BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042086
(784 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
E+ A++ F K +G GG G VYK +L G ++AVK+ + +F E++ +
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE--ERXQGGELQFQTEVEMI 89
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEE-FNWTVRMNVIRSVA 627
+ HR++++ GFC P LVY Y+ GS+A+ L + +W R + A
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 149
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV-GTFGY 686
L+Y+H C P I+HRD+ + N+LL ++EA V DFG+AK + + V GT G+
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLP 746
IAPE + T K +EK DV+ +GV+ LE+I G D +L +
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 747 TPPQNV-------QDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+V +E+ +++VA LC SP RP M V ++L
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
E+ A++ F K +G GG G VYK +L G ++AVK+ + +F E++ +
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE--ERTQGGELQFQTEVEMI 81
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEE-FNWTVRMNVIRSVA 627
+ HR++++ GFC P LVY Y+ GS+A+ L + +W R + A
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV-GTFGY 686
L+Y+H C P I+HRD+ + N+LL ++EA V DFG+AK + + V G G+
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLP 746
IAPE + T K +EK DV+ +GV+ LE+I G D +L +
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 747 TPPQNV-------QDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+V +E+ +++VA LC SP RP M V ++L
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 23/291 (7%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCE 554
L F+G + +++ ++K IG G G+V++A+ + IL + FH+ E
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA----E 76
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEF 614
V EF+ E+ + LRH +IV F G + P N +V EYL RGSL +L GA E+
Sbjct: 77 RVN--EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674
+ R+++ VA ++Y+H+ PPIVHRD+ S N+L+ Y +V DFG+++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF 193
Query: 675 SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPR-DFXXXXXXXXXXX 733
GT ++APE++ EK DVYSFGV+ E+ P +
Sbjct: 194 LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
Query: 734 XXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
EI P+N+ ++ +I+E C P RP T+ LL
Sbjct: 254 KCKRLEI--------PRNLNPQVAAIIEG---CWTNEPWKRPSFATIMDLL 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 141/291 (48%), Gaps = 23/291 (7%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCE 554
L F+G + +++ ++K IG G G+V++A+ + IL + FH+ E
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA----E 76
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEF 614
V EF+ E+ + LRH +IV F G + P N +V EYL RGSL +L GA E+
Sbjct: 77 RVN--EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674
+ R+++ VA ++Y+H+ PPIVHR++ S N+L+ Y +V DFG+++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193
Query: 675 SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPR-DFXXXXXXXXXXX 733
+ GT ++APE++ EK DVYSFGV+ E+ P +
Sbjct: 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
Query: 734 XXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
EI P+N+ ++ +I+E C P RP T+ LL
Sbjct: 254 KCKRLEI--------PRNLNPQVAAIIEG---CWTNEPWKRPSFATIMDLL 293
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 164/380 (43%), Gaps = 36/380 (9%)
Query: 57 NPAKRVISINLSTVGLKG-------NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLY 109
NP + + L G G N L +L LS N L+G+IP S G+L+ L + L+
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 110 RNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSII 169
N L IP + +K L L L N L+G IP L N +NL + L N L+G IP I
Sbjct: 448 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Query: 170 GNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSIXXXXXXXXXXXXS 229
G L++L L LS+N SG+IP LG+ +L+ L L N G+IP+ +
Sbjct: 508 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA----AMFKQSGKIA 563
Query: 230 TNHLSGVIPLSXXXXXXXXXXXXXXXQLSVGEIPIE-IGKLSSLNYLVLNGNQLYGNLPR 288
N ++G + L I E + +LS+ N + G+
Sbjct: 564 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 623
Query: 289 ALGSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXXXXXXQFRKGFPVELEKLIQLSELD 348
+ + +LD+S N L IP+ E+ + L L+
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPK------------------------EIGSMPYLFILN 659
Query: 349 LSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408
L N + G IP E+ ++ L L+LS N G IP + L+ ID+S N L GPIP
Sbjct: 660 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Query: 409 SRIFQYDPMEALQGNKGLCG 428
F+ P N GLCG
Sbjct: 720 MGQFETFPPAKFLNNPGLCG 739
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 163/363 (44%), Gaps = 7/363 (1%)
Query: 62 VISINLST-VGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPV 120
V S N ST + G+ +L LD+S NKL+G + T L ++ + N IPP+
Sbjct: 204 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 263
Query: 121 IGNLKFLYHLDLSENQLSGSIPPTL-GNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLH 179
LK L +L L+EN+ +G IP L G L L L GN G++P G+ L L
Sbjct: 264 P--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 321
Query: 180 LSSNQLSGSIPI-SLGNLSNLVVLHLFENSLFGSIP-SIXXXXXXXXXXXXSTNHLSG-V 236
LSSN SG +P+ +L + L VL L N G +P S+ S+N+ SG +
Sbjct: 322 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Query: 237 IPLSXXXXXXXXXXXXXXXQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTEL 296
+P G+IP + S L L L+ N L G +P +LGSL++L
Sbjct: 382 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKL 441
Query: 297 EYLDLSTNKLGNSIPETXXXXXXXXXXXXXXXQFRKGFPVELEKLIQLSELDLSLNILEG 356
L L N L IP+ P L L+ + LS N L G
Sbjct: 442 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 501
Query: 357 KIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDP 416
+IP I +E+L L LS+N+FSG IP+ L +D++ N G IP + Q
Sbjct: 502 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 561
Query: 417 MEA 419
+ A
Sbjct: 562 IAA 564
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 147/333 (44%), Gaps = 9/333 (2%)
Query: 79 LSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLS 138
L L +S NK++G + S NL + + N+ S IP +G+ L HLD+S N+LS
Sbjct: 177 LKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 233
Query: 139 GSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISL-GNLS 197
G + + L +L++ N G IP + LKSL YL L+ N+ +G IP L G
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACD 291
Query: 198 NLVVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXXXXXXXXXQL 257
L L L N +G++P S+N+ SG +P+
Sbjct: 292 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 351
Query: 258 SVGEIPIEIGKLS-SLNYLVLNGNQLYGNLPRAL--GSLTELEYLDLSTNKLGNSIPETX 314
GE+P + LS SL L L+ N G + L L+ L L N IP T
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 315 XXXXXXXXXXXXXXQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLS 374
P L L +L +L L LN+LEG+IP E+ +++LE L L
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 375 HNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407
N+ +G IPS L+ I +S N L G IP
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 56 CNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSA 115
CN RV + S N S+ LD+S N L+G IP G++ L I+ L N +S
Sbjct: 610 CNITSRVYGGHTSPT--FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Query: 116 SIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSI 168
SIP +G+L+ L LDLS N+L G IP + L+ L + L N+LSG IP +
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 164/380 (43%), Gaps = 36/380 (9%)
Query: 57 NPAKRVISINLSTVGLKG-------NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLY 109
NP + + L G G N L +L LS N L+G+IP S G+L+ L + L+
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 110 RNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSII 169
N L IP + +K L L L N L+G IP L N +NL + L N L+G IP I
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Query: 170 GNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSIXXXXXXXXXXXXS 229
G L++L L LS+N SG+IP LG+ +L+ L L N G+IP+ +
Sbjct: 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA----AMFKQSGKIA 566
Query: 230 TNHLSGVIPLSXXXXXXXXXXXXXXXQLSVGEIPIE-IGKLSSLNYLVLNGNQLYGNLPR 288
N ++G + L I E + +LS+ N + G+
Sbjct: 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626
Query: 289 ALGSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXXXXXXQFRKGFPVELEKLIQLSELD 348
+ + +LD+S N L IP+ E+ + L L+
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPK------------------------EIGSMPYLFILN 662
Query: 349 LSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408
L N + G IP E+ ++ L L+LS N G IP + L+ ID+S N L GPIP
Sbjct: 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Query: 409 SRIFQYDPMEALQGNKGLCG 428
F+ P N GLCG
Sbjct: 723 MGQFETFPPAKFLNNPGLCG 742
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 163/363 (44%), Gaps = 7/363 (1%)
Query: 62 VISINLST-VGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPV 120
V S N ST + G+ +L LD+S NKL+G + T L ++ + N IPP+
Sbjct: 207 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266
Query: 121 IGNLKFLYHLDLSENQLSGSIPPTL-GNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLH 179
LK L +L L+EN+ +G IP L G L L L GN G++P G+ L L
Sbjct: 267 P--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 324
Query: 180 LSSNQLSGSIPI-SLGNLSNLVVLHLFENSLFGSIP-SIXXXXXXXXXXXXSTNHLSG-V 236
LSSN SG +P+ +L + L VL L N G +P S+ S+N+ SG +
Sbjct: 325 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Query: 237 IPLSXXXXXXXXXXXXXXXQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTEL 296
+P G+IP + S L L L+ N L G +P +LGSL++L
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKL 444
Query: 297 EYLDLSTNKLGNSIPETXXXXXXXXXXXXXXXQFRKGFPVELEKLIQLSELDLSLNILEG 356
L L N L IP+ P L L+ + LS N L G
Sbjct: 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504
Query: 357 KIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDP 416
+IP I +E+L L LS+N+FSG IP+ L +D++ N G IP + Q
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
Query: 417 MEA 419
+ A
Sbjct: 565 IAA 567
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 147/333 (44%), Gaps = 9/333 (2%)
Query: 79 LSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLS 138
L L +S NK++G + S NL + + N+ S IP +G+ L HLD+S N+LS
Sbjct: 180 LKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 236
Query: 139 GSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISL-GNLS 197
G + + L +L++ N G IP + LKSL YL L+ N+ +G IP L G
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACD 294
Query: 198 NLVVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXXXXXXXXXQL 257
L L L N +G++P S+N+ SG +P+
Sbjct: 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354
Query: 258 SVGEIPIEIGKLS-SLNYLVLNGNQLYGNLPRAL--GSLTELEYLDLSTNKLGNSIPETX 314
GE+P + LS SL L L+ N G + L L+ L L N IP T
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 315 XXXXXXXXXXXXXXQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLS 374
P L L +L +L L LN+LEG+IP E+ +++LE L L
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 375 HNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407
N+ +G IPS L+ I +S N L G IP
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 56 CNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSA 115
CN RV + S N S+ LD+S N L+G IP G++ L I+ L N +S
Sbjct: 613 CNITSRVYGGHTSPT--FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 116 SIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSI 168
SIP +G+L+ L LDLS N+L G IP + L+ L + L N+LSG IP +
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
++ ATN FD K+ IG G G VYK L G +A+K+ P EF EI+TL
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETL 89
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVA 627
+ RH +V GFC L+Y+Y+E G+L L +D +W R+ + A
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF-LKPDSSNCTELV-GTFG 685
L Y+H I+HRD+ S N+LL ++ +++DFGI+K + D ++ +V GT G
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV------IKGDHPRDFXXXXXXXXXXXXXXXXE 739
YI PE ++TEK DVYSFGV+ EV I PR+ E
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 740 -ILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTV 780
I+DP L + + L + A CL S E RP M V
Sbjct: 267 QIVDPNLADKIR--PESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 25/294 (8%)
Query: 507 YEEIVRATNGFDVK------YCIGIGGQGSVYKAKLTSGEILAVKKFHSLWP--CEMVPQ 558
+ E+ TN FD + +G GG G VYK + + + AVKK ++ E + Q
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQ 75
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+F EIK + + +H ++V+ GF S + LVY Y+ GSL LS +W +
Sbjct: 76 -QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
R + + AN ++++H + +HRDI S N+LL + A++SDFG+A+ + +
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 678 -TELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG----DHPRD--FXXXXXXXX 730
+ +VGT Y+APE + ++T K D+YSFGV+ LE+I G D R+
Sbjct: 192 XSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 731 XXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ +D ++ + + S VA CL+E RP + V QLL
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLL 301
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 132/284 (46%), Gaps = 22/284 (7%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
++ ATN FD K+ IG G G VYK L G +A+K+ P EF EI+TL
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETL 89
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVA 627
+ RH +V GFC L+Y+Y+E G+L L +D +W R+ + A
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV----GT 683
L Y+H I+HRD+ S N+LL ++ +++DFGI+K K T L GT
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGT 204
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEV------IKGDHPRDFXXXXXXXXXXXXXXX 737
GYI PE ++TEK DVYSFGV+ EV I PR+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 738 XE-ILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTV 780
E I+DP L + + L + A CL S E RP M V
Sbjct: 265 LEQIVDPNLADKIR--PESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 143/294 (48%), Gaps = 25/294 (8%)
Query: 507 YEEIVRATNGFDVKYC------IGIGGQGSVYKAKLTSGEILAVKKFHSLWP--CEMVPQ 558
+ E+ TN FD + +G GG G VYK + + + AVKK ++ E + Q
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQ 75
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+F EIK + + +H ++V+ GF S + LVY Y+ GSL LS +W +
Sbjct: 76 -QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
R + + AN ++++H + +HRDI S N+LL + A++SDFG+A+ + +
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 678 -TELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG----DHPRD--FXXXXXXXX 730
+VGT Y+APE + ++T K D+YSFGV+ LE+I G D R+
Sbjct: 192 XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 731 XXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ +D ++ + + S VA CL+E RP + V QLL
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 143/294 (48%), Gaps = 25/294 (8%)
Query: 507 YEEIVRATNGFDVKYC------IGIGGQGSVYKAKLTSGEILAVKKFHSLWP--CEMVPQ 558
+ E+ TN FD + +G GG G VYK + + + AVKK ++ E + Q
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQ 69
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+F EIK + + +H ++V+ GF S + LVY Y+ GSL LS +W +
Sbjct: 70 -QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
R + + AN ++++H + +HRDI S N+LL + A++SDFG+A+ + +
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 678 -TELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG----DHPRD--FXXXXXXXX 730
+VGT Y+APE + ++T K D+YSFGV+ LE+I G D R+
Sbjct: 186 XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 244
Query: 731 XXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ +D ++ + + S VA CL+E RP + V QLL
Sbjct: 245 EDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 137/294 (46%), Gaps = 25/294 (8%)
Query: 507 YEEIVRATNGFDVK------YCIGIGGQGSVYKAKLTSGEILAVKKFHSLWP--CEMVPQ 558
+ E+ TN FD + G GG G VYK + + + AVKK ++ E + Q
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQ 66
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+F EIK + +H ++V+ GF S + LVY Y GSL LS +W
Sbjct: 67 -QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
R + + AN ++++H + +HRDI S N+LL + A++SDFG+A+ + +
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 678 -TELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG----DHPRD--FXXXXXXXX 730
+ +VGT Y APE + ++T K D+YSFGV+ LE+I G D R+
Sbjct: 183 XSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 731 XXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ +D + + S VA CL+E RP + V QLL
Sbjct: 242 EDEEKTIEDYIDKKXNDADSTSVEAXYS---VASQCLHEKKNKRPDIKKVQQLL 292
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 111/203 (54%), Gaps = 21/203 (10%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFV-NEIKTLTELRHRSIVKFY 580
IG G G+VY A + +G+ +A+++ + + P+ E + NEI + E ++ +IV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 581 GFCSHPRNSFLVYEYLERGSLATILS----NDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++V EYL GSL +++ ++G I V R AL ++H +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQALEFLHSN 135
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK 696
++HRDI S N+LL +D +++DFG + P+ S +E+VGT ++APE+V
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
K D++S G++A+E+I+G+ P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFV-NEIKTLTELRHRSIVKFY 580
IG G G+VY A + +G+ +A+++ + + P+ E + NEI + E ++ +IV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 581 GFCSHPRNSFLVYEYLERGSLATILS----NDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++V EYL GSL +++ ++G I V R AL ++H +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQALEFLHSN 135
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK 696
++HRDI S N+LL +D +++DFG + P+ S + +VGT ++APE+V
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
K D++S G++A+E+I+G+ P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFV-NEIKTLTELRHRSIVKFY 580
IG G G+VY A + +G+ +A+++ + + P+ E + NEI + E ++ +IV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 581 GFCSHPRNSFLVYEYLERGSLATILS----NDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++V EYL GSL +++ ++G I V R AL ++H +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQALEFLHSN 135
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK 696
++HRDI S N+LL +D +++DFG + P+ S + +VGT ++APE+V
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
K D++S G++A+E+I+G+ P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFV-NEIKTLTELRHRSIVKFY 580
IG G G+VY A + +G+ +A+++ + + P+ E + NEI + E ++ +IV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 581 GFCSHPRNSFLVYEYLERGSLATILS----NDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++V EYL GSL +++ ++G I V R AL ++H +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQALEFLHSN 136
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK 696
++HRDI S N+LL +D +++DFG + P+ S + +VGT ++APE+V
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
K D++S G++A+E+I+G+ P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 145/323 (44%), Gaps = 56/323 (17%)
Query: 4 KEAYALLKWKTSLQKHNRSLLSSWTFYPVNNATNVSFYSKIKISPCAWFGIQCNPAK--- 60
++ ALL+ K L N + LSSW P + N + W G+ C+
Sbjct: 6 QDKQALLQIKKDL--GNPTTLSSW--LPTTDCCNRT-----------WLGVLCDTDTQTY 50
Query: 61 RVISINLSTVGLK---------GNLKSLSTLDLSK-NKLNGSIPFSFGNLTNLAIMYLYR 110
RV +++LS + L NL L+ L + N L G IP + LT L +Y+
Sbjct: 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH 110
Query: 111 NSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIG 170
++S +IP + +K L LD S N LSG++PP++ +L NL + GN +SG+IP G
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
Query: 171 NLKSLFY-LHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSIXXXXXXXXXXXXS 229
+ LF + +S N+L+G IP + NL NL + L N L G + +
Sbjct: 171 SFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 230 TNHLSGVIPLSXXXXXXXXXXXXXXXQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRA 289
N L+ +G ++G +LN L L N++YG LP+
Sbjct: 230 KNSLA----------------------FDLG----KVGLSKNLNGLDLRNNRIYGTLPQG 263
Query: 290 LGSLTELEYLDLSTNKLGNSIPE 312
L L L L++S N L IP+
Sbjct: 264 LTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 117/290 (40%), Gaps = 53/290 (18%)
Query: 141 IPPTLGNLSNLAVLHLYG-NSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNL 199
IP +L NL L L++ G N+L G IP I L L YL+++ +SG+IP L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 200 VVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXXXXXXXXXQLSV 259
V L S N LSG +P S ++S
Sbjct: 128 VTLDF------------------------SYNALSGTLPPSISSLPNLVGITFDGNRIS- 162
Query: 260 GEIPIEIGKLSSL-NYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETXXXXX 318
G IP G S L + ++ N+L G +P +L L ++DLS N L
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGD--------- 212
Query: 319 XXXXXXXXXXQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNF 378
G +K I L++ L+ ++ GK+ ++L L+L +N
Sbjct: 213 ---------ASVLFGSDKNTQK-IHLAKNSLAFDL--GKVGLS----KNLNGLDLRNNRI 256
Query: 379 SGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCG 428
G +P + L ++VS+N L G IP Q + A NK LCG
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 134/275 (48%), Gaps = 28/275 (10%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKF---HSLWPCEMVPQ-PEFVNEIKT 567
A N + + IG GG G V+K +L + ++A+K S EM+ + EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
++ L H +IVK YG +P +V E++ G L L + W+V++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLL-CLDYE----ARVSDFGIAKFLKPDSSNCTELVG 682
+ YM + PPIVHRD+ S N+ L LD A+V+DFG++ + + + L+G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLG 188
Query: 683 TFGYIAPELVYTMK--VTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEI 740
F ++APE + + TEK D YSF ++ ++ G+ P F E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFINMIREEG 246
Query: 741 LDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
L PT P++ L +++E LC + P+ RP
Sbjct: 247 LR---PTIPEDCPPRLRNVIE---LCWSGDPKKRP 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFV-NEIKTLTELRHRSIVKFY 580
IG G G+VY A + +G+ +A+++ + + P+ E + NEI + E ++ +IV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 581 GFCSHPRNSFLVYEYLERGSLATILS----NDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++V EYL GSL +++ ++G I V R AL ++H +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQALEFLHSN 136
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK 696
++HR+I S N+LL +D +++DFG + P+ S + +VGT ++APE+V
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
K D++S G++A+E+I+G+ P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 28/275 (10%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKF---HSLWPCEMVPQ-PEFVNEIKT 567
A N + + IG GG G V+K +L + ++A+K S EM+ + EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
++ L H +IVK YG +P +V E++ G L L + W+V++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLL-CLDYE----ARVSDFGIAKFLKPDSSNCTELVG 682
+ YM + PPIVHRD+ S N+ L LD A+V+DFG + + + + L+G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLG 188
Query: 683 TFGYIAPELVYTMK--VTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEI 740
F ++APE + + TEK D YSF ++ ++ G+ P F E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFINMIREEG 246
Query: 741 LDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
L PT P++ L +++E LC + P+ RP
Sbjct: 247 LR---PTIPEDCPPRLRNVIE---LCWSGDPKKRP 275
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQ--PEFVNEIKTLTELRHRSIVKFY 580
IGIGG G VY+A E+ H P E + Q E K L+H +I+
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHD--PDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEF--NWTVRMNVIRSVANALSYMHHDCF 638
G C N LV E+ G L +LS + NW V+ +A ++Y+H +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAI 126
Query: 639 PPIVHRDISSKNVLLCLDYE--------ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
PI+HRD+ S N+L+ E +++DFG+A+ + + G + ++APE
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPE 184
Query: 691 LVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
++ ++ DV+S+GVL E++ G+ P
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS TEL GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 28/275 (10%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKF---HSLWPCEMVPQ-PEFVNEIKT 567
A N + + IG GG G V+K +L + ++A+K S EM+ + EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
++ L H +IVK YG +P +V E++ G L L + W+V++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLL-CLDYE----ARVSDFGIAKFLKPDSSNCTELVG 682
+ YM + PPIVHRD+ S N+ L LD A+V+DF ++ + + + L+G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLG 188
Query: 683 TFGYIAPELVYTMK--VTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEI 740
F ++APE + + TEK D YSF ++ ++ G+ P F E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDEYSYGKIKFINMIREEG 246
Query: 741 LDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
L PT P++ L +++E LC + P+ RP
Sbjct: 247 LR---PTIPEDCPPRLRNVIE---LCWSGDPKKRP 275
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY RG + L + +F+ I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALS 127
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T+L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T+L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T+L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T+L GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
FD+ +G G G+VY A+ + ILA+K + + + E++ + LRH +
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
I++ YG+ +L+ EY L T+ + F+ I +ANALSY H
Sbjct: 74 ILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM 695
++HRDI +N+LL + E +++DFG + + SS T L GT Y+ PE++
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 696 KVTEKCDVYSFGVLALEVIKGDHP 719
EK D++S GVL E + G P
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 122 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
FDV +G G GSVYKA +G+I+A+K+ P E Q E + EI + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQ-EIIKEISIMQQCDSPH 85
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATI--LSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK+YG + ++V EY GS++ I L N E+ T+ ++S L Y+
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATI----LQSTLKGLEYL 141
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H F +HRDI + N+LL + A+++DFG+A L + ++GT ++APE++
Sbjct: 142 H---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ D++S G+ A+E+ +G P
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY RG + L + +F+ I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALS 127
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS +L GT Y+ PE+
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS +L GT Y+ PE+
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS T L GT Y+ PE
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + SS T L GT Y+ PE+
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
FD+ +G G G+VY A+ + ILA+K + + + E++ + LRH +
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
I++ YG+ +L+ EY L T+ + F+ I +ANALSY H
Sbjct: 74 ILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM 695
++HRDI +N+LL + E +++DFG + + SS L GT Y+ PE++
Sbjct: 131 K---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 696 KVTEKCDVYSFGVLALEVIKGDHP 719
EK D++S GVL E + G P
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E ++++FG + + SS T L GT Y+ PE+
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E ++++FG + + SS T L GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTS-GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
++V Y IG G G K + S G+IL K+ E Q V+E+ L EL+H +
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPN 66
Query: 576 IVKFYGFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEF-NWTVRMNVIRSVANALSY 632
IV++Y N+ ++V EY E G LA++++ ++ + + V+ + AL
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 633 MHH--DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
H D ++HRD+ NV L ++ DFG+A+ L D E VGT Y++PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE 186
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ M EK D++S G L E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
A F++ +G G G+VY A+ + ILA+K + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
RH +I++ YG+ +L+ EY L T+ + +F+ I +ANALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y H ++HRDI +N+LL E +++DFG + + SS L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ EK D++S GVL E + G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 25/233 (10%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN 615
+ + EF E +T+ +L H +VKFYG CS ++V EY+ G L L + G E +
Sbjct: 45 MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS 104
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS 675
+ M V ++++ F +HRD++++N L+ D +VSDFG+ +++ D
Sbjct: 105 QLLEM--CYDVCEGMAFLESHQF---IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
Query: 676 NCTELVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXX 731
+ VGT + APE+ + K + K DV++FG+L EV G P D
Sbjct: 160 VSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL--YTNSEVV 215
Query: 732 XXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ P L + +I ++ + C +E PE RP T QLL
Sbjct: 216 LKVSQGHRLYRPHLASD---------TIYQIMYSCWHELPEKRP---TFQQLL 256
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTS-GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
++V Y IG G G K + S G+IL K+ E Q V+E+ L EL+H +
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPN 66
Query: 576 IVKFYGFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEF-NWTVRMNVIRSVANALSY 632
IV++Y N+ ++V EY E G LA++++ ++ + + V+ + AL
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 633 MHH--DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
H D ++HRD+ NV L ++ DFG+A+ L D+S VGT Y++PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 186
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ M EK D++S G L E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTS-GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
++V Y IG G G K + S G+IL K+ E Q V+E+ L EL+H +
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPN 66
Query: 576 IVKFYGFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEF-NWTVRMNVIRSVANALSY 632
IV++Y N+ ++V EY E G LA++++ ++ + + V+ + AL
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 633 MHH--DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
H D ++HRD+ NV L ++ DFG+A+ L D+S VGT Y++PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE 186
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ M EK D++S G L E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 505 ILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNE 564
I Y+EI +V+ +G G G V KAK + ++ A+K+ S + F+ E
Sbjct: 6 IDYKEI-------EVEEVVGRGAFGVVCKAKWRAKDV-AIKQIES-----ESERKAFIVE 52
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
++ L+ + H +IVK YG C +P LV EY E GSL +L + + M+
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 110
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGT 683
+ ++Y+H ++HRD+ N+LL ++ DFG A ++ +N G+
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GS 167
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
++APE+ +EKCDV+S+G++ EVI P D
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 505 ILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNE 564
I Y+EI +V+ +G G G V KAK + ++ A+K+ S + F+ E
Sbjct: 5 IDYKEI-------EVEEVVGRGAFGVVCKAKWRAKDV-AIKQIES-----ESERKAFIVE 51
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
++ L+ + H +IVK YG C +P LV EY E GSL +L + + M+
Sbjct: 52 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 109
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGT 683
+ ++Y+H ++HRD+ N+LL ++ DFG A ++ +N G+
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GS 166
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
++APE+ +EKCDV+S+G++ EVI P D
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G G K +GE++ +K+ + Q F+ E+K + L H +++KF G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ + EY++ G+L I+ + + ++ W+ R++ + +A+ ++Y+H I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHS---MNI 129
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFL--------------KPDSSNCTELVGTFGYI 687
+HRD++S N L+ + V+DFG+A+ + KPD +VG ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 688 APELVYTMKVTEKCDVYSFGVLALEVI 714
APE++ EK DV+SFG++ E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 32/278 (11%)
Query: 519 VKYCIGIGGQGSVYKAKLTS----GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR 574
++ IG G G V + +L + +A+K + + EF++E + + H
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHP 77
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILS-NDGAIEEFNWTVRMNVIRSVANALSYM 633
+I++ G ++ ++ E++E G+L + L NDG +F + ++R +A+ + Y+
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYL 134
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIA 688
+ VHRD++++N+L+ + +VSDFG+++FL+ +SS+ TE G + A
Sbjct: 135 AEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 689 PELVYTMKVTEKCDVYSFGVLALEVIK-GDHPR-DFXXXXXXXXXXXXXXXXEILDPRLP 746
PE + K T D +S+G++ EV+ G+ P D D RLP
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ--------DYRLP 243
Query: 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
PP D S+ ++ C + +RP V L
Sbjct: 244 PPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +G+ +AVKK ++ Q NE+ + + H ++V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE TV ++V+R ALSY+H+
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR----ALSYLHNQG- 161
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APE++ +
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E+I G+ P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKK-FHSLWPCEMVPQPEFVNEIKTLTELR 572
+ FD+ +G G G+VY A+ + I+A+K F S E V + + EI+ + LR
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLR 73
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H +I++ Y + + +L+ E+ RG L L G +E M +A+AL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHY 130
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
H ++HRDI +N+L+ E +++DFG + + S + GT Y+ PE++
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
EK D++ GVL E + G P D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 39/278 (14%)
Query: 522 CIGIGGQGSVYKA--KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
IG G G VYK K +SG+ +A+K + + + + +F+ E + + H +I
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ--RVDFLGEAGIMGQFSHHNI 108
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
++ G S + ++ EY+E G+L L DG EF+ + ++R +A + Y+ +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLAN 165
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG---TFGYIAPELV 692
+ VHRD++++N+L+ + +VSDFG+++ L+ D G + APE +
Sbjct: 166 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 693 YTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDP-----RLP 746
K T DV+SFG++ EV+ G+ P E++ RLP
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP------------YWELSNHEVMKAINDGFRLP 270
Query: 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
TP D +I ++ C + RP + +L
Sbjct: 271 TP----MDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKK-FHSLWPCEMVPQPEFVNEIKTLTELR 572
+ FD+ +G G G+VY A+ + I+A+K F S E V + + EI+ + LR
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLR 72
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H +I++ Y + + +L+ E+ RG L L G +E M +A+AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHY 129
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
H ++HRDI +N+L+ E +++DFG + + S + GT Y+ PE++
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
EK D++ GVL E + G P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +SG+++AVKK ++ Q NE+ + + +H ++V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE V + V++ ALS +H
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----ALSVLHAQG- 147
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APEL+ +
Sbjct: 148 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E++ G+ P
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +SG+++AVKK ++ Q NE+ + + +H ++V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE V + V++ ALS +H
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----ALSVLHAQG- 136
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APEL+ +
Sbjct: 137 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E++ G+ P
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPP 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +SG+++AVKK ++ Q NE+ + + +H ++V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE V + V++ ALS +H
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----ALSVLHAQG- 190
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APEL+ +
Sbjct: 191 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E++ G+ P
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPP 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +SG+++AVKK ++ Q NE+ + + +H ++V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE V + V++ ALS +H
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----ALSVLHAQG- 145
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APEL+ +
Sbjct: 146 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E++ G+ P
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPP 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +SG+++AVKK ++ Q NE+ + + +H ++V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE V + V++ ALS +H
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----ALSVLHAQG- 140
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APEL+ +
Sbjct: 141 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E++ G+ P
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPP 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 519 VKYCIGIGGQGSVYKAKLTS----GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR 574
++ IG G G V + +L + +A+K + + EF++E + + H
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHP 75
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILS-NDGAIEEFNWTVRMNVIRSVANALSYM 633
+I++ G ++ ++ E++E G+L + L NDG +F + ++R +A+ + Y+
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYL 132
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIA 688
+ VHRD++++N+L+ + +VSDFG+++FL+ +SS+ T G + A
Sbjct: 133 AEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 689 PELVYTMKVTEKCDVYSFGVLALEVIK-GDHP-RDFXXXXXXXXXXXXXXXXEILDPRLP 746
PE + K T D +S+G++ EV+ G+ P D D RLP
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ--------DYRLP 241
Query: 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
PP D S+ ++ C + +RP V L
Sbjct: 242 PPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLTSGE-ILAVKK-FHSLWPCEMVPQPEFVNEIKTLTELR 572
+ FD+ +G G G+VY A+ + I+A+K F S E V + + EI+ + LR
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLR 72
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H +I++ Y + + +L+ E+ RG L L G +E M +A+AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELADALHY 129
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
H ++HRDI +N+L+ E +++DFG + + S + GT Y+ PE++
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
EK D++ GVL E + G P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRHRSIVK 578
IG G G V A + +SG+++AVKK ++ Q NE+ + + +H ++V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y ++V E+LE G+L I+++ EE V + V+ ALS +H
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL----QALSVLHAQG- 267
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
++HRDI S ++LL D ++SDFG + + LVGT ++APEL+ +
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G++ +E++ G+ P
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPP 346
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ + + +A+K + + +F+ E + + +L H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C LV+E++E G L+ L + F + + V ++Y+ C ++
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ + +VSDFG+ +F+ D T GT + +PE+ + +
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 700 KCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELIS 758
K DV+SFGVL EV +G P + + PRL +
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLAS---------TH 235
Query: 759 IVEVAFLCLNESPESRP 775
+ ++ C E PE RP
Sbjct: 236 VYQIMNHCWRERPEDRP 252
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ + + +A+K + + +F+ E + + +L H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C LV+E++E G L+ L + F + + V ++Y+ C ++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ + +VSDFG+ +F+ D T GT + +PE+ + +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 700 KCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELIS 758
K DV+SFGVL EV +G P + + PRL +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLAS---------TH 232
Query: 759 IVEVAFLCLNESPESRP 775
+ ++ C E PE RP
Sbjct: 233 VYQIMNHCWKERPEDRP 249
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ + + +A+K + + +F+ E + + +L H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C LV+E++E G L+ L + F + + V ++Y+ C ++
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ + +VSDFG+ +F+ D T GT + +PE+ + +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 700 KCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELIS 758
K DV+SFGVL EV +G P + + PRL +
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLAS---------TH 230
Query: 759 IVEVAFLCLNESPESRP 775
+ ++ C E PE RP
Sbjct: 231 VYQIMNHCWKERPEDRP 247
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G VYKA+ GE A+KK E +P + EI L EL+H +IVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ LV+E+L++ + +G +E + + + N ++Y H ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLES---VTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTMKVTEKC 701
HRD+ +N+L+ + E +++DFG+A+ T V T Y AP+ L+ + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 702 DVYSFGVLALEVIKG 716
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G VYKA+ GE A+KK E +P + EI L EL+H +IVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ LV+E+L++ + +G +E + + + N ++Y H ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLES---VTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTMKVTEKC 701
HRD+ +N+L+ + E +++DFG+A+ T V T Y AP+ L+ + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 702 DVYSFGVLALEVIKG 716
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI L++ + K+YG +++ EYL GS +L G +EF +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIAT---M 125
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
++ + L Y+H + +HRDI + NVLL + +++DFG+A L VG
Sbjct: 126 LKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG 182
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILD 742
T ++APE++ K D++S G+ A+E+ KG+ P L
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN----------SDMHPMRVLFLI 232
Query: 743 PRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
P+ PP V D S E CLN+ P RP
Sbjct: 233 PK-NNPPTLVGDFTKSFKEFIDACLNKDPSFRP 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +A+K +L P M P+ F+ E + + +L+H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIK---TLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAV 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
S ++V EY+ +GSL L DG +++ VA ++Y+ + +
Sbjct: 73 VSE-EPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERMNY---I 127
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEK 700
HRD+ S N+L+ +++DFG+A+ ++ D+ F + APE + T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 701 CDVYSFGVLALE-VIKGDHPRDFXXXXXXXXXXXXXXXXEILDP-----RLPTPPQNVQD 754
DV+SFG+L E V KG P E+L+ R+P P QD
Sbjct: 187 SDVWSFGILLTELVTKGRVP------------YPGMNNREVLEQVERGYRMPCP----QD 230
Query: 755 ELISIVEVAFLCLNESPESRP 775
IS+ E+ C + PE RP
Sbjct: 231 CPISLHELMIHCWKKDPEERP 251
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ + + +A+K + + +F+ E + + +L H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE----GSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C LV+E++E G L+ L + F + + V ++Y+ C ++
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ + +VSDFG+ +F+ D T GT + +PE+ + +
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 700 KCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELIS 758
K DV+SFGVL EV +G P + + PRL +
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLAS---------TH 252
Query: 759 IVEVAFLCLNESPESRP 775
+ ++ C E PE RP
Sbjct: 253 VYQIMNHCWKERPEDRP 269
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G VYKA+ GE A+KK E +P + EI L EL+H +IVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ LV+E+L++ + +G +E + + + N ++Y H ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLES---VTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTMKVTEKC 701
HRD+ +N+L+ + E +++DFG+A+ T + T Y AP+ L+ + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 702 DVYSFGVLALEVIKG 716
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+++ N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 11 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 64
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M+ +A
Sbjct: 65 KKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA--QIA 121
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGY 686
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ + + +
Sbjct: 122 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW 178
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 226
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 227 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 257
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 11 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 64
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M+ +A
Sbjct: 65 KKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA--QIA 121
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 122 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 177
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 225
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 226 ERGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 257
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 499 LTFEGKI----------LYEEIVRATNGF---------DVKYCIGIGGQGSVYKAKL-TS 538
L F+GK+ YEE RA F ++ IG G G V +L
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 539 GEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEY 595
G+ +A+K + + + +F++E + + H +I++ G + R + +V EY
Sbjct: 74 GQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 596 LERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC 654
+E GSL T L ++DG +F + ++R V + Y+ + VHRD++++NVL+
Sbjct: 132 MENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVD 185
Query: 655 LDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTEKCDVYSFGVLAL 711
+ +VSDFG+++ L+ D G + APE + + DV+SFGV+
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 712 EVIK-GDHP 719
EV+ G+ P
Sbjct: 246 EVLAYGERP 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 3 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 56
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 57 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 113
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 114 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 169
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 217
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 218 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 7 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 60
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+LRH +V+ Y S ++V EY+ +GSL L + + +++ +A+
Sbjct: 61 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 118
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GY 686
++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F +
Sbjct: 119 GMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKW 174
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 222
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 223 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 253
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 77
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 78 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 180 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 233
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+LRH +V+ Y S ++V EY+ +GSL L + + +++ +A+
Sbjct: 234 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 291
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GY 686
++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F +
Sbjct: 292 GMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKW 347
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 395
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 396 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 426
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 180 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 233
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+LRH +V+ Y S ++V EY+ +GSL L + + +++ +A+
Sbjct: 234 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 291
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GY 686
++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F +
Sbjct: 292 GMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKW 347
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 395
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 396 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 426
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 73 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 73 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 88
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ P+ + +V ++ E SL L + +F +++ R A + Y+H I+
Sbjct: 89 STKPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 643 HRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK---V 697
HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 18 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 74
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 75 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 36 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 92
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 93 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 20 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ P+ + +V ++ E SL L + +F +++ R A + Y+H I+
Sbjct: 77 STKPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 643 HRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK---V 697
HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 263 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 316
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+LRH +V+ Y S ++V EY+ +GSL L + + +++ +A+
Sbjct: 317 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 374
