Query 042086
Match_columns 784
No_of_seqs 712 out of 5976
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:04:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042086hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.3E-56 1.5E-60 529.2 30.4 337 101-440 294-752 (768)
2 4gt4_A Tyrosine-protein kinase 100.0 6.8E-53 2.3E-57 441.0 19.0 254 515-784 26-301 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 3.2E-53 1.1E-57 441.6 15.4 253 515-784 13-284 (299)
4 4aoj_A High affinity nerve gro 100.0 1.7E-52 5.7E-57 442.3 19.4 252 515-784 41-314 (329)
5 3omv_A RAF proto-oncogene seri 100.0 6.4E-52 2.2E-56 431.5 20.4 256 514-784 35-295 (307)
6 4b9d_A Serine/threonine-protei 100.0 2.1E-52 7.2E-57 441.1 15.7 252 515-782 24-276 (350)
7 4fih_A Serine/threonine-protei 100.0 1.1E-51 3.7E-56 435.0 19.8 249 515-782 74-323 (346)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-51 5.8E-56 426.9 15.9 248 515-780 32-282 (311)
9 3hyh_A Carbon catabolite-derep 100.0 1.4E-50 4.8E-55 414.5 20.6 248 515-782 13-262 (275)
10 4eco_A Uncharacterized protein 100.0 1.3E-49 4.3E-54 462.8 30.5 379 3-397 29-543 (636)
11 4fie_A Serine/threonine-protei 100.0 2E-50 6.9E-55 435.8 21.3 249 515-782 151-400 (423)
12 4g3f_A NF-kappa-beta-inducing 100.0 5.8E-51 2E-55 428.2 15.5 246 515-783 58-310 (336)
13 3fpq_A Serine/threonine-protei 100.0 3.7E-50 1.3E-54 415.2 17.6 249 517-782 28-282 (290)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-50 6.1E-55 419.5 13.5 249 515-782 24-281 (304)
15 3hmm_A TGF-beta receptor type- 100.0 1.1E-49 3.7E-54 418.2 18.7 258 515-784 3-292 (303)
16 4ase_A Vascular endothelial gr 100.0 3.3E-50 1.1E-54 428.1 14.8 261 508-784 57-342 (353)
17 4ecn_A Leucine-rich repeat pro 100.0 3.5E-48 1.2E-52 457.6 31.8 379 3-407 268-799 (876)
18 4g31_A Eukaryotic translation 100.0 5.8E-49 2E-53 410.3 15.4 250 515-782 5-279 (299)
19 4b99_A Mitogen-activated prote 100.0 1.2E-45 4.3E-50 399.9 17.5 260 515-782 54-344 (398)
20 4f9c_A Cell division cycle 7-r 100.0 2.1E-44 7.2E-49 386.3 20.9 198 510-721 16-248 (361)
21 3uto_A Twitchin; kinase, muscl 100.0 1.4E-44 4.9E-49 411.1 18.7 251 515-782 157-410 (573)
22 3v5w_A G-protein coupled recep 100.0 6.4E-45 2.2E-49 409.8 15.0 251 515-782 189-449 (689)
23 3rgz_A Protein brassinosteroid 100.0 1E-43 3.6E-48 422.6 24.4 281 76-359 246-555 (768)
24 3uim_A Brassinosteroid insensi 100.0 6.1E-43 2.1E-47 373.6 21.9 278 503-784 18-306 (326)
25 3v47_A TOLL-like receptor 5B a 100.0 1.5E-42 5.2E-47 388.5 25.2 333 76-409 29-414 (455)
26 3fxz_A Serine/threonine-protei 100.0 1.8E-42 6.2E-47 364.3 21.0 250 514-782 19-269 (297)
27 2qkw_B Protein kinase; three-h 100.0 1.6E-42 5.4E-47 369.5 19.3 268 509-784 33-310 (321)
28 3p86_A Serine/threonine-protei 100.0 1.1E-42 3.8E-47 367.9 16.6 258 512-784 34-293 (309)
29 2c30_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 362.5 23.5 261 503-782 23-294 (321)
30 1o6l_A RAC-beta serine/threoni 100.0 5.3E-42 1.8E-46 366.2 21.1 250 515-782 5-260 (337)
31 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-41 3.6E-46 396.0 25.3 368 60-430 32-562 (606)
32 3zgw_A Maternal embryonic leuc 100.0 6.6E-42 2.2E-46 366.5 20.2 249 514-782 9-260 (347)
33 1ogq_A PGIP-2, polygalacturona 100.0 3E-42 1E-46 365.1 17.4 293 2-353 4-302 (313)
34 3fe3_A MAP/microtubule affinit 100.0 5.7E-42 1.9E-46 365.0 19.6 249 514-782 14-264 (328)
35 2yab_A Death-associated protei 100.0 9.1E-42 3.1E-46 367.7 21.3 254 514-782 11-272 (361)
36 3j0a_A TOLL-like receptor 5; m 100.0 3.9E-41 1.3E-45 404.6 28.9 374 49-428 14-562 (844)
37 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-41 4.6E-46 360.4 22.0 253 515-784 10-277 (310)
38 4dc2_A Protein kinase C IOTA t 100.0 9.3E-42 3.2E-46 370.8 20.3 259 514-782 51-318 (396)
39 1tki_A Titin; serine kinase, m 100.0 3.8E-42 1.3E-46 365.7 16.8 251 514-782 4-257 (321)
40 2psq_A Fibroblast growth facto 100.0 1.3E-41 4.3E-46 369.1 20.6 255 514-784 80-359 (370)
41 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-41 6.7E-46 361.4 20.5 248 515-782 9-258 (336)
42 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.6E-42 1.6E-46 369.1 15.4 252 513-782 21-280 (353)
43 2nru_A Interleukin-1 receptor- 100.0 9.5E-41 3.2E-45 353.4 25.2 274 503-784 13-301 (307)
44 4hcu_A Tyrosine-protein kinase 100.0 1.3E-41 4.5E-46 352.7 18.1 251 514-784 9-261 (269)
45 3soa_A Calcium/calmodulin-depe 100.0 1.5E-41 5E-46 375.7 19.5 255 513-782 9-267 (444)
46 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.3E-41 7.7E-46 350.7 19.3 251 514-784 7-259 (268)
47 4eqm_A Protein kinase; transfe 100.0 6.1E-42 2.1E-46 359.9 15.3 256 514-783 10-269 (294)
48 3niz_A Rhodanese family protei 100.0 3.3E-41 1.1E-45 357.3 20.4 262 514-782 20-300 (311)
49 2y0a_A Death-associated protei 100.0 2.4E-41 8.1E-46 360.7 19.2 254 514-782 10-271 (326)
50 3kul_A Ephrin type-A receptor 100.0 2.1E-41 7.2E-46 360.9 18.5 252 514-784 48-308 (325)
51 3c0i_A Peripheral plasma membr 100.0 6.6E-42 2.3E-46 368.8 14.8 257 514-782 23-286 (351)
52 2id5_A Lingo-1, leucine rich r 100.0 9.5E-41 3.3E-45 376.1 24.8 331 76-431 31-361 (477)
53 3a8x_A Protein kinase C IOTA t 100.0 2.7E-41 9.1E-46 362.4 19.2 258 515-782 9-275 (345)
54 4euu_A Serine/threonine-protei 100.0 9.5E-41 3.3E-45 355.3 23.2 263 515-783 9-303 (319)
55 1xjd_A Protein kinase C, theta 100.0 1.3E-41 4.3E-46 364.2 15.8 253 512-782 14-269 (345)
56 1fot_A TPK1 delta, CAMP-depend 100.0 5.7E-41 1.9E-45 355.6 20.3 247 515-782 6-258 (318)
57 2bdw_A Hypothetical protein K1 100.0 3.1E-41 1E-45 364.7 18.4 254 513-782 27-284 (362)
58 3cok_A Serine/threonine-protei 100.0 8.2E-41 2.8E-45 348.5 20.5 252 514-782 10-262 (278)
59 3t6q_A CD180 antigen; protein- 100.0 6.9E-40 2.4E-44 380.7 30.2 326 78-405 34-415 (606)
60 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-41 5.3E-46 369.7 15.0 252 514-784 113-369 (377)
61 3qd2_B Eukaryotic translation 100.0 4.3E-41 1.5E-45 360.1 18.2 252 514-783 5-326 (332)
62 2i0e_A Protein kinase C-beta I 100.0 4.7E-41 1.6E-45 361.0 18.3 252 513-782 18-276 (353)
63 2qol_A Ephrin receptor; recept 100.0 2.7E-41 9.3E-46 366.7 16.5 252 514-784 44-304 (373)
64 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.9E-41 2.7E-45 359.3 19.5 247 515-782 41-293 (350)
65 1ob3_A PFPK5, cell division co 100.0 2.5E-40 8.4E-45 346.7 22.8 261 515-782 2-280 (288)
66 3gen_A Tyrosine-protein kinase 100.0 5E-41 1.7E-45 351.1 17.4 251 514-784 23-275 (283)
67 2zv2_A Calcium/calmodulin-depe 100.0 5.6E-41 1.9E-45 353.5 17.4 252 514-782 12-292 (298)
68 4eco_A Uncharacterized protein 100.0 1.5E-40 5.1E-45 386.4 22.8 338 77-423 81-546 (636)
69 1kob_A Twitchin; kinase, intra 100.0 8.5E-41 2.9E-45 363.4 19.3 252 514-782 50-304 (387)
70 4fr4_A YANK1, serine/threonine 100.0 4.3E-41 1.5E-45 364.4 16.7 252 515-782 15-271 (384)
71 3v8s_A RHO-associated protein 100.0 9.3E-42 3.2E-46 372.9 11.6 254 510-782 64-329 (410)
72 3q4u_A Activin receptor type-1 100.0 7E-41 2.4E-45 353.3 17.9 253 514-784 7-297 (301)
73 3soc_A Activin receptor type-2 100.0 3.7E-41 1.3E-45 358.8 15.9 262 514-784 23-313 (322)
74 3a62_A Ribosomal protein S6 ki 100.0 1.4E-40 4.7E-45 355.0 19.9 251 514-782 16-276 (327)
75 3o0g_A Cell division protein k 100.0 4.2E-40 1.5E-44 345.7 23.0 261 515-782 2-282 (292)
76 2r5t_A Serine/threonine-protei 100.0 6.3E-41 2.1E-45 362.6 16.7 247 514-778 37-285 (373)
77 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-40 4.1E-45 358.5 18.6 250 514-782 52-305 (349)
78 4aw2_A Serine/threonine-protei 100.0 2.6E-41 8.7E-46 372.3 13.5 259 508-782 67-338 (437)
79 4ejn_A RAC-alpha serine/threon 100.0 6E-41 2.1E-45 373.6 16.5 251 514-782 147-404 (446)
80 1luf_A Muscle-specific tyrosin 100.0 7.4E-41 2.5E-45 360.2 16.6 256 513-784 45-330 (343)
81 2eue_A Carbon catabolite derep 100.0 2E-40 6.9E-45 345.0 19.3 248 515-782 13-262 (275)
82 3t6q_A CD180 antigen; protein- 100.0 2E-39 6.8E-44 376.9 29.8 363 60-424 33-460 (606)
83 2y94_A 5'-AMP-activated protei 100.0 2.1E-40 7.4E-45 368.6 20.5 249 515-782 16-266 (476)
84 3tki_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 354.6 17.3 252 514-782 6-261 (323)
85 2a2a_A Death-associated protei 100.0 2.6E-40 9E-45 352.2 20.0 254 514-782 11-272 (321)
86 3lb7_A RAF proto-oncogene seri 100.0 2.2E-40 7.4E-45 350.1 19.0 256 514-784 35-295 (307)
87 3tt0_A Basic fibroblast growth 100.0 2.1E-40 7.2E-45 361.6 19.5 255 514-784 68-347 (382)
88 3ork_A Serine/threonine protei 100.0 1.5E-41 5.1E-46 360.1 10.0 255 514-782 11-273 (311)
89 3poz_A Epidermal growth factor 100.0 1.9E-40 6.7E-45 354.0 18.5 250 514-784 14-273 (327)
90 2z63_A TOLL-like receptor 4, v 100.0 5.1E-40 1.8E-44 379.0 23.4 366 61-428 29-533 (570)
91 3kn6_A Ribosomal protein S6 ki 100.0 8.3E-41 2.8E-45 356.2 15.5 250 520-782 16-270 (325)
92 1qcf_A Haematopoetic cell kina 100.0 7E-41 2.4E-45 373.6 15.5 251 513-784 186-439 (454)
93 2z81_A CD282 antigen, TOLL-lik 100.0 2.8E-40 9.4E-45 379.4 20.9 181 48-235 3-210 (549)
94 1k9a_A Carboxyl-terminal SRC k 100.0 4.5E-40 1.5E-44 366.4 21.8 246 514-784 192-440 (450)
95 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-39 4.6E-44 378.3 26.7 330 76-407 31-514 (606)
96 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-39 7.3E-44 344.4 25.9 263 514-782 4-293 (317)
97 3l9p_A Anaplastic lymphoma kin 100.0 7.2E-41 2.5E-45 362.9 14.8 255 514-784 70-340 (367)
98 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-40 6.5E-45 373.5 18.8 251 514-784 219-473 (495)
99 2rku_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 346.7 19.6 251 514-782 14-265 (294)
100 2ivs_A Proto-oncogene tyrosine 100.0 2.9E-40 9.9E-45 350.9 19.1 255 514-784 22-306 (314)
101 3t9t_A Tyrosine-protein kinase 100.0 2.1E-40 7.1E-45 343.2 17.4 251 514-784 7-259 (267)
102 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-40 4E-45 357.0 15.9 252 513-782 20-277 (342)
103 3ugc_A Tyrosine-protein kinase 100.0 8.1E-41 2.8E-45 351.7 14.3 259 514-784 9-286 (295)
104 3dtc_A Mitogen-activated prote 100.0 2.5E-40 8.4E-45 343.5 17.6 253 514-784 6-268 (271)
105 2x4f_A Myosin light chain kina 100.0 1.1E-40 3.9E-45 361.6 15.7 246 520-782 94-342 (373)
106 3vhe_A Vascular endothelial gr 100.0 6.6E-41 2.3E-45 362.9 13.5 263 507-784 14-350 (359)
107 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-40 5.1E-45 373.9 16.6 258 514-782 184-448 (543)
108 3dls_A PAS domain-containing s 100.0 7.9E-40 2.7E-44 350.0 21.5 246 513-783 22-275 (335)
109 3hko_A Calcium/calmodulin-depe 100.0 1.5E-40 5.2E-45 358.0 16.0 262 510-782 21-330 (345)
110 3kk8_A Calcium/calmodulin depe 100.0 3.9E-40 1.3E-44 344.5 18.6 253 514-782 5-261 (284)
111 1mp8_A Focal adhesion kinase 1 100.0 3E-40 1E-44 344.7 17.4 252 514-784 14-271 (281)
112 2vd5_A DMPK protein; serine/th 100.0 4.9E-41 1.7E-45 367.5 11.8 258 508-782 54-327 (412)
113 3uc3_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 355.3 19.5 252 514-782 19-274 (361)
114 2izr_A Casein kinase I isoform 100.0 8E-41 2.7E-45 357.7 13.1 254 514-784 8-276 (330)
115 3fdn_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 344.1 17.5 249 514-782 8-257 (279)
116 3f3z_A Calcium/calmodulin-depe 100.0 3.6E-40 1.2E-44 343.5 17.6 250 514-782 8-261 (277)
117 2acx_A G protein-coupled recep 100.0 1.5E-40 5.1E-45 374.5 15.6 256 514-782 183-444 (576)
118 2owb_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 352.6 18.5 251 514-782 40-291 (335)
119 3oja_B Anopheles plasmodium-re 100.0 4.2E-40 1.4E-44 380.5 19.6 337 75-431 49-385 (597)
120 1nxk_A MAP kinase-activated pr 100.0 7.2E-40 2.4E-44 358.8 20.2 251 515-782 61-321 (400)
121 1rjb_A FL cytokine receptor; k 100.0 5.3E-40 1.8E-44 353.6 18.8 256 513-784 43-329 (344)
122 2eva_A TAK1 kinase - TAB1 chim 100.0 5E-40 1.7E-44 347.6 18.1 250 515-784 8-258 (307)
123 3kfa_A Tyrosine-protein kinase 100.0 1.5E-40 5.1E-45 348.5 13.9 253 513-784 11-266 (288)
124 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.6E-40 8.8E-45 368.6 16.6 250 514-784 183-435 (452)
125 4f0f_A Serine/threonine-protei 100.0 5.4E-40 1.9E-44 344.0 18.1 252 514-784 18-284 (287)
126 3qup_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 351.6 17.0 257 513-784 21-293 (323)
127 3gni_B Strad alpha; kinase fol 100.0 7.1E-40 2.4E-44 358.7 19.7 264 514-782 24-333 (389)
128 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-40 1.4E-44 348.9 16.6 246 515-782 57-304 (311)
129 1u5q_A Serine/threonine protei 100.0 3.6E-40 1.2E-44 354.3 16.0 247 515-782 54-305 (348)
130 3bhy_A Death-associated protei 100.0 7.4E-40 2.5E-44 342.2 17.9 253 515-782 5-265 (283)
131 3kex_A Receptor tyrosine-prote 100.0 4.9E-40 1.7E-44 350.7 16.7 250 515-784 13-271 (325)
132 1csn_A Casein kinase-1; phosph 100.0 9.5E-40 3.3E-44 344.1 18.6 255 514-784 9-278 (298)
133 3o6n_A APL1; leucine-rich repe 100.0 1.1E-39 3.8E-44 357.3 19.7 336 75-430 43-378 (390)
134 2z63_A TOLL-like receptor 4, v 100.0 5.8E-39 2E-43 370.2 26.4 345 77-424 28-505 (570)
135 2i1m_A Macrophage colony-stimu 100.0 1.3E-40 4.4E-45 356.7 11.6 257 512-784 43-321 (333)
136 1t46_A HOMO sapiens V-KIT hard 100.0 6.2E-40 2.1E-44 348.1 16.7 255 514-784 22-302 (313)
137 2pvf_A Fibroblast growth facto 100.0 9.2E-40 3.1E-44 350.1 18.1 255 514-784 34-313 (334)
138 2vgo_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 340.7 18.6 249 514-782 13-262 (284)
139 1qpc_A LCK kinase; alpha beta 100.0 9.8E-40 3.3E-44 340.6 17.8 252 513-784 11-264 (279)
140 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-39 9.5E-44 341.4 21.4 249 514-782 21-270 (303)
141 3g33_A Cell division protein k 100.0 1.2E-39 4E-44 345.1 18.6 265 513-783 7-297 (308)
142 3nyv_A Calmodulin-domain prote 100.0 7.2E-40 2.5E-44 369.2 17.9 253 514-782 25-281 (484)
143 4eut_A Serine/threonine-protei 100.0 8.9E-40 3.1E-44 358.3 18.1 263 515-783 9-303 (396)
144 3v47_A TOLL-like receptor 5B a 100.0 5E-39 1.7E-43 360.0 24.5 330 101-430 30-412 (455)
145 4agu_A Cyclin-dependent kinase 100.0 7.3E-40 2.5E-44 347.3 16.7 261 515-782 3-284 (311)
146 3c1x_A Hepatocyte growth facto 100.0 6.5E-40 2.2E-44 355.4 16.7 251 516-784 90-350 (373)
147 3kmu_A ILK, integrin-linked ki 100.0 8.5E-40 2.9E-44 339.3 16.9 249 514-784 9-265 (271)
148 3mtl_A Cell division protein k 100.0 3.8E-40 1.3E-44 351.3 14.6 260 515-782 2-281 (324)
149 2wqm_A Serine/threonine-protei 100.0 6.1E-40 2.1E-44 347.7 16.0 260 514-784 31-292 (310)
150 2w5a_A Serine/threonine-protei 100.0 2.2E-40 7.5E-45 345.5 12.3 255 514-783 5-268 (279)
151 4e5w_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 344.0 17.9 259 515-784 21-297 (302)
152 3dbq_A Dual specificity protei 100.0 9E-40 3.1E-44 351.3 17.1 250 514-782 8-273 (343)
153 1p4o_A Insulin-like growth fac 100.0 1.5E-40 5.1E-45 354.4 11.0 260 509-784 19-294 (322)
154 3lzb_A Epidermal growth factor 100.0 1.7E-39 5.8E-44 346.5 19.1 251 514-784 14-273 (327)
155 1ua2_A CAK, cell division prot 100.0 1.1E-39 3.7E-44 351.2 17.7 266 512-783 7-292 (346)
156 2h34_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44 348.3 14.3 257 513-784 32-291 (309)
157 3i6u_A CDS1, serine/threonine- 100.0 7.7E-40 2.6E-44 361.0 16.4 256 512-782 132-399 (419)
158 2zmd_A Dual specificity protei 100.0 1.3E-39 4.4E-44 355.7 18.0 249 515-782 56-320 (390)
159 3is5_A Calcium-dependent prote 100.0 1.1E-39 3.9E-44 341.1 16.5 253 514-782 21-278 (285)
160 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.1E-39 2.8E-43 367.7 25.1 354 63-429 34-513 (562)
161 2jam_A Calcium/calmodulin-depe 100.0 2.1E-39 7.2E-44 342.5 18.4 250 514-782 8-261 (304)
162 3byv_A Rhoptry kinase; malaria 100.0 3E-40 1E-44 359.8 12.2 245 514-782 72-359 (377)
163 1u59_A Tyrosine-protein kinase 100.0 2.8E-39 9.6E-44 338.6 18.9 251 515-784 9-267 (287)
164 4fvq_A Tyrosine-protein kinase 100.0 9.6E-40 3.3E-44 342.5 15.4 246 514-784 7-270 (289)
165 3llt_A Serine/threonine kinase 100.0 1.6E-39 5.4E-44 352.2 17.5 198 513-722 33-261 (360)
166 2clq_A Mitogen-activated prote 100.0 3.2E-39 1.1E-43 339.6 19.3 252 516-782 23-278 (295)
167 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-39 7.5E-44 376.8 19.8 252 513-782 339-597 (674)
168 3gxj_A TGF-beta receptor type- 100.0 7.4E-41 2.5E-45 353.4 6.7 253 515-784 3-292 (303)
169 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.2E-39 1.4E-43 344.0 20.3 262 513-782 32-318 (329)
170 3mdy_A Bone morphogenetic prot 100.0 5.4E-39 1.8E-43 344.7 21.1 259 511-784 33-326 (337)
171 2h6d_A 5'-AMP-activated protei 100.0 2.4E-39 8.1E-44 337.1 17.7 249 515-782 11-261 (276)
172 1mqb_A Ephrin type-A receptor 100.0 2.9E-39 9.8E-44 345.8 18.7 251 515-784 44-304 (333)
173 2y7j_A Phosphorylase B kinase 100.0 2.2E-39 7.4E-44 351.0 18.0 261 507-782 86-359 (365)
174 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-39 4.6E-44 341.3 15.7 256 514-784 23-283 (289)
175 2ozo_A Tyrosine-protein kinase 100.0 4.5E-39 1.5E-43 370.8 21.1 249 516-784 336-593 (613)
176 4ecn_A Leucine-rich repeat pro 100.0 9E-39 3.1E-43 377.4 24.1 339 77-424 323-787 (876)
177 3f66_A Hepatocyte growth facto 100.0 3.8E-39 1.3E-43 339.5 18.8 253 514-784 24-286 (298)
178 3lm5_A Serine/threonine-protei 100.0 2.1E-39 7.3E-44 346.0 16.8 259 510-782 23-287 (327)
179 3cc6_A Protein tyrosine kinase 100.0 2.8E-39 9.7E-44 337.4 17.3 251 514-784 11-268 (281)
180 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-38 4E-43 363.2 23.9 355 60-428 21-483 (520)
181 2ac3_A MAP kinase-interacting 100.0 1.9E-39 6.4E-44 344.9 16.2 259 515-782 12-295 (316)
182 3lij_A Calcium/calmodulin depe 100.0 3.5E-39 1.2E-43 364.1 19.1 252 514-782 36-291 (494)
183 4g8a_A TOLL-like receptor 4; l 100.0 5.8E-38 2E-42 366.6 30.0 352 77-428 52-582 (635)
184 1xbb_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 340.9 15.4 252 514-784 15-274 (291)
185 3q5i_A Protein kinase; CDPK, m 100.0 3.5E-39 1.2E-43 365.0 19.0 253 514-782 35-301 (504)
186 3mwu_A Calmodulin-domain prote 100.0 3E-39 1E-43 364.0 18.2 252 514-782 21-276 (486)
187 3brb_A Proto-oncogene tyrosine 100.0 3.5E-39 1.2E-43 342.3 17.7 257 513-784 32-303 (313)
188 3com_A Serine/threonine-protei 100.0 5.7E-39 1.9E-43 340.9 19.2 251 513-782 27-278 (314)
189 1fvr_A Tyrosine-protein kinase 100.0 4.9E-39 1.7E-43 343.4 18.7 253 515-784 25-295 (327)
190 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-39 3.7E-44 370.8 14.1 251 513-784 265-518 (535)
191 1x8b_A WEE1HU, WEE1-like prote 100.0 5E-39 1.7E-43 336.8 18.0 248 514-783 10-280 (289)
192 2xir_A Vascular endothelial gr 100.0 2.2E-39 7.6E-44 344.3 15.5 262 508-784 20-305 (316)
193 4hgt_A Casein kinase I isoform 100.0 5.6E-39 1.9E-43 337.9 18.3 256 513-784 7-275 (296)
194 3ttj_A Mitogen-activated prote 100.0 5.9E-39 2E-43 357.8 19.4 258 514-782 61-355 (464)
195 3lxl_A Tyrosine-protein kinase 100.0 2.4E-39 8.3E-44 345.8 15.5 260 514-784 22-298 (327)
196 3pls_A Macrophage-stimulating 100.0 1.1E-38 3.8E-43 335.9 20.3 251 516-784 22-282 (298)
197 1vzo_A Ribosomal protein S6 ki 100.0 8.2E-40 2.8E-44 353.0 11.9 255 515-783 54-322 (355)
198 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-38 4.2E-43 345.7 21.1 244 514-782 64-332 (365)
199 3lxp_A Non-receptor tyrosine-p 100.0 4.7E-39 1.6E-43 342.0 17.1 256 517-784 33-305 (318)
200 3uzp_A CKI-delta, CKID, casein 100.0 9E-39 3.1E-43 336.3 19.0 255 514-784 8-275 (296)
201 1byg_A CSK, protein (C-termina 100.0 3.8E-39 1.3E-43 335.9 15.9 247 514-784 20-268 (278)
202 3mi9_A Cell division protein k 100.0 8.1E-39 2.8E-43 345.3 18.9 261 515-782 17-311 (351)
203 2x7f_A TRAF2 and NCK-interacti 100.0 8E-39 2.7E-43 341.7 18.6 251 513-782 22-286 (326)
204 2yex_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 333.2 17.9 252 514-782 6-261 (276)
205 2ycf_A Serine/threonine-protei 100.0 4E-39 1.4E-43 343.3 16.1 255 513-782 8-274 (322)
206 1b6c_B TGF-B superfamily recep 100.0 1.4E-38 4.9E-43 342.1 20.4 258 510-784 37-331 (342)
207 2yfx_A Tyrosine-protein kinase 100.0 3.7E-39 1.3E-43 344.4 15.6 255 514-784 29-299 (327)
208 2j7t_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 341.3 14.4 252 514-782 18-275 (302)
209 3g2f_A Bone morphogenetic prot 100.0 4.3E-39 1.5E-43 345.3 16.1 260 514-784 12-313 (336)
210 3q60_A ROP5B; pseudokinase, tr 100.0 4.5E-39 1.6E-43 349.8 16.4 256 515-782 62-352 (371)
211 3op5_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 352.8 12.4 260 514-784 34-324 (364)
212 2r3i_A Cell division protein k 100.0 7.3E-38 2.5E-42 329.9 25.1 262 515-782 3-283 (299)
213 1phk_A Phosphorylase kinase; g 100.0 1.3E-38 4.6E-43 335.3 19.4 255 513-782 15-283 (298)
214 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-37 3.7E-42 367.2 29.3 350 79-429 250-625 (680)
215 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-38 4.1E-43 365.8 20.5 163 49-211 12-210 (549)
216 3oz6_A Mitogen-activated prote 100.0 2.4E-39 8.3E-44 354.2 13.9 202 512-722 6-233 (388)
217 4aaa_A Cyclin-dependent kinase 100.0 4.8E-39 1.6E-43 344.0 15.5 262 514-782 24-306 (331)
218 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-37 7.9E-42 364.4 31.2 343 60-403 25-467 (680)
219 2a19_B Interferon-induced, dou 100.0 6.3E-39 2.2E-43 335.3 15.7 244 513-784 9-269 (284)
220 2v62_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 349.1 11.8 260 514-784 36-323 (345)
221 3n9x_A Phosphotransferase; mal 100.0 2.6E-38 8.9E-43 350.4 21.0 200 514-721 25-253 (432)
222 4fl3_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 368.4 18.7 245 521-784 375-626 (635)
223 1u46_A ACK-1, activated CDC42 100.0 3.3E-39 1.1E-43 338.7 12.9 253 514-784 17-279 (291)
224 2pml_X PFPK7, Ser/Thr protein 100.0 5.9E-39 2E-43 346.0 14.9 255 514-782 30-322 (348)
225 1t4h_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 332.2 18.9 249 515-782 26-282 (290)
226 2vwi_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 339.6 13.7 263 513-782 13-287 (303)
227 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-38 4.3E-43 340.0 16.9 259 514-784 40-317 (326)
228 3rp9_A Mitogen-activated prote 100.0 1.4E-38 4.8E-43 356.0 17.9 195 514-716 52-280 (458)
229 2z7x_B TOLL-like receptor 1, v 100.0 4.7E-38 1.6E-42 358.2 22.5 335 60-408 45-486 (520)
230 2wtk_C Serine/threonine-protei 100.0 4E-38 1.4E-42 332.9 20.0 252 514-782 4-263 (305)
231 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-37 5.5E-42 356.9 26.7 336 79-426 33-486 (562)
232 3pg1_A Mitogen-activated prote 100.0 1.1E-38 3.8E-43 345.8 15.5 270 506-782 13-316 (362)
233 3j0a_A TOLL-like receptor 5; m 100.0 2.7E-37 9.3E-42 371.2 29.1 305 75-380 22-376 (844)
234 3eqc_A Dual specificity mitoge 100.0 9.9E-39 3.4E-43 345.9 15.0 258 514-782 32-324 (360)
235 2wei_A Calmodulin-domain prote 100.0 2.3E-38 7.9E-43 331.6 17.3 255 511-782 18-276 (287)
236 2jii_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 348.1 11.3 253 514-784 41-331 (352)
237 1cm8_A Phosphorylated MAP kina 100.0 1.8E-38 6.2E-43 343.8 16.5 254 514-782 24-307 (367)
238 3ll6_A Cyclin G-associated kin 100.0 1.5E-38 5.1E-43 341.2 15.7 249 514-784 27-303 (337)
239 2buj_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 337.8 15.8 256 514-784 28-301 (317)
240 1zy4_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 335.5 15.5 251 514-783 5-284 (303)
241 3kvw_A DYRK2, dual specificity 100.0 8.9E-38 3E-42 345.4 21.9 197 514-722 96-301 (429)
242 3nsz_A CK II alpha, casein kin 100.0 9.7E-38 3.3E-42 333.9 21.1 252 515-782 36-319 (330)
243 2xrw_A Mitogen-activated prote 100.0 4E-38 1.4E-42 342.1 18.1 258 514-782 24-318 (371)
244 1blx_A Cyclin-dependent kinase 100.0 1.2E-37 4.2E-42 332.4 20.3 263 513-782 9-296 (326)
245 3e3p_A Protein kinase, putativ 100.0 3.4E-38 1.2E-42 341.8 15.8 266 508-782 16-314 (360)
246 3fme_A Dual specificity mitoge 100.0 3.1E-38 1.1E-42 331.1 15.0 254 514-782 6-266 (290)
247 4e7w_A Glycogen synthase kinas 100.0 9E-38 3.1E-42 341.7 19.1 257 515-782 40-321 (394)
248 3sv0_A Casein kinase I-like; t 100.0 6.7E-38 2.3E-42 349.2 18.3 255 514-784 6-273 (483)
249 3fhr_A MAP kinase-activated pr 100.0 8.8E-38 3E-42 334.6 18.2 251 514-782 27-287 (336)
250 3qyz_A Mitogen-activated prote 100.0 4.8E-38 1.6E-42 340.8 16.3 259 514-782 26-313 (364)
251 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.4E-38 1.5E-42 334.8 15.7 253 513-784 31-297 (319)
252 3eb0_A Putative uncharacterize 100.0 1.2E-37 3.9E-42 340.1 19.3 260 511-782 3-321 (383)
253 1wak_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 343.7 17.5 258 514-782 36-391 (397)
254 1z57_A Dual specificity protei 100.0 1.4E-37 4.7E-42 333.9 18.5 257 514-782 13-328 (339)
255 3cek_A Dual specificity protei 100.0 1.3E-37 4.6E-42 330.1 17.2 250 514-782 27-292 (313)
256 1j1b_A Glycogen synthase kinas 100.0 1.3E-37 4.5E-42 343.2 17.8 256 515-782 54-336 (420)
257 3an0_A Dual specificity mitoge 100.0 1.1E-37 3.7E-42 334.9 16.6 254 514-782 50-310 (340)
258 3rgf_A Cyclin-dependent kinase 100.0 3E-38 1E-42 347.4 12.4 200 514-722 19-238 (405)
259 2fst_X Mitogen-activated prote 100.0 6.7E-38 2.3E-42 339.0 14.9 257 514-782 28-311 (367)
260 2j0j_A Focal adhesion kinase 1 100.0 1.1E-37 3.6E-42 361.5 17.2 252 513-784 388-646 (656)
261 2vx3_A Dual specificity tyrosi 100.0 4.2E-37 1.4E-41 335.6 20.0 199 514-722 53-260 (382)
262 3a99_A Proto-oncogene serine/t 100.0 1.2E-37 3.9E-42 331.5 15.1 245 512-782 40-293 (320)
263 4exu_A Mitogen-activated prote 100.0 1.2E-37 4.1E-42 338.4 15.3 256 514-782 41-323 (371)
264 2rio_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41 341.8 19.0 251 515-782 15-295 (434)
265 2i6l_A Mitogen-activated prote 100.0 8.3E-38 2.8E-42 332.8 13.5 258 514-782 10-305 (320)
266 2iwi_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 327.5 17.6 248 510-783 26-284 (312)
267 3aln_A Dual specificity mitoge 100.0 2.4E-37 8.1E-42 330.4 16.9 256 514-782 21-285 (327)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 2.9E-37 1E-41 333.4 17.6 258 514-782 10-305 (353)
269 3qa8_A MGC80376 protein; kinas 100.0 1.1E-37 3.8E-42 354.2 14.9 262 514-781 13-296 (676)
270 3p23_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 339.1 18.5 248 514-782 23-283 (432)
271 3coi_A Mitogen-activated prote 100.0 2.8E-37 9.6E-42 333.5 15.6 255 515-782 24-305 (353)
272 2eu9_A Dual specificity protei 100.0 8.9E-37 3E-41 329.9 18.8 257 514-782 18-333 (355)
273 2id5_A Lingo-1, leucine rich r 100.0 4E-36 1.4E-40 338.4 24.6 321 80-429 14-336 (477)
274 1q8y_A SR protein kinase; tran 100.0 3.9E-37 1.3E-41 335.1 15.8 258 514-782 18-333 (373)
275 1o6v_A Internalin A; bacterial 100.0 2.7E-35 9.1E-40 330.2 28.1 336 61-425 47-387 (466)
276 2dyl_A Dual specificity mitoge 100.0 5.5E-37 1.9E-41 326.2 13.4 253 514-782 24-283 (318)
277 4fmz_A Internalin; leucine ric 100.0 3.6E-35 1.2E-39 316.3 27.0 306 74-403 41-346 (347)
278 3uqc_A Probable conserved tran 100.0 3.2E-36 1.1E-40 314.4 16.2 229 515-784 31-260 (286)
279 3m2w_A MAP kinase-activated pr 100.0 2.1E-35 7.2E-40 310.9 19.5 230 515-782 17-256 (299)
280 3dzo_A Rhoptry kinase domain; 100.0 1.6E-35 5.6E-40 325.8 17.9 244 515-782 78-363 (413)
281 3o6n_A APL1; leucine-rich repe 100.0 6.3E-35 2.2E-39 319.6 21.7 313 99-429 43-355 (390)
282 2pzi_A Probable serine/threoni 100.0 1.1E-35 3.9E-40 348.1 16.3 233 515-781 80-319 (681)
283 1o6v_A Internalin A; bacterial 100.0 3.2E-34 1.1E-38 321.4 26.8 317 60-404 68-389 (466)
284 4g8a_A TOLL-like receptor 4; l 100.0 4.9E-34 1.7E-38 333.4 29.0 332 93-426 46-555 (635)
285 3bz5_A Internalin-J, INLJ; leu 100.0 3.9E-34 1.3E-38 318.3 26.5 302 74-407 39-355 (457)
286 4fcg_A Uncharacterized protein 100.0 1.5E-35 5.1E-40 315.6 13.5 281 3-332 26-315 (328)
287 3oja_B Anopheles plasmodium-re 100.0 1.1E-34 3.9E-39 335.0 21.9 313 99-429 49-361 (597)
288 3bz5_A Internalin-J, INLJ; leu 100.0 6.3E-34 2.1E-38 316.6 26.7 318 61-409 43-393 (457)
289 2ft3_A Biglycan; proteoglycan, 100.0 5.4E-34 1.8E-38 304.9 24.6 287 103-401 35-331 (332)
290 1xku_A Decorin; proteoglycan, 100.0 1.1E-33 3.9E-38 302.1 25.2 291 78-401 32-330 (330)
291 1ogq_A PGIP-2, polygalacturona 100.0 8.7E-35 3E-39 307.8 14.8 255 149-430 50-308 (313)
292 4fmz_A Internalin; leucine ric 100.0 3.5E-33 1.2E-37 300.7 26.3 297 61-379 45-346 (347)
293 1xku_A Decorin; proteoglycan, 100.0 8.7E-33 3E-37 295.3 26.5 296 49-377 31-330 (330)
294 2vuw_A Serine/threonine-protei 100.0 2.3E-35 7.8E-40 316.2 6.4 245 514-781 19-329 (336)
295 2ft3_A Biglycan; proteoglycan, 100.0 5.5E-33 1.9E-37 297.0 24.6 267 102-377 55-331 (332)
296 1jl5_A Outer protein YOPM; leu 100.0 5.6E-32 1.9E-36 300.6 29.1 304 62-404 73-410 (454)
297 1jl5_A Outer protein YOPM; leu 100.0 9.1E-32 3.1E-36 298.9 22.1 309 74-424 31-368 (454)
298 2z66_A Variable lymphocyte rec 100.0 3.9E-31 1.3E-35 279.3 19.1 261 102-364 29-296 (306)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-34 4.3E-39 324.8 -9.5 344 61-404 4-412 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 3E-31 1E-35 286.2 16.6 280 101-408 31-319 (353)
301 2z80_A TOLL-like receptor 2, v 100.0 3E-31 1E-35 286.1 16.1 258 102-383 53-318 (353)
302 2z66_A Variable lymphocyte rec 100.0 1.3E-30 4.3E-35 275.4 16.1 276 105-408 11-292 (306)
303 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-33 5.2E-38 316.0 -10.4 329 76-404 2-384 (461)
304 3zyi_A Leucine-rich repeat-con 100.0 4.4E-29 1.5E-33 278.5 22.0 252 128-408 57-308 (452)
305 4fcg_A Uncharacterized protein 100.0 3.1E-29 1.1E-33 266.7 19.3 232 100-352 80-311 (328)
306 1ozn_A Reticulon 4 receptor; N 100.0 3.9E-29 1.3E-33 261.1 19.0 254 80-362 14-268 (285)
307 3zyj_A Leucine-rich repeat-con 100.0 7.2E-29 2.5E-33 275.8 22.2 254 126-408 44-297 (440)
308 1ozn_A Reticulon 4 receptor; N 100.0 4.6E-29 1.6E-33 260.5 19.4 208 75-284 30-239 (285)
309 3zyi_A Leucine-rich repeat-con 100.0 7.8E-29 2.7E-33 276.5 21.7 246 104-355 57-303 (452)
310 3zyj_A Leucine-rich repeat-con 100.0 8.9E-29 3E-33 275.0 21.8 248 79-355 45-292 (440)
311 1wwl_A Monocyte differentiatio 100.0 6.6E-31 2.3E-35 278.0 1.4 250 74-356 40-310 (312)
312 3o53_A Protein LRIM1, AGAP0063 100.0 2.7E-30 9.1E-35 274.1 5.3 258 78-350 11-270 (317)
313 3g06_A SSPH2 (leucine-rich rep 100.0 7.2E-28 2.5E-32 275.5 24.3 268 78-390 41-308 (622)
314 3o53_A Protein LRIM1, AGAP0063 100.0 3.9E-30 1.4E-34 272.8 3.6 266 103-407 12-280 (317)
315 3g06_A SSPH2 (leucine-rich rep 100.0 1.8E-27 6.1E-32 272.3 25.5 263 101-408 40-302 (622)
316 1wwl_A Monocyte differentiatio 100.0 6.5E-30 2.2E-34 270.4 3.9 253 120-404 38-310 (312)
317 3oja_A Leucine-rich immune mol 99.9 1.1E-28 3.6E-33 277.0 9.0 236 124-398 33-270 (487)
318 4azs_A Methyltransferase WBDD; 99.9 7.2E-29 2.5E-33 282.1 7.5 186 523-718 242-436 (569)
319 3oja_A Leucine-rich immune mol 99.9 3E-28 1E-32 273.3 9.4 238 98-350 31-270 (487)
320 2o6q_A Variable lymphocyte rec 99.9 1.1E-26 3.7E-31 240.3 20.2 216 47-284 3-219 (270)
321 2z62_A TOLL-like receptor 4, v 99.9 6E-26 2.1E-30 235.6 19.7 210 198-409 29-243 (276)
322 2z62_A TOLL-like receptor 4, v 99.9 9.9E-26 3.4E-30 234.0 18.1 205 150-355 29-237 (276)
323 3ogk_B Coronatine-insensitive 99.9 2.5E-28 8.5E-33 282.6 -4.7 323 79-404 140-527 (592)
324 3rfs_A Internalin B, repeat mo 99.9 7.9E-25 2.7E-29 226.5 16.8 210 98-319 38-247 (272)
325 2o6q_A Variable lymphocyte rec 99.9 2.7E-24 9.1E-29 222.3 20.6 205 175-407 18-222 (270)
326 3m19_A Variable lymphocyte rec 99.9 1.7E-24 5.7E-29 221.3 18.7 190 47-258 3-192 (251)
327 3rfs_A Internalin B, repeat mo 99.9 2.7E-25 9.1E-30 230.1 11.9 209 75-295 39-247 (272)
328 3en9_A Glycoprotease, O-sialog 99.9 6.6E-26 2.3E-30 256.3 7.2 186 518-720 339-538 (540)
329 3goz_A Leucine-rich repeat-con 99.9 1.6E-26 5.4E-31 249.8 0.9 258 82-360 3-302 (362)
330 1p9a_G Platelet glycoprotein I 99.9 3.5E-24 1.2E-28 223.4 18.6 206 169-406 6-211 (290)
331 1p9a_G Platelet glycoprotein I 99.9 3.2E-24 1.1E-28 223.7 17.5 204 193-428 6-210 (290)
332 2ca6_A RAN GTPase-activating p 99.9 1.4E-26 4.8E-31 252.8 -1.2 189 194-382 91-319 (386)
333 3goz_A Leucine-rich repeat-con 99.9 3.7E-26 1.3E-30 247.0 1.8 256 105-381 2-299 (362)
334 2xwt_C Thyrotropin receptor; s 99.9 4.3E-24 1.5E-28 216.6 16.4 178 78-258 32-218 (239)
335 2ast_B S-phase kinase-associat 99.9 9.3E-26 3.2E-30 241.4 3.6 237 47-328 35-282 (336)
336 2ast_B S-phase kinase-associat 99.9 1.2E-25 4E-30 240.7 3.1 252 127-408 49-311 (336)
337 3ogk_B Coronatine-insensitive 99.9 4.4E-26 1.5E-30 263.7 -0.4 323 75-400 162-548 (592)
338 2ca6_A RAN GTPase-activating p 99.9 6E-26 2E-30 247.8 0.1 245 93-358 24-319 (386)
339 4glp_A Monocyte differentiatio 99.9 2.5E-24 8.7E-29 227.3 12.5 205 101-332 91-308 (310)
340 4glp_A Monocyte differentiatio 99.9 6.5E-24 2.2E-28 224.1 11.2 108 126-233 65-181 (310)
341 2xwt_C Thyrotropin receptor; s 99.9 3.8E-23 1.3E-27 209.6 15.3 197 101-328 31-236 (239)
342 1h6u_A Internalin H; cell adhe 99.9 5.1E-23 1.8E-27 216.8 12.7 107 266-380 125-231 (308)
343 1h6u_A Internalin H; cell adhe 99.9 5.8E-23 2E-27 216.4 12.5 213 173-404 19-231 (308)
344 2p1m_B Transport inhibitor res 99.9 9.7E-26 3.3E-30 261.0 -9.8 326 75-403 103-494 (594)
345 2p1m_B Transport inhibitor res 99.9 3.7E-25 1.3E-29 256.1 -5.1 341 60-403 105-519 (594)
346 2o6s_A Variable lymphocyte rec 99.9 2E-22 6.8E-27 199.5 14.4 184 49-246 7-190 (208)
347 3m19_A Variable lymphocyte rec 99.9 6.1E-22 2.1E-26 202.2 18.4 181 223-407 16-196 (251)
348 4ay9_X Follicle-stimulating ho 99.9 4.2E-22 1.4E-26 214.0 16.6 221 101-328 30-256 (350)
349 4ay9_X Follicle-stimulating ho 99.9 5E-22 1.7E-26 213.4 17.0 239 105-352 13-256 (350)
350 1zar_A RIO2 kinase; serine kin 99.9 7.5E-23 2.6E-27 211.9 8.6 166 509-705 84-274 (282)
351 3cvr_A Invasion plasmid antige 99.9 1.8E-22 6.3E-27 228.0 11.9 209 45-317 39-253 (571)
352 2o6s_A Variable lymphocyte rec 99.9 4.5E-21 1.5E-25 189.8 16.4 161 126-294 29-189 (208)
353 3cvr_A Invasion plasmid antige 99.8 9.8E-21 3.4E-25 213.8 15.7 191 102-343 60-255 (571)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 6E-21 2E-25 190.3 9.4 157 249-409 15-172 (220)
355 2v9t_B SLIT homolog 2 protein 99.8 8.8E-21 3E-25 189.1 9.6 157 248-408 14-170 (220)
356 3e6j_A Variable lymphocyte rec 99.8 6.6E-20 2.3E-24 184.1 15.5 160 46-213 16-175 (229)
357 1m9s_A Internalin B; cell inva 99.8 3.8E-20 1.3E-24 211.4 14.3 190 151-357 23-212 (605)
358 4b8c_D Glucose-repressible alc 99.8 3.7E-21 1.3E-25 225.5 5.8 219 2-239 130-359 (727)
359 1h6t_A Internalin B; cell adhe 99.8 2.3E-20 7.9E-25 194.7 11.0 171 196-381 45-215 (291)
360 2xot_A Amphoterin-induced prot 99.8 8.5E-20 2.9E-24 196.8 15.2 157 78-234 40-202 (361)
361 1h6t_A Internalin B; cell adhe 99.8 1.7E-20 6E-25 195.6 9.0 188 79-283 26-213 (291)
362 1m9s_A Internalin B; cell inva 99.8 6.3E-20 2.2E-24 209.6 13.5 205 171-392 19-223 (605)
363 2v9t_B SLIT homolog 2 protein 99.8 2.8E-19 9.6E-24 178.2 15.3 133 77-209 32-164 (220)
364 3e6j_A Variable lymphocyte rec 99.8 2.6E-19 9E-24 179.7 15.2 156 247-407 21-176 (229)
365 1dce_A Protein (RAB geranylger 99.8 1.2E-21 4.3E-26 222.4 -3.4 216 147-397 347-567 (567)
366 2xot_A Amphoterin-induced prot 99.8 1.4E-19 4.7E-24 195.2 12.7 174 81-257 22-201 (361)
367 1dce_A Protein (RAB geranylger 99.8 1.8E-21 6E-26 221.2 -2.5 217 122-373 346-567 (567)
368 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-19 1.2E-23 177.5 14.0 131 79-209 34-165 (220)
369 4b8c_D Glucose-repressible alc 99.8 1.6E-19 5.5E-24 211.6 7.1 184 188-406 215-407 (727)
370 1xeu_A Internalin C; cellular 99.8 3.8E-19 1.3E-23 182.4 8.6 80 270-355 106-185 (263)
371 1xeu_A Internalin C; cellular 99.8 4.3E-19 1.5E-23 182.0 8.6 169 124-332 18-186 (263)
372 4ezg_A Putative uncharacterize 99.8 1.1E-18 3.6E-23 171.0 9.8 153 98-258 41-194 (197)
373 4ezg_A Putative uncharacterize 99.8 2.9E-18 9.9E-23 167.8 12.0 153 122-283 41-194 (197)
374 1zth_A RIO1 serine protein kin 99.8 2.4E-18 8.3E-23 175.9 11.4 140 516-670 48-219 (258)
375 1w8a_A SLIT protein; signaling 99.7 1.1E-18 3.8E-23 169.9 8.2 156 273-431 11-167 (192)
376 3sb4_A Hypothetical leucine ri 99.7 3.4E-19 1.1E-23 189.6 3.2 260 124-397 48-328 (329)
377 1w8a_A SLIT protein; signaling 99.7 5.2E-17 1.8E-21 158.0 13.8 129 82-213 13-142 (192)
378 2wfh_A SLIT homolog 2 protein 99.7 2E-17 7E-22 160.9 8.1 132 273-408 13-144 (193)
379 2ell_A Acidic leucine-rich nuc 99.7 9.3E-17 3.2E-21 152.7 11.3 132 101-234 24-160 (168)
380 2ell_A Acidic leucine-rich nuc 99.7 6.7E-17 2.3E-21 153.7 10.0 135 75-211 22-161 (168)
381 2o6r_A Variable lymphocyte rec 99.7 2.2E-16 7.4E-21 151.6 12.8 113 101-213 28-140 (177)
382 3sb4_A Hypothetical leucine ri 99.7 1.1E-16 3.6E-21 170.2 10.7 259 75-348 47-327 (329)
383 2je0_A Acidic leucine-rich nuc 99.7 7.1E-17 2.4E-21 150.2 8.1 128 77-229 17-148 (149)
384 2je0_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 148.8 8.7 129 124-254 16-149 (149)
385 4fdw_A Leucine rich hypothetic 99.7 2.4E-15 8.2E-20 163.3 19.7 240 101-355 113-358 (401)
386 2o6r_A Variable lymphocyte rec 99.6 6.4E-16 2.2E-20 148.3 11.7 135 271-408 8-142 (177)
387 4fdw_A Leucine rich hypothetic 99.6 5E-15 1.7E-19 160.8 18.6 264 123-401 111-381 (401)
388 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.6E-20 148.0 12.7 127 80-210 13-139 (193)
389 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-16 3.7E-21 169.5 4.9 144 513-670 93-265 (397)
390 4fs7_A Uncharacterized protein 99.6 1.2E-13 4E-18 150.6 23.1 311 72-400 66-376 (394)
391 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-15 9.3E-20 143.7 8.1 132 97-234 15-153 (176)
392 1ds9_A Outer arm dynein; leuci 99.6 3.1E-17 1E-21 160.6 -6.2 132 101-237 18-156 (198)
393 1ds9_A Outer arm dynein; leuci 99.6 1.2E-16 4.2E-21 156.4 -2.7 161 217-403 14-185 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 5.7E-15 2E-19 141.4 8.2 131 74-210 16-153 (176)
395 3g39_A Variable lymphocyte rec 99.5 4.3E-14 1.5E-18 134.3 9.8 108 297-407 12-119 (170)
396 3g39_A Variable lymphocyte rec 99.5 2.7E-13 9.1E-18 128.8 12.4 103 81-186 13-115 (170)
397 4fs7_A Uncharacterized protein 99.5 2.6E-12 8.8E-17 139.9 21.9 316 61-395 72-393 (394)
398 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 131.3 9.9 107 298-407 16-122 (174)
399 2r9u_A Variable lymphocyte rec 99.4 5.6E-13 1.9E-17 127.0 12.1 104 80-186 15-118 (174)
400 4gt6_A Cell surface protein; l 99.4 1.4E-11 4.9E-16 134.0 21.0 297 92-401 54-368 (394)
401 3un9_A NLR family member X1; l 99.4 7.4E-15 2.5E-19 157.9 -6.2 166 197-386 72-259 (372)
402 2ifg_A High affinity nerve gro 99.3 1.8E-12 6.2E-17 138.6 10.7 96 88-186 20-116 (347)
403 4gt6_A Cell surface protein; l 99.3 4.4E-11 1.5E-15 130.1 21.6 311 77-402 64-390 (394)
404 3un9_A NLR family member X1; l 99.3 2.2E-14 7.6E-19 154.1 -5.1 187 173-379 72-283 (372)
405 2ifg_A High affinity nerve gro 99.3 9.2E-12 3.2E-16 133.1 11.4 106 104-212 11-118 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 5.9E-11 2E-15 121.4 13.8 148 510-669 9-213 (263)
407 4h09_A Hypothetical leucine ri 99.1 5.1E-09 1.8E-13 113.1 22.1 284 77-374 46-341 (379)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 2.6E-10 8.9E-15 116.4 10.7 138 515-669 20-214 (264)
409 2ra8_A Uncharacterized protein 99.1 2.9E-11 1E-15 128.6 2.1 85 292-377 250-341 (362)
410 2ra8_A Uncharacterized protein 99.0 1.2E-10 4E-15 124.0 5.6 84 316-401 250-341 (362)
411 4h09_A Hypothetical leucine ri 99.0 1.1E-08 3.7E-13 110.5 18.9 291 96-400 41-343 (379)
412 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6E-14 115.9 11.6 143 519-669 42-248 (359)
413 3rw6_A Nuclear RNA export fact 98.8 1.1E-10 3.8E-15 117.6 -3.5 63 123-187 168-234 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 1.6E-09 5.4E-14 113.3 4.2 185 520-720 25-287 (304)
415 3r70_A Aminoglycoside phosphot 98.6 7.9E-08 2.7E-12 101.0 10.0 137 516-670 38-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 1.3E-08 4.4E-13 97.6 -0.1 92 265-356 31-137 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.4E-08 4.8E-13 97.4 -0.0 115 241-355 32-164 (185)
418 3rw6_A Nuclear RNA export fact 98.4 2.7E-08 9.4E-13 100.2 0.3 79 316-396 168-257 (267)
419 3d1u_A Putative fructosamine-3 98.4 2.2E-06 7.6E-11 88.1 12.7 77 518-601 18-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 2.4E-06 8.1E-11 87.3 11.9 142 514-669 24-223 (272)
421 3tdw_A Gentamicin resistance p 98.2 5.7E-06 2E-10 86.0 11.8 138 519-670 23-225 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 8E-06 2.8E-10 87.0 12.6 146 516-670 42-244 (362)
423 3ats_A Putative uncharacterize 98.2 4.7E-06 1.6E-10 88.9 10.1 83 520-602 25-121 (357)
424 3e4g_A ATP synthase subunit S, 98.1 6.9E-07 2.4E-11 83.3 1.0 83 126-208 62-150 (176)
425 3e4g_A ATP synthase subunit S, 98.0 1.4E-06 4.7E-11 81.3 2.5 83 295-377 62-150 (176)
426 2olc_A MTR kinase, methylthior 98.0 3.3E-05 1.1E-09 83.5 12.4 78 520-599 35-120 (397)
427 2q83_A YTAA protein; 2635576, 97.8 8.3E-05 2.8E-09 78.5 11.6 141 521-669 38-252 (346)
428 2pyw_A Uncharacterized protein 97.6 0.00036 1.2E-08 75.9 13.8 76 639-716 232-312 (420)
429 3jr1_A Putative fructosamine-3 97.6 0.00019 6.4E-09 74.3 10.6 139 519-665 40-232 (312)
430 3f7w_A Putative fructosamine-3 97.6 0.00037 1.3E-08 71.5 11.8 79 515-600 15-96 (288)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 1.7E-05 5.7E-10 75.4 0.6 14 294-307 70-83 (197)
432 1pgv_A TMD-1, tropomodulin TMD 97.5 2E-05 6.8E-10 74.9 1.2 114 289-402 36-169 (197)
433 2ppq_A HSK, HK, homoserine kin 97.2 0.0016 5.6E-08 67.8 11.6 159 505-669 7-217 (322)
434 3csv_A Aminoglycoside phosphot 97.2 0.0012 4E-08 69.3 10.5 142 521-670 24-218 (333)
435 3dxq_A Choline/ethanolamine ki 97.2 0.0013 4.3E-08 68.0 10.4 139 520-670 23-203 (301)
436 1zyl_A Hypothetical protein YI 97.2 0.0031 1.1E-07 65.8 13.2 142 521-669 32-223 (328)
437 3rfe_A Platelet glycoprotein I 97.1 0.00056 1.9E-08 60.6 5.6 60 346-407 12-72 (130)
438 1nw1_A Choline kinase (49.2 KD 96.8 0.0024 8.1E-08 69.4 8.8 71 520-599 78-157 (429)
439 3feg_A Choline/ethanolamine ki 96.7 0.0033 1.1E-07 66.7 8.5 141 521-669 56-254 (379)
440 2qg7_A Ethanolamine kinase PV0 96.6 0.0068 2.3E-07 66.2 10.3 73 520-600 113-187 (458)
441 2yle_A Protein spire homolog 1 96.4 0.012 4.3E-07 55.9 9.3 103 599-719 33-135 (229)
442 3c5i_A Choline kinase; choline 96.4 0.0035 1.2E-07 66.7 6.3 73 520-600 38-120 (369)
443 3rfe_A Platelet glycoprotein I 96.3 0.0049 1.7E-07 54.4 6.0 7 107-113 14-20 (130)
444 3i1a_A Spectinomycin phosphotr 96.1 0.014 4.9E-07 61.1 9.3 31 639-669 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.9 0.026 8.7E-07 60.1 9.8 145 521-669 58-280 (401)
446 3mes_A Choline kinase; malaria 94.8 0.12 4.2E-06 55.4 10.8 73 520-600 75-156 (424)
447 2ks1_B Epidermal growth factor 91.4 0.13 4.6E-06 34.8 2.7 29 453-481 13-41 (44)
448 2l2t_A Receptor tyrosine-prote 90.8 0.12 4E-06 35.0 2.0 29 453-481 12-40 (44)
449 3g15_A CK, chetk-alpha, cholin 90.3 0.73 2.5E-05 49.1 9.0 29 641-669 246-280 (401)
450 4ann_A ESSB; membrane protein, 89.0 0.86 3E-05 43.3 7.3 116 572-722 43-159 (215)
451 2jwa_A Receptor tyrosine-prote 83.8 0.68 2.3E-05 31.3 2.4 27 454-480 14-40 (44)
452 4ano_A ESSB; membrane protein, 80.7 3.9 0.00013 39.0 7.5 115 572-722 48-164 (219)
453 3cxl_A N-chimerin; SH2, RHO-GA 76.6 0.28 9.4E-06 53.5 -2.1 63 518-584 145-214 (463)
454 2k9y_A Ephrin type-A receptor 71.7 1.5 5.1E-05 29.3 1.4 25 453-477 15-39 (41)
455 2l8s_A Integrin alpha-1; trans 68.9 2.2 7.6E-05 30.1 1.8 24 449-472 8-31 (54)
456 2lz0_A Uncharacterized protein 64.7 18 0.00061 29.5 6.9 46 88-134 7-52 (100)
457 2knc_A Integrin alpha-IIB; tra 64.6 3.7 0.00013 29.1 2.2 24 449-472 11-34 (54)
458 1iij_A ERBB-2 receptor protein 62.0 3.3 0.00011 26.3 1.4 25 454-478 10-34 (35)
459 2k1k_A Ephrin type-A receptor 60.7 4.6 0.00016 26.4 1.9 23 455-477 14-37 (38)
460 2k1a_A Integrin alpha-IIB; sin 56.5 5.6 0.00019 26.6 1.8 24 449-472 9-32 (42)
461 3ls8_A Phosphatidylinositol 3- 54.0 51 0.0017 36.5 10.1 47 615-668 453-501 (614)
462 2lz0_A Uncharacterized protein 46.1 52 0.0018 26.7 6.7 45 113-158 8-52 (100)
463 1zza_A Stannin, AG8_1; helix, 40.9 28 0.00095 25.8 3.6 31 455-485 18-48 (90)
464 2x6h_A GH13170P, VPS34, phosph 28.1 81 0.0028 35.6 6.6 45 617-668 529-575 (696)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.3e-56 Score=529.18 Aligned_cols=337 Identities=38% Similarity=0.558 Sum_probs=264.0
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcC-ccCCCcCcEEeecCCCccc----------------
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPT-LGNLSNLAVLHLYGNSLSG---------------- 163 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~---------------- 163 (784)
++|++|+|++|.+++.+|..|+.+++|++|+|++|.+++.+|.. +..+++|++|+|++|.+++
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 55666666666666677777777777777777777776555543 5555555555554444443
Q ss_pred -----------------------------------ccCCccccccccceeeccccccCCCccccccCccCCceeeccccc
Q 042086 164 -----------------------------------SIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENS 208 (784)
Q Consensus 164 -----------------------------------~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 208 (784)
.+|..+.++++|++|+|++|.+++.+|..+..+++|+.|++++|.
