHHHHHhccccceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHh
Q 042084 969 QFWVIGGTSAHFAAVIQGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIY 1048 (1124)
Q Consensus 969 r~W~I~~tsa~l~Av~~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~ 1048 (1124)
|||+|+++++|++|++++++|+|++++++|+||+|+.++ ++++|+|+|+|+||++++|+++|+++||+|+++|++++++
T Consensus 570 q~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dd-e~~~~~ely~f~wS~LfiP~tTllilNLva~v~Gi~r~i~ 648 (720)
T PF03552_consen 570 QFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDD-EDDKYAELYIFKWSPLFIPPTTLLILNLVAFVVGISRAIN 648 (720)
T ss_pred ceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccc-ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999998874 4567889999999999999999999999999999999998
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhheecCCCCC
Q 042084 1049 ATNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGST 1113 (1124)
Q Consensus 1049 ~~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv~i~~~~~~ 1113 (1124)
+++++|+++++++|+++||++|+|||+||||+|++|+|+||++||++|+++|+||||+||||+..
T Consensus 649 ~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~r~P~~v~v~S~lla~i~~llwv~i~~~~~~ 713 (720)
T PF03552_consen 649 SGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKDRIPTSVIVWSVLLASIFSLLWVRIDPFLAK 713 (720)
T ss_pred cCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccCCcceeehHHHHHHHHHHHHHheecccCcCC
Confidence 88888999999999999999999999999999999999999999999999999999999999986
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=4.6e-206 Score=1807.00 Aligned_cols=723 Identities=31% Similarity=0.573 Sum_probs=638.4
Q ss_pred CCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHhhcccccccccCCch
Q 042084 269 PWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDAIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDL 348 (1124)
Q Consensus 269 ~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~ 348 (1124)
...||.+++++++.+ ||++.+++++++++||+||++|++.++ ++|+++++||+||+|+|+|+|++||+|++|.|+|
T Consensus 7 ~~~pL~~~~~~~~~~---~r~~~~~vl~~~~~~l~~R~~~~~~~~-~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~~p 82 (756)
T PLN02190 7 SLPPLCERISHKSYF---LRAVDLTILGLLFSLLLYRILHMSEND-TVWLVAFLCESCFSFVWLLITCIKWSPAEYKPYP 82 (756)
T ss_pred CCCCceeeeeccchh---HHHHHHHHHHHHHHHHHHHHhCCCccc-HHHHHHHHHHHHHHHHHHHhccceeeecCCCCCc
Confidence 457899999999996 899999999999999999999997776 6899999999999999999999999999999999
Q ss_pred hHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHh
Q 042084 349 EVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAAS 428 (1124)
Q Consensus 349 ~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~ 428 (1124)
++|++||+ +||+||||||||||.||||++|+||||||||+|||+|||+|||||||||+||||||.|||+
T Consensus 83 ~~l~~r~~-----------~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~ 151 (756)
T PLN02190 83 DRLDERVH-----------DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASK 151 (756)
T ss_pred HHHHHhhc-----------cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHH
Confidence 99999972 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHHHH
Q 042084 429 FADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIK 508 (1124)
Q Consensus 429 FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~ 508 (1124)
|||+||||||||||||||||+||+++. +++.+++|++||++|||||||||+|||+++
T Consensus 152 FA~~WvPFCrK~~IepRaPe~YF~~~~---~~~~~~~f~~e~~~~K~eYee~k~ri~~a~-------------------- 208 (756)
T PLN02190 152 FAKIWVPFCKKYNVRVRAPFRYFLNPP---VATEDSEFSKDWEMTKREYEKLSRKVEDAT-------------------- 208 (756)
T ss_pred HHhhhcccccccCCCcCCHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHHhhc--------------------
Confidence 999999999999999999999999754 333558999999999999999999998652
Q ss_pred hhhcCCCCCCCcccccccccccCCCCCCC--CcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCC
Q 042084 509 HMREGGADPTEPIKVQKATWMADGTHWPG--TWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRL 586 (1124)
Q Consensus 509 ~~~~~~~~~~~~~~~p~~~wm~dgt~wpg--~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~l 586 (1124)
++++|++ +|..+.++++++|||+|||||+++++. .++ +.+|
T Consensus 209 ----------------------~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~------~~~---------~~~l 251 (756)
T PLN02190 209 ----------------------GDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGG------VGD---------EKEV 251 (756)
T ss_pred ----------------------cCCCCcccCCcccccCCCCCCCCccceEEEecCCCC------ccc---------cccC
Confidence 2355665 355666789999999999999998621 112 2389
Q ss_pred CcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccC--CCcEEEEccCccc
Q 042084 587 PLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKG--GEDICYIQFPQRF 664 (1124)
Q Consensus 587 P~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~--g~~vafVQfPQ~F 664 (1124)
|+|||||||||||++||+||||||+|+||||+|||||||||||||||+|||+++|+|||||||+. ++++|||||||+|
T Consensus 252 P~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F 331 (756)
T PLN02190 252 PHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEF 331 (756)
T ss_pred ceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999983 4589999999999
Q ss_pred cCCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcc-ccccc
Q 042084 665 EGIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSD-LDVNL 743 (1124)
Q Consensus 665 ~nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~ 743 (1124)
+ |+|+||++|||+++++|+||+|||+|+||||+|||+||||++||+.++..+..... +.+ .....
T Consensus 332 ~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~---------~~~~~~~~~ 397 (756)
T PLN02190 332 Y-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVA---------TREFLAEDS 397 (756)
T ss_pred c-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccc---------cccccchhh
Confidence 8 78999999999999999999999999999999999999999998765432111100 001 11223
Q ss_pred cccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcc
Q 042084 744 LPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSV 823 (1124)
Q Consensus 744 ~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSV 823 (1124)
++++||+|++|++|+. .++++.+ .|+. ...++++||++|+||+||++|+||+||||.|+|+
T Consensus 398 ~~~~fg~s~~f~~s~~-~~~~~~~----------~~~~--------~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSi 458 (756)
T PLN02190 398 LAREFGNSKEMVKSVV-DALQRKP----------NPQN--------SLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSV 458 (756)
T ss_pred hhhhcCCcHHHHHHHH-HHhccCC----------CCcc--------chHHHHHHHHhhcccCCCCCCchhhccCccccee
Confidence 6789999999999994 4444321 1111 1247999999999999999999999999999999
Q ss_pred cchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhcccccc--ccccchhcchhhhhch
Q 042084 824 TEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLA--SRKLKLLQRLAYLNVG 901 (1124)
Q Consensus 824 TEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~--~~~L~l~QRL~Yl~~~ 901 (1124)
|||+.||++||++||||+||+|++++|.|++|+++.++++||+|||.|++||+++|+||++. .++|+++|||+|++.+
T Consensus 459 tED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~ 538 (756)
T PLN02190 459 AEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVF 538 (756)
T ss_pred echHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999986 4899999999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHH
Q 042084 902 IYPFTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFA 981 (1124)
Q Consensus 902 lypl~sl~~LiylllP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~ 981 (1124)
+ |++++|+++|+++|++||++|++++|.. .+++ +++.+++++++++++|++|+|+++++||||||||+|+++|+|++
T Consensus 539 ~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~-~~~~-~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~ 615 (756)
T PLN02190 539 T-CLRSIPELIYCLLPAYCLLHNSALFPKG-VYLG-IIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLF 615 (756)
T ss_pred H-HHHHHHHHHHHHHHHHHHHcCCccccCc-cHHH-HHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHH
Confidence 8 9999999999999999999999999975 3343 33345667888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccceEeCcCCCC-------------CCCcccc-cceEEeecccchHHHHHHHHHHHHHHHHHHHHHH
Q 042084 982 AVIQGLLKVMAGIEISFTLTTKSAA-------------EDNDDIY-ADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTI 1047 (1124)
Q Consensus 982 Av~~aLLk~Lgg~k~sF~VTpK~~~-------------~d~~~~y-ael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i 1047 (1124)
|++++++|+|++++++|+||+|..+ +++++.| +++|+|+||++++|+++++++|++|+++|+++++
T Consensus 616 a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~S~lfiP~tti~~~Nl~a~~~g~~~~~ 695 (756)
T PLN02190 616 SIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFDGSLYFLPGTFIVLVNLAALAGFLVGLQ 695 (756)
T ss_pred HHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEecceehHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999653 2223343 5899999999999999999999999998888765
Q ss_pred hc---cCCCchhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCccchHHHHHHHHHHHHHHh
Q 042084 1048 YA---TNPSWSKFIGGAFFSFWVLAHLYPFAKGLMGR-RGKTPTIVFVWSGLIAITLSLL 1103 (1124)
Q Consensus 1048 ~~---~~~~w~~l~g~l~~~fWvl~nL~Pf~kgL~gR-kgr~P~~v~~~s~l~~~~~~ll 1103 (1124)
.. ..+.|+. ++++++++|+++|++||+||||+| ||+||.+|+++|++|+.+|..+
T Consensus 696 ~~~~s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~~kdkg~iP~s~~~~s~~l~~~f~~~ 754 (756)
T PLN02190 696 RSSYSHGGGGSG-LAEACGCILVVMLFLPFLKGLFEKGKYGIPLSTLSKAAFLAVLFVVF 754 (756)
T ss_pred hhhhccCccccc-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhc
Confidence 42 2234554 499999999999999999999965 5789999999999888877543
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.5e-197 Score=1742.93 Aligned_cols=713 Identities=32% Similarity=0.595 Sum_probs=639.8
Q ss_pred CCCCCCceeeccCcccccchhHHHHHHHHHHHHHHHhhhcCCCCch-hHHHHHHHHHHHHHHHHHHHhhcccccccccCC
Q 042084 268 KPWKPLSRTLPIPAAIISPYRLFIAIRFVILGFFLHWRVVNPNTDA-IWLWLMSVSCEIWFAFSWILDQFPKLFPVNRST 346 (1124)
Q Consensus 268 ~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~~Ri~~~~~~a-~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t 346 (1124)
....||.++++++++++ ||+++++++++|+++|+||++|.+.+. .|+|+++++||+||+|+|+|+|++||+||+|.|
T Consensus 9 ~~~~pL~~~~~~~~~~~--~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~ 86 (734)
T PLN02893 9 TGAPPLHTCHPMRRTIA--NRVFAVVYSCAILALLYHHVIALLHSTTTLITLLLLLADIVLAFMWATTQAFRMCPVHRRV 86 (734)
T ss_pred CCCCCceeeeecCCchH--HHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 35678999999998875 999999999999999999999987654 899999999999999999999999999999999
Q ss_pred chhHHhhhcCCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHH
Q 042084 347 DLEVLRDKFDMPSPSNPTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEA 426 (1124)
Q Consensus 347 ~~~~L~~r~~~~~~~~~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Ea 426 (1124)
|+|||+++++ .++||+||||||||||.||||++|+||||||||+|||+|||+|||||||||+||||||.||
T Consensus 87 ~~~~L~~~~~---------~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Ea 157 (734)
T PLN02893 87 FIEHLEHYAK---------ESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEA 157 (734)
T ss_pred CHHHHhhhcc---------cccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHH
Confidence 9999997764 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhcCCCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHH
Q 042084 427 ASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKM 506 (1124)
Q Consensus 427 a~FA~~WvPFCrk~~IepR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~ 506 (1124)
|+|||+||||||||||||||||+||+++. ++|++||++|||||||||+|||++++.++++++.++..+|.+
T Consensus 158 a~FA~~WvPFCrk~~ie~R~P~~YF~~~~--------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~- 228 (734)
T PLN02893 158 AKFATHWLPFCKKNKIVERCPEAYFSSNS--------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQERE- 228 (734)
T ss_pred HHHHHhhcccccccCCCcCCHHHHhccCC--------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhccccc-
Confidence 99999999999999999999999999872 468899999999999999999999998887777655444310
Q ss_pred HHhhhcCCCCCCCcccccccccccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCC
Q 042084 507 IKHMREGGADPTEPIKVQKATWMADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRL 586 (1124)
Q Consensus 507 ~~~~~~~~~~~~~~~~~p~~~wm~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~l 586 (1124)
..+.|+ ++++++|||+||||+++++++ .|++|+ +|
T Consensus 229 ------------------------~f~~w~-------~~~~~~dH~~ivqV~l~~~~~------------~d~~g~--~l 263 (734)
T PLN02893 229 ------------------------AFSRWT-------DKFTRQDHPTVIQVLLESGKD------------KDITGH--TM 263 (734)
T ss_pred ------------------------ccccCc-------CCCCCCCCCceeeeeccCCCc------------cchhhc--cC
Confidence 112343 368899999999999998732 244443 79
Q ss_pred CcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhcc-CCCcEEEEccCcccc
Q 042084 587 PLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDK-GGEDICYIQFPQRFE 665 (1124)
Q Consensus 587 P~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp-~g~~vafVQfPQ~F~ 665 (1124)
|+|||||||||||++||+||||||+++||||+|||||||||||||||+|||++||+|||||+|| .++++|||||||+|+
T Consensus 264 P~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~ 343 (734)
T PLN02893 264 PNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFH 343 (734)
T ss_pred CceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 478999999999999
Q ss_pred CCCcchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccc
Q 042084 666 GIDPSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLP 745 (1124)
Q Consensus 666 nid~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 745 (1124)
|++++|+|+|++++||+++|+|+||+|||+||||||+|||+||||..+ .... ++.
T Consensus 344 ~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~-~~~~------------------~~~------ 398 (734)
T PLN02893 344 GINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPS-SLIL------------------PEI------ 398 (734)
T ss_pred CCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCc-cccc------------------hhh------
Confidence 999999999999999999999999999999999999999999999632 1000 000
Q ss_pred cccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccc
Q 042084 746 KRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTE 825 (1124)
Q Consensus 746 ~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTE 825 (1124)
..++++.... +...+.++++||++|+||+||++|+||++|||.|+|+||
T Consensus 399 ~~~~~~~~~~-------------------------------~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtE 447 (734)
T PLN02893 399 PELNPDHLVD-------------------------------KSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVE 447 (734)
T ss_pred hhcccccccc-------------------------------cccchHHHHHHhhhccccccccCCccccccceEeccccc
Confidence 0111111111 111245789999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhcccccc-ccccchhcchhhhhchhhh
Q 042084 826 DVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLA-SRKLKLLQRLAYLNVGIYP 904 (1124)
Q Consensus 826 Di~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~-~~~L~l~QRL~Yl~~~lyp 904 (1124)
|+.||++||++||||+||+|++++|.|++|+|+.++++||+|||.|++||+++|+||++. .++|+++|||+|++.++||
T Consensus 448 D~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~ 527 (734)
T PLN02893 448 DYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP 527 (734)
T ss_pred cHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999998899999999999999999999999999999999999975 4899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHH
Q 042084 905 FTSLFLIVYCFLPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVI 984 (1124)
Q Consensus 905 l~sl~~LiylllP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~ 984 (1124)
++++|+++|+++|++||++|++++|+.+..++++++++++++++++++|++|+|.++++|||+||+|+|.++++|++|++
T Consensus 528 ~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l 607 (734)
T PLN02893 528 IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLV 607 (734)
T ss_pred HhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHH
Confidence 99999999999999999999999998755444444467788888999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccceEeCcCCCCCCCccccc-ceEEeec-ccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 042084 985 QGLLKVMAGIEISFTLTTKSAAEDNDDIYA-DLYVVKW-TSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAF 1062 (1124)
Q Consensus 985 ~aLLk~Lgg~k~sF~VTpK~~~~d~~~~ya-el~~f~w-s~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~ 1062 (1124)
++++|.|++++++|+||+|+.+++..++|+ ++|+|+| +++++|+++++++|++|+++|+++++.+. .|+.++++++
T Consensus 608 ~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~--~~~~~~~~~~ 685 (734)
T PLN02893 608 EFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQR--NLEGLFLQMF 685 (734)
T ss_pred HHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCC--chhHHHHHHH
Confidence 999999999999999999998776667786 8999996 78899999999999999999999988763 5677789999
Q ss_pred HHHHHHHHHHHHHHHHhccC--CCccchHHHHHHHHHHHHHHh
Q 042084 1063 FSFWVLAHLYPFAKGLMGRR--GKTPTIVFVWSGLIAITLSLL 1103 (1124)
Q Consensus 1063 ~~fWvl~nL~Pf~kgL~gRk--gr~P~~v~~~s~l~~~~~~ll 1103 (1124)
+++|++++++||++||++|+ ||||++|++||++|+.++.++
T Consensus 686 ~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~ 728 (734)
T PLN02893 686 LAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLA 728 (734)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHH
Confidence 99999999999999999996 589999999999999877654
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.5e-62 Score=599.65 Aligned_cols=493 Identities=25% Similarity=0.378 Sum_probs=386.5
Q ss_pred hHHHHH-HHHHHHHHHHhhhcCC-CCchh---HHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCC
Q 042084 288 RLFIAI-RFVILGFFLHWRVVNP-NTDAI---WLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSN 362 (1124)
Q Consensus 288 R~~~~~-~lv~l~~~l~~Ri~~~-~~~a~---~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~ 362 (1124)
|++.++ -+++.+.|++||++++ |.+.. -+.++++++|+++.++.++..+..+.|.+|.+.+ .
T Consensus 57 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~-------------~ 123 (713)
T TIGR03030 57 RLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVP-------------L 123 (713)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccC-------------C
Confidence 554444 4555689999999987 44433 2677899999999999999888888888776421 1
Q ss_pred CCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcC
Q 042084 363 PTGRSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNI 442 (1124)
Q Consensus 363 ~~~~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~I 442 (1124)
|..++.+|.|||+|+|| +|++.++.+|+.|++++|||.+|+.|||.|||+..=|..
T Consensus 124 ~~~~~~~P~VsViIP~y---NE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~--------------------- 179 (713)
T TIGR03030 124 PLDPEEWPTVDVFIPTY---NEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRN--------------------- 179 (713)
T ss_pred CCCcccCCeeEEEEcCC---CCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccc---------------------
Confidence 12246799999999999 999999999999999999999999999999998662110
Q ss_pred CCCCCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHHHHhhhcCCCCCCCccc
Q 042084 443 EPRNPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIK 522 (1124)
Q Consensus 443 epR~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~ 522 (1124)
++ ++...|. ++..++++ ++.
T Consensus 180 -------------~~------~~~~~~~---~~~~~~~~----~l~---------------------------------- 199 (713)
T TIGR03030 180 -------------DP------DPEQAEA---AQRREELK----EFC---------------------------------- 199 (713)
T ss_pred -------------cc------hhhhhhh---hhhHHHHH----HHH----------------------------------
Confidence 00 0000000 00001111 110
Q ss_pred ccccccccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCC
Q 042084 523 VQKATWMADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEH 602 (1124)
Q Consensus 523 ~p~~~wm~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H 602 (1124)
.++ .+.|+.|+++ +
T Consensus 200 -------------------------------------------------------------~~~-~v~yi~r~~n----~ 213 (713)
T TIGR03030 200 -------------------------------------------------------------RKL-GVNYITRPRN----V 213 (713)
T ss_pred -------------------------------------------------------------HHc-CcEEEECCCC----C
Confidence 011 2789999885 5
Q ss_pred CCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcc-------hhhHH
Q 042084 603 NKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPS-------DRYAN 675 (1124)
Q Consensus 603 ~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~-------D~yan 675 (1124)
|+||||||++++. ++||||+++|||+++ +|++|++++++|.+ ++++|+||+||.|+|.++. +++.+
T Consensus 214 ~~KAgnLN~al~~----a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~--dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~ 286 (713)
T TIGR03030 214 HAKAGNINNALKH----TDGELILIFDADHVP-TRDFLQRTVGWFVE--DPKLFLVQTPHFFVSPDPIERNLGTFRRMPN 286 (713)
T ss_pred CCChHHHHHHHHh----cCCCEEEEECCCCCc-ChhHHHHHHHHHHh--CCCEEEEeCCeeccCCCHHhhhhHHHHHhhh
Confidence 6899999999986 689999999999999 69999999999963 2499999999999987753 34467
Q ss_pred HHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhh
Q 042084 676 NNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLA 755 (1124)
Q Consensus 676 ~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~ 755 (1124)
++..||..++.|+|.+++++++||++++||+||..
T Consensus 287 e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~--------------------------------------------- 321 (713)
T TIGR03030 287 ENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDE--------------------------------------------- 321 (713)
T ss_pred HHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHH---------------------------------------------
Confidence 78899999999999999999999999999999964
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHh
Q 042084 756 ESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHN 835 (1124)
Q Consensus 756 ~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~ 835 (1124)
+| ||.++++|||++++++||+
T Consensus 322 -------iG----------------------------------------------------Gf~~~~vtED~~l~~rL~~ 342 (713)
T TIGR03030 322 -------IG----------------------------------------------------GIAGETVTEDAETALKLHR 342 (713)
T ss_pred -------cC----------------------------------------------------CCCCCCcCcHHHHHHHHHH
Confidence 23 6777899999999999999
Q ss_pred CCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchhhhhhHHHHHHHHH
Q 042084 836 RGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCF 915 (1124)
Q Consensus 836 rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~lypl~sl~~Liyll 915 (1124)
+||+++|++ .+.+.|++|+|++++++||.||++|++|+++. .+|++ .+++++.||++|+++++||+.+++.++|++
T Consensus 343 ~G~~~~y~~--~~~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~~-~~pl~-~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~ 418 (713)
T TIGR03030 343 RGWNSAYLD--RPLIAGLAPETLSGHIGQRIRWAQGMMQIFRL-DNPLL-KRGLSFPQRLCYLNAMLFWFFPLPRVIFLT 418 (713)
T ss_pred cCCeEEEec--cccccccCCCCHHHHHHHHHHHhcChHHHHhh-hCccc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999995 35568999999999999999999999999985 47876 689999999999999999999999999999
Q ss_pred HHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccc
Q 042084 916 LPALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIE 995 (1124)
Q Consensus 916 lP~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k 995 (1124)
+|+++|++|+.++++....++.|++|+++...+.. ....|.....||+ | ++.+....+.+...+.+.+++++
T Consensus 419 ~P~~~l~~~~~~~~~~~~~~~~~~lp~~~~~~~~~---~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~ 490 (713)
T TIGR03030 419 APLAYLFFGLNIFVASALEILAYALPHMLHSLLTN---SYLFGRVRWPFWS-E----VYETVLAVYLLPPVLVTLLNPKK 490 (713)
T ss_pred HHHHHHHhCCcceeCCHHHHHHHHHHHHHHHHHHH---HHHcCCeecchHH-H----HHHHHHHHHHHHHHHHHHhCcCC
Confidence 99999999999999887888888888776544321 2234555566885 3 33333444556666677788899
Q ss_pred cceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 042084 996 ISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFA 1075 (1124)
Q Consensus 996 ~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~ 1075 (1124)
.+|+||+|+...+. .+ + +.++.|+++++++|++|+++|+++....+. ...+.+++.+|.++|++-+.
T Consensus 491 ~~F~VT~Kg~~~~~--~~-----~--~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~n~~~~~ 557 (713)
T TIGR03030 491 PKFNVTPKGELLDE--DY-----F--SPLSRPYLILFALILAGLAFGLYRIYGYPI----ERGVLLVVLGWNLLNLILLG 557 (713)
T ss_pred CCceecCCCccccc--cc-----c--chHHHHHHHHHHHHHHHHHHHHHHHhcCcc----ccchhhHHHHHHHHHHHHHH
Confidence 99999999875431 11 1 357899999999999999999999754321 12345789999999999888
Q ss_pred HHHh
Q 042084 1076 KGLM 1079 (1124)
Q Consensus 1076 kgL~ 1079 (1124)
-++.
T Consensus 558 ~~~~ 561 (713)
T TIGR03030 558 AALA 561 (713)
T ss_pred HHHH
Confidence 7774
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.2e-62 Score=599.89 Aligned_cols=474 Identities=25% Similarity=0.428 Sum_probs=378.0
Q ss_pred HHHHHHHHHHHHHHhhhcCC-CCc---hhHHHHHHHHHHHHHHHHHHHhhcccccccccCCchhHHhhhcCCCCCCCCCC
Q 042084 290 FIAIRFVILGFFLHWRVVNP-NTD---AIWLWLMSVSCEIWFAFSWILDQFPKLFPVNRSTDLEVLRDKFDMPSPSNPTG 365 (1124)
Q Consensus 290 ~~~~~lv~l~~~l~~Ri~~~-~~~---a~~lw~~~~~~E~wf~f~wlL~q~~kw~Pi~R~t~~~~L~~r~~~~~~~~~~~ 365 (1124)
++++.+++.+.|++||++.+ |.+ +..+.++++++|+++.++.++..+..+.|..|.+.+ .|..