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GY 686
++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F +
Sbjct: 375 GMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKW 430
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 478
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 479 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 509
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 43 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 99
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 100 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 5 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 58
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 59 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 115
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 116 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 171
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 219
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 220 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 251
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 26/257 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ + + +A+K + + +F+ E + + +L H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C LV E++E G L+ L + F + + V ++Y+ C ++
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ + +VSDFG+ +F+ D T GT + +PE+ + +
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 700 KCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELIS 758
K DV+SFGVL EV +G P + + PRL +
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLAS---------TH 233
Query: 759 IVEVAFLCLNESPESRP 775
+ ++ C E PE RP
Sbjct: 234 VYQIMNHCWRERPEDRP 250
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 100
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 101 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 100
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 101 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 77
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 78 STKPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 519 VKYCIGIGGQGSVYKAKLT---SGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR 574
++ IG G G V L EI +A+K S + + + +F++E + + H
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHP 94
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYM 633
+++ G + ++ E++E GSL + L NDG +F + ++R +A + Y+
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYL 151
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIA 688
+ VHRD++++N+L+ + +VSDFG+++FL+ D+S+ T G + A
Sbjct: 152 ADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 689 PELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
PE + K T DV+S+G++ EV+ G+ P
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 499 LTFEGKI----------LYEEIVRATNGF---------DVKYCIGIGGQGSVYKAKL-TS 538
L F+GK+ YEE RA F ++ IG G G V +L
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 539 GEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEY 595
G+ +A+K + + + +F++E + + H +I++ G + R + +V EY
Sbjct: 74 GQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 596 LERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC 654
+E GSL T L ++DG +F + ++R V + Y+ + VHRD++++NVL+
Sbjct: 132 MENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVD 185
Query: 655 LDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTEKCDVYSFGVLAL 711
+ +VSDFG+++ L+ D G + APE + + DV+SFGV+
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 712 EVIK-GDHP 719
EV+ G+ P
Sbjct: 246 EVLAYGERP 254
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIE-EFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ P+ + +V ++ E SL L IE +F +++ R A + Y+H I
Sbjct: 73 STAPQLA-IVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK--- 696
+HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 180 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 233
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+LRH +V+ Y S ++V EY+ +GSL L + + +++ +A+
Sbjct: 234 KKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 291
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GY 686
++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F +
Sbjct: 292 GMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKW 347
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 395
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 396 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 426
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
NE+ + + +H ++V+ Y +++ E+L+ G+L I+S EE TV
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATV---- 146
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+V AL+Y+H ++HRDI S ++LL LD ++SDFG + D LVG
Sbjct: 147 CEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVG 203
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE++ + D++S G++ +E++ G+ P
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G+VYK K G++ AVK + P Q F NE+ L + RH +I+ F G+
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 88
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ P+ + +V ++ E SL L + +F +++ R A + Y+H I+
Sbjct: 89 STAPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 643 HRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK---V 697
HRD+ S N+ L D ++ DFG+A K S +L G+ ++APE++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + DVY+FG++ E++ G P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
++RH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 68 KKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 4 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 57
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+LRH +V+ Y S +V EY+ +GSL L + + +++ +A+
Sbjct: 58 KKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 115
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GY 686
++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F +
Sbjct: 116 GMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKW 171
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP-- 743
APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVE 219
Query: 744 ---RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 220 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERP 250
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +G L L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 181 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGNMSPEA-FLQEAQVM 234
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +GSL L + G V M +A
Sbjct: 235 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA--QIA 291
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+ + ++ D+ F
Sbjct: 292 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIK 347
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 395
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 396 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 427
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V K +A+K + + EF+ E K + L H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C+ R F++ EY+ G L L F + + + V A+ Y+ F +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ +VSDFG+++++ D T VG+ + PE++ K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 700 KCDVYSFGVLALEV 713
K D+++FGVL E+
Sbjct: 201 KSDIWAFGVLMWEI 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ + + +A+K + + +F+ E + + +L H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C LV+E++E G L+ L + F + + V ++Y+ ++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEE---ASVI 125
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ + +VSDFG+ +F+ D T GT + +PE+ + +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 700 KCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELIS 758
K DV+SFGVL EV +G P + + PRL +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLAS---------TH 232
Query: 759 IVEVAFLCLNESPESRPPMHTVCQLL 784
+ ++ C E PE RP + + L
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 38/276 (13%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL 568
EI R + +VK +G G G V+ +A+K +L P M P+ F+ E + +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEA-FLQEAQVM 67
Query: 569 TELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVA 627
+LRH +V+ Y S ++V EY+ +G L L + G V M +A
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA--QIA 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--G 685
+ ++Y+ + VHRD+ + N+L+ + +V+DFG+A+ ++ D+ F
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIK 180
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV-IKGDHPRDFXXXXXXXXXXXXXXXXEILDP- 743
+ APE + T K DV+SFG+L E+ KG P E+LD
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQV 228
Query: 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
R+P PP+ + S+ ++ C + PE RP
Sbjct: 229 ERGYRMPCPPECPE----SLHDLMCQCWRKDPEERP 260
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI L++ + K+YG +++ EYL GS +L G ++E T +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDE---TQIATI 129
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+R + L Y+H + +HRDI + NVLL E +++DFG+A L VG
Sbjct: 130 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILD 742
T ++APE++ K D++S G+ A+E+ +G+ P L
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL----------FLI 236
Query: 743 PR--LPTPPQNVQDELISIVEVAFLCLNESPESRP 775
P+ PT N L VE CLN+ P RP
Sbjct: 237 PKNNPPTLEGNYSKPLKEFVEA---CLNKEPSFRP 268
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI L++ + K+YG +++ EYL GS +L G ++E T +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDE---TQIATI 124
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+R + L Y+H + +HRDI + NVLL E +++DFG+A L VG
Sbjct: 125 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 181
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE++ K D++S G+ A+E+ +G+ P
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI L++ + K+YG +++ EYL GS +L G ++E T +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDE---TQIATI 109
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+R + L Y+H + +HRDI + NVLL E +++DFG+A L VG
Sbjct: 110 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 166
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILD 742
T ++APE++ K D++S G+ A+E+ +G+ P L
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL----------FLI 216
Query: 743 PR--LPTPPQNVQDELISIVEVAFLCLNESPESRP 775
P+ PT N L VE CLN+ P RP
Sbjct: 217 PKNNPPTLEGNYSKPLKEFVEA---CLNKEPSFRP 248
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI L++ + K+YG +++ EYL GS +L G ++E T +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDE---TQIATI 109
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+R + L Y+H + +HRDI + NVLL E +++DFG+A L VG
Sbjct: 110 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 166
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILD 742
T ++APE++ K D++S G+ A+E+ +G+ P L
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL----------FLI 216
Query: 743 PR--LPTPPQNVQDELISIVEVAFLCLNESPESRP 775
P+ PT N L VE CLN+ P RP
Sbjct: 217 PKNNPPTLEGNYSKPLKEFVEA---CLNKEPSFRP 248
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V K +A+K + + EF+ E K + L H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C+ R F++ EY+ G L L F + + + V A+ Y+ F +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 142
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ +VSDFG+++++ D T VG+ + PE++ K +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 700 KCDVYSFGVLALEV 713
K D+++FGVL E+
Sbjct: 201 KSDIWAFGVLMWEI 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 34/288 (11%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ ++++ IG G V A E +A+K+ +L C+ E + EI+ +++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQ-TSMDELLKEIQAMSQCHH 67
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEE-----FNWTVRMNVIRSVAN 628
+IV +Y +LV + L GS+ I+ + A E + + ++R V
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC-----TELVGT 683
L Y+H + +HRD+ + N+LL D +++DFG++ FL VGT
Sbjct: 128 GLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 684 FGYIAPELVYTMKVTE-KCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILD 742
++APE++ ++ + K D++SFG+ A+E+ G P D
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 238
Query: 743 PRLPTPPQNVQDELI------SIVEVAFLCLNESPESRPPMHTVCQLL 784
P P+ VQD+ + S ++ LCL + PE RP T +LL
Sbjct: 239 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP---TAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ ++++ IG G V A E +A+K+ +L C+ E + EI+ +++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQ-TSMDELLKEIQAMSQCHH 72
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEE-----FNWTVRMNVIRSVAN 628
+IV +Y +LV + L GS+ I+ + A E + + ++R V
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE------LVG 682
L Y+H + +HRD+ + N+LL D +++DFG++ FL + T VG
Sbjct: 133 GLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFL-ATGGDITRNKVRKTFVG 188
Query: 683 TFGYIAPELVYTMKVTE-KCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEIL 741
T ++APE++ ++ + K D++SFG+ A+E+ G P
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------ 242
Query: 742 DPRLPTPPQNVQDELI------SIVEVAFLCLNESPESRPPMHTVCQLL 784
DP P+ VQD+ + S ++ LCL + PE RP T +LL
Sbjct: 243 DP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP---TAAELL 286
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+A+ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS-NDGAIEEFNWTV 618
+F+ E + + H +I+ G + + +V EY+E GSL T L NDG +F
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG---QFTVIQ 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
+ ++R ++ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 126 LVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 182
Query: 679 ELVG---TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + APE + K T DV+S+G++ EV+ G+ P
Sbjct: 183 TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G VYKAK + G I+A+K+ E +P + EI L EL H +IV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDV 87
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM-NVIRSVANALSYMHHDCFPPI 641
R LV+E++E+ + N +++ + + ++R VA+ + H I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR-----I 140
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTMKVTEK 700
+HRD+ +N+L+ D +++DFG+A+ + T V T Y AP+ L+ + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+I G
Sbjct: 201 VDIWSIGCIFAEMITG 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ F VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G VYKAK + G I+A+K+ E +P + EI L EL H +IV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDV 87
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM-NVIRSVANALSYMHHDCFPPI 641
R LV+E++E+ + N +++ + + ++R VA+ + H I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR-----I 140
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTMKVTEK 700
+HRD+ +N+L+ D +++DFG+A+ + T V T Y AP+ L+ + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+I G
Sbjct: 201 VDIWSIGCIFAEMITG 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V K +A+K + + EF+ E K + L H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C+ R F++ EY+ G L L F + + + V A+ Y+ F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ +VSDFG+++++ D T VG+ + PE++ K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 700 KCDVYSFGVLALEV 713
K D+++FGVL E+
Sbjct: 186 KSDIWAFGVLMWEI 199
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN 615
+ + EF+ E K + L H +V+ YG C+ R F++ EY+ G L L F
Sbjct: 52 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQ 109
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS 675
+ + + V A+ Y+ F +HRD++++N L+ +VSDFG+++++ D
Sbjct: 110 TQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 166
Query: 676 NCTELVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
T VG+ + PE++ K + K D+++FGVL E+
Sbjct: 167 --TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTV 618
+F++E + + H +++ G + ++ E++E GSL + L NDG +F
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG---QFTVIQ 110
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
+ ++R +A + Y+ + VHR ++++N+L+ + +VSDFG+++FL+ D+S+ T
Sbjct: 111 LVGMLRGIAAGMKYLADMNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
Query: 679 ELVGTFG-----YIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + APE + K T DV+S+G++ EV+ G+ P
Sbjct: 168 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V K +A+K + + EF+ E K + L H +V+ YG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C+ R F++ EY+ G L L F + + + V A+ Y+ F +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 126
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ +VSDFG+++++ D T VG+ + PE++ K +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 700 KCDVYSFGVLALEV 713
K D+++FGVL E+
Sbjct: 185 KSDIWAFGVLMWEI 198
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V K +A+K + + EF+ E K + L H +V+ YG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C+ R F++ EY+ G L L F + + + V A+ Y+ F +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 122
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ +VSDFG+++++ D T VG+ + PE++ K +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 700 KCDVYSFGVLALEV 713
K D+++FGVL E+
Sbjct: 181 KSDIWAFGVLMWEI 194
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G G V K + +G I+A+KKF +MV + + EIK L +LRH ++V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA-MREIKLLKQLRHENLVNLLE 91
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEF----NWTVRMNVIRSVANALSYMH-HD 636
C + +LV+E+++ TIL + +E F ++ V + + N + + H H+
Sbjct: 92 VCKKKKRWYLVFEFVDH----TILDD---LELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTM 695
I+HRDI +N+L+ ++ DFG A+ L + V T Y APE LV +
Sbjct: 145 ----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200
Query: 696 KVTEKCDVYSFGVLALEVIKGD 717
K + DV++ G L E+ G+
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 137
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 138 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 120
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 121 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G VYK + E++A+K + + + EI L++ I +++G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+++ EYL GS +L G +EE T ++R + L Y+H +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL-KPGPLEE---TYIATILREILKGLDYLHSER---K 137
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKC 701
+HRDI + NVLL + +++DFG+A L VGT ++APE++ K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 702 DVYSFGVLALEVIKGDHP 719
D++S G+ A+E+ KG+ P
Sbjct: 198 DIWSLGITAIELAKGEPP 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 14/219 (6%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVP 557
L F+G Y++ +K+ +G G G VY+ + +AVK + +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTME 65
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
EF+ E + E++H ++V+ G C+ +++ E++ G+L L + +E N
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV 124
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC 677
V + + +++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+
Sbjct: 125 VLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 179
Query: 678 TELVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
T G + APE + K + K DV++FGVL E+
Sbjct: 180 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+ + L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V EY+E GSL + L A +F
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQL 147
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 148 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 519 VKYCIGIGGQGSVYKAKLT---SGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR 574
++ IG+G G V +L EI +A+K + + + + +F++E + + H
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHP 75
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYM 633
+I+ G + + ++ EY+E GSL L NDG F + ++R + + + Y+
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYL 132
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPE 690
+ VHRD++++N+L+ + +VSDFG+++ L+ D G + APE
Sbjct: 133 SDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 691 LVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
+ K T DV+S+G++ EV+ G+ P
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 519 VKYCIGIGGQGSVYKAKLT---SGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR 574
++ IG+G G V +L EI +A+K + + + + +F++E + + H
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHP 69
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYM 633
+I+ G + + ++ EY+E GSL L NDG F + ++R + + + Y+
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYL 126
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPE 690
+ VHRD++++N+L+ + +VSDFG+++ L+ D G + APE
Sbjct: 127 SDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 691 LVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
+ K T DV+S+G++ EV+ G+ P
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 514 TNGFDVKYCIGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
++ + + +G G G V K K+T G+ AVK + + + E++ L +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANAL 630
H +I+K Y F +LV E G L I+S + F+ +IR V + +
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGI 163
Query: 631 SYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYI 687
+YMH + IVHRD+ +N+LL D R+ DFG++ + S + +GT YI
Sbjct: 164 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYI 219
Query: 688 APELVYTMKVTEKCDVYSFGVL 709
APE+++ EKCDV+S GV+
Sbjct: 220 APEVLHGT-YDEKCDVWSTGVI 240
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 514 TNGFDVKYCIGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
++ + + +G G G V K K+T G+ AVK + + + E++ L +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANAL 630
H +I+K Y F +LV E G L I+S + F+ +IR V + +
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGI 162
Query: 631 SYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYI 687
+YMH + IVHRD+ +N+LL D R+ DFG++ + S + +GT YI
Sbjct: 163 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYI 218
Query: 688 APELVYTMKVTEKCDVYSFGVL 709
APE+++ EKCDV+S GV+
Sbjct: 219 APEVLHGT-YDEKCDVWSTGVI 239
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 16/194 (8%)
Query: 522 CIGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF 579
+G G G V K K+T G+ AVK + + + E++ L +L H +I+K
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 580 YGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y F +LV E G L I+S + F+ +IR V + ++YMH +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN-- 145
Query: 639 PPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM 695
IVHRD+ +N+LL D R+ DFG++ + S + +GT YIAPE+++
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEVLHGT 203
Query: 696 KVTEKCDVYSFGVL 709
EKCDV+S GV+
Sbjct: 204 -YDEKCDVWSTGVI 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V K +A+K + + EF+ E K + L H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
C+ R F++ EY+ G L L F + + + V A+ Y+ F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVTE 699
HRD++++N L+ +VSDFG+++++ D + G+ + PE++ K +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR--GSKFPVRWSPPEVLMYSKFSS 185
Query: 700 KCDVYSFGVLALEV 713
K D+++FGVL E+
Sbjct: 186 KSDIWAFGVLMWEI 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 561 FVNEIKTLTELRHRSIVKFYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR 619
F+ E +T+LRH ++V+ G + ++V EY+ +GSL L + G
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCL 119
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ V A+ Y+ + F VHRD++++NVL+ D A+VSDFG+ K ++ T+
Sbjct: 120 LKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQ 171
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G + APE + K + K DV+SFG+L E+
Sbjct: 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 561 FVNEIKTLTELRHRSIVKFYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR 619
F+ E +T+LRH ++V+ G + ++V EY+ +GSL L + G
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCL 104
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ V A+ Y+ + F VHRD++++NVL+ D A+VSDFG+ K ++ T+
Sbjct: 105 LKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQ 156
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G + APE + K + K DV+SFG+L E+
Sbjct: 157 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTL 568
++ +++ +G GG V+ A+ L +AVK + ++ P F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVK----VLRADLARDPSFYLRFRREAQNA 66
Query: 569 TELRHRSIVKFY--GFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
L H +IV Y G P ++V EY++ +L I+ +G + + VI
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIA 123
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE---LV 681
AL++ H + I+HRD+ N+++ +V DFGIA+ + ++ T+ ++
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y++PE V + DVYS G + EV+ G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTL 568
++ +++ +G GG V+ A+ L +AVK + ++ P F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVK----VLRADLARDPSFYLRFRREAQNA 66
Query: 569 TELRHRSIVKFY--GFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
L H +IV Y G P ++V EY++ +L I+ +G + + VI
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIA 123
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN----CTEL 680
AL++ H + I+HRD+ N+L+ +V DFGIA+ + DS N +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAV 179
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+GT Y++PE V + DVYS G + EV+ G+ P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTL 568
++ +++ +G GG V+ A+ L +AVK + ++ P F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVK----VLRADLARDPSFYLRFRREAQNA 66
Query: 569 TELRHRSIVKFY--GFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
L H +IV Y G P ++V EY++ +L I+ +G + + VI
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIA 123
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE---LV 681
AL++ H + I+HRD+ N+++ +V DFGIA+ + ++ T+ ++
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y++PE V + DVYS G + EV+ G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 18/205 (8%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G G VYKAK +G + A K + E+ +++ EI+ L H IVK G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 582 FCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
H +++ E+ G++ A +L D + E V V R + AL+++H
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSK---R 129
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGI-AKFLKPDSSNCTELVGTFGYIAPELVY--TMKV 697
I+HRD+ + NVL+ L+ + R++DFG+ AK LK + +GT ++APE+V TMK
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPEVVMCETMKD 188
Query: 698 TE---KCDVYSFGVLALEVIKGDHP 719
T K D++S G+ +E+ + + P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGS---VYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFV 562
YE + R + +V +G G G+ VYKAK +G + A K + E+ +++
Sbjct: 8 YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYI 64
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMN 621
EI+ L H IVK G H +++ E+ G++ A +L D + E V
Sbjct: 65 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--- 121
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI-AKFLKPDSSNCTEL 680
V R + AL+++H I+HRD+ + NVL+ L+ + R++DFG+ AK LK +
Sbjct: 122 VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-F 177
Query: 681 VGTFGYIAPELVY--TMKVTE---KCDVYSFGVLALEVIKGDHP 719
+GT ++APE+V TMK T K D++S G+ +E+ + + P
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 561 FVNEIKTLTELRHRSIVKFYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR 619
F+ E +T+LRH ++V+ G + ++V EY+ +GSL L + G
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCL 291
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ V A+ Y+ + F VHRD++++NVL+ D A+VSDFG+ K ++ T+
Sbjct: 292 LKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQ 343
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G + APE + K + K DV+SFG+L E+
Sbjct: 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 517 FDVKYCIGIGGQGSVYKAK-LTSGEILAVKKF--HSLWPCEMVPQPEFVNEIKTLTELRH 573
F V +G G VY+A+ + +G +A+K +++ MV + + NE+K +L+H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ--NEVKIHCQLKH 70
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
SI++ Y + +LV E G + L N ++ F+ + + + + Y+
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYL 128
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H I+HRD++ N+LL + +++DFG+A LK L GT YI+PE+
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHPRD 721
+ DV+S G + ++ G P D
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 519 VKYCIGIGGQGSVYKAKLT---SGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR 574
++ IG+G G V +L EI +A+K + + + + +F++E + + H
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHP 90
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYM 633
+I+ G + + ++ EY+E GSL L NDG F + ++R + + + Y+
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYL 147
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPE 690
VHRD++++N+L+ + +VSDFG+++ L+ D G + APE
Sbjct: 148 SD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 691 LVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
+ K T DV+S+G++ EV+ G+ P
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 514 TNGFDVKYCIGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
++ + + +G G G V K K+T G+ AVK + + + E++ L +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANAL 630
H +I+K Y F +LV E G L I+S + F+ +IR V + +
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGI 145
Query: 631 SYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYI 687
+YMH + IVHRD+ +N+LL D R+ DFG++ + S + +GT YI
Sbjct: 146 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYI 201
Query: 688 APELVYTMKVTEKCDVYSFGVL 709
APE+++ EKCDV+S GV+
Sbjct: 202 APEVLHGT-YDEKCDVWSTGVI 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 523 IGIGGQGSVYKAKLTSGEIL-AVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+ +L + L AVK P ++ + +F+ E + L + H +IV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
C+ + ++V E ++ G T L +GA + ++ A + Y+ C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF-----GYIAPELVYTMK 696
+HRD++++N L+ ++SDFG++ + ++ G + APE + +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 697 VTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQD 754
+ + DV+SFG+L E F E ++ RLP P+ D
Sbjct: 292 YSSESDVWSFGILLWET--------FSLGASPYPNLSNQQTREFVEKGGRLPC-PELCPD 342
Query: 755 ELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ ++E C P RP T+ Q L
Sbjct: 343 AVFRLMEQ---CWAYEPGQRPSFSTIYQEL 369
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 507 YEEIVRATNGFDVKYCIG-IGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
YE + R N D IG +G G VYKA+ +LA K E + +++ EI
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELE--DYMVEI 58
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIR 624
L H +IVK + N +++ E+ G++ A +L + + E V V +
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV---VCK 115
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI-AKFLKPDSSNCTELVGT 683
+AL+Y+H + I+HRD+ + N+L LD + +++DFG+ AK + +GT
Sbjct: 116 QTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 684 FGYIAPELVYTMKVTE-----KCDVYSFGVLALEVIKGDHP 719
++APE+V + K DV+S G+ +E+ + + P
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 124
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 179
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 61
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 120
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 121 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 175
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 561 FVNEIKTLTELRHRSIVKFYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR 619
F+ E +T+LRH ++V+ G + ++V EY+ +GSL L + G
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCL 110
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ V A+ Y+ + F VHRD++++NVL+ D A+VSDFG+ K ++ T+
Sbjct: 111 LKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQ 162
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G + APE + + K DV+SFG+L E+
Sbjct: 163 DTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 517 FDVKYCIGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQ--PEFVNEIKTLTELRH 573
+++K +G GG G V + +GE +A+K+ E+ P+ + EI+ + +L H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ----ELSPKNRERWCLEIQIMKKLNH 71
Query: 574 RSIVKFY----GFCSHPRNSF--LVYEYLERGSLATILSN--------DGAIEEFNWTVR 619
++V G N L EY E G L L+ +G I
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR------- 124
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSN 676
++ +++AL Y+H + I+HRD+ +N++L + ++ D G AK L
Sbjct: 125 -TLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGEL 179
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
CTE VGT Y+APEL+ K T D +SFG LA E I G P
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 517 FDVKYCIGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQ--PEFVNEIKTLTELRH 573
+++K +G GG G V + +GE +A+K+ E+ P+ + EI+ + +L H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ----ELSPKNRERWCLEIQIMKKLNH 72
Query: 574 RSIVKFY----GFCSHPRNSF--LVYEYLERGSLATILSN--------DGAIEEFNWTVR 619
++V G N L EY E G L L+ +G I
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR------- 125
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSN 676
++ +++AL Y+H + I+HRD+ +N++L + ++ D G AK L
Sbjct: 126 -TLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGEL 180
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
CTE VGT Y+APEL+ K T D +SFG LA E I G P
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTL 568
++ +++ +G GG V+ A+ L +AVK + ++ P F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA----DLARDPSFYLRFRREAQNA 66
Query: 569 TELRHRSIVKFY--GFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
L H +IV Y G P ++V EY++ +L I+ +G + + VI
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIA 123
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE---LV 681
AL++ H + I+HRD+ N+++ +V DFGIA+ + ++ T+ ++
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y++PE V + DVYS G + EV+ G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTL 568
++ +++ +G GG V+ A+ L +AVK + ++ P F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVK----VLRADLARDPSFYLRFRREAQNA 66
Query: 569 TELRHRSIVKFY--GFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
L H +IV Y G P ++V EY++ +L I+ +G + + VI
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIA 123
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE---LV 681
AL++ H + I+HRD+ N+++ +V DFGIA+ + ++ T+ ++
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y++PE V + DVYS G + EV+ G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 519 VKYCIGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+K +G G G V+ A+ T ++L K +L + + +F E + LT L+H
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVK--ALKDPTLAARKDFQREAELLTNLQH 76
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDG-------------AIEEFNWTVRM 620
IVKFYG C +V+EY++ G L L G A E + +
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
++ +A+ + Y+ F VHRD++++N L+ + ++ DFG+++ + S++ +
Sbjct: 137 HIASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRV 191
Query: 681 VGT----FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G ++ PE + K T + DV+SFGV+ E+
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 523 IGIGGQGSVYKAKLTSGEIL-AVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+ +L + L AVK P ++ + +F+ E + L + H +IV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
C+ + ++V E ++ G T L +GA + ++ A + Y+ C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF-----GYIAPELVYTMK 696
+HRD++++N L+ ++SDFG++ + ++ G + APE + +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS---REEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 697 VTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQD 754
+ + DV+SFG+L E F E ++ RLP P+ D
Sbjct: 292 YSSESDVWSFGILLWET--------FSLGASPYPNLSNQQTREFVEKGGRLPC-PELCPD 342
Query: 755 ELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ ++E C P RP T+ Q L
Sbjct: 343 AVFRLMEQ---CWAYEPGQRPSFSTIYQEL 369
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V E +E GSL + L A +F
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQL 120
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 121 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 124
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 179
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V E +E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ + VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKK--FHSLWPCEMVPQPEFVNEIKTLTELR 572
+ F++ +G G G+VY A+ + K F S E V + + EI+ L
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV-EHQLRREIEIQAHLH 81
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H +I++ Y + R +L+ EY RG L L +E ++ +A+AL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT---IMEELADALMY 138
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
H ++HRDI +N+LL L E +++DFG + + S + GT Y+ PE++
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMI 193
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHP 719
EK D++ GVL E++ G+ P
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 30/214 (14%)
Query: 522 CIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
C+G G G V++ GE +AVK F S + E N + LRH +I+ F
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 98
Query: 582 FCSHPRNS----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
R+S +L+ Y E GSL L + + + ++ S+A+ L+++H +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 638 F-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL-----VGTFGYI 687
F P I HRD+ SKN+L+ + + ++D G+A + S+N ++ VGT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 688 APELV-YTMKVT-----EKCDVYSFGVLALEVIK 715
APE++ T++V ++ D+++FG++ EV +
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 124
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 179
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
++ +++ +G GG V+ A+ L +AVK + + F E + L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 573 HRSIVKFY--GFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
H +IV Y G P ++V EY++ +L I+ +G + + VI
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIADACQ 144
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE---LVGTFG 685
AL++ H + I+HRD+ N+++ +V DFGIA+ + ++ T+ ++GT
Sbjct: 145 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
Y++PE V + DVYS G + EV+ G+ P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 124
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 179
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 64
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 123
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 124 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 178
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 25/267 (9%)
Query: 517 FDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
F ++ IG G VY+A L G +A+KK + + + + EI L +L H +
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSV-------AN 628
++K+Y +V E + G L+ + I+ F R+ R+V +
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRM------IKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIA 688
AL +MH ++HRDI NV + ++ D G+ +F ++ LVGT Y++
Sbjct: 148 ALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMS 204
Query: 689 PELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP 748
PE ++ K D++S G L E+ P E D P P
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCKKIEQCD-YPPLP 259
Query: 749 PQNVQDELISIVEVAFLCLNESPESRP 775
+ +EL +V +C+N PE RP
Sbjct: 260 SDHYSEELRQLVN---MCINPDPEKRP 283
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 60
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 119
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 174
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 61
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 120
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 121 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKF 175
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIK-TLTEL 571
T F + I G Y K+ EI+ K Q E N+ + L+ +
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-----------QVEHTNDERLMLSIV 63
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
H I++ +G + F++ +Y+E G L ++L + F V V AL
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALE 120
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y+H I++RD+ +N+LL + +++DFG AK++ PD + L GT YIAPE+
Sbjct: 121 YLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYX--LCGTPDYIAPEV 174
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V T + D +SFG+L E++ G P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 30/214 (14%)
Query: 522 CIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
C+G G G V++ GE +AVK F S + E N + LRH +I+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 582 FCSHPRNS----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
R+S +L+ Y E GSL L + + + ++ S+A+ L+++H +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 638 F-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL-----VGTFGYI 687
F P I HRD+ SKN+L+ + + ++D G+A + S+N ++ VGT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 688 APELV-YTMKVT-----EKCDVYSFGVLALEVIK 715
APE++ T++V ++ D+++FG++ EV +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 28/257 (10%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 72
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKH-- 127
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L + +N E VGT Y++PE + +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPERLQGTHYSV 185
Query: 700 KCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELISI 759
+ D++S G+ +E+ G +PR E+LD + PP + + S+
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPR------------PPMAIFELLDYIVNEPPPKLPSAVFSL 233
Query: 760 VEVAFL--CLNESPESR 774
F+ CL ++P R
Sbjct: 234 EFQDFVNKCLIKNPAER 250
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 60
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 119
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 174
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 62
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 121
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 122 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKF 176
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 62
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 121
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 122 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 176
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 519 VKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+K+ +G G G VY+ + +AVK + + EF+ E + E++H ++V
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ G C+ +++ E++ G+L L + +E N V + + +++A+ Y+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYT 694
F +HRD++++N L+ ++ +V+DFG+++ + D+ T G + APE +
Sbjct: 134 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAY 188
Query: 695 MKVTEKCDVYSFGVLALEV 713
K + K DV++FGVL E+
Sbjct: 189 NKFSIKSDVWAFGVLLWEI 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
++KFH E NEI L L H +I+K + + +LV E+ E G L
Sbjct: 86 IEKFH----------EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD---YEAR 660
+ N +E + N+++ + + + Y+H IVHRDI +N+LL +
Sbjct: 136 QIINRHKFDECDAA---NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189
Query: 661 VSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
+ DFG++ F D + +GT YIAPE V K EKCDV+S GV+
Sbjct: 190 IVDFGLSSFFSKDYK-LRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVI 236
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 30/214 (14%)
Query: 522 CIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
C+G G G V++ GE +AVK F S + E N + LRH +I+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 582 FCSHPRNS----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
R+S +L+ Y E GSL L + + + ++ S+A+ L+++H +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 638 F-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL-----VGTFGYI 687
F P I HRD+ SKN+L+ + + ++D G+A + S+N ++ VGT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 688 APELV-YTMKVT-----EKCDVYSFGVLALEVIK 715
APE++ T++V ++ D+++FG++ EV +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN---I 471
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS---N 676
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 472 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 566
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN---I 472
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS---N 676
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 473 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 567
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G+ + + +LT G +AVK + + + EI+ L RH I+K Y
Sbjct: 21 VGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
S P + F+V EY+ G L + G +EE + + + +A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM---VV 133
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +NVLL A+++DFG++ + D + G+ Y APE++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 702 DVYSFGVLALEVIKGDHPRD 721
D++S GV+ ++ G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 112
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC 677
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 113 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 678 -TELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ G + + APE + K + K DV+SFGVL E
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGS---VYKAKLTSGEILAVKKFHSLWPCEM 555
L F+ YE + R N D IG G G+ VYKA+ +LA K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEF 614
+ +++ EI L H +IVK + N +++ E+ G++ A +L + + E
Sbjct: 78 LE--DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES 135
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674
V V + +AL+Y+H + I+HRD+ + N+L LD + +++DFG++
Sbjct: 136 QIQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 675 SNCTELVGTFGYIAPELVYTMKVTE-----KCDVYSFGVLALEVIKGDHP 719
+GT ++APE+V + K DV+S G+ +E+ + + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ E + APE + T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 192 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 230
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 231 RPDNCPEELYQLMR---LCWKERPEDRP 255
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 84
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 139
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 200 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 238
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 239 RPDNCPEELYQLMR---LCWKERPEDRP 263
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 192 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 230
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 231 RPDNCPEELYQLMR---LCWKERPEDRP 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGS---VYKAKLTSGEILAVKKFHSLWPCEM 555
L F+ YE + R N D IG G G+ VYKA+ +LA K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEF 614
+ +++ EI L H +IVK + N +++ E+ G++ A +L + + E
Sbjct: 78 LE--DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES 135
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674
V V + +AL+Y+H + I+HRD+ + N+L LD + +++DFG++
Sbjct: 136 QIQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 675 SNCTELVGTFGYIAPELVYTMKVTE-----KCDVYSFGVLALEVIKGDHP 719
+GT ++APE+V + K DV+S G+ +E+ + + P
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGS---VYKAKLTSGEILAVKKFHSLWPCEM 555
L F+ YE + R N D IG G G+ VYKA+ +LA K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEF 614
+ +++ EI L H +IVK + N +++ E+ G++ A +L + + E
Sbjct: 78 LE--DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES 135
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674
V V + +AL+Y+H + I+HRD+ + N+L LD + +++DFG++
Sbjct: 136 QIQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 675 SNCTELVGTFGYIAPELVYTMKVTE-----KCDVYSFGVLALEVIKGDHP 719
+GT ++APE+V + K DV+S G+ +E+ + + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 264
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 323
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HR+++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 324 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 378
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 82
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 198 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 236
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 237 RPDNCPEELYQLMR---LCWKERPEDRP 261
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 85
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 140
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 201 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 239
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 240 RPDNCPEELYQLMR---LCWKERPEDRP 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 77
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 132
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 193 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 231
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 232 RPDNCPEELYQLMR---LCWKERPEDRP 256
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 192 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 230
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 231 RPDNCPEELYQLMR---LCWKERPEDRP 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 78
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 133
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 194 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 232
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 233 RPDNCPEELYQLMR---LCWKERPEDRP 257
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 512 RATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTE 570
R F+ C+G GG G V++AK + A+K+ P + + + + E+K L +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAK 59
Query: 571 LRHRSIVKFYGFC-----------SHPRNSFLVYEYLE-----RGSLATILSNDGAIEEF 614
L H IV+++ S P+ VY Y++ + +L ++ IEE
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPK----VYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674
+V +++ +A A+ ++H ++HRD+ N+ +D +V DFG+ + D
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 675 SNCTEL------------VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T L VGT Y++PE ++ + K D++S G++ E++
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 31/205 (15%)
Query: 529 GSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588