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 344445555566666666666666666666666666666666666
Q ss_pred cCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCc
Q 042086 209 LFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPR 288 (784)
Q Consensus 209 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 288 (784)
+++.+|..+..+++|++|++++|++++.+|..+..+++|++|+|++|+++ +.+|.++..+++|++|++++|++++.+|.
T Consensus 454 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 532 (768)
T 3rgz_A 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT-GEIPKWIGRLENLAILKLSNNSFSGNIPA 532 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC-SCCCGGGGGCTTCCEEECCSSCCEEECCG
T ss_pred ccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccC-CcCChHHhcCCCCCEEECCCCcccCcCCH
Confidence 66667777777777777777777777777777777777888888887776 56777788888888888888888888888
Q ss_pred cccCCCccceeecccCccCCCCcccc------------------------------------------------------
Q 042086 289 ALGSLTELEYLDLSTNKLGNSIPETL------------------------------------------------------ 314 (784)
Q Consensus 289 ~l~~l~~L~~L~Ls~n~l~~~~~~~l------------------------------------------------------ 314 (784)
.+..+++|+.|++++|.+++.+|..+
T Consensus 533 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 612 (768)
T 3rgz_A 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP 612 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCC
T ss_pred HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccc
Confidence 88888888888888888877666543
Q ss_pred ----------------cccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCcc
Q 042086 315 ----------------GNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNF 378 (784)
Q Consensus 315 ----------------~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 378 (784)
..+++|+.|+|++|++++.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|||++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 2356788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcccccCCCCCCCCCCCCCCCCCCC
Q 042086 379 SGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCGDIKGFQSCNATF 440 (784)
Q Consensus 379 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~c~~~~ 440 (784)
+|.+|..+..+++|++||+++|+++|.+|....|..++..++.||+++||.|.. .|....
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~--~C~~~~ 752 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP--RCDPSN 752 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC--CCCSCC
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc--CCCCCc
Confidence 999999999999999999999999999999999999999999999999999853 786443
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.8e-53 Score=441.05 Aligned_cols=254 Identities=21% Similarity=0.336 Sum_probs=207.9
Q ss_pred cCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
..+++.+.||+|+||+||+|++. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 35677899999999999999863 57899999997542 33456789999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC
Q 042086 589 SFLVYEYLERGSLATILSNDGA-------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 655 (784)
.++|||||++|+|.++++.... ...++|..+.+|+.|||+||+|||++ +||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 9999999999999999965421 23589999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCC--CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 042086 656 DYEARVSDFGIAKFLKPDS--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSN 732 (784)
Q Consensus 656 ~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~ 732 (784)
++.+||+|||+|+.+.... .......||++|||||++.+..++.++|||||||++|||+| |+.||......
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------ 254 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------ 254 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------
Confidence 9999999999998764332 22345679999999999999999999999999999999998 89999743321
Q ss_pred cccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 733 RNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 733 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.....+.+......+..++ .++.+++.+||+.||++||||+||++.|
T Consensus 255 --~~~~~i~~~~~~~~p~~~~---~~~~~li~~C~~~dP~~RPs~~ei~~~L 301 (308)
T 4gt4_A 255 --DVVEMIRNRQVLPCPDDCP---AWVYALMIECWNEFPSRRPRFKDIHSRL 301 (308)
T ss_dssp --HHHHHHHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHcCCCCCCcccch---HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 1111222222222223333 3578899999999999999999999865
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.2e-53 Score=441.62 Aligned_cols=253 Identities=25% Similarity=0.451 Sum_probs=206.8
Q ss_pred cCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
++|.+.+.||+|+||+||+|++. +++.||||+++.. +....++|.+|++++++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 46888999999999999999864 4788999999753 23346789999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc
Q 042086 589 SFLVYEYLERGSLATILSNDG----------AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE 658 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 658 (784)
.++|||||++|+|.++++..+ ....++|..+.+|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999997643 234699999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 042086 659 ARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNI 735 (784)
Q Consensus 659 ~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 735 (784)
+||+|||+|+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--------~ 238 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------E 238 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------H
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------H
Confidence 999999999876543322 233568999999999999999999999999999999999 89999743321 1
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 736 SLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 736 ~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+........+...+ .++.+++.+||+.||++||||+||++.|
T Consensus 239 ~~~~i~~~~~~~~p~~~~---~~~~~li~~cl~~dP~~RPs~~~i~~~L 284 (299)
T 4asz_A 239 VIECITQGRVLQRPRTCP---QEVYELMLGCWQREPHMRKNIKGIHTLL 284 (299)
T ss_dssp HHHHHHHTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccch---HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 111222222222223333 3578899999999999999999998764
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-52 Score=442.33 Aligned_cols=252 Identities=25% Similarity=0.455 Sum_probs=200.9
Q ss_pred cCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
++|.+.+.||+|+||+||+|+++ +++.||||+++.. +....++|.+|++++++++|||||+++|+|.+++.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 45778899999999999999864 4789999999753 23346789999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC
Q 042086 589 SFLVYEYLERGSLATILSNDGA------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD 656 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~ 656 (784)
.++|||||++|+|.++++.... ...++|..+.+|+.|||+||+|||++ +||||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999976432 23589999999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCC--cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccc
Q 042086 657 YEARVSDFGIAKFLKPDSS--NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNR 733 (784)
Q Consensus 657 ~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~ 733 (784)
+.+||+|||+|+.+..... ......||+.|||||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------ 268 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------ 268 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH------
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH------
Confidence 9999999999987654322 2345679999999999999999999999999999999999 899997433211
Q ss_pred ccccccccCC-CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 734 NISLNEILDP-RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 734 ~~~~~~~~d~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+... ++..+ ...+ .++.+++.+||+.||++||||+||++.|
T Consensus 269 --~~~~i~~g~~~~~p-~~~~---~~~~~li~~cl~~dP~~RPs~~ei~~~L 314 (329)
T 4aoj_A 269 --AIDCITQGRELERP-RACP---PEVYAIMRGCWQREPQQRHSIKDVHARL 314 (329)
T ss_dssp --HHHHHHHTCCCCCC-TTCC---HHHHHHHHHHCCSSTTTSCCHHHHHHHH
T ss_pred --HHHHHHcCCCCCCc-cccc---HHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 11112121 22222 2233 3578899999999999999999999764
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.4e-52 Score=431.51 Aligned_cols=256 Identities=25% Similarity=0.399 Sum_probs=199.8
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.+++++.+.||+|+||+||+|++++ .||||+++.... +....++|.+|+.++++++|||||+++|++.+ +..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 4578899999999999999998753 699999875422 22345789999999999999999999999865 5689999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
|||++|+|.++++... ..++|..+.+|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999997643 3689999999999999999999999 9999999999999999999999999999876532
Q ss_pred C--Cccccccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 674 S--SNCTELVGTFGYIAPELVYT---MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 674 ~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
. ......+||+.|||||++.+ .+++.++|||||||++|||+||+.||........ ...........+.+...
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~---~~~~~~~~~~~p~~~~~ 262 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVGRGYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHTTCCCCCSTTS
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH---HHHHHhcCCCCCCcccc
Confidence 2 22345689999999999863 4689999999999999999999999974332110 00000011122222222
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+... ..++.+++.+||+.||++||||+||++.|
T Consensus 263 ~~~~---~~~l~~li~~cl~~dP~~RPs~~ei~~~L 295 (307)
T 3omv_A 263 YKNC---PKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp CTTS---CHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred cccc---hHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 2222 34678899999999999999999998753
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.1e-52 Score=441.09 Aligned_cols=252 Identities=21% Similarity=0.328 Sum_probs=204.5
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.. +|+.||||++...... ....+.|.+|++++++++|||||++++++.+++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999875 7999999999764322 223567999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++...+. ..+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999975432 3578889999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... ......+.....+..+...
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~~~~~~~~- 249 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIISGSFPPVSLHY- 249 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCCCTTS-
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCCCCCCCccC-
Confidence 3334556899999999999999999999999999999999999999974321 1112222332322222222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 754 DELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..++.+|+.+||+.||++|||++|+++
T Consensus 250 --s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 --SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 335788999999999999999999985
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-51 Score=434.97 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=210.5
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
..|++.+.||+|+||+||+|+.+ +|+.||||++... .....+.+.+|+.+++.++|||||++++++.+++..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~---~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGG---GCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46999999999999999999976 7999999999754 2334667899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 999999999999753 488999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||....... ....+.+.. ........
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--------~~~~i~~~~-~~~~~~~~ 294 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRDNL-PPRLKNLH 294 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSS-CCCCSCGG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHcCC-CCCCCccc
Confidence 556677899999999999999999999999999999999999999996432211 011111111 11111122
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 754 DELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....++.+|+.+||+.||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 23446889999999999999999999975
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-51 Score=426.88 Aligned_cols=248 Identities=22% Similarity=0.351 Sum_probs=209.1
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.........+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999875 79999999997543333445678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999997654 588899999999999999999999 9999999999999999999999999999987543
Q ss_pred C--CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 674 S--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 674 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
. ......+||+.|||||++.+..++.++||||+||++|||+||+.||..... ......+.......+. .
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~~~~p~-~ 256 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLEYDFPE-K 256 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCT-T
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCc-c
Confidence 3 234567899999999999999999999999999999999999999963221 1111222222222221 2
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTV 780 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~v 780 (784)
. ..++.+|+.+||+.||++|||++|+
T Consensus 257 ~---s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 257 F---FPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp C---CHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred c---CHHHHHHHHHHccCCHhHCcChHHH
Confidence 2 2357889999999999999999885
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-50 Score=414.53 Aligned_cols=248 Identities=23% Similarity=0.320 Sum_probs=192.4
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.........+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999875 79999999997755444555678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+ +|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 679999997654 588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||+.... ......+.......+ ...
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~~~p-~~~ 235 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVYTLP-KFL 235 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCC-TTS
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCC-CCC
Confidence 33455789999999999998876 5799999999999999999999973221 111112222222222 222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+.++.+++.+||+.||++|||++|+++
T Consensus 236 ---s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 ---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 235778999999999999999999986
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-49 Score=462.78 Aligned_cols=379 Identities=22% Similarity=0.282 Sum_probs=291.2
Q ss_pred hHHHHHHHHHHHhccCCCccccCCCCCCCCCCCccccccCCCCCCCccc---ceeEEcCCCCeEEEEeCCCcccC-----
Q 042086 3 GKEAYALLKWKTSLQKHNRSLLSSWTFYPVNNATNVSFYSKIKISPCAW---FGIQCNPAKRVISINLSTVGLKG----- 74 (784)
Q Consensus 3 ~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~~~~~~~~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~~~~----- 74 (784)
.+|++||.+|++++..++ |.... +.+.....|. .+.|||.| .||+|+..+||+.+++.+.++.|
T Consensus 29 ~~d~~aL~~~~~~~~~~~------w~~~~-~~~~~~~~W~-~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~ 100 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKN------WSQQG-FGTQPGANWN-FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDA 100 (636)
T ss_dssp HHHHHHHHHHHHHTTGGG------CCCCC-------CCCC-CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGG
T ss_pred HHHHHHHHHHHHHcCCCC------cccCC-cCCccCCCCC-CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChH
Confidence 369999999999996542 43110 0011111222 24789999 99999988999999999987754
Q ss_pred --CCCcccEEeCCCC-----------------------------------------------------------------
Q 042086 75 --NLKSLSTLDLSKN----------------------------------------------------------------- 87 (784)
Q Consensus 75 --~l~~l~~L~L~~n----------------------------------------------------------------- 87 (784)
+|++|++|+|++|
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 7899999999988
Q ss_pred -------------cccccCCCCcCCCCCCCEEEccCCccccc-----------------CCCCCC--CCCCCCEEEccCC
Q 042086 88 -------------KLNGSIPFSFGNLTNLAIMYLYRNSLSAS-----------------IPPVIG--NLKFLYHLDLSEN 135 (784)
Q Consensus 88 -------------~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~L~~n 135 (784)
+++| +|..|+++++|++|+|++|.+++. +|+.++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 4456 889999999999999999999986 999999 9999999999999
Q ss_pred ccCCCCCcCccCCCcCcEEeecCCC-ccc-ccCCccccc------cccceeeccccccCCCccc--cccCccCCceeecc
Q 042086 136 QLSGSIPPTLGNLSNLAVLHLYGNS-LSG-SIPSIIGNL------KSLFYLHLSSNQLSGSIPI--SLGNLSNLVVLHLF 205 (784)
Q Consensus 136 ~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~l~~l------~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~ 205 (784)
.+.+.+|..++++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|+++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECC
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCc
Confidence 9999999999999999999999998 998 899888887 99999999999999 8888 89999999999999
Q ss_pred ccccCCccchhhhcccccceeccCCCccccccCCCCcCCCC-cceEEecCCCCCCCCccccccccc--ccceEeccCccc
Q 042086 206 ENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNN-LIGLYLYDNQLSVGEIPIEIGKLS--SLNYLVLNGNQL 282 (784)
Q Consensus 206 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~n~l~~~~~~~~l~~l~--~L~~L~l~~n~l 282 (784)
+|++++.+| .+.++++|+.|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++++|.+
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L~Ls~N~l 414 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK--YIPNIFDAKSVSVMSAIDFSYNEI 414 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS--SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc--ccchhhhhcccCccCEEECcCCcC
Confidence 999998888 8999999999999999999 78888999998 999999999987 6777766544 788888888888
Q ss_pred cCCCCcccc-------CCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcc-------cccCeec
Q 042086 283 YGNLPRALG-------SLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKL-------IQLSELD 348 (784)
Q Consensus 283 ~~~~~~~l~-------~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l-------~~L~~L~ 348 (784)
++..|..+. .+++|++|+|++|.++...+..+..+++|++|+|++|+++...+..+... ++|+.|+
T Consensus 415 ~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 415 GSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSID 494 (636)
T ss_dssp TTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEE
T ss_pred CCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEE
Confidence 887777776 66677777777777774333334445666666666666653222222211 1555555
Q ss_pred cCCcccccccccccc--ccccccEEecCCCccCCCCcccccCcccceEEEc
Q 042086 349 LSLNILEGKIPCEIC--NMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDV 397 (784)
Q Consensus 349 Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l 397 (784)
|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 495 Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 495 LRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp CCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred CcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 5555555 4554444 55555555555555554 4555555555555555
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-50 Score=435.78 Aligned_cols=249 Identities=27% Similarity=0.404 Sum_probs=210.5
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
+.|++.+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+.+|+.++|||||+++++|.+++..||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~---~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST---TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 56999999999999999999976 7999999999754 2334677999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
|||++|+|.++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 228 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp ECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 999999999999753 488899999999999999999999 9999999999999999999999999999988766
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||.......... .......+.+... .
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-----~i~~~~~~~~~~~----~ 371 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKNL----H 371 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCSCT----T
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-----HHHcCCCCCCccc----c
Confidence 566677899999999999999999999999999999999999999996432211000 0011111122211 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 754 DELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....++.+|+.+||+.||++|||++|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22335788999999999999999999976
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.8e-51 Score=428.23 Aligned_cols=246 Identities=25% Similarity=0.266 Sum_probs=199.4
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
+.|++.++||+|+||+||+|+.+ +|+.||||+++... .+.+|+.+++.++|||||++++++.+++..|+||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~--------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH--------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46888899999999999999976 79999999997531 1247999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC-ceEEeccccccccCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKFLKP 672 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~~~~ 672 (784)
||+++|+|.++++..+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+..
T Consensus 130 Ey~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999998654 588999999999999999999999 999999999999999997 699999999998754
Q ss_pred CCCc-----ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042086 673 DSSN-----CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPT 747 (784)
Q Consensus 673 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 747 (784)
+... ....+||+.|||||++.+..++.++|||||||++|||+||+.||....... ....+.....+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--------~~~~i~~~~~~~ 275 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--------LCLKIASEPPPI 275 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--------CHHHHHHSCCGG
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHcCCCCc
Confidence 3221 234579999999999999999999999999999999999999997432211 111111111100
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 748 PPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 748 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
....+.....+.+++.+||+.||++|||+.|+++.
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 00111223357889999999999999999999865
No 13
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-50 Score=415.20 Aligned_cols=249 Identities=23% Similarity=0.364 Sum_probs=196.8
Q ss_pred CCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec----CCceEE
Q 042086 517 FDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH----PRNSFL 591 (784)
Q Consensus 517 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 591 (784)
|++.+.||+|+||+||+|++. +++.||+|++..... .....+.|.+|++++++++|||||++++++.+ +...++
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 367788999999999999876 689999999875422 22235679999999999999999999999864 345799
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC-CCceEEecccccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL-DYEARVSDFGIAKFL 670 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~~ 670 (784)
|||||++|+|.++++..+ .+++..+..++.||+.||+|||++. ++||||||||+|||++. ++.+||+|||+|+..
T Consensus 107 vmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999997643 5888999999999999999999981 13999999999999984 799999999999864
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
.. ......+||+.|||||++.+ .++.++|||||||++|||+||+.||....... .....+.....+. .
T Consensus 183 ~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-------~~~~~i~~~~~~~--~ 250 (290)
T 3fpq_A 183 RA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-------QIYRRVTSGVKPA--S 250 (290)
T ss_dssp CT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-------HHHHHHTTTCCCG--G
T ss_pred CC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-------HHHHHHHcCCCCC--C
Confidence 32 33456789999999998865 69999999999999999999999996322110 0001111111110 0
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00111235788999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-50 Score=419.51 Aligned_cols=249 Identities=24% Similarity=0.328 Sum_probs=199.3
Q ss_pred cCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 590 (784)
++|++.+.||+|+||+||+|+.. +++.||||+++..... ......+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-EEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-hHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 46999999999999999999863 5789999998754321 122446889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++|+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999998654 588899999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
..........+||+.|||||++.+..++.++||||+||++|||+||+.||..... ......+.......+ .
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~~~p-~ 247 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--------KETMTMILKAKLGMP-Q 247 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC-T
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--------HHHHHHHHcCCCCCC-C
Confidence 5555555677899999999999999999999999999999999999999974221 111122222233222 2
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPP-----MHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~~vl~ 782 (784)
.. +.++.+++.+||+.||++||| ++|+++
T Consensus 248 ~~---s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 248 FL---SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred cC---CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 22 235788999999999999998 467764
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-49 Score=418.18 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=196.5
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhH--HHHHHHHhccCCCceeeEEeEEecCC----c
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEF--VNEIKTLTELRHRSIVKFYGFCSHPR----N 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~l~~~~~~~~----~ 588 (784)
.+|.+.+.||+|+||+||+|+++ |+.||||++... ..+++ ..|+..+.+++|||||+++|++.+++ .
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~------~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~ 75 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc------chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence 35778899999999999999984 899999998653 12333 44566667889999999999997654 5
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEEeCCCCCCeeecCCCceEEec
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC-----FPPIVHRDISSKNVLLCLDYEARVSD 663 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~Dlk~~Nill~~~~~~kl~D 663 (784)
.++|||||++|+|.++++.. .++|..+.+++.|+|+||+|||+++ .++||||||||+|||++.++.+||+|
T Consensus 76 ~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 79999999999999999764 4899999999999999999999862 45899999999999999999999999
Q ss_pred cccccccCCCCCc----ccccccccccccccccccC------CcCcchhHHHHHHHHHHHHhCCCCCCcccccccc----
Q 042086 664 FGIAKFLKPDSSN----CTELVGTFGYIAPELVYTM------KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS---- 729 (784)
Q Consensus 664 fG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~---- 729 (784)
||+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~ 231 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc
Confidence 9999876543322 2345799999999999754 4678999999999999999998887543221100
Q ss_pred ---cccccccc----ccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 730 ---SSNRNISL----NEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 730 ---~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+... ....++.++... ...+....+.+++.+||+.||++||||.||++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 292 (303)
T 3hmm_A 232 VPSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred ccccchHHHHHHHHhcccCCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence 00000011 111222222111 1224556788999999999999999999999864
No 16
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.3e-50 Score=428.11 Aligned_cols=261 Identities=21% Similarity=0.360 Sum_probs=209.5
Q ss_pred HHHHHHhcCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCC-CceeeEE
Q 042086 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH-RSIVKFY 580 (784)
Q Consensus 508 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~ 580 (784)
.+++...++|++.+.||+|+||+||+|++. .++.||||++.... .....++|.+|++++++++| ||||+++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 445556688999999999999999999864 24689999987642 22235679999999999965 8999999
Q ss_pred eEEecC-CceEEEEecccCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCC
Q 042086 581 GFCSHP-RNSFLVYEYLERGSLATILSNDGA-------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646 (784)
Q Consensus 581 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 646 (784)
|+|.++ +..++|||||++|+|.++++.... ...++|..+..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999764 568999999999999999975321 23589999999999999999999999 9999999
Q ss_pred CCCCeeecCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 042086 647 SSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFI 723 (784)
Q Consensus 647 k~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~ 723 (784)
||+|||+++++.+||+|||+|+.+..+... .....||+.|||||++.+..++.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999976544332 345679999999999999999999999999999999998 99999743
Q ss_pred ccccccccccccccccccC-CCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 724 SSISSSSSNRNISLNEILD-PRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.... .....+.+ .++..+ ...+ .++.+++.+||+.||++||||+||++.|
T Consensus 292 ~~~~-------~~~~~i~~g~~~~~p-~~~~---~~~~~li~~c~~~dP~~RPt~~eil~~L 342 (353)
T 4ase_A 292 KIDE-------EFCRRLKEGTRMRAP-DYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHL 342 (353)
T ss_dssp CCSH-------HHHHHHHHTCCCCCC-TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CHHH-------HHHHHHHcCCCCCCC-ccCC---HHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 2211 00111111 122222 2232 3578899999999999999999999864
No 17
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.5e-48 Score=457.58 Aligned_cols=379 Identities=22% Similarity=0.293 Sum_probs=286.2
Q ss_pred hHHHHHHHHHHHhccCCCccccCCCCCCCCCCCccccccCCCCCCC--ccc------------ceeEEcCCCCeEEEEeC
Q 042086 3 GKEAYALLKWKTSLQKHNRSLLSSWTFYPVNNATNVSFYSKIKISP--CAW------------FGIQCNPAKRVISINLS 68 (784)
Q Consensus 3 ~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~~~~~~~~~~~~~~~--C~w------------~gv~C~~~~~v~~l~l~ 68 (784)
.+|+.||++||+++. +| +|+... .| ...+| |.| .||+|+..+||+.++|.
T Consensus 268 ~~d~~ALl~~k~~l~-~~-----~W~~~~--------~~--~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls 331 (876)
T 4ecn_A 268 IKDYKALKAIWEALD-GK-----NWRYYS--------GT--INNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLA 331 (876)
T ss_dssp HHHHHHHHHHHHHTT-GG-----GCCCCC--------SS--CSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECT
T ss_pred hHHHHHHHHHHHHcC-CC-----CCCcCC--------Cc--ccccCCccccccccccccccCcCceEecCCCCEEEEECc
Confidence 479999999999995 44 796421 01 12345 999 99999988999999999
Q ss_pred CCccc-------CCCCcccEEeC-CCCccccc------------------------------------------------
Q 042086 69 TVGLK-------GNLKSLSTLDL-SKNKLNGS------------------------------------------------ 92 (784)
Q Consensus 69 ~~~~~-------~~l~~l~~L~L-~~n~i~~~------------------------------------------------ 92 (784)
+.++. ++|++|+.|+| ++|.++|.
T Consensus 332 ~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp TTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred cCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 98775 47889999999 77766554
Q ss_pred ----------------------------CCCCcCCCCCCCEEEccCCcccc-----------------cCCCCCC--CCC
Q 042086 93 ----------------------------IPFSFGNLTNLAIMYLYRNSLSA-----------------SIPPVIG--NLK 125 (784)
Q Consensus 93 ----------------------------~~~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~l~--~l~ 125 (784)
+|..|+++++|++|+|++|.|++ .+|+.++ +++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~ 491 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLK 491 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCT
T ss_pred ccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCC
Confidence 78889999999999999999998 4999988 999
Q ss_pred CCCEEEccCCccCCCCCcCccCCCcCcEEeecCCC-ccc-ccCCcccccc-------ccceeeccccccCCCccc--ccc
Q 042086 126 FLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNS-LSG-SIPSIIGNLK-------SLFYLHLSSNQLSGSIPI--SLG 194 (784)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~l~~l~-------~L~~L~L~~n~l~~~~~~--~~~ 194 (784)
+|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|.++ .+|. .++
T Consensus 492 ~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~ 570 (876)
T 4ecn_A 492 DLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQ 570 (876)
T ss_dssp TCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHT
T ss_pred CCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhh
Confidence 99999999999999999999999999999999998 998 7888777766 9999999999999 8888 899
Q ss_pred CccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCC-cceEEecCCCCCCCCcccccccccc--
Q 042086 195 NLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNN-LIGLYLYDNQLSVGEIPIEIGKLSS-- 271 (784)
Q Consensus 195 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~n~l~~~~~~~~l~~l~~-- 271 (784)
++++|+.|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..++.
T Consensus 571 ~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~--~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 571 KMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK--YIPNIFNAKSVYV 645 (876)
T ss_dssp TCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC--SCCSCCCTTCSSC
T ss_pred cCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC--cCchhhhccccCC
Confidence 9999999999999998 777 8999999999999999999 78888999998 999999999987 67777666543
Q ss_pred cceEeccCccccCCCCccc---c--CCCccceeecccCccCCCCcccc-cccccceEEecccccccCCCchhhhc-----
Q 042086 272 LNYLVLNGNQLYGNLPRAL---G--SLTELEYLDLSTNKLGNSIPETL-GNLLKLHYLNLSNNQFRKGFPVELEK----- 340 (784)
Q Consensus 272 L~~L~l~~n~l~~~~~~~l---~--~l~~L~~L~Ls~n~l~~~~~~~l-~~l~~L~~L~ls~N~l~~~~~~~~~~----- 340 (784)
|+.|++++|++.+.+|... . .+++|+.|+|++|.++ .+|..+ ..+++|+.|+|++|+++. +|..+..
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~-ip~~~~~~~~~~ 723 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS-IPENSLKPKDGN 723 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC-CCTTSSSCTTSC
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc-cChHHhcccccc
Confidence 8888888888876554322 1 2235666666666665 333332 355555555555555553 3322211
Q ss_pred ---ccccCeeccCCcccccccccccc--ccccccEEecCCCccCCCCcccccCcccceEEEcCC------CCCcccCC
Q 042086 341 ---LIQLSELDLSLNILEGKIPCEIC--NMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSY------NELRGPIP 407 (784)
Q Consensus 341 ---l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~------N~l~~~~p 407 (784)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|
T Consensus 724 l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip 799 (876)
T 4ecn_A 724 YKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWP 799 (876)
T ss_dssp CTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCC
T ss_pred ccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccCh
Confidence 225555555555555 4555554 55555555555555555 355555555555555544 44444444
No 18
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.8e-49 Score=410.34 Aligned_cols=250 Identities=23% Similarity=0.418 Sum_probs=193.0
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC------
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR------ 587 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 587 (784)
++|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 35899999999999999999976 79999999986532 2223567999999999999999999999986544
Q ss_pred ------ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEE
Q 042086 588 ------NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARV 661 (784)
Q Consensus 588 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 661 (784)
..|+||||+++|+|.++++......+.++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3689999999999999998877666777888899999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCc------------ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc
Q 042086 662 SDFGIAKFLKPDSSN------------CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS 729 (784)
Q Consensus 662 ~DfG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~ 729 (784)
+|||+|+.+...... .+..+||+.|||||++.+..++.++|||||||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 999999877543221 234579999999999999999999999999999999996 7652111
Q ss_pred ccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 730 SSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 730 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......+.+...+ ....+......+++.+||+.||++|||+.|+++
T Consensus 233 ---~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 ---RVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ---HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111111111211 112233345678999999999999999999986
No 19
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=399.90 Aligned_cols=260 Identities=20% Similarity=0.314 Sum_probs=199.3
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec------CC
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH------PR 587 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 587 (784)
++|++.+.||+|+||+||+|+.. +|+.||||++...... ....+.+.+|+++|+.++|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 57999999999999999999975 7999999999764321 2234578899999999999999999998753 35
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 7899999996 68999997653 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC----CCcccccccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccc
Q 042086 668 KFLKPD----SSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-------SSNRNI 735 (784)
Q Consensus 668 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-------~~~~~~ 735 (784)
+.+... .......+||+.|||||++.+.. ++.++||||+||++|||++|+.||......... ......
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876432 22345678999999999988754 689999999999999999999999643211000 000000
Q ss_pred --------ccccccCCCCCCCCCCC----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 736 --------SLNEILDPRLPTPPQNV----QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 736 --------~~~~~~d~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.....+.......+... +....++.+|+.+||+.||++|||++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000000000000 011235789999999999999999999986
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.1e-44 Score=386.30 Aligned_cols=198 Identities=25% Similarity=0.327 Sum_probs=171.4
Q ss_pred HHHHhcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEe
Q 042086 510 IVRATNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCS 584 (784)
Q Consensus 510 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 584 (784)
+....+.|++.+.||+|+||+||+|+.+ +++.||+|++... ....++.+|+++++.+ +|||||++++++.
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-----SHPIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-----cCHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 3345678999999999999999999753 4789999998653 2356788999999998 6999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC-CceEEec
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD-YEARVSD 663 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~D 663 (784)
+.+..++||||+++|+|.++++ .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred ECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 9999999999999999999984 378899999999999999999999 99999999999999877 7999999
Q ss_pred cccccccCCCCC----------------------------cccccccccccccccccccCC-cCcchhHHHHHHHHHHHH
Q 042086 664 FGIAKFLKPDSS----------------------------NCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVI 714 (784)
Q Consensus 664 fG~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGv~l~ell 714 (784)
||+|+....... .....+||+.|+|||++.+.. ++.++||||+||++|||+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence 999986543211 123457999999999998764 889999999999999999
Q ss_pred hCCCCCC
Q 042086 715 KGDHPRD 721 (784)
Q Consensus 715 tg~~p~~ 721 (784)
||+.||.
T Consensus 242 ~G~~Pf~ 248 (361)
T 4f9c_A 242 SGRYPFY 248 (361)
T ss_dssp HTCSSSS
T ss_pred HCCCCCC
Confidence 9999985
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-44 Score=411.14 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=207.8
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.+ +|+.||+|++.... ....+.+.+|+.+|+.++|||||++++++.+++..++||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999876 79999999986532 223567899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC--CceEEeccccccccC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD--YEARVSDFGIAKFLK 671 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~--~~~kl~DfG~a~~~~ 671 (784)
|||++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 234 E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 234 EFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp ECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred eecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999996542 3588999999999999999999999 99999999999999865 899999999999876
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
.. ......+||+.|||||++.+..++.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 309 ~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~ 379 (573)
T 3uto_A 309 PK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDWNMDDSA 379 (573)
T ss_dssp TT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCCCCSGG
T ss_pred CC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCCCCCccc
Confidence 43 3345678999999999999999999999999999999999999999743221 11112222221111111
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
......++.+|+.+||+.||++|||++|+++
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1122346788999999999999999999986
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.4e-45 Score=409.81 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=200.6
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHH---HHHHhccCCCceeeEEeEEecCCceE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNE---IKTLTELRHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~~ 590 (784)
++|++.+.||+|+||+||+|+.+ +|+.||+|++.+...........+.+| +.+++.++|||||+++++|++++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56999999999999999999876 799999999865322222233344444 56677789999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||++||+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 9999999999999998654 588899999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
.... ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||....... .......+.......+
T Consensus 343 ~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~~~~~~p- 414 (689)
T 3v5w_A 343 SKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTMAVELP- 414 (689)
T ss_dssp SSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHHCCCCCC-
T ss_pred CCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcCCCCCCC-
Confidence 5432 345689999999999974 579999999999999999999999996322110 0011111222222222
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPP-----MHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~~vl~ 782 (784)
.. .+.++.+|+.+||+.||++|++ ++||.+
T Consensus 415 ~~---~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DS---FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TT---SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cc---CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 22 2335788999999999999998 677754
No 23
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-43 Score=422.56 Aligned_cols=281 Identities=39% Similarity=0.572 Sum_probs=206.8
Q ss_pred CCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCC-CCCCEEEccCCccCCCCCcCccCCCcCcEE
Q 042086 76 LKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNL-KFLYHLDLSENQLSGSIPPTLGNLSNLAVL 154 (784)
Q Consensus 76 l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 154 (784)
+++|++|+|++|++++.+|.. .+++|++|+|++|.+++.+|..+..+ ++|++|+|++|.+++.+|..|+.+++|++|
T Consensus 246 l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 323 (768)
T 3rgz_A 246 CTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESL 323 (768)
T ss_dssp CSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEE
Confidence 467999999999999988876 89999999999999999999998875 999999999999999999999999999999
Q ss_pred eecCCCcccccCCc-cccccccceeeccccccCCCccccccC---------------------------ccCCceeeccc
Q 042086 155 HLYGNSLSGSIPSI-IGNLKSLFYLHLSSNQLSGSIPISLGN---------------------------LSNLVVLHLFE 206 (784)
Q Consensus 155 ~L~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~~~---------------------------l~~L~~L~L~~ 206 (784)
+|++|.+++.+|.. +.++++|++|+|++|.+++.+|..+.. +++|+.|++++
T Consensus 324 ~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~ 403 (768)
T 3rgz_A 324 ALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403 (768)
T ss_dssp ECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCS
T ss_pred ECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCC
Confidence 99999999888865 788888888888888777665554432 33455555566
Q ss_pred cccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCC
Q 042086 207 NSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNL 286 (784)
Q Consensus 207 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 286 (784)
|++++.+|..+.++++|+.|+|++|++++.+|..+..+++|+.|++++|+++ +.+|..+..+++|++|++++|++++.+
T Consensus 404 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~ 482 (768)
T 3rgz_A 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE-GEIPQELMYVKTLETLILDFNDLTGEI 482 (768)
T ss_dssp SEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCC-SCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCccc-CcCCHHHcCCCCceEEEecCCcccCcC
Confidence 6665566777777777777777777777666766777777777777776665 455555666666666666666666666
Q ss_pred CccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCcccccccc
Q 042086 287 PRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIP 359 (784)
Q Consensus 287 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 359 (784)
|..+..+++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|
T Consensus 483 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip 555 (768)
T 3rgz_A 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCC
T ss_pred CHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCC
Confidence 6666666666666666666666666666666666666666666665555555555555555555555544444
No 24
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.1e-43 Score=373.58 Aligned_cols=278 Identities=33% Similarity=0.606 Sum_probs=228.6
Q ss_pred ccccHHHHHHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeE
Q 042086 503 GKILYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582 (784)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 582 (784)
..+.+.++....++|++.+.||+|+||.||+|+..+++.||||++..... ......+.+|+++++.++||||++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC--chHHHHHHHHHHHHHhccCCCccceEEE
Confidence 34567889999999999999999999999999988899999999876432 2234479999999999999999999999
Q ss_pred EecCCceEEEEecccCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEE
Q 042086 583 CSHPRNSFLVYEYLERGSLATILSNDGA-IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARV 661 (784)
Q Consensus 583 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 661 (784)
+.+++..++||||+++|+|.++++.... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 9999999999999999999999986543 345899999999999999999999987779999999999999999999999
Q ss_pred eccccccccCCCCCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc---------cc
Q 042086 662 SDFGIAKFLKPDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS---------SS 731 (784)
Q Consensus 662 ~DfG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~---------~~ 731 (784)
+|||+++........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||+........ ..
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999876543322 34456999999999999889999999999999999999999999632211100 11
Q ss_pred ccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 732 NRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 732 ~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
........+.+..... ....+....+.+++.+||+.||++|||++||++.|
T Consensus 256 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 256 LKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp TSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred hhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 1222233344444332 34467778899999999999999999999999875
No 25
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.5e-42 Score=388.51 Aligned_cols=333 Identities=24% Similarity=0.226 Sum_probs=285.7
Q ss_pred CCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccC-CCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEE
Q 042086 76 LKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASI-PPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVL 154 (784)
Q Consensus 76 l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 154 (784)
.++|++|+|++|+|++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 368999999999999998999999999999999999997554 5689999999999999999998889999999999999
Q ss_pred eecCCCcccccCCc--cccccccceeeccccccCCCcccc-ccCccCCceeeccccccCCccchhhhcc--cccceeccC
Q 042086 155 HLYGNSLSGSIPSI--IGNLKSLFYLHLSSNQLSGSIPIS-LGNLSNLVVLHLFENSLFGSIPSILGNL--KMLLHLGLS 229 (784)
Q Consensus 155 ~L~~n~l~~~~~~~--l~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~ 229 (784)
+|++|.+++..+.. |.++++|++|+|++|.+++..|.. +.++++|++|++++|++++..+..+..+ .+|+.|+++
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 99999998755544 889999999999999999877776 8899999999999999998888888776 567777777
Q ss_pred CCccccccCCC--------CcCCCCcceEEecCCCCCCCCccccc-----------------------------------
Q 042086 230 TNHLSGVIPLS--------IGNLNNLIGLYLYDNQLSVGEIPIEI----------------------------------- 266 (784)
Q Consensus 230 ~n~l~~~~~~~--------l~~l~~L~~L~L~~n~l~~~~~~~~l----------------------------------- 266 (784)
+|.+.+..+.. +..+++|++|++++|+++ +..|..+
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 267 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK-ESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNF 267 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCC-HHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCccc-ccchhhhhccccccceeeEeeccccccccccchhhhccCccc
Confidence 77777554433 234567777777777664 1111111
Q ss_pred --c--cccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhccc
Q 042086 267 --G--KLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLI 342 (784)
Q Consensus 267 --~--~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 342 (784)
. ..++|+.|++++|.+++..|..+..+++|++|++++|.+++..|..|.++++|++|+|++|++++..+..+..++
T Consensus 268 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (455)
T 3v47_A 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLD 347 (455)
T ss_dssp TTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCT
T ss_pred ccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcc
Confidence 1 125899999999999988899999999999999999999988888999999999999999999988889999999
Q ss_pred ccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC
Q 042086 343 QLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS 409 (784)
Q Consensus 343 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 409 (784)
+|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|+++|.+|..
T Consensus 348 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999999999999888999999999999999999999988888899999999999999999999853
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.8e-42 Score=364.33 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=208.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG---GCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc---cccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 468999999999999999999864 7999999998654 233467799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999764 478899999999999999999999 999999999999999999999999999988776
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.........||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ......+.... .
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~----~ 239 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-----IATNGTPELQN----P 239 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHHCSCCCSC----G
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHhCCCCCCCC----c
Confidence 55555667899999999999999999999999999999999999999964322110000 00000111111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
......+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 122345788999999999999999999986
No 27
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.6e-42 Score=369.47 Aligned_cols=268 Identities=35% Similarity=0.532 Sum_probs=219.7
Q ss_pred HHHHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 509 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
++...+++|++.+.||+|+||.||+|+.++++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 344467899999999999999999999888999999988754 23346789999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGA-IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
.++||||+++|+|.+++..... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999875432 23589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC--CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------cccccccc
Q 042086 668 KFLKPDS--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-------SNRNISLN 738 (784)
Q Consensus 668 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-------~~~~~~~~ 738 (784)
+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ........
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence 8754322 22344568999999999998899999999999999999999999986432211000 00112223
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 739 EILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 739 ~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.++++.... ....+....+.+++.+||+.||++|||++||++.|
T Consensus 267 ~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 267 QIVDPNLAD--KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp SSSSSSCTT--CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhcChhhcc--ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 344444332 23457778899999999999999999999999864
No 28
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-42 Score=367.90 Aligned_cols=258 Identities=31% Similarity=0.469 Sum_probs=199.9
Q ss_pred HHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
...++|++.+.||+|+||+||+|+. +|+.||||++..... .....++|.+|++++++++||||+++++++.+.+..++
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 3456899999999999999999987 488999999876422 22234678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP--IVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
||||+++|+|.+++...+....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 999999999999998765444589999999999999999999998 8 99999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
............||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ......+...+
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~------~~~~~~~~~~~- 261 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA------VGFKCKRLEIP- 261 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH------HHHSCCCCCCC-
T ss_pred ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhcCCCCCCC-
Confidence 65444444567899999999999999999999999999999999999999974322110000 00011111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
... ...+.+++.+||+.||++|||++++++.|
T Consensus 262 ~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~~L 293 (309)
T 3p86_A 262 RNL---NPQVAAIIEGCWTNEPWKRPSFATIMDLL 293 (309)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 122 23578899999999999999999999864
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.1e-41 Score=362.48 Aligned_cols=261 Identities=26% Similarity=0.391 Sum_probs=213.9
Q ss_pred ccccHHHHHHHhcC----------CCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc
Q 042086 503 GKILYEEIVRATNG----------FDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL 571 (784)
Q Consensus 503 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l 571 (784)
+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.+++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR---KQQRRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT---TCCSHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc---chhHHHHHHHHHHHHHhC
Confidence 45667777776654 777889999999999999987 7999999998753 233467899999999999
Q ss_pred CCCceeeEEeEEecCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 042086 572 RHRSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNV 651 (784)
Q Consensus 572 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 651 (784)
+||||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999998643 588999999999999999999999 999999999999
Q ss_pred eecCCCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 042086 652 LLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSS 731 (784)
Q Consensus 652 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~ 731 (784)
+++.++.+||+|||++..............||+.|+|||.+.+..++.++|||||||++|||++|+.||.........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-- 250 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-- 250 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--
Confidence 999999999999999988765544456678999999999999999999999999999999999999998643221100
Q ss_pred ccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 732 NRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 732 ~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
........+.... .......+.+++.+||+.||++|||++|+++
T Consensus 251 ---~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 ---KRLRDSPPPKLKN----SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHSSCCCCTT----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHhcCCCCCcCc----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000111111111 1122345788999999999999999999986
No 30
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.3e-42 Score=366.21 Aligned_cols=250 Identities=23% Similarity=0.271 Sum_probs=208.6
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +|+.||+|++++.........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57999999999999999999876 79999999987543223345678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999999997643 578899999999999999999999 9999999999999999999999999999875544
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+ ...