T Consensus 189 l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~-------------~~~~ 255 (852)
T PRK11498 189 LIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP-------------LPKD 255 (852)
T ss_pred HHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC-------------CCcc
Confidence 45566777899999999987 444 455778899999999988898888888888775311 1222
Q ss_pred CCCCCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHHHHHHhhhhhhhhhhhhhcCCCC
Q 042084 366 RSDLPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPR 445 (1124)
Q Consensus 366 ~~~lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL~Eaa~FA~~WvPFCrk~~IepR 445 (1124)
.+.+|.|||+|+|| +||+.++.+||.+++++|||.+|+.|||.|||.++-
T Consensus 256 ~~~~P~VsViIPtY---NE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~--------------------------- 305 (852)
T PRK11498 256 MSLWPTVDIFVPTY---NEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREE--------------------------- 305 (852)
T ss_pred cCCCCcEEEEEecC---CCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChH---------------------------
Confidence 45689999999999 999999999999999999999999999999998550
Q ss_pred CCcccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhcCcccccccccccchHHHHHHHHhhhcCCCCCCCcccccc
Q 042084 446 NPDSYFSLKIDPTKNKSRTDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKMIKHMREGGADPTEPIKVQK 525 (1124)
Q Consensus 446 ~Pe~YFs~~~~~~~~~~~~~f~~er~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~~~~~~~~~~~~~~~~~~p~ 525 (1124)
.+++. +
T Consensus 306 -------------------------------t~~la--------------------~----------------------- 311 (852)
T PRK11498 306 -------------------------------FRQFA--------------------Q----------------------- 311 (852)
T ss_pred -------------------------------HHHHH--------------------H-----------------------
Confidence 00110 0
Q ss_pred cccccCCCCCCCCcccCCCCCCcCCCccceEEEecCCCCCCCCCCCCCcccccccccccCCCcEEEEEccCCCCCCCCCc
Q 042084 526 ATWMADGTHWPGTWTVPTSEHAKGDHSGILQVMLKPPSPDPLMGSADDDKLIDFTDVDIRLPLFVYMSREKRPGYEHNKK 605 (1124)
Q Consensus 526 ~~wm~dgt~wpg~w~~~~~~~~~~dH~~iiqV~l~~~~~~~~~g~~~~~~~~d~~~~~~~lP~LvYVSREKrpg~~H~~K 605 (1124)
++ .+.|+.|+++ .|+|
T Consensus 312 -----------------------------------------------------------~~-~v~yI~R~~n----~~gK 327 (852)
T PRK11498 312 -----------------------------------------------------------EV-GVKYIARPTH----EHAK 327 (852)
T ss_pred -----------------------------------------------------------HC-CcEEEEeCCC----Ccch
Confidence 01 1678888765 4589
Q ss_pred hhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHh-ccCCCcEEEEccCccccCCCcchh-------hHHHH
Q 042084 606 AGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMM-DKGGEDICYIQFPQRFEGIDPSDR-------YANNN 677 (1124)
Q Consensus 606 AGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~-Dp~g~~vafVQfPQ~F~nid~~D~-------yan~~ 677 (1124)
|||+|.+++. ++|+||+++||||++ ++++|+++|.+|. || ++|+||+||.|+|.|+..+ +.++.
T Consensus 328 AGnLN~aL~~----a~GEyIavlDAD~ip-~pdfL~~~V~~f~~dP---~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~ 399 (852)
T PRK11498 328 AGNINNALKY----AKGEFVAIFDCDHVP-TRSFLQMTMGWFLKDK---KLAMMQTPHHFFSPDPFERNLGRFRKTPNEG 399 (852)
T ss_pred HHHHHHHHHh----CCCCEEEEECCCCCC-ChHHHHHHHHHHHhCC---CeEEEEcceeccCCchHHHhhHHHhhcccch
Confidence 9999999987 589999999999999 6999999998875 54 9999999999999776432 34677
Q ss_pred HHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcc
Q 042084 678 TVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAES 757 (1124)
Q Consensus 678 ~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s 757 (1124)
..||...++|+|.+++.+++||++++||+||.+
T Consensus 400 ~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLee----------------------------------------------- 432 (852)
T PRK11498 400 TLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDE----------------------------------------------- 432 (852)
T ss_pred hHHHHHHHhHHHhhcccccccceeeeEHHHHHH-----------------------------------------------
Confidence 899999999999999999999999999999964
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCC
Q 042084 758 IPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRG 837 (1124)
Q Consensus 758 ~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rG 837 (1124)
+| ||+++++|||++++++||.+|
T Consensus 433 -----VG----------------------------------------------------Gfd~~titED~dlslRL~~~G 455 (852)
T PRK11498 433 -----IG----------------------------------------------------GIAVETVTEDAHTSLRLHRRG 455 (852)
T ss_pred -----hc----------------------------------------------------CCCCCccCccHHHHHHHHHcC
Confidence 23 677789999999999999999
Q ss_pred ceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchhhhhhHHHHHHHHHHH
Q 042084 838 WHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLFLIVYCFLP 917 (1124)
Q Consensus 838 WrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~lypl~sl~~LiylllP 917 (1124)
|+++|++. +...|++|+|++++++||.||++|++|+++. ++|++ +++|++.||++|+++++|++.+++.++|+++|
T Consensus 456 yrv~yl~~--~~a~glaPesl~~~~~QR~RWarG~lQi~r~-~~pl~-~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~P 531 (852)
T PRK11498 456 YTSAYMRI--PQAAGLATESLSAHIGQRIRWARGMVQIFRL-DNPLT-GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAP 531 (852)
T ss_pred CEEEEEec--cceeEECCCCHHHHHHHHHHHHHHHHHHHHH-hChhc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999953 4557999999999999999999999999974 67886 78999999999999999999999999999999
Q ss_pred HHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhchhhHHHhhhhHHHHHHHHHHHHHHHhccccc
Q 042084 918 ALSLISGHFIVKNLNITFLVYLLIQSLCLIGLAILEVKWSGIGLEEWWRNEQFWVIGGTSAHFAAVIQGLLKVMAGIEIS 997 (1124)
Q Consensus 918 ~l~LltGi~~ip~~s~~fliyllp~~ls~~l~~lLe~rwsGvsl~~wWr~qr~W~I~~tsa~l~Av~~aLLk~Lgg~k~s 997 (1124)
++||++|+.++.+....+++|++|+++...++ ....+|.....||+ |.+-. +.++..+. ..+...+++++.+
T Consensus 532 l~~l~~gi~~i~a~~~~i~~y~lP~~~~~~l~---~~~~~g~~r~~~ws-eiye~---v~a~~l~~-~~~~~ll~p~~~~ 603 (852)
T PRK11498 532 LAFLLLHAYIIYAPALMIALFVLPHMIHASLT---NSRIQGKYRHSFWS-EIYET---VLAWYIAP-PTTVALFNPHKGK 603 (852)
T ss_pred HHHHHhCChheeCChHHHHHHHHHHHHHHHHH---HHHhcCcchHhHHH-HHHHH---HHHHHHHH-HHHHHHcCccCCC
Confidence 99999999999887778888888887654332 22334544455664 32221 23333333 3334467889999
Q ss_pred eEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 042084 998 FTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFSFWVLAHLYPFAKG 1077 (1124)
Q Consensus 998 F~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~fWvl~nL~Pf~kg 1077 (1124)
|+||+|+...+. + .|+|. +..|+++++++|++|+++|++++..+.. ....+.+++.+|+++|++-+.-+
T Consensus 604 F~VTpKg~~~~~-----~--~~~~~-~~~P~~~L~~L~l~gl~~g~~r~~~~~~---~~~~~~~~~~~W~~~nl~~l~~a 672 (852)
T PRK11498 604 FNVTAKGGLVEE-----E--YVDWV-ISRPYIFLVLLNLVGVAVGIWRYFYGPP---NEILTVIVSLVWVFYNLIILGGA 672 (852)
T ss_pred cccCCCCccccc-----c--ceehH-HHHHHHHHHHHHHHHHHHHHHHHHhCCc---ccchhhhhhHHHHHHHHHHHHHH
Confidence 999999875432 1 24453 5679999999999999999999876432 12334568999999998887766
Q ss_pred Hh
Q 042084 1078 LM 1079 (1124)
Q Consensus 1078 L~ 1079 (1124)
+.
T Consensus 673 ~~ 674 (852)
T PRK11498 673 VA 674 (852)
T ss_pred HH
Confidence 63
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=2.1e-32 Score=332.19 Aligned_cols=220 Identities=21% Similarity=0.265 Sum_probs=172.6
Q ss_pred cEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHh-ccCCCcEEEEccCccccC
Q 042084 588 LFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMM-DKGGEDICYIQFPQRFEG 666 (1124)
Q Consensus 588 ~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~-Dp~g~~vafVQfPQ~F~n 666 (1124)
++.|..|+++ .|+||||+|.++|.++ .+++||+++|||+++ .+++|++++.+|. || ++|.||+|+.+.|
T Consensus 193 ~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m-~~d~L~~lv~~m~~dP---~vGlVQt~~~~~n 262 (691)
T PRK05454 193 RIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLM-SGDTLVRLVRLMEANP---RAGLIQTLPVAVG 262 (691)
T ss_pred cEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCC-CHHHHHHHHHHHhhCc---CEEEEeCCccCcC
Confidence 4899999886 4589999999998765 578999999999999 6999999999997 65 9999999999988
Q ss_pred CCcchhhHH----HHHHHHhhHHHHhhhcCC--cccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccc
Q 042084 667 IDPSDRYAN----NNTVFFDGNMRALDGLQG--PFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLD 740 (1124)
Q Consensus 667 id~~D~yan----~~~vFfdv~~~glDGlqG--p~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~ 740 (1124)
.+. .|+. ...++.++...|++.+|| ..|+|+|+++||+|+...
T Consensus 263 ~~s--lfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~----------------------------- 311 (691)
T PRK05454 263 ADT--LFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH----------------------------- 311 (691)
T ss_pred CCC--HHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh-----------------------------
Confidence 753 3432 234556677889887774 369999999999999741
Q ss_pred ccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccccccccccccccccccc
Q 042084 741 VNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIY 820 (1124)
Q Consensus 741 ~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~y 820 (1124)
+|.|.- .| ..||..
T Consensus 312 -----------------------~glp~L------~g-------------------------------------~~p~~~ 325 (691)
T PRK05454 312 -----------------------CGLPPL------PG-------------------------------------RGPFGG 325 (691)
T ss_pred -----------------------cCCccc------cc-------------------------------------cCCCCC
Confidence 221100 00 136777
Q ss_pred CcccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhc
Q 042084 821 GSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNV 900 (1124)
Q Consensus 821 gSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~ 900 (1124)
.++|||+++|.+|+++||+++|+ |+...+++++|+|+.++++||.||++|++|++.. +..+++++.+|++|++.
T Consensus 326 ~~LseD~~~a~~l~~~GyrV~~~-pd~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~-----l~~~gl~~~~R~~~l~g 399 (691)
T PRK05454 326 HILSHDFVEAALMRRAGWGVWLA-PDLPGSYEELPPNLLDELKRDRRWCQGNLQHLRL-----LLAKGLHPVSRLHFLTG 399 (691)
T ss_pred CcccHHHHHHHHHHHCCCEEEEc-CccccccccCCCCHHHHHHHHHHHHhchHHHHHH-----HHhcCCCHHHHHHHHHH
Confidence 89999999999999999999998 5445568999999999999999999999998752 23688999999999987
Q ss_pred hhhhhhHHHHHHH-HHHHHHH
Q 042084 901 GIYPFTSLFLIVY-CFLPALS 920 (1124)
Q Consensus 901 ~lypl~sl~~Liy-lllP~l~ 920 (1124)
++.++.+...+++ ++.|++.
T Consensus 400 ~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 400 IMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 7777765544443 3444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.98 E-value=3.2e-31 Score=288.72 Aligned_cols=182 Identities=22% Similarity=0.295 Sum_probs=147.2
Q ss_pred CcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHh-ccCCCcEEEEccCcccc
Q 042084 587 PLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMM-DKGGEDICYIQFPQRFE 665 (1124)
Q Consensus 587 P~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~-Dp~g~~vafVQfPQ~F~ 665 (1124)
++++|++|++++| +||||||.+++..+ ++++||+++|||+.+ .|++|++++.+|. || ++|.||+||+|.
T Consensus 67 ~~v~~~~r~~~~g----~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~-~p~~l~~~v~~~~~~~---~vg~vq~~~~~~ 136 (254)
T cd04191 67 GRIYYRRRRENTG----RKAGNIADFCRRWG--SRYDYMVVLDADSLM-SGDTIVRLVRRMEANP---RAGIIQTAPKLI 136 (254)
T ss_pred CcEEEEEcCCCCC----ccHHHHHHHHHHhC--CCCCEEEEEeCCCCC-CHHHHHHHHHHHHhCC---CEEEEeCCceeE
Confidence 4599999999765 89999999887532 588999999999999 6999999999997 65 999999999999
Q ss_pred CCCcc-hh-hHHHHHHHHhhHHHHhhhcCC--cccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccc
Q 042084 666 GIDPS-DR-YANNNTVFFDGNMRALDGLQG--PFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDV 741 (1124)
Q Consensus 666 nid~~-D~-yan~~~vFfdv~~~glDGlqG--p~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~ 741 (1124)
|.+.- .+ .+-++..|..+.+.|++.++| .+|+||+.++||+||....-
T Consensus 137 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~---------------------------- 188 (254)
T cd04191 137 GAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCA---------------------------- 188 (254)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcC----------------------------
Confidence 87632 11 122356677788899887765 47899999999999964110
Q ss_pred cccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccC
Q 042084 742 NLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYG 821 (1124)
Q Consensus 742 ~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~yg 821 (1124)
+.+++| -+||...
T Consensus 189 ------------------~~~i~g-------------------------------------------------~g~~~~~ 201 (254)
T cd04191 189 ------------------LPVLPG-------------------------------------------------RPPFGGH 201 (254)
T ss_pred ------------------CccccC-------------------------------------------------CCCCCCC
Confidence 011232 1267778
Q ss_pred cccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhH
Q 042084 822 SVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVE 874 (1124)
Q Consensus 822 SVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQ 874 (1124)
+++||+++|++++.+||+++|. |+....++++|++++++++||.||++|++|
T Consensus 202 ~l~eD~~l~~~~~~~G~ri~~~-~~~~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 202 ILSHDFVEAALMRRAGWEVRLA-PDLEGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred eecHHHHHHHHHHHcCCEEEEc-cCCcceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 9999999999999999999998 444445799999999999999999999998
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=2.3e-28 Score=279.60 Aligned_cols=165 Identities=28% Similarity=0.397 Sum_probs=132.2
Q ss_pred CCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHH
Q 042084 601 EHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVF 680 (1124)
Q Consensus 601 ~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vF 680 (1124)
.+++|+||+|..+.. +.+++|+++|+|+++ .|++|++++..|.|+ +.+|.+|.||.+.+.++....+..+.+.
T Consensus 121 ~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~-~~d~l~~~~~~f~~~--~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 193 (439)
T COG1215 121 KNGGKAGALNNGLKR----AKGDVVVILDADTVP-EPDALRELVSPFEDP--PVGAVVGTPRIRNRPDPSNLLGRIQAIE 193 (439)
T ss_pred cCccchHHHHHHHhh----cCCCEEEEEcCCCCC-ChhHHHHHHhhhcCC--CeeEEeCCceeeecCChhhhcchhcchh
Confidence 366899999998886 469999999999999 699999999999985 3558999999998876421222222222
Q ss_pred Hh-----hHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhh
Q 042084 681 FD-----GNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLA 755 (1124)
Q Consensus 681 fd-----v~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~ 755 (1124)
|. ....+.++..-.++.|++.++||+||.+
T Consensus 194 ~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~--------------------------------------------- 228 (439)
T COG1215 194 YLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEE--------------------------------------------- 228 (439)
T ss_pred hhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHH---------------------------------------------
Confidence 22 2222333334567899999999999964
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHh
Q 042084 756 ESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHN 835 (1124)
Q Consensus 756 ~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~ 835 (1124)
+| ||...++|||.+++++||.
T Consensus 229 -------~g----------------------------------------------------~~~~~~i~ED~~lt~~l~~ 249 (439)
T COG1215 229 -------VG----------------------------------------------------GWLEDTITEDADLTLRLHL 249 (439)
T ss_pred -------hC----------------------------------------------------CCCCCceeccHHHHHHHHH
Confidence 12 6888999999999999999
Q ss_pred CCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 042084 836 RGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 878 (1124)
Q Consensus 836 rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~s 878 (1124)
+|||+.|++ .+.+++++|+|+.++++||.||++|.+|++..
T Consensus 250 ~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 250 RGYRVVYVP--EAIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred CCCeEEEee--cceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 999999995 35678999999999999999999999999875
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.96 E-value=1.7e-26 Score=268.92 Aligned_cols=172 Identities=19% Similarity=0.244 Sum_probs=136.6
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++.++++. +||+|+|++++. +++++|+++|+|+++ +|++|++.+..|.+ +++++.||..++..|.+
T Consensus 132 v~vv~~~~n~-----Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~--~~~~g~v~g~~~~~~~~ 199 (444)
T PRK14583 132 LRVIHLAHNQ-----GKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIA--NPRTGAVTGNPRIRTRS 199 (444)
T ss_pred EEEEEeCCCC-----CHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHh--CCCeEEEEccceecCCC
Confidence 4445544432 499999999886 589999999999999 79999999988864 35899999988776542
Q ss_pred cc-hh-hHHHHHHHHhhHHHHhhhcCCccc-ccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccc
Q 042084 669 PS-DR-YANNNTVFFDGNMRALDGLQGPFY-VGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLP 745 (1124)
Q Consensus 669 ~~-D~-yan~~~vFfdv~~~glDGlqGp~y-vGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 745 (1124)
.- .+ ...+...++....++.+..+..+. .|++++|||+||..
T Consensus 200 ~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~----------------------------------- 244 (444)
T PRK14583 200 TLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALAD----------------------------------- 244 (444)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHH-----------------------------------
Confidence 11 11 123445566667777776666654 68999999999863
Q ss_pred cccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccc
Q 042084 746 KRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTE 825 (1124)
Q Consensus 746 ~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTE 825 (1124)
+| ||..+.++|
T Consensus 245 -----------------vG----------------------------------------------------g~~~~~i~E 255 (444)
T PRK14583 245 -----------------VG----------------------------------------------------YWSPDMITE 255 (444)
T ss_pred -----------------cC----------------------------------------------------CCCCCcccc
Confidence 22 688888999
Q ss_pred hHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 042084 826 DVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 878 (1124)
Q Consensus 826 Di~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~s 878 (1124)
|++++++|+.+||++.|+ | ....++++|+|++++++||.||++|.+|++++
T Consensus 256 D~dl~~rl~~~G~~i~~~-p-~a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 256 DIDISWKLQLKHWSVFFE-P-RGLCWILMPETLRGLWKQRLRWAQGGAEVFLK 306 (444)
T ss_pred cHHHHHHHHHcCCeEEEe-e-ccEEeeeCCCCHHHHHHHHHHHhCcHHHHHHH
Confidence 999999999999999998 4 35668999999999999999999999999985
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.95 E-value=7.7e-25 Score=251.72 Aligned_cols=172 Identities=20% Similarity=0.267 Sum_probs=132.6
Q ss_pred cEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCC
Q 042084 588 LFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGI 667 (1124)
Q Consensus 588 ~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~ni 667 (1124)
++.++.++++. .||+|+|.+++. ++++||+++|+|.++ +|++|.+.+..|.. +++++.||...+..|.
T Consensus 110 ~v~~i~~~~n~-----Gka~aln~g~~~----a~~d~i~~lDaD~~~-~~d~L~~l~~~~~~--~~~v~~v~g~~~~~~~ 177 (420)
T PRK11204 110 RLRVIHLAENQ-----GKANALNTGAAA----ARSEYLVCIDGDALL-DPDAAAYMVEHFLH--NPRVGAVTGNPRIRNR 177 (420)
T ss_pred cEEEEEcCCCC-----CHHHHHHHHHHH----cCCCEEEEECCCCCC-ChhHHHHHHHHHHh--CCCeEEEECCceeccc
Confidence 36677666543 499999999986 589999999999999 79999999999863 2599999998877654
Q ss_pred CcchhhHH----HHHHHHhhHHHHhhhcCCccc-ccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccc
Q 042084 668 DPSDRYAN----NNTVFFDGNMRALDGLQGPFY-VGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVN 742 (1124)
Q Consensus 668 d~~D~yan----~~~vFfdv~~~glDGlqGp~y-vGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 742 (1124)
.. ..+. +....+....++....+...+ .|+++++||+++..
T Consensus 178 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~-------------------------------- 223 (420)
T PRK11204 178 ST--LLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHE-------------------------------- 223 (420)
T ss_pred hh--HHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHH--------------------------------
Confidence 32 2222 222333334444443433333 68889999999853
Q ss_pred ccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCc
Q 042084 743 LLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGS 822 (1124)
Q Consensus 743 ~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygS 822 (1124)
+| ||....
T Consensus 224 --------------------vg----------------------------------------------------g~~~~~ 231 (420)
T PRK11204 224 --------------------VG----------------------------------------------------YWSTDM 231 (420)
T ss_pred --------------------hC----------------------------------------------------CCCCCc
Confidence 22 677778
Q ss_pred ccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhh
Q 042084 823 VTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSR 879 (1124)
Q Consensus 823 VTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk 879 (1124)
++||++++++++.+||++.|+ |+ +.++++.|+|++++++||.||++|++|.++..
T Consensus 232 ~~ED~~l~~rl~~~G~~i~~~-p~-~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 232 ITEDIDISWKLQLRGWDIRYE-PR-ALCWILMPETLKGLWKQRLRWAQGGAEVLLKN 286 (420)
T ss_pred ccchHHHHHHHHHcCCeEEec-cc-cEEEeECcccHHHHHHHHHHHhcCHHHHHHHH
Confidence 999999999999999999998 54 55689999999999999999999999998853
No 18
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=99.94 E-value=2.1e-28 Score=217.78 Aligned_cols=61 Identities=33% Similarity=0.826 Sum_probs=35.0
Q ss_pred CCCcCCCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-CCCCCCCCCCcC
Q 042084 122 HPQMAGAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT-GLCPGCKEPYKL 184 (1124)
Q Consensus 122 ~~~~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r 184 (1124)
+++++.++||+||| |||+||++++|++|||| ||+|||||+|||||+||| |+|||||++|||
T Consensus 1 pkp~k~~~~qiCqi--CGD~VGl~~~Ge~FVAC~eC~fPvCr~CyEYErkeg~q~CpqCkt~ykr 63 (80)
T PF14569_consen 1 PKPLKNLNGQICQI--CGDDVGLTENGEVFVACHECAFPVCRPCYEYERKEGNQVCPQCKTRYKR 63 (80)
T ss_dssp SS--S--SS-B-SS--S--B--B-SSSSB--S-SSS-----HHHHHHHHHTS-SB-TTT--B---
T ss_pred CcChhhcCCccccc--ccCccccCCCCCEEEEEcccCCccchhHHHHHhhcCcccccccCCCccc
Confidence 47899999999999 99999999999999999 999999999999999999 999999999998
No 19
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.94 E-value=1.9e-24 Score=251.82 Aligned_cols=210 Identities=17% Similarity=0.190 Sum_probs=144.4
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCC--Ccc----hhhHHHH
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGI--DPS----DRYANNN 677 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~ni--d~~----D~yan~~ 677 (1124)
+||+|+|++++. ++++||+++|+|+++ +|++|++++..|.+ +++++.|+..+.-... ... .++..+.
T Consensus 118 Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~--~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 190 (439)
T TIGR03111 118 GKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFEN--NPDIHAMTGVILTDKELIEKTKGRFLKLIRRC 190 (439)
T ss_pred CHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHh--CCCeEEEEeEEecCchhhhhhcchhhhHhHHh
Confidence 699999999986 579999999999999 79999999999973 2477766654422110 000 0111111
Q ss_pred HHHHhhH-----HHHhhh-cCCcc-cccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCC
Q 042084 678 TVFFDGN-----MRALDG-LQGPF-YVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGN 750 (1124)
Q Consensus 678 ~vFfdv~-----~~glDG-lqGp~-yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~ 750 (1124)
. +++.. .+.... .+.++ ..|++++|||++|..