G V+KA+L + E +AVK F P + + E+ +L ++H +I++F G + R
Sbjct: 38 GCVWKAQLLN-EYVAVKIF----PIQDKQSWQNEYEVYSLPGMKHENILQFIG--AEKRG 90
Query: 589 S------FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC----- 637
+ +L+ + E+GSL+ L + +W ++ ++A L+Y+H D
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 638 --FPPIVHRDISSKNVLLCLDYEARVSDFGIA-KFLKPDSSNCTE-LVGTFGYIAPELV- 692
P I HRDI SKNVLL + A ++DFG+A KF S+ T VGT Y+APE++
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 693 ----YTMKVTEKCDVYSFGVLALEV 713
+ + D+Y+ G++ E+
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 40/234 (17%)
Query: 511 VRATNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKF-HSLWPCEMVPQPEFVNEIKTL 568
+R + F+ +G G G V KA+ A+KK H+ + ++E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-----LSEVMLL 56
Query: 569 TELRHRSIVKFYGFCSHPRNS-------------FLVYEYLERGSLATILSNDGAIEEFN 615
L H+ +V++Y RN F+ EY E G+L ++ ++ ++ +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK------- 668
R+ R + ALSY+H I+HRD+ N+ + ++ DFG+AK
Sbjct: 117 EYWRL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 669 FLKPD-------SSNCTELVGTFGYIAPELVY-TMKVTEKCDVYSFGVLALEVI 714
LK D S N T +GT Y+A E++ T EK D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+F+ E + + H +I++ G + + +V E +E GSL + L A +F
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQL 149
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ ++R +A+ + Y+ VHRD++++N+L+ + +VSDFG+++ L+ D
Sbjct: 150 VGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 680 LVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + +PE + K T DV+S+G++ EV+ G+ P
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 306
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E N V + +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 365
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HR+++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 366 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 420
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
+ + E+ L L H +I+K Y F RN +LV E + G L + + E + V
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV- 140
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSN 676
+I+ V + ++Y+H IVHRD+ +N+LL D ++ DFG++ + +
Sbjct: 141 --IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKK 194
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
E +GT YIAPE V K EKCDV+S GV+ ++ G
Sbjct: 195 MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 522 CIGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF 579
+G G G V K K+T G+ AVK + + + E++ L +L H +I K
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 580 YGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
Y F +LV E G L I+S + F+ +IR V + ++Y H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYXHKN-- 145
Query: 639 PPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM 695
IVHRD+ +N+LL D R+ DFG++ + S + +GT YIAPE+++
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAPEVLHGT 203
Query: 696 KVTEKCDVYSFGVL 709
EKCDV+S GV+
Sbjct: 204 -YDEKCDVWSTGVI 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 106
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC 677
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 107 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 678 -TELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ G + + APE + K + K DV+SFGVL E
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 202
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 71
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 126
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 187 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 225
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 226 RPDNCPEELYQLMR---LCWKERPEDRP 250
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 126
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-- 675
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 127 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 676 -NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 519 VKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+K+ +G G G VY+ + +AVK + + EF+ E + E++H ++V
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ G C+ +++ E++ G+L L + +E + V + + +++A+ Y+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYT 694
F +HRD++++N L+ ++ +V+DFG+++ + D+ T G + APE +
Sbjct: 130 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAY 184
Query: 695 MKVTEKCDVYSFGVLALEV 713
K + K DV++FGVL E+
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 86
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 141
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 202 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 240
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 241 RPDNCPEELYQLMR---LCWKERPEDRP 265
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 112
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-- 675
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 113 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 676 -NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 517 FDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHR 574
F++ +G G G VYK + + +G++ A+K + + E EI L + HR
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIK----VMDVTGDEEEEIKQEINMLKKYSHHR 81
Query: 575 SIVKFYG--FCSHP----RNSFLVYEYLERGSLATILSN-DGAIEEFNWTVRMNVIRSVA 627
+I +YG +P +LV E+ GS+ ++ N G + W + R +
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREIL 139
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYI 687
LS++H ++HRDI +NVLL + E ++ DFG++ L +GT ++
Sbjct: 140 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 688 APELVYTMKVTE-----KCDVYSFGVLALEVIKGDHP 719
APE++ + + K D++S G+ A+E+ +G P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE----FVNEIKTLTELRHRSIVK 578
IG G G+VYK K + + K + P PE F NE+ L + RH +I+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKV-------VDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
F G+ + N +V ++ E SL L +F +++ R A + Y+H
Sbjct: 97 FMGYMTKD-NLAIVTQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAKN- 152
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIA--KFLKPDSSNCTELVGTFGYIAPELVYTMK 696
I+HRD+ S N+ L ++ DFG+A K S + G+ ++APE++
Sbjct: 153 --IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 697 ---VTEKCDVYSFGVLALEVIKGDHP 719
+ + DVYS+G++ E++ G+ P
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 192 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 230
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 231 RPDNCPEELYQLMR---LCWKERPEDRP 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 118
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-- 675
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 119 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 676 -NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 108
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC 677
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 109 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 678 -TELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ G + + APE + K + K DV+SFGVL E
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 82
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 198 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 236
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 237 RPDNCPEELYQLMR---LCWKERPEDRP 261
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 136
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 197 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 235
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 236 RPDNCPEELYQLMR---LCWKERPEDRP 260
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G+ + + +LT G +AVK + + + EI+ L RH I+K Y
Sbjct: 21 VGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
S P + F+V EY+ G L + G +EE + + + +A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM---VV 133
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +NVLL A+++DFG++ + D G+ Y APE++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 702 DVYSFGVLALEVIKGDHPRD 721
D++S GV+ ++ G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 128
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-- 675
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 129 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 676 -NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT 617
+ E + E + +L + IV+ G C + LV E E G L L + +++ N
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKN-- 128
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-- 675
+ ++ V+ + Y+ F VHRD++++NVLL + A++SDFG++K L+ D +
Sbjct: 129 -IIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 676 -NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + APE + K + K DV+SFGVL E
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQ-PEFVNEIKTLTELRHRSIVKFYG 581
+G GG +VY A+ T I K + P E F E+ ++L H++IV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+LV EY+E +L+ + + G + + +N + + + + H I
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPL---SVDTAINFTNQILDGIKHAHD---MRI 132
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS-SNCTELVGTFGYIAPELVYTMKVTEK 700
VHRDI +N+L+ + ++ DFGIAK L S + ++GT Y +PE E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 701 CDVYSFGVLALEVIKGDHP 719
D+YS G++ E++ G+ P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 60
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E + V + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 119
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 174
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 523 IGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
+G G G V K KLT E A+K ++E+ L +L H +I+K Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
F RN +LV E G L + E + V +++ V + +Y+H
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHK---HN 124
Query: 641 IVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV 697
IVHRD+ +N+LL D ++ DFG++ + E +GT YIAPE V K
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPE-VLRKKY 182
Query: 698 TEKCDVYSFGVL 709
EKCDV+S GV+
Sbjct: 183 DEKCDVWSCGVI 194
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 60
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E + V + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 119
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 174
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E + V + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 124
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 179
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 60
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E + V + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 119
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HRD++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKF 174
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 519 VKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+K+ +G G G VY+ + +AVK + + EF+ E + E++H ++V
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ G C+ +++ E++ G+L L + +E + V + + +++A+ Y+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYT 694
F +HRD++++N L+ ++ +V+DFG+++ + D+ T G + APE +
Sbjct: 130 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESLAY 184
Query: 695 MKVTEKCDVYSFGVLALEV 713
K + K DV++FGVL E+
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 519 VKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+K+ +G G G VY+ + +AVK + + EF+ E + E++H ++V
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ G C+ +++ E++ G+L L + +E + V + + +++A+ Y+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYT 694
F +HRD++++N L+ ++ +V+DFG+++ + D+ T G + APE +
Sbjct: 130 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAY 184
Query: 695 MKVTEKCDVYSFGVLALEV 713
K + K DV++FGVL E+
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 21/255 (8%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ + +AVK +L P M Q F+ E + L+H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK---TLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAV 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+ +GSL L +D + + ++ +A ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-IDFSAQIAEGMAYIERKNY---I 132
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + NVL+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 702 DVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELISIV 760
DV+SFG+L E++ G P PR+ +N DEL I+
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM----PRV----ENCPDELYDIM 244
Query: 761 EVAFLCLNESPESRP 775
+ +C E E RP
Sbjct: 245 K---MCWKEKAEERP 256
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 519 VKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+K+ +G G G VY+ + +AVK + + EF+ E + E++H ++V
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ G C+ +++ E++ G+L L + +E + V + + +++A+ Y+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYT 694
F +HRD++++N L+ ++ +V+DFG+++ + D+ T G + APE +
Sbjct: 132 F---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAY 186
Query: 695 MKVTEKCDVYSFGVLALEV 713
K + K DV++FGVL E+
Sbjct: 187 NKFSIKSDVWAFGVLLWEI 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 523 IGIGGQGSVY--KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
+G G G V K KLT E A+K ++E+ L +L H +I+K Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
F RN +LV E G L + E + V +++ V + +Y+H
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHKH---N 141
Query: 641 IVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV 697
IVHRD+ +N+LL D ++ DFG++ + E +GT YIAPE V K
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPE-VLRKKY 199
Query: 698 TEKCDVYSFGVL 709
EKCDV+S GV+
Sbjct: 200 DEKCDVWSCGVI 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 92
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 150
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 151 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 205
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ K + DV+SFGV+ E+
Sbjct: 206 SLTESKFSVASDVWSFGVVLYEL 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE---TC 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ ++ D+++ G + +++ G P
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 92
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 150
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 151 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 205
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ K + DV+SFGV+ E+
Sbjct: 206 SLTESKFSVASDVWSFGVVLYEL 228
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 48/268 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ +AVK SL M P F+ E + +L+H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ EY+E GSL L I+ +++ +A ++++ + +
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 127
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HR++ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 702 DVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTP------------- 748
DV+SFG+L E++ H R I P + P
Sbjct: 188 DVWSFGILLTEIVT--HGR-------------------IPYPGMTNPEVIQNLERGYRMV 226
Query: 749 -PQNVQDELISIVEVAFLCLNESPESRP 775
P N +EL ++ LC E PE RP
Sbjct: 227 RPDNCPEELYQLMR---LCWKERPEDRP 251
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 136 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 190
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEI 565
Y++ +K+ +G G G VY+ + +AVK + + EF+ E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEA 267
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ E++H ++V+ G C+ +++ E++ G+L L + +E + V + +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 326
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT-- 683
+++A+ Y+ F +HR+++++N L+ ++ +V+DFG+++ + D+ T G
Sbjct: 327 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 381
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ APE + K + K DV++FGVL E+
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 105
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 163
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 164 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 218
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELF 242
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 132
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 187
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 135
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 136 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 190
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 73
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 131
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 132 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 186
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ K + DV+SFGV+ E+
Sbjct: 187 SLTESKFSVASDVWSFGVVLYEL 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 72
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 130
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 131 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 185
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ K + DV+SFGV+ E+
Sbjct: 186 SLTESKFSVASDVWSFGVVLYEL 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 78
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 136
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 137 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 191
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELF 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 81
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 139
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 140 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 194
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELF 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 80
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 138
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 139 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 193
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELF 217
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 132
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 187
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ K + DV+SFGV+ E+
Sbjct: 188 SLTESKFSVASDVWSFGVVLYEL 210
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGS-LATILSNDGAIEEF 614
VP + EI+ L L H +I+K + N ++V E E G L I+S +
Sbjct: 62 VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121
Query: 615 NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLK 671
+ +++ + NAL+Y H +VH+D+ +N+L ++ DFG+A+ K
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
Query: 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
D + T GT Y+APE V+ VT KCD++S GV+ ++ G
Sbjct: 179 SD-EHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 519 VKYCIGIGGQGSVY-----KAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+K+ +G G G VY K LT +AVK + + EF+ E + E++H
Sbjct: 36 MKHKLGGGQYGEVYVGVWKKYSLT----VAVKTLKE----DTMEVEEFLKEAAVMKEIKH 87
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
++V+ G C+ ++V EY+ G+L L + EE V + + +++A+ Y+
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYL 146
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPE 690
F +HRD++++N L+ ++ +V+DFG+++ + D+ T G + APE
Sbjct: 147 EKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPE 201
Query: 691 LVYTMKVTEKCDVYSFGVLALEV 713
+ + K DV++FGVL E+
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTV 618
+F+ E + + H ++V G + + +V E++E G+L L +DG +F
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG---QFTVIQ 146
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
+ ++R +A + Y+ + VHRD++++N+L+ + +VSDFG+++ ++ D
Sbjct: 147 LVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY 203
Query: 679 ELVGT---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G + APE + K T DV+S+G++ EV+ G+ P
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 79
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 137
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 138 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 192
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELF 216
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 78 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 134
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 135 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 80 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 136
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 137 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 78 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 134
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 135 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G+ V K +LT G +AVK + + + EI+ L RH I+K Y
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
S P + F+V EY+ G L + +G ++E + + + + + Y H +V
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLFQQILSGVDYCHRHM---VV 138
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +NVLL A+++DFG++ + D G+ Y APE++ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 702 DVYSFGVLALEVIKGDHPRD 721
D++S GV+ ++ G P D
Sbjct: 198 DIWSSGVILYALLCGTLPFD 217
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 75 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 131
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 55 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 111
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 112 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 75 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 131
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 75 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 131
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G+VY A+ + + E++A+KK + + E++ L +LRH + +++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 582 FCSHPRNSFLVYEYLERGSLATILS-NDGAIEEFNWTVRMNVIRSVANALSYMH-HDCFP 639
++LV EY GS + +L + ++E V L+Y+H H+
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSHN--- 174
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
++HRD+ + N+LL ++ DFG A + P VGT ++APE++ M +
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----ANXFVGTPYWMAPEVILAMDEGQ 229
Query: 700 ---KCDVYSFGVLALEVIKGDHP 719
K DV+S G+ +E+ + P
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP 252
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 77 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 75 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 131
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWT 617
P E ++ L H VK Y FC + Y + G L + G+ +E T
Sbjct: 82 PYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---T 137
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--S 675
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 138 CTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 194
Query: 676 NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 195 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 53 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 109
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 110 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 54 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 110
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 111 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 519 VKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
+K+ +G G G V+ A+ ++AVK +L + +F E + LT L+
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK---ALKEASESARQDFQREAELLTMLQ 101
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDG------------AIEEFNWTVRM 620
H+ IV+F+G C+ R +V+EY+ G L L + G A +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
V VA + Y+ F VHRD++++N L+ ++ DFG+++ + S++ +
Sbjct: 162 AVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRV 216
Query: 681 VGT----FGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
G ++ PE + K T + DV+SFGV+ E+
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 74 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 130
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 131 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 20/177 (11%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL----------ATILSN 607
+ +F E + LT L+H IVKFYG C +V+EY++ G L A +++
Sbjct: 59 RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
E + +++ + +A + Y+ F VHRD++++N L+ + ++ DFG++
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 668 KFLKPDSSNCTELVGT----FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
+ + S++ + G ++ PE + K T + DV+S GV+ E+ G P
Sbjct: 176 RDVY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 74 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 130
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 131 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 52 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 108
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 109 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
VGT Y++PEL+ + D+++ G + +++ G P
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 40/234 (17%)
Query: 511 VRATNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKF-HSLWPCEMVPQPEFVNEIKTL 568
+R + F+ +G G G V KA+ A+KK H+ + ++E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-----LSEVMLL 56
Query: 569 TELRHRSIVKFYGFCSHPRNS-------------FLVYEYLERGSLATILSNDGAIEEFN 615
L H+ +V++Y RN F+ EY E +L ++ ++ ++ +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK------- 668
R+ R + ALSY+H I+HRD+ N+ + ++ DFG+AK
Sbjct: 117 EYWRL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 669 FLKPD-------SSNCTELVGTFGYIAPELVY-TMKVTEKCDVYSFGVLALEVI 714
LK D S N T +GT Y+A E++ T EK D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
P E ++ L H VK Y + Y + G L + G+ +E T
Sbjct: 59 PYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TC 115
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SN 676
+ +AL Y+H I+HRD+ +N+LL D +++DFG AK L P+S +
Sbjct: 116 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 172
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
VGT Y++PEL+ + D+++ G + +++ G
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 526 GGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH 585
G G V+KA+L + + +AVK F P + + EI + ++H ++++F +
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIF----PLQDKQSWQSEREIFSTPGMKHENLLQF--IAAE 78
Query: 586 PRNS------FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC-- 637
R S +L+ + ++GSL L G I W +V +++ LSY+H D
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLK--GNI--ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 638 ------FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS--SNCTELVGTFGYIAP 689
P I HRD SKNVLL D A ++DFG+A +P + VGT Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 690 ELV-----YTMKVTEKCDVYSFGVLALEVI 714
E++ + + D+Y+ G++ E++
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G+VY A+ + + E++A+KK + + E++ L +LRH + +++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 582 FCSHPRNSFLVYEYLERGSLATILS-NDGAIEEFNWTVRMNVIRSVANALSYMH-HDCFP 639
++LV EY GS + +L + ++E V L+Y+H H+
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSHN--- 135
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
++HRD+ + N+LL ++ DFG A + P VGT ++APE++ M +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----ANXFVGTPYWMAPEVILAMDEGQ 190
Query: 700 ---KCDVYSFGVLALEVIKGDHP 719
K DV+S G+ +E+ + P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 132
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK--VKEPGESPIFWYAPE 187
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 519 VKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
+K+ +G G G V+ A+ ++AVK +L + +F E + LT L+
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK---ALKEASESARQDFQREAELLTMLQ 72
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDG------------AIEEFNWTVRM 620
H+ IV+F+G C+ R +V+EY+ G L L + G A +
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
V VA + Y+ F VHRD++++N L+ ++ DFG+++ + S++ +
Sbjct: 133 AVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRV 187
Query: 681 VGT----FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G ++ PE + K T + DV+SFGV+ E+ G P
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 522 CIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
C+G G G V++ L GE +AVK F S + E N + LRH +I+ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL----LRHDNILGFIA 69
Query: 582 FCSHPRNS----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
RNS +L+ Y E GSL L E + +R+ V S A L+++H +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTL--EPHLALRLAV--SAACGLAHLHVEI 125
Query: 638 F-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL-----VGTFGYI 687
F P I HRD S+NVL+ + + ++D G+A + S+ ++ VGT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 688 APELVYTMKVTEKC-------DVYSFGVLALEVIK 715
APE V ++ C D+++FG++ E+ +
Sbjct: 185 APE-VLDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 519 VKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
+K+ +G G G V+ A+ ++AVK +L + +F E + LT L+
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK---ALKEASESARQDFQREAELLTMLQ 78
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDG------------AIEEFNWTVRM 620
H+ IV+F+G C+ R +V+EY+ G L L + G A +
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
V VA + Y+ F VHRD++++N L+ ++ DFG+++ + S++ +
Sbjct: 139 AVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRV 193
Query: 681 VGT----FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHP 719
G ++ PE + K T + DV+SFGV+ E+ G P
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 21/255 (8%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ + +AVK +L P M Q F+ E + L+H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVK---TLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAV 75
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +++ E++ +GSL L +D + + ++ +A ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-IDFSAQIAEGMAYIERKNY---I 131
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEKC 701
HRD+ + NVL+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 702 DVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELISIV 760
+V+SFG+L E++ G P PR+ +N DEL I+
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM----PRM----ENCPDELYDIM 243
Query: 761 EVAFLCLNESPESRP 775
+ +C E E RP
Sbjct: 244 K---MCWKEKAEERP 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 88
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREK--H 143
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 201
Query: 700 KCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELISI 759
+ D++S G+ +E+ G +P E+LD + PP + + S+
Sbjct: 202 QSDIWSMGLSLVEMAVGRYP--------IGSGSGSMAIFELLDYIVNEPPPKLPSGVFSL 253
Query: 760 VEVAFL--CLNESPESRPPM 777
F+ CL ++P R +
Sbjct: 254 EFQDFVNKCLIKNPAERADL 273
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ E+L GSL L E + + + + Y+
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 135
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HRD++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 136 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK--VKEPGESPIFWYAPE 190
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 545 KKFHSLWPCEMVPQPEFVNEIKTLTELR----HRSIVKFYGFCSHPRNSFLVYEYLERGS 600
KK + + +++ + N K +T L+ H +IVK + ++FLV E L G
Sbjct: 33 KKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 601 LATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD---Y 657
L + + F+ T ++R + +A+S+MH +VHRD+ +N+L +
Sbjct: 93 LFERIKKK---KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNL 146
Query: 658 EARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
E ++ DFG A+ PD+ T Y APEL+ E CD++S GV+ ++ G
Sbjct: 147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 718 HP 719
P
Sbjct: 207 VP 208
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
EI L H+ +V F+GF F+V E R SL + A+ E +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YL 123
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R + Y+H + ++HRD+ N+ L D E ++ DFG+A ++ D L GT
Sbjct: 124 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
YIAPE++ + + DV+S G + ++ G P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
EI L H+ +V F+GF F+V E R SL + A+ E +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YL 123
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R + Y+H + ++HRD+ N+ L D E ++ DFG+A ++ D L GT
Sbjct: 124 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
YIAPE++ + + DV+S G + ++ G P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 131
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKH-- 186
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 244
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 245 QSDIWSMGLSLVEMAVGRYP 264
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREK--H 124
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 182
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREK--H 124
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 182
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKH-- 124
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 182
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
EI L H+ +V F+GF F+V E R SL + A+ E +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YL 127
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R + Y+H + ++HRD+ N+ L D E ++ DFG+A ++ D L GT
Sbjct: 128 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
YIAPE++ + + DV+S G + ++ G P
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKH-- 124
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 182
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKH-- 124
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 182
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V+K + SG ++A K H E+ P + + + E++ L E IV F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 96
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
YG + E+++ GSL +L G I E + V +V L+Y+
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLREKH-- 151
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y++PE + +
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSV 209
Query: 700 KCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 210 QSDIWSMGLSLVEMAVGRYP 229
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ A +AVK ++ P M + F+ E + L+H +VK +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 78
Query: 583 CSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ +++ E++ +GSL L S++G+ + + + +A ++++ +
Sbjct: 79 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA--QIAEGMAFIEQRNY--- 132
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEK 700
+HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 701 CDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELISI 759
DV+SFG+L +E++ G P R+P P+N +EL +I
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-------RMPR-PENCPEELYNI 244
Query: 760 VEVAFLCLNESPESRPPMHTVCQLL 784
+ C PE RP + +L
Sbjct: 245 M---MRCWKNRPEERPTFEYIQSVL 266
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +GE++AVKK + +F EI+ L L+H +IV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 75
Query: 578 KFYGFC--SHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
K+ G C + RN L+ EYL GSL L E + + + + Y+
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGT 133
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG-----YIAPE 690
+ +HR+++++N+L+ + ++ DFG+ K L D V G + APE
Sbjct: 134 KRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK--VKEPGESPIFWYAPE 188
Query: 691 LVYTMKVTEKCDVYSFGVLALEVI 714
+ K + DV+SFGV+ E+
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELF 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AV+ Q F E++ + L H +IVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G ++E + R + +A+ Y H IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + E G+ Y APEL K +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDEFCGSPPYAAPELFQGKKYDGPEV 194
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVP--QPEFVNEIKTLTELRHRSIVKF 579
+G G G V K + SG I+A K H E+ P + + + E++ L E IV F
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIH----LEIKPAIRNQIIRELQVLHECNSPYIVGF 79
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAI-EEFNWTVRMNVIRSVANALSYMHHDCF 638
YG + E+++ GSL +L I EE V + V+R +A L H
Sbjct: 80 YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA-YLREKHQ--- 135
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT 698
I+HRD+ N+L+ E ++ DFG++ L +N VGT Y+APE + +
Sbjct: 136 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMAPERLQGTHYS 191
Query: 699 EKCDVYSFGVLALEVIKGDHP 719
+ D++S G+ +E+ G +P
Sbjct: 192 VQSDIWSMGLSLVELAVGRYP 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
EI L H+ +V F+GF F+V E R SL + A+ E +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YL 145
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R + Y+H + ++HRD+ N+ L D E ++ DFG+A ++ D L GT
Sbjct: 146 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
YIAPE++ + + DV+S G + ++ G P
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
EI L H+ +V F+GF F+V E R SL + A+ E +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YL 147
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R + Y+H + ++HRD+ N+ L D E ++ DFG+A ++ D L GT
Sbjct: 148 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
YIAPE++ + + DV+S G + ++ G P
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ A +AVK ++ P M + F+ E + L+H +VK +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 251
Query: 583 CSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ +++ E++ +GSL L S++G+ + + + +A ++++ +
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA--QIAEGMAFIEQRNY--- 305
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG-TFGYIAPELVYTMKVTEK 700
+HRD+ + N+L+ +++DFG+A+ ++ + E + APE + T K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 701 CDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELISI 759
DV+SFG+L +E++ G P R+P P+N +EL +I
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-------RMPR-PENCPEELYNI 417
Query: 760 VEVAFLCLNESPESRPPMHTVCQLL 784
+ C PE RP + +L
Sbjct: 418 M---MRCWKNRPEERPTFEYIQSVL 439
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 13/136 (9%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
FLV++ + +G L L+ A+ E +++RS+ A+S++H + IVHRD+ +
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEAVSFLHANN---IVHRDLKPE 229
Query: 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVT-----EKCDV 703
N+LL + + R+SDFG + L+P EL GT GY+APE++ +M T ++ D+
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 704 YSFGVLALEVIKGDHP 719
++ GV+ ++ G P
Sbjct: 289 WACGVILFTLLAGSPP 304
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 507 YEEIVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
Y+E+++ +++ IG GG V A + +GE++A+K +P+ EI
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR--IKTEI 59
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIR 624
+ L LRH+ I + Y F+V EY G L I+S D EE R+ V R
Sbjct: 60 EALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRV-VFR 115
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL---V 681
+ +A++Y+H + HRD+ +N+L ++ ++ DFG+ KP + L
Sbjct: 116 QIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQTCC 170
Query: 682 GTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIKGDHPRD 721
G+ Y APEL+ + + DV+S G+L ++ G P D
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPE--FVNEIKTLTELRH 573
F+ K +G G V A+ +G++ AVK P + + E NEI L +++H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI----PKKALKGKESSIENEIAVLRKIKH 79
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+IV P + +LV + + G L + G E + + +IR V +A+ Y+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYL 136
Query: 634 HHDCFPPIVHRDISSKNVLL-CLDYEARV--SDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
H IVHRD+ +N+L D E+++ SDFG++K ++ + GT GY+APE
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPE 192
Query: 691 LVYTMKVTEKCDVYSFGVLA 710
++ ++ D +S GV+A
Sbjct: 193 VLAQKPYSKAVDCWSIGVIA 212
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 511 VRATNGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKF-HSLWPCEMVPQPEFVNEIKTL 568
+R + F+ +G G G V KA+ A+KK H+ + ++E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-----LSEVXLL 56
Query: 569 TELRHRSIVKFYGFCSHPRNS-------------FLVYEYLERGSLATILSNDGAIEEFN 615
L H+ +V++Y RN F+ EY E +L ++ ++ ++ +
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK------- 668
R+ R + ALSY+H I+HR++ N+ + ++ DFG+AK
Sbjct: 117 EYWRL--FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 669 FLKPD-------SSNCTELVGTFGYIAPELVY-TMKVTEKCDVYSFGVLALEVI 714
LK D S N T +GT Y+A E++ T EK D YS G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
EI L H+ +V F+GF F+V E R SL + A+ E +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YL 121
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R + Y+H + ++HRD+ N+ L D E ++ DFG+A ++ D L GT
Sbjct: 122 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
YIAPE++ + + DV+S G + ++ G P
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTLTELRHRSIV 577
+G GG Y+ + + E+ A K + P M+ +P + EI L + +V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGK----VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 89
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
F+GF ++V E R SL + A+ E M R + Y+H++
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNN- 145
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV 697
++HRD+ N+ L D + ++ DFG+A ++ D +L GT YIAPE++
Sbjct: 146 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + D++S G + ++ G P
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPP 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 18 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 75
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 130
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 190
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 191 AVDIWSLGCIFAEMV 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + LS+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 571 LRHRSIVKFYGFCSHPRNSF-LVYEYLERGSLAT-ILSNDGAIEE---FNWTVRMNVIRS 625
L H IV+ G C P +S LV +YL GSL + + GA+ NW V+
Sbjct: 72 LDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------ 123
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC--TELVGT 683
+A + Y+ +VHR+++++NVLL + +V+DFG+A L PD +E
Sbjct: 124 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
++A E ++ K T + DV+S+GV E++
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTLTELRHRSIV 577
+G GG Y+ + + E+ A K + P M+ +P + EI L + +V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGK----VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
F+GF ++V E R SL + A+ E M R + Y+H++
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNN- 161
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV 697
++HRD+ N+ L D + ++ DFG+A ++ D +L GT YIAPE++
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + D++S G + ++ G P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+K + +G+I+A+KKF ++ + + EI+ L +L+H ++V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA-LREIRMLKQLKHPNLVNLLE 69
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA----NALSYMH-HD 636
R LV+EY + T+L ++ + V ++++S+ A+++ H H+
Sbjct: 70 VFRRKRRLHLVFEYCDH----TVLHE---LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTM 695
C +HRD+ +N+L+ ++ DFG A+ L S + V T Y +PE LV
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ DV++ G + E++ G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 571 LRHRSIVKFYGFCSHPRNSF-LVYEYLERGSLAT-ILSNDGAIEE---FNWTVRMNVIRS 625
L H IV+ G C P +S LV +YL GSL + + GA+ NW V+
Sbjct: 90 LDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------ 141
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC--TELVGT 683
+A + Y+ +VHR+++++NVLL + +V+DFG+A L PD +E
Sbjct: 142 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
++A E ++ K T + DV+S+GV E++
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AVK Q F E++ + L H +IVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G ++E + R + +A+ Y H IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + G+ Y APEL K +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEV 194
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRH 573
F++ IG G G V KL + + + K + W EM+ + E F E L
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNGDS 133
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSN--DGAIEEFNWTVRMNVIRSVANALS 631
+ I + N +LV +Y G L T+LS D EE ++ ++ +++
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSVH 192
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA-KFLKPDSSNCTELVGTFGYIAPE 690
+H+ VHRDI N+L+ ++ R++DFG K ++ + + VGT YI+PE
Sbjct: 193 QLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 691 LVYTM-----KVTEKCDVYSFGVLALEVIKGDHP 719
++ M + +CD +S GV E++ G+ P
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 14 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 71
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L T + + A+ + + + + L++ H
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 185
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 18 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 75
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 130
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 190
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 191 AVDIWSLGCIFAEMV 205
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 10 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 67
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E++ + L T + + A+ + + + + L++ H
Sbjct: 68 DVIHTENKLYLVFEHVHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AVK Q F E++ + L H +IVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G ++E + R + +A+ Y H IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + G+ Y APEL K +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEV 194
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 12 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 69
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AVK Q F E++ + L H +IVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G ++E + R + +A+ Y H IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + G Y APEL K +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 10 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 67
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 10 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 67
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQP--EFVNEIK 566
I++ T VK +G G G+VYK + GE + + + P+ EF++E
Sbjct: 34 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 567 TLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRMNV 622
+ + H +V+ G C P LV + + G L + N G+ NW V+
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ--- 148
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+A + Y+ +VHRD++++NVL+ +++DFG+A+ L+ D G
Sbjct: 149 ---IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 202
Query: 683 TF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXE 739
++A E ++ K T + DV+S+GV E++ G P D E
Sbjct: 203 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD------------GIPTRE 250
Query: 740 ILD-----PRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
I D RLP PP D + +V+ C +SRP
Sbjct: 251 IPDLLEKGERLPQPPICTIDVYMVMVK----CWMIDADSRP 287
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSG----EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
F++ +G G G V+ K SG ++ A+K ++ + E L E+
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA-TLKVRDRVRTKMERDILVEVN 85
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H IVK + +L+ ++L G L T LS + E + + +A AL +
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALALDH 142
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+H I++RD+ +N+LL + +++DFG++K GT Y+APE+V
Sbjct: 143 LHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T+ D +SFGVL E++ G P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSG----EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
F++ +G G G V+ K SG ++ A+K ++ + E L E+
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA-TLKVRDRVRTKMERDILVEVN 84
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H IVK + +L+ ++L G L T LS + E + + +A AL +
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALALDH 141
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+H I++RD+ +N+LL + +++DFG++K GT Y+APE+V
Sbjct: 142 LHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T+ D +SFGVL E++ G P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 15 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 72
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 127
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 188 AVDIWSLGCIFAEMV 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AVK Q F E++ + L H +IVK +
Sbjct: 16 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 74
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G ++E + R + +A+ Y H IV
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK---FRQIVSAVQYCHQKF---IV 128
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + G+ Y APEL K +
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEV 187
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 188 DVWSLGVILYTLVSGSLPFD 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTLTELRHRSIV 577
+G GG Y+ + + E+ A K + P M+ +P + EI L + +V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGK----VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
F+GF ++V E R SL + A+ E M R + Y+H++
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNN- 161
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV 697
++HRD+ N+ L D + ++ DFG+A ++ D L GT YIAPE++
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + D++S G + ++ G P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFH--------SLWPCEMVPQPEFVN 563
AT+ ++ IG+G G+VYKA+ SG +A+K P V + V
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE---VA 63
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTV 618
++ L H ++V+ C+ R LV+E++++ L T L T+
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETI 122
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
+ +++R L ++H +C IVHRD+ +N+L+ +++DFG+A+ + T