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p-~~~- 228 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIRFP-RTL- 228 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC-TTS-
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCC-CCC-
Confidence 4555667899999999999999999999999999999999999999863221 111111222222222 112
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 042086 754 DELISIVEVAFLCLNESPESRP-----PMHTVCQ 782 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RP-----s~~~vl~ 782 (784)
..++.+++.+||+.||++|| +++|+++
T Consensus 229 --s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 229 --SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 23578899999999999999 8999875
No 31
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-41 Score=395.99 Aligned_cols=368 Identities=25% Similarity=0.198 Sum_probs=267.3
Q ss_pred CCeEEEEeCCCcc-------cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEc
Q 042086 60 KRVISINLSTVGL-------KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDL 132 (784)
Q Consensus 60 ~~v~~l~l~~~~~-------~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 132 (784)
.+++.+++....+ .+++++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 3577777777543 346778888888888888888888888888888888888888877888888888888888
Q ss_pred cCCccCCCCCcCccCCCcCcEEeecCCCccc-ccCCccccccccceeeccccccCCCccccccCccCCc----eeecccc
Q 042086 133 SENQLSGSIPPTLGNLSNLAVLHLYGNSLSG-SIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLV----VLHLFEN 207 (784)
Q Consensus 133 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~n 207 (784)
++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++..|..++.+.+|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 8888887776778888888888888888875 4677888888888888888887765554443333222 2222222
Q ss_pred ccCCccch------------------------------------------------------------------------
Q 042086 208 SLFGSIPS------------------------------------------------------------------------ 215 (784)
Q Consensus 208 ~l~~~~~~------------------------------------------------------------------------ 215 (784)
.+++..+.
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence 22211111
Q ss_pred -------------------------------------------------------------------------hhhcccc
Q 042086 216 -------------------------------------------------------------------------ILGNLKM 222 (784)
Q Consensus 216 -------------------------------------------------------------------------~l~~l~~ 222 (784)
.+..+++
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred ccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCC
Confidence 1122334
Q ss_pred cceeccCCCccccc--cCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCC-ccccCCCcccee
Q 042086 223 LLHLGLSTNHLSGV--IPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLP-RALGSLTELEYL 299 (784)
Q Consensus 223 L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L 299 (784)
|++|++++|++++. .+..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++.+..| ..+..+++|++|
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI--IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE--EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc--cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 44455555555433 2445555666666666666654 455667777888888888888877766 577888888888
Q ss_pred ecccCccCCCCcccccccccceEEecccccccC-CCchhhhcccccCeeccCCccccccccccccccccccEEecCCCcc
Q 042086 300 DLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRK-GFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNF 378 (784)
Q Consensus 300 ~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 378 (784)
++++|.+++..|..+.++++|++|++++|++++ .+|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 888888888888888888888888888888887 4677888888888888888888888888888888889999999988
Q ss_pred CCCCcccccCcccceEEEcCCCCCcccCCCC-CCCc-CCCcccccCCCCCCCCC
Q 042086 379 SGLIPSCFEGMHGLSCIDVSYNELRGPIPNS-RIFQ-YDPMEALQGNKGLCGDI 430 (784)
Q Consensus 379 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~-~~~~~~~~~n~~~c~~~ 430 (784)
++.+|..+..+++|+.|++++|+++. +|.. ..+. ......+.+|++.|+-+
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 88888888888889999999988884 5553 1121 23445678888887643
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=366.47 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=198.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 578999999999999999999874 7999999998764322 2356789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999999997643 588899999999999999999999 999999999999999999999999999986553
Q ss_pred CC-CcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 673 DS-SNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 673 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
.. .......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+..... .....+.......+..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~ 232 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--------ALYKKIMRGKYDVPKW 232 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCTT
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCCC
Confidence 32 23355679999999999988775 88999999999999999999999743211 1111222222222211
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. ...+.+++.+||+.||++|||++|+++
T Consensus 233 -~---s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 233 -L---SPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -C---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -C---CHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1 234678999999999999999999986
No 33
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3e-42 Score=365.10 Aligned_cols=293 Identities=32% Similarity=0.482 Sum_probs=220.2
Q ss_pred chHHHHHHHHHHHhccCCCccccCCCCCCCCCCCccccccCCCCCCCcc--cceeEEcCCCCeEEEEeCCCcccCCCCcc
Q 042086 2 AGKEAYALLKWKTSLQKHNRSLLSSWTFYPVNNATNVSFYSKIKISPCA--WFGIQCNPAKRVISINLSTVGLKGNLKSL 79 (784)
Q Consensus 2 ~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~~~~~~~~~~~~~~~C~--w~gv~C~~~~~v~~l~l~~~~~~~~l~~l 79 (784)
.++|+.||++||+++. +|. .+++|.. +.|||. |.||+|+... ...++
T Consensus 4 ~~~~~~aL~~~k~~~~-~~~-~l~~W~~---------------~~~~C~~~w~gv~C~~~~--------------~~~~l 52 (313)
T 1ogq_A 4 NPQDKQALLQIKKDLG-NPT-TLSSWLP---------------TTDCCNRTWLGVLCDTDT--------------QTYRV 52 (313)
T ss_dssp CHHHHHHHHHHHHHTT-CCG-GGTTCCT---------------TSCTTTTCSTTEEECCSS--------------SCCCE
T ss_pred CHHHHHHHHHHHHhcC-Ccc-cccCCCC---------------CCCCCcCCCcceEeCCCC--------------CCceE
Confidence 3689999999999995 564 7999963 357998 9999998531 01245
Q ss_pred cEEeCCCCcccc--cCCCCcCCCCCCCEEEccC-CcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEee
Q 042086 80 STLDLSKNKLNG--SIPFSFGNLTNLAIMYLYR-NSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHL 156 (784)
Q Consensus 80 ~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (784)
+.|+|++|++++ .+|..|.++++|++|+|++ |.+++.+|..|+++++|++|+|++|.+++.+|..+..+++|++|+|
T Consensus 53 ~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 132 (313)
T 1ogq_A 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132 (313)
T ss_dssp EEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEEC
T ss_pred EEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeC
Confidence 667788888888 7888888888888888884 8888888888888888888888888888888888888888888888
Q ss_pred cCCCcccccCCccccccccceeeccccccCCCccccccCcc-CCceeeccccccCCccchhhhcccccceeccCCCcccc
Q 042086 157 YGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLS-NLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSG 235 (784)
Q Consensus 157 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 235 (784)
++|.+++.+|..|.++++|++|+|++|.+++.+|..+..++ +|++|+|++|++++.+|..+..++ |+.|++++|++++
T Consensus 133 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp CSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC
Confidence 88888888888888888888888888888877787777776 788888888887777777777776 7777777777776
Q ss_pred ccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccccc
Q 042086 236 VIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLG 315 (784)
Q Consensus 236 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~ 315 (784)
..|..|..+++|+.|+|++ |.+++..|. +..+++|++|+|++|.+++.+|..+.
T Consensus 212 ~~~~~~~~l~~L~~L~L~~-------------------------N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~ 265 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAK-------------------------NSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp CCGGGCCTTSCCSEEECCS-------------------------SEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred cCCHHHhcCCCCCEEECCC-------------------------CceeeecCc-ccccCCCCEEECcCCcccCcCChHHh
Confidence 6665555555555555544 444443333 55566677777777777666677777
Q ss_pred ccccceEEecccccccCCCchhhhcccccCeeccCCcc
Q 042086 316 NLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNI 353 (784)
Q Consensus 316 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 353 (784)
.+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 266 ~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 266 QLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 7777777777777777666654 667777777777776
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.7e-42 Score=364.96 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=206.3
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 35799999999999999999997 4899999999875422 222356788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999997653 478899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccccccccccccCCcC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVT-EKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
. ......+||+.|+|||.+.+..++ .++||||+||++|||++|+.||+..... .....+.......+. .
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~p~-~ 236 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--------ELRERVLRGKYRIPF-Y 236 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCT-T
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC-C
Confidence 3 334567899999999999888775 7899999999999999999999743211 111122222222221 1
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. ...+.+++.+||+.||++|||++|+++
T Consensus 237 ~---s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 237 M---STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp S---CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred C---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 235778999999999999999999975
No 35
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.1e-42 Score=367.71 Aligned_cols=254 Identities=19% Similarity=0.267 Sum_probs=207.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC---CChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM---VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.+.|++.+.||+|+||.||+|+.. +|+.||+|.+........ ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999976 699999999876433221 2357899999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC----ceEEeccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY----EARVSDFG 665 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfG 665 (784)
++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 99999999999999997543 588999999999999999999999 999999999999998877 79999999
Q ss_pred cccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 666 IAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 666 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
++..+... .......||+.|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.....
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~ 235 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITAVSY 235 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcCC
Confidence 99876543 233556799999999999998999999999999999999999999963221 111111222221
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+..........+.+++.+||..||++|||+.|+++
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111101112345789999999999999999999986
No 36
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=404.60 Aligned_cols=374 Identities=26% Similarity=0.261 Sum_probs=200.0
Q ss_pred cccceeEEcCCCCeEEEEeCCCcc-------cCCCCcccEEeCCCCcccccC-CCCcCCCCCCCEEEccCCcccccCCCC
Q 042086 49 CAWFGIQCNPAKRVISINLSTVGL-------KGNLKSLSTLDLSKNKLNGSI-PFSFGNLTNLAIMYLYRNSLSASIPPV 120 (784)
Q Consensus 49 C~w~gv~C~~~~~v~~l~l~~~~~-------~~~l~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~ 120 (784)
|.|..|.+ -..+++.++++...+ .+++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|+.
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 55666665 334566666665432 235566666666666544444 556666666666666666666666666
Q ss_pred CCCCCCCCEEEccCCccCCCCCcC--ccCCCcCcEEeecCCCcccccC-CccccccccceeeccccccCCCccccccCc-
Q 042086 121 IGNLKFLYHLDLSENQLSGSIPPT--LGNLSNLAVLHLYGNSLSGSIP-SIIGNLKSLFYLHLSSNQLSGSIPISLGNL- 196 (784)
Q Consensus 121 l~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l- 196 (784)
|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 666666666666666666554443 6666666666666666665443 356666666666666666554433332221
Q ss_pred -------------------------cC------Cceeecccc--------------------------------------
Q 042086 197 -------------------------SN------LVVLHLFEN-------------------------------------- 207 (784)
Q Consensus 197 -------------------------~~------L~~L~L~~n-------------------------------------- 207 (784)
++ |+.|++++|
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 11 444444444
Q ss_pred ------------------------ccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcc
Q 042086 208 ------------------------SLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIP 263 (784)
Q Consensus 208 ------------------------~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 263 (784)
.+.+..+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|+++ ...+
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~ 331 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG-ELYS 331 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCS-CCCS
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCC-ccCH
Confidence 333333334444445555555555555444445555555555555555544 2223
Q ss_pred cccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCC------------------c--------------
Q 042086 264 IEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSI------------------P-------------- 311 (784)
Q Consensus 264 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~------------------~-------------- 311 (784)
..+..+++|+.|++++|.+.+..+..|..+++|+.|+|++|.+++.. |
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N 411 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSEN 411 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSC
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccC
Confidence 44555555555555555555444444555555555555555444210 0
Q ss_pred --------ccccccccceEEecccccccCCC------------------------------chhhhcccccCeeccCCcc
Q 042086 312 --------ETLGNLLKLHYLNLSNNQFRKGF------------------------------PVELEKLIQLSELDLSLNI 353 (784)
Q Consensus 312 --------~~l~~l~~L~~L~ls~N~l~~~~------------------------------~~~~~~l~~L~~L~Ls~N~ 353 (784)
..+.++++|+.|+|++|++++.. +..+..+++|+.|+|++|+
T Consensus 412 ~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 491 (844)
T 3j0a_A 412 RLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNY 491 (844)
T ss_dssp CCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHH
T ss_pred ccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCc
Confidence 00123344444444444443211 1224444555555555555
Q ss_pred ccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcccccCCCCCCC
Q 042086 354 LEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCG 428 (784)
Q Consensus 354 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 428 (784)
+++..|..|..+++|+.|+|++|++++.+|..+. ++|+.|+|++|++++..|. .+.......+.+||+.|.
T Consensus 492 l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 492 LNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFICE 562 (844)
T ss_dssp HTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCCCS
T ss_pred ccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCcccc
Confidence 5555555555555555555555555555544444 4555555555555555553 244556667889999994
No 37
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=360.44 Aligned_cols=253 Identities=25% Similarity=0.461 Sum_probs=204.6
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.. +++.||+|++... .....+.|.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 57899999999999999999976 6899999988543 2334678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.++++... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 87 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp ECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999998643 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcc--------------cccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 674 SSNC--------------TELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 674 ~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
.... ....||+.|+|||.+.+..++.++||||||+++|||++|..|+......... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~ 238 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRG 238 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---Hhhhhhc
Confidence 2211 1457999999999999999999999999999999999999998643221100 0001111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 740 ILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 740 ~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+...+. .. ...+.+++.+||+.||++|||+.++++.|
T Consensus 239 ~~~~~~~~---~~---~~~l~~li~~~l~~dP~~Rps~~~l~~~L 277 (310)
T 3s95_A 239 FLDRYCPP---NC---PPSFFPITVRCCDLDPEKRPSFVKLEHWL 277 (310)
T ss_dssp HHHHTCCT---TC---CTTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccccCCC---CC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11111111 11 12477899999999999999999998764
No 38
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.3e-42 Score=370.85 Aligned_cols=259 Identities=22% Similarity=0.304 Sum_probs=207.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.........+.+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457999999999999999999976 6889999999875444444566789999999887 89999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999997643 588899999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccc-ccccccccccCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSS-NRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~ 750 (784)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||+.......... ........+.......+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 444556677899999999999999999999999999999999999999964322111000 0111112222233322222
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCH------HHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPM------HTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~~vl~ 782 (784)
...++.+++.+||+.||++||++ +|+++
T Consensus 285 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 285 ----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp ----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred ----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 22357889999999999999985 56654
No 39
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-42 Score=365.73 Aligned_cols=251 Identities=21% Similarity=0.258 Sum_probs=206.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|.+... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 468999999999999999999876 6899999998642 22356789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC--CCceEEecccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL--DYEARVSDFGIAKFL 670 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~DfG~a~~~ 670 (784)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.+
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999997543 3588999999999999999999999 9999999999999987 789999999999887
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
... .......||+.|+|||.+.+..++.++|||||||++|||++|..||..... ......+.......+..
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~ 225 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYTFDEE 225 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCCCHH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHcCCCCCChh
Confidence 543 334556799999999999988899999999999999999999999963221 11111222222211111
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......++.+++.+|++.||++|||+.|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11122346889999999999999999999986
No 40
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-41 Score=369.07 Aligned_cols=255 Identities=22% Similarity=0.370 Sum_probs=206.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc--------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT--------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCS 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 584 (784)
.++|++.+.||+|+||.||+|+.. ++..||||+++... .....+++.+|+.+++.+ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 467999999999999999999852 45679999987542 222356799999999999 8999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDGA-------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNV 651 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 651 (784)
+.+..++||||+++|+|.+++..... ...+++..+..++.||++||+|||++ +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999976432 23578999999999999999999999 999999999999
Q ss_pred eecCCCceEEeccccccccCCCCC--cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccc
Q 042086 652 LLCLDYEARVSDFGIAKFLKPDSS--NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISS 728 (784)
Q Consensus 652 ll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~ 728 (784)
+++.++.+||+|||+++.+..... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-- 312 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 312 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 999999999999999987654332 2234467889999999999999999999999999999999 99998743211
Q ss_pred cccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 729 SSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 729 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.....+........+... ..++.+++.+||+.||++|||+.|+++.|
T Consensus 313 ------~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 313 ------ELFKLLKEGHRMDKPANC---TNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp ------GHHHHHHTTCCCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ------HHHHHHhcCCCCCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111111111111111222 23588899999999999999999999864
No 41
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-41 Score=361.35 Aligned_cols=248 Identities=21% Similarity=0.290 Sum_probs=203.8
Q ss_pred cCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999997 478999999986532222334567999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+ +|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred ECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999 679999887543 588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
......+||+.|+|||.+.+..+ ++++|||||||++|||++|+.||+..... .....+.......+ ...
T Consensus 162 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~~~p-~~~ 231 (336)
T 3h4j_B 162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--------NLFKKVNSCVYVMP-DFL 231 (336)
T ss_dssp -BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--------TCBCCCCSSCCCCC-TTS
T ss_pred -cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHcCCCCCc-ccC
Confidence 23345679999999999988776 67999999999999999999999742211 11111111111111 222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+||+.||++|||++|+++
T Consensus 232 ---s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 232 ---SPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 235778999999999999999999975
No 42
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=369.13 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=202.9
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 590 (784)
..++|++.+.||+|+||.||+|+.+ +++.||||++.+.........+.+.+|..+++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999876 6899999998754222333466788999999988 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 101 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999997643 588899999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 246 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPTW 246 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCCC
Confidence 5444555667899999999999988899999999999999999999999964321 11122222233322221
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCH------HHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPM------HTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~~vl~ 782 (784)
. ...+.+++.+|++.||++||++ +|+++
T Consensus 247 -~---~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 247 -L---HEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -S---CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -C---CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2 2357789999999999999998 67764
No 43
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.5e-41 Score=353.41 Aligned_cols=274 Identities=31% Similarity=0.519 Sum_probs=222.3
Q ss_pred ccccHHHHHHHhcCCCCc------eeEecccceEEEEEEEcCCCEEEEEEcCCCCCC-CCCChhhHHHHHHHHhccCCCc
Q 042086 503 GKILYEEIVRATNGFDVK------YCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPC-EMVPQPEFVNEIKTLTELRHRS 575 (784)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~n 575 (784)
..+.+.++..+++.|... +.||+|+||.||+|.. +++.||||++...... .....+.+.+|+.+++.++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 456788999999998877 8999999999999987 5889999998764322 2234567999999999999999
Q ss_pred eeeEEeEEecCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC
Q 042086 576 IVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655 (784)
Q Consensus 576 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 655 (784)
|+++++++.+.+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997554445689999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc---
Q 042086 656 DYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS--- 730 (784)
Q Consensus 656 ~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~--- 730 (784)
++.+||+|||++......... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||+.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 234578999999998865 47899999999999999999999997533211000
Q ss_pred ---cccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 731 ---SNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 731 ---~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
........+.+++.+. .........+.+++.+||+.||++|||+++|++.|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L 301 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMN---DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCS---CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred HHhhhhhhhhhhhcccccc---ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 0011112233333332 23456677899999999999999999999999864
No 44
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-41 Score=352.74 Aligned_cols=251 Identities=25% Similarity=0.428 Sum_probs=206.7
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|+..+++.||+|++... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG----AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT----SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc----ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 3578999999999999999999988999999999763 234578999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999997643 3588999999999999999999999 9999999999999999999999999999876432
Q ss_pred C-CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 674 S-SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 674 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+...... ....+........+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPRL 231 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCCCCCCTT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhcCccCCCCCc
Confidence 2 11233456788999999998999999999999999999999 999987432211 1111111111111111
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
. ...+.+++.+||+.||++|||++++++.|
T Consensus 232 ~---~~~~~~li~~~l~~~p~~Rps~~~ll~~l 261 (269)
T 4hcu_A 232 A---STHVYQIMNHCWRERPEDRPAFSRLLRQL 261 (269)
T ss_dssp S---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred C---CHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 2 23578899999999999999999999864
No 45
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=375.73 Aligned_cols=255 Identities=17% Similarity=0.229 Sum_probs=207.4
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..++|++.+.||+|+||+||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 4567999999999999999999865 789999999876422 12234678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec---CCCceEEecccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAK 668 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfG~a~ 668 (784)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||++.
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999997654 488899999999999999999999 999999999999998 45789999999998
Q ss_pred ccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 669 FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 669 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
.............||+.|+|||++.+..++.++||||+||++|+|++|..||...... .....+.......+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~ 233 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--------RLYQQIKAGAYDFP 233 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTCCCCC
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhCCCCCC
Confidence 8766555556678999999999999999999999999999999999999998632211 11111111111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111122346789999999999999999999986
No 46
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.3e-41 Score=350.75 Aligned_cols=251 Identities=25% Similarity=0.449 Sum_probs=206.8
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|+.+++..||+|++... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG----SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT----TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC----CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 4679999999999999999999998889999998763 224578999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++++|.+++...+ ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999997643 2588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 674 SSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 674 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||+...... ....+........+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 229 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--------VVLKVSQGHRLYRPHL 229 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------HHHHHHTTCCCCCCTT
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--------HHHHHHcCCCCCCCCc
Confidence 221 233456778999999999899999999999999999999 999987433211 0111111111111122
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+ ..+.+++..||+.||++|||++++++.|
T Consensus 230 ~~---~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (268)
T 3sxs_A 230 AS---DTIYQIMYSCWHELPEKRPTFQQLLSSI 259 (268)
T ss_dssp SC---HHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred Ch---HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 22 3578899999999999999999999864
No 47
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.1e-42 Score=359.86 Aligned_cols=256 Identities=23% Similarity=0.340 Sum_probs=201.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|.+...........+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357999999999999999999875 7899999998654333333456799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999997653 588899999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC-CC
Q 042086 673 DSS-NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP-PQ 750 (784)
Q Consensus 673 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~ 750 (784)
... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||+....... ....+....+.. ..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--------~~~~~~~~~~~~~~~ 235 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--------AIKHIQDSVPNVTTD 235 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH--------HHHHHSSCCCCHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--------HHHHhhccCCCcchh
Confidence 322 23446799999999999999999999999999999999999999974322110 000111111100 00
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHh
Q 042086 751 NVQDELISIVEVAFLCLNESPESRP-PMHTVCQL 783 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RP-s~~~vl~~ 783 (784)
...+....+.+++.+|++.||++|| +++++.+.
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~ 269 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDD 269 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHH
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHH
Confidence 0111234688899999999999999 78777654
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.3e-41 Score=357.25 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=202.5
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||+||+|+..+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 467999999999999999999998899999999875422 2223467899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99985 8888887543 3588899999999999999999999 9999999999999999999999999999987655
Q ss_pred CCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc--------c--ccccccc---c
Q 042086 674 SSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS--------S--NRNISLN---E 739 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~--------~--~~~~~~~---~ 739 (784)
........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.......... . ....... .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 555566688999999999876 568999999999999999999999996433211000 0 0000000 0
Q ss_pred ccCCCCCCCCCC-----CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 740 ILDPRLPTPPQN-----VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 740 ~~d~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+......... .+....++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000000000 0111236789999999999999999999986
No 49
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=360.72 Aligned_cols=254 Identities=19% Similarity=0.291 Sum_probs=206.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC---CChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM---VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.+.|++.+.||+|+||.||+|+.. +|+.||+|.+........ ...+.+.+|+.+++.++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999976 689999999876433221 2357899999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC----ceEEeccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY----EARVSDFG 665 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfG 665 (784)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999754 3588999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 666 IAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 666 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
+++.+.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANVSAVNY 234 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHHTCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHhcCC
Confidence 998775432 3345679999999999998999999999999999999999999986322110 0011111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+..........+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1110000112335788999999999999999999986
No 50
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=360.94 Aligned_cols=252 Identities=25% Similarity=0.459 Sum_probs=202.3
Q ss_pred hcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.++|++.+.||+|+||.||+|+.. .+..||||++.... .....+.|.+|+.+++.++||||+++++++.+.+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 357889999999999999999875 35569999987532 222356799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999997543 3689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042086 670 LKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-R 744 (784)
Q Consensus 670 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~ 744 (784)
+...... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....+... +
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~~~~~~~~~~ 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--------VISSVEEGYR 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--------HHHHHHTTCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHHcCCC
Confidence 7543222 223345778999999998999999999999999999999 999986432211 01111111 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+.+ .. ....+.+++..||+.||++|||+.+|++.|
T Consensus 273 ~~~~-~~---~~~~l~~li~~~l~~dp~~Rps~~eil~~L 308 (325)
T 3kul_A 273 LPAP-MG---CPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308 (325)
T ss_dssp CCCC-TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC-CC---cCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1111 12 223578899999999999999999999864
No 51
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.6e-42 Score=368.82 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=206.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCC--CCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLW--PCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 590 (784)
.+.|++.+.||+|+||+||+|+.. +++.||||++.... .......+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357999999999999999999875 79999999985421 112234678999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc---eEEecccc
Q 042086 591 LVYEYLERGSLATILSNDG-AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSDFGI 666 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfG~ 666 (784)
+||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998875432 223578899999999999999999999 9999999999999987654 99999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
+..............||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCCCC
Confidence 98876554445567899999999999999999999999999999999999999964211 011111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+.........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111000112346889999999999999999999986
No 52
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=376.12 Aligned_cols=331 Identities=22% Similarity=0.192 Sum_probs=262.6
Q ss_pred CCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEe
Q 042086 76 LKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLH 155 (784)
Q Consensus 76 l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 155 (784)
.+++++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35789999999999998899999999999999999999988899999999999999999999977677789999999999
Q ss_pred ecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcccc
Q 042086 156 LYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSG 235 (784)
Q Consensus 156 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 235 (784)
|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|.+++
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999998888899999999999999999998888889999999999999999988877888889999999999998887
Q ss_pred ccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccccc
Q 042086 236 VIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLG 315 (784)
Q Consensus 236 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~ 315 (784)
..+..|..+++|+.|++++|... +.+|.......+|+.|++++|.++...+..+.
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~-------------------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 245 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYL-------------------------DTMTPNCLYGLNLTSLSITHCNLTAVPYLAVR 245 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTC-------------------------CEECTTTTTTCCCSEEEEESSCCCSCCHHHHT
T ss_pred eChhhcccCcccceeeCCCCccc-------------------------cccCcccccCccccEEECcCCcccccCHHHhc
Confidence 76666666666666666665543 33333333444667777777777654445667
Q ss_pred ccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEE
Q 042086 316 NLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCI 395 (784)
Q Consensus 316 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l 395 (784)
.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 325 (477)
T 2id5_A 246 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325 (477)
T ss_dssp TCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEE
T ss_pred CccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEE
Confidence 77777777777777777666677777777777777777777777778888888888888888888777778888888888
Q ss_pred EcCCCCCcccCCCCCCCcCCCcccccCCCCCCCCCC
Q 042086 396 DVSYNELRGPIPNSRIFQYDPMEALQGNKGLCGDIK 431 (784)
Q Consensus 396 ~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 431 (784)
++++|+|.|.++..+.+.......+.++...|..|.
T Consensus 326 ~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 326 ILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp ECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred EccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 888888888776544433333344566777777654
No 53
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-41 Score=362.43 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=207.0
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 592 (784)
++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999976 6899999999765333333455688999999988 899999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999997643 588899999999999999999999 999999999999999999999999999987544
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-cccccccccccCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-SNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 751 (784)
........+||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... .........+.......+. .
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-~ 241 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-S 241 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT-T
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC-C
Confidence 4445566789999999999999999999999999999999999999996432211000 0001111122222222221 1
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCH------HHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPM------HTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~------~~vl~ 782 (784)
....+.+++.+||+.||++||++ +|+++
T Consensus 242 ---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 242 ---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred ---CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 22357889999999999999995 66654
No 54
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=355.34 Aligned_cols=263 Identities=20% Similarity=0.293 Sum_probs=210.5
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC--ceEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR--NSFL 591 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 591 (784)
++|++.+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 57999999999999999999976 58999999987532 2234678899999999999999999999997655 7799
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee----cCCCceEEeccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL----CLDYEARVSDFGIA 667 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfG~a 667 (784)
||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999998755444589999999999999999999999 99999999999999 77888999999999
Q ss_pred cccCCCCCcccccccccccccccccc--------cCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc----------
Q 042086 668 KFLKPDSSNCTELVGTFGYIAPELVY--------TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS---------- 729 (784)
Q Consensus 668 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~---------- 729 (784)
+...... ......||+.|+|||.+. +..++.++|||||||++|||++|+.||.........
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 8775443 334567999999999986 567899999999999999999999998632221100
Q ss_pred cc-c------cccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 730 SS-N------RNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 730 ~~-~------~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
.+ . ........+.+..+............+.+++.+||+.||++|||++|+++.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 00 0 000000001122333334456667789999999999999999999999874
No 55
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-41 Score=364.22 Aligned_cols=253 Identities=23% Similarity=0.293 Sum_probs=207.2
Q ss_pred HHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCce
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 589 (784)
...++|++.+.||+|+||.||+|+.+ +|+.||+|+++..........+.+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999976 6899999998764222233466788999999887 999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 99999999999999997643 588899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
...........+||+.|+|||.+.+..++.++|+|||||++|||++|+.||...... .....+.......+
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p- 238 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDNPFYP- 238 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCC-
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCCCCCC-
Confidence 544444456678999999999999999999999999999999999999999632211 11111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHH-HHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMH-TVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~-~vl~ 782 (784)
... ..++.+++.+||+.||++||++. ++.+
T Consensus 239 ~~~---s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 RWL---EKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ccc---CHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 112 23578899999999999999997 6653
No 56
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-41 Score=355.62 Aligned_cols=247 Identities=25% Similarity=0.381 Sum_probs=206.6
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57999999999999999999876 79999999987543223345677889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp CCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 9999999999998653 578899999999999999999999 999999999999999999999999999987543
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.....+||+.|+|||.+.+..++.++|+|||||++|||++|+.||..... ......+.......+.. .
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~p~~-~- 226 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------MKTYEKILNAELRFPPF-F- 226 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHCCCCCCTT-S-
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCC-C-
Confidence 23456799999999999999999999999999999999999999963221 11112222222222221 2
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 042086 754 DELISIVEVAFLCLNESPESRP-----PMHTVCQ 782 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RP-----s~~~vl~ 782 (784)
..++.+++.+|++.||++|| +++|+++
T Consensus 227 --~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 --NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 23577899999999999999 8888875
No 57
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.1e-41 Score=364.69 Aligned_cols=254 Identities=19% Similarity=0.268 Sum_probs=206.3
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 3467999999999999999999876 689999999875422 12234678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC---ceEEecccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY---EARVSDFGIAK 668 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfG~a~ 668 (784)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999997543 578899999999999999999999 999999999999998654 59999999998
Q ss_pred ccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 669 FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 669 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+
T Consensus 180 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~~~~ 250 (362)
T 2bdw_A 180 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGAYDYP 250 (362)
T ss_dssp CCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC
T ss_pred EecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCC
Confidence 76533 3334568999999999999989999999999999999999999998632211 01111111111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........++.+++.+||+.||++|||+.++++
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1112223346889999999999999999999875
No 58
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=348.54 Aligned_cols=252 Identities=25% Similarity=0.385 Sum_probs=185.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||+|.+...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 357999999999999999999874 7999999998653322233457899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999997643 3688999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.........||+.|+|||.+.+..++.++||||||+++|||++|+.||+..... .....+.......+ ..
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~-~~- 234 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--------NTLNKVVLADYEMP-SF- 234 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCC-TT-
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--------HHHHHHhhcccCCc-cc-
Confidence 444444567899999999999888999999999999999999999998743211 11111111111111 11
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...++.+++.+||+.||++|||++++++
T Consensus 235 --~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 --LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 2235788999999999999999999986
No 59
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.9e-40 Score=380.71 Aligned_cols=326 Identities=25% Similarity=0.222 Sum_probs=176.9
Q ss_pred cccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeec
Q 042086 78 SLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLY 157 (784)
Q Consensus 78 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 157 (784)
++++|+|++|+|++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 46666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccc--eeccCCCcccc
Q 042086 158 GNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLL--HLGLSTNHLSG 235 (784)
Q Consensus 158 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~--~L~L~~n~l~~ 235 (784)
+|.+++..+..+.++++|++|+|++|.+++..+..+..+++|++|++++|.+++..+..|+.+++|+ .|++++|++++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 6666655555666666666666666666653333333466666666666666655566666666665 55666665555
Q ss_pred ccCCCCcCC---------------------------------------------------CCcceEEecCCCCCCCCccc
Q 042086 236 VIPLSIGNL---------------------------------------------------NNLIGLYLYDNQLSVGEIPI 264 (784)
Q Consensus 236 ~~~~~l~~l---------------------------------------------------~~L~~L~L~~n~l~~~~~~~ 264 (784)
..|..+... .+|+.|++++|.++ ...+.
T Consensus 194 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~-~~~~~ 272 (606)
T 3t6q_A 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF-NISSN 272 (606)
T ss_dssp ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCS-SCCTT
T ss_pred cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccC-ccCHH
Confidence 444333211 03444444444443 11122
Q ss_pred ccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCch-hhhcccc
Q 042086 265 EIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPV-ELEKLIQ 343 (784)
Q Consensus 265 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~ 343 (784)
.+..+++|++|++++|+++ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+.++. .+..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 2444455555555555544 3444444555555555555555444444444555555555555544432322 2444455
Q ss_pred cCeeccCCccccccc--cccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCccc
Q 042086 344 LSELDLSLNILEGKI--PCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGP 405 (784)
Q Consensus 344 L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 405 (784)
|+.|++++|.+.+.. +..+..+++|+.|++++|++.+..|..+..+++|+.|++++|++.+.
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 415 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVK 415 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECC
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCc
Confidence 555555555444433 34444445555555555554444444444455555555555544443
No 60
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-41 Score=369.69 Aligned_cols=252 Identities=23% Similarity=0.410 Sum_probs=204.3
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||||.++... .....++|.+|++++++++||||+++++++.+.+..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 457899999999999999999986 78999999987532 122345788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++..+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999997543 3588899999999999999999999 999999999999999999999999999986543
Q ss_pred CCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCC
Q 042086 673 DSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILD-PRLPTP 748 (784)
Q Consensus 673 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~ 748 (784)
.... .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+.. .+++.+
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--------~~~~~~~~~~~~~ 337 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--------REFVEKGGRLPCP 337 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--------HHHHHTTCCCCCC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCC
Confidence 2111 112345778999999998899999999999999999998 9999874332110 000111 122222
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+ ..+.+++.+||+.||++|||++++++.|
T Consensus 338 -~~~~---~~l~~li~~cl~~dP~~Rps~~~i~~~L 369 (377)
T 3cbl_A 338 -ELCP---DAVFRLMEQCWAYEPGQRPSFSTIYQEL 369 (377)
T ss_dssp -TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -CCCC---HHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 2222 3577899999999999999999999864
No 61
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.3e-41 Score=360.13 Aligned_cols=252 Identities=21% Similarity=0.389 Sum_probs=204.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC-----
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR----- 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 587 (784)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 457999999999999999999987 89999999987532 2334678999999999999999999999986543
Q ss_pred ----------------------------------------------------ceEEEEecccCCCHHHHHhcCCCCCCCC
Q 042086 588 ----------------------------------------------------NSFLVYEYLERGSLATILSNDGAIEEFN 615 (784)
Q Consensus 588 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~ 615 (784)
..++||||+++|+|.++++........+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 2789999999999999998877666778
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCCCC------------cccccccc
Q 042086 616 WTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS------------NCTELVGT 683 (784)
Q Consensus 616 ~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~gt 683 (784)
+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 888999999999999999999 999999999999999999999999999988765421 22345799
Q ss_pred cccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHH
Q 042086 684 FGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVA 763 (784)
Q Consensus 684 ~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li 763 (784)
+.|+|||.+.+..++.++|||||||++|||++|..|+...... .........+ .........+.+++
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~li 306 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI----------ITDVRNLKFP---LLFTQKYPQEHMMV 306 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH----------HHHHHTTCCC---HHHHHHCHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH----------HHHhhccCCC---cccccCChhHHHHH
Confidence 9999999999999999999999999999999998875321110 0111111111 11223345678999
Q ss_pred HhcccCCCCCCCCHHHHHHh
Q 042086 764 FLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 764 ~~cl~~dP~~RPs~~~vl~~ 783 (784)
.+||+.||++|||++|+++.
T Consensus 307 ~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHHS
T ss_pred HHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999873
No 62
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.7e-41 Score=361.01 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=208.1
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 590 (784)
..++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+..|..++..+ +||+|+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3568999999999999999999986 5889999998764322334567789999999988 8999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999997643 488899999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~- 242 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPK- 242 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT-
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCC-
Confidence 4444455667899999999999999999999999999999999999999963221 1111222222222221
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPP-----MHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~~vl~ 782 (784)
. ...++.+++.+||+.||++||+ ++++++
T Consensus 243 ~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 S---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp T---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred C---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 2235788999999999999995 577764
No 63
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.7e-41 Score=366.66 Aligned_cols=252 Identities=23% Similarity=0.470 Sum_probs=193.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.++|++.+.||+|+||.||+|+.. ++..||||+++... .....++|.+|+.++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 357999999999999999999865 57789999987532 223456799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.++++..+ ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999997653 3689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042086 670 LKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-R 744 (784)
Q Consensus 670 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~ 744 (784)
....... .....+++.|+|||.+.+..++.++|||||||++||+++ |+.||....... ....+... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------~~~~i~~~~~ 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKAVDEGYR 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------HHHHHHTTEE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC
Confidence 6543221 122345778999999999999999999999999999998 999986432110 00011111 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+.+ . .....+.+++.+||+.||++||++.+|++.|
T Consensus 269 ~~~~-~---~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L 304 (373)
T 2qol_A 269 LPPP-M---DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304 (373)
T ss_dssp CCCC-T---TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC-c---cccHHHHHHHHHHhCcChhhCcCHHHHHHHH
Confidence 1111 1 1223588899999999999999999999864
No 64
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.9e-41 Score=359.27 Aligned_cols=247 Identities=22% Similarity=0.269 Sum_probs=206.9
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57999999999999999999976 79999999986543323345678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 9999999999997643 478899999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+. ..
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~-~~- 261 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKVRFPS-HF- 261 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT-TC-
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcCCCCCCC-CC-
Confidence 3456899999999999999999999999999999999999999963221 1111122222222221 12
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 042086 754 DELISIVEVAFLCLNESPESRPP-----MHTVCQ 782 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs-----~~~vl~ 782 (784)
...+.+++.+||+.||++||+ ++|+++
T Consensus 262 --~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 --SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 235788999999999999998 888875
No 65
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.5e-40 Score=346.73 Aligned_cols=261 Identities=23% Similarity=0.322 Sum_probs=200.5
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEEe
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYE 594 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 594 (784)
++|++.+.||+|+||+||+|+..+|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 47899999999999999999998899999999875432 22335678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCCC
Q 042086 595 YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDS 674 (784)
Q Consensus 595 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 674 (784)
|+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9986 9999987543 3588899999999999999999999 99999999999999999999999999998765444
Q ss_pred CcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCcccccccc------------cccccccccccc
Q 042086 675 SNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS------------SSNRNISLNEIL 741 (784)
Q Consensus 675 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~------------~~~~~~~~~~~~ 741 (784)
.......||+.|+|||.+.+. .++.++|||||||++|||++|+.||......... ............
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 444556789999999999764 5899999999999999999999999643221000 000000000001
Q ss_pred CCCCCCCC-----CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 742 DPRLPTPP-----QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 742 d~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
++...... ........++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111000 000112345789999999999999999999986
No 66
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5e-41 Score=351.10 Aligned_cols=251 Identities=23% Similarity=0.427 Sum_probs=203.7
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|+..+++.||+|++... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG----SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT----SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC----CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 4579999999999999999999998999999999763 224578999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999997632 3588999999999999999999999 9999999999999999999999999999876432
Q ss_pred CC-cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 674 SS-NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 674 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
.. ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+........+..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 245 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--------TAEHIAQGLRLYRPHL 245 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------HHHHHHTTCCCCCCTT
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--------HHHHHhcccCCCCCCc
Confidence 11 1233456788999999998899999999999999999998 999987433211 1111111111111122
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
. ...+.+++.+||+.||++|||++++++.|
T Consensus 246 ~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 246 A---SEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp C---CHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred C---CHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 2 23578899999999999999999999864
No 67
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=353.51 Aligned_cols=252 Identities=22% Similarity=0.309 Sum_probs=197.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCC-----------------------CCChhhHHHHHHHHh
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCE-----------------------MVPQPEFVNEIKTLT 569 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~ 569 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367999999999999999999875 68999999986543211 112467899999999
Q ss_pred ccCCCceeeEEeEEec--CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCC
Q 042086 570 ELRHRSIVKFYGFCSH--PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDIS 647 (784)
Q Consensus 570 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 647 (784)
+++||||+++++++.+ .+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 5678999999999999876532 3688999999999999999999999 99999999
Q ss_pred CCCeeecCCCceEEeccccccccCCCCCcccccccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCCccc
Q 042086 648 SKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK---VTEKCDVYSFGVLALEVIKGDHPRDFIS 724 (784)
Q Consensus 648 ~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslGv~l~elltg~~p~~~~~ 724 (784)
|+||+++.++.+||+|||+++.+...........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999988765544455678999999999998665 4778999999999999999999986432
Q ss_pred cccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 725 SISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 725 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.... ...+.......+. .......+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~--------~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IMCL--------HSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHH--------HHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHH--------HHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1100 0011111111110 0112235788999999999999999999975
No 68
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-40 Score=386.41 Aligned_cols=338 Identities=22% Similarity=0.312 Sum_probs=302.4
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEccCC---------------------------------------------
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRN--------------------------------------------- 111 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n--------------------------------------------- 111 (784)
.+++.|+|++|+++|.+|.+|++|++|++|+|++|
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 47899999999999999999999999999999988
Q ss_pred ---------------------------------cccccCCCCCCCCCCCCEEEccCCccCCC-----------------C
Q 042086 112 ---------------------------------SLSASIPPVIGNLKFLYHLDLSENQLSGS-----------------I 141 (784)
Q Consensus 112 ---------------------------------~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-----------------~ 141 (784)
++++ +|..|+++++|++|+|++|.+++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 4445 889999999999999999999986 9
Q ss_pred CcCcc--CCCcCcEEeecCCCcccccCCccccccccceeeccccc-cCC-CccccccCc------cCCceeeccccccCC
Q 042086 142 PPTLG--NLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQ-LSG-SIPISLGNL------SNLVVLHLFENSLFG 211 (784)
Q Consensus 142 p~~l~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~l~~ 211 (784)
|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~- 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK- 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-
Confidence 99999 99999999999999999999999999999999999998 998 899988876 99999999999999
Q ss_pred ccch--hhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccc-cceEeccCccccCCCCc
Q 042086 212 SIPS--ILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSS-LNYLVLNGNQLYGNLPR 288 (784)
Q Consensus 212 ~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~-L~~L~l~~n~l~~~~~~ 288 (784)
.+|. .++++++|+.|++++|+++|.+| .|..+++|+.|++++|+++ .+|..+..+++ |++|++++|+++ .+|.
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~--~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT--EIPANFCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE--ECCTTSEEECTTCCEEECCSSCCS-SCCS
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc--cccHhhhhhcccCcEEEccCCcCc-ccch
Confidence 7887 89999999999999999999999 9999999999999999998 88989999999 999999999999 7888
Q ss_pred cccCCC--ccceeecccCccCCCCccccc-------ccccceEEecccccccCCCchhhhcccccCeeccCCcccccccc
Q 042086 289 ALGSLT--ELEYLDLSTNKLGNSIPETLG-------NLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIP 359 (784)
Q Consensus 289 ~l~~l~--~L~~L~Ls~n~l~~~~~~~l~-------~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 359 (784)
.+..++ +|+.|++++|.+++.+|..+. .+++|++|+|++|+++...+..+..+++|+.|+|++|+++ .+|
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~ 473 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIP 473 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCC
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcC
Confidence 887765 999999999999999999998 8889999999999999755555667999999999999999 666
Q ss_pred ccccc-c-------ccccEEecCCCccCCCCccccc--CcccceEEEcCCCCCcccCCCC-CCCcCCCcccccCC
Q 042086 360 CEICN-M-------ESLEKLNLSHNNFSGLIPSCFE--GMHGLSCIDVSYNELRGPIPNS-RIFQYDPMEALQGN 423 (784)
Q Consensus 360 ~~~~~-l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n 423 (784)
..+.. . ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|.. ..........+.+|
T Consensus 474 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 474 KNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp SSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred HHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 55443 2 29999999999999 6777776 99999999999999998 7753 22333334445443
No 69
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-41 Score=363.41 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=205.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.+.|++.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 467999999999999999999876 78999999986532 12345789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC--CCceEEecccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL--DYEARVSDFGIAKFL 670 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~DfG~a~~~ 670 (784)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++.+
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999997543 3588999999999999999999999 9999999999999974 467999999999887
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..........
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~--------~~~i~~~~~~~~~~ 272 (387)
T 1kob_A 202 NPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET--------LQNVKRCDWEFDED 272 (387)
T ss_dssp CTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--------HHHHHHCCCCCCSS
T ss_pred CCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH--------HHHHHhCCCCCCcc
Confidence 5432 33455799999999999999999999999999999999999999974322110 01111111111111
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......++.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 11122346789999999999999999999986
No 70
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=364.42 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=205.3
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57999999999999999999876 68999999986543333445678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 95 e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999998643 588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYT---MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... .......+.......+ .
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~p-~ 241 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-----SKEIVHTFETTVVTYP-S 241 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-----HHHHHHHHHHCCCCCC-T
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhhcccCCC-C
Confidence 33456789999999999974 458899999999999999999999996322111 0000111111111111 1
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCC-HHHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPP-MHTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs-~~~vl~ 782 (784)
. ....+.+++.+||+.||++||+ ++++.+
T Consensus 242 ~---~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 242 A---WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp T---SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred c---CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2 2235788999999999999998 777754
No 71
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=9.3e-42 Score=372.94 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=207.0
Q ss_pred HHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 510 IVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 510 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
+....++|++.+.||+|+||.||+|+.+ +++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+++.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3345678999999999999999999976 689999999865332233345678999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999999753 478899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-cccccccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 042086 669 FLKPDSS-NCTELVGTFGYIAPELVYTMK----VTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDP 743 (784)
Q Consensus 669 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~ 743 (784)
.+..... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .....++..
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~ 288 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMNH 288 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hHHHHHHhc
Confidence 7654332 234568999999999997655 788999999999999999999999632211 111122211
Q ss_pred ----CCCCCCCCCHHHHHHHHHHHHhcccCCCCC--CCCHHHHHH
Q 042086 744 ----RLPTPPQNVQDELISIVEVAFLCLNESPES--RPPMHTVCQ 782 (784)
Q Consensus 744 ----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~~vl~ 782 (784)
..+... ....++.+++.+|++.+|++ ||+++||++
T Consensus 289 ~~~~~~p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 289 KNSLTFPDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHCCCCTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cccccCCCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111111 12235778999999999998 999999986
No 72
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7e-41 Score=353.31 Aligned_cols=253 Identities=25% Similarity=0.413 Sum_probs=196.9
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhc--cCCCceeeEEeEEec----CC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTE--LRHRSIVKFYGFCSH----PR 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~ 587 (784)
.++|++.+.||+|+||+||+|+. +++.||||++... ..+.+..|.+++.. ++||||+++++++.+ ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46799999999999999999988 5899999998642 34566777777766 799999999998644 34
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEeCCCCCCeeecCCCce
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH--------HDCFPPIVHRDISSKNVLLCLDYEA 659 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~ 659 (784)
..++||||+++|+|.++++.. .+++..+.+++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 578999999999999999643 5889999999999999999999 76 99999999999999999999
Q ss_pred EEeccccccccCCCCCc----ccccccccccccccccccC------CcCcchhHHHHHHHHHHHHhC----------CCC
Q 042086 660 RVSDFGIAKFLKPDSSN----CTELVGTFGYIAPELVYTM------KVTEKCDVYSFGVLALEVIKG----------DHP 719 (784)
Q Consensus 660 kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslGv~l~elltg----------~~p 719 (784)
||+|||+++........ .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99999999876543322 2334799999999999876 456799999999999999999 666
Q ss_pred CCccccccccccccccccccc--cCCCCCCCCC--CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 720 RDFISSISSSSSNRNISLNEI--LDPRLPTPPQ--NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
|......... ....... .+...+..+. ........+.+++.+||+.||++|||+++|++.|
T Consensus 233 f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 297 (301)
T 3q4u_A 233 FYDVVPNDPS----FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297 (301)
T ss_dssp TTTTSCSSCC----HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred ccccCCCCcc----hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence 6432111100 0000010 1111111111 1234566899999999999999999999999875
No 73
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.7e-41 Score=358.75 Aligned_cols=262 Identities=24% Similarity=0.344 Sum_probs=202.1
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC----ce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR----NS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 589 (784)
.++|++.+.||+|+||+||+|+.. ++.||||++... ......+..|+.++++++||||+++++++.+.. ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 467999999999999999999886 799999998653 223445677899999999999999999997754 36
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------CCCeEEeCCCCCCeeecCCCceEEe
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC-------FPPIVHRDISSKNVLLCLDYEARVS 662 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------~~~ivH~Dlk~~Nill~~~~~~kl~ 662 (784)
++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999764 4889999999999999999999861 2389999999999999999999999
Q ss_pred ccccccccCCCCC--ccccccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-----
Q 042086 663 DFGIAKFLKPDSS--NCTELVGTFGYIAPELVYT-----MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS----- 730 (784)
Q Consensus 663 DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~----- 730 (784)
|||+++.+..... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||..........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654332 2334679999999999986 356678999999999999999999987432211000
Q ss_pred ---cccccccccccCCCCCCC-CC--CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 731 ---SNRNISLNEILDPRLPTP-PQ--NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 731 ---~~~~~~~~~~~d~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.........+........ .. .......++.+++.+||+.||++|||++||++.|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 313 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 000000000111111111 00 1123455689999999999999999999999864
No 74
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-40 Score=354.98 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=195.2
Q ss_pred hcCCCCceeEecccceEEEEEEE----cCCCEEEEEEcCCCCCC-CCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL----TSGEILAVKKFHSLWPC-EMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... .......+.+|+.+++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 45799999999999999999987 47999999999764321 22335568899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 478889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 669 FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 669 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
.............||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 655444444566899999999999999999999999999999999999999974221 111112222222222
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRP-----PMHTVCQ 782 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~~vl~ 782 (784)
.. . ...+.+++.+||+.||++|| ++.|+++
T Consensus 242 ~~-~---~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PY-L---TQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TT-S---CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC-C---CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11 1 23578899999999999999 7778875
No 75
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.2e-40 Score=345.71 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=202.7
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 47999999999999999999976 689999999976432 2233467899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++ ++.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99986 6666665432 3588999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCcccccccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCCcccccccc-----------cccccccccccc
Q 042086 674 SSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-----------SSNRNISLNEIL 741 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-----------~~~~~~~~~~~~ 741 (784)
........||+.|+|||.+.+.. ++.++|||||||++|||++|..|+......... ............