T Consensus 191 ~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~---------------------------------------- 229 (439)
T TIGR03111 191 E-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILK---------------------------------------- 229 (439)
T ss_pred H-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHH----------------------------------------
Confidence 1 12111 122222 22232 367888899999853
Q ss_pred cchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHH
Q 042084 751 STMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTG 830 (1124)
Q Consensus 751 s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~Tg 830 (1124)
.| ||+..+++||++++
T Consensus 230 ------------vg----------------------------------------------------gf~~~~i~ED~~l~ 245 (439)
T TIGR03111 230 ------------TQ----------------------------------------------------LYNSETVGEDTDMT 245 (439)
T ss_pred ------------hC----------------------------------------------------CCCCCCcCccHHHH
Confidence 12 77778899999999
Q ss_pred HHHHh-CCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchhhhhhHHH
Q 042084 831 YRMHN-RGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGIYPFTSLF 909 (1124)
Q Consensus 831 lrLh~-rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~lypl~sl~ 909 (1124)
++++. .|++..|+ | .+.++.++|+|++++++||.||++|.+|++....++.. +.+.++.+++.+..........++
T Consensus 246 ~rl~~~~g~kv~~~-~-~a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 322 (439)
T TIGR03111 246 FQIRELLDGKVYLC-E-NAIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESAN-KSIKGFFSNFMVRRIMYDHTFAFP 322 (439)
T ss_pred HHHHHhcCCeEEEC-C-CCEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhh-hchhhhhhHHHHHHHHhhHhhHHH
Confidence 99985 68899988 4 35678899999999999999999999999875433333 344666666555444444455678
Q ss_pred HHHHHHHHHHHHHhCCccc
Q 042084 910 LIVYCFLPALSLISGHFIV 928 (1124)
Q Consensus 910 ~LiylllP~l~LltGi~~i 928 (1124)
.+++.++++++.++|..+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 323 RMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHHHHHHhccHHH
Confidence 7888888888877775443
No 20
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=8.6e-24 Score=249.79 Aligned_cols=194 Identities=22% Similarity=0.229 Sum_probs=137.4
Q ss_pred CCchhHHHHHHHhccc--cCCC---CEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchh----h
Q 042084 603 NKKAGAMNALVRASAI--LSNG---PFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDR----Y 673 (1124)
Q Consensus 603 ~~KAGALNallRvSav--lsng---pfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~----y 673 (1124)
+.||+|||.+++.... ...| ++|+++|||.++ +|++|+....++. +.++||.|+...+.+.+.. |
T Consensus 135 ~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~-----~~~~VQ~pv~~~~~~~~~~~ag~y 208 (504)
T PRK14716 135 TSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLP-----RHDFVQLPVFSLPRDWGEWVAGTY 208 (504)
T ss_pred CCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcC-----CCCEEecceeccCCchhHHHHHHH
Confidence 4899999998865310 1134 999999999999 7999997544332 4468999988765443322 3
Q ss_pred HHHHHHHHhhHHHHhhhcCCcc-cccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcc
Q 042084 674 ANNNTVFFDGNMRALDGLQGPF-YVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNST 752 (1124)
Q Consensus 674 an~~~vFfdv~~~glDGlqGp~-yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~ 752 (1124)
..+....+...+..++.+++++ ..|+|++|||++|..+.
T Consensus 209 ~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~---------------------------------------- 248 (504)
T PRK14716 209 MDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLA---------------------------------------- 248 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHH----------------------------------------
Confidence 3333333444567788898886 68999999999996410
Q ss_pred hhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHH
Q 042084 753 MLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYR 832 (1124)
Q Consensus 753 ~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~Tglr 832 (1124)
.+-|| ++|+.+++|||+++|++
T Consensus 249 --------~~~GG--------------------------------------------------~~fd~~sLTED~dLglR 270 (504)
T PRK14716 249 --------AERGG--------------------------------------------------QPFDSDSLTEDYDIGLR 270 (504)
T ss_pred --------hhcCC--------------------------------------------------CCCCCCCcchHHHHHHH
Confidence 01111 13888999999999999
Q ss_pred HHhCCceEEEeccCC--------------ccccccCCCCHHHHHHHhhhhhcch-hHHHhhhcc--ccccccccchhcch
Q 042084 833 MHNRGWHSVYCVTKR--------------DAFRGSAPINLTDRLHQVLRWATGS-VEIFFSRNN--AFLASRKLKLLQRL 895 (1124)
Q Consensus 833 Lh~rGWrSvY~~P~r--------------~af~G~aP~tL~a~l~QR~RWA~G~-lQIl~sk~~--pLl~~~~L~l~QRL 895 (1124)
|+.+|||++|++ .. .+.++++|+|++++++||.||+.|. +|....... .+ ..+.+.|++|.
T Consensus 271 L~~~G~rv~y~p-~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~-~~~~~~~rdr~ 348 (504)
T PRK14716 271 LKRAGFRQIFVR-VRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPA-ATKYMLWRDRK 348 (504)
T ss_pred HHHCCCEEEEec-ccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCch-hhhhhHHHHHH
Confidence 999999999984 33 1356889999999999999999995 787652111 11 13457778887
Q ss_pred hhhhchh
Q 042084 896 AYLNVGI 902 (1124)
Q Consensus 896 ~Yl~~~l 902 (1124)
..+...+
T Consensus 349 ~~~~~~~ 355 (504)
T PRK14716 349 GLLTNLL 355 (504)
T ss_pred HHHHHHH
Confidence 7766544
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.91 E-value=3e-22 Score=245.22 Aligned_cols=171 Identities=20% Similarity=0.289 Sum_probs=126.3
Q ss_pred CCchhHHHHHHHhcccc---CC--CCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchh----h
Q 042084 603 NKKAGAMNALVRASAIL---SN--GPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDR----Y 673 (1124)
Q Consensus 603 ~~KAGALNallRvSavl---sn--gpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~----y 673 (1124)
+.||+|||.++....-. +. .++++++|||.++ +|++|+ .+.+|.++ + ++||.|....+.+.+.. |
T Consensus 132 ~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~---~-~~VQ~p~~p~~~~~~~~~~~~~ 205 (727)
T PRK11234 132 TSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVER---K-DLIQIPVYPFEREWTHFTSGTY 205 (727)
T ss_pred CCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCC---C-CeEeecccCCCccHHHHHHHHH
Confidence 47999999988764111 12 3568889999999 799998 67888874 4 89999977444333332 3
Q ss_pred HHHHHHHHhhHHHHhhhcCCcc-cccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcc
Q 042084 674 ANNNTVFFDGNMRALDGLQGPF-YVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNST 752 (1124)
Q Consensus 674 an~~~vFfdv~~~glDGlqGp~-yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~ 752 (1124)
..+....+...+++++.++|++ +.|+|++|+|++|.-
T Consensus 206 ~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~a------------------------------------------ 243 (727)
T PRK11234 206 IDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTA------------------------------------------ 243 (727)
T ss_pred HHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHH------------------------------------------
Confidence 3444445557789999998886 589999995554321
Q ss_pred hhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHH
Q 042084 753 MLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYR 832 (1124)
Q Consensus 753 ~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~Tglr 832 (1124)
+.+.|| ..+|..+++|||+++|++
T Consensus 244 -------l~~~gg-------------------------------------------------g~~~~~~~lTED~dlg~r 267 (727)
T PRK11234 244 -------LLEDGD-------------------------------------------------GIAFDVQSLTEDYDIGFR 267 (727)
T ss_pred -------HHHhcC-------------------------------------------------CCCcCCCcchHHHHHHHH
Confidence 112332 126899999999999999
Q ss_pred HHhCCceEEEecc-----C----------------CccccccCCCCHHHHHHHhhhhhcc-hhHHHh
Q 042084 833 MHNRGWHSVYCVT-----K----------------RDAFRGSAPINLTDRLHQVLRWATG-SVEIFF 877 (1124)
Q Consensus 833 Lh~rGWrSvY~~P-----~----------------r~af~G~aP~tL~a~l~QR~RWA~G-~lQIl~ 877 (1124)
|+.+||+++|++. + ..+++++.|+|++++++||.||.+| .+|.+.
T Consensus 268 L~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 268 LKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred HHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 9999999999851 0 1346788899999999999999999 688764
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.90 E-value=2.6e-22 Score=209.16 Aligned_cols=171 Identities=33% Similarity=0.557 Sum_probs=138.5
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.|+.++++.| +|+||+|.+++. .+++||+.+|+|.++ +|++|.+.+..|.+ +++++.||+++.+.+.+
T Consensus 60 ~~~~~~~~~~~----~~~~~~n~~~~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~ 128 (234)
T cd06421 60 YRYLTRPDNRH----AKAGNLNNALAH----TTGDFVAILDADHVP-TPDFLRRTLGYFLD--DPKVALVQTPQFFYNPD 128 (234)
T ss_pred ceEEEeCCCCC----CcHHHHHHHHHh----CCCCEEEEEccccCc-CccHHHHHHHHHhc--CCCeEEEecceEEecCC
Confidence 45555655444 799999999986 489999999999999 79999999999986 35899999999998776
Q ss_pred cc----hhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccccc
Q 042084 669 PS----DRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLL 744 (1124)
Q Consensus 669 ~~----D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 744 (1124)
.. ..+......|+.....+........+.|.++++||+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~---------------------------------- 174 (234)
T cd06421 129 PFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDE---------------------------------- 174 (234)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHH----------------------------------
Confidence 54 2344455666666666766666778899999999999853
Q ss_pred ccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCccc
Q 042084 745 PKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVT 824 (1124)
Q Consensus 745 ~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVT 824 (1124)
+| ||....+.
T Consensus 175 ------------------ig----------------------------------------------------~~~~~~~~ 184 (234)
T cd06421 175 ------------------IG----------------------------------------------------GFPTDSVT 184 (234)
T ss_pred ------------------hC----------------------------------------------------CCCcccee
Confidence 22 34445578
Q ss_pred chHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHH
Q 042084 825 EDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIF 876 (1124)
Q Consensus 825 EDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl 876 (1124)
||++++++++.+||+++|++ + +..++..|.++..+++|+.||.+|++|++
T Consensus 185 eD~~l~~r~~~~g~~i~~~~-~-~~~~~~~~~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 185 EDLATSLRLHAKGWRSVYVP-E-PLAAGLAPETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred ccHHHHHHHHHcCceEEEec-C-ccccccCCccHHHHHHHHHHHhcCCeeeC
Confidence 99999999999999999984 3 45679999999999999999999999863
No 23
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.89 E-value=7.7e-22 Score=207.95 Aligned_cols=166 Identities=22% Similarity=0.340 Sum_probs=128.4
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
++++.+.++.| +|++|+|++++. ++++||+++|+|.++ +|++|++...++.|+ ++++||....+.+.+
T Consensus 63 i~~~~~~~~~G----~k~~a~n~g~~~----a~~~~i~~~DaD~~~-~~~~l~~~~~~~~~~---~v~~v~~~~~~~~~~ 130 (232)
T cd06437 63 IKHVRRADRTG----YKAGALAEGMKV----AKGEYVAIFDADFVP-PPDFLQKTPPYFADP---KLGFVQTRWGHINAN 130 (232)
T ss_pred eEEEECCCCCC----CchHHHHHHHHh----CCCCEEEEEcCCCCC-ChHHHHHhhhhhcCC---CeEEEecceeeEcCC
Confidence 77777777766 699999999986 489999999999999 699999977776664 899999987766554
Q ss_pred cch--hh-HHHHHHHHhhHHHHhhhcCCcc-cccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccccc
Q 042084 669 PSD--RY-ANNNTVFFDGNMRALDGLQGPF-YVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLL 744 (1124)
Q Consensus 669 ~~D--~y-an~~~vFfdv~~~glDGlqGp~-yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 744 (1124)
.+- ++ .-....++...+.+....+..+ ..|++++|||+++..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~---------------------------------- 176 (232)
T cd06437 131 YSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIED---------------------------------- 176 (232)
T ss_pred CchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHH----------------------------------
Confidence 321 11 1122234555555555444433 579999999999853
Q ss_pred ccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCccc
Q 042084 745 PKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVT 824 (1124)
Q Consensus 745 ~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVT 824 (1124)
+| ||....+.
T Consensus 177 ------------------vg----------------------------------------------------g~~~~~~~ 186 (232)
T cd06437 177 ------------------AG----------------------------------------------------GWNHDTLT 186 (232)
T ss_pred ------------------hC----------------------------------------------------CCCCCcch
Confidence 22 56556678
Q ss_pred chHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcch
Q 042084 825 EDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGS 872 (1124)
Q Consensus 825 EDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~ 872 (1124)
||++++++|+.+||+.+|+ |+ +.++...|+|+.++++||+||++|.
T Consensus 187 ED~~l~~rl~~~G~~~~~~-~~-~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 187 EDLDLSYRAQLKGWKFVYL-DD-VVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred hhHHHHHHHHHCCCeEEEe-cc-ceeeeeCCcCHHHHHHHHHHhccCC
Confidence 9999999999999999998 53 5668999999999999999999983
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.87 E-value=5.5e-21 Score=203.51 Aligned_cols=162 Identities=20% Similarity=0.311 Sum_probs=129.1
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcc---hhhHHHHHHH
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPS---DRYANNNTVF 680 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~---D~yan~~~vF 680 (1124)
+|++|+|++++. ++|+||+.+|+|.++ .|++|.+++.+|.+ .++++++||.+..+.+...+ ..+......+
T Consensus 71 G~~~a~n~g~~~----a~gd~i~~~DaD~~~-~~~~l~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (241)
T cd06427 71 TKPKACNYALAF----ARGEYVVIYDAEDAP-DPDQLKKAVAAFAR-LDDKLACVQAPLNYYNARENWLTRMFALEYAAW 144 (241)
T ss_pred chHHHHHHHHHh----cCCCEEEEEcCCCCC-ChHHHHHHHHHHHh-cCCCEEEEeCceEeeCCCccHHHHHHHHHHHHH
Confidence 699999999986 589999999999999 69999999999974 23699999999888765432 1122233344
Q ss_pred HhhHHHHhhhcCCcc-cccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchh
Q 042084 681 FDGNMRALDGLQGPF-YVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIP 759 (1124)
Q Consensus 681 fdv~~~glDGlqGp~-yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~ 759 (1124)
|....++....+.+. +.|+++++||+++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~------------------------------------------------- 175 (241)
T cd06427 145 FDYLLPGLARLGLPIPLGGTSNHFRTDVLRE------------------------------------------------- 175 (241)
T ss_pred HHHHHHHHHhcCCeeecCCchHHhhHHHHHH-------------------------------------------------
Confidence 566667776666665 468889999999864
Q ss_pred hhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCce
Q 042084 760 IAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWH 839 (1124)
Q Consensus 760 ~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWr 839 (1124)
+| ||.....+||++.+++++.+||+
T Consensus 176 ---vg----------------------------------------------------g~~~~~~~eD~~l~~rl~~~G~r 200 (241)
T cd06427 176 ---LG----------------------------------------------------GWDPFNVTEDADLGLRLARAGYR 200 (241)
T ss_pred ---cC----------------------------------------------------CCCcccchhhHHHHHHHHHCCce
Confidence 22 45555678999999999999999
Q ss_pred EEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 042084 840 SVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 878 (1124)
Q Consensus 840 SvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~s 878 (1124)
.+|+ +. ..+...|+|++++++||.||+.|.+|++..
T Consensus 201 ~~~~-~~--~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 201 TGVL-NS--TTLEEANNALGNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred EEEe-cc--cccccCcHhHHHHHHHHHHHhccHHHHHHH
Confidence 9998 42 346899999999999999999999999874
No 25
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.86 E-value=1.9e-20 Score=196.92 Aligned_cols=173 Identities=28% Similarity=0.416 Sum_probs=128.7
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++..++++| +|+||+|.+++.+. .+++||+.+|+|..+ .|++|.+.+.+|.+ ++++.||+++.+.+..
T Consensus 58 i~~i~~~~~~G----~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~---~~~~~v~~~~~~~~~~ 127 (236)
T cd06435 58 FRFFHVEPLPG----AKAGALNYALERTA--PDAEIIAVIDADYQV-EPDWLKRLVPIFDD---PRVGFVQAPQDYRDGE 127 (236)
T ss_pred EEEEEcCCCCC----CchHHHHHHHHhcC--CCCCEEEEEcCCCCc-CHHHHHHHHHHhcC---CCeeEEecCccccCCC
Confidence 55565665555 69999999998742 468999999999999 79999999999865 4899999987665432
Q ss_pred cchhhH----HHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccccc
Q 042084 669 PSDRYA----NNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLL 744 (1124)
Q Consensus 669 ~~D~ya----n~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 744 (1124)
.. .+. -....+|..........+..+..|+++++||+++..
T Consensus 128 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~---------------------------------- 172 (236)
T cd06435 128 ES-LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDD---------------------------------- 172 (236)
T ss_pred cc-HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHHH----------------------------------
Confidence 21 221 111122222222333334455688889999999853
Q ss_pred ccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCccc
Q 042084 745 PKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVT 824 (1124)
Q Consensus 745 ~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVT 824 (1124)
+| ||......
T Consensus 173 ------------------iG----------------------------------------------------gf~~~~~~ 182 (236)
T cd06435 173 ------------------VG----------------------------------------------------GWDEWCIT 182 (236)
T ss_pred ------------------hC----------------------------------------------------CCCCcccc
Confidence 22 45555678
Q ss_pred chHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 042084 825 EDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 878 (1124)
Q Consensus 825 EDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~s 878 (1124)
||++++++++.+||+..|+ |+ ...+...|.++.++++||.||++|++|++..
T Consensus 183 eD~dl~~r~~~~G~~~~~~-~~-~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 183 EDSELGLRMHEAGYIGVYV-AQ-SYGHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred chHHHHHHHHHCCcEEEEc-ch-hhccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 9999999999999999998 44 4457899999999999999999999999873
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.83 E-value=1.7e-21 Score=203.40 Aligned_cols=165 Identities=25% Similarity=0.372 Sum_probs=104.3
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++.+.+++| ...|++|+|.+++. ..+++|+++|+|.++ +|++|++++.+|.++ +++.||.+..+++ +
T Consensus 60 v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~---~~~~v~~~~~~~~-~ 128 (228)
T PF13641_consen 60 VRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADP---GVGAVGGPVFPDN-D 128 (228)
T ss_dssp EEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS---S--EEEEEEEETT-C
T ss_pred eEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhC---CCCeEeeeEeecC-C
Confidence 56666655443 23699999999986 369999999999999 799999999999664 9999998886665 2
Q ss_pred cchhhHHHHHHHHh----hHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccccc
Q 042084 669 PSDRYANNNTVFFD----GNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLL 744 (1124)
Q Consensus 669 ~~D~yan~~~vFfd----v~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 744 (1124)
.+ .+......++. ....+....+...+.|++++|||+++..
T Consensus 129 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~---------------------------------- 173 (228)
T PF13641_consen 129 RN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEE---------------------------------- 173 (228)
T ss_dssp CC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHH----------------------------------
T ss_pred CC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHH----------------------------------
Confidence 22 11111122221 1223334455566789999999999863
Q ss_pred ccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCccc
Q 042084 745 PKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVT 824 (1124)
Q Consensus 745 ~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVT 824 (1124)
+| ||......
T Consensus 174 ------------------~g----------------------------------------------------~fd~~~~~ 183 (228)
T PF13641_consen 174 ------------------VG----------------------------------------------------GFDPFILG 183 (228)
T ss_dssp ------------------H-----------------------------------------------------S--SSSSS
T ss_pred ------------------hC----------------------------------------------------CCCCCCcc
Confidence 22 56556778
Q ss_pred chHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcc
Q 042084 825 EDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATG 871 (1124)
Q Consensus 825 EDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G 871 (1124)
||++++++++.+||+++|+ | ...++...|.+++++++||.||+.|
T Consensus 184 eD~~l~~r~~~~G~~~~~~-~-~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 184 EDFDLCLRLRAAGWRIVYA-P-DALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp HHHHHHHHHHHTT--EEEE-E-EEEEEE--SSSTHHHHHHHHHHH--
T ss_pred cHHHHHHHHHHCCCcEEEE-C-CcEEEEeCCCCHHHHHHHHhccCcC
Confidence 9999999999999999998 4 3557899999999999999999987
No 27
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.81 E-value=1.5e-17 Score=202.59 Aligned_cols=169 Identities=19% Similarity=0.279 Sum_probs=127.3
Q ss_pred CchhHHHHHHHhc---cccCCCCE--EEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCcc-ccCCCcc---hhhH
Q 042084 604 KKAGAMNALVRAS---AILSNGPF--ILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQR-FEGIDPS---DRYA 674 (1124)
Q Consensus 604 ~KAGALNallRvS---avlsngpf--IlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~-F~nid~~---D~ya 674 (1124)
.||.|||.++... ...+.+.| |+++|||.++ +|++|+. |-+++++ + .+||.|-. ..|...+ -.|+
T Consensus 141 gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~-~P~~L~~-~~~~~~~--~--~~iQ~pV~~~~~~~~~~l~~~~~ 214 (703)
T PRK15489 141 CKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVL-HPLELKY-FNYLLPR--K--DLVQLPVLSLERKWYEWVAGTYM 214 (703)
T ss_pred CHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCC-ChhHHHH-HHhhcCC--c--ceeeeeeccCCCccccHHHHHHH
Confidence 7999999877642 11234455 9999999999 7999975 5777753 2 36998732 1111111 3477
Q ss_pred HHHHHHHhhHHHHhhhcCCccc-ccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcch
Q 042084 675 NNNTVFFDGNMRALDGLQGPFY-VGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTM 753 (1124)
Q Consensus 675 n~~~vFfdv~~~glDGlqGp~y-vGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~ 753 (1124)
.+....|...+.++..++|++. .|||++|||+||..
T Consensus 215 ~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~------------------------------------------- 251 (703)
T PRK15489 215 DEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA------------------------------------------- 251 (703)
T ss_pred HHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH-------------------------------------------
Confidence 7888888999999999999986 77999999999964
Q ss_pred hhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHH
Q 042084 754 LAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRM 833 (1124)
Q Consensus 754 f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrL 833 (1124)
+.+.|| | .+|..+|+|||++.|+||
T Consensus 252 ------l~~~gg----------------------------------------------~---~~~n~~sLTED~Dlg~RL 276 (703)
T PRK15489 252 ------LMKERG----------------------------------------------N---QPFNTSSLTEDYDFSFRL 276 (703)
T ss_pred ------HHHhcC----------------------------------------------C---CCCCCCCchHhHHHHHHH
Confidence 111221 0 168889999999999999
Q ss_pred HhCCceEEEecc---------------------CCccccccCCCCHHHHHHHhhhhhcchh-HHH
Q 042084 834 HNRGWHSVYCVT---------------------KRDAFRGSAPINLTDRLHQVLRWATGSV-EIF 876 (1124)
Q Consensus 834 h~rGWrSvY~~P---------------------~r~af~G~aP~tL~a~l~QR~RWA~G~l-QIl 876 (1124)
+.+|||+.|+.- ...+.+...|.|+.+.++||.||-.|-. |-.
T Consensus 277 ~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 277 AELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred HHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 999999999321 1356778899999999999999999977 654
No 28
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.78 E-value=2.2e-17 Score=188.79 Aligned_cols=166 Identities=17% Similarity=0.209 Sum_probs=116.3
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++...++.| .+.|++|+|.+++. +++++|+.+|+|..+ .|++|++.+..|.|| +++.|+.+.+.. +
T Consensus 100 i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~-~p~~L~~lv~~~~~~---~v~~V~~~~~~~--~ 167 (373)
T TIGR03472 100 IDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISV-GPDYLRQVVAPLADP---DVGLVTCLYRGR--P 167 (373)
T ss_pred eEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCc-ChhHHHHHHHHhcCC---CcceEeccccCC--C
Confidence 55554444334 56799999988875 589999999999999 799999999999775 899999864432 2
Q ss_pred cchhhH---HH--HHHHHhhHHHHhhhcCC-cccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccc
Q 042084 669 PSDRYA---NN--NTVFFDGNMRALDGLQG-PFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVN 742 (1124)
Q Consensus 669 ~~D~ya---n~--~~vFfdv~~~glDGlqG-p~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 742 (1124)
....+. .. +..|+...+.. +..+. .+..|++.++||+++..
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~~-------------------------------- 214 (373)
T TIGR03472 168 VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLEA-------------------------------- 214 (373)
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHHH--------------------------------
Confidence 222111 11 11122211111 12233 24578889999999964
Q ss_pred ccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccc--c
Q 042084 743 LLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWI--Y 820 (1124)
Q Consensus 743 ~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~--y 820 (1124)
+| ||. .
T Consensus 215 --------------------iG----------------------------------------------------Gf~~~~ 222 (373)
T TIGR03472 215 --------------------IG----------------------------------------------------GLAALA 222 (373)
T ss_pred --------------------cC----------------------------------------------------ChHHhc
Confidence 23 333 2
Q ss_pred CcccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchh
Q 042084 821 GSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSV 873 (1124)
Q Consensus 821 gSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~l 873 (1124)
.+++||++++.+++.+||++.|+ |. .......|+|++++++||.||++...
T Consensus 223 ~~~~ED~~l~~~i~~~G~~v~~~-~~-~v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 223 HHLADDYWLGELVRALGLRVVLA-PV-VVDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred ccchHHHHHHHHHHHcCCeEEec-ch-hhhcCCCccCHHHHHHHHHHHHhhhh
Confidence 46789999999999999999997 43 45567888999999999999985543
No 29
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.77 E-value=2.1e-18 Score=185.55 Aligned_cols=164 Identities=16% Similarity=0.049 Sum_probs=108.7
Q ss_pred CCCCEEEeecCCCccCchHHHHHHHHHHh-ccCCCcEEEEccCccccCCCcchhhHHHHHHHH---hhHH-HHhhhcCCc
Q 042084 620 SNGPFILNLDCDHYIYNCKAIREGMCFMM-DKGGEDICYIQFPQRFEGIDPSDRYANNNTVFF---DGNM-RALDGLQGP 694 (1124)
Q Consensus 620 sngpfIlnlDcD~y~nnp~~Lr~amcff~-Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFf---dv~~-~glDGlqGp 694 (1124)
++++||+++|+|.++ +|++|++++..|. || +++.||..+...|...+-.-.-+ .+-| .... .+...++..