Sbjct: 123 K-DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LT 177
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
+V T Y APE++ D++S G + E+ +
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 41/220 (18%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNE--IKTLTELRHRSIVKFY 580
IG G G+VYK L + AVK F + F+NE I + + H +I +F
Sbjct: 21 IGRGRYGAVYKGSLDERPV-AVKVF------SFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 581 ----GFCSHPRNSFL-VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
+ R +L V EY GSL LS + +W + SV L+Y+H
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLS----LHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 636 DC------FPPIVHRDISSKNVLLCLDYEARVSDFGIA------KFLKP---DSSNCTEL 680
+ P I HRD++S+NVL+ D +SDFG++ + ++P D++ +E
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE- 188
Query: 681 VGTFGYIAPELVY-------TMKVTEKCDVYSFGVLALEV 713
VGT Y+APE++ ++ D+Y+ G++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQP----EFVNEIKTLTELRHRSIV 577
+G GG Y+ + + E+ A K + P M+ +P + EI L + +V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGK----VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
F+GF ++V E R SL + A+ E M R + Y+H++
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNN- 161
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV 697
++HRD+ N+ L D + ++ DFG+A ++ D L GT YIAPE++
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 698 TEKCDVYSFGVLALEVIKGDHP 719
+ + D++S G + ++ G P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
+I F++ +G G G V+ A+ + + A+K ++V + V T
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK----DVVLMDDDVE--CT 65
Query: 568 LTELRHRSIVKFYGFCSH-------PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+ E R S+ + F +H N F V EYL G L + + +F+ +
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRAT 122
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+ L ++H IV+RD+ N+LL D +++DFG+ K + E
Sbjct: 123 FYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF 179
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT YIAPE++ K D +SFGVL E++ G P
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQP--EFVNEIK 566
I++ T VK +G G G+VYK + GE + + + P+ EF++E
Sbjct: 11 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 567 TLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRMNV 622
+ + H +V+ G C P LV + + G L + N G+ NW V+
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ--- 125
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+A + Y+ +VHRD++++NVL+ +++DFG+A+ L+ D G
Sbjct: 126 ---IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
Query: 683 TF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXE 739
++A E ++ K T + DV+S+GV E++ G P D E
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD------------GIPTRE 227
Query: 740 ILD-----PRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
I D RLP PP D + +V+ C +SRP
Sbjct: 228 IPDLLEKGERLPQPPICTIDVYMVMVK----CWMIDADSRP 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AV+ Q F E++ + L H +IVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G ++E + R + +A+ Y H IV
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + G+ Y APEL K +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEV 194
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 113
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 170 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSG----EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
F++ +G G G V+ K SG ++ A+K ++ + E L E+
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA-TLKVRDRVRTKMERDILVEVN 84
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H IVK + +L+ ++L G L T LS + E + + +A AL +
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALALDH 141
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+H I++RD+ +N+LL + +++DFG++K GT Y+APE+V
Sbjct: 142 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 693 YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T+ D +SFGVL E++ G P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFH--SLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
G+G+ K KL +G +AVK L P + + E++ + L H +IVK +
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL---QKLFREVRIMKILNHPNIVKLF 80
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ +LV EY G + L G ++E + R + +A+ Y H
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKY--- 134
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-E 699
IVHRD+ ++N+LL D +++DFG + + G+ Y APEL K
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 700 KCDVYSFGVLALEVIKGDHPRD 721
+ DV+S GV+ ++ G P D
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFD 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 94
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS----NCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 151 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 114
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 171 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFY 580
+G G G V+K+ +GE++AVKK + Q F EI LTEL H +IV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 581 GF--CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
+ R+ +LV++Y+E A I +N +E + + V+ + + Y+H
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRAN--ILEPVH---KQYVVYQLIKVIKYLHSGG- 129
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKF---------------------LKPDSSNC 677
++HRD+ N+LL + +V+DFG+++ D
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 678 TELVGTFGYIAPE-LVYTMKVTEKCDVYSFGVLALEVIKG 716
T+ V T Y APE L+ + K T+ D++S G + E++ G
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 95
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 152 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFH--SLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
G+G+ K KL +G +A+K L P + + E++ + L H +IVK +
Sbjct: 21 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL---QKLFREVRIMKILNHPNIVKLF 77
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ +L+ EY G + L G ++E + R + +A+ Y H
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQ---KR 131
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-E 699
IVHRD+ ++N+LL D +++DFG + T G+ Y APEL K
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPPYAAPELFQGKKYDGP 190
Query: 700 KCDVYSFGVLALEVIKGDHPRD 721
+ DV+S GV+ ++ G P D
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 87
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 144 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
AT+ ++ IG+G G+VYKA+ SG +A+K E +P V E+ L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI-STVREVALLRRL 60
Query: 572 R---HRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
H ++V+ C+ R LV+E++++ L T L T++ +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLM 118
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R L ++H +C IVHRD+ +N+L+ +++DFG+A+ + +V T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVT 174
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
Y APE++ D++S G + E+ +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 92
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 149 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 15 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 72
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 127
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 186
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 187 TAVDIWSLGCIFAEMV 202
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVN---EIKTLTEL 571
+ F++ IG G G V + + + K+ + C V + E N E++ + L
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC--VERNEVRNVFKELQIMQGL 72
Query: 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALS 631
H +V + + F+V + L G L L + +E TV++ + V AL
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE--ETVKLFICELVM-ALD 129
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y+ + I+HRD+ N+LL ++DF IA L P + T + GT Y+APE+
Sbjct: 130 YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEM 185
Query: 692 VYTMK---VTEKCDVYSFGVLALEVIKGDHP 719
+ K + D +S GV A E+++G P
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 90
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 147 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 14 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 71
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 185
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 14 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 71
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 185
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 13 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 70
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 184
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 185 TAVDIWSLGCIFAEMV 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 12 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 69
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 183
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 TAVDIWSLGCIFAEMV 199
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 93
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 150 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 95
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 152 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 94
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + Y+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 151 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
G + ++V AT G+G + +V K +AVK S + +
Sbjct: 55 GAGAFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKS--TAHADEKEALM 97
Query: 563 NEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSL-------ATILSNDGAIEEF 614
+E+K ++ L +H +IV G C+H ++ EY G L + +L D A
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 615 NWTVR----MNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669
N T+ ++ VA ++++ +C +HRD++++NVLL + A++ DFG+A+
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 670 LKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ DS+ + ++APE ++ T + DV+S+G+L E+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFH--SLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
G+G+ K KL +G +A+K L P + + E++ + L H +IVK +
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL---QKLFREVRIMKILNHPNIVKLF 80
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ +L+ EY G + L G ++E + R + +A+ Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQ---KR 134
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-E 699
IVHRD+ ++N+LL D +++DFG + G Y APEL K
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 700 KCDVYSFGVLALEVIKGDHPRD 721
+ DV+S GV+ ++ G P D
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFD 215
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
AT+ ++ IG+G G+VYKA+ SG +A+K E +P V E+ L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI-STVREVALLRRL 60
Query: 572 R---HRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
H ++V+ C+ R LV+E++++ L T L T++ +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLM 118
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R L ++H +C IVHRD+ +N+L+ +++DFG+A+ + +V T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVT 174
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
Y APE++ D++S G + E+ +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 13 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 70
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 184
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 185 TAVDIWSLGCIFAEMV 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 10 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 67
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 181
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 182 TAVDIWSLGCIFAEMV 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 10 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 67
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 181
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 182 TAVDIWSLGCIFAEMV 197
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 523 IGIGGQGSVYKA--KLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF 579
+G G GSV + ++ +I +A+K E E + E + + +L + IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ--GTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
G C LV E G L L G EE + ++ V+ + Y+ F
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKNF- 131
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL-VGTF--GYIAPELVYTMK 696
VHRD++++NVLL + A++SDFG++K L D S T G + + APE + K
Sbjct: 132 --VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 697 VTEKCDVYSFGVLALEVI 714
+ + DV+S+GV E +
Sbjct: 190 FSSRSDVWSYGVTMWEAL 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 182
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 TAVDIWSLGCIFAEMV 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 182
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 TAVDIWSLGCIFAEMV 198
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWT 617
+ EI+ L L H +IVK+ G C+ + L+ E+L GSL L + + N
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLK 126
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC 677
++ + + Y+ + VHRD++++NVL+ +++ ++ DFG+ K ++ D
Sbjct: 127 QQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 678 T---ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + + APE + K DV+SFGV E++
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 12 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 69
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 183
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 TAVDIWSLGCIFAEMV 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 182
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 TAVDIWSLGCIFAEMV 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 182
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 TAVDIWSLGCIFAEMV 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWT 617
+ EI+ L L H +IVK+ G C+ + L+ E+L GSL L + + N
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLK 114
Query: 618 VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC 677
++ + + Y+ + VHRD++++NVL+ +++ ++ DFG+ K ++ D
Sbjct: 115 QQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 678 T---ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
T + + APE + K DV+SFGV E++
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 507 YEEIVRATNG-------FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQP 559
YE+IV+ G +DV IG G G V +++ K ++ +++ +
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEV--------QLVRHKASQKVYAMKLLSKF 111
Query: 560 EFVNEIKTLTELRHRSIVKFYG-------FCSHPRNSFL--VYEYLERGSLATILSNDGA 610
E + + R I+ F FC+ + +L V EY+ G L ++SN
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV 171
Query: 611 IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670
E++ V+ ++ +A+ M ++HRD+ N+LL +++DFG +
Sbjct: 172 PEKWAKFYTAEVVLAL-DAIHSMG------LIHRDVKPDNMLLDKHGHLKLADFGTC--M 222
Query: 671 KPDSS---NCTELVGTFGYIAPELVYTMK----VTEKCDVYSFGVLALEVIKGDHP 719
K D + +C VGT YI+PE++ + +CD +S GV E++ GD P
Sbjct: 223 KMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 13 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 70
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 184
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 185 TAVDIWSLGCIFAEMV 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+ K E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+ K E VP + EI L EL H +IVK
Sbjct: 10 IGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 67
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTE 699
++HRD+ +N+L+ + +++DFG+A+ T V T Y APE++ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 700 KCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
G + ++V AT G+G + +V K +AVK S + +
Sbjct: 55 GAGAFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKST--AHADEKEALM 97
Query: 563 NEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSL-------ATILSNDGAIEEF 614
+E+K ++ L +H +IV G C+H ++ EY G L + +L D A
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 615 NWTVR----MNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669
N T ++ VA ++++ +C +HRD++++NVLL + A++ DFG+A+
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 670 LKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ DS+ + ++APE ++ T + DV+S+G+L E+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM---KRAVDCPENIKKEIXINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 12 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 69
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 183
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 TAVDIWSLGCIFAEMV 199
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 96
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGT---FGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ L + + G ++A E
Sbjct: 153 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
G + ++V AT G+G + +V K +AVK S + +
Sbjct: 47 GAGAFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKS--TAHADEKEALM 89
Query: 563 NEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEY---------LERGSLATILSNDGAIE 612
+E+K ++ L +H +IV G C+H ++ EY L R + A + DG
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 613 EFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671
E + + VA ++++ +C +HRD++++NVLL + A++ DFG+A+ +
Sbjct: 150 ELRDLLHFS--SQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM 203
Query: 672 PDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
DS+ + ++APE ++ T + DV+S+G+L E+
Sbjct: 204 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 11 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 68
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L + L + + A+ + + + + L++ H
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 182
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 183 TAVDIWSLGCIFAEMV 198
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 516 GFDVKYC--IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
G D K IG GG G V+KAK G+ +K+ + E + E+K L +L
Sbjct: 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK--YNNEKAER-----EVKALAKLD 62
Query: 573 HRSIVKF----YGFCSHPRNS------------FLVYEYLERGSLATILSNDGAIEEFNW 616
H +IV + GF P S F+ E+ ++G+L + E+ +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDK 121
Query: 617 TVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN 676
+ + + + + Y+H +++RD+ N+ L + ++ DFG+ LK D
Sbjct: 122 VLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
GT Y++PE + + ++ D+Y+ G++ E++
Sbjct: 179 XRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM---KRAVDCPENIKKEIXINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEIXINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 154
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 211 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571
AT+ ++ IG+G G+VYKA+ SG +A+K E +P V E+ L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI-STVREVALLRRL 60
Query: 572 R---HRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
H ++V+ C+ R LV+E++++ L T L T++ +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLM 118
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
R L ++H +C IVHRD+ +N+L+ +++DFG+A+ + +V T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LFPVVVT 174
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
Y APE++ D++S G + E+ +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 14 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 71
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E++++ L + + A+ + + + + L++ H
Sbjct: 72 DVIHTENKLYLVFEHVDQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 185
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 527 GQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+G+ K KL +G+ +AVK Q F E++ L H +IVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVKLFEV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+ +LV EY G + L G +E + R + +A+ Y H IV
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF---IV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKC 701
HRD+ ++N+LL D +++DFG + + G Y APEL K +
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 702 DVYSFGVLALEVIKGDHPRD 721
DV+S GV+ ++ G P D
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE---FV 562
L +E+ F++ IG G G V K+ + E + K + W EM+ + E F
Sbjct: 81 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKRAETACFR 138
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSN-DGAIEEFNWTVRMN 621
E L + I + + +LV +Y G L T+LS + + E +
Sbjct: 139 EERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG 198
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-NCTEL 680
+ +++ +H+ VHRDI NVLL ++ R++DFG + D + +
Sbjct: 199 EMVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 681 VGTFGYIAPELVYTM-----KVTEKCDVYSFGVLALEVIKGDHP 719
VGT YI+PE++ M K +CD +S GV E++ G+ P
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE---FV 562
L +E+ F++ IG G G V K+ + E + K + W EM+ + E F
Sbjct: 65 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKRAETACFR 122
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSN-DGAIEEFNWTVRMN 621
E L + I + + +LV +Y G L T+LS + + E +
Sbjct: 123 EERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG 182
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-NCTEL 680
+ +++ +H+ VHRDI NVLL ++ R++DFG + D + +
Sbjct: 183 EMVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 681 VGTFGYIAPELVYTM-----KVTEKCDVYSFGVLALEVIKGDHP 719
VGT YI+PE++ M K +CD +S GV E++ G+ P
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 100
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 157 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
G + ++V AT G+G + +V K +AVK S + +
Sbjct: 55 GAGAFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKST--AHADEKEALM 97
Query: 563 NEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEY---------LERGSLATILSNDGAIE 612
+E+K ++ L +H +IV G C+H ++ EY L R + A + DG
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 613 EFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671
E + + VA ++++ +C +HRD++++NVLL + A++ DFG+A+ +
Sbjct: 158 ELRDLLHFS--SQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM 211
Query: 672 PDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
DS+ + ++APE ++ T + DV+S+G+L E+
Sbjct: 212 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 95
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 152 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 14 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 71
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L L + + A+ + + + + L++ H
Sbjct: 72 DVIHTENKLYLVFEFLSM-DLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 185
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 96
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL---KPDS-SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + + DS N T ++A E
Sbjct: 153 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 13 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 70
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L L + + A+ + + + + L++ H
Sbjct: 71 DVIHTENKLYLVFEFLSM-DLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 184
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 185 TAVDIWSLGCIFAEMV 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 14 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 71
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L L + + A+ + + + + L++ H
Sbjct: 72 DVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 185
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 186 TAVDIWSLGCIFAEMV 201
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 517 FDVKYCIGIGGQGSVYKAK----LTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTEL 571
F++ +G GG G V++ + +G+I A+K E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 572 RHRSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANAL 630
+H IV Y F + + +L+ EYL G L L +G E + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACF---YLAEISMAL 134
Query: 631 SYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
++H I++RD+ +N++L +++DFG+ K D + GT Y+APE
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 691 LVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
++ D +S G L +++ G P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 517 FDVKYCIGIGGQGSVYKAK----LTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTEL 571
F++ +G GG G V++ + +G+I A+K E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 572 RHRSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANAL 630
+H IV Y F + + +L+ EYL G L L +G E + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 631 SYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
++H I++RD+ +N++L +++DFG+ K D + GT Y+APE
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 691 LVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
++ D +S G L +++ G P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 95
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 152 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 523 IGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
IG G G VYKA KLT GE++A+KK E VP + EI L EL H +IVK
Sbjct: 12 IGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTA-IREISLLKELNHPNIVKLL 69
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+LV+E+L L + + A+ + + + + L++ H
Sbjct: 70 DVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMK-VT 698
++HRD+ +N+L+ + +++DFG+A+ F P + E+V T Y APE++ K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYS 183
Query: 699 EKCDVYSFGVLALEVI 714
D++S G + E++
Sbjct: 184 TAVDIWSLGCIFAEMV 199
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINAMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 523 IGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G VY L + AVK + + V Q F+ E + + H +++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHPNVLS 93
Query: 579 FYGFCSHPRNS-FLVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHH 635
G C S +V Y++ G L + N E N TV+ + VA + ++
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS----SNCTELVGTFGYIAPEL 691
F VHRD++++N +L + +V+DFG+A+ + N T ++A E
Sbjct: 150 KKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ T K T K DV+SFGVL E++ P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
E + E + + +L + IV+ G C LV E G L L G EE +
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNV 438
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
++ V+ + Y+ F VHR+++++NVLL + A++SDFG++K L D S T
Sbjct: 439 AELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495
Query: 680 LVG---TFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ APE + K + + DV+S+GV E +
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 65
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 122
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 63
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 120
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G G V+ A +AVK ++ P M + F+ E + L+H +VK +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 245
Query: 583 CSHPRNSFLVYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ +++ E++ +GSL L S++G+ + + + +A ++++ +
Sbjct: 246 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA--QIAEGMAFIEQRNY--- 299
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT---FGYIAPELVYTMKVT 698
+HRD+ + N+L+ +++DFG+A+ VG + APE + T
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLAR------------VGAKFPIKWTAPEAINFGSFT 347
Query: 699 EKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNVQDELI 757
K DV+SFG+L +E++ G P R+P P+N +EL
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-------RMPR-PENCPEELY 399
Query: 758 SIVEVAFLCLNESPESRPPMHTVCQLL 784
+I+ C PE RP + +L
Sbjct: 400 NIM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 516 GFDVKYC--IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
G D K IG GG G V+KAK G+ +++ + E + E+K L +L
Sbjct: 11 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK--YNNEKAER-----EVKALAKLD 63
Query: 573 HRSIVKF----YGFCSHPRNS-------------------------FLVYEYLERGSLAT 603
H +IV + GF P S F+ E+ ++G+L
Sbjct: 64 HVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSD 663
+ E+ + + + + + + Y+H ++HRD+ N+ L + ++ D
Sbjct: 124 WIEKRRG-EKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 664 FGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+ LK D T GT Y++PE + + ++ D+Y+ G++ E++
Sbjct: 180 FGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM---KRAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAI-------- 611
+ ++E L ++ H ++K YG CS L+ EY + GSL L +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 612 ---------EEFNWTVRMNVIRSVANALSY-MHHDCFPPIVHRDISSKNVLLCLDYEARV 661
+ M + S A +S M + +VHRD++++N+L+ + ++
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 662 SDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
SDFG+++ + + S G ++A E ++ T + DV+SFGVL E++
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 517 FDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHR 574
+D+ +G G G V A + E +AVK V PE + EI L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---RAVDCPENIKKEICINKMLNHE 64
Query: 575 SIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++VKFYG +L EY G L + D + E + + + Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH 121
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELV 692
I HRDI +N+LL ++SDFG+A + ++ ++ GT Y+APEL+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 693 YTMKV-TEKCDVYSFGVLALEVIKGDHPRD 721
+ E DV+S G++ ++ G+ P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAI-------- 611
+ ++E L ++ H ++K YG CS L+ EY + GSL L +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 612 ---------EEFNWTVRMNVIRSVANALSY-MHHDCFPPIVHRDISSKNVLLCLDYEARV 661
+ M + S A +S M + +VHRD++++N+L+ + ++
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKI 191
Query: 662 SDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
SDFG+++ + + S G ++A E ++ T + DV+SFGVL E++
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V++ K GE +AVK F S + E + LRH +I+ F
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 91
Query: 583 CSHPRNSF----LVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHHD 636
+ ++ LV +Y E GSL L+ + TV + + S A+ L+++H +
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHME 145
Query: 637 CF-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT------ELVGTFG 685
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T VGT
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 203
Query: 686 YIAPELV---YTMKVTE---KCDVYSFGVLALEVIK 715
Y+APE++ MK E + D+Y+ G++ E+ +
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V++ K GE +AVK F S + E + LRH +I+ F
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 104
Query: 583 CSHPRNSF----LVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHHD 636
+ ++ LV +Y E GSL L+ + TV + + S A+ L+++H +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHME 158
Query: 637 CF-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT------ELVGTFG 685
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T VGT
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 216
Query: 686 YIAPELV---YTMKVTE---KCDVYSFGVLALEVIK 715
Y+APE++ MK E + D+Y+ G++ E+ +
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G+V+KAK + EI+A+K+ E VP + EI L EL+H++IV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ LV+E+ ++ S +G ++ + + + + L + H +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSRN---V 122
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMKV-TE 699
+HRD+ +N+L+ + E +++DFG+A+ F P E+V T Y P++++ K+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYST 181
Query: 700 KCDVYSFGVLALEVIKGDHP 719
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAARP 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 54/296 (18%)
Query: 523 IGIGGQGSVYKAK------LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
IG G G V++A+ ++AVK +M Q +F E + E + +I
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALMAEFDNPNI 112
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDG-----AIEEFNWTVRMNV--------- 622
VK G C+ + L++EY+ G L L + ++ + + R V
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 623 -------IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI------AKF 669
R VA ++Y+ F VHRD++++N L+ + +++DFG+ A +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXX 728
K D ++ + ++ PE ++ + T + DV+++GV+ E+ G P
Sbjct: 230 YKADGNDAIPI----RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP--------Y 277
Query: 729 XXXXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
+ D + P+N EL +++ LC ++ P RP ++ ++L
Sbjct: 278 YGMAHEEVIYYVRDGNILACPENCPLELYNLMR---LCWSKLPADRPSFCSIHRIL 330
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAI-------- 611
+ ++E L ++ H ++K YG CS L+ EY + GSL L +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 612 ---------EEFNWTVRMNVIRSVANALSY-MHHDCFPPIVHRDISSKNVLLCLDYEARV 661
+ M + S A +S M + +VHRD++++N+L+ + ++
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 662 SDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
SDFG+++ + + S G ++A E ++ T + DV+SFGVL E++
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 518 DVKY--CIGIGGQGSVYKAKLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
D+K+ IG G G V KA++ + A+K+ +F E++ L +L
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLG 73
Query: 573 HR-SIVKFYGFCSHPRNSFLVYEYLERGSL------ATILSNDGAIEEFNWTVR------ 619
H +I+ G C H +L EY G+L + +L D A N T
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 620 -MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
++ VA + Y+ F +HRD++++N+L+ +Y A+++DFG+++
Sbjct: 134 LLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQEV 184
Query: 679 ELVGTFG-----YIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ T G ++A E + T DV+S+GVL E++
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V++ K GE +AVK F S + E + LRH +I+ F
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 71
Query: 583 CSHPRNSF----LVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHHD 636
+ ++ LV +Y E GSL L+ + TV + + S A+ L+++H +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHME 125
Query: 637 CF-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT------ELVGTFG 685
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T VGT
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 183
Query: 686 YIAPELV---YTMKVTE---KCDVYSFGVLALEVIK 715
Y+APE++ MK E + D+Y+ G++ E+ +
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 518 DVKY--CIGIGGQGSVYKAKLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
D+K+ IG G G V KA++ + A+K+ +F E++ L +L
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLG 83
Query: 573 HR-SIVKFYGFCSHPRNSFLVYEYLERGSL------ATILSNDGAIEEFNWTVR------ 619
H +I+ G C H +L EY G+L + +L D A N T
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 620 -MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
++ VA + Y+ F +HRD++++N+L+ +Y A+++DFG+++
Sbjct: 144 LLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQEV 194
Query: 679 ELVGTFG-----YIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ T G ++A E + T DV+S+GVL E++
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAI-----E 612
+ E E+ L ++H +IV++ + ++V +Y E G L ++ + +
Sbjct: 67 REESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 613 EFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672
+W V++ + AL ++H I+HRDI S+N+ L D ++ DFGIA+ L
Sbjct: 127 ILDWFVQICL------ALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
Query: 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDH 718
+GT Y++PE+ K D+++ G + E+ H
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 18/203 (8%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G G V+K + T +G LA K + M + E NEI + +L H ++++ Y
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV--IRSVANALSYMHHDCFP 639
+ LV EY++ G L + + E +N T + ++ + + +MH
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQ---M 206
Query: 640 PIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK 696
I+H D+ +N+ LC++ +A ++ DFG+A+ KP GT ++APE+V
Sbjct: 207 YILHLDLKPENI-LCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDF 264
Query: 697 VTEKCDVYSFGVLALEVIKGDHP 719
V+ D++S GV+A ++ G P
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V++ K GE +AVK F S + E + LRH +I+ F
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 65
Query: 583 CSHPRNSF----LVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHHD 636
+ ++ LV +Y E GSL L+ + TV + + S A+ L+++H +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHME 119
Query: 637 CF-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT------ELVGTFG 685
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T VGT
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 177
Query: 686 YIAPELV---YTMKVTE---KCDVYSFGVLALEVIK 715
Y+APE++ MK E + D+Y+ G++ E+ +
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V++ K GE +AVK F S + E + LRH +I+ F
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 68
Query: 583 CSHPRNSF----LVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHHD 636
+ ++ LV +Y E GSL L+ + TV + + S A+ L+++H +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHME 122
Query: 637 CF-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT------ELVGTFG 685
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T VGT
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 180
Query: 686 YIAPELV---YTMKVTE---KCDVYSFGVLALEVIK 715
Y+APE++ MK E + D+Y+ G++ E+ +
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 54 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 113
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 114 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 170
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 171 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V++ K GE +AVK F S + E + LRH +I+ F
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 66
Query: 583 CSHPRNSF----LVYEYLERGSLATILSNDGAIEEFNWTVR--MNVIRSVANALSYMHHD 636
+ ++ LV +Y E GSL L+ + TV + + S A+ L+++H +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHME 120
Query: 637 CF-----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT------ELVGTFG 685
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T VGT
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 178
Query: 686 YIAPELV---YTMKVTE---KCDVYSFGVLALEVIK 715
Y+APE++ MK E + D+Y+ G++ E+ +
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 567 TLTELRHRSIVKFYGFCSH-------PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
T+ E R S+ + F +H N F V EYL G L + + +F+ +
Sbjct: 64 TMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRA 120
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ L ++H IV+RD+ N+LL D +++DFG+ K +
Sbjct: 121 TFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX 177
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT YIAPE++ K D +SFGVL E++ G P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 180 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 520 KYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
+ +G G G VY + S ++ +A+K+ P E EI L+H++IV+
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQ 83
Query: 579 FYGFCSHPRNSFL--VYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
+ G S N F+ E + GSL+ +L S G +++ T+ + + L Y+H
Sbjct: 84 YLG--SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHD 140
Query: 636 DCFPPIVHRDISSKNVLLCLDYEA--RVSDFGIAKFLKPDSSNCTE-LVGTFGYIAPELV 692
+ IVHRDI NVL+ Y ++SDFG +K L + CTE GT Y+APE++
Sbjct: 141 N---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEII 195
Query: 693 YT--MKVTEKCDVYSFGVLALEVIKGDHP 719
+ D++S G +E+ G P
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 520 KYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
+ +G G G VY + S ++ +A+K+ P E EI L+H++IV+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQ 69
Query: 579 FYGFCSHPRNSFL--VYEYLERGSLATIL-SNDGAIEEFNWTVRMNVIRSVANALSYMHH 635
+ G S N F+ E + GSL+ +L S G +++ T+ + + L Y+H
Sbjct: 70 YLG--SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHD 126
Query: 636 DCFPPIVHRDISSKNVLLCLDYEA--RVSDFGIAKFLKPDSSNCTE-LVGTFGYIAPELV 692
+ IVHRDI NVL+ Y ++SDFG +K L + CTE GT Y+APE++
Sbjct: 127 N---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEII 181
Query: 693 YT--MKVTEKCDVYSFGVLALEVIKGDHP 719
+ D++S G +E+ G P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 538 SGEILAVKKFHSLWPCEMVPQPE--FVNEIKTLTELRHRSIVKFYGFCSHPRNSFL--VY 593
+GE++AVK + + PQ + EI L L H I+K+ G C + L V
Sbjct: 59 TGEMVAVKALKA----DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114
Query: 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL 653
EY+ GSL L + + + ++Y+H + +HRD++++NVLL
Sbjct: 115 EYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLL 167
Query: 654 CLDYEARVSDFGIAKFLKPDSSNCTELVG-----TFGYIAPELVYTMKVTEKCDVYSFGV 708
D ++ DFG+AK + P+ + F Y APE + K DV+SFGV
Sbjct: 168 DNDRLVKIGDFGLAKAV-PEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGV 225
Query: 709 LALEVI 714
E++
Sbjct: 226 TLYELL 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 48/280 (17%)
Query: 523 IGIGGQGSVYKAKLT-----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +G ++AVK+ P + Q +F EI+ L L IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 74
Query: 578 KFYGFCSHP-RNSF-LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR------SVANA 629
K+ G P R S LV EYL G L L A R++ R +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--------RLDASRLLLYSSQICKG 126
Query: 630 LSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG--- 685
+ Y+ C VHRD++++N+L+ + +++DFG+AK L D +V G
Sbjct: 127 MEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--YYVVREPGQSP 180
Query: 686 --YIAPELVYTMKVTEKCDVYSFGVLALEVI----KGDHPR----DFXXXXXXXXXXXXX 735
+ APE + + + DV+SFGV+ E+ K P
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRL 240
Query: 736 XXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
RLP PP + + E+ LC SP+ RP
Sbjct: 241 LELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRP 276
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+ E++ L +L H +I+K + + ++V E G L + E +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---R 125
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAKFLKPDSSNCT 678
+I+ V + ++YMH IVHRD+ +N+LL D + ++ DFG++ + ++
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMK 181
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ +GT YIAPE++ EKCDV+S GV+ ++ G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+ E++ L +L H +I+K + + ++V E G L + E +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AAR 125
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAKFLKPDSSNCT 678
+I+ V + ++YMH IVHRD+ +N+LL D + ++ DFG++ + ++
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMK 181
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ +GT YIAPE++ EKCDV+S GV+ ++ G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+ E++ L +L H +I+K + + ++V E G L + E +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AAR 125
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAKFLKPDSSNCT 678
+I+ V + ++YMH IVHRD+ +N+LL D + ++ DFG++ + ++
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMK 181
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ +GT YIAPE++ EKCDV+S GV+ ++ G P
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 523 IGIGGQGSVYKAKLT-----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +G ++AVK+ P + Q +F EI+ L L IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 75
Query: 578 KFYGFCSHP-RNSF-LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR------SVANA 629
K+ G P R S LV EYL G L L A R++ R +
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--------RLDASRLLLYSSQICKG 127
Query: 630 LSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG--- 685
+ Y+ C VHRD++++N+L+ + +++DFG+AK L D +V G
Sbjct: 128 MEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--YYVVREPGQSP 181
Query: 686 --YIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ APE + + + DV+SFGV+ E+
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
NEI L +++H +IV + +L+ + + G L + G E + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL 121
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLL-CLDYEARV--SDFGIAKFLKPDSSNCTE 679
I V +A+ Y+H IVHRD+ +N+L LD ++++ SDFG++K P S T
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST- 177
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVLA 710
GT GY+APE++ ++ D +S GV+A
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 523 IGIGGQGSVYKAKLT-----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +G ++AVK+ P + Q +F EI+ L L IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 87
Query: 578 KFYGFCSHP-RNSF-LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR------SVANA 629
K+ G P R S LV EYL G L L A R++ R +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--------RLDASRLLLYSSQICKG 139
Query: 630 LSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG--- 685
+ Y+ C VHRD++++N+L+ + +++DFG+AK L D +V G
Sbjct: 140 MEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--YYVVREPGQSP 193
Query: 686 --YIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ APE + + + DV+SFGV+ E+
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
NEI L +++H +IV + +L+ + + G L + G E + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL 121
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLL-CLDYEARV--SDFGIAKFLKPDSSNCTE 679
I V +A+ Y+H IVHRD+ +N+L LD ++++ SDFG++K P S T
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST- 177
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVLA 710
GT GY+APE++ ++ D +S GV+A
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 28/263 (10%)
Query: 523 IGIGGQGSVYKAKLT--SGEILAVKKFHSLWPCEMVPQPE----FVNEIKTLTELRHRSI 576
+G G G V + + SG+ ++V L P +++ QPE F+ E+ + L HR++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKP-DVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++ YG P +V E GSL L R V VA + Y+
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT---ELVGTFGYIAPELVY 693
F +HRD++++N+LL ++ DFG+ + L + + F + APE +
Sbjct: 141 RF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 694 TMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNV 752
T + D + FGV E+ G P + RLP P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGERLPRPEDCP 251
Query: 753 QDELISIVEVAFLCLNESPESRP 775
QD I V C PE RP
Sbjct: 252 QD----IYNVMVQCWAHKPEDRP 270
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SNDGAIE 612
EF+NE + E +V+ G S + + ++ E + RG L + L +N+ +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 613 EFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672
+ + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 673 DSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G +++PE + T DV+SFGV+ E+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 105/263 (39%), Gaps = 28/263 (10%)
Query: 523 IGIGGQGSVYKAKLT--SGEILAVKKFHSLWPCEMVPQPE----FVNEIKTLTELRHRSI 576
+G G G V + + SG+ ++V L P +++ QPE F+ E+ + L HR++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKP-DVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++ YG P +V E GSL L R V VA + Y+
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT---ELVGTFGYIAPELVY 693
F +HRD++++N+LL ++ DFG+ + L + + F + APE +
Sbjct: 131 RF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 694 TMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNV 752
T + D + FGV E+ G P + E RLP P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCP 241
Query: 753 QDELISIVEVAFLCLNESPESRP 775
QD I V C PE RP
Sbjct: 242 QD----IYNVMVQCWAHKPEDRP 260
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G+V+KAK + EI+A+K+ E VP + EI L EL+H++IV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641
+ LV+E+ ++ S +G ++ + + + + L + H +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSRN---V 122
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMKV-TE 699
+HRD+ +N+L+ + E ++++FG+A+ F P E+V T Y P++++ K+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYST 181
Query: 700 KCDVYSFGVLALEVIKGDHP 719
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELR 572
++ F+V+ +G G VY+ K +K ++L + + V EI L L
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQK-----GTQKPYALKVLKKTVDKKIVRTEIGVLLRLS 106
Query: 573 HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
H +I+K P LV E + G L + G E + + ++ + A++Y
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD---AADAVKQILEAVAY 163
Query: 633 MHHDCFPPIVHRDISSKNVLLCL---DYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAP 689
+H + IVHRD+ +N+L D +++DFG++K ++ T + GT GY AP
Sbjct: 164 LHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAP 219
Query: 690 ELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
E++ + D++S G++ ++ G P
Sbjct: 220 EILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 24/230 (10%)
Query: 554 EMVPQPE----FVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDG 609
+++ QPE F+ E+ + L HR++++ YG P +V E GSL L
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ 109
Query: 610 AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669
R V VA + Y+ F +HRD++++N+LL ++ DFG+ +
Sbjct: 110 GHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRA 164
Query: 670 LKPDSSNCT---ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXX 725
L + + F + APE + T + D + FGV E+ G P
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------ 218
Query: 726 XXXXXXXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
+ RLP P QD I V C PE RP
Sbjct: 219 WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 264
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G +V++ + +G++ A+K F+++ + P + E + L +L H++IVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNI--SFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 582 FCSH--PRNSFLVYEYLERGSLATIL---SNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
R+ L+ E+ GSL T+L SN + E + + V+R V ++++ +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---VLRDVVGGMNHLREN 131
Query: 637 CFPPIVHRDISSKNVLLCLDYEA----RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
IVHR+I N++ + + +++DFG A+ L+ D L GT Y+ P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMY 187
Query: 693 --------YTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ K D++S GV G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