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 55556678899999999998766 799999999999999999998885321110000 000000000000
Q ss_pred CC-------CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 742 DP-------RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 742 d~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+. ...............+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 000000111123346789999999999999999999986
No 76
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.3e-41 Score=362.56 Aligned_cols=247 Identities=22% Similarity=0.267 Sum_probs=195.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHH-HhccCCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKT-LTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.+.........+.+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357999999999999999999976 688999999976544333445567778777 577899999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997643 478889999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
.........+||+.|+|||++.+..++.++|+|||||++|||++|+.||..... ......++......+..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~- 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILNKPLQLKPN- 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------HHHHHHHHHSCCCCCSS-
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhcccCCCCC-
Confidence 444555677899999999999999999999999999999999999999963221 11112222222222221
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMH 778 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~ 778 (784)
. ...+.+++.+||+.||++||++.
T Consensus 262 ~---~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 262 I---TNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp S---CHHHHHHHHHHTCSSGGGSTTTT
T ss_pred C---CHHHHHHHHHHcccCHHhCCCCC
Confidence 2 23577899999999999999974
No 77
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=358.51 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=189.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.+.|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 467999999999999999999986 68899999987532 345788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---CCceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---DYEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfG~a~~ 669 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 127 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999997643 488899999999999999999999 9999999999999975 88999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ......+.........
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~~~~~ 272 (349)
T 2w4o_A 201 VEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEYYFIS 272 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCCCCCT
T ss_pred cCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCCccCC
Confidence 6432 2234567899999999999999999999999999999999999998632211 0011112222211111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111223346889999999999999999999986
No 78
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-41 Score=372.30 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=208.8
Q ss_pred HHHHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 508 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
.++....++|++.+.||+|+||+||+|+.+ +++.||+|++.+.........+.+.+|+.++..++||||+++++++.+.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 344445678999999999999999999977 5889999998653222233455689999999999999999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999997642 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc-ccccccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042086 667 AKFLKPDSSN-CTELVGTFGYIAPELVY-----TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEI 740 (784)
Q Consensus 667 a~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 740 (784)
++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--------~~~~~i 293 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKI 293 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--------HHHHhh
Confidence 9876544332 34468999999999997 567899999999999999999999999642211 111111
Q ss_pred cC----CCCCCCCCCCHHHHHHHHHHHHhcccCCCCC--CCCHHHHHH
Q 042086 741 LD----PRLPTPPQNVQDELISIVEVAFLCLNESPES--RPPMHTVCQ 782 (784)
Q Consensus 741 ~d----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~~vl~ 782 (784)
+. ...+.... .....+.+++.+|+..+|++ ||+++|+++
T Consensus 294 ~~~~~~~~~p~~~~---~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 294 MNHKERFQFPTQVT---DVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HTHHHHCCCCSSCC---CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhccccccCCcccc---cCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11 11111111 12335778999999998888 999999985
No 79
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6e-41 Score=373.59 Aligned_cols=251 Identities=22% Similarity=0.251 Sum_probs=197.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||||++.............+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 7999999998754322333456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH-DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999997643 58889999999999999999998 7 99999999999999999999999999998755
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. .
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~-~ 371 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPR-T 371 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCT-T
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHhCCCCCCc-c
Confidence 5545556678999999999999999999999999999999999999999632211 111111112222221 1
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRP-----PMHTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~~vl~ 782 (784)
. ..++.+++.+||+.||++|| +++|+++
T Consensus 372 ~---~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 L---GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp S---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C---CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 2 23578899999999999999 9999986
No 80
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-41 Score=360.15 Aligned_cols=256 Identities=22% Similarity=0.419 Sum_probs=206.8
Q ss_pred HhcCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
..++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.|.+|+.+++.++||||+++++++.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 4578999999999999999999875 34899999987532 222356799999999999999999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeC
Q 042086 587 RNSFLVYEYLERGSLATILSNDGA---------------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRD 645 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 645 (784)
+..++||||+++|+|.+++..... ...+++..++.++.||++||+|||++ +|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 999999999999999999976421 14689999999999999999999999 999999
Q ss_pred CCCCCeeecCCCceEEeccccccccCCCC--CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCc
Q 042086 646 ISSKNVLLCLDYEARVSDFGIAKFLKPDS--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722 (784)
Q Consensus 646 lk~~Nill~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~ 722 (784)
|||+||+++.++.+||+|||+++...... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999998654322 12234567899999999998899999999999999999999 9999864
Q ss_pred cccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 723 ISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.... .....+.+......+...+ ..+.+++.+||+.||++|||+.++++.|
T Consensus 280 ~~~~--------~~~~~~~~~~~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~~~~~L 330 (343)
T 1luf_A 280 MAHE--------EVIYYVRDGNILACPENCP---LELYNLMRLCWSKLPADRPSFCSIHRIL 330 (343)
T ss_dssp SCHH--------HHHHHHHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CChH--------HHHHHHhCCCcCCCCCCCC---HHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 3211 1111122222222222222 3578899999999999999999999864
No 81
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-40 Score=344.96 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=181.9
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999865 78999999998755444555678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+ +++|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 668888887643 588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||+..... .....+.......+ ...
T Consensus 166 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~-~~~ 235 (275)
T 2eue_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNGVYTLP-KFL 235 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC-TTS
T ss_pred c-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC-ccC
Confidence 2 2345578999999999987765 68999999999999999999999743211 01111111111111 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+|++.||++|||++|+++
T Consensus 236 ---~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 236 ---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 235778999999999999999999975
No 82
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-39 Score=376.85 Aligned_cols=363 Identities=21% Similarity=0.177 Sum_probs=313.7
Q ss_pred CCeEEEEeCCCcc-------cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEc
Q 042086 60 KRVISINLSTVGL-------KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDL 132 (784)
Q Consensus 60 ~~v~~l~l~~~~~-------~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 132 (784)
..++.++++...+ .+.+++|++|+|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 3678888887643 357889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCc--eeeccccccC
Q 042086 133 SENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLV--VLHLFENSLF 210 (784)
Q Consensus 133 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~ 210 (784)
++|++++..|..++.+++|++|+|++|.+++.....+..+++|++|+|++|.+++..|..++.+++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999987788899999999999999999975545556699999999999999988888899999999 8999999998
Q ss_pred Cccchhhhcc-------------------------------------------------c--ccceeccCCCccccccCC
Q 042086 211 GSIPSILGNL-------------------------------------------------K--MLLHLGLSTNHLSGVIPL 239 (784)
Q Consensus 211 ~~~~~~l~~l-------------------------------------------------~--~L~~L~L~~n~l~~~~~~ 239 (784)
+..+..+... . +|+.|++++|.+++..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 7776554321 1 688899999999988888
Q ss_pred CCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcc-cccccc
Q 042086 240 SIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPE-TLGNLL 318 (784)
Q Consensus 240 ~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~-~l~~l~ 318 (784)
.|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|++|++++|.+.+.+|. .+..++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~--~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS--ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS--CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HhccccCCCEEeccCCccC--CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 8999999999999999987 7888899999999999999999988888899999999999999998866654 488899
Q ss_pred cceEEecccccccCCC--chhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCccc-ccCcccceEE
Q 042086 319 KLHYLNLSNNQFRKGF--PVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSC-FEGMHGLSCI 395 (784)
Q Consensus 319 ~L~~L~ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l 395 (784)
+|++|++++|.+++.. +..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|++++..|.. +..+++|+.|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999998765 778899999999999999999888888999999999999999998887654 8889999999
Q ss_pred EcCCCCCcccCCCC-CCCcCCCcccccCCC
Q 042086 396 DVSYNELRGPIPNS-RIFQYDPMEALQGNK 424 (784)
Q Consensus 396 ~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~ 424 (784)
++++|.+.+..|.. ..........+.+|+
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 460 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNH 460 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCB
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCC
Confidence 99999998876653 223344444555654
No 83
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-40 Score=368.65 Aligned_cols=249 Identities=24% Similarity=0.391 Sum_probs=207.3
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|.+.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999976 79999999986543223334668999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999997543 588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
......+||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... ......+.+.....+ ...
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~p-~~~ 239 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKICDGIFYTP-QYL 239 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHHTTCCCCC-TTC
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCcCCC-ccC
Confidence 33345689999999999988775 6799999999999999999999974221 111122222222222 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+||+.||++|||++|+++
T Consensus 240 ---s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 240 ---NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 235788999999999999999999986
No 84
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-40 Score=354.63 Aligned_cols=252 Identities=24% Similarity=0.332 Sum_probs=201.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 368999999999999999999876 799999999865322 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999986543 588999999999999999999999 999999999999999999999999999986543
Q ss_pred CC--CcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 673 DS--SNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 673 ~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
.. .......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||+....... ............
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~-- 228 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------EYSDWKEKKTYL-- 228 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-------HHHHHHTTCTTS--
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHHHhcccccC--
Confidence 22 22345679999999999987775 7789999999999999999999974332110 000111111110
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011122345778999999999999999999975
No 85
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.6e-40 Score=352.20 Aligned_cols=254 Identities=18% Similarity=0.269 Sum_probs=206.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC---CChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM---VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.+.|++.+.||+|+||.||+|+.. +|+.||+|.+........ ...+++.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457999999999999999999976 689999999876433221 2357799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC----ceEEeccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY----EARVSDFG 665 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfG 665 (784)
++||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997643 578899999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 666 IAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 666 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+.....
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSVSY 235 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhccc
Confidence 99876543 2334567999999999999999999999999999999999999998632211 01111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+..........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1110000112235789999999999999999999986
No 86
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.2e-40 Score=350.11 Aligned_cols=256 Identities=25% Similarity=0.402 Sum_probs=197.4
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|+... .+|+|+++.... .....+.|.+|+.++++++||||+++++++.. +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 4679999999999999999998653 589998875422 22235679999999999999999999998754 5689999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999997543 3688999999999999999999999 9999999999999999999999999999865421
Q ss_pred --CCcccccccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 674 --SSNCTELVGTFGYIAPELVY---TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 674 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
........||+.|+|||.+. +..++.++|||||||++|||++|+.||......... ..........+.+...
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~ 262 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI---IFMVGRGYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH---HHHHHHTCCCCCSTTS
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH---HHHHhcCCCCcchhhh
Confidence 22234567999999999986 666888999999999999999999999743321100 0000001111122111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.... ...+.+++.+||+.||++||++.++++.|
T Consensus 263 ~~~~---~~~l~~li~~~l~~~p~~RPs~~~il~~l 295 (307)
T 3lb7_A 263 YKNC---PKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp CSSS---CHHHHHHHHHHSCSSSTTSCCHHHHHHHH
T ss_pred hcCC---cHHHHHHHHHHhhCChhhCcCHHHHHHHH
Confidence 1222 23588899999999999999999999764
No 87
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=361.57 Aligned_cols=255 Identities=22% Similarity=0.366 Sum_probs=206.3
Q ss_pred hcCCCCceeEecccceEEEEEEEc--------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT--------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCS 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 584 (784)
.++|.+.+.||+|+||.||+|+.. .++.||||++.... .....+++.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 467999999999999999999853 34689999987642 222346799999999999 9999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDGA-------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNV 651 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 651 (784)
+++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999976532 23589999999999999999999999 999999999999
Q ss_pred eecCCCceEEeccccccccCCCC--CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccc
Q 042086 652 LLCLDYEARVSDFGIAKFLKPDS--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISS 728 (784)
Q Consensus 652 ll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~ 728 (784)
+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~- 301 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE- 301 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 99999999999999998765432 22334567889999999999999999999999999999999 999986432111
Q ss_pred cccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 729 SSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 729 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+........+... ..++.+++.+||+.||++|||++||++.|
T Consensus 302 -------~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 302 -------LFKLLKEGHRMDKPSNC---TNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp -------HHHHHHTTCCCCCCSSC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -------HHHHHHcCCCCCCCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 01111111111111222 23578899999999999999999999864
No 88
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-41 Score=360.13 Aligned_cols=255 Identities=24% Similarity=0.378 Sum_probs=195.7
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc----
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN---- 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 588 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++...........+.+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999997 4789999999976543333334578999999999999999999999876543
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++|+|.++++..+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 399999999999999997643 588899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 669 FLKPDSS---NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 669 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
.+..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .........
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--------~~~~~~~~~ 236 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--------AYQHVREDP 236 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--------HHHHhcCCC
Confidence 7654322 22345689999999999999999999999999999999999999964322110 000111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+..........+.+++.+||+.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 237 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 1000000112335788999999999999998888765
No 89
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-40 Score=354.03 Aligned_cols=250 Identities=24% Similarity=0.425 Sum_probs=196.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCC----EEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGE----ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
.++|++.+.||+|+||+||+|++. +++ +||+|.+.... .....++|.+|+.++++++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 357999999999999999999864 444 35888876432 3345678999999999999999999999998754
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 789999999999999997654 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC--
Q 042086 669 FLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-- 743 (784)
Q Consensus 669 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-- 743 (784)
.+...... .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||+...... ....+..
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---------~~~~~~~~~ 236 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---------ISSILEKGE 236 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------HHHHHHTTC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---------HHHHHHcCC
Confidence 76543322 233456889999999999999999999999999999999 999997432211 1111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 744 RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 744 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+...+. .....+.+++.+||+.||++|||+.++++.|
T Consensus 237 ~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~ell~~l 273 (327)
T 3poz_A 237 RLPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp CCCCCT----TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred CCCCCc----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 111111 1233578899999999999999999999754
No 90
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=379.02 Aligned_cols=366 Identities=23% Similarity=0.234 Sum_probs=220.4
Q ss_pred CeEEEEeCCCcc-------cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEcc
Q 042086 61 RVISINLSTVGL-------KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLS 133 (784)
Q Consensus 61 ~v~~l~l~~~~~-------~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 133 (784)
++..+++....+ ...+++|++|+|++|+|++..+..|+++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 566777766543 2467788888888888888878888888888888888888887777888888888888888
Q ss_pred CCccCCCCCcCccCCCcCcEEeecCCCccc-ccCCccccccccceeeccccccCCCccccccCccCC----ceeeccccc
Q 042086 134 ENQLSGSIPPTLGNLSNLAVLHLYGNSLSG-SIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNL----VVLHLFENS 208 (784)
Q Consensus 134 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~n~ 208 (784)
+|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..+..++.+++| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888886665568888888888888888876 357788888888888888887776555555555544 445554444
Q ss_pred cCCccc--------------------------------------------------------------------------
Q 042086 209 LFGSIP-------------------------------------------------------------------------- 214 (784)
Q Consensus 209 l~~~~~-------------------------------------------------------------------------- 214 (784)
+.+..+
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 332221
Q ss_pred -------hhhhcccccceeccCCCccccccCCCC------------------------------------------cCCC
Q 042086 215 -------SILGNLKMLLHLGLSTNHLSGVIPLSI------------------------------------------GNLN 245 (784)
Q Consensus 215 -------~~l~~l~~L~~L~L~~n~l~~~~~~~l------------------------------------------~~l~ 245 (784)
..+..+++|+.|++++|.+++ +|..+ ..++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 347 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCC
Confidence 222333444444444444331 12111 3456
Q ss_pred CcceEEecCCCCCCCC-cccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCc-ccccccccceEE
Q 042086 246 NLIGLYLYDNQLSVGE-IPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIP-ETLGNLLKLHYL 323 (784)
Q Consensus 246 ~L~~L~L~~n~l~~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~l~~l~~L~~L 323 (784)
+|++|++++|+++... .+..+..+++|++|++++|.+++..+. +..+++|+.|++++|.+++..+ ..+.++++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 6666666666665211 133455556666666666665543322 5555555555555555554433 345555555555
Q ss_pred ecccccccCCCchhhhcccccCeeccCCcccc-ccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCC
Q 042086 324 NLSNNQFRKGFPVELEKLIQLSELDLSLNILE-GKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNEL 402 (784)
Q Consensus 324 ~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 402 (784)
++++|.+.+..|..+..+++|+.|++++|.+. +.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 506 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcC
Confidence 55555555555555555555555555555554 34555555555555555555555555555555555555555555555
Q ss_pred cccCCCC-CCCcCCCcccccCCCCCCC
Q 042086 403 RGPIPNS-RIFQYDPMEALQGNKGLCG 428 (784)
Q Consensus 403 ~~~~p~~-~~~~~~~~~~~~~n~~~c~ 428 (784)
++..|.. ..+.......+.+|+..|.
T Consensus 507 ~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 507 KSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCHHHhhcccCCcEEEecCCcccCC
Confidence 5543321 1222333334455555544
No 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.3e-41 Score=356.21 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=182.1
Q ss_pred ceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEecCCceEEEEeccc
Q 042086 520 KYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSHPRNSFLVYEYLE 597 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 597 (784)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 478999999999999976 6899999998642 3567889999999996 9999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC---ceEEeccccccccCCCC
Q 042086 598 RGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY---EARVSDFGIAKFLKPDS 674 (784)
Q Consensus 598 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfG~a~~~~~~~ 674 (784)
+|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++......
T Consensus 90 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999999998753 588899999999999999999999 999999999999998765 89999999998776555
Q ss_pred CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHH
Q 042086 675 SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQD 754 (784)
Q Consensus 675 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 754 (784)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .........+..............
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWKN 242 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCcccccC
Confidence 5556678899999999999999999999999999999999999999743221000 000111122222222222111122
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 755 ELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 755 ~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...++.+++.+||+.||++|||++|+++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 3456889999999999999999999874
No 92
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7e-41 Score=373.57 Aligned_cols=251 Identities=22% Similarity=0.432 Sum_probs=204.5
Q ss_pred HhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
..++|++.+.||+|+||.||+|..++++.||||+++.. ....++|.+|+.+++.++||||+++++++. .+..++|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT----SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC----CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 34678999999999999999999988999999999763 234788999999999999999999999986 5678999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 999999999999975321 2478889999999999999999999 999999999999999999999999999987643
Q ss_pred CCCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCCC
Q 042086 673 DSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILD-PRLPTPP 749 (784)
Q Consensus 673 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~ 749 (784)
.... .....+++.|+|||.+....++.++|||||||++|||+| |+.||....... ....+.. .+++.+
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~~~~~- 407 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--------VIRALERGYRMPRP- 407 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHHHHHHTCCCCCC-
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCC-
Confidence 2111 123346788999999998999999999999999999999 999997432211 0001111 122222
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
... ...+.+++.+||+.||++|||+++|++.|
T Consensus 408 ~~~---~~~l~~li~~cl~~dp~~RPt~~~i~~~L 439 (454)
T 1qcf_A 408 ENC---PEELYNIMMRCWKNRPEERPTFEYIQSVL 439 (454)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 222 23578899999999999999999998764
No 93
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.8e-40 Score=379.40 Aligned_cols=181 Identities=28% Similarity=0.321 Sum_probs=93.2
Q ss_pred CcccceeEEcCCC-CeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCC
Q 042086 48 PCAWFGIQCNPAK-RVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKF 126 (784)
Q Consensus 48 ~C~w~gv~C~~~~-~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 126 (784)
.|.|.|+ |+..+ .++.+ + .+-.++|++|+|++|+|++..|..|.++++|++|+|++|++++..|.+|+.+++
T Consensus 3 ~C~~~~~-c~~~~~~l~~i--p----~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSI--P----SGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp EECTTSE-EECTTSCCSSC--C----SCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCce-EECCCCccccc--c----ccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 4999998 87532 12111 0 011234555555555555555555555555555555555555555555555555
Q ss_pred CCEEEccCCccCCCCCcCccCCCcCcEEeecCCCccc-ccCCccccccccceeeccccccCCCcc-ccccCccCCceeec
Q 042086 127 LYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSG-SIPSIIGNLKSLFYLHLSSNQLSGSIP-ISLGNLSNLVVLHL 204 (784)
Q Consensus 127 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L 204 (784)
|++|+|++|++++..|..|+++++|++|+|++|.+++ ..|..+.++++|++|++++|.+.+.+| ..|.++++|++|++
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 5555555555554444445555555555555555543 233445555555555555554222222 34555555555555
Q ss_pred cccccCCccchhh------------------------hcccccceeccCCCcccc
Q 042086 205 FENSLFGSIPSIL------------------------GNLKMLLHLGLSTNHLSG 235 (784)
Q Consensus 205 ~~n~l~~~~~~~l------------------------~~l~~L~~L~L~~n~l~~ 235 (784)
++|++++..|..+ ..+++|++|++++|++++
T Consensus 156 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 156 KALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 5555544444443 346667777777777665
No 94
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.5e-40 Score=366.40 Aligned_cols=246 Identities=26% Similarity=0.415 Sum_probs=200.9
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC-ceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR-NSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv 592 (784)
.++|++.+.||+|+||.||+|..+ |+.||||+++... ..++|.+|+.++++++||||+++++++.+.+ ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 467889999999999999999986 7899999987532 4678999999999999999999999987655 78999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++..+. ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 999999999999986432 3468899999999999999999999 999999999999999999999999999986432
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-RLPTPPQ 750 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~ 750 (784)
. .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... ....+... ++..+ .
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~~~~p-~ 409 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------VVPRVEKGYKMDAP-D 409 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--------HHHHHHTTCCCCCC-T
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCC-C
Confidence 2 223367889999999999999999999999999999998 999987432211 01111111 22222 2
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.. ...+.+++.+||+.||++|||+.++++.|
T Consensus 410 ~~---~~~l~~li~~cl~~dp~~Rpt~~~l~~~L 440 (450)
T 1k9a_A 410 GC---PPAVYDVMKNCWHLDAATRPTFLQLREQL 440 (450)
T ss_dssp TC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cC---CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 22 23578899999999999999999998764
No 95
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-39 Score=378.29 Aligned_cols=330 Identities=25% Similarity=0.260 Sum_probs=239.4
Q ss_pred CCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEe
Q 042086 76 LKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLH 155 (784)
Q Consensus 76 l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 155 (784)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 36899999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred ecCCCcccccCCccccccccceeeccccccCC-CccccccCccCCceeeccccccCCccchhhhcccccc----eeccCC
Q 042086 156 LYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSG-SIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLL----HLGLST 230 (784)
Q Consensus 156 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~----~L~L~~ 230 (784)
|++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..++.+++|+ +|++++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998887899999999999999999986 5799999999999999999999988888888777654 566666
Q ss_pred CccccccCCCCc--------------------------------------------------------------------
Q 042086 231 NHLSGVIPLSIG-------------------------------------------------------------------- 242 (784)
Q Consensus 231 n~l~~~~~~~l~-------------------------------------------------------------------- 242 (784)
|++++..+..+.
T Consensus 191 n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 191 NPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 666543332221
Q ss_pred ----------------------------------CCCCcceEEecCCCCCCCCcc--------------------ccccc
Q 042086 243 ----------------------------------NLNNLIGLYLYDNQLSVGEIP--------------------IEIGK 268 (784)
Q Consensus 243 ----------------------------------~l~~L~~L~L~~n~l~~~~~~--------------------~~l~~ 268 (784)
.+++|++|++++|++. .+| ..+..
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~--~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK--QFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCS--SCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCc--ccccCCCCccceeeccCCcCccchhhcc
Confidence 1122223333332221 111 01223
Q ss_pred ccccceEeccCccccCC-------------------------CCccccCCCccceeecccCccCCCCc-ccccccccceE
Q 042086 269 LSSLNYLVLNGNQLYGN-------------------------LPRALGSLTELEYLDLSTNKLGNSIP-ETLGNLLKLHY 322 (784)
Q Consensus 269 l~~L~~L~l~~n~l~~~-------------------------~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~l~~l~~L~~ 322 (784)
+++|++|++++|++++. +|..+..+++|+.|++++|.+++..| ..+..+++|++
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 34444444444444432 33455555666666666666665555 45666666666
Q ss_pred EecccccccCCCchhhhcccccCeeccCCccccc-cccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCC
Q 042086 323 LNLSNNQFRKGFPVELEKLIQLSELDLSLNILEG-KIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNE 401 (784)
Q Consensus 323 L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~ 401 (784)
|++++|++++..|..+..+++|+.|++++|.+.+ .+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 6666666666666666666666666666666665 356666666666666666666666666666666666666666666
Q ss_pred CcccCC
Q 042086 402 LRGPIP 407 (784)
Q Consensus 402 l~~~~p 407 (784)
+++..|
T Consensus 509 l~~~~~ 514 (606)
T 3vq2_A 509 LLFLDS 514 (606)
T ss_dssp CSCEEG
T ss_pred CCCcCH
Confidence 666544
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.1e-39 Score=344.36 Aligned_cols=263 Identities=20% Similarity=0.316 Sum_probs=191.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 457999999999999999999875 68999999987543 233457889999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDG---AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
|||++ |+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 59999986432 223588999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cc---ccccccc
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-------SS---NRNISLN 738 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-------~~---~~~~~~~ 738 (784)
............||+.|+|||.+.+. .++.++|||||||++|||++|+.||......... .. .......
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 76544445566889999999999764 5899999999999999999999999643221000 00 0000000
Q ss_pred c--ccCCCCCC-CCCCCH---------HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 739 E--ILDPRLPT-PPQNVQ---------DELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 739 ~--~~d~~~~~-~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. ...+.... .+.... ....++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 00001100 000000 11236889999999999999999999975
No 97
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=362.87 Aligned_cols=255 Identities=23% Similarity=0.374 Sum_probs=203.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 587 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......++.+|+.++++++||||+++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 357999999999999999999843 56789999986532 2223457899999999999999999999999999
Q ss_pred ceEEEEecccCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC---ceE
Q 042086 588 NSFLVYEYLERGSLATILSNDGA----IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY---EAR 660 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~k 660 (784)
..++||||+++|+|.++++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 99999999999999999975432 23589999999999999999999999 999999999999999555 599
Q ss_pred EeccccccccCCCC--CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccc
Q 042086 661 VSDFGIAKFLKPDS--SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISL 737 (784)
Q Consensus 661 l~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 737 (784)
|+|||+++.+.... .......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... ...
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--------~~~ 296 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVL 296 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHH
Confidence 99999998653221 22344567899999999999999999999999999999998 99998743221 111
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 738 NEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 738 ~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+........+... ...+.+++.+||+.||++|||+.+|++.|
T Consensus 297 ~~i~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~eil~~l 340 (367)
T 3l9p_A 297 EFVTSGGRMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERI 340 (367)
T ss_dssp HHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHcCCCCCCCccC---CHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 111111111112222 23578899999999999999999999864
No 98
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.9e-40 Score=373.54 Aligned_cols=251 Identities=23% Similarity=0.407 Sum_probs=206.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
..+|++.+.||+|+||.||+|++. +++.||||.++.. ....++|.+|+.++++++||||+++++++.+.+..++|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc----ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 456889999999999999999987 4889999998763 23477899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 295 ~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999976432 4588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCCC
Q 042086 673 DSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILD-PRLPTPP 749 (784)
Q Consensus 673 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~ 749 (784)
.... .....+++.|+|||.+....++.++|||||||++|||+| |+.||....... ....+.. .+...+
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~~- 441 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------VYELLEKDYRMERP- 441 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HHHHHHTTCCCCCC-
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCC-
Confidence 3221 223456788999999999999999999999999999999 999987433211 0000111 112221
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
... ...+.+++.+||+.||++|||+.+|++.|
T Consensus 442 ~~~---~~~l~~li~~cl~~dP~~RPs~~el~~~L 473 (495)
T 1opk_A 442 EGC---PEKVYELMRACWQWNPSDRPSFAEIHQAF 473 (495)
T ss_dssp TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 222 23578899999999999999999998864
No 99
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.6e-40 Score=346.67 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=208.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357999999999999999999976 6889999998764333333456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++...+ .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999999987543 578899999999999999999999 999999999999999999999999999988765
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.........||+.|+|||.+.+..++.++||||||+++|||++|+.||+...... ....+.......+ ...
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~-~~~ 238 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNEYSIP-KHI 238 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCCCC-TTS
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhhccCCCc-ccc
Confidence 5445556779999999999999889999999999999999999999997432110 0111111122111 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+||+.||++|||++|+++
T Consensus 239 ---~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 239 ---NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 235778999999999999999999986
No 100
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.9e-40 Score=350.86 Aligned_cols=255 Identities=23% Similarity=0.379 Sum_probs=205.8
Q ss_pred hcCCCCceeEecccceEEEEEEE------cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 587 (784)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++.++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 46799999999999999999986 245899999987532 2233567899999999999999999999999999
Q ss_pred ceEEEEecccCCCHHHHHhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCC
Q 042086 588 NSFLVYEYLERGSLATILSNDGA---------------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 646 (784)
..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999976542 12488999999999999999999999 9999999
Q ss_pred CCCCeeecCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 042086 647 SSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFI 723 (784)
Q Consensus 647 k~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~ 723 (784)
||+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876543322 233456788999999999889999999999999999999 99998643
Q ss_pred ccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 724 SSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.... ....+........+.. ....+.+++.+||+.||++|||+.++++.|
T Consensus 257 ~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~l~~~l 306 (314)
T 2ivs_A 257 PPER--------LFNLLKTGHRMERPDN---CSEEMYRLMLQCWKQEPDKRPVFADISKDL 306 (314)
T ss_dssp CGGG--------HHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CHHH--------HHHHhhcCCcCCCCcc---CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 2211 0111111111111112 223578899999999999999999998764
No 101
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.1e-40 Score=343.24 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=205.9
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|+..+++.||+|++.... ...+++.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 35789999999999999999999889999999997632 23578999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997653 3578899999999999999999999 9999999999999999999999999999876432
Q ss_pred C-CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 674 S-SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 674 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
. .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+........+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~i~~~~~~~~~~~ 229 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPRL 229 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCCCCCCTT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--------HHHHHhcCCcCCCCcc
Confidence 1 11233456788999999998889999999999999999999 899987432111 0111111111111111
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
. ...+.+++.+||+.||++|||++++++.|
T Consensus 230 ~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (267)
T 3t9t_A 230 A---STHVYQIMNHCWRERPEDRPAFSRLLRQL 259 (267)
T ss_dssp S---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred C---cHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 2 23578899999999999999999999864
No 102
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-40 Score=356.96 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=202.6
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 590 (784)
..++|++.+.||+|+||.||+|+.+ +++.||+|++.... ..+.+|++++.++ +||||+++++++.+++..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-------~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-------CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-------CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 3567999999999999999999876 68999999987532 2345788888888 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC----CceEEecccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD----YEARVSDFGI 666 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfG~ 666 (784)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||++.++ +.+||+|||+
T Consensus 93 lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999999997653 588899999999999999999999 99999999999998543 3599999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
++.............||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .......+......
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~~~~~i~~~~~~ 241 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-----PEEILARIGSGKFS 241 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-----HHHHHHHHHHCCCC
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-----HHHHHHHHccCCcc
Confidence 9987655555566789999999999988889999999999999999999999996321110 00111111111221
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...........++.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111223346788999999999999999999875
No 103
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.1e-41 Score=351.75 Aligned_cols=259 Identities=25% Similarity=0.394 Sum_probs=199.4
Q ss_pred hcCCCCceeEecccceEEEEEEE-----cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec--C
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH--P 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~ 586 (784)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.|.+|++++++++||||+++++++.. .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46799999999999999999984 26899999998753 22234679999999999999999999999854 3
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 56899999999999999997653 2588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccc----ccccccc----c
Q 042086 667 AKFLKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSIS----SSSSNRN----I 735 (784)
Q Consensus 667 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~----~~~~~~~----~ 735 (784)
++........ .....++..|+|||.+.+..++.++||||||+++|||+||..|+....... ....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 9876543221 233457778999999999999999999999999999999999986422110 0000000 0
Q ss_pred ccccccCC-CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 736 SLNEILDP-RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 736 ~~~~~~d~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+... +.+.+ ... ..++.+++.+||+.||++|||++|+++.|
T Consensus 241 ~~~~~~~~~~~~~~-~~~---~~~l~~li~~~l~~dp~~Rps~~el~~~L 286 (295)
T 3ugc_A 241 LIELLKNNGRLPRP-DGC---PDEIYMIMTECWNNNVNQRPSFRDLALRV 286 (295)
T ss_dssp HHHHHHTTCCCCCC-TTC---CHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HHHHHhccCcCCCC-cCc---CHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 00011111 12221 222 23588899999999999999999999864
No 104
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.5e-40 Score=343.53 Aligned_cols=253 Identities=26% Similarity=0.453 Sum_probs=192.3
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCC-CCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCE-MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. ++.||||++....... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357999999999999999999986 8899999987643322 23357899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC--------CCceEEecc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL--------DYEARVSDF 664 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--------~~~~kl~Df 664 (784)
|||+++++|.++++. ..+++..+..++.|+++|++|||++...+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999864 25888999999999999999999992222999999999999986 678999999
Q ss_pred ccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPR 744 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~ 744 (784)
|++....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ..+....
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--------~~~~~~~ 230 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA--------YGVAMNK 230 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--------HHHHTSC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------HhhhcCC
Confidence 9998765332 23457899999999999999999999999999999999999999743321100 0011111
Q ss_pred C-CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 745 L-PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 745 ~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
. ...+... ...+.+++.+||+.||++|||+.|+++.|
T Consensus 231 ~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~L 268 (271)
T 3dtc_A 231 LALPIPSTC---PEPFAKLMEDCWNPDPHSRPSFTNILDQL 268 (271)
T ss_dssp CCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCccc---CHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 1 1111112 23588899999999999999999999875
No 105
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=361.56 Aligned_cols=246 Identities=25% Similarity=0.302 Sum_probs=195.7
Q ss_pred ceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEEecccC
Q 042086 520 KYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLER 598 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 598 (784)
.+.||+|+||.||+|+.. +|+.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 578999999999999875 79999999987532 22456899999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee--cCCCceEEeccccccccCCCCCc
Q 042086 599 GSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL--CLDYEARVSDFGIAKFLKPDSSN 676 (784)
Q Consensus 599 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill--~~~~~~kl~DfG~a~~~~~~~~~ 676 (784)
|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.... .
T Consensus 171 ~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~ 244 (373)
T 2x4f_A 171 GELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-K 244 (373)
T ss_dssp CEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-B
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-c
Confidence 99999886543 3588899999999999999999999 99999999999999 567899999999998775432 3
Q ss_pred ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHHHH
Q 042086 677 CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDEL 756 (784)
Q Consensus 677 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 756 (784)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+........
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~ 316 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACRWDLEDEEFQDIS 316 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCSCSGGGTTSC
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccCCCChhhhccCC
Confidence 34457999999999999889999999999999999999999999643221 1111122111111111111223
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 757 ISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 757 ~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.++.+++.+||+.||++|||+.|+++
T Consensus 317 ~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 317 EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 46889999999999999999999986
No 106
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.6e-41 Score=362.94 Aligned_cols=263 Identities=21% Similarity=0.345 Sum_probs=207.0
Q ss_pred HHHHHHHhcCCCCceeEecccceEEEEEEE------cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeE
Q 042086 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKF 579 (784)
Q Consensus 507 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 579 (784)
..++....++|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+++++++ +||||+++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 345555678899999999999999999974 256899999997532 222346799999999999 79999999
Q ss_pred EeEEecCCc-eEEEEecccCCCHHHHHhcCCC------------------------------------------------
Q 042086 580 YGFCSHPRN-SFLVYEYLERGSLATILSNDGA------------------------------------------------ 610 (784)
Q Consensus 580 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 610 (784)
++++.+.+. .++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987554 8999999999999999976432
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCCCC
Q 042086 611 ---------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSS 675 (784)
Q Consensus 611 ---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 675 (784)
...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 11288999999999999999999999 999999999999999999999999999987644322
Q ss_pred --cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 676 --NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 676 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
......||+.|+|||++.+..++.++|||||||++|||+| |+.||....... .....+........+...
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 321 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYT 321 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-------HHHHHHHHTCCCCCCTTC
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-------HHHHHHHcCCCCCCCCCC
Confidence 2345678899999999999999999999999999999998 999986432111 000001111111111112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..++.+++.+||+.||++|||+.|+++.|
T Consensus 322 ---~~~l~~li~~~l~~dP~~Rps~~ell~~L 350 (359)
T 3vhe_A 322 ---TPEMYQTMLDCWHGEPSQRPTFSELVEHL 350 (359)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 23578899999999999999999999864
No 107
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.5e-40 Score=373.88 Aligned_cols=258 Identities=22% Similarity=0.273 Sum_probs=210.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357899999999999999999986 6999999998654333334567899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 593 YEYLERGSLATILSNDGA-IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
|||+++|+|.+++..... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999976432 34689999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.......+ ..
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~----~~~~~~~~i~~~~~~~p-~~ 415 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRVLEQAVTYP-DK 415 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC----CHHHHHHHHHHCCCCCC-TT
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch----hHHHHHHHHhhcccCCC-cc
Confidence 55444455689999999999999999999999999999999999999997432110 00111112222222222 11
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPM-----HTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~-----~~vl~ 782 (784)
....+.+++.+||+.||++||++ +++++
T Consensus 416 ---~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 416 ---FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 23357789999999999999975 56653
No 108
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-40 Score=350.03 Aligned_cols=246 Identities=20% Similarity=0.306 Sum_probs=205.4
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC-----CChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM-----VPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
..++|++.+.||+|+||.||+|+.. +++.||||++........ ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3568999999999999999999865 789999999976543221 1345788999999999999999999999999
Q ss_pred CceEEEEecccCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccc
Q 042086 587 RNSFLVYEYLERG-SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665 (784)
Q Consensus 587 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 665 (784)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999997654 488899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042086 666 IAKFLKPDSSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPR 744 (784)
Q Consensus 666 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~ 744 (784)
+++...... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||..... .....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~ 240 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAA 240 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhc
Confidence 998775433 3345679999999999988876 7899999999999999999999864221 11111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
...+ ... ..++.+++.+||+.||++|||++++++.
T Consensus 241 ~~~~-~~~---~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 IHPP-YLV---SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCS-SCC---CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred cCCC-ccc---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 111 2357889999999999999999999863
No 109
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-40 Score=358.03 Aligned_cols=262 Identities=24% Similarity=0.280 Sum_probs=202.6
Q ss_pred HHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCC--CCCCChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 510 IVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWP--CEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 510 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
+....++|++.+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456678999999999999999999875 788999999864321 1233467899999999999999999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCC-------------------------------------CCCCCHHHHHHHHHHHHHH
Q 042086 587 RNSFLVYEYLERGSLATILSNDGA-------------------------------------IEEFNWTVRMNVIRSVANA 629 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~i~~~ 629 (784)
+..++||||+++|+|.+++..... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852100 1123567788899999999
Q ss_pred HHHHhhCCCCCeEEeCCCCCCeeecCCC--ceEEeccccccccCCCCC----ccccccccccccccccccc--CCcCcch
Q 042086 630 LSYMHHDCFPPIVHRDISSKNVLLCLDY--EARVSDFGIAKFLKPDSS----NCTELVGTFGYIAPELVYT--MKVTEKC 701 (784)
Q Consensus 630 l~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~DfG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~s 701 (784)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986543221 2345679999999999975 6788999
Q ss_pred hHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 042086 702 DVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVC 781 (784)
Q Consensus 702 DvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl 781 (784)
|||||||++|||++|+.||...... .....+..................+.+++.+||+.||++|||+.+++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999999999999643321 11112222222111111112234688999999999999999999998
Q ss_pred H
Q 042086 782 Q 782 (784)
Q Consensus 782 ~ 782 (784)
+
T Consensus 330 ~ 330 (345)
T 3hko_A 330 Q 330 (345)
T ss_dssp H
T ss_pred c
Confidence 6
No 110
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.9e-40 Score=344.50 Aligned_cols=253 Identities=19% Similarity=0.277 Sum_probs=204.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 468999999999999999999876 689999999865422 222346788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc---eEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfG~a~~ 669 (784)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 84 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999999887643 478899999999999999999999 9999999999999987655 99999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
.... .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+.......+.
T Consensus 158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~ 228 (284)
T 3kk8_A 158 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYAQIKAGAYDYPS 228 (284)
T ss_dssp CCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCCCCT
T ss_pred cccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--------HHHHHHhccccCCc
Confidence 6533 33345679999999999999999999999999999999999999986432211 00111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+|++.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111122335788999999999999999999986
No 111
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3e-40 Score=344.75 Aligned_cols=252 Identities=21% Similarity=0.363 Sum_probs=191.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.++|++.+.||+|+||.||+|+.. .+..||+|.+.... .....+.+.+|+.++++++||||+++++++. .+..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 467999999999999999999874 35679999986532 2223567999999999999999999999985 4678
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999997653 2588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCC
Q 042086 670 LKPDSS-NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPT 747 (784)
Q Consensus 670 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 747 (784)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....+.......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--------~~~~i~~~~~~~ 237 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--------VIGRIENGERLP 237 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCCCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--------HHHHHHcCCCCC
Confidence 654322 2233456789999999998899999999999999999997 999987432211 111111111111
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 748 PPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 748 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+... ...+.+++.+||+.||++|||+.++++.|
T Consensus 238 ~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~l 271 (281)
T 1mp8_A 238 MPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQL 271 (281)
T ss_dssp CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11222 23578899999999999999999999864
No 112
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=367.48 Aligned_cols=258 Identities=25% Similarity=0.300 Sum_probs=206.0
Q ss_pred HHHHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 508 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
.+.....++|++.+.||+|+||.||+|+.+ +|+.||+|++.+.........+.+.+|..++..++||||+++++++.+.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344445678999999999999999999976 7999999998653211222345689999999999999999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
+..++||||+++|+|.+++...+ ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999997643 2588899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc-ccccccccccccccccc-------cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042086 667 AKFLKPDSSN-CTELVGTFGYIAPELVY-------TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLN 738 (784)
Q Consensus 667 a~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 738 (784)
++.+...... ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~ 280 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--------ETYG 280 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--------HHHH
Confidence 9877554332 23468999999999997 456899999999999999999999999642211 1111
Q ss_pred cccC----CCCCCCCCCCHHHHHHHHHHHHhcccCCCCCC---CCHHHHHH
Q 042086 739 EILD----PRLPTPPQNVQDELISIVEVAFLCLNESPESR---PPMHTVCQ 782 (784)
Q Consensus 739 ~~~d----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~~vl~ 782 (784)
.++. ...+..... ...++.+++.+||+ +|++| |+++|+++
T Consensus 281 ~i~~~~~~~~~p~~~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 281 KIVHYKEHLSLPLVDEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHTHHHHCCCC----C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHhcccCcCCCccccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111 011111111 22357889999999 99998 68999875
No 113
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.9e-40 Score=355.30 Aligned_cols=252 Identities=24% Similarity=0.308 Sum_probs=194.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----AAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS----TTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC----ccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 468999999999999999999976 7999999998753 22356789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc--eEEecccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE--ARVSDFGIAKFL 670 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfG~a~~~ 670 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999997543 588899999999999999999999 9999999999999987765 999999999754
Q ss_pred CCCCCcccccccccccccccccccCCcCcc-hhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEK-CDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
... .......||+.|+|||.+.+..++.+ +|||||||++|||++|+.||........ .......+.......+.
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD----YRKTIQRILSVKYSIPD 243 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC----HHHHHHHHHTTCCCCCT
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH----HHHHHHHHhcCCCCCCC
Confidence 322 22345679999999999988887665 8999999999999999999974332110 01111112222221111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 244 D--IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp T--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred c--CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 1 011235788999999999999999999986
No 114
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8e-41 Score=357.69 Aligned_cols=254 Identities=18% Similarity=0.227 Sum_probs=203.5
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++.+ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-----RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-----SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-----chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 35799999999999999999996 478999999986532 245789999999999 99999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc-----eEEecccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE-----ARVSDFGI 666 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~DfG~ 666 (784)
||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 899999998642 3689999999999999999999999 9999999999999998887 99999999
Q ss_pred ccccCCCCCc-------ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 667 AKFLKPDSSN-------CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 667 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
++.+...... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ......
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-----~~~~~~ 231 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-----KERYQK 231 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-----HHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-----HHHHHH
Confidence 9876543321 2456799999999999999999999999999999999999999974321100 000011
Q ss_pred ccCCCCCCCCCC-CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 740 ILDPRLPTPPQN-VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 740 ~~d~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+.......+... ..... ++.+++..||+.||++||++++|.+.|
T Consensus 232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l 276 (330)
T 2izr_A 232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 276 (330)
T ss_dssp HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 111111100000 00012 688999999999999999999998754
No 115
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.3e-40 Score=344.13 Aligned_cols=249 Identities=28% Similarity=0.435 Sum_probs=201.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999876 6789999998653222233456799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999865433
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.......+ ...
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~-~~~ 230 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--------TYKRISRVEFTFP-DFV 230 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCCCCC-TTS
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--------HHHHHHhCCCCCC-CcC
Confidence 2 2345678999999999999999999999999999999999999987432111 1111111111111 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+||+.||++|||++|+++
T Consensus 231 ---~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 231 ---TEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ---CHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 235778999999999999999999986
No 116
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.6e-40 Score=343.46 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=203.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF---VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 457999999999999999999876 57899999987642 23467899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a~~ 669 (784)
|||+++++|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++..
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999987643 478899999999999999999999 99999999999999 7889999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
+.... ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||...... .....+.......+.
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 228 (277)
T 3f3z_A 159 FKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREGTFTFPE 228 (277)
T ss_dssp CCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCH
T ss_pred ccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCCc
Confidence 65433 33456799999999998654 899999999999999999999999743221 111111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+|++.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000012346889999999999999999999975
No 117
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-40 Score=374.52 Aligned_cols=256 Identities=23% Similarity=0.268 Sum_probs=207.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 457999999999999999999876 7999999998654322334466789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 263 mEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999976542 3589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.......+ .
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~~~i~~~~~~~p-~-- 410 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKEVPEEYS-E-- 410 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHHHHHHHCCCCCC-T--
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHHHHhhcccccCC-c--
Confidence 32 3345689999999999999899999999999999999999999997432110 00000011111111111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRP-----PMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RP-----s~~~vl~ 782 (784)
....++.+++.+||+.||++|| +++||++
T Consensus 411 -~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 411 -RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 1233578899999999999999 7888875
No 118
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.4e-40 Score=352.55 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=208.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|.+.+.||+|+||.||+++.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999976 5889999998764333333456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999987543 588899999999999999999999 999999999999999999999999999988765
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.........||+.|+|||.+.+..++.++||||||+++|||++|+.||+...... ....+.......+ ...
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~-~~~ 264 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNEYSIP-KHI 264 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCCCCC-TTS
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHhcCCCCCC-ccC
Confidence 5445556789999999999999899999999999999999999999997432110 0011111111111 111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+||+.||++|||++|+++
T Consensus 265 ---~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 265 ---NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 235778999999999999999999986
No 119
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.2e-40 Score=380.54 Aligned_cols=337 Identities=21% Similarity=0.186 Sum_probs=299.1
Q ss_pred CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEE
Q 042086 75 NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVL 154 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 154 (784)
.+.+++.|++++|.++...+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46789999999999998777778999999999999999999999999999999999999999999888899999999999
Q ss_pred eecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccc
Q 042086 155 HLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLS 234 (784)
Q Consensus 155 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 234 (784)
+|++|.+++..+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.. +..+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999776677899999999999999999988989999999999999999998653 667889999999999998
Q ss_pred cccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccc
Q 042086 235 GVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETL 314 (784)
Q Consensus 235 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l 314 (784)
+. ...++|+.|++++|.++ .++..+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|
T Consensus 206 ~l-----~~~~~L~~L~ls~n~l~--~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 274 (597)
T 3oja_B 206 TL-----AIPIAVEELDASHNSIN--VVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPF 274 (597)
T ss_dssp EE-----ECCTTCSEEECCSSCCC--EEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred cc-----cCCchhheeeccCCccc--cccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHh
Confidence 53 34468999999999987 344333 3689999999999996 4679999999999999999999999999
Q ss_pred cccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceE
Q 042086 315 GNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSC 394 (784)
Q Consensus 315 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 394 (784)
..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|++++.. +..+++|+.
T Consensus 275 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~ 349 (597)
T 3oja_B 275 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKN 349 (597)
T ss_dssp TTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSE
T ss_pred cCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCE
Confidence 999999999999999998 6777888999999999999999 78888999999999999999999774 667889999
Q ss_pred EEcCCCCCcccCCCCCCCcCCCcccccCCCCCCCCCC
Q 042086 395 IDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCGDIK 431 (784)
Q Consensus 395 l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 431 (784)
|++++|+|.|.++.. .+.......+.+++..|+.+.
T Consensus 350 L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 350 LTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp EECCSSCEEHHHHHH-HTTTCCTTTBCCCCCCCCTTC
T ss_pred EEeeCCCCCChhHHH-HHHHHhhhccccccccCCcch
Confidence 999999999875432 344455556778889998753
No 120
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.2e-40 Score=358.76 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=191.6
Q ss_pred cCCCCc-eeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhc-cCCCceeeEEeEEec----CC
Q 042086 515 NGFDVK-YCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTE-LRHRSIVKFYGFCSH----PR 587 (784)
Q Consensus 515 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~ 587 (784)
++|.+. +.||+|+||+||+|+.. +++.||||++.. ...+.+|+.++.+ .+||||+++++++.. ..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 456666 78999999999999876 789999999853 3467889998754 489999999999865 56
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---CCceEEecc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---DYEARVSDF 664 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~Df 664 (784)
..++||||+++|+|.+++...+. ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 78999999999999999986432 3589999999999999999999999 9999999999999997 788999999
Q ss_pred ccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPR 744 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~ 744 (784)
|+++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....
T Consensus 209 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~~~~~i~~~~ 283 (400)
T 1nxk_A 209 GFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMGQ 283 (400)
T ss_dssp TTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC----CSHHHHHHHTC
T ss_pred ccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc----HHHHHHHHcCc
Confidence 999876532 2334567899999999999999999999999999999999999999643321100 00001111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.........++.+++.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111123346889999999999999999999986
No 121
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-40 Score=353.59 Aligned_cols=256 Identities=23% Similarity=0.380 Sum_probs=204.3
Q ss_pred HhcCCCCceeEecccceEEEEEEE------cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEec
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSH 585 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 585 (784)
..++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 457899999999999999999986 246689999997532 233467899999999999 89999999999999
Q ss_pred CCceEEEEecccCCCHHHHHhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeC
Q 042086 586 PRNSFLVYEYLERGSLATILSNDGAI--------------------EEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRD 645 (784)
Q Consensus 586 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 645 (784)
.+..++||||+++|+|.+++...... ..+++..+..++.|++.||+|||++ +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999764321 2478999999999999999999999 999999
Q ss_pred CCCCCeeecCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCc
Q 042086 646 ISSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDF 722 (784)
Q Consensus 646 lk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~ 722 (784)
|||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++|||||||++|||+| |..||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 234567889999999999999999999999999999998 9999874
Q ss_pred cccccccccccccccccccCCCC-CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 723 ISSISSSSSNRNISLNEILDPRL-PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..... .....+.... ...+... ...+.+++.+||+.||++|||+.++++.|
T Consensus 278 ~~~~~--------~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 278 IPVDA--------NFYKLIQNGFKMDQPFYA---TEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp CCCSH--------HHHHHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCcHH--------HHHHHHhcCCCCCCCCCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 32211 0011111111 1111112 23578899999999999999999999864
No 122
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=347.58 Aligned_cols=250 Identities=28% Similarity=0.455 Sum_probs=194.8
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEEe
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYE 594 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 594 (784)
++|++.+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 56889999999999999999886 788999998642 346789999999999999999999998864 5799999
Q ss_pred cccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc-eEEeccccccccCCC
Q 042086 595 YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE-ARVSDFGIAKFLKPD 673 (784)
Q Consensus 595 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-~kl~DfG~a~~~~~~ 673 (784)
|+++|+|.++++.......+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999987665556888999999999999999999932229999999999999998886 799999999865432
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||+....... .....+.....+.....