T Consensus 72 a~~e~i~~~DaD~~~-~~~~l~~l~~~~~~~p---~vg~v~g~~~~~~~~~~~~~~~q-~~ey~~~~~~~~~~~s~~g~~ 146 (244)
T cd04190 72 DDPEFILLVDADTKF-DPDSIVQLYKAMDKDP---EIGGVCGEIHPMGKKQGPLVMYQ-VFEYAISHWLDKAFESVFGFV 146 (244)
T ss_pred CCCCEEEEECCCCcC-CHhHHHHHHHHHHhCC---CEEEEEeeeEEcCCcchhHHHhH-heehhhhhhhcccHHHcCCce
Confidence 589999999999999 7999999999885 54 89999999887765323111111 1111 1112 223333333
Q ss_pred -ccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhhhhhcCCCCCCCCC
Q 042084 695 -FYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPS 773 (1124)
Q Consensus 695 -~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~ 773 (1124)
...|++.+|||++|.+.... .. + +.+
T Consensus 147 ~~~~G~~~~~R~~~l~~~~~~------------------------~~-------~-----------~~~----------- 173 (244)
T cd04190 147 TCLPGCFSMYRIEALKGDNGG------------------------KG-------P-----------LLD----------- 173 (244)
T ss_pred EECCCceEEEEehhhcCCccc------------------------cc-------c-----------chh-----------
Confidence 35789999999999762100 00 0 000
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEEE--eccCCcccc
Q 042084 774 VSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVY--CVTKRDAFR 851 (1124)
Q Consensus 774 ~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY--~~P~r~af~ 851 (1124)
+.|..+|-. ...+....+++||++++++|..+||++.| + | .+.++
T Consensus 174 ------------------------------~~~~~~~~~-~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~-~-~a~~~ 220 (244)
T cd04190 174 ------------------------------YAYLTNTVD-SLHKKNNLDLGEDRILCTLLLKAGPKRKYLYV-P-GAVAE 220 (244)
T ss_pred ------------------------------hccccCccc-chHHHHHHhHhcccceeHHHhccCCccEEEEe-c-ccEEE
Confidence 000000000 00122346799999999999999999999 6 4 35668
Q ss_pred ccCCCCHHHHHHHhhhhhcchhH
Q 042084 852 GSAPINLTDRLHQVLRWATGSVE 874 (1124)
Q Consensus 852 G~aP~tL~a~l~QR~RWA~G~lQ 874 (1124)
.++|+|+.++++||.||++|++.
T Consensus 221 ~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 221 TDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred EECCCCHHHHHHHhHhhhccccc
Confidence 99999999999999999999863
No 30
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.75 E-value=3.9e-15 Score=171.33 Aligned_cols=220 Identities=21% Similarity=0.286 Sum_probs=169.0
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.|-.|.+|-+ .||||+....|--| +...++++||||.+. ..+.+-+.+..|.. +++.|.+|+--.--|.+
T Consensus 214 ifYRrRr~n~~----RKaGNIaDfcrRwG--~~Y~~MlVLDADSvM-tgd~lvrLv~~ME~--~P~aGlIQt~P~~~gg~ 284 (736)
T COG2943 214 IFYRRRRRNVK----RKAGNIADFCRRWG--SAYSYMLVLDADSVM-TGDCLVRLVRLMEA--NPDAGLIQTSPKASGGD 284 (736)
T ss_pred eeeehHhhhhc----ccccCHHHHHHHhC--cccceEEEeeccccc-CchHHHHHHHHHhh--CCCCceeecchhhcCcc
Confidence 77877777655 79999999998766 678999999999999 58988888877763 46999999976655543
Q ss_pred cchhhHHH----HHHHHhhHHHHhhhcCCc--ccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccc
Q 042084 669 PSDRYANN----NTVFFDGNMRALDGLQGP--FYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVN 742 (1124)
Q Consensus 669 ~~D~yan~----~~vFfdv~~~glDGlqGp--~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 742 (1124)
..|+-- .+|+=-+...|+..+|+. .|-|.|+++|-+|+.+-.
T Consensus 285 --TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hc------------------------------ 332 (736)
T COG2943 285 --TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHC------------------------------ 332 (736)
T ss_pred --hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhc------------------------------
Confidence 345432 345666788999999986 699999999999985310
Q ss_pred ccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCc
Q 042084 743 LLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGS 822 (1124)
Q Consensus 743 ~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygS 822 (1124)
.+..+.| ++ -|-...
T Consensus 333 ----------------gLp~LpG------------~~-------------------------------------pFgG~i 347 (736)
T COG2943 333 ----------------GLPPLPG------------RG-------------------------------------PFGGHI 347 (736)
T ss_pred ----------------CCCCCCC------------CC-------------------------------------CCCccc
Confidence 0111111 11 122356
Q ss_pred ccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhhhccccccccccchhcchhhhhchh
Q 042084 823 VTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLKLLQRLAYLNVGI 902 (1124)
Q Consensus 823 VTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L~l~QRL~Yl~~~l 902 (1124)
++.|+..+-.|.+.||- +.+.++..-++.|.|.|+.|.++.-+|||+|++| |.+++..++|.+..|++++..++
T Consensus 348 lSHDfvEAALmRRaGW~-v~ia~dL~GSyEE~PpnLlD~l~RDRRWC~GNLq-----h~rl~~~~GlHwvsR~h~~tGVm 421 (736)
T COG2943 348 LSHDFVEAALMRRAGWG-VWIAYDLDGSYEELPPNLLDELKRDRRWCHGNLQ-----HFRLFLVKGLHWVSRAHFLTGVM 421 (736)
T ss_pred cchHHHHHHHHhhcCce-EEEeccCCCchhhCCchHHHHHhhhhHhhhcchh-----hceeeccCCccHHHHHHHHHHHH
Confidence 88999999999999994 4455777889999999999999999999999999 44677789999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 042084 903 YPFTSLFLIVYCFLPALS 920 (1124)
Q Consensus 903 ypl~sl~~LiylllP~l~ 920 (1124)
.|+++...++++++-.+.
T Consensus 422 sYlsaPlWfl~ll~g~al 439 (736)
T COG2943 422 SYLSAPLWFLFLLLGTAL 439 (736)
T ss_pred HHHhhHHHHHHHHHHHHH
Confidence 888776555555444333
No 31
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.73 E-value=1.6e-16 Score=164.52 Aligned_cols=157 Identities=17% Similarity=0.235 Sum_probs=114.7
Q ss_pred CCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcc-hhhHHHHHHHH
Q 042084 603 NKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPS-DRYANNNTVFF 681 (1124)
Q Consensus 603 ~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~-D~yan~~~vFf 681 (1124)
.+|+.|+|.++.. ++++||+++|+|.++ .|++|.+.+..|.++ ..+.|+.++.+...+.. ..+..-...+.
T Consensus 68 ~g~~~a~n~g~~~----~~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 139 (229)
T cd04192 68 SGKKNALTTAIKA----AKGDWIVTTDADCVV-PSNWLLTFVAFIQKE---QIGLVAGPVIYFKGKSLLAKFQRLDWLSL 139 (229)
T ss_pred chhHHHHHHHHHH----hcCCEEEEECCCccc-CHHHHHHHHHHhhcC---CCcEEeeeeeecCCccHHHHHHHHHHHHH
Confidence 4799999998876 479999999999999 699999999988764 67788888887622211 11121111222
Q ss_pred hhHHHHhhhcCCcc-cccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhh
Q 042084 682 DGNMRALDGLQGPF-YVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPI 760 (1124)
Q Consensus 682 dv~~~glDGlqGp~-yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~ 760 (1124)
.....+..+.+.+. ..|++.++||+++..
T Consensus 140 ~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~-------------------------------------------------- 169 (229)
T cd04192 140 LGLIAGSFGLGKPFMCNGANMAYRKEAFFE-------------------------------------------------- 169 (229)
T ss_pred HHHHhhHHHhcCccccccceEEEEHHHHHH--------------------------------------------------
Confidence 22333344455553 478888999999853
Q ss_pred hhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccc--cCcccchHHHHHHHHhCCc
Q 042084 761 AEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWI--YGSVTEDVVTGYRMHNRGW 838 (1124)
Q Consensus 761 ~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~--ygSVTEDi~TglrLh~rGW 838 (1124)
+| ||. ....+||.+..++++.+||
T Consensus 170 --~g----------------------------------------------------gf~~~~~~~~eD~~~~~~~~~~g~ 195 (229)
T cd04192 170 --VG----------------------------------------------------GFEGNDHIASGDDELLLAKVASKY 195 (229)
T ss_pred --hc----------------------------------------------------CCccccccccCCHHHHHHHHHhCC
Confidence 23 343 2467899999999999999
Q ss_pred -eEEEeccCCccccccCCCCHHHHHHHhhhhhcc
Q 042084 839 -HSVYCVTKRDAFRGSAPINLTDRLHQVLRWATG 871 (1124)
Q Consensus 839 -rSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G 871 (1124)
++.|+.......+...|.+++++++||+||++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 196 PKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred CCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 998874334556789999999999999999987
No 32
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.70 E-value=3.8e-16 Score=161.51 Aligned_cols=134 Identities=16% Similarity=0.196 Sum_probs=106.6
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.|+..+++.| ...|++|||++++. .+++||+.+|+|..+ .|++|.+.+..|.++ +++.|+..
T Consensus 60 ~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~---~~~~v~~~------- 122 (196)
T cd02520 60 ARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISV-PPDYLRRMVAPLMDP---GVGLVTCL------- 122 (196)
T ss_pred EEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceE-ChhHHHHHHHHhhCC---CCCeEEee-------
Confidence 33444443333 34689999999986 579999999999999 799999999998775 67778764
Q ss_pred cchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCcccccccccccc
Q 042084 669 PSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRF 748 (1124)
Q Consensus 669 ~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~f 748 (1124)
+..|+++++||+++..
T Consensus 123 --------------------------~~~g~~~~~r~~~~~~-------------------------------------- 138 (196)
T cd02520 123 --------------------------CAFGKSMALRREVLDA-------------------------------------- 138 (196)
T ss_pred --------------------------cccCceeeeEHHHHHh--------------------------------------
Confidence 5678999999999864
Q ss_pred CCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccc--cCcccch
Q 042084 749 GNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWI--YGSVTED 826 (1124)
Q Consensus 749 g~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~--ygSVTED 826 (1124)
+| ||. ...+.||
T Consensus 139 --------------~g----------------------------------------------------gf~~~~~~~~eD 152 (196)
T cd02520 139 --------------IG----------------------------------------------------GFEAFADYLAED 152 (196)
T ss_pred --------------cc----------------------------------------------------ChHHHhHHHHHH
Confidence 22 232 1346899
Q ss_pred HHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcc
Q 042084 827 VVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATG 871 (1124)
Q Consensus 827 i~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G 871 (1124)
++.++++..+||++.|+ |+ ...+...|.+++++++||.||++.
T Consensus 153 ~~l~~rl~~~G~~i~~~-~~-~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 153 YFLGKLIWRLGYRVVLS-PY-VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred HHHHHHHHHcCCeEEEc-ch-heeccCCcccHHHHHHHHHHHhcc
Confidence 99999999999999998 44 556789999999999999999863
No 33
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.69 E-value=8.6e-16 Score=161.06 Aligned_cols=166 Identities=18% Similarity=0.143 Sum_probs=114.1
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHh-
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFD- 682 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfd- 682 (1124)
.|++|+|.+++. +.+++|+++|+|.++ .|++|++++..|.++ +++.|+..+.+.+.+.+ .+......++.
T Consensus 64 g~~~a~n~g~~~----a~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~---~v~~v~~~~~~~~~~~~-~~~~~~~~~~~~ 134 (235)
T cd06434 64 GKRRALAEGIRH----VTTDIVVLLDSDTVW-PPNALPEMLKPFEDP---KVGGVGTNQRILRPRDS-KWSFLAAEYLER 134 (235)
T ss_pred ChHHHHHHHHHH----hCCCEEEEECCCcee-ChhHHHHHHHhccCC---CEeEEcCceEeecCccc-HHHHHHHHHHHH
Confidence 599999998886 489999999999999 699999999998864 89999999988776422 11111111111
Q ss_pred ---hHHHHhhhcCCc-ccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcch
Q 042084 683 ---GNMRALDGLQGP-FYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESI 758 (1124)
Q Consensus 683 ---v~~~glDGlqGp-~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~ 758 (1124)
.........++. ...|...++||++|..... ++ .|..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~----------------------~~---------------~~~~-- 175 (235)
T cd06434 135 RNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLF----------------------LE---------------EFTN-- 175 (235)
T ss_pred HHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhh----------------------HH---------------Hhhh--
Confidence 111222222322 2356677899999964110 00 0000
Q ss_pred hhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCc
Q 042084 759 PIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW 838 (1124)
Q Consensus 759 ~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGW 838 (1124)
+. ++.......||.+++.+++.+||
T Consensus 176 ---~~----------------------------------------------------~~~~~~~~~eD~~l~~~~~~~g~ 200 (235)
T cd06434 176 ---ET----------------------------------------------------FMGRRLNAGDDRFLTRYVLSHGY 200 (235)
T ss_pred ---hh----------------------------------------------------hcCCCCCcCchHHHHHHHHHCCC
Confidence 00 01112357899999999999999
Q ss_pred eEEEeccCCccccccCCCCHHHHHHHhhhhhcchhH
Q 042084 839 HSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVE 874 (1124)
Q Consensus 839 rSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQ 874 (1124)
+.+|+. . ...+...|.++.++++||.||++|..+
T Consensus 201 ~~~~~~-~-~~~~~~~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 201 KTVYQY-T-SEAYTETPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred eEEEec-C-CeEEEEcchhHHHHHHHhhhhhhcccC
Confidence 999984 3 344677999999999999999999753
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.67 E-value=3.4e-15 Score=158.60 Aligned_cols=153 Identities=14% Similarity=0.177 Sum_probs=106.3
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhh
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDG 683 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv 683 (1124)
.|++|+|.+++. .++++|+.+|+|.++ .|++|++.+..|.++ +++.|+......+.+. ...+......+.-
T Consensus 96 g~~~a~n~gi~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~---~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~ 166 (251)
T cd06439 96 GKAAALNRALAL----ATGEIVVFTDANALL-DPDALRLLVRHFADP---SVGAVSGELVIVDGGG-SGSGEGLYWKYEN 166 (251)
T ss_pred ChHHHHHHHHHH----cCCCEEEEEccccCc-CHHHHHHHHHHhcCC---CccEEEeEEEecCCcc-cchhHHHHHHHHH
Confidence 499999999986 468999999999999 599999999998754 7888888766654332 1111111111111
Q ss_pred HHHHhhhcCCccccccc--ceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhhh
Q 042084 684 NMRALDGLQGPFYVGTG--TMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIA 761 (1124)
Q Consensus 684 ~~~glDGlqGp~yvGTG--cvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~~ 761 (1124)
.........+-.+.++| .++||+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------------------------------------------- 195 (251)
T cd06439 167 WLKRAESRLGSTVGANGAIYAIRRELFRP--------------------------------------------------- 195 (251)
T ss_pred HHHHHHHhcCCeeeecchHHHhHHHHhcC---------------------------------------------------
Confidence 11111222222233333 3477877643
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEE
Q 042084 762 EFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSV 841 (1124)
Q Consensus 762 e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSv 841 (1124)
|......||+++++++..+||+++
T Consensus 196 --------------------------------------------------------~~~~~~~eD~~l~~~~~~~G~~~~ 219 (251)
T cd06439 196 --------------------------------------------------------LPADTINDDFVLPLRIARQGYRVV 219 (251)
T ss_pred --------------------------------------------------------CCcccchhHHHHHHHHHHcCCeEE
Confidence 112335699999999999999999
Q ss_pred EeccCCccccccCCCCHHHHHHHhhhhhcchhH
Q 042084 842 YCVTKRDAFRGSAPINLTDRLHQVLRWATGSVE 874 (1124)
Q Consensus 842 Y~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQ 874 (1124)
|+ |. +..+...|.+..++++|+.||+.|++|
T Consensus 220 ~~-~~-~~~~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 220 YE-PD-AVAYEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred ec-cc-cEEEEeCcccHHHHHHHHHHHHhcccc
Confidence 98 43 456899999999999999999999988
No 35
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.66 E-value=1.3e-15 Score=156.51 Aligned_cols=137 Identities=25% Similarity=0.371 Sum_probs=110.8
Q ss_pred EEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhhH----HHHhhhcCCc-cccc
Q 042084 624 FILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDGN----MRALDGLQGP-FYVG 698 (1124)
Q Consensus 624 fIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv~----~~glDGlqGp-~yvG 698 (1124)
+|+++|+|..+ .+++|++++.+|.|| +++.||+|+.+++ .++...+.+..+|+.. ....+..+.+ ...|
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~~~~---~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 74 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAALEDP---KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSG 74 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHHhCC---CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCccccC
Confidence 58999999999 699999999998875 8999999999873 3455566666666322 2233445544 4689
Q ss_pred ccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCC
Q 042084 699 TGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGR 778 (1124)
Q Consensus 699 TGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~ 778 (1124)
+|.++||+|+.. +|
T Consensus 75 ~~~~~r~~~l~~----------------------------------------------------vg-------------- 88 (193)
T PF13632_consen 75 SGMLFRREALRE----------------------------------------------------VG-------------- 88 (193)
T ss_pred cceeeeHHHHHH----------------------------------------------------hC--------------
Confidence 999999999964 22
Q ss_pred CCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccc-cCcccchHHHHHHHHhCCceEEEeccCCccccccCCCC
Q 042084 779 PPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWI-YGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPIN 857 (1124)
Q Consensus 779 ~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~-ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~t 857 (1124)
||. ..+++||+++++++..+||++.|+ |+ ..++.++|.|
T Consensus 89 --------------------------------------~~~~~~~~~ED~~l~~~l~~~G~~~~~~-~~-~~~~~~~p~t 128 (193)
T PF13632_consen 89 --------------------------------------GFDDPFSIGEDMDLGFRLRRAGYRIVYV-PD-AIVYTEAPPT 128 (193)
T ss_pred --------------------------------------cccccccccchHHHHHHHHHCCCEEEEe-cc-cceeeeCCCC
Confidence 666 788999999999999999999999 43 3568999999
Q ss_pred HHHHHHHhhhhhcch
Q 042084 858 LTDRLHQVLRWATGS 872 (1124)
Q Consensus 858 L~a~l~QR~RWA~G~ 872 (1124)
+.++++||+||+.|.
T Consensus 129 ~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 129 FRAFIRQRRRWARGA 143 (193)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999999998
No 36
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.54 E-value=3.7e-12 Score=146.71 Aligned_cols=159 Identities=14% Similarity=0.076 Sum_probs=100.2
Q ss_pred CCCchhHHHHHHHhccccC-CCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhh-HHHHHH
Q 042084 602 HNKKAGAMNALVRASAILS-NGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRY-ANNNTV 679 (1124)
Q Consensus 602 H~~KAGALNallRvSavls-ngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~y-an~~~v 679 (1124)
-..|+.|+|.+++.+.... .+++|+.+|+|..+ +|+.|++++..+.++ +++.|....++.....-+.. ......
T Consensus 113 ~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~-~p~~l~~lv~~~~~~---~~~~vs~~~~~~~~~~~~~~~~~~~~~ 188 (384)
T TIGR03469 113 WSGKLWAVSQGIAAARTLAPPADYLLLTDADIAH-GPDNLARLVARARAE---GLDLVSLMVRLRCESFWEKLLIPAFVF 188 (384)
T ss_pred CcchHHHHHHHHHHHhccCCCCCEEEEECCCCCC-ChhHHHHHHHHHHhC---CCCEEEecccccCCCHHHHHHHHHHHH
Confidence 3479999999998753211 18999999999999 699999999999874 34455443333221100110 000111
Q ss_pred HHhhHH---HHhhhcC-CcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhh
Q 042084 680 FFDGNM---RALDGLQ-GPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLA 755 (1124)
Q Consensus 680 Ffdv~~---~glDGlq-Gp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~ 755 (1124)
++.... ...+... .....|.+.++||+++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~--------------------------------------------- 223 (384)
T TIGR03469 189 FFQKLYPFRWVNDPRRRTAAAAGGCILIRREALER--------------------------------------------- 223 (384)
T ss_pred HHHHhcchhhhcCCCccceeecceEEEEEHHHHHH---------------------------------------------
Confidence 111100 0111111 112468888999999864
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccc--cCcccchHHHHHHH
Q 042084 756 ESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWI--YGSVTEDVVTGYRM 833 (1124)
Q Consensus 756 ~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~--ygSVTEDi~TglrL 833 (1124)
+| ||. ...+.||++++.++
T Consensus 224 -------vG----------------------------------------------------Gf~~~~~~~~ED~~L~~r~ 244 (384)
T TIGR03469 224 -------IG----------------------------------------------------GIAAIRGALIDDCTLAAAV 244 (384)
T ss_pred -------cC----------------------------------------------------CHHHHhhCcccHHHHHHHH
Confidence 23 332 24678999999999
Q ss_pred HhCCceEEEeccCCccccccCCCCHHHHHHHhhhhh
Q 042084 834 HNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWA 869 (1124)
Q Consensus 834 h~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA 869 (1124)
..+|+++.+... ........-.++.+.++|+.||+
T Consensus 245 ~~~G~~v~~~~~-~~~~s~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 245 KRSGGRIWLGLA-ARTRSLRPYDGLGEIWRMIARTA 279 (384)
T ss_pred HHcCCcEEEEec-CceEEEEecCCHHHHHHHHHHhH
Confidence 999999999754 23323345569999999999994
No 37
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.53 E-value=3.7e-13 Score=141.33 Aligned_cols=54 Identities=15% Similarity=0.146 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHhCCceEEEeccCCccccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 042084 823 VTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 878 (1124)
Q Consensus 823 VTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~tL~a~l~QR~RWA~G~lQIl~s 878 (1124)
..||.+.+++++.+|+++.|+ |+ ....-..+.+++.+++|+.||+.|..|++..
T Consensus 180 ~~eD~~l~~r~~~~G~~~~~~-~~-~~~~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 180 RNEDAELNYRLRKAGYKIWLS-PD-IRVYYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred ccchhHHHHHHHHcCcEEEEc-CC-eEEEEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 469999999999999999998 43 3445678899999999999999999998874
No 38
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.36 E-value=1.6e-11 Score=127.26 Aligned_cols=103 Identities=17% Similarity=0.053 Sum_probs=79.2
Q ss_pred CchhHHHHHHHhccc-------cCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcch---hh
Q 042084 604 KKAGAMNALVRASAI-------LSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSD---RY 673 (1124)
Q Consensus 604 ~KAGALNallRvSav-------lsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D---~y 673 (1124)
.|++|||++++.+.- -..+++|+++|+|..+ +|++|+++..+|.+| +++.||.+.++.|.+.+- .+
T Consensus 65 Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~-~~~~l~~~~~~~~~~---~v~~v~~~~~~~~~~~~~~~~~~ 140 (191)
T cd06436 65 GKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRL-DPNALEAVAPYFSDP---RVAGTQSRVRMYNRHKNLLTILQ 140 (191)
T ss_pred CHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCc-CHhHHHHHHHhhcCC---ceEEEeeeEEEecCCCCHHHHHH
Confidence 699999998876410 0124899999999999 799999988888775 899999999998866442 12
Q ss_pred HHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcC
Q 042084 674 ANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 674 an~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
..+...++.+++.++...+...+.|+|++|||++|..
T Consensus 141 ~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~ 177 (191)
T cd06436 141 DLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDG 177 (191)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHH
Confidence 3344555567788877666555799999999999964
No 39
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.29 E-value=4e-11 Score=122.70 Aligned_cols=101 Identities=20% Similarity=0.075 Sum_probs=72.7
Q ss_pred CchhHHHHHHHhcc-ccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcch---hhHHHHHH
Q 042084 604 KKAGAMNALVRASA-ILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSD---RYANNNTV 679 (1124)
Q Consensus 604 ~KAGALNallRvSa-vlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D---~yan~~~v 679 (1124)
.|++|+|.+++... .-.++++|+++|+|+.+ .|++|++.+..|.+. . ..||......+.+.+- .+.-....