NEI L +++H +IV + +L+ + + G L + G E + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL 121
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLL-CLDYEARV--SDFGIAKFLKPDSSNCTE 679
I V +A+ Y+H IVHRD+ +N+L LD ++++ SDFG++K P S T
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST- 177
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVLA 710
GT GY+APE++ ++ D +S GV+A
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
NEI L +++H +IV + +L+ + + G L + G E + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL 121
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLL-CLDYEARV--SDFGIAKFLKPDSSNCTE 679
I V +A+ Y+H IVHRD+ +N+L LD ++++ SDFG++K P S T
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST- 177
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVLA 710
GT GY+APE++ ++ D +S GV+A
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 36/211 (17%)
Query: 523 IGIGGQGSVYKAKLT-----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
+G G GSV + +G ++AVK+ P + Q +F EI+ L L IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 71
Query: 578 KFYGFCSHPRNS--FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR------SVANA 629
K+ G P LV EYL G L L A R++ R +
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--------RLDASRLLLYSSQICKG 123
Query: 630 LSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFG--- 685
+ Y+ C VHRD++++N+L+ + +++DFG+AK L D +V G
Sbjct: 124 MEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--XXVVREPGQSP 177
Query: 686 --YIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ APE + + + DV+SFGV+ E+
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 28/263 (10%)
Query: 523 IGIGGQGSVYKAKLT--SGEILAVKKFHSLWPCEMVPQPE----FVNEIKTLTELRHRSI 576
+G G G V + + SG+ ++V L P +++ QPE F+ E+ + L HR++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKP-DVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++ YG P +V E GSL L R V VA + Y+
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT---ELVGTFGYIAPELVY 693
F +HRD++++N+LL ++ DFG+ + L + + F + APE +
Sbjct: 131 RF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 694 TMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNV 752
T + D + FGV E+ G P + RLP P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGERLPRPEDCP 241
Query: 753 QDELISIVEVAFLCLNESPESRP 775
QD I V C PE RP
Sbjct: 242 QD----IYNVMVQCWAHKPEDRP 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 24/230 (10%)
Query: 554 EMVPQPE----FVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDG 609
+++ QPE F+ E+ + L HR++++ YG P +V E GSL L
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ 115
Query: 610 AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669
R V VA + Y+ F +HRD++++N+LL ++ DFG+ +
Sbjct: 116 GHFLLGTLSRYAV--QVAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRA 170
Query: 670 LKPDSSNCT---ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXX 725
L + + F + APE + T + D + FGV E+ G P
Sbjct: 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------ 224
Query: 726 XXXXXXXXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
+ RLP P QD I V C PE RP
Sbjct: 225 WIGLNGSQILHKIDKEGERLPRPEDCPQD----IYNVMVQCWAHKPEDRP 270
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQP-------EFVNEIKTLT 569
FD++ IG G +VYK T + W CE+ + F E + L
Sbjct: 30 FDIE--IGRGSFKTVYKGLDTETTVEVA------W-CELQDRKLTKSERQRFKEEAEXLK 80
Query: 570 ELRHRSIVKFY----GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
L+H +IV+FY + LV E G+L T L + V + R
Sbjct: 81 GLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR---FKVXKIKVLRSWCRQ 137
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVGTF 684
+ L ++H PPI+HRD+ N+ + ++ D G+A + +S ++GT
Sbjct: 138 ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTP 194
Query: 685 GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ APE Y K E DVY+FG LE ++P
Sbjct: 195 EFXAPEX-YEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L +N
Sbjct: 59 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN 118
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 119 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 175
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 176 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 56 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 115
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 116 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 172
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 173 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 518 DVKY--CIGIGGQGSVYKAKLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELR 572
D+K+ IG G G V KA++ + A+K+ +F E++ L +L
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLG 80
Query: 573 HR-SIVKFYGFCSHPRNSFLVYEYLERGSL------ATILSNDGAIEEFNWTVR------ 619
H +I+ G C H +L EY G+L + +L D A N T
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 620 -MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678
++ VA + Y+ F +HR+++++N+L+ +Y A+++DFG++ +
Sbjct: 141 LLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLS---RGQEVYVK 194
Query: 679 ELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ +G ++A E + T DV+S+GVL E++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+KA+ +G+ +A+KK E P + EIK L L+H ++V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 84
Query: 582 FC---SHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
C + P N +LV+++ E LA +LSN + +F + V++ + N L Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL----KPDSSNCTELVGTFGYIAP 689
H + I+HRD+ + NVL+ D +++DFG+A+ + V T Y P
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 690 ELV 692
EL+
Sbjct: 199 ELL 201
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 28/263 (10%)
Query: 523 IGIGGQGSVYKAKLT--SGEILAVKKFHSLWPCEMVPQPE----FVNEIKTLTELRHRSI 576
+G G G V + + SG+ ++V L P +++ QPE F+ E+ + L HR++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKP-DVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++ YG P +V E GSL L R V VA + Y+
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT---ELVGTFGYIAPELVY 693
F +HRD++++N+LL ++ DFG+ + L + + F + APE +
Sbjct: 135 RF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 694 TMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNV 752
T + D + FGV E+ G P + RLP P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP------WIGLNGSQILHKIDKEGERLPRPEDCP 245
Query: 753 QDELISIVEVAFLCLNESPESRP 775
QD I V C PE RP
Sbjct: 246 QD----IYNVMVQCWAHKPEDRP 264
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G +V++ + +G++ A+K F+++ + P + E + L +L H++IVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNI--SFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 582 FCSH--PRNSFLVYEYLERGSLATIL---SNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
R+ L+ E+ GSL T+L SN + E + + V+R V ++++ +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---VLRDVVGGMNHLREN 131
Query: 637 CFPPIVHRDISSKNVLLCLDYEA----RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
IVHR+I N++ + + +++DFG A+ L+ D L GT Y+ P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDMY 187
Query: 693 --------YTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ K D++S GV G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 105/263 (39%), Gaps = 28/263 (10%)
Query: 523 IGIGGQGSVYKAKLT--SGEILAVKKFHSLWPCEMVPQPE----FVNEIKTLTELRHRSI 576
+G G G V + + SG+ ++V L P +++ QPE F+ E+ + L HR++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVA-VKCLKP-DVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
++ YG P +V E GSL L R V VA + Y+
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT---ELVGTFGYIAPELVY 693
F +HRD++++N+LL ++ DFG+ + L + + F + APE +
Sbjct: 131 RF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 694 TMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXXXEILDPRLPTPPQNV 752
T + D + FGV E+ G P + E RLP P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCP 241
Query: 753 QDELISIVEVAFLCLNESPESRP 775
QD I V C PE RP
Sbjct: 242 QD----IYNVMVQCWAHKPEDRP 260
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+KA+ +G+ +A+KK E P + EIK L L+H ++V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 84
Query: 582 FC---SHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
C + P N +LV+++ E LA +LSN + +F + V++ + N L Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL----KPDSSNCTELVGTFGYIAP 689
H + I+HRD+ + NVL+ D +++DFG+A+ + V T Y P
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 690 ELV 692
EL+
Sbjct: 199 ELL 201
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 38/229 (16%)
Query: 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
G + ++V AT G+G + +V K +AVK S + +
Sbjct: 55 GAGAFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKST--AHADEKEALM 97
Query: 563 NEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSND------------- 608
+E+K ++ L +H +IV G C+H ++ EY G L L
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 609 GAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
E+ + ++ VA ++++ +C +HRD++++NVLL + A++ DFG+A
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ + DS+ + ++APE ++ T + DV+S+G+L E+
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+KA+ +G+ +A+KK E P + EIK L L+H ++V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 84
Query: 582 FC---SHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
C + P N +LV+++ E LA +LSN + +F + V++ + N L Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL----KPDSSNCTELVGTFGYIAP 689
H + I+HRD+ + NVL+ D +++DFG+A+ + V T Y P
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 690 ELV 692
EL+
Sbjct: 199 ELL 201
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G G V+KA+ +G+ +A+KK E P + EIK L L+H ++V
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 83
Query: 582 FC---SHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
C + P N +LV+++ E LA +LSN + +F + V++ + N L Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK----PDSSNCTELVGTFGYIAP 689
H + I+HRD+ + NVL+ D +++DFG+A+ + V T Y P
Sbjct: 141 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 690 ELV 692
EL+
Sbjct: 198 ELL 200
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 180 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++L H++I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKLNHQNI 110
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 171 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 225
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++L H++I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKLNHQNI 96
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 157 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 211
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SNDGAIE 612
EF+NE + E +V+ G S + + ++ E + RG L + L N+ +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 613 EFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672
+ + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 673 DSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G +++PE + T DV+SFGV+ E+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 91 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 150
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 151 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 207
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 208 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 119
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N ++ D+ ++ DFG+
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 177 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 538 SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH--PRNSFLVYEY 595
+GE++AVK + C + + EI L L H I+K+ G C ++ LV EY
Sbjct: 42 TGEMVAVKALKA--DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
+ GSL L + + + ++Y+H + +HR+++++NVLL
Sbjct: 100 VPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLDN 152
Query: 656 DYEARVSDFGIAKFLKPDSSNCTELVG-----TFGYIAPELVYTMKVTEKCDVYSFGVLA 710
D ++ DFG+AK + P+ + F Y APE + K DV+SFGV
Sbjct: 153 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTL 210
Query: 711 LEVI 714
E++
Sbjct: 211 YELL 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 527 GQGSVYKAKL----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+GS K KL T+G+ +A+K + + Q EI L LRH I+K Y
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+V EY I+ D E+ + + +A+ Y H IV
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 129
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +N+LL +++DFG++ + D + G+ Y APE++ + +
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 702 DVYSFGVL 709
DV+S GV+
Sbjct: 189 DVWSCGVI 196
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 527 GQGSVYKAKL----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+GS K KL T+G+ +A+K + + Q EI L LRH I+K Y
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+V EY I+ D E+ + + +A+ Y H IV
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 134
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +N+LL +++DFG++ + D + G+ Y APE++ + +
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 702 DVYSFGVL 709
DV+S GV+
Sbjct: 194 DVWSCGVI 201
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 515 NGFDVKYCIGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ +D+ +G G G V++ + +G A K + P E + EI+T++ LRH
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAK--FVMTPHESDKE-TVRKEIQTMSVLRH 107
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSL-------ATILSNDGAIEEFNWTVRMNVIRSV 626
++V + ++YE++ G L +S D A+E +R V
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE---------YMRQV 158
Query: 627 ANALSYMHHDCFPPIVHRDISSKNVLLCLDY--EARVSDFGIAKFLKPDSSNCTELVGTF 684
L +MH + + VH D+ +N++ E ++ DFG+ L P S GT
Sbjct: 159 CKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTTGTA 214
Query: 685 GYIAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
+ APE+ V D++S GVL+ ++ G
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + R++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 527 GQGSVYKAKL----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+GS K KL T+G+ +A+K + + Q EI L LRH I+K Y
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+V EY I+ D E+ + + +A+ Y H IV
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 135
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +N+LL +++DFG++ + D + G+ Y APE++ + +
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 702 DVYSFGVL 709
DV+S GV+
Sbjct: 195 DVWSCGVI 202
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 538 SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH--PRNSFLVYEY 595
+GE++AVK + C + + EI L L H I+K+ G C ++ LV EY
Sbjct: 42 TGEMVAVKALKA--DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
+ GSL L + + + ++Y+H + +HR+++++NVLL
Sbjct: 100 VPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLDN 152
Query: 656 DYEARVSDFGIAKFLKPDSSNCTELVG-----TFGYIAPELVYTMKVTEKCDVYSFGVLA 710
D ++ DFG+AK + P+ + F Y APE + K DV+SFGV
Sbjct: 153 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTL 210
Query: 711 LEVI 714
E++
Sbjct: 211 YELL 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 527 GQGSVYKAKL----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G+GS K KL T+G+ +A+K + + Q EI L LRH I+K Y
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642
+V EY I+ D E+ + + +A+ Y H IV
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---KIV 125
Query: 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKC 701
HRD+ +N+LL +++DFG++ + D + G+ Y APE++ + +
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 702 DVYSFGVL 709
DV+S GV+
Sbjct: 185 DVWSCGVI 192
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
NEI L +++H +IV + +LV + + G L + G E + ++ V
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---V 111
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSDFGIAKFLKPD--SSNC 677
I+ V +A+ Y+H + IVHRD+ +N+L E ++DFG++K + S+ C
Sbjct: 112 IQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC 168
Query: 678 TELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT GY+APE++ ++ D +S GV+ ++ G P
Sbjct: 169 ----GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 517 FDVKYCIGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
+D+ +G G G V++ + +G A K + P E + EI+T++ LRH +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAK--FVMTPHESDKE-TVRKEIQTMSVLRHPT 215
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSL-------ATILSNDGAIEEFNWTVRMNVIRSVAN 628
+V + ++YE++ G L +S D A+E +R V
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE---------YMRQVCK 266
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLLCLDY--EARVSDFGIAKFLKPDSSNCTELVGTFGY 686
L +MH + + VH D+ +N++ E ++ DFG+ L P S GT +
Sbjct: 267 GLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTTGTAEF 322
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
APE+ V D++S GVL+ ++ G
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRH 573
++V IG G G V + S + K S EM+ + + F E +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFANS 133
Query: 574 RSIVK-FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+V+ FY F R ++V EY+ G L ++SN E++ V+ AL
Sbjct: 134 PWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDA 188
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA-KFLKPDSSNCTELVGTFGYIAPEL 691
+H F +HRD+ N+LL +++DFG K K C VGT YI+PE+
Sbjct: 189 IHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 692 VYTMK----VTEKCDVYSFGVLALEVIKGDHP 719
+ + +CD +S GV E++ GD P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRH 573
++V IG G G V + S + K S EM+ + + F E +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFANS 128
Query: 574 RSIVK-FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+V+ FY F R ++V EY+ G L ++SN E++ V+ AL
Sbjct: 129 PWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDA 183
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA-KFLKPDSSNCTELVGTFGYIAPEL 691
+H F +HRD+ N+LL +++DFG K K C VGT YI+PE+
Sbjct: 184 IHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 692 VYTMK----VTEKCDVYSFGVLALEVIKGDHP 719
+ + +CD +S GV E++ GD P
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 522 CIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
CIG G G V++ S E +A+K + + + +F+ E T+ + H IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH 635
K G + +++ E G L + L + +F+ + ++ + ++ AL+Y+
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVY 693
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE +
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESIN 185
Query: 694 TMKVTEKCDVYSFGVLALEVI 714
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDS--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ + N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 89/218 (40%), Gaps = 18/218 (8%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS-VANALS 631
+ Y F +H R F V EY G L LS + E R + + +AL
Sbjct: 65 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVSALE 119
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE+
Sbjct: 120 YLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
+ D + GV+ E++ G DH R F
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPE---FVNEIKTLTELRH 573
++V IG G G V + S + K S EM+ + + F E +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFANS 133
Query: 574 RSIVK-FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+V+ FY F R ++V EY+ G L ++SN E++ V+ AL
Sbjct: 134 PWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDA 188
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA-KFLKPDSSNCTELVGTFGYIAPEL 691
+H F +HRD+ N+LL +++DFG K K C VGT YI+PE+
Sbjct: 189 IHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 692 VYTMK----VTEKCDVYSFGVLALEVIKGDHP 719
+ + +CD +S GV E++ GD P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 87/217 (40%), Gaps = 16/217 (7%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+ Y F +H R F V EY G L LS + E + +AL Y
Sbjct: 65 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTEERARFYGA---EIVSALEY 120
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE++
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 693 YTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
D + GV+ E++ G DH R F
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKF---HSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
+G G +VYKA+ + +I+A+KK H + + + + EIK L EL H +I+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTA-LREIKLLQELSHPNIIG 76
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
H N LV++++E I N + + M + L Y+H
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM---TLQGLEYLHQHW- 132
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPELVYTMKV 697
I+HRD+ N+LL + +++DFG+AK F P+ + ++V T Y APEL++ ++
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARM 189
Query: 698 TE-KCDVYSFGVLALEVI 714
D+++ G + E++
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 87
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 148 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 202
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 89/218 (40%), Gaps = 18/218 (8%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS-VANALS 631
+ Y F +H R F V EY G L LS + E R + + +AL
Sbjct: 65 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVSALE 119
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE+
Sbjct: 120 YLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
+ D + GV+ E++ G DH R F
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 27/205 (13%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G G VYKA T + E +A+K+ E VP + E+ L EL+HR+I++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA-IREVSLLKELQHRNIIELKS 100
Query: 582 FCSHPRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRS----VANALSYMH-H 635
H L++EY E ND + N V M VI+S + N +++ H
Sbjct: 101 VIHHNHRLHLIFEYAE---------NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 636 DCFPPIVHRDISSKNVLLCLDYEA-----RVSDFGIAKFLKPDSSNCTELVGTFGYIAPE 690
C +HRD+ +N+LL + + ++ DFG+A+ T + T Y PE
Sbjct: 152 RC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE 207
Query: 691 -LVYTMKVTEKCDVYSFGVLALEVI 714
L+ + + D++S + E++
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 555 MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL-------SN 607
M + EF+NE + E +V+ G S + + ++ E + RG L + L N
Sbjct: 56 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 115
Query: 608 DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667
+ + + + + + +A+ ++Y++ + F VHRD++++N + D+ ++ DFG+
Sbjct: 116 NPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMT 172
Query: 668 KFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ + G +++PE + T DV+SFGV+ E+
Sbjct: 173 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
E L ++ H +VK + +L+ ++L G L T LS + E + +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YL 136
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT 683
+A L ++H I++RD+ +N+LL + +++DFG++K GT
Sbjct: 137 AELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGT 193
Query: 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
Y+APE+V + D +S+GVL E++ G P
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 87/217 (40%), Gaps = 16/217 (7%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+ Y F +H R F V EY G L LS + E + +AL Y
Sbjct: 65 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTEERARFYGA---EIVSALEY 120
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE++
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 693 YTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
D + GV+ E++ G DH R F
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 89/218 (40%), Gaps = 18/218 (8%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS-VANALS 631
+ Y F +H R F V EY G L LS + E R + + +AL
Sbjct: 70 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVSALE 124
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE+
Sbjct: 125 YLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
+ D + GV+ E++ G DH R F
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 219
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 110
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 171 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 225
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 557 PQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS--FLVYEYLERGSLATI-----LSNDG 609
P + EI L +L H ++VK P ++V+E + +G + + LS D
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 610 AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669
A F + + + Y+H + I+HRDI N+L+ D +++DFG++
Sbjct: 139 ARFYF---------QDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 670 LKPDSSNCTELVGTFGYIAPE-LVYTMKV--TEKCDVYSFGV 708
K + + VGT ++APE L T K+ + DV++ GV
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 228
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 89/218 (40%), Gaps = 18/218 (8%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS-VANALS 631
+ Y F +H R F V EY G L LS + E R + + +AL
Sbjct: 65 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIVSALE 119
Query: 632 YMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
Y+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE+
Sbjct: 120 YLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
+ D + GV+ E++ G DH R F
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 87/217 (40%), Gaps = 16/217 (7%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N FD +G G G V + +G A+K V E + L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 574 RSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+ Y F +H R F V EY G L LS + E + +AL Y
Sbjct: 68 PFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTEERARFYGA---EIVSALEY 123
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+H +V+RDI +N++L D +++DFG+ K D + GT Y+APE++
Sbjct: 124 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 180
Query: 693 YTMKVTEKCDVYSFGVLALEVIKG-------DHPRDF 722
D + GV+ E++ G DH R F
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 95
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 156 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 210
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 96
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 157 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 211
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 95
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 156 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 210
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 112
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 173 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 227
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 45/236 (19%)
Query: 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
G + ++V AT G+G + +V K +AVK S + +
Sbjct: 40 GAGAFGKVVEAT-------AFGLGKEDAVLK--------VAVKMLKST--AHADEKEALM 82
Query: 563 NEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSN-------------- 607
+E+K ++ L +H +IV G C+H ++ EY G L L
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 608 --DGAIEEFNWTVRMNVI----RSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEAR 660
+G +E + + + VA ++++ +C +HRD++++NVLL + A+
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAK 198
Query: 661 VSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ DFG+A+ + DS+ + ++APE ++ T + DV+S+G+L E+
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 102
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 163 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 217
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 34/244 (13%)
Query: 481 PSSENRVNCVTNQGLLSILTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGE 540
P++EN + QG + T + +I E I ++ CIG G G V++ S E
Sbjct: 15 PTTEN----LYFQGAMGSSTRDYEIQRERI-------ELGRCIGEGQFGDVHQGIYMSPE 63
Query: 541 --ILAVKKFHSLWPCEMVP----QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYE 594
LAV ++ C+ + +F+ E T+ + H IVK G + +++ E
Sbjct: 64 NPALAV----AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIME 118
Query: 595 YLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHHDCFPPIVHRDISSKNVL 652
G L + L + +++ + ++ + ++ AL+Y+ F VHRDI+++NVL
Sbjct: 119 LCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKRF---VHRDIAARNVL 171
Query: 653 LCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLA 710
+ + ++ DFG++++++ DS+ G ++APE + + T DV+ FGV
Sbjct: 172 VSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 230
Query: 711 LEVI 714
E++
Sbjct: 231 WEIL 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 29/250 (11%)
Query: 477 RREGPSSENRVNCVTNQGLLSILTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAK- 535
+R GP +E+ N+G+L LT + K + E + + +G G G V++ K
Sbjct: 44 QRLGPETED------NEGVL--LTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKD 95
Query: 536 LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEY 595
+G AVKK E+ V E+ L IV YG + E
Sbjct: 96 KQTGFQCAVKKVR----LEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 147
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
LE GSL ++ G + E + + L Y+H I+H D+ + NVLL
Sbjct: 148 LEGGSLGQLIKQMGCLPEDR---ALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSS 201
Query: 656 D-YEARVSDFGIAKFLKPDSSNCTELVGTF-----GYIAPELVYTMKVTEKCDVYSFGVL 709
D A + DFG A L+PD + L G + ++APE+V K D++S +
Sbjct: 202 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 261
Query: 710 ALEVIKGDHP 719
L ++ G HP
Sbjct: 262 MLHMLNGCHP 271
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 247
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 248 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 26/175 (14%)
Query: 563 NEIKTLTELR-HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
E++TL + + +++I++ F +LV+E L+ GS IL++ + FN
Sbjct: 59 REVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASR 115
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE----ARVSDFGIAKFLKPDSSNC 677
V+R VA AL ++H I HRD+ +N+ LC E ++ DF + +K ++S C
Sbjct: 116 VVRDVAAALDFLHT---KGIAHRDLKPENI-LCESPEKVSPVKICDFDLGSGMKLNNS-C 170
Query: 678 TELV--------GTFGYIAPEL--VYTMKVT---EKCDVYSFGVLALEVIKGDHP 719
T + G+ Y+APE+ V+T + T ++CD++S GV+ ++ G P
Sbjct: 171 TPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 96
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 157 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML--PVK 211
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADF 188
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 189 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 29/250 (11%)
Query: 477 RREGPSSENRVNCVTNQGLLSILTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAK- 535
+R GP +E+ N+G+L LT + K + E + + +G G G V++ K
Sbjct: 28 QRLGPETED------NEGVL--LTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKD 79
Query: 536 LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEY 595
+G AVKK E+ V E+ L IV YG + E
Sbjct: 80 KQTGFQCAVKKVR----LEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
LE GSL ++ G + E + + L Y+H I+H D+ + NVLL
Sbjct: 132 LEGGSLGQLIKQMGCLPEDR---ALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSS 185
Query: 656 D-YEARVSDFGIAKFLKPDSSNCTELVGTF-----GYIAPELVYTMKVTEKCDVYSFGVL 709
D A + DFG A L+PD + L G + ++APE+V K D++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 710 ALEVIKGDHP 719
L ++ G HP
Sbjct: 246 MLHMLNGCHP 255
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 190
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 191 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 57 NPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSAS 116
NP K V +I L+S+ TLDL+ ++ P + L+NL ++YL N ++ +
Sbjct: 101 NPLKNVSAI--------AGLQSIKTLDLTSTQITDVTPLA--GLSNLQVLYLDLNQIT-N 149
Query: 117 IPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLF 176
I P+ G L L +L + NQ++ P L NLS L L N +S P + +L +L
Sbjct: 150 ISPLAG-LTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLI 204
Query: 177 YLHLSSNQLSGSIPISLGNLSNLVVLHL 204
+HL NQ+S P L NLSNL ++ L
Sbjct: 205 EVHLKDNQISDVSP--LANLSNLFIVTL 230
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 236
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 122
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 183 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 237
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 477 RREGPSSENRVNCVTNQGLLSILTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAK- 535
+R GP +E+ N+G+L LT + K + E + + +G G G V++ K
Sbjct: 42 QRLGPETED------NEGVL--LTEKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKD 93
Query: 536 LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEY 595
+G AVKK + V E+ L IV YG + E
Sbjct: 94 KQTGFQCAVKKVRL--------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 145
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
LE GSL ++ G + E + + L Y+H I+H D+ + NVLL
Sbjct: 146 LEGGSLGQLIKQMGCLPEDR---ALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSS 199
Query: 656 D-YEARVSDFGIAKFLKPDSSNCTELVGTF-----GYIAPELVYTMKVTEKCDVYSFGVL 709
D A + DFG A L+PD + L G + ++APE+V K D++S +
Sbjct: 200 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 259
Query: 710 ALEVIKGDHP 719
L ++ G HP
Sbjct: 260 MLHMLNGCHP 269
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 193
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 194 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 187
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 188 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPE---FVN 563
+E+ + F++ IG G V K+ +G++ A+K + W +M+ + E F
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK-W--DMLKRGEVSCFRE 110
Query: 564 EIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVI 623
E L R I + + +LV EY G L T+LS G E + +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYL 168
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS-NCTELVG 682
+ A+ +H + VHRDI N+LL R++DFG L+ D + VG
Sbjct: 169 AEIVMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 683 TFGYIAPELVYTMKVTE-------KCDVYSFGVLALEVIKGDHP 719
T Y++PE++ + +CD ++ GV A E+ G P
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 12/164 (7%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
E+ L IV YG + E LE GSL ++ G + E +
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR---ALY 189
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD-YEARVSDFGIAKFLKPDSSNCTEL 680
+ L Y+H I+H D+ + NVLL D A + DFG A L+PD + L
Sbjct: 190 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 681 VGTF-----GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
G + ++APE+V K DV+S + L ++ G HP
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 184
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 185 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEF----VNEIKTL 568
++ F +K +G G G V A +GEI+A+KK E +P F + EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI------EPFDKPLFALRTLREIKIL 63
Query: 569 TELRHRSIVKFYGFCSHPR-----NSFLVYEYLERGSLATILS----NDGAIEEFNWTVR 619
+H +I+ + P N + + L + L ++S +D I+ F
Sbjct: 64 KHFKHENIITIFNI-QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF----- 117
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--- 676
I A+ +H ++HRD+ N+L+ + + +V DFG+A+ + +++
Sbjct: 118 ---IYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 677 -------CTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEV 713
TE V T Y APE++ T K + DV+S G + E+
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 12 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 68
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 69 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 126 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTG 182
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 180
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 181 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 522 CIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
CIG G G V++ S E +A+K + + + +F+ E T+ + H IV
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 454
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH 635
K G + +++ E G L + L + +F+ + ++ + ++ AL+Y+
Sbjct: 455 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVY 693
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE +
Sbjct: 510 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 694 TMKVTEKCDVYSFGVLALEVI 714
+ T DV+ FGV E++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ ++E++ + + +H++I+ G C+ +++ EY +G+L L
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
+ E+ + ++ VA + Y+ +HRD++++NVL+ D +++DFG
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 188
Query: 666 IAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+A+ + G ++APE ++ T + DV+SFGVL E+
Sbjct: 189 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEF----VNEIKTL 568
++ F +K +G G G V A +GEI+A+KK E +P F + EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI------EPFDKPLFALRTLREIKIL 63
Query: 569 TELRHRSIVKFYGFCSHPR-----NSFLVYEYLERGSLATILS----NDGAIEEFNWTVR 619
+H +I+ + P N + + L + L ++S +D I+ F
Sbjct: 64 KHFKHENIITIFNI-QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF----- 117
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--- 676
I A+ +H ++HRD+ N+L+ + + +V DFG+A+ + +++
Sbjct: 118 ---IYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 677 -------CTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEV 713
TE V T Y APE++ T K + DV+S G + E+
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 522 CIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
CIG G G V++ S E +A+K + + + +F+ E T+ + H IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH 635
K G + +++ E G L + L + +F+ + ++ + ++ AL+Y+
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVY 693
F VHRDI+++NVL+ ++ DFG++++++ DS+ G ++APE +
Sbjct: 130 KRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 694 TMKVTEKCDVYSFGVLALEVI 714
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 12 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 68
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 69 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 126 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 182
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 522 CIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
CIG G G V++ S E +A+K + + + +F+ E T+ + H IV
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 454
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH 635
K G + +++ E G L + L + +F+ + ++ + ++ AL+Y+
Sbjct: 455 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVY 693
F VHRDI+++NVL+ ++ DFG++++++ DS+ G ++APE +
Sbjct: 510 KRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 694 TMKVTEKCDVYSFGVLALEVI 714
+ T DV+ FGV E++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 12 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 68
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 69 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 126 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 182
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKAK--LTSGEILAVKKFHSLWPCEMVPQPEF--VNEI 565
+ RA ++ IG G G V+KA+ G +A+K+ E +P V +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+ L H ++V+ + C+ R LV+E++++ L T L T++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK- 123
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+++ + L ++H +VHRD+ +N+L+ + +++DFG+A+ + T +
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSV 179
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
V T Y APE++ D++S G + E+ +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 136
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKP----DSSNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + C L
Sbjct: 197 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML--PVK 251
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 16 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 72
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 73 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 130 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 186
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V A++ +G++ AVK +++ Q + V T+TE R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKK----DVILQDDDVE--CTMTEKRI 76
Query: 574 RSIVKFYGFCSH-------PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSV 626
S+ + + F + P F V E++ G L + +E +
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF---YAAEI 133
Query: 627 ANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGY 686
+AL ++H I++RD+ NVLL + +++DFG+ K + GT Y
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
IAPE++ M D ++ GVL E++ G P
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 538 SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH--PRNSFLVYEY 595
+GE++AVK C + + EI+ L L H IVK+ G C ++ LV EY
Sbjct: 37 TGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
+ GSL L + + + ++Y+H + +HR ++++NVLL
Sbjct: 95 VPLGSLRDYLPRHCV----GLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDN 147
Query: 656 DYEARVSDFGIAKFLKPDSSNCTELVG-----TFGYIAPELVYTMKVTEKCDVYSFGVLA 710
D ++ DFG+AK + P+ + F Y APE + K DV+SFGV
Sbjct: 148 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTL 205
Query: 711 LEVI 714
E++
Sbjct: 206 YELL 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK + C + +F+ E +++ H++I
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNI 113
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKP----DSSNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + C L
Sbjct: 174 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML--PVK 228
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 517 FDVKYCIGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
+D+ +G G G V++ + +G + K ++ +P + NEI + +L H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHPK 109
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
++ + L+ E+L G L I + D + E +N +R L +MH
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE---AEVINYMRQACEGLKHMH 166
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691
IVH DI +N+ +C +A ++ DFG+A L PD T + APE+
Sbjct: 167 EHS---IVHLDIKPENI-MCETKKASSVKIIDFGLATKLNPDEI-VKVTTATAEFAAPEI 221
Query: 692 VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V V D+++ GVL ++ G P
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 522 CIGIGGQGSVYKAKLTSGE--ILAVKKFHSLWPCEMVP----QPEFVNEIKTLTELRHRS 575
CIG G G V++ S E LAV ++ C+ + +F+ E T+ + H
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAV----AIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYM 633
IVK G + +++ E G L + L + +++ + ++ + ++ AL+Y+
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL 127
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPEL 691
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE
Sbjct: 128 ESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPES 183
Query: 692 VYTMKVTEKCDVYSFGVLALEVI 714
+ + T DV+ FGV E++
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 32 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 88
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 89 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 145
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 146 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 202
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 14 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 70
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 71 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 128 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 184
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 538 SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH--PRNSFLVYEY 595
+GE++AVK C + + EI+ L L H IVK+ G C ++ LV EY
Sbjct: 36 TGEMVAVKALKE--GCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 596 LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655
+ GSL L + + + ++Y+H + +HR ++++NVLL
Sbjct: 94 VPLGSLRDYLPRHCV----GLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDN 146
Query: 656 DYEARVSDFGIAKFLKPDSSNCTELVG-----TFGYIAPELVYTMKVTEKCDVYSFGVLA 710
D ++ DFG+AK + P+ + F Y APE + K DV+SFGV
Sbjct: 147 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTL 204
Query: 711 LEVI 714
E++
Sbjct: 205 YELL 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 20 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 76
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 77 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 133
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 134 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 190
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 191 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 12 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 68
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 69 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 126 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 182
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 12 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 68
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 69 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 126 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 182
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
E+ L IV YG + E LE GSL ++ G + E +
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR---ALY 170
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD-YEARVSDFGIAKFLKPDSSNCTEL 680
+ L Y+H I+H D+ + NVLL D A + DFG A L+PD L
Sbjct: 171 YLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 681 VGTF-----GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
G + ++APE+V K DV+S + L ++ G HP
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 522 CIGIGGQGSVYKAKLTSGE--ILAVKKFHSLWPCEMVP----QPEFVNEIKTLTELRHRS 575
CIG G G V++ S E LAV ++ C+ + +F+ E T+ + H
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAV----AIKTCKNCTSDSVREKFLQEALTMRQFDHPH 75
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYM 633
IVK G + +++ E G L + L + +++ + ++ + ++ AL+Y+
Sbjct: 76 IVKLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL 130
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPEL 691
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE
Sbjct: 131 ESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPES 186
Query: 692 VYTMKVTEKCDVYSFGVLALEVI 714
+ + T DV+ FGV E++
Sbjct: 187 INFRRFTSASDVWMFGVCMWEIL 209
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 22/233 (9%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKA------KLTSGEILAVKKFHSLWP 552
LT + + +Y + +R + + + +G G G V A K + I++ +KF
Sbjct: 135 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 192
Query: 553 CEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIE 612
E P EI+ L +L H I+K F + ++V E +E G L + + ++
Sbjct: 193 READPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLK 251
Query: 613 EFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKF 669
E T ++ + + A+ Y+H + I+HRD+ +NVLL E +++DFG +K
Sbjct: 252 EA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 305
Query: 670 LKPDSSNCTELVGTFGYIAPEL---VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
L ++S L GT Y+APE+ V T D +S GV+ + G P
Sbjct: 306 L-GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 522 CIGIGGQGSVYKAKLTSGE--ILAVKKFHSLWPCEMVP----QPEFVNEIKTLTELRHRS 575
CIG G G V++ S E LAV ++ C+ + +F+ E T+ + H
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAV----AIKTCKNCTSDSVREKFLQEALTMRQFDHPH 77
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYM 633
IVK G + +++ E G L + L + +++ + ++ + ++ AL+Y+
Sbjct: 78 IVKLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL 132
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPEL 691
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE
Sbjct: 133 ESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPES 188
Query: 692 VYTMKVTEKCDVYSFGVLALEVI 714
+ + T DV+ FGV E++
Sbjct: 189 INFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 522 CIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV 577
CIG G G V++ S E +A+K + + + +F+ E T+ + H IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 578 KFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH 635
K G + +++ E G L + L + +++ + ++ + ++ AL+Y+
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 636 DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVY 693
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE +
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 694 TMKVTEKCDVYSFGVLALEVI 714
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 14 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 70
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 71 ---LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 128 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTG 184
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 522 CIGIGGQGSVYKAKLTSGE--ILAVKKFHSLWPCEMVP----QPEFVNEIKTLTELRHRS 575
CIG G G V++ S E LAV ++ C+ + +F+ E T+ + H
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAV----AIKTCKNCTSDSVREKFLQEALTMRQFDHPH 69
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYM 633
IVK G + +++ E G L + L + +++ + ++ + ++ AL+Y+
Sbjct: 70 IVKLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL 124
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPEL 691
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE
Sbjct: 125 ESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPES 180
Query: 692 VYTMKVTEKCDVYSFGVLALEVI 714
+ + T DV+ FGV E++
Sbjct: 181 INFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 522 CIGIGGQGSVYKAKLTSGE--ILAVKKFHSLWPCEMVP----QPEFVNEIKTLTELRHRS 575
CIG G G V++ S E LAV ++ C+ + +F+ E T+ + H
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAV----AIKTCKNCTSDSVREKFLQEALTMRQFDHPH 74
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYM 633
IVK G + +++ E G L + L + +++ + ++ + ++ AL+Y+
Sbjct: 75 IVKLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYL 129
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPEL 691
F VHRDI+++NVL+ + ++ DFG++++++ DS+ G ++APE
Sbjct: 130 ESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPES 185
Query: 692 VYTMKVTEKCDVYSFGVLALEVI 714
+ + T DV+ FGV E++
Sbjct: 186 INFRRFTSASDVWMFGVCMWEIL 208
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 10 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 66
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 67 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 124 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 180