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~-- 228 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF------RIMWAVHNGTRPPLIKN-- 228 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH------HHHHHHHTTCCCCCBTT--
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH------HHHHHHhcCCCCCcccc--
Confidence 2344689999999999999999999999999999999999999974321100 00000111111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 754 DELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+.+++.+||+.||++|||++++++.|
T Consensus 229 -~~~~l~~li~~~l~~dp~~Rps~~ell~~L 258 (307)
T 2eva_A 229 -LPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258 (307)
T ss_dssp -CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -cCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 223578899999999999999999999864
No 123
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.5e-40 Score=348.46 Aligned_cols=253 Identities=23% Similarity=0.392 Sum_probs=207.7
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..++|++.+.||+|+||.||+|... +++.||+|.+... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4567999999999999999999976 5889999998752 3346789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999976433 4588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 672 PDSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 672 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
..... .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||........ ...+........+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~ 234 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--------YELLEKDYRMERP 234 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--------HHHHHTTCCCCCC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHhccCCCCCC
Confidence 43322 234457889999999998999999999999999999999 9999874322110 0011111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
... ...+.+++.+|++.||++|||++++++.|
T Consensus 235 ~~~---~~~l~~li~~~l~~dp~~Rps~~~~~~~l 266 (288)
T 3kfa_A 235 EGC---PEKVYELMRACWQWNPSDRPSFAEIHQAF 266 (288)
T ss_dssp TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHhCCChhhCcCHHHHHHHH
Confidence 122 23578899999999999999999998864
No 124
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.6e-40 Score=368.55 Aligned_cols=250 Identities=24% Similarity=0.443 Sum_probs=199.1
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|..+++..||||+++... ...++|.+|+.++++++||||+++++++.+ +..++||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 46789999999999999999999888889999987632 246789999999999999999999999976 6789999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 258 e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 9999999999996421 12478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCCCC
Q 042086 674 SSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILD-PRLPTPPQ 750 (784)
Q Consensus 674 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~ 750 (784)
... .....+++.|+|||.+....++.++|||||||++|||++ |+.||....... ....+.. .+++.+.
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~~~~~~- 404 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------VLDQVERGYRMPCPP- 404 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCCCCCCT-
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCCC-
Confidence 221 233456789999999999999999999999999999999 999986432211 0111111 1222222
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.. ...+.+++.+||+.||++|||++++++.|
T Consensus 405 ~~---~~~l~~li~~cl~~dP~~Rpt~~~l~~~L 435 (452)
T 1fmk_A 405 EC---PESLHDLMCQCWRKEPEERPTFEYLQAFL 435 (452)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 22 23578899999999999999999998764
No 125
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.4e-40 Score=344.01 Aligned_cols=252 Identities=31% Similarity=0.487 Sum_probs=199.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC----CChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM----VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++........ ...+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367999999999999999999875 789999999876432221 11267999999999999999999999997654
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEeCCCCCCeeecCCCc-----eEE
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP--IVHRDISSKNVLLCLDYE-----ARV 661 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~-----~kl 661 (784)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 79999999999999887543 3689999999999999999999998 7 999999999999988776 999
Q ss_pred eccccccccCCCCCcccccccccccccccccc--cCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 662 SDFGIAKFLKPDSSNCTELVGTFGYIAPELVY--TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 662 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
+|||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||+........ ....
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~------~~~~ 241 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK------FINM 241 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH------HHHH
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH------HHHH
Confidence 99999985432 344567899999999984 556788999999999999999999999743221100 0000
Q ss_pred ccCCCC-CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 740 ILDPRL-PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 740 ~~d~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+..... ...+. .....+.+++.+||+.||++|||++|+++.|
T Consensus 242 ~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 284 (287)
T 4f0f_A 242 IREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284 (287)
T ss_dssp HHHSCCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhccCCCCCCCc---ccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 000111 11111 2233588999999999999999999999864
No 126
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.7e-40 Score=351.56 Aligned_cols=257 Identities=21% Similarity=0.352 Sum_probs=189.3
Q ss_pred HhcCCCCceeEecccceEEEEEEEcC-C---CEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLTS-G---EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
..++|++.+.||+|+||.||+|+... + ..||||++..... .....+++.+|++++++++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34679999999999999999998653 3 3899999875422 22335789999999999999999999999987665
Q ss_pred e------EEEEecccCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCce
Q 042086 589 S------FLVYEYLERGSLATILSNDG---AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA 659 (784)
Q Consensus 589 ~------~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 659 (784)
. ++||||+++|+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999996432 122588999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 042086 660 RVSDFGIAKFLKPDSS--NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNIS 736 (784)
Q Consensus 660 kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 736 (784)
||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... .
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~ 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--------I 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------H
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--------H
Confidence 9999999987644322 1233456788999999999999999999999999999999 999987433211 1
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 737 LNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 737 ~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+........+.. ....+.+++.+||+.||++|||+.++++.|
T Consensus 249 ~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 293 (323)
T 3qup_A 249 YNYLIGGNRLKQPPE---CMEEVYDLMYQCWSADPKQRPSFTCLRMEL 293 (323)
T ss_dssp HHHHHTTCCCCCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhcCCCCCCCCc---cCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 111111111111112 223588999999999999999999988753
No 127
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.1e-40 Score=358.65 Aligned_cols=264 Identities=19% Similarity=0.269 Sum_probs=203.0
Q ss_pred hcCCCCceeEecc--cceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceE
Q 042086 514 TNGFDVKYCIGIG--GQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 514 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 590 (784)
.++|++.+.||+| +||.||+|+.. +|+.||||++..... .....+.+.+|+.+++.++|||||++++++.+.+..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 4679999999999 99999999986 799999999976422 1223467888999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999976432 3588999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCC-------Cccccccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 042086 671 KPDS-------SNCTELVGTFGYIAPELVYT--MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEIL 741 (784)
Q Consensus 671 ~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 741 (784)
.... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...................+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 3211 11233478999999999987 57899999999999999999999999643321100000000000000
Q ss_pred CCC---------------------------CCC-------CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 742 DPR---------------------------LPT-------PPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 742 d~~---------------------------~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+.. ... ...........+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 000 00011122346889999999999999999999985
No 128
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=348.93 Aligned_cols=246 Identities=21% Similarity=0.246 Sum_probs=193.5
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 592 (784)
++|++.+.||+|+||+||+|+.. +|+.||||++....... ....++..|+..+.++ +||||+++++++.+.+..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGP-KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccCh-HHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999987 79999999986543221 2234455666666555 899999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+ +++|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 669999887643 3589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
. .......||++|+|||++.+ .++.++|||||||++|||++|..|+....... .+.....+. ...
T Consensus 210 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-----------~~~~~~~~~--~~~ 274 (311)
T 3p1a_A 210 A-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ-----------QLRQGYLPP--EFT 274 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-----------HHTTTCCCH--HHH
T ss_pred C-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----------HHhccCCCc--ccc
Confidence 3 23345579999999999876 78999999999999999999977654222110 111111100 000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.....++.+++.+||+.||++|||++|+++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 112346889999999999999999999986
No 129
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.6e-40 Score=354.26 Aligned_cols=247 Identities=25% Similarity=0.387 Sum_probs=199.8
Q ss_pred cCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
+.|+..+.||+|+||.||+|+. .+++.||||++...........+++.+|++++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4589999999999999999986 479999999987543322233467899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||++ |+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9997 58888886432 3588999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC-CCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVY---TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDP-RLPTPP 749 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~ 749 (784)
....||+.|+|||.+. ...++.++|||||||++|||++|+.||........ ...+... ......
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNESPALQS 275 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------HHHHHHSCCCCCCC
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--------HHHHHhcCCCCCCC
Confidence 3457899999999984 56789999999999999999999999864322110 0001111 111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
... ...+.+++.+||+.||++|||++++++
T Consensus 276 ~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 GHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCC---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 122 235778999999999999999999975
No 130
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.4e-40 Score=342.22 Aligned_cols=253 Identities=19% Similarity=0.312 Sum_probs=202.1
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC---CChhhHHHHHHHHhccCCCceeeEEeEEecCCceE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM---VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 590 (784)
++|++.+.||+|+||.||+|+.. +++.||+|.+........ ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56999999999999999999987 799999999876432221 23678999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC----ceEEecccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY----EARVSDFGI 666 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfG~ 666 (784)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999997543 588899999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
+....... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+......
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--------TLTNISAVNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--------HHHHhHhcccC
Confidence 98765432 2345578999999999999999999999999999999999999986432110 01111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
............+.+++.+||+.||++|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 110000111335789999999999999999999986
No 131
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.9e-40 Score=350.71 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=197.4
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCE----EEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEI----LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
++|++.+.||+|+||.||+|+.. +++. ||+|.+.... .....+.+.+|+.+++.++||||+++++++. .+..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 57999999999999999999865 4443 7888775432 2234567889999999999999999999986 4668
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 89999999999999997642 3678899999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCC--cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CC
Q 042086 670 LKPDSS--NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-RL 745 (784)
Q Consensus 670 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~ 745 (784)
+..... ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+... +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~~~~~~~~~ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--------PDLLEKGERL 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--------HHHHHTTCBC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--------HHHHHcCCCC
Confidence 754432 2345567889999999999999999999999999999999 9999974322110 0001111 11
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+ ... ...+.+++.+||+.||++|||++++++.|
T Consensus 237 ~~~-~~~---~~~~~~li~~~l~~dp~~Rps~~el~~~l 271 (325)
T 3kex_A 237 AQP-QIC---TIDVYMVMVKCWMIDENIRPTFKELANEF 271 (325)
T ss_dssp CCC-TTB---CTTTTHHHHHHTCSCTTTSCCHHHHHHHH
T ss_pred CCC-CcC---cHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111 111 12467899999999999999999999864
No 132
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=9.5e-40 Score=344.11 Aligned_cols=255 Identities=19% Similarity=0.261 Sum_probs=203.8
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+.+++.+ +|+|++++++++.+....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-----SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-----TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-----CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 45799999999999999999986 47999999998643 2345788999999999 79999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc-----eEEecccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE-----ARVSDFGI 666 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~DfG~ 666 (784)
||||+ +++|.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 899999998653 2588999999999999999999999 9999999999999987776 99999999
Q ss_pred ccccCCCCC-------cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 667 AKFLKPDSS-------NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 667 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-----~~~~~ 232 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-----QKYER 232 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-----HHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-----HHHHH
Confidence 987754322 134567999999999999999999999999999999999999999753221100 00000
Q ss_pred ccCCCCCCC-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 740 ILDPRLPTP-PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 740 ~~d~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+.......+ ..........+.+++.+||+.||++|||+++|++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l 278 (298)
T 1csn_A 233 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLF 278 (298)
T ss_dssp HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred HHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 000000000 000001123688999999999999999999998764
No 133
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-39 Score=357.29 Aligned_cols=336 Identities=21% Similarity=0.182 Sum_probs=294.0
Q ss_pred CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEE
Q 042086 75 NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVL 154 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 154 (784)
.+.+++.|++++|.++...+..|..+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..++.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46889999999999997766668999999999999999998888899999999999999999998888999999999999
Q ss_pred eecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccc
Q 042086 155 HLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLS 234 (784)
Q Consensus 155 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 234 (784)
+|++|.++...+..|.++++|++|+|++|.+++..+..+..+++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999966556679999999999999999988888899999999999999999865 3677899999999999998
Q ss_pred cccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccc
Q 042086 235 GVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETL 314 (784)
Q Consensus 235 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l 314 (784)
+. ...++|++|++++|++. .++.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+
T Consensus 200 ~~-----~~~~~L~~L~l~~n~l~--~~~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 268 (390)
T 3o6n_A 200 TL-----AIPIAVEELDASHNSIN--VVRGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF 268 (390)
T ss_dssp EE-----ECCSSCSEEECCSSCCC--EEECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred cc-----CCCCcceEEECCCCeee--ecccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHc
Confidence 53 33468999999999997 33433 347999999999999864 578999999999999999999889999
Q ss_pred cccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceE
Q 042086 315 GNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSC 394 (784)
Q Consensus 315 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 394 (784)
..+++|++|+|++|++++ ++..+..+++|+.|+|++|++. .+|..+..+++|+.|+|++|+++... +..+++|+.
T Consensus 269 ~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~ 343 (390)
T 3o6n_A 269 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKN 343 (390)
T ss_dssp TTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSE
T ss_pred cccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCE
Confidence 999999999999999998 5667788999999999999999 67878899999999999999999763 677899999
Q ss_pred EEcCCCCCcccCCCCCCCcCCCcccccCCCCCCCCC
Q 042086 395 IDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCGDI 430 (784)
Q Consensus 395 l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 430 (784)
|++++|++.|.... ..+.......+.+++..|..+
T Consensus 344 L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 344 LTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp EECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred EEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 99999999986433 233344445566777778764
No 134
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=370.18 Aligned_cols=345 Identities=25% Similarity=0.251 Sum_probs=299.4
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEee
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHL 156 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (784)
+++++|+|++|+|++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999999999999999999999999999988999999999999999999999888899999999999999
Q ss_pred cCCCcccccCCccccccccceeeccccccCC-CccccccCccCCceeeccccccCCccchhhhccccc----ceeccCCC
Q 042086 157 YGNSLSGSIPSIIGNLKSLFYLHLSSNQLSG-SIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKML----LHLGLSTN 231 (784)
Q Consensus 157 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L----~~L~L~~n 231 (784)
++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997766689999999999999999987 479999999999999999999998888899998888 78888888
Q ss_pred ccccccCC------------------------------------------------------------------------
Q 042086 232 HLSGVIPL------------------------------------------------------------------------ 239 (784)
Q Consensus 232 ~l~~~~~~------------------------------------------------------------------------ 239 (784)
.+++..+.
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 77654443
Q ss_pred ---------CCcCCCCcceEEecCCCCCCCCccccc------------------------------------------cc
Q 042086 240 ---------SIGNLNNLIGLYLYDNQLSVGEIPIEI------------------------------------------GK 268 (784)
Q Consensus 240 ---------~l~~l~~L~~L~L~~n~l~~~~~~~~l------------------------------------------~~ 268 (784)
.+..+++|+.|++++|.++ .+|..+ ..
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~--~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE--RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC--SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch--hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 3444567777777777665 333222 45
Q ss_pred ccccceEeccCccccCCC--CccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCc-hhhhcccccC
Q 042086 269 LSSLNYLVLNGNQLYGNL--PRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFP-VELEKLIQLS 345 (784)
Q Consensus 269 l~~L~~L~l~~n~l~~~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~ 345 (784)
+++|++|++++|++++.. +..+..+++|++|++++|.+++..+ .+..+++|++|++++|.+.+..+ ..+..+++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 688999999999998654 6788899999999999999996544 49999999999999999998765 5789999999
Q ss_pred eeccCCccccccccccccccccccEEecCCCccC-CCCcccccCcccceEEEcCCCCCcccCCCC-CCCcCCCcccccCC
Q 042086 346 ELDLSLNILEGKIPCEICNMESLEKLNLSHNNFS-GLIPSCFEGMHGLSCIDVSYNELRGPIPNS-RIFQYDPMEALQGN 423 (784)
Q Consensus 346 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n 423 (784)
.|++++|.+.+..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++|++++..|.. ..........+.+|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 9999999999999999999999999999999998 678999999999999999999999977753 22334444455666
Q ss_pred C
Q 042086 424 K 424 (784)
Q Consensus 424 ~ 424 (784)
.
T Consensus 505 ~ 505 (570)
T 2z63_A 505 Q 505 (570)
T ss_dssp C
T ss_pred c
Confidence 4
No 135
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-40 Score=356.69 Aligned_cols=257 Identities=24% Similarity=0.388 Sum_probs=204.6
Q ss_pred HHhcCCCCceeEecccceEEEEEEEcC------CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEe
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLTS------GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCS 584 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 584 (784)
...++|++.+.||+|+||.||+|.... ++.||+|.+.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999999999999998652 3489999987642 122356799999999999 8999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDGA-----------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL 653 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 653 (784)
+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999964321 23578899999999999999999999 99999999999999
Q ss_pred cCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccc
Q 042086 654 CLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSS 730 (784)
Q Consensus 654 ~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~ 730 (784)
+.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++|||||||++|||+| |..||.......
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 274 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--- 274 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---
Confidence 99999999999999876443222 234567889999999999899999999999999999998 999986432110
Q ss_pred cccccccccccCCCC-CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 731 SNRNISLNEILDPRL-PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 731 ~~~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.....+.... ...+... ...+.+++.+||+.||++|||+.+|++.|
T Consensus 275 -----~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 275 -----KFYKLVKDGYQMAQPAFA---PKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp -----HHHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -----HHHHHHhcCCCCCCCCCC---CHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 0001111110 0111112 23578899999999999999999999864
No 136
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.2e-40 Score=348.13 Aligned_cols=255 Identities=22% Similarity=0.406 Sum_probs=206.2
Q ss_pred hcCCCCceeEecccceEEEEEEE------cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHP 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 586 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 46799999999999999999985 257899999987542 122357799999999999 999999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 042086 587 RNSFLVYEYLERGSLATILSNDGA---------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNV 651 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 651 (784)
+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999976432 12489999999999999999999999 999999999999
Q ss_pred eecCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccc
Q 042086 652 LLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISS 728 (784)
Q Consensus 652 ll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~ 728 (784)
+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 9999999999999999877544322 234557889999999999999999999999999999999 999986432211
Q ss_pred cccccccccccccCCCCC-CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 729 SSSNRNISLNEILDPRLP-TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 729 ~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.....+..... ..+.. ....+.+++.+||+.||++|||+.|+++.|
T Consensus 256 -------~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 256 -------KFYKMIKEGFRMLSPEH---APAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp -------HHHHHHHHTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -------HHHHHhccCCCCCCccc---CCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 00011111110 11111 223578899999999999999999999864
No 137
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.2e-40 Score=350.08 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=203.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc--------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT--------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCS 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 584 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 468999999999999999999863 57789999987532 222356789999999999 8999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDGA-------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNV 651 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 651 (784)
+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999976542 13488999999999999999999999 999999999999
Q ss_pred eecCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccc
Q 042086 652 LLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISS 728 (784)
Q Consensus 652 ll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~ 728 (784)
+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 267 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 267 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-
Confidence 9999999999999999876543321 233456789999999998889999999999999999999 999986432110
Q ss_pred cccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 729 SSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 729 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+........+... ...+.+++.+||+.||++|||+.|+++.|
T Consensus 268 -------~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 268 -------LFKLLKEGHRMDKPANC---TNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp -------HHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -------HHHHHhcCCCCCCCccC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 00011111111111112 23578899999999999999999999764
No 138
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-39 Score=340.71 Aligned_cols=249 Identities=27% Similarity=0.427 Sum_probs=205.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357999999999999999999876 6889999998653222233457899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+ .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||+...... ....+.......+. ..
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~-~~ 235 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--------THRRIVNVDLKFPP-FL 235 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCCCCT-TS
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--------HHHHHhccccCCCC-cC
Confidence 2 2345678999999999999999999999999999999999999997432211 11112222222221 12
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+|++.||++|||++++++
T Consensus 236 ---~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 236 ---SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 235778999999999999999999986
No 139
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.8e-40 Score=340.56 Aligned_cols=252 Identities=21% Similarity=0.411 Sum_probs=203.5
Q ss_pred HhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
..++|++.+.||+|+||.||+|+..+++.||+|.+... ....+.+.+|+++++.++||||+++++++.+ +..++|
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 85 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC----cccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEE
Confidence 34679999999999999999999988889999998753 2346789999999999999999999999864 568999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999999996432 12588899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc-ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 673 DSSN-CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 673 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
.... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+........+.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~ 233 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--------VIQNLERGYRMVRPD 233 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCCCCCCT
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--------HHHHHhcccCCCCcc
Confidence 3221 233456788999999998889999999999999999999 999986432110 001111111111111
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.. ...+.+++.+|++.||++|||++++++.|
T Consensus 234 ~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~l 264 (279)
T 1qpc_A 234 NC---PEELYQLMRLCWKERPEDRPTFDYLRSVL 264 (279)
T ss_dssp TC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cc---cHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 22 23578899999999999999999998764
No 140
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.8e-39 Score=341.44 Aligned_cols=249 Identities=26% Similarity=0.402 Sum_probs=207.1
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.+.|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT--CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 356999999999999999999865 78999999987643 233467899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+..
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999864 3588999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||......... ..+............
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~ 243 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL--------FLIPKNNPPTLEGNY 243 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--------HHHHHSCCCCCCSSC
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH--------HHhhcCCCCCCcccc
Confidence 444445667899999999999999999999999999999999999998743221100 000001111111112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+||+.||++|||+.++++
T Consensus 244 ---~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 244 ---SKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp ---CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---CHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 235788999999999999999999986
No 141
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=345.13 Aligned_cols=265 Identities=25% Similarity=0.329 Sum_probs=200.9
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCC--CCCChhhHHHHHHHHhccC---CCceeeEEeEEecC
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPC--EMVPQPEFVNEIKTLTELR---HRSIVKFYGFCSHP 586 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 586 (784)
..++|++.+.||+|+||+||+|+.. +++.||+|++...... .......+.+|+.+++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4578999999999999999999964 7899999998643321 2223457788888887774 99999999999765
Q ss_pred C-----ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEE
Q 042086 587 R-----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARV 661 (784)
Q Consensus 587 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 661 (784)
. ..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 4789999997 599999976543 3489999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc--------ccc
Q 042086 662 SDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS--------SNR 733 (784)
Q Consensus 662 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~--------~~~ 733 (784)
+|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ...
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999876533 33456688999999999999999999999999999999999999996432211000 000
Q ss_pred ccc-----c-ccccCCCCCCC-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 734 NIS-----L-NEILDPRLPTP-PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 734 ~~~-----~-~~~~d~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
... . ...+.+..+.+ ....++....+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 0 00000000000 00001123467899999999999999999999863
No 142
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.2e-40 Score=369.20 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=208.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457999999999999999999976 7999999999765444455678899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a~~ 669 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999997653 588899999999999999999999 99999999999999 5678999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
+... .......||+.|+|||.+.+ .++.++||||+||++|+|++|+.||....... ....+.........
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~ 248 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--------ILKKVEKGKYTFEL 248 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCS
T ss_pred cccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCCCCCC
Confidence 7543 33455679999999999876 68999999999999999999999997432211 11111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 111223446889999999999999999999986
No 143
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=358.25 Aligned_cols=263 Identities=20% Similarity=0.288 Sum_probs=208.9
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC--ceEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR--NSFL 591 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 591 (784)
++|++.+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 57999999999999999999976 59999999987532 2234678899999999999999999999998755 6799
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee----cCCCceEEeccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL----CLDYEARVSDFGIA 667 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfG~a 667 (784)
||||+++|+|.++++.......+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999997654444589999999999999999999999 99999999999999 77788999999999
Q ss_pred cccCCCCCccccccccccccccccccc--------CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc----------
Q 042086 668 KFLKPDSSNCTELVGTFGYIAPELVYT--------MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS---------- 729 (784)
Q Consensus 668 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~---------- 729 (784)
+..... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 164 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 164 RELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp EECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred eEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 876543 23345679999999999865 56788999999999999999999998632211100
Q ss_pred cc-cc------ccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 730 SS-NR------NISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 730 ~~-~~------~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
.+ .. .......+....+............+.+++.+||+.||++||+++++++.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 00 00 00000011122233333446667789999999999999999999999865
No 144
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5e-39 Score=359.97 Aligned_cols=330 Identities=22% Similarity=0.192 Sum_probs=290.1
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCC-CcCccCCCcCcEEeecCCCcccccCCccccccccceee
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSI-PPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLH 179 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 179 (784)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999999999999999999999999998655 67899999999999999999988899999999999999
Q ss_pred ccccccCCCcccc--ccCccCCceeeccccccCCccchh-hhcccccceeccCCCccccccCCCCcCC--CCcceEEecC
Q 042086 180 LSSNQLSGSIPIS--LGNLSNLVVLHLFENSLFGSIPSI-LGNLKMLLHLGLSTNHLSGVIPLSIGNL--NNLIGLYLYD 254 (784)
Q Consensus 180 L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~~ 254 (784)
|++|.+++..+.. +..+++|++|+|++|.+++..|.. +.++++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866555 999999999999999999887776 8999999999999999999989888877 7999999999
Q ss_pred CCCCCCCcc-------cccccccccceEeccCccccCCCCccccC-----------------------------------
Q 042086 255 NQLSVGEIP-------IEIGKLSSLNYLVLNGNQLYGNLPRALGS----------------------------------- 292 (784)
Q Consensus 255 n~l~~~~~~-------~~l~~l~~L~~L~l~~n~l~~~~~~~l~~----------------------------------- 292 (784)
|.+...... ..+..+++|++|++++|++++..|..+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 998722110 12345689999999999987655443321
Q ss_pred ----CCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccc
Q 042086 293 ----LTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESL 368 (784)
Q Consensus 293 ----l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 368 (784)
.++|+.|++++|.+++..|..+..+++|++|+|++|++++..|..+..+++|+.|+|++|.+++..|..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 2689999999999999999999999999999999999999889999999999999999999998889999999999
Q ss_pred cEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC-CCCcCCCcccccCCCCCCCCC
Q 042086 369 EKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS-RIFQYDPMEALQGNKGLCGDI 430 (784)
Q Consensus 369 ~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 430 (784)
+.|+|++|++++..|..|..+++|++|++++|++++..+.. ..........+.+|+..|.-+
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999999999999999999999999999999844432 234455566788898887754
No 145
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=347.29 Aligned_cols=261 Identities=23% Similarity=0.338 Sum_probs=197.8
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 57999999999999999999976 699999999865422 1222466889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++++|.++++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999999887543 478899999999999999999999 9999999999999999999999999999887655
Q ss_pred CCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccc------------cccccc
Q 042086 674 SSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRN------------ISLNEI 740 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~------------~~~~~~ 740 (784)
........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.............. ......
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 544556689999999999976 5679999999999999999999999964332110000000 000000
Q ss_pred -cCCCCCCCCCC------CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 741 -LDPRLPTPPQN------VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 741 -~d~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.....+.+... .+.....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00011111000 0112335789999999999999999999986
No 146
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-40 Score=355.39 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=189.9
Q ss_pred CCCCceeEecccceEEEEEEEc--CC--CEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec-CCceE
Q 042086 516 GFDVKYCIGIGGQGSVYKAKLT--SG--EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH-PRNSF 590 (784)
Q Consensus 516 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 590 (784)
.|++.+.||+|+||.||+|+.. ++ ..||||.+.... .....++|.+|+.++++++||||+++++++.+ ++..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4677899999999999999864 22 468999886532 23345789999999999999999999998754 56789
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++|+|.++++... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 168 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999997643 3578899999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC----cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 042086 671 KPDSS----NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 671 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
..... ......+|+.|+|||.+.+..++.++|||||||++|||+| |.+||....... ....+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--------~~~~~~~~~~ 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQGRR 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--------HHHHHHTTCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--------HHHHHHcCCC
Confidence 43221 1233457789999999999999999999999999999999 677776432211 0111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+...+ ..+.+++.+||+.||++|||++|+++.|
T Consensus 315 ~~~p~~~~---~~l~~li~~cl~~dp~~RPs~~ell~~L 350 (373)
T 3c1x_A 315 LLQPEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRI 350 (373)
T ss_dssp CCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCC---HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11122222 3578899999999999999999999864
No 147
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.5e-40 Score=339.34 Aligned_cols=249 Identities=19% Similarity=0.315 Sum_probs=200.6
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC--CceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP--RNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 591 (784)
.++|++.+.||+|+||.||+|+.+ ++.||||++..... .....+.|.+|+.++++++||||+++++++.+. ...++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 357999999999999999999986 88999999876422 222346799999999999999999999999877 78899
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP--IVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
||||+++|+|.++++.... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 9999999999999986432 3589999999999999999999998 7 99999999999999999999999998765
Q ss_pred cCCCCCcccccccccccccccccccCCcCc---chhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc-CCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTE---KCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEIL-DPRL 745 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-d~~~ 745 (784)
... ....||+.|+|||.+.+..++. ++|||||||++|||++|+.||........ ...+. ....
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~ 229 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--------GMKVALEGLR 229 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--------HHHHHHSCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--------HHHHHhcCCC
Confidence 332 3346899999999998765554 79999999999999999999974332110 00010 1111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+... ...+.+++.+||+.||++|||++++++.|
T Consensus 230 ~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~~il~~L 265 (271)
T 3kmu_A 230 PTIPPGI---SPHVSKLMKICMNEDPAKRPKFDMIVPIL 265 (271)
T ss_dssp CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111122 23578899999999999999999999864
No 148
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=351.26 Aligned_cols=260 Identities=19% Similarity=0.256 Sum_probs=193.4
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||+||+|+.. +++.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57999999999999999999976 789999999875432 122334568999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++ +|.+++...+. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLDK-DLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccccc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 99985 99999876543 588899999999999999999999 9999999999999999999999999999876554
Q ss_pred CCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccccccccc----
Q 042086 674 SSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-------SSNRNISLNEIL---- 741 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~---- 741 (784)
........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... ............
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 444556678999999999876 56899999999999999999999999643211000 000000000000
Q ss_pred --CCCCCCCC-C----CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 742 --DPRLPTPP-Q----NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 742 --d~~~~~~~-~----~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....+... . ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 0 00111235789999999999999999999986
No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.1e-40 Score=347.67 Aligned_cols=260 Identities=23% Similarity=0.337 Sum_probs=194.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|... +|+.||+|++...........+++.+|+.+++.++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 357999999999999999999874 7999999998764333333456799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 593 YEYLERGSLATILSNDG-AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
|||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986421 123578899999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
..........|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ......+.....+...
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~-- 259 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEQCDYPPLP-- 259 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH------HHHHHHHHTTCSCCCC--
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH------HHHHHHhhcccCCCCc--
Confidence 54444455678999999999999999999999999999999999999986321100 0000111111111110
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
......++.+++.+||+.||++|||+++|++.|
T Consensus 260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l 292 (310)
T 2wqm_A 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVA 292 (310)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 011223578899999999999999999999764
No 150
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.2e-40 Score=345.46 Aligned_cols=255 Identities=26% Similarity=0.398 Sum_probs=202.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe--cCCceE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS--HPRNSF 590 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 590 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+.+|+.++++++||||+++++++. .....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 357999999999999999999876 789999999875422 2223567999999999999999999999874 456789
Q ss_pred EEEecccCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEEeCCCCCCeeecCCCceEEecc
Q 042086 591 LVYEYLERGSLATILSNDG-AIEEFNWTVRMNVIRSVANALSYMHHDCFPP-----IVHRDISSKNVLLCLDYEARVSDF 664 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~Dlk~~Nill~~~~~~kl~Df 664 (784)
+||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997532 123589999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPR 744 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~ 744 (784)
|+++.............|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~i~~~~ 232 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--------LAGKIREGK 232 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--------HHHHHhhcc
Confidence 999876544333345678999999999999899999999999999999999999987432210 011111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
....+... ..++.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 233 FRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp CCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccCCccc---CHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 11111122 2357889999999999999999999975
No 151
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-39 Score=344.05 Aligned_cols=259 Identities=23% Similarity=0.351 Sum_probs=202.3
Q ss_pred cCCCCceeEecccceEEEEEEE-----cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC--C
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP--R 587 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 587 (784)
..|++.+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 4589999999999999999983 368999999997643 334567899999999999999999999999876 6
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 6899999999999999996543 3588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccc-------cccccccccc
Q 042086 668 KFLKPDSS---NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSIS-------SSSSNRNISL 737 (784)
Q Consensus 668 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~-------~~~~~~~~~~ 737 (784)
..+..... ......+|..|+|||.+.+..++.++||||||+++|||++|..|+....... ..........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 88765432 2234567888999999999999999999999999999999999864321100 0000000000
Q ss_pred ccccCC-CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 738 NEILDP-RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 738 ~~~~d~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+... +...+ . .....+.+++.+||+.||++|||++++++.|
T Consensus 254 ~~~~~~~~~~~~-~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 297 (302)
T 4e5w_A 254 NTLKEGKRLPCP-P---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGF 297 (302)
T ss_dssp HHHHTTCCCCCC-T---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHhccCCCCCC-C---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 111111 11111 1 2223688999999999999999999999864
No 152
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=351.34 Aligned_cols=250 Identities=24% Similarity=0.375 Sum_probs=196.1
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCC--CceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH--RSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l 591 (784)
.+.|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.+++.++| |||+++++++.++...++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 356999999999999999999998999999999875422 22234678999999999976 999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||| +.+|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.+.
T Consensus 87 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 56779999998653 578899999999999999999999 999999999999997 6789999999998765
Q ss_pred CCCC--ccccccccccccccccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042086 672 PDSS--NCTELVGTFGYIAPELVYT-----------MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLN 738 (784)
Q Consensus 672 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 738 (784)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-------HHHHH
Confidence 4332 2345679999999999865 67889999999999999999999999642210 01112
Q ss_pred cccCCCCCC-CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 739 EILDPRLPT-PPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 739 ~~~d~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.++++.... .+... ...+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 232 AIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcccCCcccC---CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 222222111 11111 235778999999999999999999986
No 153
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-40 Score=354.43 Aligned_cols=260 Identities=21% Similarity=0.382 Sum_probs=207.6
Q ss_pred HHHHHhcCCCCceeEecccceEEEEEEEc------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeE
Q 042086 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLT------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGF 582 (784)
Q Consensus 509 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 582 (784)
++....++|++.+.||+|+||.||+|+.. +++.||+|.+.... ......++.+|+.+++.++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 33445678999999999999999999764 47889999987532 22234578999999999999999999999
Q ss_pred EecCCceEEEEecccCCCHHHHHhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC
Q 042086 583 CSHPRNSFLVYEYLERGSLATILSNDG-------AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655 (784)
Q Consensus 583 ~~~~~~~~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 655 (784)
+.+.+..++||||+++|+|.++++... ....+++..+.+++.|++.||+|||++ +|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcC
Confidence 999999999999999999999996422 224578899999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 042086 656 DYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSN 732 (784)
Q Consensus 656 ~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~ 732 (784)
++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------ 247 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------ 247 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------
Confidence 999999999999865433221 233456889999999999899999999999999999999 89998643221
Q ss_pred cccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 733 RNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 733 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.....+........+... ...+.+++.+||+.||++|||+.|+++.|
T Consensus 248 --~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~e~l~~L 294 (322)
T 1p4o_A 248 --QVLRFVMEGGLLDKPDNC---PDMLFELMRMCWQYNPKMRPSFLEIISSI 294 (322)
T ss_dssp --HHHHHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHcCCcCCCCCCC---CHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 111111122222112222 23578899999999999999999999864
No 154
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=346.52 Aligned_cols=251 Identities=22% Similarity=0.383 Sum_probs=195.1
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCE----EEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEI----LAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
.++|++.+.||+|+||.||+|+.. +++. ||+|.+.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 357999999999999999999865 4543 5777775432 3345678999999999999999999999998754
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999997653 3588899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042086 669 FLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-R 744 (784)
Q Consensus 669 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~ 744 (784)
.+...... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||+...... ....+... .
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~~~~~~~~~~ 237 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------ISSILEKGER 237 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCC
Confidence 76543222 233456788999999999999999999999999999999 999997432211 00111111 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+.+ .. ....+.+++.+||+.||++|||+.|+++.|
T Consensus 238 ~~~~-~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L 273 (327)
T 3lzb_A 238 LPQP-PI---CTIDVYMIMRKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp CCCC-TT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC-cc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 1111 11 223578899999999999999999999864
No 155
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=351.16 Aligned_cols=266 Identities=21% Similarity=0.259 Sum_probs=198.9
Q ss_pred HHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCC--CCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCE--MVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
...++|++.+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999976 68999999987543221 1123578899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999987 8999887543 3577888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------ccccc--ccc
Q 042086 669 FLKPDSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS--------SSNRN--ISL 737 (784)
Q Consensus 669 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~--------~~~~~--~~~ 737 (784)
.+...........||+.|+|||.+.+. .++.++|||||||++|||++|..||......... ..... ...
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 876555555667899999999999764 4788999999999999999999998643221100 00000 000
Q ss_pred ccccCCC-CCCCCCCC-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 738 NEILDPR-LPTPPQNV-----QDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 738 ~~~~d~~-~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
....+.. ....+... ......+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000 00000000 1123468899999999999999999999863
No 156
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.5e-40 Score=348.33 Aligned_cols=257 Identities=22% Similarity=0.328 Sum_probs=195.6
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++++++||||+++++++.+++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999976 789999999876433222234679999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999997643 588899999999999999999999 99999999999999999999999999998765
Q ss_pred CCC-CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 672 PDS-SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 672 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+......+..
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~ 256 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---------MGAHINQAIPRPST 256 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---------HHHHHHSCCCCGGG
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---------HHHHhccCCCCccc
Confidence 432 22345578999999999999999999999999999999999999997432110 00000011110000
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHhC
Q 042086 751 NVQDELISIVEVAFLCLNESPESRP-PMHTVCQLL 784 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RP-s~~~vl~~L 784 (784)
........+.+++.+||+.||++|| +++++++.|
T Consensus 257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l 291 (309)
T 2h34_A 257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAA 291 (309)
T ss_dssp TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHH
Confidence 0111223578899999999999999 999998753
No 157
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.7e-40 Score=361.00 Aligned_cols=256 Identities=22% Similarity=0.300 Sum_probs=193.2
Q ss_pred HHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCC-----CCCChhhHHHHHHHHhccCCCceeeEEeEEec
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPC-----EMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH 585 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 585 (784)
...++|.+.+.||+|+||.||+|... +++.||||++...... .......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999876 6899999998653211 12233468999999999999999999999865
Q ss_pred CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC---CceEEe
Q 042086 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD---YEARVS 662 (784)
Q Consensus 586 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~ 662 (784)
+..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 55789999999999999886543 588999999999999999999999 99999999999999754 459999
Q ss_pred ccccccccCCCCCccccccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 663 DFGIAKFLKPDSSNCTELVGTFGYIAPELVYT---MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 663 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-------~~~~~ 356 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-------SLKDQ 356 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-------CHHHH
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-------HHHHH
Confidence 99999876532 33345689999999999863 567889999999999999999999996322110 00011
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 740 ILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 740 ~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+........+.........+.+++.+||+.||++|||++|+++
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111111111111112346889999999999999999999986
No 158
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.3e-39 Score=355.69 Aligned_cols=249 Identities=24% Similarity=0.383 Sum_probs=197.2
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC--CCceeeEEeEEecCCceEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR--HRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 592 (784)
..|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.+++.++ ||||+++++++...+..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45999999999999999999988899999999875422 2223567999999999996 59999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+..
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 56789999998654 578889999999999999999999 999999999999995 68999999999987654
Q ss_pred CCC--ccccccccccccccccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 673 DSS--NCTELVGTFGYIAPELVYT-----------MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 673 ~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~ 279 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA 279 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHH
Confidence 332 2345679999999999865 3688899999999999999999999963221 0111222
Q ss_pred ccCCCCCCC-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 740 ILDPRLPTP-PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 740 ~~d~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
++++..... +... ...+.+++.+||+.||++|||+.|+++
T Consensus 280 ~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 280 IIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCccccCCCCccc---hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 333222111 1111 235788999999999999999999986
No 159
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-39 Score=341.06 Aligned_cols=253 Identities=26% Similarity=0.378 Sum_probs=197.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 357999999999999999999875 68999999987643 233467899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEecccccc
Q 042086 593 YEYLERGSLATILSNDG-AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAK 668 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a~ 668 (784)
|||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999885421 123588899999999999999999999 99999999999999 455789999999998
Q ss_pred ccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 669 FLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 669 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
.+... .......||+.|+|||.+. ..++.++||||||+++|||++|+.||.......... . .....+.....
T Consensus 176 ~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~---~---~~~~~~~~~~~ 247 (285)
T 3is5_A 176 LFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ---K---ATYKEPNYAVE 247 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---H---HHHCCCCCCC-
T ss_pred ecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh---h---hccCCcccccc
Confidence 76543 2334567899999999885 468899999999999999999999997432111000 0 00001111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
... ....+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 CRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011 1235778999999999999999999986
No 160
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.1e-39 Score=367.72 Aligned_cols=354 Identities=21% Similarity=0.171 Sum_probs=267.9
Q ss_pred EEEEeCCCcccC----CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccC
Q 042086 63 ISINLSTVGLKG----NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLS 138 (784)
Q Consensus 63 ~~l~l~~~~~~~----~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 138 (784)
..+++.+.++.. -.++|++|+|++|+|++..|..|.++++|++|+|++|++++..|.+|+++++|++|+|++|+++
T Consensus 34 ~~l~ls~~~L~~ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 113 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ 113 (562)
T ss_dssp CEEECTTSCCCSCCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred cEEEcCCCCCccCCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC
Confidence 445555554432 2367999999999999888889999999999999999999988999999999999999999998
Q ss_pred CCCCcCccCCCcCcEEeecCCCcccc-cCCccccccccceeeccccccCCCccccccCccCC--ceeecccccc--CCcc
Q 042086 139 GSIPPTLGNLSNLAVLHLYGNSLSGS-IPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNL--VVLHLFENSL--FGSI 213 (784)
Q Consensus 139 ~~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~ 213 (784)
.+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|.+++. .+..+++| +.|++++|.+ ++..
T Consensus 114 -~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~ 187 (562)
T 3a79_B 114 -NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGE 187 (562)
T ss_dssp -EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSS
T ss_pred -ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccC
Confidence 56665 799999999999999863 467899999999999999998853 34555555 9999999888 6655
Q ss_pred chhhhccc------------------------------------------------------------------------
Q 042086 214 PSILGNLK------------------------------------------------------------------------ 221 (784)
Q Consensus 214 ~~~l~~l~------------------------------------------------------------------------ 221 (784)
|..+..+.
T Consensus 188 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~ 267 (562)
T 3a79_B 188 TESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSV 267 (562)
T ss_dssp CCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHH
T ss_pred cccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHH
Confidence 55554422
Q ss_pred ---------ccceeccCCCccccccCCCC-----cCCC--------------------------CcceEEecCCCCCCCC
Q 042086 222 ---------MLLHLGLSTNHLSGVIPLSI-----GNLN--------------------------NLIGLYLYDNQLSVGE 261 (784)
Q Consensus 222 ---------~L~~L~L~~n~l~~~~~~~l-----~~l~--------------------------~L~~L~L~~n~l~~~~ 261 (784)
+|++|++++|.+++.+|..+ ..++ +|+.|++++|.+....
T Consensus 268 ~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~ 347 (562)
T 3a79_B 268 KLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV 347 (562)
T ss_dssp HHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC
T ss_pred HHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc
Confidence 67777777777777777655 3332 3555555555543111
Q ss_pred cccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCC--CcccccccccceEEecccccccCCCc-hhh
Q 042086 262 IPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNS--IPETLGNLLKLHYLNLSNNQFRKGFP-VEL 338 (784)
Q Consensus 262 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~--~~~~l~~l~~L~~L~ls~N~l~~~~~-~~~ 338 (784)
....+++|++|++++|++++..|..+..+++|+.|++++|++++. +|..+.++++|++|++++|++++.+| ..+
T Consensus 348 ---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 424 (562)
T 3a79_B 348 ---CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC 424 (562)
T ss_dssp ---CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCC
T ss_pred ---CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhh
Confidence 115678888888888888887888888888888888888888863 34668888888888888888887444 457
Q ss_pred hcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC--CCCcCCC
Q 042086 339 EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS--RIFQYDP 416 (784)
Q Consensus 339 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~~~~ 416 (784)
..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|++++ +|.. ..+....
T Consensus 425 ~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~ 500 (562)
T 3a79_B 425 AWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQ 500 (562)
T ss_dssp CCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCC
T ss_pred cCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCC
Confidence 7888888888888888877776554 68888888888888 456655688888888888888884 5553 2334444
Q ss_pred cccccCCCCCCCC
Q 042086 417 MEALQGNKGLCGD 429 (784)
Q Consensus 417 ~~~~~~n~~~c~~ 429 (784)
...+.+|++.|.-
T Consensus 501 ~L~l~~N~~~c~c 513 (562)
T 3a79_B 501 YIWLHDNPWDCTC 513 (562)
T ss_dssp CEECCSCCBCCCH
T ss_pred EEEecCCCcCCCc
Confidence 5567788877753
No 161
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.1e-39 Score=342.49 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=201.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 457999999999999999999976 79999999987542 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a~~ 669 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999999987543 478899999999999999999999 99999999999999 7789999999999976
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.......+.
T Consensus 159 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~i~~~~~~~~~ 228 (304)
T 2jam_A 159 EQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--------LFEKIKEGYYEFES 228 (304)
T ss_dssp CCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHCCCCCCT
T ss_pred cCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCCCCCc
Confidence 432 22344578999999999999999999999999999999999999986422110 00111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+|++.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111122346889999999999999999999986
No 162
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3e-40 Score=359.83 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=192.3
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHH---HHHhccCCCceeeEE-------eE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEI---KTLTELRHRSIVKFY-------GF 582 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 582 (784)
.++|++.+.||+|+||.||+|+. .+|+.||||++...........+.|.+|+ ++++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35788999999999999999996 47999999999765444444567899999 555566899999998 66
Q ss_pred EecCC-----------------ceEEEEecccCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 042086 583 CSHPR-----------------NSFLVYEYLERGSLATILSNDGA----IEEFNWTVRMNVIRSVANALSYMHHDCFPPI 641 (784)
Q Consensus 583 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 641 (784)
+.+++ ..++||||+ +|+|.+++...+. ...+++..+..++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 278999999 6799999975321 12345688889999999999999999 99
Q ss_pred EEeCCCCCCeeecCCCceEEeccccccccCCCCCcccccccccccccccccccC-----------CcCcchhHHHHHHHH
Q 042086 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM-----------KVTEKCDVYSFGVLA 710 (784)
Q Consensus 642 vH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslGv~l 710 (784)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998643 23345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 711 LEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 711 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
|||++|+.||....... ....+.. .. ... ...+.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~--------~~~~~~~-~~----~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALG--------GSEWIFR-SC----KNI---PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------C--------CSGGGGS-SC----CCC---CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCccccccc--------chhhhhh-hc----cCC---CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999986432211 1111111 11 111 235788999999999999999999986
No 163
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=338.56 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=201.0
Q ss_pred cCCCCce-eEecccceEEEEEEEc---CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceE
Q 042086 515 NGFDVKY-CIGIGGQGSVYKAKLT---SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 515 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 590 (784)
++|.+.+ .||+|+||.||+|... +++.||||++.... .....+++.+|+++++.++||||+++++++. .+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcE
Confidence 4566666 8999999999999854 67889999987642 2234567999999999999999999999994 56789
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999996543 3588999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 042086 671 KPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 671 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
...... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~i~~~~~~ 232 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------VMAFIEQGKRM 232 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--------HHHHHHTTCCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHhcCCcC
Confidence 543322 223456889999999998889999999999999999998 999987432211 00111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+.. ....+.+++..||+.||++||++.++++.|
T Consensus 233 ~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 267 (287)
T 1u59_A 233 ECPPE---CPPELYALMSDCWIYKWEDRPDFLTVEQRM 267 (287)
T ss_dssp CCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CCCCC---cCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11112 233688899999999999999999999864
No 164
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=9.6e-40 Score=342.50 Aligned_cols=246 Identities=21% Similarity=0.390 Sum_probs=197.3
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CC-------CEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SG-------EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH 585 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 585 (784)
.++|++.+.||+|+||.||+|+.. ++ +.||+|.+... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 357899999999999999999865 33 57999998653 23346789999999999999999999999999
Q ss_pred CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc-------
Q 042086 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE------- 658 (784)
Q Consensus 586 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~------- 658 (784)
++..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999997653 2488899999999999999999999 9999999999999998887
Q ss_pred -eEEeccccccccCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCC-CCCcccccccccccccc
Q 042086 659 -ARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDH-PRDFISSISSSSSNRNI 735 (784)
Q Consensus 659 -~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~-p~~~~~~~~~~~~~~~~ 735 (784)
+||+|||++..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|.. |+.......
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-------- 226 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-------- 226 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH--------
Confidence 99999999975432 234568899999999987 678999999999999999999554 443221110
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 736 SLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 736 ~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...........+... ..++.+++.+||+.||++|||++++++.|
T Consensus 227 -~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 227 -KLQFYEDRHQLPAPK----AAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp -HHHHHHTTCCCCCCS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred -HHHHhhccCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 000000111111111 12477899999999999999999999864
No 165
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.6e-39 Score=352.22 Aligned_cols=198 Identities=24% Similarity=0.298 Sum_probs=175.0
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-----CCceeeEEeEEecC
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-----HRSIVKFYGFCSHP 586 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~ 586 (784)
..++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+..|+.+++.++ ||||+++++++...
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~ 108 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY 108 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence 4578999999999999999999975 7899999998642 223466888999999986 99999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC-----------
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL----------- 655 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~----------- 655 (784)
+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 109 ~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 109 DHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp TEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred CeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchh
Confidence 9999999999 8899999976542 3588999999999999999999999 9999999999999975
Q ss_pred --------------CCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCC
Q 042086 656 --------------DYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRD 721 (784)
Q Consensus 656 --------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~ 721 (784)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 788999999999865432 245678999999999999999999999999999999999999996
Q ss_pred c
Q 042086 722 F 722 (784)
Q Consensus 722 ~ 722 (784)
.
T Consensus 261 ~ 261 (360)
T 3llt_A 261 T 261 (360)
T ss_dssp C
T ss_pred C
Confidence 4
No 166
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=339.57 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=198.9
Q ss_pred CCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEEe
Q 042086 516 GFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYE 594 (784)
Q Consensus 516 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 594 (784)
+|.....||+|+||.||+|+.. +++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 4555669999999999999975 6899999998754 23345789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC-CCceEEeccccccccCCC
Q 042086 595 YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL-DYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 595 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~~~~~ 673 (784)
|+++++|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999998754444567888999999999999999999 9999999999999987 899999999999877544
Q ss_pred CCcccccccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMK--VTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
........|++.|+|||.+.+.. ++.++||||||+++|||++|+.||.......... ... ......+.. +..
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~-~~~~~~~~~---~~~ 250 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FKV-GMFKVHPEI---PES 250 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HHH-HHHCCCCCC---CTT
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hhh-ccccccccc---ccc
Confidence 43445567899999999997653 7889999999999999999999986432111000 000 000011111 111
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...++.+++.+||+.||++|||+.++++
T Consensus 251 ---~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 251 ---MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ---SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2235788999999999999999999986
No 167
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.2e-39 Score=376.80 Aligned_cols=252 Identities=20% Similarity=0.275 Sum_probs=210.6
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 590 (784)
..++|++.+.||+|+||.||+|+.. +++.||||++...........+.+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3568999999999999999999876 6889999998754322334567788999999988 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+||||+++|+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998653 588899999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQ 750 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 750 (784)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......++......+..
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 564 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPKS 564 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSCCCCCTT
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCcc
Confidence 5455556677899999999999999999999999999999999999999974221 12222333333333222
Q ss_pred CCHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 042086 751 NVQDELISIVEVAFLCLNESPESRPPM-----HTVCQ 782 (784)
Q Consensus 751 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~~vl~ 782 (784)
...++.+++.+||+.||++||++ +||++
T Consensus 565 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 565 ----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ----SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ----CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 23357889999999999999997 77764
No 168
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.4e-41 Score=353.45 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=184.5
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhc--cCCCceeeEEeEEecCC----c
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTE--LRHRSIVKFYGFCSHPR----N 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 588 (784)
++|++.+.||+|+||.||+|+.+ ++.||||++... ....+.+|.+++.. ++||||+++++++.+.. .