T Consensus 63 gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~-~p~~l~~l~~~~~~~--~--~~v~g~~~~~~~~~~~~~~~~~~~~~~ 137 (183)
T cd06438 63 GKGYALDFGFRHLLNLADDPDAVVVFDADNLV-DPNALEELNARFAAG--A--RVVQAYYNSKNPDDSWITRLYAFAFLV 137 (183)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCC-ChhHHHHHHHHHhhC--C--CeeEEEEeeeCCccCHHHHHHHHHHHH
Confidence 69999999887641 12479999999999999 699999999988752 2 4578776665543321 12223444
Q ss_pred HHhhHHHHhhhcCCcc-cccccceeehhhhc
Q 042084 680 FFDGNMRALDGLQGPF-YVGTGTMFRRFALY 709 (1124)
Q Consensus 680 Ffdv~~~glDGlqGp~-yvGTGcvfRR~ALy 709 (1124)
++.+...++..+++.. +.|+|++|||++|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 138 FNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred HHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 4455666777777764 58999999999985
No 40
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=99.28 E-value=1.6e-12 Score=108.08 Aligned_cols=46 Identities=57% Similarity=1.326 Sum_probs=29.6
Q ss_pred ccCCCcccccCCCCcccccccCCccchhhhhhhhhcC-CCCCCCCCCCc
Q 042084 136 PACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDT-GLCPGCKEPYK 183 (1124)
Q Consensus 136 ~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~ 183 (1124)
++|++++ |++|..|.||+|+|+|||+||.+.++++ +.||+||++|+
T Consensus 2 p~C~e~~--d~~d~~~~PC~Cgf~IC~~C~~~i~~~~~g~CPgCr~~Y~ 48 (48)
T PF14570_consen 2 PLCDEEL--DETDKDFYPCECGFQICRFCYHDILENEGGRCPGCREPYK 48 (48)
T ss_dssp TTTS-B----CCCTT--SSTTS----HHHHHHHTTSS-SB-TTT--B--
T ss_pred CCccccc--ccCCCccccCcCCCcHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 4599997 9999999999999999999999999866 99999999996
No 41
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.22 E-value=1.4e-10 Score=120.65 Aligned_cols=154 Identities=22% Similarity=0.269 Sum_probs=113.6
Q ss_pred CCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHH
Q 042084 602 HNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFF 681 (1124)
Q Consensus 602 H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFf 681 (1124)
-|.|..||-.+++. . ..+++|+++|+|+.+ +|++|++.+..|.|| +++.|..+.++.+.+ ...+.-...|+
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~p---~vglVt~~~~~~~~~--~~~~~l~~~~~ 85 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRV-PPDYLRELVAPLADP---GVGLVTGLPRGVPAR--GFWSRLEAAFF 85 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeE-CHHHHHHHHHHHhCC---CCcEEEecccccCCc--CHHHHHHHHHH
Confidence 57899999999986 2 589999999999999 699999999999996 899998876655443 22222222222
Q ss_pred hhHHHHhh-hcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhh
Q 042084 682 DGNMRALD-GLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPI 760 (1124)
Q Consensus 682 dv~~~glD-GlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~ 760 (1124)
.....-+. .-+.++..|..+++||++|..
T Consensus 86 ~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~-------------------------------------------------- 115 (175)
T PF13506_consen 86 NFLPGVLQALGGAPFAWGGSMAFRREALEE-------------------------------------------------- 115 (175)
T ss_pred hHHHHHHHHhcCCCceecceeeeEHHHHHH--------------------------------------------------
Confidence 21111111 224567899999999999964
Q ss_pred hhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccc--cCcccchHHHHHHHHhCCc
Q 042084 761 AEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWI--YGSVTEDVVTGYRMHNRGW 838 (1124)
Q Consensus 761 ~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~--ygSVTEDi~TglrLh~rGW 838 (1124)
+|| +. ...+.||+.+|-+++.+||
T Consensus 116 --~GG----------------------------------------------------~~~l~~~ladD~~l~~~~~~~G~ 141 (175)
T PF13506_consen 116 --IGG----------------------------------------------------FEALADYLADDYALGRRLRARGY 141 (175)
T ss_pred --ccc----------------------------------------------------HHHHhhhhhHHHHHHHHHHHCCC
Confidence 232 21 2578999999999999999
Q ss_pred eEEEeccCCccccccCC----CCHHHHHHHhhhhhc
Q 042084 839 HSVYCVTKRDAFRGSAP----INLTDRLHQVLRWAT 870 (1124)
Q Consensus 839 rSvY~~P~r~af~G~aP----~tL~a~l~QR~RWA~ 870 (1124)
|+++.. .++.....| .++.++++++.||++
T Consensus 142 ~v~~~~--~~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 142 RVVLSP--YPVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred eEEEcc--hheeecccCccccccHHHHHHHHHhhcC
Confidence 999974 234445666 489999999999985
No 42
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.09 E-value=1.9e-09 Score=110.52 Aligned_cols=93 Identities=22% Similarity=0.202 Sum_probs=59.4
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHH-hccCCCcEEEEccCccccCCCcchhhHHHHHHHHh
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFM-MDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFD 682 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff-~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfd 682 (1124)
.++.|+|.+++. +.++||+.+|+|.++ .|++|.+++..| .++ +++.|+........+.. .+.. .+.
T Consensus 70 g~~~a~n~g~~~----a~~d~i~~ld~D~~~-~~~~l~~~~~~~~~~~---~~~~v~~~~~~~~~~~~-~~~~----~~~ 136 (202)
T cd04184 70 GISAATNSALEL----ATGEFVALLDHDDEL-APHALYEVVKALNEHP---DADLIYSDEDKIDEGGK-RSEP----FFK 136 (202)
T ss_pred CHHHHHHHHHHh----hcCCEEEEECCCCcC-ChHHHHHHHHHHHhCC---CCCEEEccHHhccCCCC-Eecc----ccC
Confidence 589999998886 478999999999999 699999999988 443 66677665544321111 0000 000
Q ss_pred hHHHHhhhcCCcccccccceeehhhhcC
Q 042084 683 GNMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 683 v~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
.... .+......+.|.++++||+++..
T Consensus 137 ~~~~-~~~~~~~~~~~~~~~~~r~~~~~ 163 (202)
T cd04184 137 PDWS-PDLLLSQNYIGHLLVYRRSLVRQ 163 (202)
T ss_pred CCCC-HHHhhhcCCccceEeEEHHHHHH
Confidence 0000 11222334567778899998853
No 43
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.07 E-value=4e-09 Score=108.28 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=53.8
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++.++++.| +++|+|.+++. +.|+||+.+|+|.++ .|++|.+++.+|.. .++++.|.......+.+
T Consensus 57 i~~i~~~~n~G-----~~~a~N~g~~~----a~gd~i~~lD~Dd~~-~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~ 124 (201)
T cd04195 57 LKVVPLEKNRG-----LGKALNEGLKH----CTYDWVARMDTDDIS-LPDRFEKQLDFIEK--NPEIDIVGGGVLEFDSD 124 (201)
T ss_pred eEEEEcCcccc-----HHHHHHHHHHh----cCCCEEEEeCCcccc-CcHHHHHHHHHHHh--CCCeEEEcccEEEECCC
Confidence 56666666544 89999999986 479999999999999 69999999999874 34788888776554433
No 44
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.84 E-value=7.3e-08 Score=97.34 Aligned_cols=95 Identities=15% Similarity=-0.006 Sum_probs=60.5
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhh
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDG 683 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv 683 (1124)
.+++|+|.+++. .+++||+.+|+|..+ .++.+.+.+..+... +++..|.....+.+.+........ ..
T Consensus 62 g~~~a~n~~~~~----a~~~~v~~ld~D~~~-~~~~~~~~~~~~~~~--~~~~~v~g~~~~~~~~~~~~~~~~-----~~ 129 (202)
T cd06433 62 GIYDAMNKGIAL----ATGDIIGFLNSDDTL-LPGALLAVVAAFAEH--PEVDVVYGDVLLVDENGRVIGRRR-----PP 129 (202)
T ss_pred CHHHHHHHHHHH----cCCCEEEEeCCCccc-CchHHHHHHHHHHhC--CCccEEEeeeEEEcCCCCcccCCC-----Cc
Confidence 489999999886 479999999999999 589999998555431 356666665554433322111000 01
Q ss_pred HHHHhhhcCCcccccccceeehhhhcC
Q 042084 684 NMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 684 ~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
......-.......|+++++||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
T cd06433 130 PFLDKFLLYGMPICHQATFFRRSLFEK 156 (202)
T ss_pred chhhhHHhhcCcccCcceEEEHHHHHH
Confidence 111122233455677888999998864
No 45
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.84 E-value=9.9e-08 Score=93.61 Aligned_cols=66 Identities=18% Similarity=0.158 Sum_probs=55.0
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhh
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDG 683 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv 683 (1124)
.+++|+|.+++.+ ++++|+.+|+|.++ .++++.+.+-.+.+ .++++.|+..
T Consensus 61 g~~~a~n~~~~~~----~~~~i~~~D~D~~~-~~~~l~~~~~~~~~--~~~~~~~~~~---------------------- 111 (166)
T cd04186 61 GFGAGNNQGIREA----KGDYVLLLNPDTVV-EPGALLELLDAAEQ--DPDVGIVGPK---------------------- 111 (166)
T ss_pred ChHHHhhHHHhhC----CCCEEEEECCCcEE-CccHHHHHHHHHHh--CCCceEEEcc----------------------
Confidence 5899999999864 89999999999999 69999999887665 3577777654
Q ss_pred HHHHhhhcCCcccccccceeehhhhcC
Q 042084 684 NMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 684 ~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
+.|.+.++||+++..
T Consensus 112 ------------~~~~~~~~~~~~~~~ 126 (166)
T cd04186 112 ------------VSGAFLLVRREVFEE 126 (166)
T ss_pred ------------CceeeEeeeHHHHHH
Confidence 888999999998864
No 46
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.78 E-value=2.3e-06 Score=102.76 Aligned_cols=171 Identities=17% Similarity=0.140 Sum_probs=101.2
Q ss_pred CCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhH-HHHHHHH-hhHHHHhhhcCCccc--
Q 042084 621 NGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYA-NNNTVFF-DGNMRALDGLQGPFY-- 696 (1124)
Q Consensus 621 ngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~ya-n~~~vFf-dv~~~glDGlqGp~y-- 696 (1124)
..+|||.+|||..+ .|+++.+.+--|.+ +++++-|..--+-.|...+=... +..+.+. ....|+...+-|.+-
T Consensus 201 ~~~~il~~DaDt~~-~p~~~~~lv~~m~~--d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~VtCL 277 (527)
T PF03142_consen 201 FYEYILMVDADTKF-DPDSVNRLVDAMER--DPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVTCL 277 (527)
T ss_pred ceEEEEEecCCceE-cHHHHHHHHHHHcC--CCCeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCceeec
Confidence 45899999999999 79999998888763 34776666643444433221100 1111111 345566666666653
Q ss_pred ccccceeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCC
Q 042084 697 VGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSY 776 (1124)
Q Consensus 697 vGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~ 776 (1124)
-|.-+++|-+|+.+-+ ..+.+ .|++.--+.++...
T Consensus 278 PGcfsmyR~~a~~~~~------------------------~~~~p-----------~l~~~~i~~~Y~~~---------- 312 (527)
T PF03142_consen 278 PGCFSMYRISALMDGD------------------------GYWVP-----------LLISPDIIEKYSEN---------- 312 (527)
T ss_pred CCcceeeeeehhcccc------------------------ccccc-----------cccchHHHHHHhhc----------
Confidence 6777789999987511 00000 00000000001000
Q ss_pred CCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhC--CceEEEeccCCccccccC
Q 042084 777 GRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNR--GWHSVYCVTKRDAFRGSA 854 (1124)
Q Consensus 777 ~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~r--GWrSvY~~P~r~af~G~a 854 (1124)
+. ++.|- -.-..+.||=.++-.|..+ |||..|+ |+ +..+..+
T Consensus 313 ------------~~------dtlh~----------------~nl~~lGEDR~LttLlLk~~~~~k~~y~-~~-A~a~T~a 356 (527)
T PF03142_consen 313 ------------PV------DTLHQ----------------KNLLDLGEDRWLTTLLLKQFPGYKTEYV-PS-AVAYTDA 356 (527)
T ss_pred ------------cc------hHHHH----------------HhhhhcchhHHHHHHHHhhCCCceEEEc-cc-ccccccC
Confidence 00 00000 0012578998887666665 8999999 43 4557999
Q ss_pred CCCHHHHHHHhhhhhcchhHH
Q 042084 855 PINLTDRLHQVLRWATGSVEI 875 (1124)
Q Consensus 855 P~tL~a~l~QR~RWA~G~lQI 875 (1124)
|++++.+++||+||..|++--
T Consensus 357 P~t~~vflsQRRRWinSTi~N 377 (527)
T PF03142_consen 357 PETFSVFLSQRRRWINSTIHN 377 (527)
T ss_pred CccHHHHHHHhhhccchhHhh
Confidence 999999999999999999843
No 47
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.77 E-value=1.6e-07 Score=96.66 Aligned_cols=109 Identities=11% Similarity=0.062 Sum_probs=68.2
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
++++..+++. .+++|+|.+++. ++++||+++|+|.+. .|+.|.+.+..+.. .+..+++.....+.+.+
T Consensus 56 ~~~~~~~~~~-----G~~~~~n~g~~~----~~g~~v~~ld~Dd~~-~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~ 123 (214)
T cd04196 56 IILIRNGKNL-----GVARNFESLLQA----ADGDYVFFCDQDDIW-LPDKLERLLKAFLK--DDKPLLVYSDLELVDEN 123 (214)
T ss_pred EEEEeCCCCc-----cHHHHHHHHHHh----CCCCEEEEECCCccc-ChhHHHHHHHHHhc--CCCceEEecCcEEECCC
Confidence 4455555544 489999998875 589999999999999 69999999998654 24667777776554332
Q ss_pred cchhhHHHHHHHHhh--HHHHhhhcCCcccccccceeehhhhcC
Q 042084 669 PSDRYANNNTVFFDG--NMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 669 ~~D~yan~~~vFfdv--~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
..- ........... ......-.......|+++++||+++..
T Consensus 124 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 166 (214)
T cd04196 124 GNP-IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL 166 (214)
T ss_pred CCC-cccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHh
Confidence 211 00000000000 001112223445678999999999864
No 48
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.73 E-value=4.4e-07 Score=94.41 Aligned_cols=41 Identities=22% Similarity=0.147 Sum_probs=34.2
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhc
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMD 649 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~D 649 (1124)
.|++|+|.+++. .++++|+++|.|.++ .|+++.+.+..+.+
T Consensus 59 g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l~~~~~~ 99 (221)
T cd02522 59 GRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAIIETLRA 99 (221)
T ss_pred CHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHHHHHhhc
Confidence 489999988875 469999999999999 69999997655554
No 49
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=98.73 E-value=4e-07 Score=100.98 Aligned_cols=53 Identities=21% Similarity=0.186 Sum_probs=43.7
Q ss_pred CcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhc
Q 042084 587 PLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMD 649 (1124)
Q Consensus 587 P~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~D 649 (1124)
|.+.++..+++- .++.|.|.+++. +.|+||+.||+|..+ +|+.|.+.+-.+..
T Consensus 58 ~~v~vi~~~~n~-----G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~ 110 (299)
T cd02510 58 PKVKVLRLKKRE-----GLIRARIAGARA----ATGDVLVFLDSHCEV-NVGWLEPLLARIAE 110 (299)
T ss_pred CcEEEEEcCCCC-----CHHHHHHHHHHH----ccCCEEEEEeCCccc-CccHHHHHHHHHHh
Confidence 346666655543 489999999986 589999999999999 69999999998875
No 50
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.69 E-value=7.2e-07 Score=90.03 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=54.4
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHhh
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFDG 683 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfdv 683 (1124)
.|++|+|.+++. ++++||+.+|+|..+ .|++|.+.+.++ ++ .++ |..++...+.+...
T Consensus 66 ~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~~~~~~-~~---~~~-v~g~~~~~~~~~~~------------ 123 (182)
T cd06420 66 RKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDFIADHIELA-EP---GVF-LSGSRVLLNEKLTE------------ 123 (182)
T ss_pred hHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHHHHHHHHHh-CC---CcE-Eecceeecccccce------------
Confidence 589999999986 589999999999999 699999999887 42 333 44444433322111
Q ss_pred HHHHhhhcCCcccccccceeehhhhcC
Q 042084 684 NMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 684 ~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
..+.|+++.++|+++..
T Consensus 124 ----------~~~~~~~~~~~r~~~~~ 140 (182)
T cd06420 124 ----------RGIRGCNMSFWKKDLLA 140 (182)
T ss_pred ----------eEeccceEEEEHHHHHH
Confidence 34567788888888753
No 51
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=98.68 E-value=1.4e-06 Score=93.70 Aligned_cols=108 Identities=14% Similarity=0.028 Sum_probs=64.4
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++.++++.| |++|+|++++. +.++||+.+|+|... +|++|.+++..+.++ +...|... ++....
T Consensus 70 v~~~~~~~n~G-----~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~---~~~~v~g~-r~~~~~ 135 (243)
T PLN02726 70 ILLRPRPGKLG-----LGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRET---GADIVTGT-RYVKGG 135 (243)
T ss_pred EEEEecCCCCC-----HHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhc---CCcEEEEc-cccCCC
Confidence 55555555444 89999999986 479999999999998 799999999888763 34445443 332211
Q ss_pred cc---hhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcC
Q 042084 669 PS---DRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 669 ~~---D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
.. ..+-.....++.....-+-+.+..-..|...+|||+++..
T Consensus 136 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~ 180 (243)
T PLN02726 136 GVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALED 180 (243)
T ss_pred CcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHH
Confidence 10 1111111112222222222333333455556889999864
No 52
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.58 E-value=5.6e-07 Score=94.80 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=63.3
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHH---HHHhccCCCcEEEEccCcccc
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGM---CFMMDKGGEDICYIQFPQRFE 665 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~am---cff~Dp~g~~vafVQfPQ~F~ 665 (1124)
+.++..+++.| +|+|+|.+++.+.- .+++||+.+|+|.++ +|++|.+++ ..+.. ++.++.+ .|+...
T Consensus 49 i~~i~~~~n~G-----~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~~~--~~~~~~~-~~~~~~ 118 (237)
T cd02526 49 IELIHLGENLG-----IAKALNIGIKAALE-NGADYVLLFDQDSVP-PPDMVEKLLAYKILSDK--NSNIGAV-GPRIID 118 (237)
T ss_pred EEEEECCCcee-----hHHhhhHHHHHHHh-CCCCEEEEECCCCCc-CHhHHHHHHHHHHhhcc--CCCeEEE-eeeEEc
Confidence 56666666544 99999998886421 256999999999999 699999985 22221 3456554 455443
Q ss_pred CCCcchhhHHHHHHHH-hhHHHHhhhc-CCcccccccceeehhhhcC
Q 042084 666 GIDPSDRYANNNTVFF-DGNMRALDGL-QGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 666 nid~~D~yan~~~vFf-dv~~~glDGl-qGp~yvGTGcvfRR~ALyg 710 (1124)
.......+..+...++ .......... ......|+|+++||+++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 165 (237)
T cd02526 119 RRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK 165 (237)
T ss_pred CCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH
Confidence 2221111111100000 0000011111 2334568889999998864
No 53
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.54 E-value=6e-06 Score=86.83 Aligned_cols=42 Identities=21% Similarity=0.205 Sum_probs=36.0
Q ss_pred CCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhc
Q 042084 603 NKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMD 649 (1124)
Q Consensus 603 ~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~D 649 (1124)
...+.|+|.+++. ++|+||+.+|+|.+. .|+.|.+.+..+.+
T Consensus 70 ~G~~~a~N~g~~~----a~gd~i~~lD~D~~~-~~~~l~~~~~~~~~ 111 (219)
T cd06913 70 KGVGYAKNQAIAQ----SSGRYLCFLDSDDVM-MPQRIRLQYEAALQ 111 (219)
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCccC-ChhHHHHHHHHHHh
Confidence 4688999999886 589999999999998 68999988777765
No 54
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.53 E-value=1.6e-07 Score=91.22 Aligned_cols=111 Identities=18% Similarity=0.165 Sum_probs=76.0
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.|+.++++- .+++|+|.+++. ..++||+.+|+|.++ .+++|.+.+.++.+. +..+.+........+..
T Consensus 55 i~~i~~~~n~-----g~~~~~n~~~~~----a~~~~i~~ld~D~~~-~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 123 (169)
T PF00535_consen 55 IRYIRNPENL-----GFSAARNRGIKH----AKGEYILFLDDDDII-SPDWLEELVEALEKN-PPDVVIGSVIYIDDDNR 123 (169)
T ss_dssp EEEEEHCCCS-----HHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHC-TTEEEEEEEEEEECTTE
T ss_pred cccccccccc-----cccccccccccc----cceeEEEEeCCCceE-cHHHHHHHHHHHHhC-CCcEEEEEEEEecCCcc
Confidence 8888888753 599999999987 478899999999999 588999999999984 23444444443333322
Q ss_pred cchhhH--HHHHHHHhhHHHHhhhcCCcccccccceeehhhhcC
Q 042084 669 PSDRYA--NNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 669 ~~D~ya--n~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
...... .....++............+.++|.++++||+++..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 124 YPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp TEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred ccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 221111 112334444455556677788999999999999864
No 55
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.53 E-value=3.2e-06 Score=88.13 Aligned_cols=60 Identities=15% Similarity=0.062 Sum_probs=45.9
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFP 661 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfP 661 (1124)
+.++..+++. .|++|+|.+++. +.+++|+.+|+|..+ +|+.|...+..+.++ +...|..+
T Consensus 55 i~~~~~~~n~-----G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~---~~~~v~g~ 114 (224)
T cd06442 55 VRLIVRPGKR-----GLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEYIPELLEAQLEG---GADLVIGS 114 (224)
T ss_pred eEEEecCCCC-----ChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHHHHHHHHHHhcC---CCCEEEEe
Confidence 4445555544 489999999987 468999999999999 699999999998764 33445444
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.50 E-value=7.3e-07 Score=86.38 Aligned_cols=110 Identities=25% Similarity=0.271 Sum_probs=65.8
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
.+++..+++. .|+.|+|.+++.+ ++++|+.+|+|.++ .|++|.+.+..+.. +++++.|+..+...+..
T Consensus 55 ~~~~~~~~~~-----g~~~~~n~~~~~~----~~~~i~~~D~D~~~-~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~ 122 (180)
T cd06423 55 VLVVRDKENG-----GKAGALNAGLRHA----KGDIVVVLDADTIL-EPDALKRLVVPFFA--DPKVGAVQGRVRVRNGS 122 (180)
T ss_pred EEEEEecccC-----CchHHHHHHHHhc----CCCEEEEECCCCCc-ChHHHHHHHHHhcc--CCCeeeEeeeEEEecCc
Confidence 4555555544 4999999999873 89999999999999 69999998555553 24666666554443332
Q ss_pred cc--hhh-HHHHHHHHhhHHHHhhhcCC-cccccccceeehhhhcC
Q 042084 669 PS--DRY-ANNNTVFFDGNMRALDGLQG-PFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 669 ~~--D~y-an~~~vFfdv~~~glDGlqG-p~yvGTGcvfRR~ALyg 710 (1124)
.+ ..+ .......+.....+...... ..+.|+++++||++|..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 168 (180)
T cd06423 123 ENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALRE 168 (180)
T ss_pred CcceeccchheecceeeeeeehhheecceeecCchHHHHHHHHHHH
Confidence 11 000 01111111111122111222 34688888999998864
No 57
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.48 E-value=3.9e-06 Score=86.67 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=58.4
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.|+.-+++. ..+.|+|.+++.+- ...+++++.+|+|.++ +|++|++.+..+.++ +++.|. |.++..-.
T Consensus 53 i~~~~~~~n~-----g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~-~~~~l~~l~~~~~~~---~~~~~~-~~~~~~~~ 121 (202)
T cd04185 53 IVYLRLPENL-----GGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP-DPDALEKLLAYADKD---NPQFLA-PLVLDPDG 121 (202)
T ss_pred eEEEECcccc-----chhhHHHHHHHHHh-ccCCCEEEEeCCCCCc-ChHHHHHHHHHHhcC---CceEec-ceeEcCCC
Confidence 4555555543 47888888777542 3578999999999999 699999999988754 566553 44433210
Q ss_pred cchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcC
Q 042084 669 PSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYG 710 (1124)
Q Consensus 669 ~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg 710 (1124)
.++|.++||+++..
T Consensus 122 ----------------------------~~~~~~~~~~~~~~ 135 (202)
T cd04185 122 ----------------------------SFVGVLISRRVVEK 135 (202)
T ss_pred ----------------------------ceEEEEEeHHHHHH
Confidence 45678999999864
No 58
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.26 E-value=2.3e-05 Score=87.75 Aligned_cols=52 Identities=12% Similarity=0.174 Sum_probs=42.8
Q ss_pred cEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhc
Q 042084 588 LFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMD 649 (1124)
Q Consensus 588 ~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~D 649 (1124)
++.|+..+++. +++.|+|.++.. ++|+||+.+|+|.+. .|+.|.+.+-++..
T Consensus 61 ri~~i~~~~n~-----G~~~a~N~gi~~----a~g~~I~~lDaDD~~-~p~~l~~~~~~~~~ 112 (279)
T PRK10018 61 RITYIHNDINS-----GACAVRNQAIML----AQGEYITGIDDDDEW-TPNRLSVFLAHKQQ 112 (279)
T ss_pred CEEEEECCCCC-----CHHHHHHHHHHH----cCCCEEEEECCCCCC-CccHHHHHHHHHHh
Confidence 47777766654 499999999986 589999999999999 59999988887654
No 59
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.25 E-value=9.8e-06 Score=92.30 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=40.2
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEE
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYI 658 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafV 658 (1124)
+.++|.|.++.. ..|+||+.+|+|-++ .|+.+.+.+..+.+. +.++++.