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 181 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKAK--LTSGEILAVKKFHSLWPCEMVPQPEF--VNEI 565
+ RA ++ IG G G V+KA+ G +A+K+ E +P V +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+ L H ++V+ + C+ R LV+E++++ L T L T++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK- 123
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+++ + L ++H +VHRD+ +N+L+ + +++DFG+A+ + T +
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSV 179
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
V T Y APE++ D++S G + E+ +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKAK--LTSGEILAVKKFHSLWPCEMVPQPEF--VNEI 565
+ RA ++ IG G G V+KA+ G +A+K+ E +P V +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 566 KTLTELRHRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+ L H ++V+ + C+ R LV+E++++ L T L T++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK- 123
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+++ + L ++H +VHRD+ +N+L+ + +++DFG+A+ + T +
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSV 179
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK 715
V T Y APE++ D++S G + E+ +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
LYE+I + V+ C+ + G Y AK+ + + L+ + L E
Sbjct: 8 LYEDIGKGAFSV-VRRCVKLC-TGHEYAAKIINTKKLSARDHQKL-----------EREA 54
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ L+H +IV+ + S +LV++ + G L + A E ++ + I+
Sbjct: 55 RICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQ 111
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCTELVG 682
+ A+ + H +VHRD+ +N+LL C +++DFG+A ++ D G
Sbjct: 112 ILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVL 709
T GY++PE++ + D+++ GV+
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVI 195
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 562 VNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL--------------S 606
++E+K +T+L H +IV G C+ +L++EY G L L
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 607 NDGAIEEFNWTVRMNVIR---------SVANALSYMHHDCFPPIVHRDISSKNVLLCLDY 657
N +EE +NV+ VA + ++ F VHRD++++NVL+
Sbjct: 156 NQKRLEE---EEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGK 209
Query: 658 EARVSDFGIAKFLKPDSSNCTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
++ DFG+A+ + DS+ ++APE ++ T K DV+S+G+L E+
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 10 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 66
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 67 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 124 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 180
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 181 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 22/233 (9%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKA------KLTSGEILAVKKFHSLWP 552
LT + + +Y + +R + + + +G G G V A K + I++ +KF
Sbjct: 121 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 178
Query: 553 CEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIE 612
E P EI+ L +L H I+K F + ++V E +E G L + + ++
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLK 237
Query: 613 EFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKF 669
E T ++ + + A+ Y+H + I+HRD+ +NVLL E +++DFG +K
Sbjct: 238 EA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291
Query: 670 LKPDSSNCTELVGTFGYIAPEL---VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
L ++S L GT Y+APE+ V T D +S GV+ + G P
Sbjct: 292 LG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 14 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 70
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 71 ---LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 128 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 184
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 17 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 73
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 74 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 131 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 187
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 188 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 18 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 74
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 75 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 131
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 132 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 188
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 189 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 9 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 65
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 66 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 122
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 123 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 179
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 180 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 16 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 72
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 73 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 130 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEF----VNEIKTL 568
++ F +K +G G G V A +GEI+A+KK E +P F + EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI------EPFDKPLFALRTLREIKIL 63
Query: 569 TELRHRSIVKFYGFCSHPR-----NSFLVYEYLERGSLATILS----NDGAIEEFNWTVR 619
+H +I+ + P N + + L + L ++S +D I+ F
Sbjct: 64 KHFKHENIITIFNI-QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF----- 117
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--- 676
I A+ +H ++HRD+ N+L+ + + +V DFG+A+ + +++
Sbjct: 118 ---IYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 677 -------CTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEV 713
E V T Y APE++ T K + DV+S G + E+
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G +VYK T+G +A+K+ L E P + EI + EL+H +IV+ Y
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTA-IREISLMKELKHENIVRLYD 70
Query: 582 FCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR----SVANALSYMHHDC 637
LV+E+++ + S + + +N+++ + L++ H +
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSR--TVGNTPRGLELNLVKYFQWQLLQGLAFCHEN- 127
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGTFGYIAPE-LVYTM 695
I+HRD+ +N+L+ + ++ DFG+A+ F P ++ +E+V T Y AP+ L+ +
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSR 184
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E+I G
Sbjct: 185 TYSTSIDIWSCGCILAEMITG 205
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 560 EFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWT-- 617
+F NE++ +T++++ + G ++ +++YEY+E S+ +++ N+T
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCF 147
Query: 618 ----VRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673
V +I+SV N+ SY+H++ I HRD+ N+L+ + ++SDFG ++++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 674 SSNCTELVGTFGYIAPELVYTMKVTE--KCDVYSFGV 708
+ GT+ ++ PE K D++S G+
Sbjct: 206 KIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEF 561
E+VR FDV +Y IG G G V A ++ +A+KK S + + Q
Sbjct: 16 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYXQ-RT 72
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC---T 678
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD + T
Sbjct: 133 FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 679 ELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
E V T Y APE++ K T+ D++S G + E++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+ V EY+ G L + G +E ++ L ++H I++RD+
Sbjct: 96 YFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIGLFFLHKRG---IIYRDLKLD 149
Query: 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
NV+L + +++DFG+ K D E GT YIAPE++ + D +++GVL
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 710 ALEVIKGDHPRD 721
E++ G P D
Sbjct: 210 LYEMLAGQPPFD 221
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 79
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHRD++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 140 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 523 IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G V A ++ +A+KK F C+ + EIK L RH +I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-----LREIKILLRFRHENIIG 89
Query: 579 FYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
P + Y+ + + T L + + + + L Y+H
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC---TELVGTFGYIAPELVYTM 695
++HRD+ N+LL + ++ DFG+A+ PD + TE V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 696 K-VTEKCDVYSFGVLALEVI 714
K T+ D++S G + E++
Sbjct: 207 KGYTKSIDIWSVGCILAEML 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
IG G G V+ K GE +AVK F + + E + +RH +I+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVL----MRHENILGFIAA 99
Query: 583 CSHPRNS----FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
S +L+ +Y E GSL L + + + + S + L ++H + F
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 639 -----PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC----TELVGTFGYIAP 689
P I HRD+ SKN+L+ + ++D G+A D++ VGT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 690 ELV-----------YTMKVTEKCDVYSFGVLALEVIK 715
E++ Y M D+YSFG++ EV +
Sbjct: 216 EVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 82
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHRD++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 33/227 (14%)
Query: 506 LYEEIVRATNGFDVKYCIGIGG----QGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEF 561
LY + + ++G+ VK IG+G + V+KA + + K + +
Sbjct: 18 LYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK----------SKRDP 67
Query: 562 VNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
EI+ L +H +I+ ++ +LV E + G L + E +
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-- 125
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLL--------CLDYEARVSDFGIAKFLKP 672
V+ ++ + Y+H +VHRD+ N+L CL R+ DFG AK L+
Sbjct: 126 -VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL----RICDFGFAKQLRA 177
Query: 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
++ T ++APE++ E CD++S G+L ++ G P
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 82
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHRD++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 76 LKSLSTLDLSKN-KLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
L L LDLS N +L P +F L L ++L R L P + L L +L L +
Sbjct: 78 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 137
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLG 194
N L T +L NL L L+GN +S L SL L L N+++ P +
Sbjct: 138 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 197
Query: 195 NLSNLVVLHLFENSL 209
+L L+ L+LF N+L
Sbjct: 198 DLGRLMTLYLFANNL 212
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 84 LSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN-QLSGSIP 142
L N+++ SF NL I++L+ N L+ L L LDLS+N QL P
Sbjct: 38 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 97
Query: 143 PTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVL 202
T L L LHL L P + L +L YL+L N L + +L NL L
Sbjct: 98 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 157
Query: 203 HLFENSLFGSIP 214
L N + S+P
Sbjct: 158 FLHGNRI-SSVP 168
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 71 GLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHL 130
GL L +L L L N L +F +L NL ++L+ N +S+ L L L
Sbjct: 122 GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 181
Query: 131 DLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSN 183
L +N+++ P +L L L+L+ N+LS + L++L YL L+ N
Sbjct: 182 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%)
Query: 76 LKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN 135
L L TL L + L P F L L +YL N+L A +L L HL L N
Sbjct: 103 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 162
Query: 136 QLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGN 195
++S L +L L L+ N ++ P +L L L+L +N LS +L
Sbjct: 163 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 222
Query: 196 LSNLVVLHLFEN 207
L L L L +N
Sbjct: 223 LRALQYLRLNDN 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 32 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT-- 88
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHP-----RNSFLVYEYLERGSLATILSNDGAIEE 613
+ EIK L RH +I+ P ++ +LV +L L +L +
Sbjct: 89 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKTQHLSND 144
Query: 614 FNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673
++R L Y+H ++HRD+ N+LL + ++ DFG+A+ PD
Sbjct: 145 HICYFLYQILR----GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
Query: 674 SSNC---TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
+ TE V T Y APE++ K T+ D++S G + E++
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S +VY +Y+ A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 61/138 (44%)
Query: 70 VGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYH 129
G+ LK+L TL ++ NKL F L NLA + L RN L + P V +L L +
Sbjct: 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY 137
Query: 130 LDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSI 189
L L N+L L++L L LY N L L L L L +NQL
Sbjct: 138 LSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197
Query: 190 PISLGNLSNLVVLHLFEN 207
+ +L L +L L EN
Sbjct: 198 EGAFDSLEKLKMLQLQEN 215
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 82 LDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSI 141
LDL NKL+ +F LT L ++YL N L + LK L L +++N+L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 142 PPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISL-GNLSNLV 200
L NLA L L N L P + +L L YL L N+L S+P + L++L
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLK 160
Query: 201 VLHLFENSL 209
L L+ N L
Sbjct: 161 ELRLYNNQL 169
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 70/186 (37%), Gaps = 30/186 (16%)
Query: 129 HLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGS 188
LDL N+LS L+ L +L+L N L I LK+L L ++ N+L +
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-A 99
Query: 189 IPISL-GNLSNLVVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXX 247
+PI + L NL L L N L P + N L
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS------------ 147
Query: 248 XXXXXXXXQLSVGEIPIEI-GKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKL 306
+P + KL+SL L L NQL A LTEL+ L L N+L
Sbjct: 148 --------------LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Query: 307 GNSIPE 312
+PE
Sbjct: 194 -KRVPE 198
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 262 IPIEI-GKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETXXXXXXX 320
+PI + +L +L L L+ NQL PR SLT+L YL L N+L S+P
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL-QSLP--------- 149
Query: 321 XXXXXXXXQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSG 380
KG +KL L EL L N L+ + L+ L L +N
Sbjct: 150 -----------KGV---FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 381 LIPSCFEGMHGLSCIDVSYN 400
+ F+ + L + + N
Sbjct: 196 VPEGAFDSLEKLKMLQLQEN 215
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 8/143 (5%)
Query: 262 IPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETXXXXXXXX 321
IP + KL L N+L +A LT+L L L+ NKL ++P
Sbjct: 35 IPADTKKLD------LQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNL 87
Query: 322 XXXXXXXQFRKGFPVEL-EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSG 380
+ P+ + ++L+ L+EL L N L+ P ++ L L+L +N
Sbjct: 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147
Query: 381 LIPSCFEGMHGLSCIDVSYNELR 403
L F+ + L + + N+L+
Sbjct: 148 LPKGVFDKLTSLKELRLYNNQLK 170
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRS 575
F++ +G G G V+ + SG L+ +++ + V + KT R R
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTG-----KLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 576 IVKF-----------YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
+++ Y F + + L+ +Y+ G L T LS E + +
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTEHEVQI---YVG 166
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGT 683
+ AL ++H I++RDI +N+LL + ++DFG++K F+ ++ + GT
Sbjct: 167 EIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 684 FGYIAPELVYTMKV--TEKCDVYSFGVLALEVIKGDHP 719
Y+AP++V + D +S GVL E++ G P
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 523 IGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ +++ S +AVK ++ + + +F+ E +++ H++I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQ--DELDFLMEALIISKFNHQNI 110
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM----NVIRSVANALSY 632
V+ G F++ E + G L + L ++ M +V R +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVS---DFGIAKFLKPDS----SNCTELVGTFG 685
+ + F +HRDI+++N LL RV+ DFG+A+ + S C L
Sbjct: 171 LEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--PVK 225
Query: 686 YIAPELVYTMKVTEKCDVYSFGVLALEV 713
++ PE T K D +SFGVL E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 76 LKSLSTLDLSKN-KLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
L L LDLS N +L P +F L L ++L R L P + L L +L L +
Sbjct: 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 138
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLG 194
N L T +L NL L L+GN +S L SL L L N+++ P +
Sbjct: 139 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198
Query: 195 NLSNLVVLHLFENSL 209
+L L+ L+LF N+L
Sbjct: 199 DLGRLMTLYLFANNL 213
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 84 LSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN-QLSGSIP 142
L N+++ SF NL I++L+ N L+ L L LDLS+N QL P
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 143 PTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVL 202
T L L LHL L P + L +L YL+L N L + +L NL L
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158
Query: 203 HLFENSLFGSIP 214
L N + S+P
Sbjct: 159 FLHGNRI-SSVP 169
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 71 GLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHL 130
GL L +L L L N L +F +L NL ++L+ N +S+ L L L
Sbjct: 123 GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 182
Query: 131 DLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSN 183
L +N+++ P +L L L+L+ N+LS + L++L YL L+ N
Sbjct: 183 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%)
Query: 76 LKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN 135
L L TL L + L P F L L +YL N+L A +L L HL L N
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163
Query: 136 QLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGN 195
++S L +L L L+ N ++ P +L L L+L +N LS +L
Sbjct: 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223
Query: 196 LSNLVVLHLFEN 207
L L L L +N
Sbjct: 224 LRALQYLRLNDN 235
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 33/219 (15%)
Query: 514 TNGFDVKYCIGIGG----QGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLT 569
++G+ VK IG+G + V+KA + + K + + EI+ L
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK----------SKRDPSEEIEILL 75
Query: 570 EL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVAN 628
+H +I+ ++ +LV E + G L + E + V+ ++
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF---VLHTIGK 132
Query: 629 ALSYMHHDCFPPIVHRDISSKNVLL--------CLDYEARVSDFGIAKFLKPDSSNCTEL 680
+ Y+H +VHRD+ N+L CL R+ DFG AK L+ ++
Sbjct: 133 TVEYLHSQG---VVHRDLKPSNILYVDESGNPECL----RICDFGFAKQLRAENGLLMTP 185
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE++ E CD++S G+L ++ G P
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 527 GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586
G G Y AK +KK V + E E+ L E+RH +I+ + +
Sbjct: 49 GTGKEYAAKF-------IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK 101
Query: 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646
+ L+ E + G L L+ ++ E T ++ + + + Y+H I H D+
Sbjct: 102 TDVVLILELVSGGELFDFLAEKESLTEDEAT---QFLKQILDGVHYLHS---KRIAHFDL 155
Query: 647 SSKNVLLCLDYEA-----RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKC 701
+N++L LD ++ DFGIA ++ + + GT ++APE+V + +
Sbjct: 156 KPENIML-LDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEA 213
Query: 702 DVYSFGVLALEVIKGDHP 719
D++S GV+ ++ G P
Sbjct: 214 DMWSIGVITYILLSGASP 231
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ Y +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 510 IVRATNGFDVKYCIGIG--GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
I+ ++ +D IG G G + + KLT E++AVK + Q E +N
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDENVQREIINH--- 70
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
LRH +IV+F P + ++ EY G L + N G E + +
Sbjct: 71 -RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF---FFQQLL 126
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR--VSDFGIAK----FLKPDSSNCTELV 681
+ +SY H I HRD+ +N LL R + DFG +K +P S+ V
Sbjct: 127 SGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----V 178
Query: 682 GTFGYIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHP 719
GT YIAPE++ + K DV+S GV ++ G +P
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
IV+RD+ +N+LL R+SD G+A + P+ VGT GY+APE+V + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 701 CDVYSFGVLALEVIKGDHP 719
D ++ G L E+I G P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A++K F C+
Sbjct: 16 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT-- 72
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 73 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 130 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
TE V T Y APE++ K T+ D++S G + E++
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 21/194 (10%)
Query: 529 GSVYKAKLTSGEILAVKK--FHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF-YGFCSH 585
G Y K+ E++ K H+L E + L RH + Y F +H
Sbjct: 33 GRYYAMKILKKEVIVAKDEVAHTL------------TENRVLQNSRHPFLTALKYSFQTH 80
Query: 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRD 645
R F V EY G L LS + E + +AL Y+H + +V+RD
Sbjct: 81 DRLCF-VMEYANGGELFFHLSRERVFSEDRARF---YGAEIVSALDYLHSE--KNVVYRD 134
Query: 646 ISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYS 705
+ +N++L D +++DFG+ K D + GT Y+APE++ D +
Sbjct: 135 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 194
Query: 706 FGVLALEVIKGDHP 719
GV+ E++ G P
Sbjct: 195 LGVVMYEMMCGRLP 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 529 GSVYKAKLTSGEILAVKK--FHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF-YGFCSH 585
G Y K+ E++ K H+L E + L RH + Y F +H
Sbjct: 173 GRYYAMKILKKEVIVAKDEVAHTL------------TENRVLQNSRHPFLTALKYSFQTH 220
Query: 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRD 645
R F V EY G L LS + E R + +AL Y+H + +V+RD
Sbjct: 221 DRLCF-VMEYANGGELFFHLSRERVFSEDR--ARFYGA-EIVSALDYLHSE--KNVVYRD 274
Query: 646 ISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYS 705
+ +N++L D +++DFG+ K D + GT Y+APE++ D +
Sbjct: 275 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 334
Query: 706 FGVLALEVIKGDHP 719
GV+ E++ G P
Sbjct: 335 LGVVMYEMMCGRLP 348
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G V A K + +I++ +KF E P EI+ L +L H I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+K F + ++V E +E G L + + ++E T ++ + + A+ Y+H +
Sbjct: 84 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 139
Query: 637 CFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL-- 691
I+HRD+ +NVLL E +++DFG +K L ++S L GT Y+APE+
Sbjct: 140 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 195
Query: 692 -VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V T D +S GV+ + G P
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 529 GSVYKAKLTSGEILAVKK--FHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF-YGFCSH 585
G Y K+ E++ K H+L E + L RH + Y F +H
Sbjct: 176 GRYYAMKILKKEVIVAKDEVAHTL------------TENRVLQNSRHPFLTALKYSFQTH 223
Query: 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS-VANALSYMHHDCFPPIVHR 644
R F V EY G L LS + E R + + +AL Y+H + +V+R
Sbjct: 224 DRLCF-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVSALDYLHSE--KNVVYR 276
Query: 645 DISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVY 704
D+ +N++L D +++DFG+ K D + GT Y+APE++ D +
Sbjct: 277 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 336
Query: 705 SFGVLALEVIKGDHP 719
GV+ E++ G P
Sbjct: 337 GLGVVMYEMMCGRLP 351
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 21/194 (10%)
Query: 529 GSVYKAKLTSGEILAVKK--FHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF-YGFCSH 585
G Y K+ E++ K H+L E + L RH + Y F +H
Sbjct: 35 GRYYAMKILKKEVIVAKDEVAHTL------------TENRVLQNSRHPFLTALKYSFQTH 82
Query: 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRD 645
R F V EY G L LS + E + +AL Y+H + +V+RD
Sbjct: 83 DRLCF-VMEYANGGELFFHLSRERVFSEDRARF---YGAEIVSALDYLHSE--KNVVYRD 136
Query: 646 ISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYS 705
+ +N++L D +++DFG+ K D + GT Y+APE++ D +
Sbjct: 137 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 196
Query: 706 FGVLALEVIKGDHP 719
GV+ E++ G P
Sbjct: 197 LGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 21/194 (10%)
Query: 529 GSVYKAKLTSGEILAVKK--FHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF-YGFCSH 585
G Y K+ E++ K H+L E + L RH + Y F +H
Sbjct: 34 GRYYAMKILKKEVIVAKDEVAHTL------------TENRVLQNSRHPFLTALKYSFQTH 81
Query: 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRD 645
R F V EY G L LS + E + +AL Y+H + +V+RD
Sbjct: 82 DRLCF-VMEYANGGELFFHLSRERVFSEDRARF---YGAEIVSALDYLHSE--KNVVYRD 135
Query: 646 ISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYS 705
+ +N++L D +++DFG+ K D + GT Y+APE++ D +
Sbjct: 136 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 706 FGVLALEVIKGDHP 719
GV+ E++ G P
Sbjct: 196 LGVVMYEMMCGRLP 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G V A K + +I++ +KF E P EI+ L +L H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+K F + ++V E +E G L + + ++E T ++ + + A+ Y+H +
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 133
Query: 637 CFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL-- 691
I+HRD+ +NVLL E +++DFG +K L ++S L GT Y+APE+
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 189
Query: 692 -VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V T D +S GV+ + G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
IV+RD+ +N+LL R+SD G+A + P+ VGT GY+APE+V + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 701 CDVYSFGVLALEVIKGDHP 719
D ++ G L E+I G P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G V A K + +I++ +KF E P EI+ L +L H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+K F + ++V E +E G L + + ++E T ++ + + A+ Y+H +
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 133
Query: 637 CFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL-- 691
I+HRD+ +NVLL E +++DFG +K L ++S L GT Y+APE+
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 189
Query: 692 -VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V T D +S GV+ + G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G V A K + +I++ +KF E P EI+ L +L H I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+K F + ++V E +E G L + + ++E T ++ + + A+ Y+H +
Sbjct: 77 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 132
Query: 637 CFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL-- 691
I+HRD+ +NVLL E +++DFG +K L ++S L GT Y+APE+
Sbjct: 133 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLV 188
Query: 692 -VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V T D +S GV+ + G P
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 560 EFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS------------ 606
+ V+E++ + + +H++I+ G C+ +++ Y +G+L L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 607 -NDGAIEEFNWTVRMNVIRSVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
N E+ + ++ +A + Y+ C +HRD++++NVL+ + +++DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 201
Query: 665 GIAKFLKPDSSNCTELVGT------FGYIAPELVYTMKVTEKCDVYSFGVLALEV 713
G+A+ D +N T ++APE ++ T + DV+SFGVL E+
Sbjct: 202 GLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G V A K + +I++ +KF E P EI+ L +L H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+K F + ++V E +E G L + + ++E T ++ + + A+ Y+H +
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL-AVQYLHEN 133
Query: 637 CFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL-- 691
I+HRD+ +NVLL E +++DFG +K L ++S L GT Y+APE+
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVLV 189
Query: 692 -VYTMKVTEKCDVYSFGVLALEVIKGDHP 719
V T D +S GV+ + G P
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 527 GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586
G G Y AK L+ + V + E E+ L E+RH +I+ + +
Sbjct: 35 GTGKEYAAKFIKKRRLSSSR-------RGVSREEIEREVNILREIRHPNIITLHDIFENK 87
Query: 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646
+ L+ E + G L L+ ++ E T ++ + + + Y+H I H D+
Sbjct: 88 TDVVLILELVSGGELFDFLAEKESLTEDEAT---QFLKQILDGVHYLHS---KRIAHFDL 141
Query: 647 SSKNVLLCLDYEA-----RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKC 701
+N++L LD ++ DFGIA ++ + + GT ++APE+V + +
Sbjct: 142 KPENIML-LDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 702 DVYSFGVLALEVIKGDHP 719
D++S GV+ ++ G P
Sbjct: 200 DMWSIGVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 527 GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586
G G Y AK L+ + V + E E+ L E+RH +I+ + +
Sbjct: 28 GTGKEYAAKFIKKRRLSSSR-------RGVSREEIEREVNILREIRHPNIITLHDIFENK 80
Query: 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646
+ L+ E + G L L+ ++ E T ++ + + + Y+H I H D+
Sbjct: 81 TDVVLILELVSGGELFDFLAEKESLTEDEAT---QFLKQILDGVHYLHS---KRIAHFDL 134
Query: 647 SSKNVLLCLDYEA-----RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKC 701
+N++L LD ++ DFGIA ++ + + GT ++APE+V + +
Sbjct: 135 KPENIML-LDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEA 192
Query: 702 DVYSFGVLALEVIKGDHP 719
D++S GV+ ++ G P
Sbjct: 193 DMWSIGVITYILLSGASP 210
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 80/199 (40%), Gaps = 4/199 (2%)
Query: 84 LSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN-QLSGSIP 142
L N+++ SF + NL I++L+ N+L+ L L LDLS+N QL P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 143 PTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVL 202
T L +L LHL L P + L +L YL+L N L + +L NL L
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 203 HLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXXXXXXXXXQLSVGEI 262
L N + NH++ V P + LS+ +
Sbjct: 158 FLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSM--L 215
Query: 263 PIEI-GKLSSLNYLVLNGN 280
P E+ L SL YL LN N
Sbjct: 216 PAEVLVPLRSLQYLRLNDN 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 76 LKSLSTLDLSKN-KLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
L L LDLS N +L P +F L +L ++L R L P + L L +L L +
Sbjct: 78 LTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 137
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLG 194
N L T +L NL L L+GN + L SL L L N ++ P +
Sbjct: 138 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 197
Query: 195 NLSNLVVLHLFENSL 209
+L L+ L+LF N+L
Sbjct: 198 DLGRLMTLYLFANNL 212
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 71 GLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHL 130
GL L +L L L N L +F +L NL ++L+ N + + L L L
Sbjct: 122 GLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRL 181
Query: 131 DLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSN 183
L +N ++ P +L L L+L+ N+LS ++ L+SL YL L+ N
Sbjct: 182 LLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV---K 578
+G G GSV A SGE +A+KK + E+ + + E+ L ++H +++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 108
Query: 579 FYGFCSHPRNSFLVYEYLE--RGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+ S RN + Y + + L I+ + + E+ + ++ + L Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA 163
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-M 695
+VHRD+ N+ + D E ++ DFG+A+ + T V T Y APE++ + M
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWM 217
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTG 238
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEF---- 614
++E+K L + H ++V G C+ P +V E+ + G+L+T L + EF
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR--NEFVPYK 134
Query: 615 ----NWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK-- 668
++ ++I M +HRD++++N+LL ++ DFG+A+
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 669 FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 82
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHRD++++N ++ D+ ++ DFG+ + + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 196
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLG 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 199
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLG 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 16 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 72
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 73 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 130 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
E V T Y APE++ K T+ D++S G + E++
Sbjct: 187 FLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 509 EIVRATNGFDV--KYC----IGIGGQGSVYKAKLTSGEI-LAVKK---FHSLWPCEMVPQ 558
E+VR FDV +Y IG G G V A ++ +A+KK F C+
Sbjct: 17 EMVRG-QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT-- 73
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTV 618
+ EIK L RH +I+ P + Y+ + + T L + +
Sbjct: 74 ---LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 619 RMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC- 677
+ + L Y+H ++HRD+ N+LL + ++ DFG+A+ PD +
Sbjct: 131 ICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 187
Query: 678 --TELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714
E V T Y APE++ K T+ D++S G + E++
Sbjct: 188 FLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 81
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHRD++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 142 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G G+V A +G +A+KK + + E+ + + E++ L +RH +++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGLLD 91
Query: 582 FCSHPR--NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ + F + YL + T L E+ ++ + L Y+H
Sbjct: 92 VFTPDETLDDFTDF-YLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---A 147
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + DS +V T Y APE++ M+ T
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV-TRWYRAPEVILNWMRYT 204
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E+I G
Sbjct: 205 QTVDIWSVGCIMAEMITG 222
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 57 NPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSAS 116
NP K V +I L+S+ TLDL+ ++ P + L+NL ++YL N ++ +
Sbjct: 95 NPLKNVSAI--------AGLQSIKTLDLTSTQITDVTPLA--GLSNLQVLYLDLNQIT-N 143
Query: 117 IPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLF 176
I P+ G L L +L + Q+S P L NLS L L N +S P + +L +L
Sbjct: 144 ISPLAG-LTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLI 198
Query: 177 YLHLSSNQLSGSIPISLGNLSNLVVLHLFENSL 209
+HL +NQ+S P L N SNL ++ L ++
Sbjct: 199 EVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 82
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHRD++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 214
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLG 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLG 231
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ + ++V E L + L +I+ + R + +++ A+ +H
Sbjct: 79 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG--- 131
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMKVT 698
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VGT Y+ PE + M +
Sbjct: 132 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 699 EK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPT 747
+ DV+S G + + G P EI P +P
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 250
Query: 748 PPQNVQDELISIVEVAFLCLNESPESR 774
+++QD V CL P+ R
Sbjct: 251 --KDLQD-------VLKCCLKRDPKQR 268
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF 684
+ + L ++H I++RD+ +NVLL D R+SD G+A LK + GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 685 GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
G++APEL+ + D ++ GV E+I P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF 684
+ + L ++H I++RD+ +NVLL D R+SD G+A LK + GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 685 GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
G++APEL+ + D ++ GV E+I P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF 684
+ + L ++H I++RD+ +NVLL D R+SD G+A LK + GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 685 GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
G++APEL+ + D ++ GV E+I P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 203
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ + ++V E L + L +I+ + R + +++ A+ +H
Sbjct: 75 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG--- 127
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMKVT 698
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VGT Y+ PE + M +
Sbjct: 128 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 699 EK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPT 747
+ DV+S G + + G P EI P +P
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 246
Query: 748 PPQNVQDELISIVEVAFLCLNESPESR 774
+++QD V CL P+ R
Sbjct: 247 --KDLQD-------VLKCCLKRDPKQR 264
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
+G G +VYK K + L K L E P + E+ L +L+H +IV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA-IREVSLLKDLKHANIVTLHDI 68
Query: 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR----SVANALSYMHHDCF 638
++ LV+EYL++ L L + G I + M+ ++ + L+Y H
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDCGNI------INMHNVKLFLFQLLRGLAYCHRQ-- 119
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPE-LVYTMKV 697
++HRD+ +N+L+ E +++DFG+A+ + V T Y P+ L+ +
Sbjct: 120 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 698 TEKCDVYSFGVLALEVIKG 716
+ + D++ G + E+ G
Sbjct: 179 STQIDMWGVGCIFYEMATG 197
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 208
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLG 232
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF 684
+ + L ++H I++RD+ +NVLL D R+SD G+A LK + GT
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 685 GYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
G++APEL+ + D ++ GV E+I P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL- 571
FD+ IG G V +L + + VKK E+V E ++ ++T +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK-------ELVNDDEDIDWVQTEKHVF 106
Query: 572 ----RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
H +V + F V EY+ G L + + E + ++
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEIS 163
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF-LKPDSSNCTELVGTFGY 686
AL+Y+H I++RD+ NVLL + +++D+G+ K L+P + T GT Y
Sbjct: 164 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNY 219
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
IAPE++ D ++ GVL E++ G P D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 229
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLG 253
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 33/235 (14%)
Query: 495 LLSILTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCE 554
++ +L +GK + + TN IG G G V++AKL + +A+KK
Sbjct: 24 VIKVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKK-------- 71
Query: 555 MVPQPEFVN-EIKTLTELRHRSIVK----FYGFCSHPRNSF--LVYEYLERGSLATILSN 607
++ F N E++ + ++H ++V FY F LV EY+ T+
Sbjct: 72 VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE----TVYRA 127
Query: 608 DGAIEEFNWTVRMNVIR----SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-RVS 662
+ T+ M +I+ + +L+Y+H I HRDI +N+LL ++
Sbjct: 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLI 184
Query: 663 DFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTEKCDVYSFGVLALEVIKG 716
DFG AK L N + + + Y APEL++ T D++S G + E+++G
Sbjct: 185 DFGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 581 GFCSHPRNSFLVYEYLERGS--LATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
+ + ++V +E G+ L + L +I+ + R + +++ A+ +H
Sbjct: 76 DYEITDQYIYMV---MECGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG- 128
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMK 696
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VGT Y+ PE + M
Sbjct: 129 --IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 697 VTEK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRL 745
+ + DV+S G + + G P EI P +
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245
Query: 746 PTPPQNVQDELISIVEVAFLCLNESPESR 774
P +++QD V CL P+ R
Sbjct: 246 PE--KDLQD-------VLKCCLKRDPKQR 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 200
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLG 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 233
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLG 257
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ + ++V E L + L +I+ + R + +++ A+ +H
Sbjct: 95 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG--- 147
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMKVT 698
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VGT Y+ PE + M +
Sbjct: 148 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 699 EK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRLPT 747
+ DV+S G + + G P EI P +P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 266
Query: 748 PPQNVQDELISIVEVAFLCLNESPESR 774
+++QD V CL P+ R
Sbjct: 267 --KDLQD-------VLKCCLKRDPKQR 284
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 274
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLG 298
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 21/221 (9%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVN 563
L+ ++ T+G++VK IG+G + K T+ E AVK + +
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNME-FAVKIIDK-------SKRDPTE 64
Query: 564 EIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI+ L +H +I+ + ++V E ++ G L + E + V
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA---V 121
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD----YEARVSDFGIAKFLKPDSSNCT 678
+ ++ + Y+H +VHRD+ N+L + R+ DFG AK L+ ++
Sbjct: 122 LFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE++ CD++S GVL ++ G P
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
FLV++ +++G L L+ + E M + V AL ++ IVHRD+ +
Sbjct: 87 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPE 140
Query: 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK------VTEKCDV 703
N+LL D +++DFG + L P E+ GT Y+APE++ ++ D+
Sbjct: 141 NILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 704 YSFGVLALEVIKGDHP 719
+S GV+ ++ G P
Sbjct: 200 WSTGVIMYTLLAGSPP 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 223
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLG 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSN----------D 608
++E+K L + H ++V G C+ P +V E+ + G+L+T L + +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 609 GAIEEFNWTVRMNVIRS--VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666
++F T+ + S VA + ++ +HRD++++N+LL ++ DFG+
Sbjct: 139 DLYKDF-LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 667 AKFL--KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL---- 571
FD+ IG G V +L + I A+K E+V E ++ ++T +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK----ELVNDDEDIDWVQTEKHVFEQA 66
Query: 572 -RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANAL 630
H +V + F V EY+ G L + + E + ++ AL
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLAL 123
Query: 631 SYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF-LKPDSSNCTELVGTFGYIAP 689
+Y+H I++RD+ NVLL + +++D+G+ K L+P + GT YIAP
Sbjct: 124 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAP 179
Query: 690 ELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
E++ D ++ GVL E++ G P D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSND--------GA 610
++E+K L + H ++V G C+ P +V E+ + G+L+T L +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 611 IEEFNWTVRMNVIRS--VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668
++F T+ + S VA + ++ +HRD++++N+LL ++ DFG+A+
Sbjct: 137 YKDF-LTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 669 --FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
+ PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-----KRNEFV 131
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 664 FGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 231
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLG 255
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-----KRNEFV 168
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 169 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 228
Query: 664 FGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 36/212 (16%)
Query: 529 GSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G VYK L + +A+K E + EF +E L+H ++V G
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKD--KAEGPLREEFRHEAMLRARLQHPNVVCLLGV 97
Query: 583 CSHPRNSFLVYEYLERGSLATIL------SNDGAIEEFNWTVR--------MNVIRSVAN 628
+ + +++ Y G L L S+ G+ ++ + TV+ ++++ +A
Sbjct: 98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFVHLVAQIAA 156
Query: 629 ALSYM--HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT--- 683
+ Y+ HH +VH+D++++NVL+ ++SD G+ F + +++ +L+G
Sbjct: 157 GMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLL 209
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
++APE + K + D++S+GV+ EV
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQ---PEFVNE 564
E+++ F + +G G GSV +A+L + VK + +++ EF+ E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNS------FLVYEYLERGSL-ATILSNDGAIEEFNWT 617
+ E H + K G R ++ +++ G L A +L++ FN
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 618 VR--MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS- 674
++ + + +A + Y+ F +HRD++++N +L D V+DFG+++ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 675 --SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI-KGDHPRDFXXXXXXXXX 731
C + ++A E + T DV++FGV E++ +G P
Sbjct: 193 YRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP-------YAGIE 244
Query: 732 XXXXXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP 775
I RL PP+ +++ + ++ + C + P+ RP
Sbjct: 245 NAEIYNYLIGGNRLKQPPECMEE----VYDLMYQCWSADPKQRP 284
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 229
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL---- 571
FD+ IG G V +L + I A+K E+V E ++ ++T +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK----ELVNDDEDIDWVQTEKHVFEQA 62
Query: 572 -RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANAL 630
H +V + F V EY+ G L + + E + ++ AL
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLAL 119
Query: 631 SYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF-LKPDSSNCTELVGTFGYIAP 689
+Y+H I++RD+ NVLL + +++D+G+ K L+P + GT YIAP
Sbjct: 120 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAP 175
Query: 690 ELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
E++ D ++ GVL E++ G P D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 527 GQGSVYKAKLTSGEILAVK---KFHS---LWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
G+GS K KL + K KF S L +M + E EI L LRH I+K Y
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE--REISYLKLLRHPHIIKLY 75
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP 640
+ P + +V EY I+ E+ + + A+ Y H
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAIEYCHRH---K 128
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVTE 699
IVHRD+ +N+LL + +++DFG++ + D + G+ Y APE++ +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 700 KCDVYSFGVLALEVIKGDHPRD 721
+ DV+S G++ ++ G P D
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 36/212 (16%)
Query: 529 GSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582
G VYK L + +A+K E + EF +E L+H ++V G
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKD--KAEGPLREEFRHEAMLRARLQHPNVVCLLGV 80
Query: 583 CSHPRNSFLVYEYLERGSLATIL------SNDGAIEEFNWTVR--------MNVIRSVAN 628
+ + +++ Y G L L S+ G+ ++ + TV+ ++++ +A
Sbjct: 81 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFVHLVAQIAA 139
Query: 629 ALSYM--HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGT--- 683
+ Y+ HH +VH+D++++NVL+ ++SD G+ F + +++ +L+G
Sbjct: 140 GMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLL 192
Query: 684 -FGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
++APE + K + D++S+GV+ EV
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVYEYLERGSL-ATILSNDGAIEEFNWTVRMNVIR----SVANALSYMH 634
Y F S VY L + AT+ T+ + ++ + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 523 IGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIV---K 578
+G G GSV A SGE +A+KK + E+ + + E+ L ++H +++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 90
Query: 579 FYGFCSHPRNSFLVYEYLE--RGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+ S RN + Y + + L I+ + E+ + ++ + L Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS- 144
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-M 695
+VHRD+ N+ + D E ++ DFG+A+ + T V T Y APE++ + M
Sbjct: 145 --AGVVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWM 199
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTG 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
FLV++ +++G L L+ + E M + V AL ++ IVHRD+ +
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPE 153
Query: 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK------VTEKCDV 703
N+LL D +++DFG + L P E+ GT Y+APE++ ++ D+
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 704 YSFGVLALEVIKGDHP 719
+S GV+ ++ G P
Sbjct: 213 WSTGVIMYTLLAGSPP 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
E + L+H +IV+ + S +LV++ + G L + A E ++ +
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHC 135
Query: 623 IRSVANALSYMH-HDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKFLKPDSSNCT 678
I + +++++H HD IVHRD+ +N+LL C +++DFG+A ++ +
Sbjct: 136 IHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF 191
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
GT GY++PE++ + D+++ GV+
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVI 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 517 FDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL---- 571
FD+ IG G V +L + I A+K E+V E ++ ++T +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK----ELVNDDEDIDWVQTEKHVFEQA 77
Query: 572 -RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANAL 630