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 57999999999999999999875 899999998642 35678889998887 79999999999998766 7
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEeCCCCCCeeecCCCceE
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH--------HDCFPPIVHRDISSKNVLLCLDYEAR 660 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~k 660 (784)
.++||||+++|+|.++++.. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred eEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 89999999999999999754 4677888999999999999999 77 999999999999999999999
Q ss_pred EeccccccccCCCCCc----ccccccccccccccccccC------CcCcchhHHHHHHHHHHHHhC----------CCCC
Q 042086 661 VSDFGIAKFLKPDSSN----CTELVGTFGYIAPELVYTM------KVTEKCDVYSFGVLALEVIKG----------DHPR 720 (784)
Q Consensus 661 l~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslGv~l~elltg----------~~p~ 720 (784)
|+|||+++........ .....||+.|+|||.+.+. .++.++|||||||++|||++| +.||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 9999999876543322 2334799999999999766 445689999999999999999 4454
Q ss_pred CccccccccccccccccccccCCCCCCCCC---CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 721 DFISSISSSSSNRNISLNEILDPRLPTPPQ---NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....... .........+.......... ...+....+.+++.+||+.||++|||+++|++.|
T Consensus 229 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 292 (303)
T 3gxj_A 229 YDLVPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp TTTCC-C---CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred cccCCCC---ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 3211100 00111111111111111111 1125566799999999999999999999999864
No 169
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.2e-39 Score=344.02 Aligned_cols=262 Identities=20% Similarity=0.264 Sum_probs=193.4
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3568999999999999999999865 789999999975432 22234567899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec-----CCCceEEecccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC-----LDYEARVSDFGI 666 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-----~~~~~kl~DfG~ 666 (784)
||||+++ +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 111 v~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9999985 9999997654 478899999999999999999999 999999999999994 455699999999
Q ss_pred ccccCCCCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCccccccccc--------cc--ccc
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS--------SN--RNI 735 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~--------~~--~~~ 735 (784)
++.............||+.|+|||.+.+. .++.++|||||||++|||++|+.||.......... .. ...
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 98876554555666789999999999875 48999999999999999999999996432211000 00 000
Q ss_pred cccc--ccCCCCCCCCCCCHH------HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 736 SLNE--ILDPRLPTPPQNVQD------ELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 736 ~~~~--~~d~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.... ......+........ ...++.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 000001100000001 1246789999999999999999999986
No 170
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=344.69 Aligned_cols=259 Identities=25% Similarity=0.372 Sum_probs=197.1
Q ss_pred HHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc--CCCceeeEEeEEecC--
Q 042086 511 VRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL--RHRSIVKFYGFCSHP-- 586 (784)
Q Consensus 511 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~-- 586 (784)
....++|++.+.||+|+||.||+|+.+ ++.||||++... ....+..|.+++... +||||+++++++.+.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 344578999999999999999999986 899999998542 244566676666655 899999999999876
Q ss_pred --CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEEeCCCCCCeeecCCCce
Q 042086 587 --RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC-----FPPIVHRDISSKNVLLCLDYEA 659 (784)
Q Consensus 587 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~Dlk~~Nill~~~~~~ 659 (784)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||++. .++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6789999999999999999754 4888999999999999999999762 3489999999999999999999
Q ss_pred EEeccccccccCCCCCc----ccccccccccccccccccCCcCcc------hhHHHHHHHHHHHHhCCC----------C
Q 042086 660 RVSDFGIAKFLKPDSSN----CTELVGTFGYIAPELVYTMKVTEK------CDVYSFGVLALEVIKGDH----------P 719 (784)
Q Consensus 660 kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslGv~l~elltg~~----------p 719 (784)
||+|||+++.+...... .....||+.|+|||.+.+...+.+ +|||||||++|||+||.. |
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999876543322 124579999999999987766654 999999999999999944 4
Q ss_pred CCccccccccccccccccccccC-CCCCC-CCC--CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 720 RDFISSISSSSSNRNISLNEILD-PRLPT-PPQ--NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~d-~~~~~-~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
|........ ......+.+. ..... .+. ...+...++.+++.+||+.||++|||+.+|++.|
T Consensus 262 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 326 (337)
T 3mdy_A 262 YHDLVPSDP----SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326 (337)
T ss_dssp TTTTSCSSC----CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HhhhcCCCC----chhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence 432111100 0000011111 11111 111 1125567799999999999999999999999864
No 171
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-39 Score=337.06 Aligned_cols=249 Identities=23% Similarity=0.376 Sum_probs=196.5
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +|+.||||.+...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57999999999999999999986 79999999986543223345678999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++++|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred eccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999997643 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNV 752 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 752 (784)
.......+++.|+|||.+.+..+ +.++||||||+++|||++|+.||+...... ....+.......+ ...
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~-~~~ 234 (276)
T 2h6d_A 165 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--------LFKKIRGGVFYIP-EYL 234 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCC-TTS
T ss_pred -cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--------HHHHhhcCcccCc-hhc
Confidence 22345578999999999987765 579999999999999999999986422110 0111111111111 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 753 QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 753 ~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+++.+|++.||++|||+.|+++
T Consensus 235 ---~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 235 ---NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 235778999999999999999999986
No 172
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-39 Score=345.80 Aligned_cols=251 Identities=27% Similarity=0.475 Sum_probs=196.2
Q ss_pred cCCCCceeEecccceEEEEEEEcC-----CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTS-----GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.+|++.+.||+|+||.||+|+... +..||||.+.... ......++.+|+.+++.++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 467888999999999999998652 3469999987532 222355789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999997643 3688999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042086 670 LKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-R 744 (784)
Q Consensus 670 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~ 744 (784)
....... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+.+. +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--------EVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHCCCc
Confidence 6543221 223346788999999999999999999999999999999 99998643211 011111111 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+.+ .. ....+.+++.+||+.||++||++.++++.|
T Consensus 269 ~~~~-~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 304 (333)
T 1mqb_A 269 LPTP-MD---CPSAIYQLMMQCWQQERARRPKFADIVSIL 304 (333)
T ss_dssp CCCC-TT---CBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCc-cc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111 12 223578899999999999999999998764
No 173
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-39 Score=350.99 Aligned_cols=261 Identities=24% Similarity=0.361 Sum_probs=207.0
Q ss_pred HHHHHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC-----CChhhHHHHHHHHhcc-CCCceeeE
Q 042086 507 YEEIVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM-----VPQPEFVNEIKTLTEL-RHRSIVKF 579 (784)
Q Consensus 507 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l 579 (784)
+.......++|++.+.||+|+||.||+|+.. +|+.||||++........ ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444555678999999999999999999986 799999999875421110 1135688999999999 89999999
Q ss_pred EeEEecCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCce
Q 042086 580 YGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA 659 (784)
Q Consensus 580 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 659 (784)
++++......++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 99999999999999999999999999754 3588899999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCccccccccccccccccccc------CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccc
Q 042086 660 RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT------MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNR 733 (784)
Q Consensus 660 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~ 733 (784)
||+|||++..+... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 240 kl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------ 312 (365)
T 2y7j_A 240 RLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------ 312 (365)
T ss_dssp EECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------
T ss_pred EEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------
Confidence 99999999877643 23355689999999999863 357889999999999999999999986322110
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 734 NISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 734 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....+..................+.+++.+||+.||++|||+.++++
T Consensus 313 --~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 313 --MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --HHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --HHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111111111100000011235889999999999999999999986
No 174
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-39 Score=341.27 Aligned_cols=256 Identities=26% Similarity=0.417 Sum_probs=190.8
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.++|++.+.||+|+||.||+|+... .||+|++..... .....+.|.+|+.+++.++||||+++++++ .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 5689999999999999999998653 599999875432 222346799999999999999999999976 456789999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999996543 3688999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCcccccccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042086 674 --SSNCTELVGTFGYIAPELVY---TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTP 748 (784)
Q Consensus 674 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 748 (784)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||......... ..........+.....
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 250 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IEMVGRGSLSPDLSKV 250 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH---HHHHHHTSCCCCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH---HHHhcccccCcchhhc
Confidence 22234467899999999986 667888999999999999999999999743221100 0000000111111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 749 PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 749 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
. ......+.+++.+||+.||++|||++++++.|
T Consensus 251 ~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L 283 (289)
T 3og7_A 251 R---SNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283 (289)
T ss_dssp C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred c---ccCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 1 12234688999999999999999999999864
No 175
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=370.83 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=197.0
Q ss_pred CCCCce-eEecccceEEEEEEEc---CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 516 GFDVKY-CIGIGGQGSVYKAKLT---SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 516 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
.+.+.+ .||+|+||.||+|.+. ++..||||+++... .....++|.+|++++++++|||||++++++.. +..++
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 344444 7999999999999864 46789999997642 33456889999999999999999999999976 56899
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 413 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 999999999999997543 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCC
Q 042086 672 PDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-RLP 746 (784)
Q Consensus 672 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~~ 746 (784)
..... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+... ++.
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------~~~~i~~~~~~~ 559 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------VMAFIEQGKRME 559 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--------HHHHHHTTCCCC
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCCCC
Confidence 43221 122345689999999999999999999999999999998 999997433211 11111111 122
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+ ... ..++.+++..||+.||++||++.+|++.|
T Consensus 560 ~p-~~~---~~~l~~li~~cl~~dP~~RPs~~~l~~~L 593 (613)
T 2ozo_A 560 CP-PEC---PPELYALMSDCWIYKWEDRPDFLTVEQRM 593 (613)
T ss_dssp CC-TTC---CHHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred CC-CcC---CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 22 222 23578899999999999999999998764
No 176
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9e-39 Score=377.36 Aligned_cols=339 Identities=21% Similarity=0.273 Sum_probs=294.1
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEc-cCCccccc---------------------------------------
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYL-YRNSLSAS--------------------------------------- 116 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L-~~n~l~~~--------------------------------------- 116 (784)
..++.|+|++|+++|.+|+.|++|++|++|+| ++|.++|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 47999999999999999999999999999999 77765544
Q ss_pred -------------------------------------CCCCCCCCCCCCEEEccCCccCC-----------------CCC
Q 042086 117 -------------------------------------IPPVIGNLKFLYHLDLSENQLSG-----------------SIP 142 (784)
Q Consensus 117 -------------------------------------~p~~l~~l~~L~~L~L~~n~l~~-----------------~~p 142 (784)
+|..|+++++|++|+|++|++++ .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 78889999999999999999998 389
Q ss_pred cCcc--CCCcCcEEeecCCCcccccCCccccccccceeeccccc-cCC-CccccccCcc-------CCceeeccccccCC
Q 042086 143 PTLG--NLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQ-LSG-SIPISLGNLS-------NLVVLHLFENSLFG 211 (784)
Q Consensus 143 ~~l~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~n~l~~ 211 (784)
+.++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|+.|+|++|+++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 9988 99999999999999999999999999999999999998 998 7888776665 9999999999999
Q ss_pred ccch--hhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccc-cceEeccCccccCCCCc
Q 042086 212 SIPS--ILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSS-LNYLVLNGNQLYGNLPR 288 (784)
Q Consensus 212 ~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~-L~~L~l~~n~l~~~~~~ 288 (784)
.+|. .++++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|.
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~--~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE--EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS--CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc--cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7787 8999999999999999999 778 8999999999999999998 88989999999 999999999999 7888
Q ss_pred cccCCCc--cceeecccCccCCCCccc---cc--ccccceEEecccccccCCCchhhhcccccCeeccCCcccccccccc
Q 042086 289 ALGSLTE--LEYLDLSTNKLGNSIPET---LG--NLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCE 361 (784)
Q Consensus 289 ~l~~l~~--L~~L~Ls~n~l~~~~~~~---l~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 361 (784)
.+..++. |+.|+|++|.+++.+|.. +. .+++|+.|+|++|+++...+..+..+++|+.|+|++|+++ .+|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChH
Confidence 8877754 999999999999876643 22 3458999999999999644444568999999999999999 77765
Q ss_pred cccc--------ccccEEecCCCccCCCCccccc--CcccceEEEcCCCCCcccCCCC-CCCcCCCcccccCCC
Q 042086 362 ICNM--------ESLEKLNLSHNNFSGLIPSCFE--GMHGLSCIDVSYNELRGPIPNS-RIFQYDPMEALQGNK 424 (784)
Q Consensus 362 ~~~l--------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~ 424 (784)
+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|.. ..+.......+..|+
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB
T ss_pred HhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC
Confidence 5443 39999999999999 6788876 99999999999999998 6642 223334444455543
No 177
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.8e-39 Score=339.50 Aligned_cols=253 Identities=24% Similarity=0.389 Sum_probs=197.5
Q ss_pred hcCCCCceeEecccceEEEEEEEcC----CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe-cCCc
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTS----GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS-HPRN 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~ 588 (784)
...|++.+.||+|+||.||+|+..+ +..||+|.+.... .....+.+.+|+.++++++||||+++++++. .++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 3468889999999999999998642 3368999887532 2223567999999999999999999999864 5567
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999997643 3578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC----CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC
Q 042086 669 FLKPDS----SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP 743 (784)
Q Consensus 669 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~ 743 (784)
.+.... .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||....... ....+...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--------~~~~~~~~ 248 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQG 248 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--------HHHHHHTT
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--------HHHHHhcC
Confidence 764322 12234567889999999999999999999999999999999 555654322111 11111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 744 RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 744 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.....+...+ ..+.+++.+||+.||++|||++|+++.|
T Consensus 249 ~~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L 286 (298)
T 3f66_A 249 RRLLQPEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRI 286 (298)
T ss_dssp CCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCccCC---HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111122222 3578899999999999999999999864
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.1e-39 Score=345.97 Aligned_cols=259 Identities=18% Similarity=0.263 Sum_probs=203.5
Q ss_pred HHHHhcCCCCc-eeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecC
Q 042086 510 IVRATNGFDVK-YCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHP 586 (784)
Q Consensus 510 ~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 586 (784)
.....+.|.+. +.||+|+||.||+|+.. +++.||+|++..... ......++.+|+.+++.+ +||||+++++++.+.
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 34456678877 89999999999999876 699999999876432 223467899999999999 579999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---CCceEEec
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---DYEARVSD 663 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~D 663 (784)
+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999999986432 24689999999999999999999999 9999999999999987 78999999
Q ss_pred cccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 042086 664 FGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDP 743 (784)
Q Consensus 664 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~ 743 (784)
||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+...
T Consensus 178 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~ 248 (327)
T 3lm5_A 178 FGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--------TYLNISQV 248 (327)
T ss_dssp GGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHT
T ss_pred CccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--------HHHHHHhc
Confidence 99998765332 2345679999999999999999999999999999999999999996432211 00011111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 744 RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 744 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....+..........+.+++.+||+.||++|||++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111111111122345788999999999999999999975
No 179
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.8e-39 Score=337.43 Aligned_cols=251 Identities=21% Similarity=0.363 Sum_probs=198.2
Q ss_pred hcCCCCceeEecccceEEEEEEEcC----CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTS----GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.++|++.+.||+|+||.||+|+... +..||+|.+.... .....+.|.+|+.+++.++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence 4679999999999999999998642 3469999987642 22245779999999999999999999999875 456
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 89999999999999997543 2578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCC
Q 042086 670 LKPDSS-NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-RLP 746 (784)
Q Consensus 670 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~~ 746 (784)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+... ..+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--------~~~~~~~~~~~ 234 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--------IGVLEKGDRLP 234 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--------HHHHHHTCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--------HHHHhcCCCCC
Confidence 654322 2234457889999999998899999999999999999998 9999863322110 0011111 111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+ ... ...+.+++.+||+.||++|||+.|+++.|
T Consensus 235 ~~-~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L 268 (281)
T 3cc6_A 235 KP-DLC---PPVLYTLMTRCWDYDPSDRPRFTELVCSL 268 (281)
T ss_dssp CC-TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CC-CCC---CHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence 11 122 23578899999999999999999999764
No 180
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=363.23 Aligned_cols=355 Identities=23% Similarity=0.226 Sum_probs=250.0
Q ss_pred CCeEEEEeCCCccc-------CCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEc
Q 042086 60 KRVISINLSTVGLK-------GNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDL 132 (784)
Q Consensus 60 ~~v~~l~l~~~~~~-------~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 132 (784)
.+++.+++....+. +.+++|++|+|++|+|++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 35666666665432 35677777777777777777777777777777777777777 45544 6777777777
Q ss_pred cCCccCC-CCCcCccCCCcCcEEeecCCCcccccCCcccccccc--ceeecccccc--CCCccccccC------------
Q 042086 133 SENQLSG-SIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSL--FYLHLSSNQL--SGSIPISLGN------------ 195 (784)
Q Consensus 133 ~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L--~~L~L~~n~l--~~~~~~~~~~------------ 195 (784)
++|.+++ .+|..|+.+++|++|+|++|.+++ ..+..+++| ++|+|++|.+ .+..|..+..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 7777776 356777777777777777777765 345566666 7777777777 5555554443
Q ss_pred --------------ccCCceeeccccc-------cCCccchhhhc---------------------------ccccceec
Q 042086 196 --------------LSNLVVLHLFENS-------LFGSIPSILGN---------------------------LKMLLHLG 227 (784)
Q Consensus 196 --------------l~~L~~L~L~~n~-------l~~~~~~~l~~---------------------------l~~L~~L~ 227 (784)
+++|+.|++++|. +.+.++ .++. .++|++|+
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence 3444555554443 111111 1111 23677777
Q ss_pred cCCCccccccCCCC-----cCCCCcceEEecCCCCCCCCccc-------------------------c-cccccccceEe
Q 042086 228 LSTNHLSGVIPLSI-----GNLNNLIGLYLYDNQLSVGEIPI-------------------------E-IGKLSSLNYLV 276 (784)
Q Consensus 228 L~~n~l~~~~~~~l-----~~l~~L~~L~L~~n~l~~~~~~~-------------------------~-l~~l~~L~~L~ 276 (784)
+++|++++.+|..+ ..+++|+.+++++|.+ .+|. . ...+++|++|+
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~---~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~ 330 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF---GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLD 330 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC---CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEE
T ss_pred eecccccCccccchhhcccccCceeEeccccccce---ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEE
Confidence 77777777777776 6666666666665554 1220 0 15678889999
Q ss_pred ccCccccCCCCccccCCCccceeecccCccCC--CCcccccccccceEEecccccccCCCch-hhhcccccCeeccCCcc
Q 042086 277 LNGNQLYGNLPRALGSLTELEYLDLSTNKLGN--SIPETLGNLLKLHYLNLSNNQFRKGFPV-ELEKLIQLSELDLSLNI 353 (784)
Q Consensus 277 l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~--~~~~~l~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~ 353 (784)
+++|++++..|..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|+.|++++|+
T Consensus 331 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~ 410 (520)
T 2z7x_B 331 FSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410 (520)
T ss_dssp CCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSC
T ss_pred eECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCC
Confidence 99999988888888889999999999999886 4567788889999999999998885554 47888899999999999
Q ss_pred ccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC--CCCcCCCcccccCCCCCCC
Q 042086 354 LEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS--RIFQYDPMEALQGNKGLCG 428 (784)
Q Consensus 354 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~~~c~ 428 (784)
+++.+|..+. ++|+.|+|++|+++ .+|..+..+++|++|++++|++++ +|.. ..+.......+.+|+..|.
T Consensus 411 l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 411 LTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 8887776664 78999999999988 567767788999999999999885 6653 2233444456677776665
No 181
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.9e-39 Score=344.93 Aligned_cols=259 Identities=20% Similarity=0.320 Sum_probs=196.6
Q ss_pred cCCCCc-eeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEE
Q 042086 515 NGFDVK-YCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 515 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 591 (784)
+.|++. +.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++.++ +||||+++++++.+.+..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC---SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC---cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 567774 78999999999999865 7999999998754 233567899999999985 79999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc---eEEecccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSDFGIAK 668 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfG~a~ 668 (784)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999997643 578899999999999999999999 9999999999999998776 9999999998
Q ss_pred ccCCCCC-------ccccccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccc---
Q 042086 669 FLKPDSS-------NCTELVGTFGYIAPELVYT-----MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNR--- 733 (784)
Q Consensus 669 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~--- 733 (784)
....... ......||+.|+|||.+.. ..++.++|||||||++|||++|+.||.............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6543211 1223468999999999875 558899999999999999999999997432211000000
Q ss_pred ----ccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 734 ----NISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 734 ----~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
......+.......+..........+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0001111111111110000112346889999999999999999999986
No 182
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.5e-39 Score=364.05 Aligned_cols=252 Identities=24% Similarity=0.349 Sum_probs=199.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.+.|++.+.||+|+||+||+|+.. +++.||+|++...... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 356999999999999999999976 7899999998764322 23467899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC---CceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD---YEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfG~a~~ 669 (784)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.. +.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999887543 478899999999999999999999 99999999999999764 5599999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
+... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....+.........
T Consensus 189 ~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 189 FENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYTFDS 258 (494)
T ss_dssp CBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCS
T ss_pred CCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCc
Confidence 7543 2335567999999999986 46899999999999999999999999743221 111111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 111122346789999999999999999999985
No 183
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.8e-38 Score=366.62 Aligned_cols=352 Identities=27% Similarity=0.269 Sum_probs=271.4
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEee
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHL 156 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (784)
+++++|||++|+|++..+.+|.++++|++|+|++|+|+++.|.+|+++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999888889999999999999999999888888999999999999999998777778899999999999
Q ss_pred cCCCcccccCCccccccccceeeccccccCC-CccccccCccCCceeeccccccCCccchhhhccccc------------
Q 042086 157 YGNSLSGSIPSIIGNLKSLFYLHLSSNQLSG-SIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKML------------ 223 (784)
Q Consensus 157 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L------------ 223 (784)
++|++++..+..|+++++|++|+|++|.+++ ..|..++.+++|++|+|++|++++..+..|..+.++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999997777788999999999999999875 357788889999999999998876665554433322
Q ss_pred --------------------------------------------------------------------------------
Q 042086 224 -------------------------------------------------------------------------------- 223 (784)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (784)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred ---------------------------------------ceeccCCCccccccC-------------------CCCcCCC
Q 042086 224 ---------------------------------------LHLGLSTNHLSGVIP-------------------LSIGNLN 245 (784)
Q Consensus 224 ---------------------------------------~~L~L~~n~l~~~~~-------------------~~l~~l~ 245 (784)
+.|++.+|.+.+..+ .....++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 222222222211110 0112356
Q ss_pred CcceEEecCCCCCCC------------------------CcccccccccccceEeccCccccCCCC-ccccCCCccceee
Q 042086 246 NLIGLYLYDNQLSVG------------------------EIPIEIGKLSSLNYLVLNGNQLYGNLP-RALGSLTELEYLD 300 (784)
Q Consensus 246 ~L~~L~L~~n~l~~~------------------------~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~ 300 (784)
+|+.|++++|.+... ..+..+..+++|+.+++..|......+ ..+..+++++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 777777777766411 122345567788888888877765443 4677888888999
Q ss_pred cccCccCCCCcccccccccceEEeccccccc-CCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccC
Q 042086 301 LSTNKLGNSIPETLGNLLKLHYLNLSNNQFR-KGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFS 379 (784)
Q Consensus 301 Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 379 (784)
++.|.+.+..+..+..+++|+.|++++|.+. +..|..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 9999888888888888888999999888744 456778888888999999999888888888888889999999999988
Q ss_pred CCCcccccCcccceEEEcCCCCCcccCCCCC-CC-cCCCcccccCCCCCCC
Q 042086 380 GLIPSCFEGMHGLSCIDVSYNELRGPIPNSR-IF-QYDPMEALQGNKGLCG 428 (784)
Q Consensus 380 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-~~-~~~~~~~~~~n~~~c~ 428 (784)
+..|..|..+++|++|||++|++++..|..- .+ .......+.+||+.|+
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 8888888888889999999998888776532 11 3344556788888885
No 184
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.7e-39 Score=340.86 Aligned_cols=252 Identities=25% Similarity=0.360 Sum_probs=199.0
Q ss_pred hcCCCCce-eEecccceEEEEEEEc---CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKY-CIGIGGQGSVYKAKLT---SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.++|++.+ .||+|+||.||+|.+. +++.||||++..... .....+++.+|+.+++.++||||+++++++ ..+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 45788888 9999999999999643 478999999876421 222356899999999999999999999999 55678
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999998653 478899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 042086 670 LKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 670 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------VTAMLEKGER 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCC
Confidence 7544322 122346788999999998889999999999999999999 999987432211 0001111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+.. ....+.+++.+||+.||++|||+.++++.|
T Consensus 239 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 274 (291)
T 1xbb_A 239 MGCPAG---CPREMYDLMNLCWTYDVENRPGFAAVELRL 274 (291)
T ss_dssp CCCCTT---CCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111112 233588899999999999999999999864
No 185
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.5e-39 Score=364.96 Aligned_cols=253 Identities=25% Similarity=0.332 Sum_probs=201.3
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCC----------CCChhhHHHHHHHHhccCCCceeeEEeE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCE----------MVPQPEFVNEIKTLTELRHRSIVKFYGF 582 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~l~~~ 582 (784)
.++|++.+.||+|+||+||+|+.. +++.||+|++....... ....+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 568999999999999999999976 68999999987643221 1345679999999999999999999999
Q ss_pred EecCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC---ce
Q 042086 583 CSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY---EA 659 (784)
Q Consensus 583 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~ 659 (784)
+.+....++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999987643 588999999999999999999999 999999999999998776 69
Q ss_pred EEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 660 RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 660 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
||+|||++..+... .......||+.|+|||.+. ..++.++||||+||++|+|++|+.||...... .....
T Consensus 189 kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~ 258 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIKK 258 (504)
T ss_dssp EECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHH
T ss_pred EEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 99999999877543 3345567999999999987 46899999999999999999999999743211 11111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 740 ILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 740 ~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+.......+.........++.+++.+||+.||++|||++|+++
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111110000112346889999999999999999999986
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3e-39 Score=363.97 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=203.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+....++|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH-BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 457999999999999999999976 799999999865322 223467899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec---CCCceEEeccccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC---LDYEARVSDFGIAKF 669 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfG~a~~ 669 (784)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999887543 588899999999999999999999 999999999999995 456799999999987
Q ss_pred cCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.........
T Consensus 174 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~ 243 (486)
T 3mwu_A 174 FQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFDL 243 (486)
T ss_dssp BCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCSCS
T ss_pred CCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC
Confidence 6543 23345679999999999876 5899999999999999999999998642211 111111111111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111223346889999999999999999999986
No 187
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.5e-39 Score=342.31 Aligned_cols=257 Identities=22% Similarity=0.346 Sum_probs=193.5
Q ss_pred HhcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC-
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR- 587 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 587 (784)
..++|++.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 4567999999999999999999764 355899999875422 1223467999999999999999999999997655
Q ss_pred ----ceEEEEecccCCCHHHHHhcC---CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceE
Q 042086 588 ----NSFLVYEYLERGSLATILSND---GAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEAR 660 (784)
Q Consensus 588 ----~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 660 (784)
..++||||+++|+|.+++... .....+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 349999999999999998532 2234689999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCC--cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccc
Q 042086 661 VSDFGIAKFLKPDSS--NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISL 737 (784)
Q Consensus 661 l~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 737 (784)
|+|||+++.+..... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ..
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~ 259 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--------MY 259 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--------HH
Confidence 999999987654321 2234457889999999999999999999999999999999 889986432211 11
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 738 NEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 738 ~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+........+. .....+.+++.+||+.||++|||+.++++.|
T Consensus 260 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 303 (313)
T 3brb_A 260 DYLLHGHRLKQPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303 (313)
T ss_dssp HHHHTTCCCCCBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHcCCCCCCCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111111111111 1223588899999999999999999999864
No 188
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=340.92 Aligned_cols=251 Identities=26% Similarity=0.409 Sum_probs=201.5
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..+.|++.+.||+|+||.||+|... +|+.||+|.+... ...+++.+|+.+++.++||||+++++++.+.+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT-----SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch-----HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 4568999999999999999999876 6999999998753 235789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999986432 3588899999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
..........|++.|+|||.+.+..++.++||||||+++|||++|+.||.......... .......+....
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~---- 247 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-----MIPTNPPPTFRK---- 247 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCSS----
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-----HHhcCCCcccCC----
Confidence 54444455678999999999999999999999999999999999999997433211000 000000011111
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......+.+++.+||+.||++|||+.++++
T Consensus 248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1112346889999999999999999999975
No 189
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.9e-39 Score=343.40 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=199.2
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEE--EEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEIL--AVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 590 (784)
++|++.+.||+|+||.||+|+.. +++.+ |+|.+.... .....+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 57999999999999999999865 56644 899886532 233456799999999999 8999999999999999999
Q ss_pred EEEecccCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC
Q 042086 591 LVYEYLERGSLATILSNDG-------------AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY 657 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 657 (784)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997653 224689999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 042086 658 EARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNIS 736 (784)
Q Consensus 658 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 736 (784)
.+||+|||+++..... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... .
T Consensus 180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------~ 250 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------L 250 (327)
T ss_dssp CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------H
T ss_pred eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--------H
Confidence 9999999999754321 12233456889999999998889999999999999999998 999986432211 0
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 737 LNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 737 ~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+........+... ...+.+++.+||+.||++|||++++++.|
T Consensus 251 ~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 251 YEKLPQGYRLEKPLNC---DDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp HHHGGGTCCCCCCTTB---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhhcCCCCCCCCCC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 0111111111111112 23578899999999999999999999764
No 190
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=370.76 Aligned_cols=251 Identities=24% Similarity=0.430 Sum_probs=203.8
Q ss_pred HhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
..++|++.+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 346789999999999999999999888899999997632 246789999999999999999999999976 678999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 340 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999996421 12478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCCC
Q 042086 673 DSS-NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILD-PRLPTPP 749 (784)
Q Consensus 673 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~ 749 (784)
... ......++..|+|||.+....++.++|||||||++|||++ |+.||....... ....+.. .++..+
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~~~~~- 486 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------VLDQVERGYRMPCP- 486 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--------HHHHHHTTCCCCCC-
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCC-
Confidence 211 1123456788999999999999999999999999999999 999986432211 0011111 122222
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
... ...+.+++.+||+.||++|||+++|++.|
T Consensus 487 ~~~---~~~l~~li~~cl~~dP~~RPt~~~l~~~L 518 (535)
T 2h8h_A 487 PEC---PESLHDLMCQCWRKEPEERPTFEYLQAFL 518 (535)
T ss_dssp TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 122 23578899999999999999999998764
No 191
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5e-39 Score=336.78 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=200.1
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... .....++.+|+..+..+ +||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 467999999999999999999986 7999999998764322 22356788999999999 99999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC--------------
Q 042086 592 VYEYLERGSLATILSNDGA-IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD-------------- 656 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-------------- 656 (784)
||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999975321 13588999999999999999999999 99999999999999844
Q ss_pred -----CceEEeccccccccCCCCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCccccccccc
Q 042086 657 -----YEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS 730 (784)
Q Consensus 657 -----~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~ 730 (784)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++|||||||++|||++|..|+......
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---- 237 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---- 237 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH----
T ss_pred ccCCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH----
Confidence 47999999999876543 234589999999999866 5668999999999999999999876422111
Q ss_pred cccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 731 SNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 731 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
..+.....+..+.... ..+.+++.+||+.||++|||+.|+++.
T Consensus 238 -------~~~~~~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 -------HEIRQGRLPRIPQVLS---QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -------HHHHTTCCCCCSSCCC---HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -------HHHHcCCCCCCCcccC---HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111222222222222 357889999999999999999999863
No 192
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.2e-39 Score=344.35 Aligned_cols=262 Identities=21% Similarity=0.345 Sum_probs=206.6
Q ss_pred HHHHHHhcCCCCceeEecccceEEEEEEE------cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEE
Q 042086 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFY 580 (784)
Q Consensus 508 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 580 (784)
.++....++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 34444567899999999999999999974 357899999987642 222345789999999999 799999999
Q ss_pred eEEecCC-ceEEEEecccCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCC
Q 042086 581 GFCSHPR-NSFLVYEYLERGSLATILSNDGA-------------IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDI 646 (784)
Q Consensus 581 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 646 (784)
+++...+ ..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9987654 58999999999999999976543 12278899999999999999999999 9999999
Q ss_pred CCCCeeecCCCceEEeccccccccCCCCCc--ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 042086 647 SSKNVLLCLDYEARVSDFGIAKFLKPDSSN--CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFI 723 (784)
Q Consensus 647 k~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~ 723 (784)
||+||+++.++.+||+|||+++.+...... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543322 234567889999999999999999999999999999998 99998643
Q ss_pred ccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 724 SSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.... .....+........+... ...+.+++.+||+.||++|||+.++++.|
T Consensus 255 ~~~~-------~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 255 KIDE-------EFCRRLKEGTRMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp CCSH-------HHHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhH-------HHHHHhccCccCCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 2110 000001111111111111 23578899999999999999999999864
No 193
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.6e-39 Score=337.86 Aligned_cols=256 Identities=19% Similarity=0.285 Sum_probs=197.4
Q ss_pred HhcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEE-ecCCceE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFC-SHPRNSF 590 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 590 (784)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+.+++.++|++++..++++ .+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 457899999999999999999997 478999999865432 234688999999999888777666655 6677889
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEeccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIA 667 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a 667 (784)
+||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 889999997543 2589999999999999999999999 99999999999999 78899999999999
Q ss_pred cccCCCCC-------cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042086 668 KFLKPDSS-------NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEI 740 (784)
Q Consensus 668 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 740 (784)
+....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~ 230 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-----KYERI 230 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-----HHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-----hhhhh
Confidence 87654332 2235678999999999999999999999999999999999999997433211100 00011
Q ss_pred cCCCCCCCCC-CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 741 LDPRLPTPPQ-NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 741 ~d~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.......+.. ........+.+++..||+.||++|||+++|++.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 275 (296)
T 4hgt_A 231 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred hcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 1101100000 0001123688999999999999999999999864
No 194
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.9e-39 Score=357.84 Aligned_cols=258 Identities=19% Similarity=0.268 Sum_probs=194.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC------
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP------ 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 586 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++..... .....+++.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 467999999999999999999866 689999999875421 222356788999999999999999999999654
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 356999999987 57776643 378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------cc------c
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS--------SS------N 732 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~--------~~------~ 732 (784)
|+..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......... .. .
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9876533 2345578999999999999999999999999999999999999999743211000 00 0
Q ss_pred cccccccccCCCC----------------CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 733 RNISLNEILDPRL----------------PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 733 ~~~~~~~~~d~~~----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
........+.... +...........++.+|+.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000011000 0000001112457889999999999999999999986
No 195
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.4e-39 Score=345.77 Aligned_cols=260 Identities=25% Similarity=0.339 Sum_probs=203.5
Q ss_pred hcCCCCceeEecccceEEEEEEE-----cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe--cC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS--HP 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~ 586 (784)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 35799999999999999999984 36889999998753 2223567999999999999999999999986 45
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 66889999999999999997532 2588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc------cccccccc
Q 042086 667 AKFLKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS------SSNRNISL 737 (784)
Q Consensus 667 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~------~~~~~~~~ 737 (784)
++........ .....+|+.|+|||.+.+..++.++||||||+++|||++|+.||......... ........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9877543321 23346788899999999988999999999999999999999998632211000 00000000
Q ss_pred cccc-CCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 738 NEIL-DPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 738 ~~~~-d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+.+ .......+. .....+.+++.+||+.||++|||++++++.|
T Consensus 254 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 298 (327)
T 3lxl_A 254 LELLEEGQRLPAPP---ACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298 (327)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhhcccCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 0111 111111111 2233588999999999999999999998764
No 196
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=335.94 Aligned_cols=251 Identities=22% Similarity=0.337 Sum_probs=197.4
Q ss_pred CCCCceeEecccceEEEEEEEc-C---CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce-E
Q 042086 516 GFDVKYCIGIGGQGSVYKAKLT-S---GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS-F 590 (784)
Q Consensus 516 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~ 590 (784)
.|+..+.||+|+||+||+|+.. + +..||+|.+.... .....+.+.+|+.+++.++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4666799999999999999854 2 2379999987532 222356789999999999999999999999776655 9
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+|+||+.+|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999997643 3678899999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC----CcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC-CCccccccccccccccccccccCCCC
Q 042086 671 KPDS----SNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP-RDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 671 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
.... .......+++.|+|||.+.+..++.++||||||+++|||++|..| |....... ....+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~--------~~~~~~~~~~ 246 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--------LTHFLAQGRR 246 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG--------HHHHHHTTCC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH--------HHHHhhcCCC
Confidence 4321 223345678899999999999999999999999999999996555 43221110 0011111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+... ...+.+++.+||+.||++|||++++++.|
T Consensus 247 ~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~l 282 (298)
T 3pls_A 247 LPQPEYC---PDSLYQVMQQCWEADPAVRPTFRVLVGEV 282 (298)
T ss_dssp CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCccc---hHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1111222 23578899999999999999999999864
No 197
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-40 Score=353.03 Aligned_cols=255 Identities=22% Similarity=0.315 Sum_probs=201.4
Q ss_pred cCCCCceeEecccceEEEEEEE----cCCCEEEEEEcCCCCC-CCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCc
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKL----TSGEILAVKKFHSLWP-CEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 588 (784)
++|++.+.||+|+||.||+|+. .+++.||||++..... ......+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999987 3789999999875321 1123456678899999999 69999999999999999
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999997643 578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-Cccccccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 669 FLKPDS-SNCTELVGTFGYIAPELVYT--MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 669 ~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
.+.... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ .......+.....
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS----QAEISRRILKSEP 283 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC----HHHHHHHHHHCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch----HHHHHHHHhccCC
Confidence 764322 22345679999999999985 3478899999999999999999999963221100 0000111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHh
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRP-----PMHTVCQL 783 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~~vl~~ 783 (784)
..+ . .....+.+++.+||+.||++|| +++|+++.
T Consensus 284 ~~~-~---~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 PYP-Q---EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCC-T---TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCC-c---ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 111 1 2223577899999999999999 99999863
No 198
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=345.69 Aligned_cols=244 Identities=17% Similarity=0.139 Sum_probs=197.6
Q ss_pred hcCCCCceeEecccceEEEEEE------EcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC---CCceeeEEeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAK------LTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR---HRSIVKFYGFCS 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 584 (784)
.++|++.+.||+|+||+||+|. ..+++.||||++... ...++..|+.+++.++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 4679999999999999999994 447899999998653 3567889999998887 999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC-------
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDG--AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL------- 655 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~------- 655 (784)
..+..++||||+++|+|.++++... ....+++..++.++.||++||+|||++ +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999997421 234689999999999999999999998 9999999999999998
Q ss_pred ----CCceEEeccccccccCC--CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc
Q 042086 656 ----DYEARVSDFGIAKFLKP--DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS 729 (784)
Q Consensus 656 ----~~~~kl~DfG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~ 729 (784)
++.+||+|||+|+.+.. ........+||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--- 291 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--- 291 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence 89999999999976542 223345667999999999999999999999999999999999999998532110
Q ss_pred ccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCC-CHHHHHH
Q 042086 730 SSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRP-PMHTVCQ 782 (784)
Q Consensus 730 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~~vl~ 782 (784)
.. .+.......+ . ...+.+++..|++.+|.+|+ +++++.+
T Consensus 292 ----~~----~~~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 292 ----EC----KPEGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp ----EE----EECSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred ----ce----eechhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 00 0111111111 1 23566788899999999985 6666554
No 199
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.7e-39 Score=341.97 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=200.5
Q ss_pred CCCceeEecccceEEEEEEEc-----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC--Cce
Q 042086 517 FDVKYCIGIGGQGSVYKAKLT-----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP--RNS 589 (784)
Q Consensus 517 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 589 (784)
|++.+.||+|+||.||++.+. +++.||||++.... .....+.+.+|++++++++||||+++++++.+. ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 489999999999999998643 68899999987642 222356799999999999999999999999874 578
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 111 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 8999999999999999764 378899999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccc------cccccccccccc
Q 042086 670 LKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISS------SSSNRNISLNEI 740 (784)
Q Consensus 670 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~------~~~~~~~~~~~~ 740 (784)
....... .....+|+.|+|||.+.+..++.++||||||+++|||+||+.||........ ..........+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 7644321 2344678889999999998999999999999999999999999864221000 000000001111
Q ss_pred cCCC-CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 741 LDPR-LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 741 ~d~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+... ....+. .....+.+++.+||+.||++|||++|+++.|
T Consensus 264 ~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 305 (318)
T 3lxp_A 264 LERGERLPRPD---KCPAEVYHLMKNCWETEASFRPTFENLIPIL 305 (318)
T ss_dssp HHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhcccCCCCCc---cccHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1111 111111 2234688999999999999999999999864
No 200
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9e-39 Score=336.29 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=200.1
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEE-ecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFC-SHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+.+++.++|++++..++++ .+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-----SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-----chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46899999999999999999997 579999999886532 245799999999999988776666655 56677899
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEecccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAK 668 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a~ 668 (784)
||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++.
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 889999997443 3589999999999999999999999 99999999999999 478899999999998
Q ss_pred ccCCCCCc-------ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 042086 669 FLKPDSSN-------CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEIL 741 (784)
Q Consensus 669 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 741 (784)
........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~ 231 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYERIS 231 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-----hhhhhhc
Confidence 76544321 24567999999999999999999999999999999999999999743321100 0001111
Q ss_pred CCCCCCCC-CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 742 DPRLPTPP-QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 742 d~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
......+. ........++.+++.+||+.||++|||+++|++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 275 (296)
T 3uzp_A 232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred ccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHH
Confidence 10100000 00001123588899999999999999999999864
No 201
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.8e-39 Score=335.90 Aligned_cols=247 Identities=26% Similarity=0.391 Sum_probs=193.0
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC-CceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP-RNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.+ |+.||||.+... ...+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch-----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 467999999999999999999875 889999998753 2457899999999999999999999997554 478999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.+++...+. ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 999999999999975321 2378889999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQN 751 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 751 (784)
. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+........+..
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 238 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------VVPRVEKGYKMDAPDG 238 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--------HHHHHTTTCCCCCCTT
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhcCCCCCCccc
Confidence 2 223467889999999999899999999999999999998 999987432211 0011111111111111
Q ss_pred CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 752 VQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 752 ~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+.+++.+||+.||++|||+.++++.|
T Consensus 239 ---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 268 (278)
T 1byg_A 239 ---CPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268 (278)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhcCChhhCCCHHHHHHHH
Confidence 223578899999999999999999999864
No 202
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.1e-39 Score=345.28 Aligned_cols=261 Identities=24% Similarity=0.318 Sum_probs=199.6
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec--------
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH-------- 585 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 585 (784)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... .......+.+|+.+++.++||||+++++++..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 57999999999999999999974 799999999876532 23345678899999999999999999999976
Q ss_pred CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccc
Q 042086 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFG 665 (784)
Q Consensus 586 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 665 (784)
.+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999986 8888776543 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCC----Cccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-----------
Q 042086 666 IAKFLKPDS----SNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS----------- 729 (784)
Q Consensus 666 ~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~----------- 729 (784)
+++.+.... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 998765322 22345678999999999876 45799999999999999999999998743211000
Q ss_pred -ccccccccccccCC-CC-CCCCCCCHHH------HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 730 -SSNRNISLNEILDP-RL-PTPPQNVQDE------LISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 730 -~~~~~~~~~~~~d~-~~-~~~~~~~~~~------~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+..+. .. ........+. ...+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00000000000000 00 0000111111 234789999999999999999999986
No 203
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=341.69 Aligned_cols=251 Identities=24% Similarity=0.393 Sum_probs=195.2
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEec-----
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSH----- 585 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----- 585 (784)
..++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC----cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 4678999999999999999999975 7899999998653 23457899999999999 89999999999976
Q ss_pred -CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecc
Q 042086 586 -PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664 (784)
Q Consensus 586 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 664 (784)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeC
Confidence 467899999999999999997643 23588899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVY-----TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNE 739 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 739 (784)
|++..............|++.|+|||.+. +..++.++|||||||++|||++|+.||......... ..
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~ 245 (326)
T 2x7f_A 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL--------FL 245 (326)
T ss_dssp TTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--------HH
T ss_pred cCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH--------HH
Confidence 99987654433445567899999999987 566889999999999999999999998643321100 00
Q ss_pred cc-CCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 740 IL-DPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 740 ~~-d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+. .+......... ...+.+++.+||+.||++|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 246 IPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHSCCCCCSCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhcCccccCCcccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 00000001111 235788999999999999999999986
No 204
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.5e-39 Score=333.24 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=203.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG--CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc--chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 457999999999999999999976 78999999986532 223457899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+..+..
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999998654 3588899999999999999999999 999999999999999999999999999986543
Q ss_pred CC--CcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042086 673 DS--SNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPP 749 (784)
Q Consensus 673 ~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 749 (784)
.. .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||+....... ....+.......
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~-- 228 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------EYSDWKEKKTYL-- 228 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-------HHHHHHTTCTTS--
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHHhhhccccc--
Confidence 22 22345678999999999987765 6789999999999999999999974322100 000111111000
Q ss_pred CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 750 QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 750 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011122345788999999999999999999986
No 205
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4e-39 Score=343.32 Aligned_cols=255 Identities=23% Similarity=0.302 Sum_probs=196.7
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCC-----CCCCChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWP-----CEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
..++|++.+.||+|+||.||+|+.. +++.||||.+..... ........+.+|+.++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999876 689999999875422 1122345689999999999999999999999765
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc---eEEec
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSD 663 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~D 663 (784)
. .++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 4 899999999999999987543 588899999999999999999999 9999999999999987654 99999
Q ss_pred cccccccCCCCCcccccccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042086 664 FGIAKFLKPDSSNCTELVGTFGYIAPELVY---TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEI 740 (784)
Q Consensus 664 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 740 (784)
||+++..... .......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... .....+
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~ 232 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-------SLKDQI 232 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-------CHHHHH
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-------HHHHHH
Confidence 9999876432 2234457899999999974 5668899999999999999999999986322110 000011
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 741 LDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 741 ~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
........+.........+.+++.+||+.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111111000112346889999999999999999999986
No 206
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-38 Score=342.13 Aligned_cols=258 Identities=23% Similarity=0.339 Sum_probs=202.6
Q ss_pred HHHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhc--cCCCceeeEEeEEecCC
Q 042086 510 IVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTE--LRHRSIVKFYGFCSHPR 587 (784)
Q Consensus 510 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~ 587 (784)
.....++|++.+.||+|+||.||+|+.. ++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3445678999999999999999999985 899999998642 35678899999887 78999999999998775
Q ss_pred ----ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEeCCCCCCeeecC
Q 042086 588 ----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH--------HDCFPPIVHRDISSKNVLLCL 655 (784)
Q Consensus 588 ----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~Dlk~~Nill~~ 655 (784)
..++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 789999999999999999753 4889999999999999999999 66 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCc----ccccccccccccccccccC------CcCcchhHHHHHHHHHHHHhC---------
Q 042086 656 DYEARVSDFGIAKFLKPDSSN----CTELVGTFGYIAPELVYTM------KVTEKCDVYSFGVLALEVIKG--------- 716 (784)
Q Consensus 656 ~~~~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslGv~l~elltg--------- 716 (784)
++.+||+|||++......... .....||+.|+|||.+.+. .++.++|||||||++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999999876544322 2445789999999999765 344689999999999999999
Q ss_pred -CCCCCccccccccccccccccccccCCCCCCC-CC--CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 717 -DHPRDFISSISSSSSNRNISLNEILDPRLPTP-PQ--NVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 717 -~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+.||........ ........+........ +. ...+....+.+++.+||+.||++|||+.+|++.|
T Consensus 263 ~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 263 YQLPYYDLVPSDP---SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp CCCTTTTTSCSSC---CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred cccCccccCcCcc---cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 666653221100 00000111111111111 11 1225566799999999999999999999999864
No 207
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.7e-39 Score=344.38 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=199.8
Q ss_pred hcCCCCceeEecccceEEEEEEE------cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL------TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 587 (784)
.++|++.+.||+|+||.||+|+. .+++.||||.+.... ......++.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 46799999999999999999983 257899999986432 2233567899999999999999999999999999
Q ss_pred ceEEEEecccCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---CCceE
Q 042086 588 NSFLVYEYLERGSLATILSNDGA----IEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---DYEAR 660 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~k 660 (784)
..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999976532 13588999999999999999999999 9999999999999984 44699
Q ss_pred EeccccccccCCCCC--cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCcccccccccccccccc
Q 042086 661 VSDFGIAKFLKPDSS--NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISL 737 (784)
Q Consensus 661 l~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 737 (784)
|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ...