T Consensus 72 G~~~arN~gl~~----a~g~yi~flD~DD~~-~p~~l~~l~~~~~~~-~~dvv~~ 120 (328)
T PRK10073 72 GVSVARNTGLAV----ATGKYVAFPDADDVV-YPTMYETLMTMALED-DLDVAQC 120 (328)
T ss_pred ChHHHHHHHHHh----CCCCEEEEECCCCcc-ChhHHHHHHHHHHhC-CCCEEEE
Confidence 589999999986 589999999999999 699999999887653 3455443
No 60
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.23 E-value=5.3e-05 Score=79.26 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=42.1
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhcc
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDK 650 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp 650 (1124)
+.++..+++. .|++|+|.+++. +.+++|+.+|+|... +|+++.+.+..+.++
T Consensus 59 i~~i~~~~n~-----G~~~a~~~g~~~----a~gd~i~~ld~D~~~-~~~~l~~l~~~~~~~ 110 (211)
T cd04188 59 IRVLTLPKNR-----GKGGAVRAGMLA----ARGDYILFADADLAT-PFEELEKLEEALKTS 110 (211)
T ss_pred EEEEEcccCC-----CcHHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhcc
Confidence 3455554443 499999999987 478999999999999 699999999997764
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.19 E-value=4.6e-05 Score=77.03 Aligned_cols=110 Identities=16% Similarity=0.126 Sum_probs=67.7
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++..+++.| |++|+|.+++. +.+++|+.+|+|-.+ .|+.|.+.+..+... +..+|+.+....+..
T Consensus 56 ~~~~~~~~n~G-----~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~---~~~~v~g~~~~~~~~ 122 (185)
T cd04179 56 VRVIRLSRNFG-----KGAAVRAGFKA----ARGDIVVTMDADLQH-PPEDIPKLLEKLLEG---GADVVIGSRFVRGGG 122 (185)
T ss_pred eEEEEccCCCC-----ccHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhcc---CCcEEEEEeecCCCc
Confidence 45555666555 99999998886 478999999999999 699999999986653 456677766554432
Q ss_pred c-chhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCC
Q 042084 669 P-SDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGF 711 (1124)
Q Consensus 669 ~-~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~ 711 (1124)
. ...+.....-.+......+.+..-....|...++||+++..+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 166 (185)
T cd04179 123 AGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEAL 166 (185)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHH
Confidence 1 111111111111112222222222333444557999999764
No 62
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.01 E-value=4.2e-05 Score=95.41 Aligned_cols=166 Identities=20% Similarity=0.173 Sum_probs=106.1
Q ss_pred hHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHh-ccCCCcEEEEccCccccCCCcchhhH-HHHHH-HHhh
Q 042084 607 GAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMM-DKGGEDICYIQFPQRFEGIDPSDRYA-NNNTV-FFDG 683 (1124)
Q Consensus 607 GALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~-Dp~g~~vafVQfPQ~F~nid~~D~ya-n~~~v-Ffdv 683 (1124)
=.||.+... ++.+-.||+.+|+|..+ +|++|.+++.-|- || +||-+.. +-.|.-..=.-+ ++.+. .-..
T Consensus 428 ~~~y~~~~~--L~~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp---~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~ 499 (862)
T KOG2571|consen 428 WVMYTAFKA--LMPSVDYILVVDADTRL-DPDALYHLVKVFDEDP---QVGGACG--RILNKGGSWVVAYQNFEYAISHN 499 (862)
T ss_pred HHHHHHHHH--hcCcceEEEEecCCCcc-CcHHHHHHHHHhccCc---ccceecc--ccccCCCceEEeHHHHHHHHHHH
Confidence 344544432 35666799999999999 7999999999886 65 5655544 222211110000 11111 1124
Q ss_pred HHHHhhhcCCcccccccc--eeehhhhcCCCCCCCCCCCCCCccccccCCCCCCCccccccccccccCCcchhhcchhhh
Q 042084 684 NMRALDGLQGPFYVGTGT--MFRRFALYGFDPPDPNKNPQNKDTEMHALNPTDFDSDLDVNLLPKRFGNSTMLAESIPIA 761 (1124)
Q Consensus 684 ~~~glDGlqGp~yvGTGc--vfRR~ALyg~~pp~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~~ 761 (1124)
.+++.+..-|-+.|=.|| +||-+||.+=. ++..+|.
T Consensus 500 l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~-------------------------------~~~~y~~----------- 537 (862)
T KOG2571|consen 500 LQKATESVFGCVSCLPGCFSLYRASALMDQF-------------------------------VEYFYGE----------- 537 (862)
T ss_pred HHHhhhhhceeEEecCchhHHHHHHHHhcch-------------------------------HHhhhch-----------
Confidence 567777777777666665 68999997510 0111221
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccccccccccccccccccCcccchHHHHHHHHhCCceEE
Q 042084 762 EFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWHSV 841 (1124)
Q Consensus 762 e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T~WG~evGw~ygSVTEDi~TglrLh~rGWrSv 841 (1124)
.+..| +-|.. .+..||=.+..++..+||+.-
T Consensus 538 -~~~~~-----------------------------------------------~~~~~-~~~geDR~L~~~llskgy~l~ 568 (862)
T KOG2571|consen 538 -KFSGP-----------------------------------------------RHGIQ-YSLGEDRWLCTLLLSKGYRLK 568 (862)
T ss_pred -hhcCc-----------------------------------------------ccccc-cccchhHHHHHHHHhccceee
Confidence 00000 00222 348999999999999999999
Q ss_pred EeccCCccccccCCCCHHHHHHHhhhhhcchh
Q 042084 842 YCVTKRDAFRGSAPINLTDRLHQVLRWATGSV 873 (1124)
Q Consensus 842 Y~~P~r~af~G~aP~tL~a~l~QR~RWA~G~l 873 (1124)
||. ++....++|+++.+++.||+||..|.+
T Consensus 569 Y~a--~s~a~t~~Pe~~~efl~QrrRW~~s~f 598 (862)
T KOG2571|consen 569 YVA--ASDAETEAPESFLEFLNQRRRWLNSIF 598 (862)
T ss_pred eec--cccccccCcHhHHHHHHHhhhhcccch
Confidence 995 355679999999999999999999943
No 63
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=97.99 E-value=3.9e-05 Score=84.31 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=51.5
Q ss_pred CCcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEcc
Q 042084 586 LPLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQF 660 (1124)
Q Consensus 586 lP~LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQf 660 (1124)
.|.+.|+.-+++.| .|+|+|.+++..- -.++++|+.+|.|.++ .++.|.+.+..+... +.+++.|..
T Consensus 44 ~~~i~~i~~~~N~G-----~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~-~~~~~~~~~ 110 (281)
T TIGR01556 44 GQKIALIHLGDNQG-----IAGAQNQGLDASF-RRGVQGVLLLDQDSRP-GNAFLAAQWKLLSAE-NGQACALGP 110 (281)
T ss_pred CCCeEEEECCCCcc-----hHHHHHHHHHHHH-HCCCCEEEEECCCCCC-CHHHHHHHHHHHHhc-CCceEEECC
Confidence 35688887776655 8999999887631 1368999999999999 699999999887642 237787763
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=97.90 E-value=0.00038 Score=70.84 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=65.5
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCC
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGID 668 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid 668 (1124)
+.++..+++. .|++|+|++++. +.+++|+.+|+|..+ +++.|.+.+.. +++ +.++.+.+.... +..
T Consensus 57 i~~i~~~~n~-----G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~-~~~-~~~~v~g~~~~~--~~~ 122 (181)
T cd04187 57 VKVIRLSRNF-----GQQAALLAGLDH----ARGDAVITMDADLQD-PPELIPEMLAK-WEE-GYDVVYGVRKNR--KES 122 (181)
T ss_pred EEEEEecCCC-----CcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHHHHHHHH-HhC-CCcEEEEEecCC--cch
Confidence 5555555543 499999999986 478999999999999 69999999987 443 345544332221 111
Q ss_pred cchhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCC
Q 042084 669 PSDRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGF 711 (1124)
Q Consensus 669 ~~D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~ 711 (1124)
...++.+ ..++. ......+..-+...|+.+++||+++..+
T Consensus 123 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~i 162 (181)
T cd04187 123 WLKRLTS--KLFYR-LINKLSGVDIPDNGGDFRLMDRKVVDAL 162 (181)
T ss_pred HHHHHHH--HHHHH-HHHHHcCCCCCCCCCCEEEEcHHHHHHH
Confidence 1111111 12222 1222333444556788889999999753
No 65
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=97.81 E-value=0.00065 Score=64.22 Aligned_cols=51 Identities=24% Similarity=0.249 Sum_probs=40.3
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccC
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFP 661 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfP 661 (1124)
.|++++|.++..+ ++++++++|+|.++ .|+.+...+-.+.. .++...|+.+
T Consensus 64 g~~~~~~~~~~~~----~~d~v~~~d~D~~~-~~~~~~~~~~~~~~--~~~~~~v~~~ 114 (156)
T cd00761 64 GLAAARNAGLKAA----RGEYILFLDADDLL-LPDWLERLVAELLA--DPEADAVGGP 114 (156)
T ss_pred ChHHHHHHHHHHh----cCCEEEEECCCCcc-CccHHHHHHHHHhc--CCCceEEecc
Confidence 5999999988864 79999999999999 68998887444443 2467777776
No 66
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=97.77 E-value=0.0019 Score=74.11 Aligned_cols=62 Identities=19% Similarity=0.180 Sum_probs=44.5
Q ss_pred EEEEEccCCCCCCCCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEcc
Q 042084 589 FVYMSREKRPGYEHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQF 660 (1124)
Q Consensus 589 LvYVSREKrpg~~H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQf 660 (1124)
+..+..+++. +|++|+|++++. +.|++|+++|+|... +++.+.+.+..+.+-....++.|..
T Consensus 139 i~vi~~~~N~-----G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~~~~~~~dvV~G 200 (333)
T PTZ00260 139 IRLLSLLRNK-----GKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLKIEQNGLGIVFG 200 (333)
T ss_pred EEEEEcCCCC-----ChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHHhhccCCceEEe
Confidence 4445444443 499999999986 479999999999999 6999888888776411123444444
No 67
>PRK10063 putative glycosyl transferase; Provisional
Probab=97.74 E-value=0.0009 Score=73.44 Aligned_cols=44 Identities=14% Similarity=0.043 Sum_probs=33.7
Q ss_pred CcccEEEeCCCCCCCChHHHHHHHHHHHcc-CCCCCCcEEEEeCCCCch
Q 042084 370 PGIDMYVSTADPEKEPPLTTANTILSILAV-DYPVEKLACYVSDDGGAL 417 (1124)
Q Consensus 370 P~VDvfV~T~DP~~EPp~~~~nTvlS~la~-DYP~~kl~~YvsDDG~s~ 417 (1124)
|.|-|+|+|+ +|+ .....|+-|++++ ..+...+.+.|.|||...
T Consensus 1 ~~vSVIi~~y---N~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD 45 (248)
T PRK10063 1 MLLSVITVAF---RNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSND 45 (248)
T ss_pred CeEEEEEEeC---CCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcc
Confidence 5688999999 664 4678888888764 234447899999999865
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=97.56 E-value=0.0016 Score=73.27 Aligned_cols=70 Identities=17% Similarity=0.186 Sum_probs=52.1
Q ss_pred CcEEEEEccCCCCCCCCCchhHHHHHHHhccccCCCC-EEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCcccc
Q 042084 587 PLFVYMSREKRPGYEHNKKAGAMNALVRASAILSNGP-FILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFE 665 (1124)
Q Consensus 587 P~LvYVSREKrpg~~H~~KAGALNallRvSavlsngp-fIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~ 665 (1124)
|.+.++.-.++-| =||+.|.+++.. +.++. +++.|+-|.++ ++++|.+.+-.+... +.++.|+.-.+.+
T Consensus 56 ~~v~~i~~~~NlG-----~agg~n~g~~~a--~~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~~--~~~~~~~~~i~~~ 125 (305)
T COG1216 56 PNVRLIENGENLG-----FAGGFNRGIKYA--LAKGDDYVLLLNPDTVV-EPDLLEELLKAAEED--PAAGVVGPLIRNY 125 (305)
T ss_pred CcEEEEEcCCCcc-----chhhhhHHHHHH--hcCCCcEEEEEcCCeee-ChhHHHHHHHHHHhC--CCCeEeeeeEecC
Confidence 4467777767766 488889877764 24544 99999999888 799999999988752 5777777766554
Q ss_pred C
Q 042084 666 G 666 (1124)
Q Consensus 666 n 666 (1124)
+
T Consensus 126 ~ 126 (305)
T COG1216 126 D 126 (305)
T ss_pred C
Confidence 4
No 69
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=97.29 E-value=0.0016 Score=72.54 Aligned_cols=101 Identities=12% Similarity=0.161 Sum_probs=62.9
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEEccCccccCCCcchhhHHHHHHHHh-
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYIQFPQRFEGIDPSDRYANNNTVFFD- 682 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafVQfPQ~F~nid~~D~yan~~~vFfd- 682 (1124)
.+|.|.|.++.. +++++|+.+|+|+++ .|+++.+++.+...-.....+++-.|..|.+.+.+..+-.....+.+
T Consensus 75 ~~a~arN~g~~~----A~~d~l~flD~D~i~-~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~ 149 (281)
T PF10111_consen 75 SRAKARNIGAKY----ARGDYLIFLDADCIP-SPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFYSQFKNLWDH 149 (281)
T ss_pred CHHHHHHHHHHH----cCCCEEEEEcCCeee-CHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHhhcchhcchH
Confidence 699999999986 589999999999999 69999999994332111234566667777765544433222211111
Q ss_pred ----hHHHH-hhhcCCcccccccceeehhhhc
Q 042084 683 ----GNMRA-LDGLQGPFYVGTGTMFRRFALY 709 (1124)
Q Consensus 683 ----v~~~g-lDGlqGp~yvGTGcvfRR~ALy 709 (1124)
-...+ .+.+.....+|++.++||+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~ 181 (281)
T PF10111_consen 150 EFLESFISGKNSLWEFIAFASSCFLINREDFL 181 (281)
T ss_pred HHHHHHhhccccccccccccceEEEEEHHHHH
Confidence 11111 1222233446677778888774
No 70
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=97.03 E-value=0.00024 Score=79.85 Aligned_cols=48 Identities=29% Similarity=0.925 Sum_probs=40.3
Q ss_pred ccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcC-CCCCCCCCCCc
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDT-GLCPGCKEPYK 183 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~ 183 (1124)
-|.+ |-+.+-.+ ..-|.||.|||.|||.||.-.+.+- |.||.|+.-|+
T Consensus 16 ~cpl--cie~mdit--dknf~pc~cgy~ic~fc~~~irq~lngrcpacrr~y~ 64 (480)
T COG5175 16 YCPL--CIEPMDIT--DKNFFPCPCGYQICQFCYNNIRQNLNGRCPACRRKYD 64 (480)
T ss_pred cCcc--cccccccc--cCCcccCCcccHHHHHHHHHHHhhccCCChHhhhhcc
Confidence 4888 87775443 5669999999999999998877777 99999999996
No 71
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=96.87 E-value=0.0082 Score=68.29 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=41.3
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHh-ccCCCcEEEEcc
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMM-DKGGEDICYIQF 660 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~-Dp~g~~vafVQf 660 (1124)
.|++|+|+++.. +++++|+.+|||....+|+.|.+.+..|. ++ ++++|..
T Consensus 102 Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~---~~~~V~g 152 (306)
T PRK13915 102 GKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDP---GVHLVKA 152 (306)
T ss_pred CHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCC---CceEEEE
Confidence 599999998876 58999999999997337999999998887 54 5666664
No 72
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=95.91 E-value=0.19 Score=57.78 Aligned_cols=46 Identities=22% Similarity=0.203 Sum_probs=38.5
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEE
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDIC 656 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~va 656 (1124)
.|++|+|++++. +.|++|+.+|||... +|+.+.+.+..+.+ |.++.
T Consensus 77 G~~~A~~~G~~~----A~gd~vv~~DaD~q~-~p~~i~~l~~~~~~--~~DvV 122 (325)
T PRK10714 77 GQHSAIMAGFSH----VTGDLIITLDADLQN-PPEEIPRLVAKADE--GYDVV 122 (325)
T ss_pred CHHHHHHHHHHh----CCCCEEEEECCCCCC-CHHHHHHHHHHHHh--hCCEE
Confidence 599999999986 489999999999998 69999999888754 34443
No 73
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=92.51 E-value=0.14 Score=58.50 Aligned_cols=55 Identities=18% Similarity=0.527 Sum_probs=47.2
Q ss_pred CCCccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcC-CCCCCCCCCCcCCC
Q 042084 129 KGSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDT-GLCPGCKEPYKLGD 186 (1124)
Q Consensus 129 ~g~~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r~d 186 (1124)
..+.|.+ |-.+.-++.+=..++. +|+-.+|+.|.+.-...| +.||.|+++.+..+
T Consensus 2 d~~~CP~--Ck~~~y~np~~kl~i~-~CGH~~C~sCv~~l~~~~~~~CP~C~~~lrk~~ 57 (309)
T TIGR00570 2 DDQGCPR--CKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRGSGSCPECDTPLRKNN 57 (309)
T ss_pred CCCCCCc--CCCCCccCcccccccC-CCCCcccHHHHHHHhcCCCCCCCCCCCccchhh
Confidence 3578999 9888778777778888 999999999998877778 89999999998754
No 74
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=90.27 E-value=2.8 Score=45.09 Aligned_cols=42 Identities=14% Similarity=0.220 Sum_probs=35.9
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhcc
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDK 650 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp 650 (1124)
..+.|.|.++.. ..+++|+.+|+|..+ .|+.+.+...++.+.
T Consensus 58 g~~~~~n~~~~~----a~~d~vl~lDaD~~~-~~~~~~~l~~~~~~~ 99 (229)
T cd02511 58 GFGAQRNFALEL----ATNDWVLSLDADERL-TPELADEILALLATD 99 (229)
T ss_pred ChHHHHHHHHHh----CCCCEEEEEeCCcCc-CHHHHHHHHHHHhCC
Confidence 489999988875 478899999999999 699999988887753
No 75
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=89.24 E-value=0.33 Score=56.59 Aligned_cols=55 Identities=24% Similarity=0.236 Sum_probs=43.9
Q ss_pred CCchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHHhccCCCcEEEE-ccCccc
Q 042084 603 NKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFMMDKGGEDICYI-QFPQRF 664 (1124)
Q Consensus 603 ~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff~Dp~g~~vafV-QfPQ~F 664 (1124)
|-|-.||=-+.|+ ...|+|++.|.|-.. .|+.+.+..-=||.+ .+.|+| |+|-.+
T Consensus 156 npKInN~mpgy~~----a~ydlvlisDsgI~m-~pdtildm~t~M~sh--ekmalvtq~py~~ 211 (431)
T KOG2547|consen 156 NPKINNMMPGYRA----AKYDLVLISDSGIFM-KPDTILDMATTMMSH--EKMALVTQTPYCK 211 (431)
T ss_pred ChhhhccCHHHHH----hcCCEEEEecCCeee-cCchHHHHHHhhhcc--cceeeecCCceee
Confidence 3566677667776 478999999999999 699999999999965 588888 666544
No 76
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=88.70 E-value=2.5 Score=49.36 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=38.5
Q ss_pred CCCchhHHHHHHHhccccCCCCEEEeecCCCccCchHH---HHHHHHHHhccCCCcEEEEcc
Q 042084 602 HNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKA---IREGMCFMMDKGGEDICYIQF 660 (1124)
Q Consensus 602 H~~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~---Lr~amcff~Dp~g~~vafVQf 660 (1124)
.|+|. |+|.++.. .+++++++||-|+.+ .|+| +.+++..+.+ +++|..|-.
T Consensus 83 ~hyk~-aln~vF~~----~~~~~vIILEDDl~~-sPdFf~yf~~~l~~y~~--D~~v~~ISa 136 (334)
T cd02514 83 RHYKW-ALTQTFNL----FGYSFVIILEDDLDI-APDFFSYFQATLPLLEE--DPSLWCISA 136 (334)
T ss_pred HHHHH-HHHHHHHh----cCCCEEEEECCCCcc-CHhHHHHHHHHHHHHhc--CCCEEEEEe
Confidence 34555 78877654 379999999999999 6995 4788888775 358877765
No 77
>PF14446 Prok-RING_1: Prokaryotic RING finger family 1
Probab=86.44 E-value=0.52 Score=41.14 Aligned_cols=45 Identities=38% Similarity=0.888 Sum_probs=35.3
Q ss_pred CCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcCCCCCC--CCCCCc
Q 042084 130 GSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDTGLCPG--CKEPYK 183 (1124)
Q Consensus 130 g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g~~Cp~--Ck~~y~ 183 (1124)
+..|.+ ||+++- +|++.|-| +|+-|-=|+||+++ +.|-- |++++.
T Consensus 5 ~~~C~~--Cg~~~~---~~dDiVvCp~CgapyHR~C~~~~----g~C~~~~c~~~~~ 52 (54)
T PF14446_consen 5 GCKCPV--CGKKFK---DGDDIVVCPECGAPYHRDCWEKA----GGCINYSCGTGFE 52 (54)
T ss_pred CccChh--hCCccc---CCCCEEECCCCCCcccHHHHhhC----CceEeccCCCCcc
Confidence 568999 988874 38899999 99999999999776 44544 666553
No 78
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=85.37 E-value=17 Score=46.94 Aligned_cols=199 Identities=20% Similarity=0.230 Sum_probs=114.4
Q ss_pred EccCCCCCCC--CCchhHHHHHHHhccccCCCCEEEeecC--CCccCchHHHHHHHHHHhccC---------------CC
Q 042084 593 SREKRPGYEH--NKKAGAMNALVRASAILSNGPFILNLDC--DHYIYNCKAIREGMCFMMDKG---------------GE 653 (1124)
Q Consensus 593 SREKrpg~~H--~~KAGALNallRvSavlsngpfIlnlDc--D~y~nnp~~Lr~amcff~Dp~---------------g~ 653 (1124)
-|-|=||.+. ..|.-|=|+.+ +.+.|++|-.+|+ |+|..+.--+|..+.=|.... ..
T Consensus 262 yri~LpG~pilGeGK~eNQNhai----iF~rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~ 337 (817)
T PF02364_consen 262 YRIKLPGNPILGEGKPENQNHAI----IFTRGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKR 337 (817)
T ss_pred EEEECCCCCcCCCCCccccceeE----EEEccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCC
Confidence 3445555443 46888888644 4689999999997 455522222233333333211 35
Q ss_pred cEEEEccCccccCCCcc---hhhHHHHHHHHhhHHHHhhhcCCcccccccceeehhhhcCCCCCCCCCCCCCCccccccC
Q 042084 654 DICYIQFPQRFEGIDPS---DRYANNNTVFFDGNMRALDGLQGPFYVGTGTMFRRFALYGFDPPDPNKNPQNKDTEMHAL 730 (1124)
Q Consensus 654 ~vafVQfPQ~F~nid~~---D~yan~~~vFfdv~~~glDGlqGp~yvGTGcvfRR~ALyg~~pp~~~~~~~~~~~~~~~~ 730 (1124)
.++.|=++-+-...+-+ |.-+++..+|-..-+|-+.-..+-+.-|.==+|.|
T Consensus 338 ~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~------------------------- 392 (817)
T PF02364_consen 338 PVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNR------------------------- 392 (817)
T ss_pred CceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhh-------------------------
Confidence 66777776665544332 56677888888888888776554433332222222
Q ss_pred CCCCCCccccccccccccCCcchhhcchhhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccccccccc
Q 042084 731 NPTDFDSDLDVNLLPKRFGNSTMLAESIPIAEFQGRPLADHPSVSYGRPPGALRAPRDPLDAATVAEAVSVISCWYEDKT 810 (1124)
Q Consensus 731 ~~~~~~~e~~~~~~~~~fg~s~~f~~s~~~~e~gG~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~v~sC~YE~~T 810 (1124)
+-...-||.. .|..
T Consensus 393 ---------------------------~f~~TRGGvS-----------------------------KAsk---------- 406 (817)
T PF02364_consen 393 ---------------------------IFMTTRGGVS-----------------------------KASK---------- 406 (817)
T ss_pred ---------------------------hheeccCccc-----------------------------hHhh----------
Confidence 1111123321 1111
Q ss_pred ccccccccccCcccchHHHHHHHHhCCceEEEeccCCccccccCCC-CHHHHHHHhhhhhcchhHHHhhhcccccccccc
Q 042084 811 EWGDRVGWIYGSVTEDVVTGYRMHNRGWHSVYCVTKRDAFRGSAPI-NLTDRLHQVLRWATGSVEIFFSRNNAFLASRKL 889 (1124)
Q Consensus 811 ~WG~evGw~ygSVTEDi~TglrLh~rGWrSvY~~P~r~af~G~aP~-tL~a~l~QR~RWA~G~lQIl~sk~~pLl~~~~L 889 (1124)
.=.++||+..|+...+||-++.+|. ....|-.-+ .+..-+.=-..=+.|+=|..++|.---+ +.+|
T Consensus 407 ---------~lhLsEDIfaG~n~~lRGG~i~h~e---y~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL-g~~l 473 (817)
T PF02364_consen 407 ---------GLHLSEDIFAGMNATLRGGRIKHCE---YIQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL-GTRL 473 (817)
T ss_pred ---------cccccHHHHHHHHHHhcCCceeehh---hhhcccccccCchhhhhhHhHhcCCccchhhhHHHHHh-hccC
Confidence 2368999999999999999999982 222343321 2223333334557888888887653222 5678
Q ss_pred chhcchhhhh
Q 042084 890 KLLQRLAYLN 899 (1124)
Q Consensus 890 ~l~QRL~Yl~ 899 (1124)
.+.+-|.+..