H +V + F V EY+ G L + + E + ++ AL
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLAL 134
Query: 631 SYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF-LKPDSSNCTELVGTFGYIAP 689
+Y+H I++RD+ NVLL + +++D+G+ K L+P + GT YIAP
Sbjct: 135 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAP 190
Query: 690 ELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721
E++ D ++ GVL E++ G P D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 592 VYEYLE-----RGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646
VY Y++ + +L ++ ++E+ V +++ +A A+ ++H ++HRD+
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDL 190
Query: 647 SSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL------------VGTFGYIAPELVYT 694
N+ +D +V DFG+ + D T L VGT Y++PE ++
Sbjct: 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG 250
Query: 695 MKVTEKCDVYSFGVLALEVI 714
+ K D++S G++ E++
Sbjct: 251 NNYSHKVDIFSLGLILFELL 270
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 512 RATNGFDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFHSLWPCEMVPQPEFVNEIKTLTE 570
R F+ C+G GG G V++AK + A+K+ P + + + + E+K L +
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAK 60
Query: 571 LRHRSIVKFY 580
L H IV+++
Sbjct: 61 LEHPGIVRYF 70
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-----KRNEFV 131
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 664 FGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
L+EE+ + V+ C+ I G Y AK+ + + L+ + L E
Sbjct: 8 LFEELGKGAFSV-VRRCMKIP-TGQEYAAKIINTKKLSARDHQKL-----------EREA 54
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ L+H +IV+ + S +LV++ + G L + A E ++ + I+
Sbjct: 55 RICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQ 111
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVG 682
+ ++++ H IVHRD+ +N+LL + +++DFG+A ++ D G
Sbjct: 112 ILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVL 709
T GY++PE++ + D+++ GV+
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVI 195
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 514 TNGFDVKYCIGIGG-----------QGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
++ +DVK +G G G + AK+ + + L+ + F L
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-----------E 76
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
E + +L+H +IV+ + +LV++ + G L + A E ++ +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHC 133
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTE 679
I+ + +++Y H + IVHR++ +N+LL + +++DFG+A + DS
Sbjct: 134 IQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 189
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
GT GY++PE++ ++ D+++ GV+
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
L+EE+ + V+ C+ I G Y AK+ + + L+ + L E
Sbjct: 8 LFEELGKGAFSV-VRRCMKIP-TGQEYAAKIINTKKLSARDHQKL-----------EREA 54
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ L+H +IV+ + S +LV++ + G L + A E ++ + I+
Sbjct: 55 RICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQ 111
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVG 682
+ ++++ H IVHRD+ +N+LL + +++DFG+A ++ D G
Sbjct: 112 ILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVL 709
T GY++PE++ + D+++ GV+
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVI 195
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSN----------- 607
++E+K L + H ++V G C+ P +V E+ + G+L+T L +
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 608 DGAIEEFNWTVRMNVIRS--VANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664
+ ++F T+ + S VA + ++ C +HRD++++N+LL ++ DF
Sbjct: 138 EDLYKDF-LTLEHLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDF 192
Query: 665 GIAKFL--KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
G+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 512 RATNGFDVKYCIGIGGQGSVYK--AKLTSGEILA--VKKFHSLWPCEMVPQPEFVNEIKT 567
+ + +D+ +G G V K K T E A +KK S V + E E+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
L ++ H +++ + + + L+ E + G L L+ ++ E T + I+ +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQIL 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDY-----EARVSDFGIAKFLKPDSSNCTELVG 682
+ ++Y+H I H D+ +N++L LD ++ DFG+A ++ D + G
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFG 180
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE+V + + D++S GV+ ++ G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 108 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 163
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 221 QTVDIWSVGCIMAELLTG 238
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
IG G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-----KRNEFV 131
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 664 FGIAKFL--KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 523 IGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVN-EIKTLTELRHRSIVKF- 579
IG G G VY+AKL SGE++A+KK ++ F N E++ + +L H +IV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 580 YGFCSHPRNSFLVY-----EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
Y F S VY +Y+ A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 635 HDCFPPIVHRDISSKNVLLCLDYEA-RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
I HRDI +N+LL D ++ DFG AK L N + + + Y APEL++
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 694 -TMKVTEKCDVYSFGVLALEVIKG 716
T DV+S G + E++ G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 512 RATNGFDVKYCIGIGGQGSVYK--AKLTSGEILA--VKKFHSLWPCEMVPQPEFVNEIKT 567
+ + +D+ +G G V K K T E A +KK S V + E E+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
L ++ H +++ + + + L+ E + G L L+ ++ E T + I+ +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQIL 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDY-----EARVSDFGIAKFLKPDSSNCTELVG 682
+ ++Y+H I H D+ +N++L LD ++ DFG+A ++ D + G
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFG 180
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE+V + + D++S GV+ ++ G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSN----------- 607
++E+K L + H ++V G C+ P +V E+ + G+L+T L +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 608 -DGAIEEFNWTVRMNVIRS--VANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSD 663
+ ++F T+ + S VA + ++ C +HRD++++N+LL ++ D
Sbjct: 139 PEDLYKDF-LTLEHLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICD 193
Query: 664 FGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 246
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLVY-EYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS-----KRNEFV 122
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 664 FGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 109 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 222 QTVDIWSVGCIMAELLTG 239
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 512 RATNGFDVKYCIGIGGQGSVYK--AKLTSGEILA--VKKFHSLWPCEMVPQPEFVNEIKT 567
+ + +D+ +G G V K K T E A +KK S V + E E+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
L ++ H +++ + + + L+ E + G L L+ ++ E T + I+ +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQIL 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDY-----EARVSDFGIAKFLKPDSSNCTELVG 682
+ ++Y+H I H D+ +N++L LD ++ DFG+A ++ D + G
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFG 180
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE+V + + D++S GV+ ++ G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 140
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 523 IGIGGQGSV---YKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF 579
+G G GSV Y A+L + +AVKK + ++ E++ L L+H +++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQS-LIHARRTYRELRLLKHLKHENVIGL 92
Query: 580 YGFCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ P S + YL + L+N + + ++ + L Y+H
Sbjct: 93 LDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS-- 149
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MK 696
I+HRD+ NV + D E R+ DFG+A + T V T Y APE++ M
Sbjct: 150 -AGIIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 697 VTEKCDVYSFGVLALEVIKG 716
+ D++S G + E+++G
Sbjct: 206 YNQTVDIWSVGCIMAELLQG 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 512 RATNGFDVKYCIGIGGQGSVYK--AKLTSGEILA--VKKFHSLWPCEMVPQPEFVNEIKT 567
+ + +D+ +G G V K K T E A +KK S V + E E+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
L ++ H +++ + + + L+ E + G L L+ ++ E T + I+ +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQIL 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDY-----EARVSDFGIAKFLKPDSSNCTELVG 682
+ ++Y+H I H D+ +N++L LD ++ DFG+A ++ D + G
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFG 180
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE+V + + D++S GV+ ++ G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLVY-EYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS-----KRNEFV 122
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 664 FGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 581 GFCSHPRNSFLVYEYLERG--SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
+ +Y +E G L + L +I+ + R + +++ A+ +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG- 175
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMK 696
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VGT Y+ PE + M
Sbjct: 176 --IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 697 VTEK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRL 745
+ + DV+S G + + G P EI P +
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 746 PTPPQNVQDELISIVEVAFLCLNESPESR 774
P +++QD V CL P+ R
Sbjct: 293 PE--KDLQD-------VLKCCLKRDPKQR 312
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 581 GFCSHPRNSFLVYEYLERG--SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
+ +Y +E G L + L +I+ + R + +++ A+ +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG- 175
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMK 696
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VGT Y+ PE + M
Sbjct: 176 --IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 697 VTEK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRL 745
+ + DV+S G + + G P EI P +
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 746 PTPPQNVQDELISIVEVAFLCLNESPESR 774
P +++QD V CL P+ R
Sbjct: 293 PE--KDLQD-------VLKCCLKRDPKQR 312
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPR-----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+ R N + +L L I+ ++ + ++R L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR----GLKYIHS- 143
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-M 695
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTG 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 512 RATNGFDVKYCIGIGGQGSVYK--AKLTSGEILA--VKKFHSLWPCEMVPQPEFVNEIKT 567
+ + +D+ +G G V K K T E A +KK S V + E E+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
L ++ H +++ + + + L+ E + G L L+ ++ E T + I+ +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQIL 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDY-----EARVSDFGIAKFLKPDSSNCTELVG 682
+ ++Y+H I H D+ +N++L LD ++ DFG+A ++ D + G
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFG 180
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE+V + + D++S GV+ ++ G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-----KRNEFV 122
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 664 FGIAKFL--KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 99 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 154
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 211
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 212 QTVDIWSVGCIMAELLTG 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 523 IGIGGQGSV---YKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKF 579
+G G GSV Y A+L + +AVKK + ++ E++ L L+H +++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQS-LIHARRTYRELRLLKHLKHENVIGL 92
Query: 580 YGFCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC 637
+ P S + YL + L+N + + ++ + L Y+H
Sbjct: 93 LDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MK 696
I+HRD+ NV + D E R+ DFG+A + T V T Y APE++ M
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 697 VTEKCDVYSFGVLALEVIKG 716
+ D++S G + E+++G
Sbjct: 206 YNQTVDIWSVGCIMAELLQG 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 561 FVNEIKTLTELRHR-SIVKFYGFCSHPRNSFLVY-EYLERGSLATILSNDGAIEEFNWTV 618
++E+K L + H ++V G C+ P +V E+ + G+L+T L + + N V
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS-----KRNEFV 122
Query: 619 RMNVIRS--VANALSYMHHDCFP-------------PIVHRDISSKNVLLCLDYEARVSD 663
V + L+ H C+ +HRD++++N+LL ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 664 FGIAKFL--KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVI 714
FG+A+ + PD + ++APE ++ T + DV+SFGVL E+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 83
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHR+++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 144 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKA---KLTSGEI---LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI 576
+G G G VY+ + GE +AVK + + + EF+NE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE--SASLRERIEFLNEASVMKGFTCHHV 82
Query: 577 VKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN-------WTVRMNVIRSVANA 629
V+ G S + + +V E + G L + L + E N + + +A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTF--GYI 687
++Y++ F VHR+++++N ++ D+ ++ DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 688 APELVYTMKVTEKCDVYSFGVLALEV 713
APE + T D++SFGV+ E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 514 TNGFDVKYCIGIGG-----------QGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
++ +DVK +G G G + AK+ + + L+ + F L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-----------E 53
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
E + +L+H +IV+ + +LV++ + G L + A E ++ +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHC 110
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTE 679
I+ + +++Y H + IVHR++ +N+LL + +++DFG+A + DS
Sbjct: 111 IQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 166
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
GT GY++PE++ ++ D+++ GV+
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVI 196
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 100 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 155
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 213 QTVDIWSVGCIMAELLTG 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 140
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + + V T Y APE++ M
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWMHYN 197
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 523 IGIGGQGSV---YKAKLTSGEILAVKK----FHSLWPCEMVPQPEFVNEIKTLTELRHRS 575
+G G GSV Y A+L + +AVKK F SL + E++ L L+H +
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSL-----IHARRTYRELRLLKHLKHEN 80
Query: 576 IVKFYGFCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
++ + P S + YL + L+N + + ++ + L Y+
Sbjct: 81 VIGLLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H I+HRD+ NV + D E R+ DFG+A + T V T Y APE++
Sbjct: 140 HS---AGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVATRWYRAPEIML 193
Query: 694 T-MKVTEKCDVYSFGVLALEVIKG 716
M + D++S G + E+++G
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + + V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLAGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ IG G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + + V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I++RD+ NV+L + +++DFG+ K D GT YIAPE++ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 701 CDVYSFGVLALEVIKGDHP 719
D ++FGVL E++ G P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ IG G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+ V EY+ G L + G +E + +A L ++ I++RD+
Sbjct: 97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVF---YAAEIAIGLFFLQSKG---IIYRDLKLD 150
Query: 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
NV+L + +++DFG+ K D GT YIAPE++ + D ++FGVL
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 710 ALEVIKGDHP 719
E++ G P
Sbjct: 211 LYEMLAGQAP 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPR-----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+ R N + +L L I+ ++ + ++R L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR----GLKYIHS- 143
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-M 695
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTG 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 21/221 (9%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKA--KLTSGEILAVKKFHSLWPCEMVPQPEFVN 563
L+ ++ T+G++VK IG+G + K T+ E AVK + +
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXE-FAVKIIDK-------SKRDPTE 64
Query: 564 EIKTLTEL-RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
EI+ L +H +I+ + ++V E + G L + E + V
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA---V 121
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD----YEARVSDFGIAKFLKPDSSNCT 678
+ ++ + Y+H +VHRD+ N+L + R+ DFG AK L+ ++
Sbjct: 122 LFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLX 178
Query: 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE++ CD++S GVL + G P
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + T V T Y APE++ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + T V T Y APE++ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY-TMKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 45/232 (19%)
Query: 515 NGFDV--KYC----IGIGGQGSVYKAKLTS-GEILAVKKFHSLWPCEMVPQPEFVN---- 563
+GFD+ +Y +G GG G V+ A + +A+KK ++ P+ V
Sbjct: 5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI-------VLTDPQSVKHALR 57
Query: 564 EIKTLTELRHRSIVKFY--------------GFCSHPRNSFLVYEYLERGSLATILSNDG 609
EIK + L H +IVK + G + + ++V EY+E LA +L
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGP 116
Query: 610 AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL-CLDYEARVSDFGIAK 668
+EE ++R L Y+H ++HRD+ N+ + D ++ DFG+A+
Sbjct: 117 LLEEHARLFMYQLLR----GLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
Query: 669 FLKPDSS---NCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKG 716
+ P S + +E + T Y +P L+ + T+ D+++ G + E++ G
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S GV+ E+IKG
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + T V T Y APE++ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 101 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 214 QTVDIWSVGCIMAELLTG 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 514 TNGFDVKYCIGIGG-----------QGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
++ +DVK +G G G + AK+ + + L+ + F L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-----------E 53
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
E + +L+H +IV+ + +LV++ + G L + A E ++ +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHC 110
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTE 679
I+ + +++Y H + IVHR++ +N+LL + +++DFG+A + DS
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 166
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
GT GY++PE++ ++ D+++ GV+
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVI 196
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S GV+ E+IKG
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 609 GAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668
G+ + NW ++ +A +SY+ +VHRD++++NVL+ +++DFG+A+
Sbjct: 117 GSQDLLNWCMQ------IAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
Query: 669 FLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRD 721
L D + G ++A E + + T + DV+S+GV E++ G P D
Sbjct: 168 LLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 37/269 (13%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 581 GFCSHPRNSFLVYEYLERG--SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
+ + ++V +E G L + L +I+ + R + +++ A+ +H
Sbjct: 95 DYEITDQYIYMV---MECGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG- 147
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMK 696
IVH D+ N L+ +D ++ DFGIA ++PD + VGT Y+ PE + M
Sbjct: 148 --IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 697 VTEK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRL 745
+ + DV+S G + + G P EI P +
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 746 PTPPQNVQDELISIVEVAFLCLNESPESR 774
P +++QD V CL P+ R
Sbjct: 265 PE--KDLQD-------VLKCCLKRDPKQR 284
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLXGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 178
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 232
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 101 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 214 QTVDIWSVGCIMAELLTG 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 514 TNGFDVKYCIGIGG-----------QGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFV 562
++ +DVK +G G G + AK+ + + L+ + F L
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-----------E 52
Query: 563 NEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNV 622
E + +L+H +IV+ + +LV++ + G L + A E ++ +
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHC 109
Query: 623 IRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTE 679
I+ + +++Y H + IVHR++ +N+LL + +++DFG+A + DS
Sbjct: 110 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 165
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVL 709
GT GY++PE++ ++ D+++ GV+
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVI 195
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 101 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 214 QTVDIWSVGCIMAELLTG 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 109 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 222 QTVDIWSVGCIMAELLTG 239
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 112 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 167
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 224
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 225 QTVDIWSVGCIMAELLTG 242
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 87 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 142
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 200 QTVDIWSVGCIMAELLTG 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ IG G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 108 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 163
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 221 QTVDIWSVGCIMAELLTG 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 582 FCSHPR-----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+ R N + +L L I+ ++ + ++R L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILR----GLKYIHS- 139
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-M 695
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 194
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 195 HYNQTVDIWSVGCIMAELLTG 215
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 158
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 212
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 140
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 198 QTVDIWSVGCIMAELLTG 215
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 86 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 141
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 199 QTVDIWSVGCIMAELLTG 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 86 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 141
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 199 QTVDIWSVGCIMAELLTG 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 100 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 155
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 213 QTVDIWSVGCIMAELLTG 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 69
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 230
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 209 QTVDIWSVGCIMAELLTG 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 70
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 231
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 12 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 68
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 69 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ- 126
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 127 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 229
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 230 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 268
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 207 QTVDIWSVGCIMAELLTG 224
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 152
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 206
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 88 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 143
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 200
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 201 QTVDIWSVGCIMAELLTG 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 571 LRHRSIVKFYGFCSHPRNSFLVYEYLERGSLA-TILSNDGAIEEFNWTVRMNVIRSVANA 629
L+H IV+ S ++V+E+++ L I+ A ++ V + +R + A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGY 686
L Y H + I+HRD+ +NVLL + ++ DFG+A L VGT +
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 687 IAPELVYTMKVTEKCDVYSFGVLALEVIKG 716
+APE+V + DV+ GV+ ++ G
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
L+EE+ + V+ C+ + G Y AK+ + + L+ + L E
Sbjct: 26 LFEELGKGAFSV-VRRCVKVLA-GQEYAAKIINTKKLSARDHQKL-----------EREA 72
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ L+H +IV+ + S + +L+++ + G L + A E ++ + I+
Sbjct: 73 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQ 129
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVG 682
+ A+ + H +VHRD+ +N+LL + +++DFG+A ++ + G
Sbjct: 130 ILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVL 709
T GY++PE++ + D+++ GV+
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVI 213
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 204 QTVDIWSVGCIMAELLTG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 15 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 71
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 72 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 129
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 130 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 232
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 271
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 67
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 228
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 12 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 68
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 69 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 126
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 127 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 229
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 230 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 268
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ T V T Y APE++ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 208 QTVDIWSVGCIMAELLTG 225
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 18 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 74
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 75 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 133 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 235
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 44/229 (19%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYG 581
+G G G+V G +AVK+ + C++ + EIK LTE H +++++Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIRYY- 75
Query: 582 FCSHPRNSFLVYEYLERGSL---ATILSNDGAIEEFNWTVRMN---VIRSVANALSYMHH 635
CS + FL Y LE +L + S + + E N ++R +A+ ++++H
Sbjct: 76 -CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 636 DCFPPIVHRDISSKNVLLCL-------------DYEARVSDFGIAKFLKPDSS----NCT 678
I+HRD+ +N+L+ + +SDFG+ K L S N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 679 ELVGTFGYIAPELV-------YTMKVTEKCDVYSFGVLALEVI-KGDHP 719
GT G+ APEL+ ++T D++S G + ++ KG HP
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 70
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 231
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 26/205 (12%)
Query: 523 IGIGGQGSVYKA----KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK 578
IG G G V A + T I + F C+ + EI+ L RH +++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT-----LREIQILLRFRHENVIG 105
Query: 579 FYGFCSHP-----RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
R+ ++V + +E + S + + + + + L Y+
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYI 160
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNC---TELVGTFGYIAPE 690
H ++HRD+ N+L+ + ++ DFG+A+ P+ + TE V T Y APE
Sbjct: 161 HS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 691 LVYTMK-VTEKCDVYSFGVLALEVI 714
++ K T+ D++S G + E++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 144
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 198
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 17 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 73
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 74 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 131
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 132 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 234
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 235 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 273
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 67
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 228
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 178
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GATWTLCGTPEYLAPEIIL 232
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
+HRD++++N+LL ++ DFG+A+ + PD + ++APE ++ T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 700 KCDVYSFGVLALEVI 714
+ DV+SFGVL E+
Sbjct: 275 QSDVWSFGVLLWEIF 289
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 515 NGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N F V IG GG G VY K +G++ A+K + +NE L+ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 574 RS----IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANA 629
+ Y F + + SF++ + + G L LS G E + +
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILG 303
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA---KFLKPDSSNCTELVGTFGY 686
L +MH+ +V+RD+ N+LL R+SD G+A KP +S VGT GY
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGY 355
Query: 687 IAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHP 719
+APE++ + D +S G + ++++G P
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 70
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 231
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 515 NGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N F V IG GG G VY K +G++ A+K + +NE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 574 RS----IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANA 629
+ Y F + + SF++ + + G L LS G E + +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILG 304
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA---KFLKPDSSNCTELVGTFGY 686
L +MH+ +V+RD+ N+LL R+SD G+A KP +S VGT GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGY 356
Query: 687 IAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHP 719
+APE++ + D +S G + ++++G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
FLV++ +++G L L+ + E M + V AL ++ IVHRD+ +
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPE 153
Query: 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK------VTEKCDV 703
N+LL D +++DFG + L P + GT Y+APE++ ++ D+
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDP-GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 704 YSFGVLALEVIKGDHP 719
+S GV+ ++ G P
Sbjct: 213 WSTGVIMYTLLAGSPP 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
+HRD++++N+LL ++ DFG+A+ + PD + ++APE ++ T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 700 KCDVYSFGVLALEVI 714
+ DV+SFGVL E+
Sbjct: 282 QSDVWSFGVLLWEIF 296
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
+HRD++++N+LL ++ DFG+A+ + PD + ++APE ++ T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 700 KCDVYSFGVLALEVI 714
+ DV+SFGVL E+
Sbjct: 280 QSDVWSFGVLLWEIF 294
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 606 SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
N G+ NW V+ +A ++Y+ +VHRD++++NVL+ +++DFG
Sbjct: 119 DNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 666 IAKFLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722
+AK L + G ++A E + T + DV+S+GV E++ G P D
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD- 228
Query: 723 XXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 --------GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 8 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 64
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 65 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 122
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 123 -----IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 225
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 226 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 264
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
+HRD++++N+LL ++ DFG+A+ + PD + ++APE ++ T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 700 KCDVYSFGVLALEVI 714
+ DV+SFGVL E+
Sbjct: 273 QSDVWSFGVLLWEIF 287
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 36 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 92
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 93 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 150
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 151 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 253
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 254 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 292
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 109 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + V T Y APE++ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX---VATRWYRAPEIMLNWMHYN 221
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 222 QTVDIWSVGCIMAELLTG 239
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 69
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 230
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD--YEARVSDFGIAK-FLKPDSSN- 676
N++R + +AL Y+H+ I HRDI +N L + +E ++ DFG++K F K ++
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 677 --CTELVGTFGYIAPELVYTMKVT--EKCDVYSFGVLALEVIKGDHP 719
T GT ++APE++ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 606 SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
N G+ NW V+ +A ++Y+ +VHRD++++NVL+ +++DFG
Sbjct: 119 DNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 666 IAKFLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722
+AK L + G ++A E + T + DV+S+GV E++ G P D
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD- 228
Query: 723 XXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 --------GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 67
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 228
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 512 RATNGFDVKYCIGIGGQGSVYK--AKLTSGEILA--VKKFHSLWPCEMVPQPEFVNEIKT 567
+ + +D+ +G G V K K T E A +KK S V + E E+
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
L ++ H +I+ + + + L+ E + G L L+ ++ E T + I+ +
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQIL 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDY-----EARVSDFGIAKFLKPDSSNCTELVG 682
+ ++Y+H I H D+ +N++L LD ++ DFG+A ++ D + G
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFG 180
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
T ++APE+V + + D++S GV+ ++ G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 515 NGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N F V IG GG G VY K +G++ A+K + +NE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 574 RS----IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANA 629
+ Y F + + SF++ + + G L LS G E + +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILG 304
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA---KFLKPDSSNCTELVGTFGY 686
L +MH+ +V+RD+ N+LL R+SD G+A KP +S VGT GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGY 356
Query: 687 IAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHP 719
+APE++ + D +S G + ++++G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 515 NGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
N F V IG GG G VY K +G++ A+K + +NE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 574 RS----IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANA 629
+ Y F + + SF++ + + G L LS G E + +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILG 304
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA---KFLKPDSSNCTELVGTFGY 686
L +MH+ +V+RD+ N+LL R+SD G+A KP +S VGT GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGY 356
Query: 687 IAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHP 719
+APE++ + D +S G + ++++G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPR-----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD 636
+ R N + +L L I+ + ++ + ++R L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILR----GLKYIHS- 143
Query: 637 CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-M 695
I+HRD+ N+ + D E ++ DFG+ + T V T Y APE++ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 696 KVTEKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTG 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 37/269 (13%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFY 580
IG GG V++ +I A+K + +L + + NEI L +L+ S I++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 581 GFCSHPRNSFLVYEYLERG--SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF 638
+ +Y +E G L + L +I+ + R + +++ A+ +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIHQHG- 175
Query: 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE--LVGTFGYIAPELVYTMK 696
IVH D+ N L+ +D ++ DFGIA ++PD+++ + VG Y+ PE + M
Sbjct: 176 --IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 697 VTEK-----------CDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXXXXXXEILDPRL 745
+ + DV+S G + + G P EI P +
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 746 PTPPQNVQDELISIVEVAFLCLNESPESR 774
P +++QD V CL P+ R
Sbjct: 293 PE--KDLQD-------VLKCCLKRDPKQR 312
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 5 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 61
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 62 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 119
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 120 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 222
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 223 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 261
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 606 SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
N G+ NW V+ +A ++Y+ +VHRD++++NVL+ +++DFG
Sbjct: 112 DNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 666 IAKFLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722
+AK L + G ++A E + T + DV+S+GV E++ G P D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD- 221
Query: 723 XXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 222 --------GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 510 IVRATNGFDVKYCIGIG--GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
I+ ++ +++ IG G G + + K + E++AVK + + E +N
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDK-QANELVAVKYIERGEKIDENVKREIINH--- 69
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
LRH +IV+F P + +V EY G L + N G E + +
Sbjct: 70 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF---FFQQLI 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR--VSDFGIAK----FLKPDSSNCTELV 681
+ +SY H + HRD+ +N LL R ++DFG +K +P S+ V
Sbjct: 126 SGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----V 177
Query: 682 GTFGYIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHP 719
GT YIAPE++ + K DV+S GV ++ G +P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 606 SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
N G+ NW V+ +A ++Y+ +VHRD++++NVL+ +++DFG
Sbjct: 146 DNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 196
Query: 666 IAKFLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722
+AK L + G ++A E + T + DV+S+GV E++ G P D
Sbjct: 197 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD- 255
Query: 723 XXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 256 --------GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 301
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 89 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S TE T Y+APE++ K + CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 707 GVL 709
GV+
Sbjct: 204 GVI 206
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 40/225 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYG 581
+G G G+V G +AVK+ + C++ + EIK LTE H +++++Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIRYY- 93
Query: 582 FCSHPRNSFLVYEYLERGSL---ATILSNDGAIEEFNWTVRMN---VIRSVANALSYMHH 635
CS + FL Y LE +L + S + + E N ++R +A+ ++++H
Sbjct: 94 -CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 636 DCFPPIVHRDISSKNVLLCL-------------DYEARVSDFGIAKFLKPDS----SNCT 678
I+HRD+ +N+L+ + +SDFG+ K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 679 ELVGTFGYIAPELV---YTMKVTEKCDVYSFGVLALEVI-KGDHP 719
GT G+ APEL+ ++T D++S G + ++ KG HP
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+++ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIII 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 642 VHRDISSKNVLLCLDYEARVSDFGIAK--FLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
+HRD++++N+LL + ++ DFG+A+ + PD + ++APE ++ +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 700 KCDVYSFGVLALEVI 714
K DV+S+GVL E+
Sbjct: 281 KSDVWSYGVLLWEIF 295
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 42/288 (14%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRS 575
+G G G V +A K + +AVK + + ++E+K L+ L H +
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLSYLGNHMN 111
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATIL--SNDGAIEEFNWTVRMNVIR--------- 624
IV G C+ + ++ EY G L L D I M
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 625 ----SVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
VA ++++ +C +HRD++++N+LL ++ DFG+A+ +K DS+ +
Sbjct: 172 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXX 736
++APE ++ T + DV+S+G+ E+ G P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-------YPGMPVDSKF 280
Query: 737 XXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
I + P++ E+ I++ C + P RP + QL+
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 325
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 40/225 (17%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYG 581
+G G G+V G +AVK+ + C++ + EIK LTE H +++++Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIRYY- 93
Query: 582 FCSHPRNSFLVYEYLERGSL---ATILSNDGAIEEFNWTVRMN---VIRSVANALSYMHH 635
CS + FL Y LE +L + S + + E N ++R +A+ ++++H
Sbjct: 94 -CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 636 DCFPPIVHRDISSKNVLLCL-------------DYEARVSDFGIAKFLKPDS----SNCT 678
I+HRD+ +N+L+ + +SDFG+ K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 679 ELVGTFGYIAPELV---YTMKVTEKCDVYSFGVLALEVI-KGDHP 719
GT G+ APEL+ ++T D++S G + ++ KG HP
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 158
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 212
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL ++ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ D+G+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 42/288 (14%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRS 575
+G G G V +A K + +AVK + + ++E+K L+ L H +
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLSYLGNHMN 88
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATIL--SNDGAIEEFNWTVRMNVIR--------- 624
IV G C+ + ++ EY G L L D I M
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 625 ----SVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
VA ++++ +C +HRD++++N+LL ++ DFG+A+ +K DS+ +
Sbjct: 149 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXX 736
++APE ++ T + DV+S+G+ E+ G P
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-------YPGMPVDSKF 257
Query: 737 XXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
I + P++ E+ I++ C + P RP + QL+
Sbjct: 258 YKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 302
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 158
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 212
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 158
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEYLAPEIIL 212
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 143
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEYLAPEIIL 197
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 606 SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
N G+ NW V+ +A ++Y+ +VHRD++++NVL+ +++DFG
Sbjct: 112 DNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 666 IAKFLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRD 721
+AK L + G ++A E + T + DV+S+GV E++ G P D
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 105 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 160
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 219
Query: 707 GVL 709
GV+
Sbjct: 220 GVI 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 70
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 71 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 129 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRD 721
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 42/288 (14%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRS 575
+G G G V +A K + +AVK + + ++E+K L+ L H +
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLSYLGNHMN 106
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATIL--SNDGAIEEFNWTVRMNVIR--------- 624
IV G C+ + ++ EY G L L D I M
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 625 ----SVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
VA ++++ +C +HRD++++N+LL ++ DFG+A+ +K DS+ +
Sbjct: 167 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXX 736
++APE ++ T + DV+S+G+ E+ G P
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-------YPGMPVDSKF 275
Query: 737 XXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
I + P++ E+ I++ C + P RP + QL+
Sbjct: 276 YKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 320
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 112 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 167
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DFG+A+ + V T Y APE++ M
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVATRWYRAPEIMLNWMHYN 224
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 225 QTVDIWSVGCIMAELLTG 242
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 510 IVRATNGFDVKYCIGIG--GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
I+ ++ +++ IG G G + + K S E++AVK + + E +N
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDENVKREIINH--- 68
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
LRH +IV+F P + +V EY G L + N G E + +
Sbjct: 69 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF---FFQQLI 124
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR--VSDFGIAK----FLKPDSSNCTELV 681
+ +SY H + HRD+ +N LL R + DFG +K +P S+ V
Sbjct: 125 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----V 176
Query: 682 GTFGYIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHP 719
GT YIAPE++ + K DV+S GV ++ G +P
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 12/221 (5%)
Query: 500 TFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVPQ 558
TF + L + I + +G G GSV + + SG +AVKK + ++
Sbjct: 36 TFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQS-IIHA 94
Query: 559 PEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNW 616
E++ L ++H +++ + P S + YL + L+N ++
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFT-PATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 153
Query: 617 TVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN 676
+I + L Y+H I+HRD+ N+ + D E ++ DFG+A+
Sbjct: 154 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 207
Query: 677 CTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKG 716
T V T Y APE++ M D++S G + E++ G
Sbjct: 208 MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 21 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 77
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 78 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 135
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG+AK L +
Sbjct: 136 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRD 721
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 97 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 152
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 211
Query: 707 GVL 709
GV+
Sbjct: 212 GVI 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 69
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG AK L +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 230
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 135 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 650 NVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 249
Query: 707 GVL 709
GV+
Sbjct: 250 GVI 252
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 42/288 (14%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRS 575
+G G G V +A K + +AVK + + ++E+K L+ L H +
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLSYLGNHMN 104
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATIL--SNDGAIEEFNWTVRMNVIR--------- 624
IV G C+ + ++ EY G L L D I M
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 625 ----SVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
VA ++++ +C +HRD++++N+LL ++ DFG+A+ +K DS+ +
Sbjct: 165 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXX 736
++APE ++ T + DV+S+G+ E+ G P
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-------YPGMPVDSKF 273
Query: 737 XXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
I + P++ E+ I++ C + P RP + QL+