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~ 255 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVL 255 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HHH
Confidence 999999986543221 2234567899999999998899999999999999999998 99998643211 001
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 738 NEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 738 ~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+........+... ...+.+++.+||+.||++|||+.++++.|
T Consensus 256 ~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l 299 (327)
T 2yfx_A 256 EFVTSGGRMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERI 299 (327)
T ss_dssp HHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhcCCCCCCCCCC---CHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 111111111111222 23578899999999999999999999864
No 208
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.7e-39 Score=341.33 Aligned_cols=252 Identities=24% Similarity=0.394 Sum_probs=197.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.+.|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 467999999999999999999986 6899999998754 334567899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999986532 2588999999999999999999999 999999999999999999999999999864322
Q ss_pred CCCcccccccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042086 673 DSSNCTELVGTFGYIAPELVY-----TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPT 747 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 747 (784)
.........||+.|+|||.+. ...++.++||||||+++|||++|+.||........ ...+.....+.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~ 241 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--------LLKIAKSDPPT 241 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------HHHHHHSCCCC
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--------HHHHhccCCcc
Confidence 212223457899999999983 66788999999999999999999999874332110 00000000000
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 748 PPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 748 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. .........+.+++.+||+.||++|||+.++++
T Consensus 242 ~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 L-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp C-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c-CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 011122346889999999999999999999975
No 209
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=345.35 Aligned_cols=260 Identities=26% Similarity=0.361 Sum_probs=194.4
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHH--hccCCCceeeEEeEEec-----C
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTL--TELRHRSIVKFYGFCSH-----P 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~~~~~~-----~ 586 (784)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.++. ..++||||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc------chhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46899999999999999999977 5899999998642 244555555554 45899999999986532 2
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEEeCCCCCCeeecCCCceE
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC------FPPIVHRDISSKNVLLCLDYEAR 660 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~Dlk~~Nill~~~~~~k 660 (784)
...++||||+++|+|.++++.. ..++..+..++.|+++||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 3568999999999999999764 3478889999999999999999873 23899999999999999999999
Q ss_pred EeccccccccCCCC--------Cccccccccccccccccccc-------CCcCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 042086 661 VSDFGIAKFLKPDS--------SNCTELVGTFGYIAPELVYT-------MKVTEKCDVYSFGVLALEVIKGDHPRDFISS 725 (784)
Q Consensus 661 l~DfG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslGv~l~elltg~~p~~~~~~ 725 (784)
|+|||+++.+.... .......||+.|+|||.+.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765321 11234579999999999986 4567799999999999999999877642221
Q ss_pred ccccccc---------ccc-----ccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 726 ISSSSSN---------RNI-----SLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 726 ~~~~~~~---------~~~-----~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....... ... .......+.++............+.+++.+||+.||++|||++|+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 1100000 000 0001111222222222334566799999999999999999999998864
No 210
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.5e-39 Score=349.81 Aligned_cols=256 Identities=11% Similarity=0.023 Sum_probs=182.0
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc--CCCceeeEE-------eEEe
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL--RHRSIVKFY-------GFCS 584 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 584 (784)
..|++.+.||+|+||.||+|++. +|+.||||++...........+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999976 7899999999875433333456678885544444 699988755 4443
Q ss_pred cC-----------------CceEEEEecccCCCHHHHHhcCCCCCCCCHHHH------HHHHHHHHHHHHHHhhCCCCCe
Q 042086 585 HP-----------------RNSFLVYEYLERGSLATILSNDGAIEEFNWTVR------MNVIRSVANALSYMHHDCFPPI 641 (784)
Q Consensus 585 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i 641 (784)
.+ ...++||||++ |+|.++++..+. .+.+..+ ..++.||+.||+|||++ +|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 33 23799999999 799999975422 2344455 67889999999999999 99
Q ss_pred EEeCCCCCCeeecCCCceEEeccccccccCCCCCccccccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCC
Q 042086 642 VHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT--MKVTEKCDVYSFGVLALEVIKGDHP 719 (784)
Q Consensus 642 vH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGv~l~elltg~~p 719 (784)
+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987542 2224567799999999987 6789999999999999999999999
Q ss_pred CCccccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 720 RDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
|........... ...............+ ........+.+++.+||+.||++|||+.++++
T Consensus 293 f~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSW-KRPSLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCC-CBCCTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccch-hhhhhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 975422110000 0000001111111111 01122346888999999999999999999975
No 211
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-39 Score=352.82 Aligned_cols=260 Identities=18% Similarity=0.250 Sum_probs=195.9
Q ss_pred hcCCCCceeEecccceEEEEEEEcC------CCEEEEEEcCCCCCCC--------CCChhhHHHHHHHHhccCCCceeeE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTS------GEILAVKKFHSLWPCE--------MVPQPEFVNEIKTLTELRHRSIVKF 579 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l 579 (784)
.++|++.+.||+|+||.||+|.+.+ ++.||||++....... ......+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998764 4789999986532100 0011224445556677789999999
Q ss_pred EeEEecC----CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec-
Q 042086 580 YGFCSHP----RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC- 654 (784)
Q Consensus 580 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~- 654 (784)
++++.+. ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4579999999 999999997643 3689999999999999999999999 999999999999999
Q ss_pred -CCCceEEeccccccccCCCCCc-------ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 042086 655 -LDYEARVSDFGIAKFLKPDSSN-------CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSI 726 (784)
Q Consensus 655 -~~~~~kl~DfG~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~ 726 (784)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||+.....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876533211 13445999999999999999999999999999999999999999742211
Q ss_pred ccc----ccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 727 SSS----SSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 727 ~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
... .........+++++.+.. ... ..++.+++..||+.||++||++++|++.|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l 324 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPA--ANA---PGEIAKYMETVKLLDYTEKPLYENLRDIL 324 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCT--TCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccc--ccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 000 000001111222222111 111 23578899999999999999999998764
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.3e-38 Score=329.90 Aligned_cols=262 Identities=23% Similarity=0.317 Sum_probs=202.0
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57999999999999999999976 799999999875432 2234568899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||++ |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 82 e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred Eccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 9998 599999976532 3578899999999999999999999 9999999999999999999999999999877554
Q ss_pred CCcccccccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccc---cccc--c
Q 042086 674 SSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-------SSNRNI---SLNE--I 740 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-------~~~~~~---~~~~--~ 740 (784)
........+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||......... ...... .... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 44445567899999999998765 789999999999999999999999743321100 000000 0000 0
Q ss_pred cCCCCCCCCCC-----CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 741 LDPRLPTPPQN-----VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 741 ~d~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+..+..... ......++.+++.+|++.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00111100000 0112346789999999999999999999986
No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.3e-38 Score=335.32 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=205.1
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC------CChhhHHHHHHHHhccC-CCceeeEEeEEe
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM------VPQPEFVNEIKTLTELR-HRSIVKFYGFCS 584 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 584 (784)
..++|++.+.||+|+||.||+|+.. +|+.||||++........ ...+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999976 689999999875432111 12356889999999995 999999999999
Q ss_pred cCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecc
Q 042086 585 HPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDF 664 (784)
Q Consensus 585 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 664 (784)
+.+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999997643 578899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccccccc------cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVY------TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLN 738 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 738 (784)
|++..+.... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||....... ...
T Consensus 169 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~ 239 (298)
T 1phk_A 169 GFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--------MLR 239 (298)
T ss_dssp TTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHH
T ss_pred cchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--------HHH
Confidence 9998765432 334567899999999985 4567889999999999999999999986432110 011
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 739 EILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 739 ~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.+.......+..........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111111111112233446889999999999999999999975
No 214
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-37 Score=367.20 Aligned_cols=350 Identities=25% Similarity=0.247 Sum_probs=269.6
Q ss_pred ccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCC-----CCCc----CccCCC
Q 042086 79 LSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSG-----SIPP----TLGNLS 149 (784)
Q Consensus 79 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-----~~p~----~l~~l~ 149 (784)
|++|+|++|++++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|++++|...+ .+|. .|..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 7777777777777777777777777777777777777777777777777777777765443 2222 566777
Q ss_pred cCcEEeecCCCcccccCCccccccccceeeccccccCCCc--cccccCc--cCCceeeccccccCCccchhhhcccccce
Q 042086 150 NLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSI--PISLGNL--SNLVVLHLFENSLFGSIPSILGNLKMLLH 225 (784)
Q Consensus 150 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~~~~~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 225 (784)
+|++|++++|.+++..+..|.++++|++|++++|.+.... ...|..+ ++|+.|++++|++++..+..|..+++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 7888888888887777777777788888888777654321 2223322 47788888888888777888888888888
Q ss_pred eccCCCccccccC-CCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCcccc--CCCCccccCCCccceeecc
Q 042086 226 LGLSTNHLSGVIP-LSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLY--GNLPRALGSLTELEYLDLS 302 (784)
Q Consensus 226 L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~--~~~~~~l~~l~~L~~L~Ls 302 (784)
|++++|++++.+| ..|.++++|++|++++|++. ...+..+..+++|+.|++++|.+. +..|..+..+++|+.|+++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYL-QLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEE-ECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcc-eeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 8888888876655 57788888888888888876 334556778888888888888876 5678888899999999999
Q ss_pred cCccCCCCcccccccccceEEecccccccCCCc--------hhhhcccccCeeccCCccccccccccccccccccEEecC
Q 042086 303 TNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFP--------VELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLS 374 (784)
Q Consensus 303 ~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 374 (784)
+|++++..+..|..+++|++|++++|++++..+ ..+..+++|+.|+|++|+++...+..|.++++|+.|+|+
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 999998777888899999999999999886422 237888999999999999994444568899999999999
Q ss_pred CCccCCCCcccccCcccceEEEcCCCCCcccCCCCC--CCcCCCcccccCCCCCCCC
Q 042086 375 HNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSR--IFQYDPMEALQGNKGLCGD 429 (784)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~ 429 (784)
+|++++..+..|..+++|+.|++++|++++..|... .+.......+.+||+.|+-
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 999998888888899999999999999988655321 2445556678899999874
No 215
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-38 Score=365.77 Aligned_cols=163 Identities=24% Similarity=0.190 Sum_probs=135.2
Q ss_pred cccceeEEcCC---CCeEEEEeCCCcc-------cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCC
Q 042086 49 CAWFGIQCNPA---KRVISINLSTVGL-------KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIP 118 (784)
Q Consensus 49 C~w~gv~C~~~---~~v~~l~l~~~~~-------~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 118 (784)
|.+.+++.-|. ..++.+++.+..+ .+.+++|++|+|++|+|++..|..|+++++|++|+|++|++++..|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 45566665543 4688888887643 3578899999999999999999999999999999999999998888
Q ss_pred CCCCCCCCCCEEEccCCccCCC-CCcCccCCCcCcEEeecCCCcccccC-CccccccccceeeccccccCCCccccccC-
Q 042086 119 PVIGNLKFLYHLDLSENQLSGS-IPPTLGNLSNLAVLHLYGNSLSGSIP-SIIGNLKSLFYLHLSSNQLSGSIPISLGN- 195 (784)
Q Consensus 119 ~~l~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~- 195 (784)
..|+++++|++|+|++|.+++. .|..++++++|++|++++|.+.+.+| ..|.++++|++|++++|.+++..|..+..
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 8899999999999999999873 57789999999999999998444454 68999999999999999999877777654
Q ss_pred -----------------------ccCCceeeccccccCC
Q 042086 196 -----------------------LSNLVVLHLFENSLFG 211 (784)
Q Consensus 196 -----------------------l~~L~~L~L~~n~l~~ 211 (784)
+++|++|++++|++++
T Consensus 172 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp SEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 5677777777887765
No 216
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-39 Score=354.20 Aligned_cols=202 Identities=26% Similarity=0.432 Sum_probs=163.6
Q ss_pred HHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEecCC--
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSHPR-- 587 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-- 587 (784)
...++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.+++.+. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C-CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 34678999999999999999999875 799999999865322 2223567889999999997 999999999997544
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..++||||++ |+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 6899999998 5999998753 578899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC---------------------CCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCc
Q 042086 668 KFLKPD---------------------SSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDF 722 (784)
Q Consensus 668 ~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~ 722 (784)
+.+... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 875431 112344679999999999986 6789999999999999999999999964
No 217
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.8e-39 Score=344.04 Aligned_cols=262 Identities=24% Similarity=0.383 Sum_probs=198.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 357999999999999999999976 589999999865421 122245688999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.++....+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 103 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999998876543 488899999999999999999999 999999999999999999999999999987765
Q ss_pred CCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCcccccccccc----------------cccc
Q 042086 673 DSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSS----------------NRNI 735 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~----------------~~~~ 735 (784)
.........||+.|+|||.+.+. .++.++|||||||++|||++|+.||........... ....
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 54445566799999999999875 688999999999999999999999964332110000 0000
Q ss_pred ccccccCCCCCCCCC---CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 736 SLNEILDPRLPTPPQ---NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 736 ~~~~~~d~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......+....... ..+.....+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000011100000 00112346889999999999999999999986
No 218
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-37 Score=364.42 Aligned_cols=343 Identities=26% Similarity=0.242 Sum_probs=222.1
Q ss_pred CCeEEEEeCCCccc-------CCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEc
Q 042086 60 KRVISINLSTVGLK-------GNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDL 132 (784)
Q Consensus 60 ~~v~~l~l~~~~~~-------~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 132 (784)
.+++.+++....+. +++++|++|+|++|++++..|..|+++++|++|+|++|++++..+.+|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 36777887765432 45677888888888888888888888888888888888888655567888888888888
Q ss_pred cCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCcccccc--CccCCceeeccccccC
Q 042086 133 SENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLG--NLSNLVVLHLFENSLF 210 (784)
Q Consensus 133 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~ 210 (784)
++|++++..|..|+++++|++|+|++|.+++..|..+.++++|++|++++|.+++..+..+. .+++|++|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 88888876677788888888888888888877777777788888888887777765554433 3355666666666555
Q ss_pred Cccch---------------------------------------------------hhhcccc--cceeccCCCcccccc
Q 042086 211 GSIPS---------------------------------------------------ILGNLKM--LLHLGLSTNHLSGVI 237 (784)
Q Consensus 211 ~~~~~---------------------------------------------------~l~~l~~--L~~L~L~~n~l~~~~ 237 (784)
+..+. .|.+++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 44443 3333332 666666666666555
Q ss_pred CCCCcCCCCcceEEecCCCCCCCCccccc---------------------------------ccccccceEeccCccccC
Q 042086 238 PLSIGNLNNLIGLYLYDNQLSVGEIPIEI---------------------------------GKLSSLNYLVLNGNQLYG 284 (784)
Q Consensus 238 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~l---------------------------------~~l~~L~~L~l~~n~l~~ 284 (784)
+..|..+++|++|++++|+++ ...|..+ ..+++|++|++++|.+++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQ-HLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBS-EECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred cccccCcccccEeeCCCCccC-ccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 566666666666666666554 1222223 333444444444444444
Q ss_pred CCCccccCCCccceeecccCccCCCC--ccccccc--ccceEEecccccccCCCchhhhcccccCeeccCCcccccccc-
Q 042086 285 NLPRALGSLTELEYLDLSTNKLGNSI--PETLGNL--LKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIP- 359 (784)
Q Consensus 285 ~~~~~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~l--~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~- 359 (784)
..+..|..+++|++|++++|.++... ...+..+ ++|+.|++++|++++..|..+..+++|+.|+|++|.+.+.+|
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 423 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc
Confidence 44444444444444444444322110 0111111 244445555566666667777788888888888888877665
Q ss_pred ccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCc
Q 042086 360 CEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELR 403 (784)
Q Consensus 360 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 403 (784)
..+.++++|+.|++++|++.+..+..|..+++|+.|++++|.+.
T Consensus 424 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 467 (680)
T 1ziw_A 424 QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK 467 (680)
T ss_dssp GGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCB
T ss_pred ccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccc
Confidence 56777788888888888877777777777777777777777665
No 219
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.3e-39 Score=335.27 Aligned_cols=244 Identities=23% Similarity=0.405 Sum_probs=201.3
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec------
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH------ 585 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 585 (784)
...+|++.+.||+|+||.||+|+.. +++.||+|++... .+.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-------SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-------cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 3467999999999999999999986 7999999998653 2467899999999999999999998854
Q ss_pred ----------CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC
Q 042086 586 ----------PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL 655 (784)
Q Consensus 586 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 655 (784)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 345789999999999999997532 23588999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 042086 656 DYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNI 735 (784)
Q Consensus 656 ~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~ 735 (784)
++.+||+|||++....... ......|++.|+|||.+.+..++.++||||||+++|||++|..|+......
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--------- 227 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF--------- 227 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH---------
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH---------
Confidence 9999999999998775432 234557899999999999999999999999999999999999987422111
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 736 SLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 736 ~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
...+.+...+ ... ...+.+++.+||+.||++|||+.|+++.|
T Consensus 228 -~~~~~~~~~~---~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 228 -FTDLRDGIIS---DIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp -HHHHHTTCCC---TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -HHHhhccccc---ccC---CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 0111111111 111 22477899999999999999999999864
No 220
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=349.14 Aligned_cols=260 Identities=20% Similarity=0.237 Sum_probs=194.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCC--------CCChhhHHHHHHHHhccCCCceeeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCE--------MVPQPEFVNEIKTLTELRHRSIVKFYG 581 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~ 581 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... ......+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999975 57899999987532110 012234778888999999999999999
Q ss_pred EEec----CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC
Q 042086 582 FCSH----PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY 657 (784)
Q Consensus 582 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 657 (784)
++.+ ....++||||+ +++|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9977 67889999999 999999997643 689999999999999999999999 999999999999999887
Q ss_pred --ceEEeccccccccCCCCC-------cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccc
Q 042086 658 --EARVSDFGIAKFLKPDSS-------NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISS 728 (784)
Q Consensus 658 --~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~ 728 (784)
.+||+|||+++.+..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||+.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999987643211 12445799999999999999999999999999999999999999953211000
Q ss_pred cccccccccccccCCCCCCCC---CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 729 SSSNRNISLNEILDPRLPTPP---QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 729 ~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.. . ..........+... ........++.+++..||+.||++|||+++|++.|
T Consensus 269 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 269 AV---Q-TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp HH---H-HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred HH---H-HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 00 0 00000000000000 00001123688899999999999999999999864
No 221
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.6e-38 Score=350.42 Aligned_cols=200 Identities=24% Similarity=0.382 Sum_probs=168.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC-----C
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP-----R 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 587 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+++++.++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 468999999999999999999876 688999999975422 222356789999999999999999999999765 5
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..++||||+++ +|.++++... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~~~-~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIADS-DLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCSE-EHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCCc-CHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 68999999874 9999997643 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------------------ccccccccccccccccc-ccCCcCcchhHHHHHHHHHHHHhCCCCCC
Q 042086 668 KFLKPDSS----------------------NCTELVGTFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKGDHPRD 721 (784)
Q Consensus 668 ~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslGv~l~elltg~~p~~ 721 (784)
+....... .....+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87654321 13566899999999986 56669999999999999999999766654
No 222
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-38 Score=368.36 Aligned_cols=245 Identities=26% Similarity=0.372 Sum_probs=194.0
Q ss_pred eeEecccceEEEEEEEc---CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEEeccc
Q 042086 521 YCIGIGGQGSVYKAKLT---SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVYEYLE 597 (784)
Q Consensus 521 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 597 (784)
+.||+|+||.||+|.+. +++.||||+++.... .....++|.+|++++++++|||||++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 47999999999999653 568899999876422 22345789999999999999999999999975 56889999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCCCCc-
Q 042086 598 RGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSN- 676 (784)
Q Consensus 598 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~- 676 (784)
+|+|.++++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 453 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999997643 588899999999999999999999 9999999999999999999999999999877543321
Q ss_pred --ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 677 --CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 677 --~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+........+...
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------~~~~i~~~~~~~~p~~~- 597 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------VTAMLEKGERMGCPAGC- 597 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCCCCCCTTC-
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCCCCC-
Confidence 233456789999999999999999999999999999998 999997432211 01111111111111222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 754 DELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..++.+++..||+.||++||++++|++.|
T Consensus 598 --~~~l~~li~~cl~~dP~~RPs~~~l~~~L 626 (635)
T 4fl3_A 598 --PREMYDLMNLCWTYDVENRPGFAAVELRL 626 (635)
T ss_dssp --CHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred --CHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 23578899999999999999999999864
No 223
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.3e-39 Score=338.74 Aligned_cols=253 Identities=25% Similarity=0.415 Sum_probs=192.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc--CCC--EEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT--SGE--ILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
.++|++.+.||+|+||.||+|++. +++ .||||+++..........+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357999999999999999999853 333 68999987653333344678999999999999999999999998754 8
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997542 3588899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC--
Q 042086 670 LKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-- 743 (784)
Q Consensus 670 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-- 743 (784)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--------ILHKIDKEGE 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTSCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--------HHHHHHccCC
Confidence 7544322 223457788999999998889999999999999999999 999987432211 01111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 744 RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 744 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+.+ . .....+.+++.+||+.||++|||+.++++.|
T Consensus 243 ~~~~~-~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 279 (291)
T 1u46_A 243 RLPRP-E---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279 (291)
T ss_dssp CCCCC-T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCC-c---CcCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 11111 1 2234688899999999999999999999764
No 224
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.9e-39 Score=346.02 Aligned_cols=255 Identities=20% Similarity=0.330 Sum_probs=203.3
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCCh--------------hhHHHHHHHHhccCCCceeeE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQ--------------PEFVNEIKTLTELRHRSIVKF 579 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--------------~~~~~E~~~l~~l~h~niv~l 579 (784)
.++|++.+.||+|+||.||+|+. +++.||+|.+........... +.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999999 899999999865422211111 789999999999999999999
Q ss_pred EeEEecCCceEEEEecccCCCHHHH------HhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCee
Q 042086 580 YGFCSHPRNSFLVYEYLERGSLATI------LSNDGAIEEFNWTVRMNVIRSVANALSYMHH-DCFPPIVHRDISSKNVL 652 (784)
Q Consensus 580 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nil 652 (784)
++++.+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ . +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 5432 13468999999999999999999999 8 9999999999999
Q ss_pred ecCCCceEEeccccccccCCCCCcccccccccccccccccccC-CcCc-chhHHHHHHHHHHHHhCCCCCCccccccccc
Q 042086 653 LCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTM-KVTE-KCDVYSFGVLALEVIKGDHPRDFISSISSSS 730 (784)
Q Consensus 653 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslGv~l~elltg~~p~~~~~~~~~~~ 730 (784)
++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||.......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--- 259 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV--- 259 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH---
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH---
Confidence 999999999999999876433 34556789999999999877 6666 9999999999999999999997433210
Q ss_pred cccccccccccCCCCCCCC---------------CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 731 SNRNISLNEILDPRLPTPP---------------QNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 731 ~~~~~~~~~~~d~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.....+.......+. .........+.+++.+||+.||++|||+.|+++
T Consensus 260 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 260 ----ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ----HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000000000 000122346889999999999999999999986
No 225
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-38 Score=332.25 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=197.1
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec----CCce
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH----PRNS 589 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 589 (784)
..|++.+.||+|+||.||+|... ++..||+|.+..... .....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 34788899999999999999875 688999999875422 22235679999999999999999999999865 3568
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEeCCCCCCeeec-CCCceEEecccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP--IVHRDISSKNVLLC-LDYEARVSDFGI 666 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~DfG~ 666 (784)
++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999997643 478899999999999999999998 7 99999999999998 789999999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
+..... .......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||........ ....+.....+
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~ 248 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-------IYRRVTSGVKP 248 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-------HHHHHTTTCCC
T ss_pred cccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-------HHHHHhccCCc
Confidence 976543 23345679999999998864 589999999999999999999999964322110 00011111000
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. .........+.+++.+||+.||++|||++|+++
T Consensus 249 ~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 A--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c--ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 000111235889999999999999999999986
No 226
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.7e-39 Score=339.63 Aligned_cols=263 Identities=23% Similarity=0.390 Sum_probs=185.3
Q ss_pred HhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
..++|++.+.||+|+||.||+|+.. +++.||||.+..... ....+++.+|+.++++++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 3578999999999999999999865 789999998865422 2345678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhc-----CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 592 VYEYLERGSLATILSN-----DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
||||+++|+|.+++.. ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999863 11234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-----ccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042086 667 AKFLKPDSS-----NCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEI 740 (784)
Q Consensus 667 a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 740 (784)
+........ ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||....................
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 987643221 1234578999999999875 5688999999999999999999999975332110000000000000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 741 LDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 741 ~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..... ...........+.+++.+||+.||++|||+.++++
T Consensus 248 -~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 -ETGVQ-DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -TC------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -ccccc-cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000 00001112235788999999999999999999986
No 227
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=339.98 Aligned_cols=259 Identities=26% Similarity=0.407 Sum_probs=202.4
Q ss_pred hcCCCCceeEecccceEEEEEEE-----cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC-
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-----TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR- 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 587 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 35689999999999999999984 36899999998763 2334568999999999999999999999986644
Q ss_pred -ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 588 -NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 588 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 7899999999999999997653 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCc---ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccc----ccccccc---cc
Q 042086 667 AKFLKPDSSN---CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSIS----SSSSNRN---IS 736 (784)
Q Consensus 667 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~----~~~~~~~---~~ 736 (784)
+......... .....++..|+|||.+.+..++.++||||||+++|||+||..|+....... ....... ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9877544322 223456778999999998889999999999999999999999976321100 0000000 00
Q ss_pred cccccC--CCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 737 LNEILD--PRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 737 ~~~~~d--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
..+.+. .+.+.+ ... ..++.+++.+||+.||++|||+.|+++.|
T Consensus 272 ~~~~~~~~~~~~~~-~~~---~~~l~~li~~cl~~dP~~Rps~~el~~~L 317 (326)
T 2w1i_A 272 LIELLKNNGRLPRP-DGC---PDEIYMIMTECWNNNVNQRPSFRDLALRV 317 (326)
T ss_dssp HHHHHHTTCCCCCC-TTC---CHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HHHHhhcCCCCCCC-Ccc---cHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 011111 111111 222 23588899999999999999999999864
No 228
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-38 Score=356.04 Aligned_cols=195 Identities=24% Similarity=0.384 Sum_probs=154.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec-----CC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH-----PR 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 587 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|+++++.++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 367999999999999999999876 789999999865322 22235678999999999999999999999843 35
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..++||||+. |+|.++++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 6899999985 69999997643 588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---------------------------Cccccccccccccccccc-ccCCcCcchhHHHHHHHHHHHHhC
Q 042086 668 KFLKPDS---------------------------SNCTELVGTFGYIAPELV-YTMKVTEKCDVYSFGVLALEVIKG 716 (784)
Q Consensus 668 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslGv~l~elltg 716 (784)
+.+.... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8764321 123445789999999986 466799999999999999999994
No 229
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=358.25 Aligned_cols=335 Identities=22% Similarity=0.292 Sum_probs=272.5
Q ss_pred CCeEEEEeCCCcc-------cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccc-cCCCCCCCCCCCCEEE
Q 042086 60 KRVISINLSTVGL-------KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSA-SIPPVIGNLKFLYHLD 131 (784)
Q Consensus 60 ~~v~~l~l~~~~~-------~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~ 131 (784)
.++..+++.+..+ .+.+++|++|+|++|+|+. +|.. .+++|++|+|++|.+++ .+|..|+++++|++|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 4677778776543 4578999999999999994 5655 89999999999999997 5789999999999999
Q ss_pred ccCCccCCCCCcCccCCCcC--cEEeecCCCc--ccccCCcccc--------------------------cc--------
Q 042086 132 LSENQLSGSIPPTLGNLSNL--AVLHLYGNSL--SGSIPSIIGN--------------------------LK-------- 173 (784)
Q Consensus 132 L~~n~l~~~~p~~l~~l~~L--~~L~L~~n~l--~~~~~~~l~~--------------------------l~-------- 173 (784)
|++|.+++ ..+..+++| +.|+|++|.+ .+..|..+.. ++
T Consensus 122 L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 198 (520)
T 2z7x_B 122 LSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198 (520)
T ss_dssp EEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE
T ss_pred ecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc
Confidence 99999986 467788888 9999999999 6666666655 22
Q ss_pred -------------------------------------------------ccceeeccccccCCCccccc-----cCccCC
Q 042086 174 -------------------------------------------------SLFYLHLSSNQLSGSIPISL-----GNLSNL 199 (784)
Q Consensus 174 -------------------------------------------------~L~~L~L~~n~l~~~~~~~~-----~~l~~L 199 (784)
+|++|++++|.++|.+|..+ ..+++|
T Consensus 199 ~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L 278 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL 278 (520)
T ss_dssp ECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE
T ss_pred ccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee
Confidence 45555555555555555555 556666
Q ss_pred ceeeccccccCCccc-hhhhcc---cccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceE
Q 042086 200 VVLHLFENSLFGSIP-SILGNL---KMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYL 275 (784)
Q Consensus 200 ~~L~L~~n~l~~~~~-~~l~~l---~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L 275 (784)
+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|+++ +.+|..+..+++|++|
T Consensus 279 ~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L 353 (520)
T 2z7x_B 279 SIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLT-DTVFENCGHLTELETL 353 (520)
T ss_dssp EEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC-TTTTTTCCCCSSCCEE
T ss_pred Eeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccC-hhhhhhhccCCCCCEE
Confidence 6666666665 233 334433 45777777777765322 1268899999999999998 4577889999999999
Q ss_pred eccCccccC--CCCccccCCCccceeecccCccCCCCccc-ccccccceEEecccccccCCCchhhhcccccCeeccCCc
Q 042086 276 VLNGNQLYG--NLPRALGSLTELEYLDLSTNKLGNSIPET-LGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLN 352 (784)
Q Consensus 276 ~l~~n~l~~--~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 352 (784)
++++|++++ .+|..+..+++|++|++++|.+++.+|.. +..+++|++|++++|++++..|..+. ++|+.|+|++|
T Consensus 354 ~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N 431 (520)
T 2z7x_B 354 ILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSN 431 (520)
T ss_dssp ECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSS
T ss_pred EccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCC
Confidence 999999996 55678999999999999999999856654 88899999999999999987777664 79999999999
Q ss_pred cccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 353 ILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 353 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
+++ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++.|.++.
T Consensus 432 ~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 432 KIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 999 8898888999999999999999976555599999999999999999998874
No 230
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=332.93 Aligned_cols=252 Identities=21% Similarity=0.275 Sum_probs=198.1
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCC-CCCChhhHHHHHHHHhccCCCceeeEEeEEe--cCCce
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPC-EMVPQPEFVNEIKTLTELRHRSIVKFYGFCS--HPRNS 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 589 (784)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999975 7899999998753211 1234578999999999999999999999984 45678
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
++||||++++ |.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999886 777776543 24688999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CcccccccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 670 LKPDS--SNCTELVGTFGYIAPELVYTMK--VTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 670 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
..... .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||+...... ....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~i~~~~~ 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--------LFENIGKGSY 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--------HHHHHhcCCC
Confidence 65322 2234557899999999997644 4779999999999999999999997432110 0111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+ ... ...+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~-~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 AIP-GDC---GPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CCC-SSS---CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCC-Ccc---CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 112 235778999999999999999999986
No 231
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.6e-37 Score=356.94 Aligned_cols=336 Identities=23% Similarity=0.197 Sum_probs=266.6
Q ss_pred ccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecC
Q 042086 79 LSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYG 158 (784)
Q Consensus 79 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 158 (784)
.+++|+++|++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 4899999999996 676664 8999999999999988889999999999999999999998899999999999999999
Q ss_pred CCcccccCCccccccccceeeccccccCCC-ccccccCccCCceeeccccccCCccchhhhccccc--ceeccCCCcc--
Q 042086 159 NSLSGSIPSIIGNLKSLFYLHLSSNQLSGS-IPISLGNLSNLVVLHLFENSLFGSIPSILGNLKML--LHLGLSTNHL-- 233 (784)
Q Consensus 159 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L--~~L~L~~n~l-- 233 (784)
|.++ .+|.. .+++|++|+|++|.+++. +|..|+++++|++|+|++|++++. .+..+++| +.|++++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 56666 899999999999999963 468999999999999999999763 45556666 9999999999
Q ss_pred ccccCCCCcCC--------------------------CCcceEEecCCCCCCCCccc---c-------------------
Q 042086 234 SGVIPLSIGNL--------------------------NNLIGLYLYDNQLSVGEIPI---E------------------- 265 (784)
Q Consensus 234 ~~~~~~~l~~l--------------------------~~L~~L~L~~n~l~~~~~~~---~------------------- 265 (784)
++..|..+..+ ++|+.|++++|+.....++. .
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 76666666543 34555555554210000000 0
Q ss_pred --------cccccccceEeccCccccCCCCccc-----------------------------------------------
Q 042086 266 --------IGKLSSLNYLVLNGNQLYGNLPRAL----------------------------------------------- 290 (784)
Q Consensus 266 --------l~~l~~L~~L~l~~n~l~~~~~~~l----------------------------------------------- 290 (784)
....++|++|++++|.++|.+|..+
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCc
Confidence 0001245555555555554444433
Q ss_pred ------cCCCccceeecccCccCCCCcccccccccceEEecccccccCC--CchhhhcccccCeeccCCccccccccc-c
Q 042086 291 ------GSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKG--FPVELEKLIQLSELDLSLNILEGKIPC-E 361 (784)
Q Consensus 291 ------~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~ 361 (784)
..+++|++|++++|.+++.+|..+.++++|++|++++|++++. +|..+..+++|+.|++++|++++.+|. .
T Consensus 344 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 423 (562)
T 3a79_B 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRT 423 (562)
T ss_dssp CCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCC
T ss_pred ccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhh
Confidence 6789999999999999999999999999999999999999983 356789999999999999999985665 4
Q ss_pred ccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC-CCCcCCCcccccCCCCC
Q 042086 362 ICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS-RIFQYDPMEALQGNKGL 426 (784)
Q Consensus 362 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~ 426 (784)
+..+++|+.|+|++|++++.+|..+. ++|+.|++++|+++. +|.. ..........+.+|...
T Consensus 424 ~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 424 CAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCC
T ss_pred hcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCC
Confidence 78899999999999999988887665 789999999999984 6653 23344444556666433
No 232
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-38 Score=345.77 Aligned_cols=270 Identities=21% Similarity=0.252 Sum_probs=199.1
Q ss_pred cHHHHHHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCC--------hhhHHHHHHHHhccCCCcee
Q 042086 506 LYEEIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVP--------QPEFVNEIKTLTELRHRSIV 577 (784)
Q Consensus 506 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv 577 (784)
...++....++|++.+.||+|+||.||+|...+|+.||||++.......... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3456777889999999999999999999998889999999987643322211 26799999999999999999
Q ss_pred eEEeEEec-----CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCee
Q 042086 578 KFYGFCSH-----PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVL 652 (784)
Q Consensus 578 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nil 652 (784)
++++++.. ....++||||++ |+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999843 335799999998 58988887543 3688999999999999999999999 9999999999999
Q ss_pred ecCCCceEEeccccccccCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-
Q 042086 653 LCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS- 730 (784)
Q Consensus 653 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~- 730 (784)
++.++.+||+|||+++..... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..........
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999865432 23345678999999999876 678999999999999999999999997432110000
Q ss_pred -------cc-------cccccccccCCCCCCCCCC-----CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 731 -------SN-------RNISLNEILDPRLPTPPQN-----VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 731 -------~~-------~~~~~~~~~d~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.. ......+.+.......+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00 0000000000111100000 0111235889999999999999999999986
No 233
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=371.18 Aligned_cols=305 Identities=27% Similarity=0.263 Sum_probs=253.5
Q ss_pred CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccC-CCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcE
Q 042086 75 NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASI-PPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAV 153 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 153 (784)
.+++|++|||++|.|++..|..|.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+.+..|..|.++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 5578999999999999999999999999999999999766555 889999999999999999999999999999999999
Q ss_pred EeecCCCcccccCCc--cccccccceeeccccccCCCcc-ccccCccCCceeeccccccCCccchhhhcc--cccceecc
Q 042086 154 LHLYGNSLSGSIPSI--IGNLKSLFYLHLSSNQLSGSIP-ISLGNLSNLVVLHLFENSLFGSIPSILGNL--KMLLHLGL 228 (784)
Q Consensus 154 L~L~~n~l~~~~~~~--l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L 228 (784)
|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|++
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 999999999876665 9999999999999999997755 579999999999999999999999999887 78999999
Q ss_pred CCCccccccCCCCcCCCC------cceEEecCCCCCCCCcccccc-----------------------------------
Q 042086 229 STNHLSGVIPLSIGNLNN------LIGLYLYDNQLSVGEIPIEIG----------------------------------- 267 (784)
Q Consensus 229 ~~n~l~~~~~~~l~~l~~------L~~L~L~~n~l~~~~~~~~l~----------------------------------- 267 (784)
++|.+.+..|..++.+++ |+.|++++|.++ +..+..+.
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f 260 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWT-VDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTF 260 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSS-TTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCc-hhHHHHHHhhcCcccccceecccccccccccccccCCCChhhh
Confidence 999988877777666655 888888888665 12222111
Q ss_pred -c--ccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhccccc
Q 042086 268 -K--LSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQL 344 (784)
Q Consensus 268 -~--l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 344 (784)
. .++|+.|++++|.+.+..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|
T Consensus 261 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 340 (844)
T 3j0a_A 261 AGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKV 340 (844)
T ss_dssp TTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTC
T ss_pred hccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCC
Confidence 1 2567778888888777777777777888888888888877777777777888888888888877777777778888
Q ss_pred CeeccCCccccccccccccccccccEEecCCCccCC
Q 042086 345 SELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSG 380 (784)
Q Consensus 345 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 380 (784)
+.|++++|.+.+..+..|..+++|+.|+|++|.+++
T Consensus 341 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 341 AYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 888888887776666677777777777777777765
No 234
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=9.9e-39 Score=345.89 Aligned_cols=258 Identities=23% Similarity=0.350 Sum_probs=201.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 457999999999999999999976 78999999987642 222356789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++..+ .+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999997643 4788999999999999999999831 799999999999999999999999999976532
Q ss_pred CCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------------cc-------
Q 042086 673 DSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-------------SN------- 732 (784)
Q Consensus 673 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-------------~~------- 732 (784)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 2234578999999999999999999999999999999999999996432110000 00
Q ss_pred ----------c----ccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 733 ----------R----NISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 733 ----------~----~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. ......+.....+..+. .....++.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCT--TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCc--ccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 00000000011111000 112336889999999999999999999986
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.3e-38 Score=331.58 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=204.3
Q ss_pred HHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce
Q 042086 511 VRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS 589 (784)
Q Consensus 511 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 589 (784)
....++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 345678999999999999999999976 789999999865432 233567899999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC---CceEEecccc
Q 042086 590 FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD---YEARVSDFGI 666 (784)
Q Consensus 590 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfG~ 666 (784)
++|+||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 99999999999999886543 578899999999999999999999 99999999999999754 4699999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
+....... ......+++.|+|||.+.+. ++.++||||||+++|+|++|+.||....... ....+......
T Consensus 171 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 240 (287)
T 2wei_A 171 STCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYD--------ILKRVETGKYA 240 (287)
T ss_dssp GGTBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCC
T ss_pred ceeecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCCC
Confidence 98765432 23445689999999998764 8899999999999999999999986432211 00111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...........++.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 111111122346789999999999999999999986
No 236
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=348.09 Aligned_cols=253 Identities=18% Similarity=0.209 Sum_probs=198.2
Q ss_pred hcCCCCceeEecccceEEEEEEEcC---------CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceee------
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTS---------GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVK------ 578 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------ 578 (784)
.++|++.+.||+|+||.||+|+... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 3679999999999999999998763 889999998642 47889999999999999988
Q ss_pred ---------EEeEEec-CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCC
Q 042086 579 ---------FYGFCSH-PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISS 648 (784)
Q Consensus 579 ---------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~ 648 (784)
+++++.. ....++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 6777765 67889999999 999999998642 24689999999999999999999999 999999999
Q ss_pred CCeeecCCC--ceEEeccccccccCCCCC-------cccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 042086 649 KNVLLCLDY--EARVSDFGIAKFLKPDSS-------NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719 (784)
Q Consensus 649 ~Nill~~~~--~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p 719 (784)
+||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 899999999987653221 12345799999999999999999999999999999999999999
Q ss_pred CCcccccccccccc----ccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 720 RDFISSISSSSSNR----NISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 720 ~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
|............. ........+... .......++.+++.+||+.||++|||+++|++.|
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 331 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCG-----HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL 331 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTS-----CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhcc-----ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence 97532110000000 000000110000 0001123688899999999999999999998864
No 237
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-38 Score=343.82 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=193.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC-----
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR----- 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 587 (784)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 467999999999999999999875 799999999865322 2223467889999999999999999999997653
Q ss_pred -ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 588 -NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 588 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
..++||||+ +++|.++++.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 77999999753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------cccccccc-
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-------SSNRNISL- 737 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-------~~~~~~~~- 737 (784)
++..... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ........
T Consensus 175 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 175 ARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9875432 345678999999999887 67899999999999999999999999743321100 00000000
Q ss_pred --------------ccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 738 --------------NEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 738 --------------~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.......+.. ........+.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFAS---ILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGG---TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHH---HCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000000 01112335789999999999999999999986
No 238
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=341.17 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=182.9
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEe-------
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCS------- 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~------- 584 (784)
..+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 357999999999999999999975 7899999988543 2233567899999999995 999999999984
Q ss_pred -cCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEeCCCCCCeeecCCCceEE
Q 042086 585 -HPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPP--IVHRDISSKNVLLCLDYEARV 661 (784)
Q Consensus 585 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl 661 (784)
.....++||||+. |+|.+++........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3345789999996 69999987533334689999999999999999999998 7 999999999999999999999
Q ss_pred eccccccccCCCCCc------------cccccccccccccccc---ccCCcCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 042086 662 SDFGIAKFLKPDSSN------------CTELVGTFGYIAPELV---YTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSI 726 (784)
Q Consensus 662 ~DfG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~ 726 (784)
+|||+++........ .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||+.....
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543221 1134589999999998 5667889999999999999999999998642221
Q ss_pred cccccccccccccccCCCCCCC-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 727 SSSSSNRNISLNEILDPRLPTP-PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 727 ~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.+.......+ .... ...+.+++.+||+.||++|||+.|+++.|
T Consensus 260 ------------~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 260 ------------RIVNGKYSIPPHDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp ------------------CCCCTTCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ------------HhhcCcccCCccccc---chHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1111111111 1111 12477899999999999999999999864
No 239
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=337.85 Aligned_cols=256 Identities=19% Similarity=0.293 Sum_probs=197.9
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe----cCCc
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS----HPRN 588 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~ 588 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.+++.++||||+++++++. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 35799999999999999999997 47999999988653 2234567999999999999999999999986 3347
Q ss_pred eEEEEecccCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 589 SFLVYEYLERGSLATILSNDG-AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 789999999999999987521 124688999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCc---------ccccccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 042086 668 KFLKPDSSN---------CTELVGTFGYIAPELVYTMK---VTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNI 735 (784)
Q Consensus 668 ~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~ 735 (784)
......... .....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||+........ ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---VAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---HHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---hhH
Confidence 765321111 12345799999999987554 688999999999999999999998642211000 000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 736 SLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 736 ~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
.... ....+... .....+.+++.+||+.||++|||++++++.|
T Consensus 259 ~~~~--~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 259 AVQN--QLSIPQSP----RHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp HHHC--C--CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred Hhhc--cCCCCccc----cCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 0000 01111111 1233688999999999999999999999864
No 240
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.6e-38 Score=335.46 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=191.8
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec-------
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH------- 585 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 585 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 467999999999999999999975 7999999998642 2235678999999999999999999998854
Q ss_pred ------CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCce
Q 042086 586 ------PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEA 659 (784)
Q Consensus 586 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 659 (784)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 356789999999999999997643 3567888999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCC--------------CcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCccc
Q 042086 660 RVSDFGIAKFLKPDS--------------SNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFIS 724 (784)
Q Consensus 660 kl~DfG~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~ 724 (784)
||+|||++....... .......|++.|+|||.+.+. .++.++|||||||++|||++ ||....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 999999998764321 122345689999999999764 68999999999999999998 443111
Q ss_pred cccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 725 SISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 725 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
.. ......+.......++.........+.+++.+||+.||++|||+.++++.
T Consensus 233 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 ER-------VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HH-------HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hH-------HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00 00001111111111111222333457889999999999999999999863
No 241
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.9e-38 Score=345.42 Aligned_cols=197 Identities=20% Similarity=0.293 Sum_probs=172.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc------CCCceeeEEeEEecC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL------RHRSIVKFYGFCSHP 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~ 586 (784)
..+|++.+.||+|+||.||+|+.. +++.||||++... ....+++.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 457999999999999999999876 6899999998752 22345778888888877 577999999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc--eEEecc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE--ARVSDF 664 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~Df 664 (784)
+..++||||+. ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 599999876542 3589999999999999999999999 9999999999999999987 999999
Q ss_pred ccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCc
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDF 722 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~ 722 (784)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 999765432 3446789999999999999999999999999999999999999864
No 242
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.7e-38 Score=333.89 Aligned_cols=252 Identities=20% Similarity=0.265 Sum_probs=197.7
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEec--CCceE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSH--PRNSF 590 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~ 590 (784)
++|++.+.||+|+||.||+|+.. +++.||||++... ..+.+.+|+.++++++ ||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 57999999999999999999864 7899999998642 3678999999999997 9999999999987 56789
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC-ceEEeccccccc
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY-EARVSDFGIAKF 669 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~ 669 (784)
+||||+++++|.++++ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.
T Consensus 110 lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 9999999999999985 377889999999999999999999 999999999999999776 899999999987
Q ss_pred cCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------------------
Q 042086 670 LKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS------------------- 729 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~------------------- 729 (784)
..... ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 181 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 181 YHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 65433 3345678999999999987 66899999999999999999999998422110000
Q ss_pred -ccccccccccccCCCCC------CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 730 -SSNRNISLNEILDPRLP------TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 730 -~~~~~~~~~~~~d~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.........+....... ...........++.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000000000 000011112346889999999999999999999986
No 243
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4e-38 Score=342.14 Aligned_cols=258 Identities=19% Similarity=0.270 Sum_probs=191.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC-----
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR----- 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 587 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 357999999999999999999875 689999999875321 2223467889999999999999999999997654
Q ss_pred -ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 588 -NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 588 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
..++||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999975 88888863 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccc-------------
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNR------------- 733 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~------------- 733 (784)
++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.............
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9876432 22345678999999999999999999999999999999999999997433211000000
Q ss_pred -c---------------cccccccCCC-CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 734 -N---------------ISLNEILDPR-LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 734 -~---------------~~~~~~~d~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
. ......+... .+............+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0000000000 00000011122557899999999999999999999986
No 244
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.2e-37 Score=332.45 Aligned_cols=263 Identities=20% Similarity=0.296 Sum_probs=200.8
Q ss_pred HhcCCCCceeEecccceEEEEEEE--cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc---CCCceeeEEeEEe---
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKL--TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL---RHRSIVKFYGFCS--- 584 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 584 (784)
..++|++.+.||+|+||.||+|+. .+|+.||+|++...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 457899999999999999999997 36889999998754322 22345677888888776 8999999999987
Q ss_pred --cCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEe
Q 042086 585 --HPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVS 662 (784)
Q Consensus 585 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 662 (784)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 599999976432 3488999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------ccccc
Q 042086 663 DFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS--------SSNRN 734 (784)
Q Consensus 663 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~--------~~~~~ 734 (784)
|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99999865432 2234567899999999999999999999999999999999999999743221100 00000
Q ss_pred cc------cccccCCC-CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 735 IS------LNEILDPR-LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 735 ~~------~~~~~d~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.. ....+... ..............+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00000000 00000011122345788999999999999999999985
No 245
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.4e-38 Score=341.79 Aligned_cols=266 Identities=21% Similarity=0.228 Sum_probs=189.0
Q ss_pred HHHHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC
Q 042086 508 EEIVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP 586 (784)
Q Consensus 508 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 586 (784)
++.....++|++.+.||+|+||.||+|+.. +|+.||||++... ......+.+|++.++.++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD----PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC----TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC----ccccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 345667789999999999999999999975 7899999988653 22345677889999999999999999998653
Q ss_pred Cc-------eEEEEecccCCCHHHHHhc-CCCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEEeCCCCCCeeecC-
Q 042086 587 RN-------SFLVYEYLERGSLATILSN-DGAIEEFNWTVRMNVIRSVANALSYMH--HDCFPPIVHRDISSKNVLLCL- 655 (784)
Q Consensus 587 ~~-------~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivH~Dlk~~Nill~~- 655 (784)
+. .++||||+++ +|.+.+.. ......+++..+..++.|++.|+.||| +. +|+||||||+||+++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 33 7899999987 55544432 122346788999999999999999999 77 9999999999999997
Q ss_pred CCceEEeccccccccCCCCCcccccccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCCcccccccccc---
Q 042086 656 DYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSS--- 731 (784)
Q Consensus 656 ~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~--- 731 (784)
++.+||+|||+++.+.... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...........
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp TTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHH
Confidence 8999999999998765433 334567899999999987654 89999999999999999999999974322100000
Q ss_pred ----cccc---------ccccccCCC-CC---CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 732 ----NRNI---------SLNEILDPR-LP---TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 732 ----~~~~---------~~~~~~d~~-~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.... ......+.. .. ............+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 000000000 00 000011123456889999999999999999999986
No 246
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.1e-38 Score=331.10 Aligned_cols=254 Identities=21% Similarity=0.325 Sum_probs=185.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...... ....+.+..+...++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 467999999999999999999975 7899999998754211 11223344555568888999999999999999999999
Q ss_pred EecccCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 593 YEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
|||+++ +|.+++... .....+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999985 888877531 11236899999999999999999999852 89999999999999999999999999998765
Q ss_pred CCCCccccccccccccccccc----ccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC-CCC
Q 042086 672 PDSSNCTELVGTFGYIAPELV----YTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDP-RLP 746 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~~ 746 (784)
... ......||+.|+|||.+ .+..++.++|||||||++|||++|+.||+...... ......+.. ...
T Consensus 162 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~ 233 (290)
T 3fme_A 162 DDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-------QQLKQVVEEPSPQ 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-------HHHHHHHHSCCCC
T ss_pred ccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-------HHHHHHhccCCCC
Confidence 432 23445789999999996 56678899999999999999999999997422110 001111111 111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.+... ....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 LPADK---FSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCTTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccccc---CCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11111 2335788999999999999999999986
No 247
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9e-38 Score=341.75 Aligned_cols=257 Identities=21% Similarity=0.249 Sum_probs=191.4
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCC------c
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPR------N 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 588 (784)
.+|++.+.||+|+||+||+|+...+..||+|++.... +...+|+++++.++||||+++++++.... .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~-------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc-------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 4699999999999999999999877779999886532 12237999999999999999999985433 2
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec-CCCceEEeccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC-LDYEARVSDFGIA 667 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfG~a 667 (784)
.++||||++++.+............+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 789999998854433332222234688899999999999999999999 999999999999999 7899999999999
Q ss_pred cccCCCCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCcccccccc--------ccccc---c
Q 042086 668 KFLKPDSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS--------SSNRN---I 735 (784)
Q Consensus 668 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~--------~~~~~---~ 735 (784)
+.+.... ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||......... ....+ .
T Consensus 190 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 190 KILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp EECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 8765433 23456789999999998765 5899999999999999999999999743321000 00000 0
Q ss_pred ccccccCCCCCCCCCC------CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 736 SLNEILDPRLPTPPQN------VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 736 ~~~~~~d~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..........+..... ......++.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000001111110000 0012236889999999999999999999986
No 248
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.7e-38 Score=349.23 Aligned_cols=255 Identities=19% Similarity=0.284 Sum_probs=200.2
Q ss_pred hcCCCCceeEecccceEEEEEEE-cCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCC-CceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-TSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH-RSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++..|+++++.++| +++..+..++.+.+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-----SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 46899999999999999999986 479999999876532 23468899999999976 566667777778888999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee---cCCCceEEecccccc
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL---CLDYEARVSDFGIAK 668 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfG~a~ 668 (784)
||||+ +++|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 889999997543 3689999999999999999999999 99999999999999 688999999999998
Q ss_pred ccCCCCCc-------ccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 042086 669 FLKPDSSN-------CTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEIL 741 (784)
Q Consensus 669 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 741 (784)
.+...... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-----~~~~i~ 229 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-----KYEKIS 229 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH-----HHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH-----HHHHHh
Confidence 77644322 225679999999999999999999999999999999999999997533211000 000000
Q ss_pred CCCCCCCC-CCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 742 DPRLPTPP-QNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 742 d~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
........ ........++.+++..||+.||++||++++|++.|
T Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L 273 (483)
T 3sv0_A 230 EKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLF 273 (483)
T ss_dssp HHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 00000000 00001123688999999999999999999998764
No 249
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.8e-38 Score=334.59 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=172.8
Q ss_pred hcCCCCce-eEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHH-HHHhccCCCceeeEEeEEec----C
Q 042086 514 TNGFDVKY-CIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEI-KTLTELRHRSIVKFYGFCSH----P 586 (784)
Q Consensus 514 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~----~ 586 (784)
.++|.+.+ .||+|+||.||+|+.. +++.||||++... . ...+|+ ..++.++||||+++++++.. .
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~-~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-------P-KARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-------H-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-------H-HHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 56788854 6999999999999977 7999999998642 2 233333 34566799999999999865 4
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---CCceEEec
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---DYEARVSD 663 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~D 663 (784)
...++||||+++|+|.+++...+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 458999999999999999986542 4689999999999999999999999 9999999999999976 45599999
Q ss_pred cccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 042086 664 FGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDP 743 (784)
Q Consensus 664 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~ 743 (784)
||+++..... ......+|+.|+|||.+.+..++.++|||||||++|||++|+.||.......... .....+...
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~ 248 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----GMKRRIRLG 248 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----hHHHhhhcc
Confidence 9999876432 2345678999999999988889999999999999999999999986432211000 000111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 744 RLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 744 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....+..........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111223346889999999999999999999986
No 250
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.8e-38 Score=340.80 Aligned_cols=259 Identities=22% Similarity=0.325 Sum_probs=198.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC-----C
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP-----R 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 587 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 468999999999999999999876 78899999987532 222346789999999999999999999999654 3
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..++||||+++ +|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 68999999975 999998753 488899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc---cccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------cccccc
Q 042086 668 KFLKPDSSN---CTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-------SNRNIS 736 (784)
Q Consensus 668 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-------~~~~~~ 736 (784)
+........ .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 876533221 244589999999998764 458999999999999999999999996433211000 000000
Q ss_pred cccccC-------CCCCCCCCC-----CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 737 LNEILD-------PRLPTPPQN-----VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 737 ~~~~~d-------~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.+ ...+..... ......++.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 000000000 0111245789999999999999999999986
No 251
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=334.81 Aligned_cols=253 Identities=18% Similarity=0.328 Sum_probs=196.5
Q ss_pred HhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
..++|++.+.||+|+||.||+|+..+ .||+|++..... .....+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 35789999999999999999998864 489999876432 233456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++++|.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999997643 3578899999999999999999999 999999999999998 68999999999876532
Q ss_pred C-----CCccccccccccccccccccc---------CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042086 673 D-----SSNCTELVGTFGYIAPELVYT---------MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLN 738 (784)
Q Consensus 673 ~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 738 (784)
. ........|++.|+|||.+.. ..++.++||||||+++|||++|+.||.......... ...