T Consensus 474 d~~R~LSfyy 483 (817)
T PF02364_consen 474 DFFRFLSFYY 483 (817)
T ss_pred CHHHHHHHHh
Confidence 8877666544
No 79
>KOG2068 consensus MOT2 transcription factor [Transcription]
Probab=83.80 E-value=0.94 Score=52.20 Aligned_cols=53 Identities=32% Similarity=0.904 Sum_probs=41.9
Q ss_pred CCccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcCCCCCCCCCCCcCCC
Q 042084 130 GSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCKEPYKLGD 186 (1124)
Q Consensus 130 g~~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~r~d 186 (1124)
...|.| |.+.. +.+-..|+||.|+|.+|-+|........+.||.|+++|.++-
T Consensus 249 ~~s~p~--~~~~~--~~~d~~~lP~~~~~~~~l~~~~t~~~~~~~~~~~rk~~~~~t 301 (327)
T KOG2068|consen 249 PPSCPI--CYEDL--DLTDSNFLPCPCGFRLCLFCHKTISDGDGRCPGCRKPYERNT 301 (327)
T ss_pred CCCCCC--CCCcc--cccccccccccccccchhhhhhcccccCCCCCccCCccccCc
Confidence 478999 65543 555677999999999999999665444499999999999853
No 80
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=81.57 E-value=2.9 Score=40.01 Aligned_cols=49 Identities=24% Similarity=0.287 Sum_probs=40.9
Q ss_pred CCcccEEEeCCCCCCCChHHHHHHHHHHHccCCCCCCcEEEEeCCCCchhhHHHH
Q 042084 369 LPGIDMYVSTADPEKEPPLTTANTILSILAVDYPVEKLACYVSDDGGALLTFEAM 423 (1124)
Q Consensus 369 lP~VDvfV~T~DP~~EPp~~~~nTvlS~la~DYP~~kl~~YvsDDG~s~lTf~aL 423 (1124)
.|.+-|+|+|+ +|+ .....+|-|++...|+. .-+.|.|||...-|-+-.
T Consensus 2 ~~~~siiip~~---n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~ 50 (291)
T COG0463 2 MPKVSVVIPTY---NEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIA 50 (291)
T ss_pred CccEEEEEecc---chh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHH
Confidence 57799999999 666 89999999999999996 559999999988544433
No 81
>PHA02862 5L protein; Provisional
Probab=73.33 E-value=2.2 Score=44.21 Aligned_cols=48 Identities=21% Similarity=0.409 Sum_probs=33.8
Q ss_pred CCccccccCCCcccccCCCCcccccccC---Cccchhhhhhhhhc-C-CCCCCCCCCCcC
Q 042084 130 GSSCGMPACDGKAMKDERGNDIIPCECR---FKICRDCYMDAQKD-T-GLCPGCKEPYKL 184 (1124)
Q Consensus 130 g~~C~i~~C~~~v~~~~~G~~f~~CeC~---f~iCr~Cy~~~~~~-g-~~Cp~Ck~~y~r 184 (1124)
+.+|.| |- ++.++..-||.|. =-+=+.|.+-=.+. + ..|++||++|.-
T Consensus 2 ~diCWI--C~-----~~~~e~~~PC~C~GS~K~VHq~CL~~WIn~S~k~~CeLCkteY~I 54 (156)
T PHA02862 2 SDICWI--CN-----DVCDERNNFCGCNEEYKVVHIKCMQLWINYSKKKECNLCKTKYNI 54 (156)
T ss_pred CCEEEE--ec-----CcCCCCcccccccCcchhHHHHHHHHHHhcCCCcCccCCCCeEEE
Confidence 468999 73 3345557899883 33457887655554 4 999999999964
No 82
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=72.33 E-value=1.8 Score=44.15 Aligned_cols=50 Identities=28% Similarity=0.744 Sum_probs=35.8
Q ss_pred CCccccccCCCcccccCCCCccccc-c-cCCccchhhhhhhhh--cC-CCCCCCCCCCcCC
Q 042084 130 GSSCGMPACDGKAMKDERGNDIIPC-E-CRFKICRDCYMDAQK--DT-GLCPGCKEPYKLG 185 (1124)
Q Consensus 130 g~~C~i~~C~~~v~~~~~G~~f~~C-e-C~f~iCr~Cy~~~~~--~g-~~Cp~Ck~~y~r~ 185 (1124)
---|.| |.+ +.. -+-|+-= | |||.||-.||--=.| .- .+||-|||-||..
T Consensus 80 lYeCnI--C~e-tS~---ee~FLKPneCCgY~iCn~Cya~LWK~~~~ypvCPvCkTSFKss 134 (140)
T PF05290_consen 80 LYECNI--CKE-TSA---EERFLKPNECCGYSICNACYANLWKFCNLYPVCPVCKTSFKSS 134 (140)
T ss_pred ceeccC--ccc-ccc---hhhcCCcccccchHHHHHHHHHHHHHcccCCCCCccccccccc
Confidence 446888 743 222 2335544 4 899999999976666 34 9999999999964
No 83
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=70.90 E-value=4.4 Score=34.95 Aligned_cols=45 Identities=20% Similarity=0.173 Sum_probs=34.1
Q ss_pred ccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcCCCCCCCCCCCcC
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCKEPYKL 184 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~r 184 (1124)
.|.| |++ ++.+ +.+ -.||+-.||.|.+.-.++.+.||-|+++...
T Consensus 3 ~Cpi--~~~-~~~~----Pv~-~~~G~v~~~~~i~~~~~~~~~cP~~~~~~~~ 47 (63)
T smart00504 3 LCPI--SLE-VMKD----PVI-LPSGQTYERRAIEKWLLSHGTDPVTGQPLTH 47 (63)
T ss_pred CCcC--CCC-cCCC----CEE-CCCCCEEeHHHHHHHHHHCCCCCCCcCCCCh
Confidence 6889 653 4554 222 2789999999999887778899999998854
No 84
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=70.00 E-value=4.5 Score=31.53 Aligned_cols=43 Identities=26% Similarity=0.674 Sum_probs=30.2
Q ss_pred ccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcC-CCCCCCCCC
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDT-GLCPGCKEP 181 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~ 181 (1124)
.|.| |.++. .+.+..=.|+-..|..|.+.-.+.+ ..||.|+..
T Consensus 1 ~C~i--C~~~~-----~~~~~~~~C~H~~c~~C~~~~~~~~~~~Cp~C~~~ 44 (45)
T cd00162 1 ECPI--CLEEF-----REPVVLLPCGHVFCRSCIDKWLKSGKNTCPLCRTP 44 (45)
T ss_pred CCCc--Cchhh-----hCceEecCCCChhcHHHHHHHHHhCcCCCCCCCCc
Confidence 3777 65554 2222222588899999998776666 889999975
No 85
>KOG0006 consensus E3 ubiquitin-protein ligase (Parkin protein) [Posttranslational modification, protein turnover, chaperones]
Probab=65.42 E-value=5 Score=46.09 Aligned_cols=41 Identities=24% Similarity=0.718 Sum_probs=31.3
Q ss_pred cCCCCCCccccccCCCcccccCCCCccccc-c-cCCccchhhhh
Q 042084 125 MAGAKGSSCGMPACDGKAMKDERGNDIIPC-E-CRFKICRDCYM 166 (1124)
Q Consensus 125 ~~~~~g~~C~i~~C~~~v~~~~~G~~f~~C-e-C~f~iCr~Cy~ 166 (1124)
+.+++|-.|.-+|||..+-... ..-=|-| . |+|..||.|.|
T Consensus 310 vlq~gGVlCP~pgCG~gll~EP-D~rkvtC~~gCgf~FCR~C~e 352 (446)
T KOG0006|consen 310 VLQMGGVLCPRPGCGAGLLPEP-DQRKVTCEGGCGFAFCRECKE 352 (446)
T ss_pred eeecCCEecCCCCCCcccccCC-CCCcccCCCCchhHhHHHHHh
Confidence 3466789999999998765443 2224889 4 99999999997
No 86
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=55.88 E-value=7.4 Score=34.32 Aligned_cols=31 Identities=29% Similarity=0.824 Sum_probs=24.8
Q ss_pred ccCCccchhhhhhhhhcCCCCCCCCCCCcCCCC
Q 042084 155 ECRFKICRDCYMDAQKDTGLCPGCKEPYKLGDY 187 (1124)
Q Consensus 155 eC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~r~d~ 187 (1124)
.|+-.||+.|+.-++- .-||=|.+|...+|.
T Consensus 24 pCgH~I~~~~f~~~rY--ngCPfC~~~~~~~~~ 54 (55)
T PF14447_consen 24 PCGHLICDNCFPGERY--NGCPFCGTPFEFDDP 54 (55)
T ss_pred cccceeeccccChhhc--cCCCCCCCcccCCCC
Confidence 5788999999965544 569999999988664
No 87
>KOG3800 consensus Predicted E3 ubiquitin ligase containing RING finger, subunit of transcription/repair factor TFIIH and CDK-activating kinase assembly factor [Posttranslational modification, protein turnover, chaperones]
Probab=55.57 E-value=7.8 Score=44.26 Aligned_cols=50 Identities=20% Similarity=0.477 Sum_probs=36.5
Q ss_pred ccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcC-CCCCCCCCCCcC
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDT-GLCPGCKEPYKL 184 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g-~~Cp~Ck~~y~r 184 (1124)
.|.+ |-.++-++.+=...+- +|+.++|..|+.---.-| +.||.|.+....
T Consensus 2 ~Cp~--CKt~~Y~np~lk~~in-~C~H~lCEsCvd~iF~~g~~~CpeC~~iLRk 52 (300)
T KOG3800|consen 2 ACPK--CKTDRYLNPDLKLMIN-ECGHRLCESCVDRIFSLGPAQCPECMVILRK 52 (300)
T ss_pred CCcc--cccceecCccceeeec-cccchHHHHHHHHHHhcCCCCCCcccchhhh
Confidence 4666 6556666544333333 999999999996555667 999999998875
No 88
>PHA02929 N1R/p28-like protein; Provisional
Probab=55.20 E-value=13 Score=41.70 Aligned_cols=54 Identities=28% Similarity=0.655 Sum_probs=37.6
Q ss_pred CCCCccccccCCCcccccCCCC-cc-cccccCCccchhhhhhhhhcCCCCCCCCCCCc
Q 042084 128 AKGSSCGMPACDGKAMKDERGN-DI-IPCECRFKICRDCYMDAQKDTGLCPGCKEPYK 183 (1124)
Q Consensus 128 ~~g~~C~i~~C~~~v~~~~~G~-~f-~~CeC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~ 183 (1124)
..+..|.| |.+.+..++..+ .| +...|+-.-|+.|...-.+..+.||-|+.++.
T Consensus 172 ~~~~eC~I--Cle~~~~~~~~~~~~~vl~~C~H~FC~~CI~~Wl~~~~tCPlCR~~~~ 227 (238)
T PHA02929 172 SKDKECAI--CMEKVYDKEIKNMYFGILSNCNHVFCIECIDIWKKEKNTCPVCRTPFI 227 (238)
T ss_pred CCCCCCcc--CCcccccCccccccceecCCCCCcccHHHHHHHHhcCCCCCCCCCEee
Confidence 44679999 877765443111 12 33489999999999765554499999998763
No 89
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=52.52 E-value=7.2 Score=31.81 Aligned_cols=43 Identities=23% Similarity=0.624 Sum_probs=33.6
Q ss_pred ccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcCCCCCCCC
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCK 179 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g~~Cp~Ck 179 (1124)
.|.| |-+++.. ++.++...|+=..|+.|...-.+..+.||-|+
T Consensus 2 ~C~I--C~~~~~~---~~~~~~l~C~H~fh~~Ci~~~~~~~~~CP~CR 44 (44)
T PF13639_consen 2 ECPI--CLEEFED---GEKVVKLPCGHVFHRSCIKEWLKRNNSCPVCR 44 (44)
T ss_dssp CETT--TTCBHHT---TSCEEEETTSEEEEHHHHHHHHHHSSB-TTTH
T ss_pred CCcC--CChhhcC---CCeEEEccCCCeeCHHHHHHHHHhCCcCCccC
Confidence 5889 8777644 67777778999999999977766668999985
No 90
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=51.41 E-value=7.5 Score=44.68 Aligned_cols=38 Identities=32% Similarity=0.775 Sum_probs=29.5
Q ss_pred CCCccccc-ccCCcc--------ch--hhhhhhhhcC-CCCCCCCCCCcC
Q 042084 147 RGNDIIPC-ECRFKI--------CR--DCYMDAQKDT-GLCPGCKEPYKL 184 (1124)
Q Consensus 147 ~G~~f~~C-eC~f~i--------Cr--~Cy~~~~~~g-~~Cp~Ck~~y~r 184 (1124)
.|.-+--| .|+||| |+ .||+-+|.+. ++||+|-++..|
T Consensus 86 l~p~VHfCd~Cd~PI~IYGRmIPCkHvFCl~CAr~~~dK~Cp~C~d~Vqr 135 (389)
T KOG2932|consen 86 LGPRVHFCDRCDFPIAIYGRMIPCKHVFCLECARSDSDKICPLCDDRVQR 135 (389)
T ss_pred cCcceEeecccCCcceeeecccccchhhhhhhhhcCccccCcCcccHHHH
Confidence 45555667 799888 54 6888888888 999999887765
No 91
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=48.45 E-value=20 Score=39.03 Aligned_cols=60 Identities=18% Similarity=0.485 Sum_probs=37.2
Q ss_pred hcccCCCCcCCC-CCCccccccCCCcccccCCCCcccccccCCccchhhhhhhh---------------hcC-CCCCCCC
Q 042084 117 ESQVNHPQMAGA-KGSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQ---------------KDT-GLCPGCK 179 (1124)
Q Consensus 117 ~~~~~~~~~~~~-~g~~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~---------------~~g-~~Cp~Ck 179 (1124)
+.|.+...+... +.-.|.| |-+.+ . +..+ -.|+-..|+.|...-. +.+ ..||-||
T Consensus 4 ~~~~~~~~~~~~~~~~~CpI--Cld~~-~----dPVv-T~CGH~FC~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR 75 (193)
T PLN03208 4 EKDEDDTTLVDSGGDFDCNI--CLDQV-R----DPVV-TLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCK 75 (193)
T ss_pred ccccccceeccCCCccCCcc--CCCcC-C----CcEE-cCCCchhHHHHHHHHHHhccccccccccccccCCCCcCCCCC
Confidence 344443333333 3558999 86653 1 2222 2799999999996421 112 7899999
Q ss_pred CCCcC
Q 042084 180 EPYKL 184 (1124)
Q Consensus 180 ~~y~r 184 (1124)
++...
T Consensus 76 ~~Is~ 80 (193)
T PLN03208 76 SDVSE 80 (193)
T ss_pred CcCCh
Confidence 99864
No 92
>PRK12495 hypothetical protein; Provisional
Probab=47.82 E-value=12 Score=41.38 Aligned_cols=16 Identities=31% Similarity=0.875 Sum_probs=13.5
Q ss_pred hcC-CCCCCCCCCCcCC
Q 042084 170 KDT-GLCPGCKEPYKLG 185 (1124)
Q Consensus 170 ~~g-~~Cp~Ck~~y~r~ 185 (1124)
..| .+||.|.+.+.++
T Consensus 55 ~pG~~~Cp~CQ~~~~~~ 71 (226)
T PRK12495 55 HDGQEFCPTCQQPVTED 71 (226)
T ss_pred CCCeeECCCCCCccccc
Confidence 377 8999999999873
No 93
>PRK00420 hypothetical protein; Validated
Probab=47.34 E-value=7.5 Score=38.87 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=15.0
Q ss_pred hcC-CCCCCCCCCCcCCCCCC
Q 042084 170 KDT-GLCPGCKEPYKLGDYDD 189 (1124)
Q Consensus 170 ~~g-~~Cp~Ck~~y~r~d~~~ 189 (1124)
++| -.||.|++.+...++|+
T Consensus 37 k~g~~~Cp~Cg~~~~v~~~ee 57 (112)
T PRK00420 37 KDGEVVCPVHGKVYIVKSDEE 57 (112)
T ss_pred CCCceECCCCCCeeeeccHHH
Confidence 445 88999999998766543
No 94
>PHA02825 LAP/PHD finger-like protein; Provisional
Probab=44.20 E-value=17 Score=38.36 Aligned_cols=49 Identities=18% Similarity=0.546 Sum_probs=34.9
Q ss_pred CCCccccccCCCcccccCCCCcccccccCC---ccchhhhhhhhhcC--CCCCCCCCCCcC
Q 042084 129 KGSSCGMPACDGKAMKDERGNDIIPCECRF---KICRDCYMDAQKDT--GLCPGCKEPYKL 184 (1124)
Q Consensus 129 ~g~~C~i~~C~~~v~~~~~G~~f~~CeC~f---~iCr~Cy~~~~~~g--~~Cp~Ck~~y~r 184 (1124)
.+..|.| |-++ .++..-||.|.= -+=+.|.+.=.+++ ..|+.|+++|.-
T Consensus 7 ~~~~CRI--C~~~-----~~~~~~PC~CkGs~k~VH~sCL~rWi~~s~~~~CeiC~~~Y~i 60 (162)
T PHA02825 7 MDKCCWI--CKDE-----YDVVTNYCNCKNENKIVHKECLEEWINTSKNKSCKICNGPYNI 60 (162)
T ss_pred CCCeeEe--cCCC-----CCCccCCcccCCCchHHHHHHHHHHHhcCCCCcccccCCeEEE
Confidence 4669999 6322 334457998865 34678987665544 999999999974
No 95
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=43.45 E-value=1.3e+02 Score=32.89 Aligned_cols=59 Identities=8% Similarity=0.158 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCchh--HHHHHHHHHHHHHHHHHHHHHHhccCCCcc
Q 042084 1028 PIVIAMVNIVAMVIAFLRTIYATNPSWSK--FIGGAFFSFWVLAHLYPFAKGLMGRRGKTP 1086 (1124)
Q Consensus 1028 ~~tLllLnLvAiv~Gv~r~i~~~~~~w~~--l~g~l~~~fWvl~nL~Pf~kgL~gRkgr~P 1086 (1124)
-..|+++.+++++-|+.-++.......|. ++...+..+++++.+|-++--+.+-+++.|
T Consensus 99 DssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~ 159 (226)
T COG4858 99 DSSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRP 159 (226)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCC
Confidence 34567788888888887777544332332 222335566788888877776666444333
No 96
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=42.78 E-value=18 Score=43.28 Aligned_cols=53 Identities=15% Similarity=0.439 Sum_probs=35.1
Q ss_pred CcCCCC-CCccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcCCCCCCCCCCCcC
Q 042084 124 QMAGAK-GSSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCKEPYKL 184 (1124)
Q Consensus 124 ~~~~~~-g~~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~r 184 (1124)
.+..+. .-.|.| |.+.. . ++++. .|+--.|..|..........||.|+.++..
T Consensus 19 ~l~~Le~~l~C~I--C~d~~-~----~Pvit-pCgH~FCs~CI~~~l~~~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 19 SLYPLDTSLRCHI--CKDFF-D----VPVLT-SCSHTFCSLCIRRCLSNQPKCPLCRAEDQE 72 (397)
T ss_pred cccccccccCCCc--Cchhh-h----CccCC-CCCCchhHHHHHHHHhCCCCCCCCCCcccc
Confidence 344444 358999 74322 1 11111 799999999998766555789999998753
No 97
>KOG0320 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=40.27 E-value=18 Score=38.97 Aligned_cols=46 Identities=26% Similarity=0.673 Sum_probs=35.3
Q ss_pred CccccccCCCcccccCCCCcccccccCCccchhhhhhhhhcCCCCCCCCCCC
Q 042084 131 SSCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDAQKDTGLCPGCKEPY 182 (1124)
Q Consensus 131 ~~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y 182 (1124)
-.|.| |-+.+-. ++-|+=+||---|+.|-++++|.+..||-|+...
T Consensus 132 ~~CPi--Cl~~~se----k~~vsTkCGHvFC~~Cik~alk~~~~CP~C~kkI 177 (187)
T KOG0320|consen 132 YKCPI--CLDSVSE----KVPVSTKCGHVFCSQCIKDALKNTNKCPTCRKKI 177 (187)
T ss_pred cCCCc--eecchhh----ccccccccchhHHHHHHHHHHHhCCCCCCccccc
Confidence 47888 6444422 2235559999999999999999999999999743
No 98
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=36.65 E-value=73 Score=34.94 Aligned_cols=48 Identities=21% Similarity=0.289 Sum_probs=38.1
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHHHHHHHH-hccCCCcEEEE
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIREGMCFM-MDKGGEDICYI 658 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr~amcff-~Dp~g~~vafV 658 (1124)
.-|-|.|++++. +.++|++.+.=|..+.+++++.+.+-.| .|| ++|.|
T Consensus 41 s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~---~~G~i 89 (217)
T PF13712_consen 41 SMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP---NIGMI 89 (217)
T ss_dssp -TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T---TEEEE
T ss_pred CHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC---CccEE
Confidence 478899999886 6899999999999999999999999999 675 76554
No 99
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=35.86 E-value=21 Score=40.67 Aligned_cols=43 Identities=26% Similarity=0.658 Sum_probs=25.0
Q ss_pred CCCCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcC-CCCCCCCC
Q 042084 127 GAKGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDT-GLCPGCKE 180 (1124)
Q Consensus 127 ~~~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g-~~Cp~Ck~ 180 (1124)
..++..|.- || |.-|+|| .|+= -||-=++.+.+.+ ..|+.|++
T Consensus 226 ~~~~~~C~~--CG--------g~rFlpC~~C~G-S~kv~~~~~~~~~~~rC~~CNE 270 (281)
T KOG2824|consen 226 CEGGGVCES--CG--------GARFLPCSNCHG-SCKVHEEEEDDGGVLRCLECNE 270 (281)
T ss_pred CCCCCcCCC--cC--------CcceEecCCCCC-ceeeeeeccCCCcEEECcccCC
Confidence 556678987 86 6679999 8962 2232222233344 55555543
No 100
>KOG2068 consensus MOT2 transcription factor [Transcription]
Probab=35.51 E-value=19 Score=41.95 Aligned_cols=28 Identities=32% Similarity=0.993 Sum_probs=22.6
Q ss_pred CCccchhhhhhhhh--cC-CCCCCCCCCCcC
Q 042084 157 RFKICRDCYMDAQK--DT-GLCPGCKEPYKL 184 (1124)
Q Consensus 157 ~f~iCr~Cy~~~~~--~g-~~Cp~Ck~~y~r 184 (1124)
+|.|||.|+---+- +. +.||-|+++|+.
T Consensus 1 ~yqIc~~cwh~i~~~~~~~grcpncr~ky~e 31 (327)
T KOG2068|consen 1 GYQICDSCWHHIATSAEKKGRCPNCRTKYKE 31 (327)
T ss_pred CceeeHHHHhccccccccccCCccccCccch
Confidence 58999999965543 22 899999999985
No 101
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=35.43 E-value=19 Score=41.26 Aligned_cols=53 Identities=28% Similarity=0.684 Sum_probs=42.2
Q ss_pred CCCcCCCCCC-ccccccCCCcccccCCCCccccc--ccCCccchhhhhhhhhcCCCCCCCCCCCcC
Q 042084 122 HPQMAGAKGS-SCGMPACDGKAMKDERGNDIIPC--ECRFKICRDCYMDAQKDTGLCPGCKEPYKL 184 (1124)
Q Consensus 122 ~~~~~~~~g~-~C~i~~C~~~v~~~~~G~~f~~C--eC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~r 184 (1124)
-|-+.++... -|.| |++- .=+|| -|+--.|-.|-..-..+--.||-|+++...