Sbjct: 274 YKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 318
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+++ +V+DFG+AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 42/288 (14%)
Query: 523 IGIGGQGSVYKA------KLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRS 575
+G G G V +A K + +AVK + + ++E+K L+ L H +
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP--SAHLTEREALMSELKVLSYLGNHMN 111
Query: 576 IVKFYGFCSHPRNSFLVYEYLERGSLATIL--SNDGAIEEFNWTVRMNVIR--------- 624
IV G C+ + ++ EY G L L D I M
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 625 ----SVANALSYM-HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
VA ++++ +C +HRD++++N+LL ++ DFG+A+ +K DS+ +
Sbjct: 172 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 680 LVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXX 736
++APE ++ T + DV+S+G+ E+ G P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-------YPGMPVDSKF 280
Query: 737 XXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784
I + P++ E+ I++ C + P RP + QL+
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 325
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 141 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 650 NVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 255
Query: 707 GVL 709
GV+
Sbjct: 256 GVI 258
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 95 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 150
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 209
Query: 707 GVL 709
GV+
Sbjct: 210 GVI 212
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 15 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 71
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 72 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 129
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG AK L +
Sbjct: 130 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 232
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 271
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 24/174 (13%)
Query: 563 NEIKTLTELR-HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
E++ L + + HR++++ F +LV+E + GS ILS+ FN
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASV 115
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSDFGIAKFLKPDSSNCT 678
V++ VA+AL ++H+ I HRD+ +N+L + ++ DFG+ +K + +C+
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN-GDCS 171
Query: 679 EL--------VGTFGYIAPELVYTMK-----VTEKCDVYSFGVLALEVIKGDHP 719
+ G+ Y+APE+V ++CD++S GV+ ++ G P
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 96 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 151
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 210
Query: 707 GVL 709
GV+
Sbjct: 211 GVI 213
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ +++ IG G G V A+ +G+ +A+KK + + + + E+K L +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKH 113
Query: 574 RSIVKF---------YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
+I+ YG ++ ++V + +E I S+ E ++R
Sbjct: 114 DNIIAIKDILRPTVPYGEF---KSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN----CTEL 680
L YMH ++HRD+ N+L+ + E ++ DFG+A+ L + TE
Sbjct: 171 ----GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 681 VGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVI 714
V T Y APEL+ ++ + T+ D++S G + E++
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 562 VNEIKTLTELRHRSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+NE + L + +VK Y F + N ++V EY+ G + + L G E + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARF 145
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 146 YAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXL 198
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ +++ IG G G V A+ +G+ +A+KK + + + + E+K L +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKH 112
Query: 574 RSIVKF---------YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIR 624
+I+ YG ++ ++V + +E I S+ E ++R
Sbjct: 113 DNIIAIKDILRPTVPYGEF---KSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN----CTEL 680
L YMH ++HRD+ N+L+ + E ++ DFG+A+ L + TE
Sbjct: 170 ----GLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 681 VGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVI 714
V T Y APEL+ ++ + T+ D++S G + E++
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 89 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 203
Query: 707 GVL 709
GV+
Sbjct: 204 GVI 206
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 91 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 707 GVL 709
GV+
Sbjct: 206 GVI 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 606 SNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665
N G+ NW V+ +A ++Y+ +VHRD++++NVL+ +++DFG
Sbjct: 119 DNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 666 IAKFLKPDSSNCTELVGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722
AK L + G ++A E + T + DV+S+GV E++ G P D
Sbjct: 170 RAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD- 228
Query: 723 XXXXXXXXXXXXXXXXEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 --------GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY+ G + + L G E + R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFY 167
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 168 AAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLC 220
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 562 VNEIKTLTELRHRSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+NE + L + +VK Y F + N ++V EY+ G + + L G E + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARF 145
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 146 YAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXL 198
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 562 VNEIKTLTELRHRSIVKF-YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
+NE + L + +VK Y F + N ++V EY+ G + + L G E + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARF 145
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 146 YAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXL 198
Query: 681 VGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 90 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 204
Query: 707 GVL 709
GV+
Sbjct: 205 GVI 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY+ G + + L G E + R
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFY 139
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 140 AAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLC 192
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 44/229 (19%)
Query: 523 IGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYG 581
+G G G+V G +AVK+ + C++ + EIK LTE H +++++Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIRYY- 75
Query: 582 FCSHPRNSFLVYEYLERGSL---ATILSNDGAIEEFNWTVRMN---VIRSVANALSYMHH 635
CS + FL Y LE +L + S + + E N ++R +A+ ++++H
Sbjct: 76 -CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 636 DCFPPIVHRDISSKNVLLCL-------------DYEARVSDFGIAKFLKPDS----SNCT 678
I+HRD+ +N+L+ + +SDFG+ K L N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 679 ELVGTFGYIAPELV-------YTMKVTEKCDVYSFGVLALEVI-KGDHP 719
GT G+ APEL+ ++T D++S G + ++ KG HP
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY+ G + + L G E + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFY 147
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 148 AAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLC 200
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 67
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 68 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG AK L +
Sbjct: 126 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFXXXXXXXXXXXXXXX 737
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEI 228
Query: 738 XEILDP--RLPTPPQNVQDELISIVEVAFLCLNESPESR 774
IL+ RLP PP D + +V+ + + P+ R
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 510 IVRATNGFDVKYCIGIG--GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
I+ ++ +++ IG G G + + K S E++AVK + E +N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDK-QSNELVAVKYIERGEKIAANVKREIINH--- 69
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
LRH +IV+F P + +V EY G L + N G E + +
Sbjct: 70 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF---FFQQLI 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR--VSDFGIAK----FLKPDSSNCTELV 681
+ +SY H + HRD+ +N LL R + DFG +K +P S+ V
Sbjct: 126 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----V 177
Query: 682 GTFGYIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHP 719
GT YIAPE++ + K DV+S GV ++ G +P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY+ G + + L G E + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFY 147
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 148 AAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLC 200
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+++ +V+DFG+AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY+ G + + L G E + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFY 147
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 148 AAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLC 200
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F +++S+ A+ Y+H I HRD+ +
Sbjct: 91 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 650 NVLLCLDYE---ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 707 GVL 709
GV+
Sbjct: 206 GVI 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY+ G + + L G E + R
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFY 139
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K L
Sbjct: 140 AAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLC 192
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+++ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ DF +A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT Y+AP ++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPAIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+++ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKAKLTS--GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
+G G G VY+ T+ GE + V C + + +F++E + L H IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH-DC 637
G ++++ E G L L + + V V+ S + A++Y+ +C
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESINC 146
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS---SNCTELVGTFGYIAPELVYT 694
VHRDI+ +N+L+ ++ DFG++++++ + ++ T L +++PE +
Sbjct: 147 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINF 200
Query: 695 MKVTEKCDVYSFGVLALEVIK-GDHP 719
+ T DV+ F V E++ G P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ E+V + Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 576 IVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
I+ Y H + L+ E +E G L + + G + F ++R + A+ ++H
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLH 145
Query: 635 -HDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAKFLKPDSSNCTEL-VGTFGYIAP 689
H+ I HRD+ +N+L D +++DFG F K + N + T Y+AP
Sbjct: 146 SHN----IAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYYVAP 198
Query: 690 ELVYTMKVTEKCDVYSFGVL 709
E++ K + CD++S GV+
Sbjct: 199 EVLGPEKYDKSCDMWSLGVI 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKAKLTS--GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
+G G G VY+ T+ GE + V C + + +F++E + L H IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH-DC 637
G ++++ E G L L + + V V+ S + A++Y+ +C
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESINC 134
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS---SNCTELVGTFGYIAPELVYT 694
VHRDI+ +N+L+ ++ DFG++++++ + ++ T L +++PE +
Sbjct: 135 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINF 188
Query: 695 MKVTEKCDVYSFGVLALEVIK-GDHP 719
+ T DV+ F V E++ G P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ F+ +G G G V K + +G A+K ++ +NE + L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+++ +V+DFG AK +K L GT Y+APE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 523 IGIGGQGSVYKAKLTS--GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFY 580
+G G G VY+ T+ GE + V C + + +F++E + L H IVK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 581 GFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS--VANALSYMHH-DC 637
G ++++ E G L L + + V V+ S + A++Y+ +C
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESINC 130
Query: 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS---SNCTELVGTFGYIAPELVYT 694
VHRDI+ +N+L+ ++ DFG++++++ + ++ T L +++PE +
Sbjct: 131 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINF 184
Query: 695 MKVTEKCDVYSFGVLALEVIK-GDHP 719
+ T DV+ F V E++ G P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 522 CIGIGGQGSVYKAKLTSGEIL-AVKKFHSLWPCEMVPQPEFVNEIKTLTE-LRHRSIVKF 579
IG G G V A+ + E+ AVK + + ++E L + ++H +V
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ + V +Y+ G L L + E +A+AL Y+H
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGYLHSLN-- 159
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTE 699
IV+RD+ +N+LL ++DFG+ K +S + GT Y+APE+++
Sbjct: 160 -IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
Query: 700 KCDVYSFGVLALEVIKG 716
D + G + E++ G
Sbjct: 219 TVDWWCLGAVLYEMLYG 235
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 576 IVKFYGFCSHPRNSFLV-YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH 634
I+ Y H + L+ E +E G L + + G + F ++R + A+ ++H
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLH 126
Query: 635 -HDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAKFLKPDSSNCTEL-VGTFGYIAP 689
H+ I HRD+ +N+L D +++DFG F K + N + T Y+AP
Sbjct: 127 SHN----IAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYYVAP 179
Query: 690 ELVYTMKVTEKCDVYSFGVL 709
E++ K + CD++S GV+
Sbjct: 180 EVLGPEKYDKSCDMWSLGVI 199
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 103 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 155
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 156 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213
Query: 718 HP 719
P
Sbjct: 214 SP 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 69
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG AK L +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRD 721
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 561 FVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
F +++L H+ +V YG C + LV E+++ GSL T L + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA--------RVSDFGIAKFLKP 672
V + +A A+ ++ + ++H ++ +KN+LL + + ++SD GI+ + P
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 673 DSSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIK-GDHP 719
L ++ PE + K + D +SFG E+ GD P
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 207 VDIWSVGCIMGEMIKG 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN 615
V + + E+ L E++H +++ + + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-----RVSDFGIAKFL 670
T ++ + N + Y+H I H D+ +N++L LD ++ DFG+A
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 671 KPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
K D N + GT ++APE+V + + D++S GV+ ++ G P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN 615
V + + E+ L E++H +++ + + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-----RVSDFGIAKFL 670
T ++ + N + Y+H I H D+ +N++L LD ++ DFG+A
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 671 KPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
K D N + GT ++APE+V + + D++S GV+ ++ G P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S T V T Y APE++ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN 615
V + + E+ L E++H +++ + + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-----RVSDFGIAKFL 670
T ++ + N + Y+H I H D+ +N++L LD ++ DFG+A
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 671 KPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
K D N + GT ++APE+V + + D++S GV+ ++ G P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 556 VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFN 615
V + + E+ L E++H +++ + + + L+ E + G L L+ ++ E
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA-----RVSDFGIAKFL 670
T ++ + N + Y+H I H D+ +N++L LD ++ DFG+A
Sbjct: 115 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 165
Query: 671 KPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
K D N + GT ++APE+V + + D++S GV+ ++ G P
Sbjct: 166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 523 IGIGGQGSVYK-AKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS----IV 577
IG G GSV K SG+I+AVK+ S V + E + L + S IV
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRS-----TVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 578 KFYGFCSHPRNSFLVYEYLERG-----SLATILSNDGAIEEFNWTVRMNVIRSVANALSY 632
+FYG + ++ E + + +D EE + + ++ AL++
Sbjct: 85 QFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK----ALNH 140
Query: 633 MHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV 692
+ + I+HRDI N+LL ++ DFGI+ L DS T G Y+APE +
Sbjct: 141 LKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERI 197
Query: 693 YTMKVTE----KCDVYSFGVLALEVIKGDHP 719
+ + DV+S G+ E+ G P
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 625 SVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK-FLKPDSSNCTELVGT 683
VA + Y+ F VHRD++++N +L + +V+DFG+A+ L + + +
Sbjct: 132 QVARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 684 ---FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
+ A E + T + T K DV+SFGVL E++ P
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 510 IVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEIL----AVKKFHSLWPCEMVPQPEFVNE 564
I++ T +K +G G G+VYK + GE + A+K+ E ++E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDE 69
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATIL----SNDGAIEEFNWTVRM 620
+ + + + + G C L+ + + G L + N G+ NW V+
Sbjct: 70 AYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTEL 680
+A ++Y+ +VHRD++++NVL+ +++DFG AK L +
Sbjct: 128 -----IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 681 VGT--FGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRD 721
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSK 649
+V E L+ G L + + + G + F + +S+ A+ Y+H I HRD+ +
Sbjct: 135 LIVXECLDGGELFSRIQDRGD-QAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 650 NVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSF 706
N+L +++DFG AK +S T + Y+APE++ K + CD +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWSL 249
Query: 707 GVL 709
GV+
Sbjct: 250 GVI 252
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ D G+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ FG+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 567 TLTELRHRSIVKF-------YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVR 619
TL E R + V F + F + N ++V EY G + + L G E + R
Sbjct: 89 TLNEKRIQQAVNFPFLVKLEFSFKDNS-NLYMVLEYAPGGEMFSHLRRIGRFSEPH--AR 145
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTE 679
+ V Y+H +++RD+ +N+L+ +V+DFG AK +K
Sbjct: 146 FYAAQIVL-TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---GRTWX 198
Query: 680 LVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
L GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 515 NGFDVKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH 573
+ FD +G G G V K SG A+K ++ +NE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
+VK N ++V EY+ G + + L G E + R + V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYL 157
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVY 693
H +++RD+ +N+L+ +V+DFG AK +K L GT +APE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEALAPEIIL 211
Query: 694 TMKVTEKCDVYSFGVLALEVIKGDHP 719
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 562 VNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
+NE + L + +VK N ++V EY G + + L G E + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFY 147
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELV 681
+ V Y+H +++RD+ +N+++ +V+DFG AK +K L
Sbjct: 148 AAQIVL-TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---GRTWXLC 200
Query: 682 GTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
GT Y+APE++ + + D ++ GVL E+ G P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ D G+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 576 IVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVIRSVANA 629
+++ + P + L+ E +E L ++ GA++E F W V + +R
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 130
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVGTFGYIA 688
H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ GT Y
Sbjct: 131 -----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSP 181
Query: 689 PELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
PE + Y V+S G+L +++ GD P
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 544 VKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLAT 603
+KK + V + + E+ L E++H +++ + + + L+ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 604 ILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---- 659
L+ ++ E T ++ + N + Y+H I H D+ +N++L LD
Sbjct: 104 FLAEKESLTEEEAT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPR 156
Query: 660 -RVSDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGD 717
++ DFG+A K D N + GT ++APE+V + + D++S GV+ ++ G
Sbjct: 157 IKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 718 HP 719
P
Sbjct: 215 SP 216
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 561 FVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRM 620
F +++L H+ +V YG C + LV E+++ GSL T L + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 621 NVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA--------RVSDFGIAKFLKP 672
V + +A A+ ++ + ++H ++ +KN+LL + + ++SD GI+ + P
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 673 DSSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIK-GDHP 719
L ++ PE + K + D +SFG E+ GD P
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDIS 647
N ++V EY G + + L G E + R + V Y+H +++RD+
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYLHS---LDLIYRDLK 169
Query: 648 SKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFG 707
+N+++ +V+DFG AK +K L GT Y+APE++ + + D ++ G
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 708 VLALEVIKGDHP 719
VL E+ G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDIS 647
N ++V EY G + + L G E + R + V Y+H +++RD+
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVL-TFEYLHS---LDLIYRDLK 169
Query: 648 SKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFG 707
+N+++ +V+DFG AK +K L GT Y+APE++ + + D ++ G
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 708 VLALEVIKGDHP 719
VL E+ G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVT 698
I+HRD+ N+++ D ++ DFG+A+ S+N T V T Y APE++ M
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 699 EKCDVYSFGVLALEVIKG 716
E D++S G + E++KG
Sbjct: 202 ENVDIWSVGCIMGELVKG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 523 IGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYG 581
+G G GSV A T +G +AVKK + ++ E++ L ++H +++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 582 FCSHPRNSFLVYE--YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFP 639
+ P S + YL + L+N ++ +I + L Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 640 PIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVT 698
I+HRD+ N+ + D E ++ D G+A+ T V T Y APE++ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 699 EKCDVYSFGVLALEVIKG 716
+ D++S G + E++ G
Sbjct: 202 QTVDIWSVGCIMAELLTG 219
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDIS 647
N ++V EY G + + L G E + R + V Y+H +++RD+
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFXEPH--ARFYAAQIVL-TFEYLHS---LDLIYRDLK 169
Query: 648 SKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFG 707
+N+++ +V+DFG AK +K L GT Y+APE++ + + D ++ G
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 708 VLALEVIKGDHP 719
VL E+ G P
Sbjct: 227 VLIYEMAAGYPP 238
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 641 IVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEK 700
I+HRD+ N+++ D ++ DFG+A+ S V T Y APE++ M E
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 701 CDVYSFGVLALEVIKG 716
D++S G + E+IKG
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 78 SLSTLDLSKNKLNGSIPFS--FGNLTNLA-IMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
SL LDLS NG I S F L L + + + N S V +L+ L +LD+S
Sbjct: 398 SLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 454
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGS-IPSIIGNLKSLFYLHLSSNQLSGSIPISL 193
+ LS+L VL + GNS + +P I L++L +L LS QL P +
Sbjct: 455 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514
Query: 194 GNLSNLVVLHLFENSLFG 211
+LS+L VL++ N+ F
Sbjct: 515 NSLSSLQVLNMSHNNFFS 532
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 330 FRKGF-PVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEG 388
F++ F P +L L+ LDLS LE P ++ SL+ LN+SHNNF L ++
Sbjct: 481 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 540
Query: 389 MHGLSCIDVSYNEL 402
++ L +D S N +
Sbjct: 541 LNSLQVLDYSLNHI 554
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 266 IGKLSSLNYLVLNGNQLYG-NLPRALGSLTELEYLDLSTNKL 306
IG L +L L + N + LP +LT LE+LDLS+NK+
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 563 NEIKTLTELRHRSIVKFYG--FCSHPRNSFLVYEYLERGSLATILSNDGAIEE-FNWTVR 619
EI+ L LRH+++++ + + ++V EY G + D E+ F
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPEKRFPVCQA 111
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--C 677
+ + L Y+H IVH+DI N+LL ++S G+A+ L P +++ C
Sbjct: 112 HGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 678 TELVGTFGYIAPELVYTMKVTE--KCDVYSFGVLALEVIKGDHP 719
G+ + PE+ + K D++S GV + G +P
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 48/251 (19%)
Query: 499 LTFEGKILYEEIVRATNGFDVKYCIGIGGQGSVYKA-KLTSGEILAVKKFHSLWPCEMVP 557
L F+G I+ V+ + +++K+ IG G G VY A + + +A+KK + ++ +++
Sbjct: 14 LYFQGAIIKN--VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFE-DLID 70
Query: 558 QPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILS-NDGAIEEFNW 616
+ EI L L+ I++ + + + L+ L +L D +++
Sbjct: 71 CKRILREITILNRLKSDYIIRLHDL-------IIPEDLLKFDELYIVLEIADSDLKKLFK 123
Query: 617 T----VRMNVIRSVANAL---SYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669
T +V + N L ++H I+HRD+ N LL D ++ DFG+A+
Sbjct: 124 TPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLART 180
Query: 670 LKPDSS-------------------------NCTELVGTFGYIAPELVYTMK-VTEKCDV 703
+ D T V T Y APEL+ + T D+
Sbjct: 181 INSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDI 240
Query: 704 YSFGVLALEVI 714
+S G + E++
Sbjct: 241 WSTGCIFAELL 251
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 111
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 170
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 171 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 218
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 78 SLSTLDLSKNKLNGSIPFS--FGNLTNLA-IMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
SL LDLS NG I S F L L + + + N S V +L+ L +LD+S
Sbjct: 374 SLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGS-IPSIIGNLKSLFYLHLSSNQLSGSIPISL 193
+ LS+L VL + GNS + +P I L++L +L LS QL P +
Sbjct: 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 490
Query: 194 GNLSNLVVLHLFENSLFG 211
+LS+L VL++ N+ F
Sbjct: 491 NSLSSLQVLNMSHNNFFS 508
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 330 FRKGF-PVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEG 388
F++ F P +L L+ LDLS LE P ++ SL+ LN+SHNNF L ++
Sbjct: 457 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 516
Query: 389 MHGLSCIDVSYNEL 402
++ L +D S N +
Sbjct: 517 LNSLQVLDYSLNHI 530
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 266 IGKLSSLNYLVLNGNQLYG-NLPRALGSLTELEYLDLSTNKL 306
IG L +L L + N + LP +LT LE+LDLS+NK+
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVK---KFHSLWPCEMVPQPEFVNE 564
E++V N + +G G GSV + L + ++K K L EF++E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 565 IKTLTELRHRSIVKFYGFCSHPRNS-----FLVYEYLERGSLATIL---SNDGAIEEFNW 616
+ + H ++++ G C + ++ +++ G L T L + +
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 617 TVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN 676
+ + +A + Y+ + F +HRD++++N +L D V+DFG++K +
Sbjct: 147 QTLLKFMVDIALGMEYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY 203
Query: 677 CTELVGTF--GYIAPELVYTMKVTEKCDVYSFGVLALEV 713
+ +IA E + T K DV++FGV E+
Sbjct: 204 RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 116
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 175
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 176 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 223
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 97
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 157 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 97
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 157 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 620 MNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY---EARVSDFGIAKFLKPDSSN 676
+ +I+ + + Y+H + IVH D+ +N+LL Y + ++ DFG+++ + +
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACE 189
Query: 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719
E++GT Y+APE++ +T D+++ G++A ++ P
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 97
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 157 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 96
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 156 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 111
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 170
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 171 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 218
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 96
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 156 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 53 GIQCNPAKRVI-----SINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMY 107
G CN K+ + S++ G+ + + L DL L +F LT L +
Sbjct: 9 GCTCNEGKKEVDCQGKSLDSVPSGIPADTEKL---DLQSTGLATLSDATFRGLTKLTWLN 65
Query: 108 LYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPS 167
L N L V +L L L L+ NQL+ +L+ L L+L GN L S+PS
Sbjct: 66 LDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPS 124
Query: 168 -IIGNLKSLFYLHLSSNQLSGSIPI-SLGNLSNLVVLHLFENSLFGSIP 214
+ L L L L++NQL SIP + L+NL L L N L S+P
Sbjct: 125 GVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSVP 171
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 69 TVGLKGNLKSLSTLDLSKNKLNGSIPFS-FGNLTNLAIMYLYRNSLSASIPPVIGNLKFL 127
+ G+ +L L TL L+ N+L S+P F +LT L +YL N L + V L L
Sbjct: 75 SAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL 133
Query: 128 YHLDLSENQLSGSIPP-TLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLS 186
L L+ NQL SIP L+NL L L N L L L + L NQ
Sbjct: 134 KELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Query: 187 GS 188
S
Sbjct: 193 CS 194
Score = 32.7 bits (73), Expect = 0.80, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 52/183 (28%)
Query: 130 LDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSI 189
LDL L+ T L+ L L+L N L + +L L L L++NQL+ S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 190 PISL-GNLSNLVVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXX 248
P+ + +L+ L L+L N L S+PS GV
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQL-KSLPS-------------------GVF----------- 127
Query: 249 XXXXXXXQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGN 308
+L+ L L LN NQL A LT L+ L LSTN+L
Sbjct: 128 ------------------DRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL-Q 168
Query: 309 SIP 311
S+P
Sbjct: 169 SVP 171
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 269 LSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXXXXXX 328
L+ L +L L+ NQL LTEL L L+ N+L S+P
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 329 QFRKGFPVEL-EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFE 387
K P + ++L +L EL L+ N L+ + +L+ L+LS N + F+
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 388 GMHGLSCIDVSYNEL 402
+ L I + N+
Sbjct: 177 RLGKLQTITLFGNQF 191
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 53 GIQCNPAKRVI-----SINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMY 107
G CN K+ + S++ G+ + + L DL L +F LT L +
Sbjct: 9 GCTCNEGKKEVDCQGKSLDSVPSGIPADTEKL---DLQSTGLATLSDATFRGLTKLTWLN 65
Query: 108 LYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPS 167
L N L V +L L L L+ NQL+ +L+ L L+L GN L S+PS
Sbjct: 66 LDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPS 124
Query: 168 -IIGNLKSLFYLHLSSNQLSGSIPI-SLGNLSNLVVLHLFENSLFGSIP 214
+ L L L L++NQL SIP + L+NL L L N L S+P
Sbjct: 125 GVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSVP 171
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 69 TVGLKGNLKSLSTLDLSKNKLNGSIPFS-FGNLTNLAIMYLYRNSLSASIPPVIGNLKFL 127
+ G+ +L L TL L+ N+L S+P F +LT L +YL N L + V L L
Sbjct: 75 SAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL 133
Query: 128 YHLDLSENQLSGSIPP-TLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLS 186
L L+ NQL SIP L+NL L L N L L L + L NQ
Sbjct: 134 KELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Query: 187 GS 188
S
Sbjct: 193 CS 194
Score = 32.7 bits (73), Expect = 0.80, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 52/183 (28%)
Query: 130 LDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSI 189
LDL L+ T L+ L L+L N L + +L L L L++NQL+ S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 190 PISL-GNLSNLVVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXX 248
P+ + +L+ L L+L N L S+PS GV
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQL-KSLPS-------------------GVF----------- 127
Query: 249 XXXXXXXQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGN 308
+L+ L L LN NQL A LT L+ L LSTN+L
Sbjct: 128 ------------------DRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL-Q 168
Query: 309 SIP 311
S+P
Sbjct: 169 SVP 171
Score = 32.3 bits (72), Expect = 1.00, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 269 LSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXXXXXX 328
L+ L +L L+ NQL LTEL L L+ N+L S+P
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 329 QFRKGFPVEL-EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFE 387
K P + ++L +L EL L+ N L+ + +L+ L+LS N + F+
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 388 GMHGLSCIDVSYNEL 402
+ L I + N+
Sbjct: 177 RLGKLQTITLFGNQF 191
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 563 NEIKTLTELR-HRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMN 621
E++ L + + HR++++ F +LV+E + GS ILS+ FN
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASV 115
Query: 622 VIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSDFGIAKFLKPDSSNCT 678
V++ VA+AL ++H+ I HRD+ +N+L + ++ DF + +K + +C+
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN-GDCS 171
Query: 679 EL--------VGTFGYIAPELVYTMK-----VTEKCDVYSFGVLALEVIKGDHP 719
+ G+ Y+APE+V ++CD++S GV+ ++ G P
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 96
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 156 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 97
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 157 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 576 IVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVIRSVANA 629
+++ + P + L+ E E L ++ GA++E F W V + +R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 173
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVGTFGYIA 688
H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ GT Y
Sbjct: 174 -----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSP 224
Query: 689 PELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
PE + Y V+S G+L +++ GD P
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 510 IVRATNGFDVKYCIGIG--GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
I+ ++ +++ IG G G + + K S E++AVK + + E +N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDENVKREIINH--- 69
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
LRH +IV+F P + +V EY G L + N G E + +
Sbjct: 70 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF---FFQQLI 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR--VSDFGIAK----FLKPDSSNCTELV 681
+ +SY H + HRD+ +N LL R + FG +K +P S+ V
Sbjct: 126 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----V 177
Query: 682 GTFGYIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHP 719
GT YIAPE++ + K DV+S GV ++ G +P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI----- 576
+G G G V K + + SG+I+AVK+ + + Q + ++ ++ R++
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDL----DISMRTVDCPFT 112
Query: 577 VKFYGFCSHPRNSFLVYEYLERG---SLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
V FYG + ++ E ++ ++ I E + + S+ AL ++
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE---DILGKIAVSIVKALEHL 169
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV- 692
H ++HRD+ NVL+ + ++ DFGI+ +L DS T G Y+APE +
Sbjct: 170 HSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERIN 226
Query: 693 ---YTMKVTEKCDVYSFGVLALEV 713
+ K D++S G+ +E+
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 96
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 156 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 69
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 128
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 129 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 176
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 78 SLSTLDLSKNKLNGSIPFS--FGNLTNLA-IMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
SL LDLS NG I S F L L + + + N S V +L+ L +LD+S
Sbjct: 79 SLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 135
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGS-IPSIIGNLKSLFYLHLSSNQLSGSIPISL 193
+ LS+L VL + GNS + +P I L++L +L LS QL P +
Sbjct: 136 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 195
Query: 194 GNLSNLVVLHLFENSLFG 211
+LS+L VL++ N+ F
Sbjct: 196 NSLSSLQVLNMSHNNFFS 213
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 330 FRKGF-PVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEG 388
F++ F P +L L+ LDLS LE P ++ SL+ LN+SHNNF L ++
Sbjct: 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221
Query: 389 MHGLSCIDVSYNEL 402
++ L +D S N +
Sbjct: 222 LNSLQVLDYSLNHI 235
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 510 IVRATNGFDVKYCIGIG--GQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKT 567
I+ ++ +++ IG G G + + K S E++AVK + + E +N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDENVKREIINH--- 69
Query: 568 LTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVA 627
LRH +IV+F P + +V EY G L + N G E + +
Sbjct: 70 -RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF---FFQQLI 125
Query: 628 NALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR--VSDFGIAKFLKPDSSNCTELVGTFG 685
+ +SY H + HRD+ +N LL R + FG +K S + VGT
Sbjct: 126 SGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVGTPA 181
Query: 686 YIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHP 719
YIAPE++ + K DV+S GV ++ G +P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 103
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 162
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 163 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 210
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 82 LDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSI 141
L L N++ P F +L NL +YL N L A V +L L LDL NQL+
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLP 104
Query: 142 PPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPI-SLGNLSNLV 200
L +L L + N L+ +P I L L +L L NQL SIP + LS+L
Sbjct: 105 SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLT 162
Query: 201 VLHLFEN 207
+LF N
Sbjct: 163 HAYLFGN 169
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 78 SLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQL 137
S +T+D ++K + S+P G TN I+YL+ N ++ P V +L L L L NQL
Sbjct: 20 SGTTVD-CRSKRHASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76
Query: 138 SGSIP-PTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNL 196
G++P +L+ L VL L N L+ ++ L L L + N+L+ +P + L
Sbjct: 77 -GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERL 134
Query: 197 SNLVVLHLFENSLFGSIP 214
++L L L +N L SIP
Sbjct: 135 THLTHLALDQNQL-KSIP 151
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 70 VGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYH 129
VG+ +L L+ LDL N+L F L +L +++ N L+ +P I L L H
Sbjct: 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTH 139
Query: 130 LDLSENQLSGSIP-PTLGNLSNLAVLHLYGN 159
L L +NQL SIP LS+L +L+GN
Sbjct: 140 LALDQNQLK-SIPHGAFDRLSSLTHAYLFGN 169
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 139 GSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISL-GNLS 197
S+P G +N +L+L+ N ++ P + +L +L L+L SNQL G++P+ + +L+
Sbjct: 32 ASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLT 88
Query: 198 NLVVLHLFENSLFGSIPSIXXXXXXXXXXXXSTNHLSGVIPLSXXXXXXXXXXXXXXXQL 257
L VL L N L ++ N L+
Sbjct: 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT----------------------- 125
Query: 258 SVGEIPIEIGKLSSLNYLVLNGNQL----YGNLPRALGSLT 294
E+P I +L+ L +L L+ NQL +G R L SLT
Sbjct: 126 ---ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR-LSSLT 162
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 27/126 (21%)
Query: 269 LSSLNYLVLNGNQLYGNLPRAL-GSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXXXXX 327
L +L L L NQL G LP + SLT+L LDL TN+L +P
Sbjct: 63 LINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQL-TVLPSAV------------- 107
Query: 328 XQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFE 387
++L+ L EL + N L ++P I + L L L N + F+
Sbjct: 108 ----------FDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156
Query: 388 GMHGLS 393
+ L+
Sbjct: 157 RLSSLT 162
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI----- 576
+G G G V K + + SG+I+AVK+ + + Q + ++ ++ R++
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDL----DISMRTVDCPFT 68
Query: 577 VKFYGFCSHPRNSFLVYEYLERG---SLATILSNDGAIEEFNWTVRMNVIRSVANALSYM 633
V FYG + ++ E ++ ++ I E + + S+ AL ++
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE---DILGKIAVSIVKALEHL 125
Query: 634 HHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV- 692
H ++HRD+ NVL+ + ++ DFGI+ +L D + + G Y+APE +
Sbjct: 126 HSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERIN 182
Query: 693 ---YTMKVTEKCDVYSFGVLALEV 713
+ K D++S G+ +E+
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 49/120 (40%)
Query: 71 GLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHL 130
G+ L +L L L +N+L F LTNL + L N L + V L L L
Sbjct: 103 GVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162
Query: 131 DLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIP 190
DLS NQL L+ L L LY N L + L SL Y+ L N + P
Sbjct: 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 266 IGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXXX 325
I L ++ YL L GN+L+ AL LT L YL L+ N+L S+P
Sbjct: 59 IQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGNQL-QSLPNGV----------- 104
Query: 326 XXXQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSC 385
+KL L EL L N L+ + +L LNL+HN L
Sbjct: 105 ------------FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGV 152
Query: 386 FEGMHGLSCIDVSYNELR 403
F+ + L+ +D+SYN+L+
Sbjct: 153 FDKLTNLTELDLSYNQLQ 170
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 68/167 (40%), Gaps = 3/167 (1%)
Query: 53 GIQCNPAKRVISI---NLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLY 109
GIQ P R +++ L + L +L+ L L+ N+L F LTNL + L
Sbjct: 58 GIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117
Query: 110 RNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSII 169
N L + V L L +L+L+ NQL L+NL L L N L +
Sbjct: 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVF 177
Query: 170 GNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSI 216
L L L L NQL L++L + L +N + P I
Sbjct: 178 DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 224
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 266 IGKLSSLNYLVLNGNQLYGNLPRAL-GSLTELEYLDLSTNKLGNSIPETXXXXXXXXXXX 324
+ +L++L YL+L GNQL LP + LT L+ L L N+L S+P+
Sbjct: 81 LKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYL 138
Query: 325 XXXXQFRKGFPVEL-EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIP 383
+ P + +KL L+ELDLS N L+ + L+ L L N +
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198
Query: 384 SCFEGMHGLSCI 395
F+ + L I
Sbjct: 199 GVFDRLTSLQYI 210
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 91
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 150
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 151 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 198
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 199 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 84
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 143
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 144 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 191
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 84
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 143
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 144 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 191
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 84
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 143
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 144 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 191
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 576 IVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVIRSVANA 629
+++ + P + L+ E E L ++ GA++E F W V + +R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 131
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVGTFGYIA 688
H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ GT Y
Sbjct: 132 -----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSP 182
Query: 689 PELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
PE + Y V+S G+L +++ GD P
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 83
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 142
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 143 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 190
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEI 565
L+EE+ + V+ C+ + G Y A + + + L+ + L E
Sbjct: 15 LFEELGKGAFSV-VRRCVKVLA-GQEYAAMIINTKKLSARDHQKL-----------EREA 61
Query: 566 KTLTELRHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRS 625
+ L+H +IV+ + S + +L+++ + G L + A E ++ + I+
Sbjct: 62 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQ 118
Query: 626 VANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA---RVSDFGIAKFLKPDSSNCTELVG 682
+ A+ + H +VHR++ +N+LL + +++DFG+A ++ + G
Sbjct: 119 ILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 683 TFGYIAPELVYTMKVTEKCDVYSFGVL 709
T GY++PE++ + D+++ GV+
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVI 202
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 42/280 (15%)
Query: 519 VKYCIGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSI 576
V+ + GG VY+A+ + SG A+K+ L E + E+ + +L H +I
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKR---LLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 577 VKFYGFCSHPRNS-------FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANA 629
V+F S + FL+ L +G L L + + + + A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK--PD---SSNCTELV--- 681
+ +MH PPI+HRD+ +N+LL ++ DFG A + PD S+ LV
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 682 ----GTFGYIAPELV---YTMKVTEKCDVYSFGVLALEVIKGDHPRDFXXXXXXXXXXXX 734
T Y PE++ + EK D+++ G + + HP +
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE------------D 255
Query: 735 XXXXEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESR 774
I++ + PP + Q + + A L +N PE R
Sbjct: 256 GAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVN--PEER 293
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 517 FDVKYCIGIGGQGSVYKAKLTSGEI-LAVKKFH----SLWPCEMVPQPEFVNEIKTLTEL 571
+ V +G GG GSVY S + +A+K S W E+ E+ L ++
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-GELPNGTRVPMEVVLLKKV 83
Query: 572 RH--RSIVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVI 623
+++ + P + L+ E E L ++ GA++E F W V + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 142
Query: 624 RSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVG 682
R H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ G
Sbjct: 143 RHC--------HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 190
Query: 683 TFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
T Y PE + Y V+S G+L +++ GD P
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 78 SLSTLDLSKNKLNGSIPFS--FGNLTNLA-IMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134
SL LDLS NG I S F L L + + + N S V +L+ L +LD+S
Sbjct: 374 SLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430
Query: 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGS-IPSIIGNLKSLFYLHLSSNQLSGSIPISL 193
+ LS+L VL + GNS + +P I L++L +L LS QL P +
Sbjct: 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 490
Query: 194 GNLSNLVVLHLFENSLFGSIPS 215
+LS+L VL++ N L S+P
Sbjct: 491 NSLSSLQVLNMASNQL-KSVPD 511
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 576 IVKFYGFCSHPRNSFLVYEYLER-GSLATILSNDGAIEE-----FNWTVRMNVIRSVANA 629
+++ + P + L+ E E L ++ GA++E F W V + +R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 131
Query: 630 LSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKPDSSNCTELVGTFGYIA 688
H+C ++HRDI +N+L+ L+ E ++ DFG LK + T+ GT Y
Sbjct: 132 -----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSP 182
Query: 689 PELV-YTMKVTEKCDVYSFGVLALEVIKGDHP 719
PE + Y V+S G+L +++ GD P
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,329,218
Number of Sequences: 62578
Number of extensions: 841204
Number of successful extensions: 4877
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 322
Number of HSP's that attempted gapping in prelim test: 2131
Number of HSP's gapped (non-prelim): 1596
length of query: 784
length of database: 14,973,337
effective HSP length: 107
effective length of query: 677
effective length of database: 8,277,491
effective search space: 5603861407
effective search space used: 5603861407
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)