T Consensus 16 IPSL~~LDs~lrC~I--C~~~--------i~ip~~TtCgHtFCslCIR~hL~~qp~CP~Cr~~~~e 71 (391)
T COG5432 16 IPSLKGLDSMLRCRI--CDCR--------ISIPCETTCGHTFCSLCIRRHLGTQPFCPVCREDPCE 71 (391)
T ss_pred CcchhcchhHHHhhh--hhhe--------eecceecccccchhHHHHHHHhcCCCCCccccccHHh
Confidence 4667777755 8999 5432 34899 799999999998888888999999998763
No 102
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=35.15 E-value=28 Score=27.71 Aligned_cols=29 Identities=21% Similarity=0.717 Sum_probs=22.8
Q ss_pred cccccccCCccchhhhhhhhhcCCCCCCC
Q 042084 150 DIIPCECRFKICRDCYMDAQKDTGLCPGC 178 (1124)
Q Consensus 150 ~f~~CeC~f~iCr~Cy~~~~~~g~~Cp~C 178 (1124)
.++.-.|+--.|+.|.+.-.+.+..||.|
T Consensus 11 ~~~~~~CGH~fC~~C~~~~~~~~~~CP~C 39 (39)
T PF13923_consen 11 PVVVTPCGHSFCKECIEKYLEKNPKCPVC 39 (39)
T ss_dssp EEEECTTSEEEEHHHHHHHHHCTSB-TTT
T ss_pred cCEECCCCCchhHHHHHHHHHCcCCCcCC
Confidence 55555899999999998876667899987
No 103
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=33.96 E-value=36 Score=25.27 Aligned_cols=24 Identities=33% Similarity=0.832 Sum_probs=19.5
Q ss_pred ccCCccchhhhhhhhhcC-CCCCCC
Q 042084 155 ECRFKICRDCYMDAQKDT-GLCPGC 178 (1124)
Q Consensus 155 eC~f~iCr~Cy~~~~~~g-~~Cp~C 178 (1124)
.|+...|..|.+.-.+.+ ..||.|
T Consensus 15 ~C~H~~c~~C~~~~~~~~~~~CP~C 39 (39)
T smart00184 15 PCGHTFCRSCIRKWLKSGNNTCPIC 39 (39)
T ss_pred cCCChHHHHHHHHHHHhCcCCCCCC
Confidence 688889999998776656 779987
No 104
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=32.56 E-value=16 Score=41.51 Aligned_cols=60 Identities=22% Similarity=0.295 Sum_probs=34.4
Q ss_pred CCCcCCCCCCccccccCCCcccc--cCCCCc--ccccccCCccchhhhhhhhhcC--CCCCCCCCCCc
Q 042084 122 HPQMAGAKGSSCGMPACDGKAMK--DERGND--IIPCECRFKICRDCYMDAQKDT--GLCPGCKEPYK 183 (1124)
Q Consensus 122 ~~~~~~~~g~~C~i~~C~~~v~~--~~~G~~--f~~CeC~f~iCr~Cy~~~~~~g--~~Cp~Ck~~y~ 183 (1124)
.-|.++++.++|+| ||.++-+ ||+|-. ---=.|+---=.+|-.-=---| |-||=||++-+
T Consensus 216 glPtkhl~d~vCaV--Cg~~~~~s~~eegvienty~LsCnHvFHEfCIrGWcivGKkqtCPYCKekVd 281 (328)
T KOG1734|consen 216 GLPTKHLSDSVCAV--CGQQIDVSVDEEGVIENTYKLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVD 281 (328)
T ss_pred CCCCCCCCcchhHh--hcchheeecchhhhhhhheeeecccchHHHhhhhheeecCCCCCchHHHHhh
Confidence 34667889999999 7777444 455532 0000233333333432111245 99999998764
No 105
>COG3813 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.11 E-value=34 Score=31.86 Aligned_cols=44 Identities=39% Similarity=0.917 Sum_probs=30.5
Q ss_pred ccccccCCCcccccCCCCccccc--ccCCccchhhhhhhhhcCCCCCCCCCCCc
Q 042084 132 SCGMPACDGKAMKDERGNDIIPC--ECRFKICRDCYMDAQKDTGLCPGCKEPYK 183 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~C--eC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~ 183 (1124)
-|.- ||-++--+ ..+-.-| ||-| |.+|-|. +-++.||.|+...-
T Consensus 7 nCEC--CDrDLpp~--s~dA~ICtfEcTF--CadCae~--~l~g~CPnCGGelv 52 (84)
T COG3813 7 NCEC--CDRDLPPD--STDARICTFECTF--CADCAEN--RLHGLCPNCGGELV 52 (84)
T ss_pred CCcc--cCCCCCCC--CCceeEEEEeeeh--hHhHHHH--hhcCcCCCCCchhh
Confidence 4666 87775444 3344567 9987 9999854 34599999986554
No 106
>COG0601 DppB ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=32.05 E-value=8.9e+02 Score=28.41 Aligned_cols=102 Identities=13% Similarity=0.248 Sum_probs=53.1
Q ss_pred ccceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHH--HHhccCCCchhHHHHHHHHHHHHHHHH
Q 042084 995 EISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLR--TIYATNPSWSKFIGGAFFSFWVLAHLY 1072 (1124)
Q Consensus 995 k~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r--~i~~~~~~w~~l~g~l~~~fWvl~nL~ 1072 (1124)
+..|..|.|+.+-.+. +---++.++ ..++|.++++.+.+..++.|..- .+++ ++ .+|.++... +..+=+
T Consensus 211 ~~dyV~~AraKGl~~~-~i~~~H~lr--NaliP~it~~~~~~~~ll~GavivE~iF~-~P----GiG~l~~~A-i~~~D~ 281 (317)
T COG0601 211 NQDYVRTARAKGLSER-RILFKHALR--NALLPVITVLGLQLGGLLGGAVVVETVFS-WP----GLGRLLVDA-ILNRDY 281 (317)
T ss_pred HhHHHHHHHHCCCCcc-eehHHhhhH--hhHHHHHHHHHHHHHHHHhCHhHhhhhcC-CC----ChHHHHHHH-HHccCH
Confidence 3668778777654211 111112222 34788888888888877776432 1221 22 234443332 223447
Q ss_pred HHHHHHhccCCCccchHHHHHHHHHHHHHHhhheecCCCC
Q 042084 1073 PFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMAISPPGS 1112 (1124)
Q Consensus 1073 Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv~i~~~~~ 1112 (1124)
|++.|.+. +..+-.++.-.+.=+++..+||-..
T Consensus 282 pli~g~~~-------i~~~~~i~~nli~Dily~~lDPRir 314 (317)
T COG0601 282 PVVQGIVL-------VIALLVILGNLLVDILYALLDPRIR 314 (317)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCccC
Confidence 87777644 2222223333344458888998653
No 107
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=30.40 E-value=32 Score=28.83 Aligned_cols=44 Identities=25% Similarity=0.707 Sum_probs=30.8
Q ss_pred ccccccCCCcccccCCCCcccccccCCc-cchhhhhhhhhcCCCCCCCCCCCc
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFK-ICRDCYMDAQKDTGLCPGCKEPYK 183 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~-iCr~Cy~~~~~~g~~Cp~Ck~~y~ 183 (1124)
.|.| |.+.. ...+.-.|+=. .|..|.+.-.+....||-|+.+++
T Consensus 4 ~C~i--C~~~~------~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~ 48 (50)
T PF13920_consen 4 ECPI--CFENP------RDVVLLPCGHLCFCEECAERLLKRKKKCPICRQPIE 48 (50)
T ss_dssp B-TT--TSSSB------SSEEEETTCEEEEEHHHHHHHHHTTSBBTTTTBB-S
T ss_pred CCcc--CCccC------CceEEeCCCChHHHHHHhHHhcccCCCCCcCChhhc
Confidence 6888 86542 11222267888 999999888886699999999875
No 108
>PF14471 DUF4428: Domain of unknown function (DUF4428)
Probab=30.01 E-value=29 Score=30.10 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=19.3
Q ss_pred ccccccCCCcccccCCCCcccccccCCccchhhhhhh
Q 042084 132 SCGMPACDGKAMKDERGNDIIPCECRFKICRDCYMDA 168 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~CeC~f~iCr~Cy~~~ 168 (1124)
.|.| ||.++|+..+ +.=+=+| ||.+|+.-.
T Consensus 1 ~C~i--Cg~kigl~~~----~k~~DG~-iC~~C~~Kl 30 (51)
T PF14471_consen 1 KCAI--CGKKIGLFKR----FKIKDGY-ICKDCLKKL 30 (51)
T ss_pred CCCc--cccccccccc----eeccCcc-chHHHHHHh
Confidence 5999 9999988642 1122233 888888543
No 109
>COG4817 DNA-binding ferritin-like protein (Dps family) [General function prediction only]
Probab=29.26 E-value=43 Score=33.31 Aligned_cols=30 Identities=37% Similarity=0.598 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhhcCcccccccccccchHHHHHH
Q 042084 471 RKIKREYDEFKVRINGLPDSIRRRSDAFNAREEMKM 506 (1124)
Q Consensus 471 ~~~KreYee~k~rI~~l~~~~~~~~~~~n~~ee~~~ 506 (1124)
+.+||||.+|+.|++.|++ |+|.+.+|++.
T Consensus 9 l~eKre~k~~e~RakkLPk------dY~~aykeIqk 38 (111)
T COG4817 9 LEEKREWKEFENRAKKLPK------DYYTAYKEIQK 38 (111)
T ss_pred chHHHHHHHHHHHHHHCcH------HHHHHHHHHHH
Confidence 4679999999999999974 78888888764
No 110
>PF03966 Trm112p: Trm112p-like protein; InterPro: IPR005651 This family of short proteins have no known function. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C terminus contains the strongest conservation. The function of this family is uncertain. The bacterial members are about 60-70 amino acids in length and the eukaryotic examples are about 120 amino acids in length. The C terminus contains the strongest conservation. The entry contains 2 families: Trm112, which is required for tRNA methylation in Saccharomyces cerevisiae (Baker's yeast) and is found in complexes with 2 tRNA methylases (TRM9 and TRM11) also with putative methyltransferase YDR140W []. The zinc-finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast []. The crystal structure of Ynr046w has been determined to 1.7 A resolution. It comprises a zinc-binding domain built from both the N- and C-terminal sequences and an inserted domain, absent from bacterial and archaeal orthologs of the protein, composed of three alpha-helices []. UPF0434, which are proteins that are functionally uncharacterised. ; PDB: 3Q87_A 2KPI_A 2K5R_A 2HF1_A 2JS4_A 2J6A_A 2JR6_A 2PK7_A 2JNY_A.
Probab=29.13 E-value=14 Score=33.38 Aligned_cols=23 Identities=17% Similarity=0.382 Sum_probs=19.9
Q ss_pred hhhhhhhhhcC-CCCCCCCCCCcC
Q 042084 162 RDCYMDAQKDT-GLCPGCKEPYKL 184 (1124)
Q Consensus 162 r~Cy~~~~~~g-~~Cp~Ck~~y~r 184 (1124)
+-|++++..+| =+||.|+..|-.
T Consensus 42 ~~l~~~~i~eg~L~Cp~c~r~YPI 65 (68)
T PF03966_consen 42 HVLLEVEIVEGELICPECGREYPI 65 (68)
T ss_dssp EHHCTEETTTTEEEETTTTEEEEE
T ss_pred hhhhcccccCCEEEcCCCCCEEeC
Confidence 56888899999 999999998854
No 111
>PRK12438 hypothetical protein; Provisional
Probab=28.27 E-value=7.7e+02 Score=33.47 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhhe-ecCCCCCCC
Q 042084 1061 AFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWMA-ISPPGSTPA 1115 (1124)
Q Consensus 1061 l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv~-i~~~~~~~~ 1115 (1124)
.+..+-.+++..-|+-+++.|+-|+|.+.+..-++.++++..+|=. +..|...|+
T Consensus 261 ~iL~~ia~i~Av~f~~~i~~r~~rlp~i~~~llv~~~iv~g~i~P~~vQ~f~V~PN 316 (991)
T PRK12438 261 LILVAIAVLCAVAFFAAIFLRDLRIPAMAAALLVLSAILVGGLWPLLMEQFSVRPN 316 (991)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHhheeEEECcc
Confidence 3444444445555566777777789998887777777777766633 333433333
No 112
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=27.30 E-value=1.3e+02 Score=28.75 Aligned_cols=33 Identities=27% Similarity=0.253 Sum_probs=26.7
Q ss_pred CchhHHHHHHHhccccCCCCEEEeecCCCccCchHHHH
Q 042084 604 KKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAIR 641 (1124)
Q Consensus 604 ~KAGALNallRvSavlsngpfIlnlDcD~y~nnp~~Lr 641 (1124)
+++.|+|.++.. ..+++|+.+|+|.. ..+...+
T Consensus 70 g~~~~~~~~~~~----~~~~~~~~~d~d~~-~~~~~~~ 102 (291)
T COG0463 70 GLGAARNAGLEY----ARGDYIVFLDADDQ-HPPELIP 102 (291)
T ss_pred ChHHHHHhhHHh----ccCCEEEEEccCCC-CCHHHHH
Confidence 599999988775 35699999999999 7655554
No 113
>PF14446 Prok-RING_1: Prokaryotic RING finger family 1
Probab=27.07 E-value=25 Score=31.07 Aligned_cols=24 Identities=33% Similarity=0.807 Sum_probs=16.4
Q ss_pred chhhhhhhh-hcC-CCCCCCCCCCcC
Q 042084 161 CRDCYMDAQ-KDT-GLCPGCKEPYKL 184 (1124)
Q Consensus 161 Cr~Cy~~~~-~~g-~~Cp~Ck~~y~r 184 (1124)
|--|-+.-. +++ -+||.|++||.|
T Consensus 8 C~~Cg~~~~~~dDiVvCp~CgapyHR 33 (54)
T PF14446_consen 8 CPVCGKKFKDGDDIVVCPECGAPYHR 33 (54)
T ss_pred ChhhCCcccCCCCEEECCCCCCcccH
Confidence 444443332 445 899999999998
No 114
>PRK07220 DNA topoisomerase I; Validated
Probab=26.03 E-value=38 Score=43.81 Aligned_cols=47 Identities=21% Similarity=0.493 Sum_probs=28.1
Q ss_pred CccccccCCCcccc--cCCCCcccccccCCccchhhhhhhhh-----cCCCCCCCCC
Q 042084 131 SSCGMPACDGKAMK--DERGNDIIPCECRFKICRDCYMDAQK-----DTGLCPGCKE 180 (1124)
Q Consensus 131 ~~C~i~~C~~~v~~--~~~G~~f~~CeC~f~iCr~Cy~~~~~-----~g~~Cp~Ck~ 180 (1124)
..|.- ||.++.. ...|..|+.|+ +||-|+..+....+ .+..||.|+.
T Consensus 590 ~~CP~--Cg~~l~~r~~r~g~~f~gCs-~yp~C~~~~~l~~~g~~~~~~~~Cp~Cg~ 643 (740)
T PRK07220 590 GKCPL--CGSDLMVRRSKRGSRFIGCE-GYPECTFSLPLPKSGQIIVTDKVCEAHGL 643 (740)
T ss_pred ccccc--CCCeeeEEecCCCceEEEcC-CCCCCCceeeCCCCCccccCCCCCCCCCC
Confidence 47888 6655432 23466799995 46667655433221 2267888875
No 115
>PRK00068 hypothetical protein; Validated
Probab=25.04 E-value=8.6e+02 Score=32.98 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhh
Q 042084 1063 FSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWM 1105 (1124)
Q Consensus 1063 ~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv 1105 (1124)
.++-.++...-|+-+++.|+-|+|.+..+..++.++++..+|=
T Consensus 263 L~~ia~i~a~~~~~~~~~~~~rlp~i~~~l~v~s~~v~g~i~P 305 (970)
T PRK00068 263 LLVIAVICAIAVFSSIVLRDLRIPAIASVLLILSSIIVGAAWP 305 (970)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444455555656668898888877777777666653
No 116
>PRK06393 rpoE DNA-directed RNA polymerase subunit E''; Validated
Probab=24.75 E-value=40 Score=30.74 Aligned_cols=11 Identities=18% Similarity=0.377 Sum_probs=9.0
Q ss_pred cCCCCCCCCCC
Q 042084 171 DTGLCPGCKEP 181 (1124)
Q Consensus 171 ~g~~Cp~Ck~~ 181 (1124)
++..||-|+..
T Consensus 16 ~~~~Cp~Cgs~ 26 (64)
T PRK06393 16 PEKTCPVHGDE 26 (64)
T ss_pred CCCcCCCCCCC
Confidence 45799999985
No 117
>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length. This family contains a number of conserved cysteine residues and its function is unknown.
Probab=23.88 E-value=94 Score=27.81 Aligned_cols=43 Identities=35% Similarity=0.902 Sum_probs=29.4
Q ss_pred ccccccCCCcccccCCCCccccc--ccCCccchhhhhhhhhcCCCCCCCCCCC
Q 042084 132 SCGMPACDGKAMKDERGNDIIPC--ECRFKICRDCYMDAQKDTGLCPGCKEPY 182 (1124)
Q Consensus 132 ~C~i~~C~~~v~~~~~G~~f~~C--eC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y 182 (1124)
.|.. ||-++--+ ..+=.-| ||-| |.+|-+... .++||.|+...
T Consensus 7 nCE~--C~~dLp~~--s~~A~ICSfECTF--C~~C~e~~l--~~~CPNCgGel 51 (57)
T PF06906_consen 7 NCEC--CDKDLPPD--SPEAYICSFECTF--CADCAETML--NGVCPNCGGEL 51 (57)
T ss_pred Cccc--cCCCCCCC--CCcceEEeEeCcc--cHHHHHHHh--cCcCcCCCCcc
Confidence 5777 77665443 3233446 9988 999986543 48999998654
No 118
>COG1615 Uncharacterized conserved protein [Function unknown]
Probab=23.17 E-value=5.5e+02 Score=33.61 Aligned_cols=46 Identities=22% Similarity=0.233 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHhhh
Q 042084 1060 GAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWM 1105 (1124)
Q Consensus 1060 ~l~~~fWvl~nL~Pf~kgL~gRkgr~P~~v~~~s~l~~~~~~llwv 1105 (1124)
+++.+.-++.+.+-++.+++.|.-|+|.+..+.-.|+++++.-+|=
T Consensus 237 ~~iL~aial~~aia~f~ai~~r~~Rip~~~~vll~l~~ii~g~~~p 282 (885)
T COG1615 237 KLILIAIALLCAIAFFSAIFLRDLRIPAIGLVLLLLSSIIVGSLWP 282 (885)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHhhhHH
Confidence 3444444444445555555555555666666665555555555553
No 119
>COG5183 SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification]
Probab=23.03 E-value=65 Score=41.58 Aligned_cols=52 Identities=27% Similarity=0.537 Sum_probs=38.5
Q ss_pred CccccccCCCcccccCCCCcccccccCCcc---chhhhhhhhh-cC-CCCCCCCCCCcCCC
Q 042084 131 SSCGMPACDGKAMKDERGNDIIPCECRFKI---CRDCYMDAQK-DT-GLCPGCKEPYKLGD 186 (1124)
Q Consensus 131 ~~C~i~~C~~~v~~~~~G~~f~~CeC~f~i---Cr~Cy~~~~~-~g-~~Cp~Ck~~y~r~d 186 (1124)
-+|+||-|+| .++...|-||.|.=.| =|.|...=.. .+ ..|-=|+-+|+=.|
T Consensus 13 ~~CRICr~e~----~~d~pLfhPCKC~GSIkYiH~eCL~eW~~~s~~~kCdiChy~~~Fk~ 69 (1175)
T COG5183 13 RSCRICRTED----IRDDPLFHPCKCSGSIKYIHRECLMEWMECSGTKKCDICHYEYKFKD 69 (1175)
T ss_pred hhceeecCCC----CCCCcCcccccccchhHHHHHHHHHHHHhcCCCcceeeecceeeeee
Confidence 6999977753 3456679999997654 6888754443 44 99999999998644
No 120
>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=21.84 E-value=37 Score=26.60 Aligned_cols=10 Identities=40% Similarity=0.982 Sum_probs=8.0
Q ss_pred CCCCCCCCCC
Q 042084 173 GLCPGCKEPY 182 (1124)
Q Consensus 173 ~~Cp~Ck~~y 182 (1124)
..||.|+.+-
T Consensus 18 ~~CP~Cg~~~ 27 (33)
T cd00350 18 WVCPVCGAPK 27 (33)
T ss_pred CcCcCCCCcH
Confidence 8999998753
No 121
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=21.31 E-value=56 Score=34.10 Aligned_cols=41 Identities=34% Similarity=0.800 Sum_probs=25.7
Q ss_pred CCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhh-hcC-CCCCCCCC
Q 042084 129 KGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQ-KDT-GLCPGCKE 180 (1124)
Q Consensus 129 ~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~-~~g-~~Cp~Ck~ 180 (1124)
.+..|.- || |.-|||| +|+= -|+--.+... ..+ ..||.|++
T Consensus 98 ~~~~C~~--Cg--------g~rfv~C~~C~G-s~k~~~~~~~~~~~~~rC~~Cne 141 (147)
T cd03031 98 GGGVCEG--CG--------GARFVPCSECNG-SCKVFAENATAAGGFLRCPECNE 141 (147)
T ss_pred CCCCCCC--CC--------CcCeEECCCCCC-cceEEeccCcccccEEECCCCCc
Confidence 4556887 86 6679999 8863 2333222221 233 89999986
No 122
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=20.33 E-value=2e+02 Score=34.47 Aligned_cols=27 Identities=11% Similarity=0.036 Sum_probs=21.6
Q ss_pred CCEEEeecCCCccCchHHHHHHHHHHh
Q 042084 622 GPFILNLDCDHYIYNCKAIREGMCFMM 648 (1124)
Q Consensus 622 gpfIlnlDcD~y~nnp~~Lr~amcff~ 648 (1124)
.+++++.|||+=.-+++.+++.+..+.
T Consensus 96 ~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 96 SEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred CCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 489999999985557899888877654
No 123
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=20.32 E-value=3e+02 Score=33.80 Aligned_cols=44 Identities=18% Similarity=0.060 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHH--hccCCCccchHHHHHHHHHHHHHHh
Q 042084 1060 GAFFSFWVLAHLYPFAKGL--MGRRGKTPTIVFVWSGLIAITLSLL 1103 (1124)
Q Consensus 1060 ~l~~~fWvl~nL~Pf~kgL--~gRkgr~P~~v~~~s~l~~~~~~ll 1103 (1124)
.++..++++.+.=|+-++| +.+.-|+|+..++...+++.+.|++
T Consensus 63 lilvtG~~lA~sp~v~r~l~~la~~p~t~~~ai~~v~~vs~~~s~i 108 (438)
T TIGR00366 63 LILVTGYALAYSPIVYKLLKTIASLPKTPKQAVALVTFIGSIACWI 108 (438)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhCCCCCCceeehHHHHHHHHHHH
Confidence 3345566766644444444 3446789998888888888877763
No 124
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=20.25 E-value=1.3e+02 Score=35.07 Aligned_cols=38 Identities=11% Similarity=0.179 Sum_probs=25.4
Q ss_pred CCCCEEEeecCCCccCchHHHHHHHHHHhcc-CCCcEEEE
Q 042084 620 SNGPFILNLDCDHYIYNCKAIREGMCFMMDK-GGEDICYI 658 (1124)
Q Consensus 620 sngpfIlnlDcD~y~nnp~~Lr~amcff~Dp-~g~~vafV 658 (1124)
+..+||+++|.|++|+ +++-+....+.... ...+.+||
T Consensus 126 a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 126 ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 5789999999999994 56555444444321 24567776
No 125
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=20.22 E-value=90 Score=36.04 Aligned_cols=47 Identities=23% Similarity=0.668 Sum_probs=36.2
Q ss_pred CCCccccccCCCcccccCCCCccccc-ccCCccchhhhhhhhhcCCCCCCCCCCCcC
Q 042084 129 KGSSCGMPACDGKAMKDERGNDIIPC-ECRFKICRDCYMDAQKDTGLCPGCKEPYKL 184 (1124)
Q Consensus 129 ~g~~C~i~~C~~~v~~~~~G~~f~~C-eC~f~iCr~Cy~~~~~~g~~Cp~Ck~~y~r 184 (1124)
+...|-+ |-+. +-+ -.| +||---|..|-.---++-.-||.|++..+-
T Consensus 238 a~~kC~L--CLe~-----~~~--pSaTpCGHiFCWsCI~~w~~ek~eCPlCR~~~~p 285 (293)
T KOG0317|consen 238 ATRKCSL--CLEN-----RSN--PSATPCGHIFCWSCILEWCSEKAECPLCREKFQP 285 (293)
T ss_pred CCCceEE--EecC-----CCC--CCcCcCcchHHHHHHHHHHccccCCCcccccCCC
Confidence 4468999 8433 233 567 999999999997777777889999998763
No 126
>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.05 E-value=4.1e+02 Score=30.20 Aligned_cols=75 Identities=20% Similarity=0.305 Sum_probs=41.6
Q ss_pred HHHHHHHhccccceEeCcCCCCCCCcccccceEEeecccchHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHH
Q 042084 985 QGLLKVMAGIEISFTLTTKSAAEDNDDIYADLYVVKWTSLMIPPIVIAMVNIVAMVIAFLRTIYATNPSWSKFIGGAFFS 1064 (1124)
Q Consensus 985 ~aLLk~Lgg~k~sF~VTpK~~~~d~~~~yael~~f~ws~LliP~~tLllLnLvAiv~Gv~r~i~~~~~~w~~l~g~l~~~ 1064 (1124)
-.++++++-+..+|.-|...-+ | -++|.++|..++++=-..|..+.+ ..++++
T Consensus 156 y~L~nlm~~~nv~f~~~aSVlG------Y----------cLLPlvvlS~v~i~~~~~g~vg~i-----------l~~~~v 208 (249)
T KOG3103|consen 156 YFLLNLMSNKNVSFGCVASVLG------Y----------CLLPLVVLSFVNIFVGLQGTVGYI-----------LSALFV 208 (249)
T ss_pred HHHHHHHhhcCcceeeehHHHH------H----------HHHHHHHHHHHHHHHhccchHHHH-----------HHHHHH
Confidence 3456666656777765543211 2 256776655555443233333333 345677
Q ss_pred HHHHHHHHHHHHHHhccCCCcc
Q 042084 1065 FWVLAHLYPFAKGLMGRRGKTP 1086 (1124)
Q Consensus 1065 fWvl~nL~Pf~kgL~gRkgr~P 1086 (1124)
+|..+..--++-+...-+++.+
T Consensus 209 ~W~t~aaS~lfv~al~~~~~rl 230 (249)
T KOG3103|consen 209 LWCTYAASKLFVSALSMENQRL 230 (249)
T ss_pred HHHHHHHHHHHHHHhhccccch
Confidence 8988877666666555455444
Done!