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-----~~~ 256 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW-----QMG 256 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH-----HHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----Hhc
Confidence 1 122334568999999999864 357889999999999999999999997432210000 000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 739 EILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 739 ~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....+.... .. ...++.+++.+||+.||++|||++++++.|
T Consensus 257 ~~~~~~~~~--~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 297 (319)
T 2y4i_B 257 TGMKPNLSQ--IG---MGKEISDILLFCWAFEQEERPTFTKLMDML 297 (319)
T ss_dssp TTCCCCCCC--SS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred cCCCCCCCc--CC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 001111110 01 112477899999999999999999999864
No 252
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=340.15 Aligned_cols=260 Identities=22% Similarity=0.239 Sum_probs=192.9
Q ss_pred HHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec----
Q 042086 511 VRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH---- 585 (784)
Q Consensus 511 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 585 (784)
....++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 345678999999999999999999874 79999999986532 223479999999999999999999843
Q ss_pred ----------------------------------CCceEEEEecccCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHH
Q 042086 586 ----------------------------------PRNSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVANAL 630 (784)
Q Consensus 586 ----------------------------------~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l 630 (784)
....++||||+++ +|.+.+... .....+++..+..++.|+++||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 2347899999985 887777531 1123688999999999999999
Q ss_pred HHHhhCCCCCeEEeCCCCCCeeec-CCCceEEeccccccccCCCCCcccccccccccccccccccCC-cCcchhHHHHHH
Q 042086 631 SYMHHDCFPPIVHRDISSKNVLLC-LDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMK-VTEKCDVYSFGV 708 (784)
Q Consensus 631 ~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslGv 708 (784)
+|||+. +|+||||||+||+++ .++.+||+|||+++.+.... ......+|+.|+|||.+.+.. ++.++||||+||
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 999999 999999999999998 68899999999998765433 334567899999999988654 899999999999
Q ss_pred HHHHHHhCCCCCCccccccccc--------cccc------cccccccCCCCCCCC---CCCHHHHHHHHHHHHhcccCCC
Q 042086 709 LALEVIKGDHPRDFISSISSSS--------SNRN------ISLNEILDPRLPTPP---QNVQDELISIVEVAFLCLNESP 771 (784)
Q Consensus 709 ~l~elltg~~p~~~~~~~~~~~--------~~~~------~~~~~~~d~~~~~~~---~~~~~~~~~l~~li~~cl~~dP 771 (784)
++|||++|+.||.......... ...+ ....+..-+...... .........+.+++.+||+.||
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999997433211000 0000 000000000000000 0000122357899999999999
Q ss_pred CCCCCHHHHHH
Q 042086 772 ESRPPMHTVCQ 782 (784)
Q Consensus 772 ~~RPs~~~vl~ 782 (784)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999985
No 253
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.7e-38 Score=343.74 Aligned_cols=258 Identities=20% Similarity=0.284 Sum_probs=199.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC--------CCceeeEEeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR--------HRSIVKFYGFCS 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~ 584 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 367999999999999999999865 6899999998742 223567889999999985 788999999987
Q ss_pred ----cCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCC---
Q 042086 585 ----HPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDY--- 657 (784)
Q Consensus 585 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~--- 657 (784)
+....++||||+ ++++.+++.... ...+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 556789999999 557777665432 235889999999999999999999963 899999999999999775
Q ss_pred ----------------------------------------------ceEEeccccccccCCCCCcccccccccccccccc
Q 042086 658 ----------------------------------------------EARVSDFGIAKFLKPDSSNCTELVGTFGYIAPEL 691 (784)
Q Consensus 658 ----------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~ 691 (784)
.+||+|||+++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876532 344578999999999
Q ss_pred cccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------------c----------------ccccccccccC
Q 042086 692 VYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-------------S----------------NRNISLNEILD 742 (784)
Q Consensus 692 ~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-------------~----------------~~~~~~~~~~d 742 (784)
+.+..++.++|||||||++|||++|+.||+......... . ........+.+
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997432110000 0 00000000000
Q ss_pred CCC-------CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 743 PRL-------PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 743 ~~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
... ........+....+.+|+.+||+.||++|||++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000 0001123455678999999999999999999999986
No 254
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.4e-37 Score=333.89 Aligned_cols=257 Identities=19% Similarity=0.285 Sum_probs=201.0
Q ss_pred hcCCCCceeEecccceEEEEEEE-c-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc------eeeEEeEEec
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKL-T-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS------IVKFYGFCSH 585 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~ 585 (784)
.++|++.+.||+|+||.||+|.. . +++.||||++... ....+.+.+|+.+++.++|++ ++++++++.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 35899999999999999999987 3 6899999998642 223567889999999887654 9999999999
Q ss_pred CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC----------
Q 042086 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---------- 655 (784)
Q Consensus 586 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---------- 655 (784)
.+..++||||+ +++|.+++...+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 8899999976542 3578899999999999999999999 9999999999999987
Q ss_pred ---------CCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 042086 656 ---------DYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSI 726 (784)
Q Consensus 656 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~ 726 (784)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999875432 34567899999999999999999999999999999999999999643221
Q ss_pred cccc-------cccc-----ccccccc-C-------------------CCCCCCCCCCHHHHHHHHHHHHhcccCCCCCC
Q 042086 727 SSSS-------SNRN-----ISLNEIL-D-------------------PRLPTPPQNVQDELISIVEVAFLCLNESPESR 774 (784)
Q Consensus 727 ~~~~-------~~~~-----~~~~~~~-d-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 774 (784)
.... .... ....... . ................+.+++.+||+.||++|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 0000 0000 0000000 0 00000001122445678999999999999999
Q ss_pred CCHHHHHH
Q 042086 775 PPMHTVCQ 782 (784)
Q Consensus 775 Ps~~~vl~ 782 (784)
||++|+++
T Consensus 321 pt~~ell~ 328 (339)
T 1z57_A 321 ITLREALK 328 (339)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999985
No 255
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.3e-37 Score=330.11 Aligned_cols=250 Identities=24% Similarity=0.377 Sum_probs=194.9
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC--CCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR--HRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++.+.+..++
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 467999999999999999999998899999999865322 2223567899999999997 5999999999999999999
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
||| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++ ++.+||+|||+++.+.
T Consensus 106 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccccc
Confidence 999 56789999998653 578899999999999999999999 999999999999996 5899999999998765
Q ss_pred CCCCc--cccccccccccccccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042086 672 PDSSN--CTELVGTFGYIAPELVYT-----------MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLN 738 (784)
Q Consensus 672 ~~~~~--~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 738 (784)
..... .....|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~~~ 250 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLH 250 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HHHHH
Confidence 43221 234578999999999875 46888999999999999999999998642211 01111
Q ss_pred cccCCCCCC-CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 739 EILDPRLPT-PPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 739 ~~~d~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.++++.... .+... ...+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 251 AIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhcccccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 222222111 11111 235788999999999999999999986
No 256
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-37 Score=343.24 Aligned_cols=256 Identities=25% Similarity=0.300 Sum_probs=190.9
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC------C
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP------R 587 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 587 (784)
..|++.+.||+|+||.||+|+.. +|+.||||++.... ..+.+|+++++.++||||+++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 46899999999999999999986 69999999986532 2234799999999999999999998432 2
Q ss_pred ceEEEEecccCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC-CceEEeccc
Q 042086 588 NSFLVYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD-YEARVSDFG 665 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfG 665 (784)
..++||||+++ ++.+.+... .....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999987 676665421 1224688999999999999999999999 99999999999999965 578999999
Q ss_pred cccccCCCCCcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCccccccccc--------ccc---
Q 042086 666 IAKFLKPDSSNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS--------SNR--- 733 (784)
Q Consensus 666 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~--------~~~--- 733 (784)
+++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... ...
T Consensus 203 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 203 SAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 998765433 23456789999999999765 68999999999999999999999997433211000 000
Q ss_pred ---ccccccccCCCCCCCCC---CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 734 ---NISLNEILDPRLPTPPQ---NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 734 ---~~~~~~~~d~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.....+...+.....+- .......++.+|+.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00000000011100000 00111246889999999999999999999985
No 257
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-37 Score=334.92 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=197.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHH-HhccCCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKT-LTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .....++..|+.+ ++.++||||+++++++.+++..++
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 467899999999999999999874 799999999876422 1224456666665 777899999999999999999999
Q ss_pred EEecccCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 592 VYEYLERGSLATILSND-GAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
||||+++ +|.+++... .....+++..+..++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999986 999988641 11246899999999999999999999742 8999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccccc----cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 671 KPDSSNCTELVGTFGYIAPELVY----TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 671 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
... .......||+.|+|||.+. ...++.++|||||||++|||++|+.||+..... ......++....+
T Consensus 205 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~~~ 276 (340)
T 3an0_A 205 VDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPSP 276 (340)
T ss_dssp SCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCCC
T ss_pred ccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HHHHHHHhcCCCC
Confidence 432 1223357899999999964 346889999999999999999999999742211 0011111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+ ......++.+++.+||+.||++|||+.|+++
T Consensus 277 ~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 QLP--ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCC--GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCC--cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111 1122346889999999999999999999986
No 258
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=347.44 Aligned_cols=200 Identities=23% Similarity=0.381 Sum_probs=155.5
Q ss_pred hcCCCC-ceeEecccceEEEEEEEc---CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe--cCC
Q 042086 514 TNGFDV-KYCIGIGGQGSVYKAKLT---SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS--HPR 587 (784)
Q Consensus 514 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~ 587 (784)
.+.|++ .++||+|+||+||+|+.. +++.||||++... ...+.+.+|+.+++.++||||+++++++. ...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-----GISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS-----SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC-----CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 344665 568999999999999965 5789999998653 22457889999999999999999999994 467
Q ss_pred ceEEEEecccCCCHHHHHhcCC------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee----cCCC
Q 042086 588 NSFLVYEYLERGSLATILSNDG------AIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL----CLDY 657 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~ 657 (784)
..++||||+++ +|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 88999999975 8888875321 122488999999999999999999999 99999999999999 6778
Q ss_pred ceEEeccccccccCCCC---CcccccccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCCc
Q 042086 658 EARVSDFGIAKFLKPDS---SNCTELVGTFGYIAPELVYTM-KVTEKCDVYSFGVLALEVIKGDHPRDF 722 (784)
Q Consensus 658 ~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslGv~l~elltg~~p~~~ 722 (784)
.+||+|||+++.+.... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99999999998765332 223456789999999999874 589999999999999999999999963
No 259
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.7e-38 Score=339.01 Aligned_cols=257 Identities=21% Similarity=0.300 Sum_probs=181.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC------
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP------ 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 586 (784)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 468999999999999999999865 789999999875321 222356788999999999999999999998654
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
...++|+||+ +++|.++++. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 6799998864 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------ccccccc--
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS-------SSNRNIS-- 736 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~-------~~~~~~~-- 736 (784)
++..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... .......
T Consensus 179 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 179 ARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9875432 345678999999999987 67899999999999999999999999743321100 0000000
Q ss_pred ------cccccCCCCCCCCCCC----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 737 ------LNEILDPRLPTPPQNV----QDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 737 ------~~~~~d~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....+......+.... ......+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000000000000000 011235789999999999999999999986
No 260
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.1e-37 Score=361.54 Aligned_cols=252 Identities=23% Similarity=0.393 Sum_probs=198.9
Q ss_pred HhcCCCCceeEecccceEEEEEEEc----CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLT----SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN 588 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 588 (784)
..++|++.+.||+|+||.||+|... .+..||+|.+.... .....+.|.+|+.++++++||||+++++++.+ +.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 3467899999999999999999874 35679999886532 22234679999999999999999999999854 66
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.++||||+++|+|.++++..+ ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999997643 2588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-cccccccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CC
Q 042086 669 FLKPDSS-NCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEILDP-RL 745 (784)
Q Consensus 669 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~~ 745 (784)
....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||....... ....+... +.
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--------~~~~i~~~~~~ 611 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--------VIGRIENGERL 611 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHHTCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHcCCCC
Confidence 7654322 2233456789999999998899999999999999999997 999987432211 01111111 11
Q ss_pred CCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 746 PTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 746 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
+.+ ... ...+.+++.+||+.||++|||+.++++.|
T Consensus 612 ~~~-~~~---~~~l~~li~~~l~~dP~~RPs~~el~~~L 646 (656)
T 2j0j_A 612 PMP-PNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQL 646 (656)
T ss_dssp CCC-TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCC-ccc---cHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 111 122 23578899999999999999999999864
No 261
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.2e-37 Score=335.58 Aligned_cols=199 Identities=22% Similarity=0.308 Sum_probs=170.4
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CC-----ceeeEEeEEecC
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HR-----SIVKFYGFCSHP 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 586 (784)
.++|++.+.||+|+||+||+|+.. +++.||||++... ....+++..|+.+++.++ |+ +|+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 468999999999999999999876 6889999998742 223456788999988884 54 499999999999
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec--CCCceEEecc
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC--LDYEARVSDF 664 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~~~~kl~Df 664 (784)
+..++||||+++ +|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+||
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred CceEEEEecCCC-CHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 999999999965 99999976532 3588999999999999999999952 12899999999999995 4678999999
Q ss_pred ccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCc
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDF 722 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~ 722 (784)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 206 G~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 206 GSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999876432 3456789999999999999999999999999999999999999974
No 262
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-37 Score=331.48 Aligned_cols=245 Identities=22% Similarity=0.333 Sum_probs=200.8
Q ss_pred HHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCC---CCChhhHHHHHHHHhccC--CCceeeEEeEEec
Q 042086 512 RATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCE---MVPQPEFVNEIKTLTELR--HRSIVKFYGFCSH 585 (784)
Q Consensus 512 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 585 (784)
...++|++.+.||+|+||.||+|+.. +++.||||++....... ....+.+.+|+.++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34578999999999999999999865 78999999987643221 123356788999999996 5999999999999
Q ss_pred CCceEEEEecccC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec-CCCceEEec
Q 042086 586 PRNSFLVYEYLER-GSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC-LDYEARVSD 663 (784)
Q Consensus 586 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~D 663 (784)
++..++|+|++.+ ++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 9999999999986 89999997643 578899999999999999999999 999999999999999 779999999
Q ss_pred cccccccCCCCCcccccccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC
Q 042086 664 FGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKV-TEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILD 742 (784)
Q Consensus 664 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d 742 (784)
||+++..... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||+...... .
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--------------~ 257 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII--------------R 257 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--------------H
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh--------------c
Confidence 9999876532 2345678999999999987766 678999999999999999999997432211 0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 743 PRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 743 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.....+ ... ..++.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~-~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 258 GQVFFR-QRV---SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCCCS-SCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccc-ccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 111 235788999999999999999999986
No 263
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.2e-37 Score=338.38 Aligned_cols=256 Identities=20% Similarity=0.305 Sum_probs=194.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCce---
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNS--- 589 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 589 (784)
.++|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 457999999999999999999876 789999999876422 222346788999999999999999999999876654
Q ss_pred ---EEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccc
Q 042086 590 ---FLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGI 666 (784)
Q Consensus 590 ---~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 666 (784)
++||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 589888743 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------cccccc--
Q 042086 667 AKFLKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-------SNRNIS-- 736 (784)
Q Consensus 667 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-------~~~~~~-- 736 (784)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ......
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 9865432 345678999999999987 678999999999999999999999997432111000 000000
Q ss_pred ------cccccCCCCCCCCCC----CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 737 ------LNEILDPRLPTPPQN----VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 737 ------~~~~~d~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...........+... .......+.+++.+||+.||++|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000000000000000 0112346889999999999999999999986
No 264
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.1e-37 Score=341.81 Aligned_cols=251 Identities=23% Similarity=0.318 Sum_probs=187.4
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 593 (784)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+++..++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 345567889999999998777778999999998642 245688999999887 8999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCC-------------
Q 042086 594 EYLERGSLATILSNDGAIEE----FNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLD------------- 656 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~------------- 656 (784)
||+. |+|.+++........ .++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 599999976543211 12334578999999999999999 99999999999999754
Q ss_pred CceEEeccccccccCCCCCc----cccccccccccccccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 042086 657 YEARVSDFGIAKFLKPDSSN----CTELVGTFGYIAPELVYT-------MKVTEKCDVYSFGVLALEVIK-GDHPRDFIS 724 (784)
Q Consensus 657 ~~~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslGv~l~ellt-g~~p~~~~~ 724 (784)
+.+||+|||+++.+...... .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||+...
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999987643322 234579999999999975 668899999999999999999 999986322
Q ss_pred cccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 725 SISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 725 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
.... ............ ..........++.+++.+||+.||++|||+.+|++
T Consensus 245 ~~~~------~i~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRES------NIIRGIFSLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THHH------HHHHTCCCCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhHH------HHhcCCCCcccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1100 000001110000 11122345667899999999999999999999986
No 265
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.3e-38 Score=332.77 Aligned_cols=258 Identities=21% Similarity=0.308 Sum_probs=190.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe--------
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS-------- 584 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-------- 584 (784)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 367999999999999999999987 5899999988653 2234567899999999999999999999873
Q ss_pred ------cCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec-CCC
Q 042086 585 ------HPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC-LDY 657 (784)
Q Consensus 585 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~ 657 (784)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++ +++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 599999864 2578899999999999999999999 999999999999997 567
Q ss_pred ceEEeccccccccCCCC---Cccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc---
Q 042086 658 EARVSDFGIAKFLKPDS---SNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS--- 730 (784)
Q Consensus 658 ~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~--- 730 (784)
.+||+|||+++...... .......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||..........
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998765322 12334567899999998865 678999999999999999999999997433211000
Q ss_pred ----ccccccccccc-------CCCCCCCCC----CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 731 ----SNRNISLNEIL-------DPRLPTPPQ----NVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 731 ----~~~~~~~~~~~-------d~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
........++. ......+.. .......++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000000000 000000000 00112346889999999999999999999986
No 266
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=327.48 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=193.0
Q ss_pred HHHHhcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCC---CChhhHHHHHHHHhcc----CCCceeeEEe
Q 042086 510 IVRATNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEM---VPQPEFVNEIKTLTEL----RHRSIVKFYG 581 (784)
Q Consensus 510 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l----~h~niv~l~~ 581 (784)
.....++|++.+.||+|+||.||+|+.. +++.||||++........ .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999865 789999999976432211 2234567899999988 8999999999
Q ss_pred EEecCCceEEEEec-ccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec-CCCce
Q 042086 582 FCSHPRNSFLVYEY-LERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC-LDYEA 659 (784)
Q Consensus 582 ~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~ 659 (784)
++.+.+..++|+|| +.+++|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99998999999999 78999999997643 488999999999999999999999 999999999999999 88999
Q ss_pred EEeccccccccCCCCCcccccccccccccccccccCCcC-cchhHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042086 660 RVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVT-EKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLN 738 (784)
Q Consensus 660 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 738 (784)
||+|||+++..... ......|++.|+|||.+.+..+. .++||||||+++|||++|+.||+.....
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------ 245 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------ 245 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------
Confidence 99999999876543 23456789999999999877664 4899999999999999999998743211
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHh
Q 042086 739 EILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQL 783 (784)
Q Consensus 739 ~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~~ 783 (784)
.......+. . ....+.+++.+||+.||++|||++|+++.
T Consensus 246 --~~~~~~~~~-~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 246 --LEAELHFPA-H---VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --HHTCCCCCT-T---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --hhhccCCcc-c---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111 1 12357789999999999999999999863
No 267
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.4e-37 Score=330.40 Aligned_cols=256 Identities=23% Similarity=0.313 Sum_probs=178.0
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHH-HHhccCCCceeeEEeEEecCCceEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIK-TLTELRHRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~l 591 (784)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++||||+++++++.+++..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 367999999999999999999975 789999999875421 122345666666 6777899999999999999999999
Q ss_pred EEecccCCCHHHHHhcC--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 592 VYEYLERGSLATILSND--GAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
||||+++ +|.+++... .....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999986 888877531 11246888999999999999999999852 899999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccccc----ccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042086 670 LKPDSSNCTELVGTFGYIAPELV----YTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRL 745 (784)
Q Consensus 670 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~ 745 (784)
..... ......||+.|+|||.+ .+..++.++|||||||++|||++|+.||....... .....+.....
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~ 247 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQVVKGDP 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHHHhcCCC
Confidence 65332 23344789999999998 45668899999999999999999999997432210 01111111111
Q ss_pred CCC-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 746 PTP-PQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 746 ~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
+.. ..........+.+++.+||+.||++|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 110 0011122336889999999999999999999975
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.9e-37 Score=333.44 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=196.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecC-----C
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHP-----R 587 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 587 (784)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .......+.+|+.++++++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 467999999999999999999976 78999999986431 222345788999999999999999999998654 6
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
..++||||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999997 5999998753 588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc----------cccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCcccccccc-------
Q 042086 668 KFLKPDSSN----------CTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSS------- 729 (784)
Q Consensus 668 ~~~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~------- 729 (784)
+.+...... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876532211 223578999999998764 67899999999999999999999999743211000
Q ss_pred -ccccccc--------cccccCCCCCCCCCC-----CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 730 -SSNRNIS--------LNEILDPRLPTPPQN-----VQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 730 -~~~~~~~--------~~~~~d~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
....... ..+.+. ..+..+.. ......++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIK-SLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHH-TSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCchhccccccccchhhHHhh-cccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 000000 00000000 0112346789999999999999999999986
No 269
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.1e-37 Score=354.16 Aligned_cols=262 Identities=26% Similarity=0.315 Sum_probs=201.5
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEec------C
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSH------P 586 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 586 (784)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+.++++++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 368999999999999999999875 68999999987532 22335679999999999999999999999755 6
Q ss_pred CceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCc---eEEec
Q 042086 587 RNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYE---ARVSD 663 (784)
Q Consensus 587 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~D 663 (784)
+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 67899999999999999998765545688899999999999999999999 9999999999999997764 99999
Q ss_pred cccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccc-cc-----cccccccc
Q 042086 664 FGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSIS-SS-----SSNRNISL 737 (784)
Q Consensus 664 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~-~~-----~~~~~~~~ 737 (784)
||++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .. ........
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765432 3355689999999999999999999999999999999999999986321100 00 00000000
Q ss_pred c------cccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 042086 738 N------EILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVC 781 (784)
Q Consensus 738 ~------~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl 781 (784)
. ..+....+.+..........+.+++..||+.||++|||+.+++
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0 0111222222233444566789999999999999999998754
No 270
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=339.11 Aligned_cols=248 Identities=22% Similarity=0.306 Sum_probs=186.8
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 592 (784)
..+|++.+.||+|+||+||.....+++.||||++... ..+.+.+|+.+++.+ +|||||++++++.+....++|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE------CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT------TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 3468889999999999977655667999999998652 234567899999999 899999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---C--CceEEeccccc
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---D--YEARVSDFGIA 667 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~--~~~kl~DfG~a 667 (784)
|||+. |+|.+++..... ...+..+..++.||+.||+|||+. +|+||||||+||+++. + ..+||+|||++
T Consensus 97 ~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99997 599999976542 233345678999999999999999 9999999999999953 2 35889999999
Q ss_pred cccCCCC---Ccccccccccccccccccc---cCCcCcchhHHHHHHHHHHHHh-CCCCCCccccccccccccccccccc
Q 042086 668 KFLKPDS---SNCTELVGTFGYIAPELVY---TMKVTEKCDVYSFGVLALEVIK-GDHPRDFISSISSSSSNRNISLNEI 740 (784)
Q Consensus 668 ~~~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 740 (784)
+...... .......||+.|+|||++. ...++.++|||||||++|||++ |..||........ ...
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---------~~~ 241 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---------NIL 241 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---------HHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---------HHH
Confidence 8765432 2234567999999999997 4567889999999999999999 9999853211100 000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 741 LDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 741 ~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..................+.+++.+||+.||++|||++||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 100000001111234456789999999999999999999985
No 271
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=333.46 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=193.6
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc-----
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN----- 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 588 (784)
++|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 57999999999999999999875 799999999876321 22234678899999999999999999999977654
Q ss_pred -eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 589 -SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 589 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
.++||||++ |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999998 588887642 488899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCCccccccccc-------ccccccc--
Q 042086 668 KFLKPDSSNCTELVGTFGYIAPELVYT-MKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSS-------SNRNISL-- 737 (784)
Q Consensus 668 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~-------~~~~~~~-- 737 (784)
+..... .....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .......
T Consensus 174 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 174 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred cCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 865432 344578999999999876 678899999999999999999999997433210000 0000000
Q ss_pred ----------ccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 738 ----------NEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 738 ----------~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+-.................+.+++.+|++.||++|||++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000111122346889999999999999999999986
No 272
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8.9e-37 Score=329.85 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=198.7
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CC-CEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc------eeeEEeEEec
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SG-EILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS------IVKFYGFCSH 585 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~ 585 (784)
.++|++.+.||+|+||.||+|+.. ++ +.||+|++... ....+.+.+|+.+++.++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 368999999999999999999875 44 78999998642 223567889999999997766 9999999999
Q ss_pred CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee------------
Q 042086 586 PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL------------ 653 (784)
Q Consensus 586 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill------------ 653 (784)
.+..++||||+ ++++.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 5678777765432 3588999999999999999999999 99999999999999
Q ss_pred -------cCCCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 042086 654 -------CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSI 726 (784)
Q Consensus 654 -------~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~ 726 (784)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999875432 24567899999999999999999999999999999999999999743221
Q ss_pred ccc-------ccccc------cccccccCCC-------------------CCCCCCCCHHHHHHHHHHHHhcccCCCCCC
Q 042086 727 SSS-------SSNRN------ISLNEILDPR-------------------LPTPPQNVQDELISIVEVAFLCLNESPESR 774 (784)
Q Consensus 727 ~~~-------~~~~~------~~~~~~~d~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 774 (784)
... ..... .......... ..............+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 000 00000 0000000000 000001122345578899999999999999
Q ss_pred CCHHHHHH
Q 042086 775 PPMHTVCQ 782 (784)
Q Consensus 775 Ps~~~vl~ 782 (784)
||+.|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999985
No 273
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=338.35 Aligned_cols=321 Identities=21% Similarity=0.216 Sum_probs=229.6
Q ss_pred cEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCC
Q 042086 80 STLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGN 159 (784)
Q Consensus 80 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (784)
+.++.++++++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45667776666 3344332 35556666666655555555555555555555555555555555555555555555555
Q ss_pred CcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCC
Q 042086 160 SLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPL 239 (784)
Q Consensus 160 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 239 (784)
.+++..+..|.++++|++|+|++|.+. +..+..|.++++|+.|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIV------------------------ILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCC------------------------EECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred cCCccCcccccCCCCCCEEECCCCccc------------------------cCChhHccccccCCEEECCCCccceeChh
Confidence 555433344444555555555555444 44444555555555555555555555555
Q ss_pred CCcCCCCcceEEecCCCCCCCCcc-cccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccc
Q 042086 240 SIGNLNNLIGLYLYDNQLSVGEIP-IEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLL 318 (784)
Q Consensus 240 ~l~~l~~L~~L~L~~n~l~~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 318 (784)
.|.++++|++|+|++|+++ .++ ..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....
T Consensus 147 ~~~~l~~L~~L~l~~n~l~--~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 224 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLT--SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL 224 (477)
T ss_dssp SSTTCTTCCEEEEESCCCS--SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC
T ss_pred hccCCCCCCEEECCCCcCc--ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCc
Confidence 6666666666666666665 233 3467788888888888888887788899999999999999998888888877778
Q ss_pred cceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcC
Q 042086 319 KLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVS 398 (784)
Q Consensus 319 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~ 398 (784)
+|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|+
T Consensus 225 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 225 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp CCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred cccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 99999999999998766789999999999999999998888889999999999999999999999999999999999999
Q ss_pred CCCCcccCCCC-CCCcCCCcccccCCCCCCCC
Q 042086 399 YNELRGPIPNS-RIFQYDPMEALQGNKGLCGD 429 (784)
Q Consensus 399 ~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~ 429 (784)
+|++++..+.. ..+.......+.+|++.|.-
T Consensus 305 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 305 GNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp SSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 99999844432 22344555677889888763
No 274
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.9e-37 Score=335.14 Aligned_cols=258 Identities=22% Similarity=0.269 Sum_probs=197.6
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-----------CCceeeEEe
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-----------HRSIVKFYG 581 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~ 581 (784)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 357999999999999999999874 7899999998742 223567889999999886 899999999
Q ss_pred EEecCC----ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeec---
Q 042086 582 FCSHPR----NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLC--- 654 (784)
Q Consensus 582 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--- 654 (784)
++...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 997644 688999999 8899999976432 35888999999999999999999953 899999999999995
Q ss_pred ---CCCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCcccccccccc
Q 042086 655 ---LDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSS 731 (784)
Q Consensus 655 ---~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~ 731 (784)
..+.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||+..........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 3447999999999876432 2345789999999999999999999999999999999999999974321100000
Q ss_pred -----------------------------ccccccccccCCCC-------CCCCCCCHHHHHHHHHHHHhcccCCCCCCC
Q 042086 732 -----------------------------NRNISLNEILDPRL-------PTPPQNVQDELISIVEVAFLCLNESPESRP 775 (784)
Q Consensus 732 -----------------------------~~~~~~~~~~d~~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 775 (784)
........+..... ............++.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 00000000000000 000112345667899999999999999999
Q ss_pred CHHHHHH
Q 042086 776 PMHTVCQ 782 (784)
Q Consensus 776 s~~~vl~ 782 (784)
|++|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999986
No 275
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.7e-35 Score=330.21 Aligned_cols=336 Identities=29% Similarity=0.413 Sum_probs=260.6
Q ss_pred CeEEEEeCCCcc-----cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCC
Q 042086 61 RVISINLSTVGL-----KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN 135 (784)
Q Consensus 61 ~v~~l~l~~~~~-----~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 135 (784)
+++.+++.+.++ ...+++|++|+|++|.+++..+ +.++++|++|+|++|.+++..+ ++++++|++|+|++|
T Consensus 47 ~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 122 (466)
T 1o6v_A 47 QVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122 (466)
T ss_dssp TCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred cccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCC
Confidence 445555554433 2467889999999999987655 8999999999999999986655 899999999999999
Q ss_pred ccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccch
Q 042086 136 QLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPS 215 (784)
Q Consensus 136 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 215 (784)
.+++..+ +..+++|++|++++|.+++. + .+..+++|++|+++ |.+.+.. .+.++++|+.|++++|.+... .
T Consensus 123 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~ 193 (466)
T 1o6v_A 123 QITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--S 193 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--G
T ss_pred CCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--h
Confidence 9986533 88999999999999998853 3 47888888888886 4555333 378888889999988888654 3
Q ss_pred hhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCc
Q 042086 216 ILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTE 295 (784)
Q Consensus 216 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 295 (784)
.+..+++|++|++++|.+++..+ ++.+++|++|++++|+++ .++ .+..+++|+.|++++|.+++..+ +..+++
T Consensus 194 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~--~~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 266 (466)
T 1o6v_A 194 VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK--DIG-TLASLTNLTDLDLANNQISNLAP--LSGLTK 266 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC--CCG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc--cch-hhhcCCCCCEEECCCCccccchh--hhcCCC
Confidence 47888888888888888886655 677888888888888886 333 57788888888888888886544 778888
Q ss_pred cceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCC
Q 042086 296 LEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSH 375 (784)
Q Consensus 296 L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 375 (784)
|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++
T Consensus 267 L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 267 LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 8888888888886544 7788888888888888887443 7888888888888888887665 67888888888888
Q ss_pred CccCCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcccccCCCC
Q 042086 376 NNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNKG 425 (784)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 425 (784)
|++++. ..+..+++|+.|++++|++++..| ...+.......+.+|+.
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAW 387 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEE
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcc
Confidence 888876 467888888888888888888766 33333333344444443
No 276
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.5e-37 Score=326.16 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=178.2
Q ss_pred hcCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ....+.+..+..+++.++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 357899999999999999999986 7999999998754211 11123344555678888999999999999999999999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeeecCCCceEEeccccccccC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHH-DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLK 671 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 671 (784)
|||+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++..+.
T Consensus 103 ~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 556666554322 357889999999999999999998 5 89999999999999999999999999998665
Q ss_pred CCCCcccccccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042086 672 PDSSNCTELVGTFGYIAPELVY-----TMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLP 746 (784)
Q Consensus 672 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~ 746 (784)
... ......+++.|+|||.+. ...++.++|||||||++|||++|+.||....... .....+......
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~~ 248 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-------EVLTKVLQEEPP 248 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------HHHHHHHHSCCC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-------HHHHHHhccCCC
Confidence 332 234457899999999994 4568889999999999999999999997422110 001111111111
Q ss_pred CCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 747 TPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 747 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
..+. .......+.+++.+||+.||++|||++++++
T Consensus 249 ~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 LLPG-HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCS-SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCc-cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1100 0012235788999999999999999999975
No 277
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.6e-35 Score=316.27 Aligned_cols=306 Identities=27% Similarity=0.418 Sum_probs=268.8
Q ss_pred CCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcE
Q 042086 74 GNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAV 153 (784)
Q Consensus 74 ~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 153 (784)
..+++|++|++++|+++.. + .+..+++|++|+|++|++++..+ +..+++|++|++++|.+++. +.+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 3578899999999999854 3 58999999999999999986543 99999999999999999853 46999999999
Q ss_pred EeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcc
Q 042086 154 LHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL 233 (784)
Q Consensus 154 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 233 (784)
|+|++|.+++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 9999999996533 8899999999999997664444 48999999999999999986554 88999999999999999
Q ss_pred ccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccc
Q 042086 234 SGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPET 313 (784)
Q Consensus 234 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 313 (784)
++..+ +..+++|+.|++++|.+. .++. +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~--~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~ 260 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQIT--DITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NA 260 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCC--CCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GG
T ss_pred ccccc--ccCCCccceeecccCCCC--CCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hh
Confidence 86544 889999999999999987 3332 8889999999999999986544 88999999999999999864 57
Q ss_pred ccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccce
Q 042086 314 LGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLS 393 (784)
Q Consensus 314 l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 393 (784)
+..+++|++|++++|++++. ..+..+++|+.|++++|++.+..|..+..+++|+.|+|++|++++..| +..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 336 (347)
T 4fmz_A 261 VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMD 336 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCS
T ss_pred HhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccc
Confidence 89999999999999999984 568999999999999999999999999999999999999999999877 88999999
Q ss_pred EEEcCCCCCc
Q 042086 394 CIDVSYNELR 403 (784)
Q Consensus 394 ~l~l~~N~l~ 403 (784)
.|++++|+++
T Consensus 337 ~L~l~~N~i~ 346 (347)
T 4fmz_A 337 SADFANQVIK 346 (347)
T ss_dssp EESSSCC---
T ss_pred eeehhhhccc
Confidence 9999999875
No 278
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.2e-36 Score=314.36 Aligned_cols=229 Identities=13% Similarity=0.076 Sum_probs=180.1
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 593 (784)
++|++.+.||+|+||.||+|+.. +++.||||++...........+.|.+|+.+++.++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999976 58999999998654333333478999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||+++++|.++++.. .....+.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999999542 24456788999999999999999 99999999999999999999998543
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCH
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQ 753 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 753 (784)
|++| ++.++|||||||++|||+||+.||.......... .....+......+.....
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 230 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-----PAERDTAGQPIEPADIDR 230 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-----ECCBCTTSCBCCHHHHCT
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-----HHHHHhccCCCChhhccc
Confidence 3333 6789999999999999999999997433211000 000111111111000011
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHhC
Q 042086 754 DELISIVEVAFLCLNESPESRPPMHTVCQLL 784 (784)
Q Consensus 754 ~~~~~l~~li~~cl~~dP~~RPs~~~vl~~L 784 (784)
....++.+++.+||+.||++| |+.|+++.|
T Consensus 231 ~~~~~l~~li~~~l~~dP~~R-s~~el~~~L 260 (286)
T 3uqc_A 231 DIPFQISAVAARSVQGDGGIR-SASTLLNLM 260 (286)
T ss_dssp TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHH
T ss_pred CCCHHHHHHHHHHcccCCccC-CHHHHHHHH
Confidence 123358899999999999999 999999864
No 279
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-35 Score=310.95 Aligned_cols=230 Identities=21% Similarity=0.318 Sum_probs=178.9
Q ss_pred cCCCCc-eeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHH-hccCCCceeeEEeEEec----CC
Q 042086 515 NGFDVK-YCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTL-TELRHRSIVKFYGFCSH----PR 587 (784)
Q Consensus 515 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 587 (784)
++|.+. +.||+|+||.||+|... +++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 567776 78999999999999875 789999999853 35678999988 55599999999999876 66
Q ss_pred ceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecC---CCceEEecc
Q 042086 588 NSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCL---DYEARVSDF 664 (784)
Q Consensus 588 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~Df 664 (784)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 78999999999999999986532 3589999999999999999999999 9999999999999998 788999999
Q ss_pred ccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042086 665 GIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPR 744 (784)
Q Consensus 665 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~ 744 (784)
|++.... +..++.++|||||||++|||++|+.||......... ......+....
T Consensus 165 g~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----~~~~~~~~~~~ 218 (299)
T 3m2w_A 165 GFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMGQ 218 (299)
T ss_dssp TTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCSCCSSCTTC
T ss_pred ccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----HHHHHHHhhcc
Confidence 9987543 134678999999999999999999999643221100 00001111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 745 LPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 745 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
...+.........++.+++.+||+.||++|||+.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11110000112346889999999999999999999986
No 280
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-35 Score=325.79 Aligned_cols=244 Identities=14% Similarity=0.096 Sum_probs=181.9
Q ss_pred cCCCCceeEecccceEEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCC-Ccee---------e-----
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH-RSIV---------K----- 578 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv---------~----- 578 (784)
..|...+.||+|+||+||+|++. +|+.||||++...........+.|.+|+.+++.++| +|.. .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 35778899999999999999965 799999999885544444557889999999999977 2211 1
Q ss_pred -------EEeEEec-----CCceEEEEecccCCCHHHHHhc----CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 042086 579 -------FYGFCSH-----PRNSFLVYEYLERGSLATILSN----DGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIV 642 (784)
Q Consensus 579 -------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 642 (784)
+..++.. ....+++|+++ +++|.++++. ......+++..+..++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1111111 12356777765 5799998841 12234578889999999999999999999 999
Q ss_pred EeCCCCCCeeecCCCceEEeccccccccCCCCCccccccccccccccccc----------ccCCcCcchhHHHHHHHHHH
Q 042086 643 HRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELV----------YTMKVTEKCDVYSFGVLALE 712 (784)
Q Consensus 643 H~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwslGv~l~e 712 (784)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999865432 344567 999999999 55568889999999999999
Q ss_pred HHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 042086 713 VIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCLNESPESRPPMHTVCQ 782 (784)
Q Consensus 713 lltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl~ 782 (784)
|++|+.||...... .....++.... . . ...+.+++.+||+.||++||++.++++
T Consensus 310 lltg~~Pf~~~~~~--------~~~~~~~~~~~----~-~---~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAAL--------GGSEWIFRSCK----N-I---PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGG--------SCSGGGGSSCC----C-C---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchh--------hhHHHHHhhcc----c-C---CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999743221 11111221111 1 1 135888999999999999999988864
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.3e-35 Score=319.56 Aligned_cols=313 Identities=20% Similarity=0.157 Sum_probs=275.3
Q ss_pred CCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCcccccccccee
Q 042086 99 NLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYL 178 (784)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 178 (784)
.+.+|++|++++|.++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46899999999999997666668999999999999999998888899999999999999999998888999999999999
Q ss_pred eccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCC
Q 042086 179 HLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLS 258 (784)
Q Consensus 179 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 258 (784)
+|++|.++...+..|.++++|++|++++|++++..+..+.++++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999965555679999999999999999988889999999999999999999865 3677899999999999987
Q ss_pred CCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhh
Q 042086 259 VGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVEL 338 (784)
Q Consensus 259 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 338 (784)
.+...++|++|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+
T Consensus 200 ------~~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 268 (390)
T 3o6n_A 200 ------TLAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF 268 (390)
T ss_dssp ------EEECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred ------ccCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHc
Confidence 344557899999999999854 433 357999999999999864 688999999999999999999889999
Q ss_pred hcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcc
Q 042086 339 EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPME 418 (784)
Q Consensus 339 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~ 418 (784)
..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++ +|..+..+++|+.|++++|+++.. | ...+......
T Consensus 269 ~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~-~~~~~~L~~L 344 (390)
T 3o6n_A 269 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K-LSTHHTLKNL 344 (390)
T ss_dssp TTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C-CCTTCCCSEE
T ss_pred cccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee-C-chhhccCCEE
Confidence 999999999999999994 67777889999999999999995 566788899999999999999864 3 3345556666
Q ss_pred cccCCCCCCCC
Q 042086 419 ALQGNKGLCGD 429 (784)
Q Consensus 419 ~~~~n~~~c~~ 429 (784)
.+.+|++.|..
T Consensus 345 ~l~~N~~~~~~ 355 (390)
T 3o6n_A 345 TLSHNDWDCNS 355 (390)
T ss_dssp ECCSSCEEHHH
T ss_pred EcCCCCccchh
Confidence 77888877753
No 282
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-35 Score=348.15 Aligned_cols=233 Identities=25% Similarity=0.335 Sum_probs=188.9
Q ss_pred cCCCCceeEecccceEEEEEEEc--CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEecCCc----
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLT--SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRN---- 588 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 588 (784)
++|++.+.||+|+||.||+|++. +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 68999999999999999999975 68999999986532 22234678999999999999999999999987655
Q ss_pred -eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccc
Q 042086 589 -SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIA 667 (784)
Q Consensus 589 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 667 (784)
.++||||+++++|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||++
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999987753 588999999999999999999999 99999999999999875 8999999999
Q ss_pred cccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042086 668 KFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPT 747 (784)
Q Consensus 668 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 747 (784)
+..... ....||++|+|||++.+.. +.++|||||||++|||++|..||..... + .++.
T Consensus 229 ~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~-~~~~ 286 (681)
T 2pzi_A 229 SRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------D-GLPE 286 (681)
T ss_dssp EETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------------S-SCCT
T ss_pred hhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------------c-cccc
Confidence 876543 4457999999999987654 8899999999999999999988752110 0 0000
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 042086 748 PPQNVQDELISIVEVAFLCLNESPESRPPMHTVC 781 (784)
Q Consensus 748 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~~vl 781 (784)
..........+.+++.+||+.||++||+..+.+
T Consensus 287 -~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l 319 (681)
T 2pzi_A 287 -DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEM 319 (681)
T ss_dssp -TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred -cccccccCHHHHHHHhhhccCChhhCCCHHHHH
Confidence 011112235688999999999999999755544
No 283
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.2e-34 Score=321.42 Aligned_cols=317 Identities=30% Similarity=0.418 Sum_probs=278.0
Q ss_pred CCeEEEEeCCCcc-----cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccC
Q 042086 60 KRVISINLSTVGL-----KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134 (784)
Q Consensus 60 ~~v~~l~l~~~~~-----~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 134 (784)
.++..+++.+..+ .+.+++|++|+|++|.+++..+ ++++++|++|+|++|.+++..+ ++.+++|++|++++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 143 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 143 (466)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEE
T ss_pred cCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCC
Confidence 3567777776544 4578999999999999997765 9999999999999999986543 99999999999999
Q ss_pred CccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccc
Q 042086 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIP 214 (784)
Q Consensus 135 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 214 (784)
|.+.+. + .+..+++|+.|+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+.+..+
T Consensus 144 n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 144 NTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc
Confidence 999863 3 58999999999997 5565443 388999999999999999854 348899999999999999987765
Q ss_pred hhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCC
Q 042086 215 SILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLT 294 (784)
Q Consensus 215 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 294 (784)
++.+++|+.|++++|++++. ..+..+++|+.|++++|+++ .++ .+..+++|+.|++++|.+++..+ +..++
T Consensus 217 --~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~--~~~-~~~~l~~L~~L~l~~n~l~~~~~--~~~l~ 287 (466)
T 1o6v_A 217 --LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS--NLA-PLSGLTKLTELKLGANQISNISP--LAGLT 287 (466)
T ss_dssp --GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC--CCG-GGTTCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred --ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccc--cch-hhhcCCCCCEEECCCCccCcccc--ccCCC
Confidence 78899999999999999864 46889999999999999997 333 38899999999999999996544 88999
Q ss_pred ccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecC
Q 042086 295 ELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLS 374 (784)
Q Consensus 295 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 374 (784)
+|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|+++
T Consensus 288 ~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 361 (466)
T 1o6v_A 288 ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAG 361 (466)
T ss_dssp TCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECC
T ss_pred ccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCC
Confidence 99999999999997554 8899999999999999998665 88999999999999999965 478999999999999
Q ss_pred CCccCCCCcccccCcccceEEEcCCCCCcc
Q 042086 375 HNNFSGLIPSCFEGMHGLSCIDVSYNELRG 404 (784)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 404 (784)
+|++++..| +..+++|+.|++++|++++
T Consensus 362 ~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 362 HNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp SSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCccCccch--hhcCCCCCEEeccCCcccC
Confidence 999999887 8999999999999999998
No 284
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.9e-34 Score=333.39 Aligned_cols=332 Identities=23% Similarity=0.234 Sum_probs=266.5
Q ss_pred CCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccc
Q 042086 93 IPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNL 172 (784)
Q Consensus 93 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 172 (784)
+|..+- +++++|+|++|+|++..+.+|+++++|++|+|++|+|++..|.+|.++++|++|+|++|+|++..+..|.++
T Consensus 46 vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L 123 (635)
T 4g8a_A 46 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 123 (635)
T ss_dssp CCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTC
T ss_pred cCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCC
Confidence 555442 479999999999998888999999999999999999998888899999999999999999998777889999
Q ss_pred cccceeeccccccCCCccccccCccCCceeeccccccCCc-cchhhhcccccceeccCCCccccccCCCCcCCC------
Q 042086 173 KSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGS-IPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLN------ 245 (784)
Q Consensus 173 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~------ 245 (784)
++|++|+|++|++++..+..|+++++|++|+|++|.++.. .|..++.+++|++|+|++|++++..+..|..+.
T Consensus 124 ~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~ 203 (635)
T 4g8a_A 124 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 203 (635)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCC
T ss_pred CCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhh
Confidence 9999999999999987777899999999999999999764 678899999999999999998765544332221
Q ss_pred --------------------------------------------------------------------------------
Q 042086 246 -------------------------------------------------------------------------------- 245 (784)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (784)
T Consensus 204 ~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~ 283 (635)
T 4g8a_A 204 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 283 (635)
T ss_dssp CEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEE
T ss_pred hhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhh
Confidence
Q ss_pred ---------------------------------------------CcceEEecCCCCCCC------------------Cc
Q 042086 246 ---------------------------------------------NLIGLYLYDNQLSVG------------------EI 262 (784)
Q Consensus 246 ---------------------------------------------~L~~L~L~~n~l~~~------------------~~ 262 (784)
+|+.|++.+|.+... ..
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~ 363 (635)
T 4g8a_A 284 EEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN 363 (635)
T ss_dssp EEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCC
T ss_pred hhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCC
Confidence 122222222222100 00
Q ss_pred ccccccccccceEeccCccccCC-------------------------CCccccCCCccceeecccCccCCCCc-ccccc
Q 042086 263 PIEIGKLSSLNYLVLNGNQLYGN-------------------------LPRALGSLTELEYLDLSTNKLGNSIP-ETLGN 316 (784)
Q Consensus 263 ~~~l~~l~~L~~L~l~~n~l~~~-------------------------~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~l~~ 316 (784)
+.....+++|+.|++++|.+... .+..+..+++|+.++++.|+.....+ ..+..
T Consensus 364 ~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~ 443 (635)
T 4g8a_A 364 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 443 (635)
T ss_dssp BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTT
T ss_pred Ccccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccc
Confidence 00112356788888888776421 23456678999999999988776544 56789
Q ss_pred cccceEEecccccccCCCchhhhcccccCeeccCCcccc-ccccccccccccccEEecCCCccCCCCcccccCcccceEE
Q 042086 317 LLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILE-GKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCI 395 (784)
Q Consensus 317 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l 395 (784)
+++++.++++.|.+.+..+..+..++.|+.|+|++|.+. +..|..|..+++|+.|+|++|++++.+|..|.++++|+.|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 999999999999999999999999999999999999754 4678899999999999999999999999999999999999
Q ss_pred EcCCCCCcccCCCC-CCCcCCCcccccCCCCC
Q 042086 396 DVSYNELRGPIPNS-RIFQYDPMEALQGNKGL 426 (784)
Q Consensus 396 ~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~ 426 (784)
+|++|++++..|.. ..........+.+|...
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCC
Confidence 99999999866542 22334444556666443
No 285
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.9e-34 Score=318.27 Aligned_cols=302 Identities=21% Similarity=0.256 Sum_probs=257.4
Q ss_pred CCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcE
Q 042086 74 GNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAV 153 (784)
Q Consensus 74 ~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 153 (784)
+++++|++|+|++|+|++. | .|+.+++|++|+|++|++++. | ++.+++|++|+|++|.+++. + ++.+++|++
T Consensus 39 ~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp HHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred hHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 4678899999999999975 5 799999999999999999974 4 89999999999999999975 3 889999999
Q ss_pred EeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcc
Q 042086 154 LHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL 233 (784)
Q Consensus 154 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 233 (784)
|+|++|.+++ ++ ++++++|++|++++|++++. + ++.+++|+.|++++|+..+.+ .+..+++|+.|++++|++
T Consensus 111 L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 111 LNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp EECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcc
Confidence 9999999996 44 88999999999999999964 3 888999999999999655555 478899999999999999
Q ss_pred ccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccc
Q 042086 234 SGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPET 313 (784)
Q Consensus 234 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 313 (784)
++. | +..+++|+.|++++|+++. + .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..
T Consensus 183 ~~l-~--l~~l~~L~~L~l~~N~l~~--~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 183 TEL-D--VSQNKLLNRLNCDTNNITK--L--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp CCC-C--CTTCTTCCEEECCSSCCSC--C--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred cee-c--cccCCCCCEEECcCCcCCe--e--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHH
Confidence 974 4 8889999999999999983 3 47888999999999999997 55 888999999999999999876666
Q ss_pred ccccc-------cceEEecccccccCCCchhhhcccccCeeccCCccccccccc--------cccccccccEEecCCCcc
Q 042086 314 LGNLL-------KLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPC--------EICNMESLEKLNLSHNNF 378 (784)
Q Consensus 314 l~~l~-------~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------~~~~l~~L~~L~L~~N~l 378 (784)
+.++. +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .+..+++|+.|++++|++
T Consensus 253 l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l 330 (457)
T 3bz5_A 253 LSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTEL 330 (457)
T ss_dssp CTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCC
T ss_pred CCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcc
Confidence 66554 56677777777766565 57789999999999988777764 255668999999999999
Q ss_pred CCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 379 SGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 379 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
++. + +..+++|+.|++++|++++ +|
T Consensus 331 ~~l-~--l~~l~~L~~L~l~~N~l~~-l~ 355 (457)
T 3bz5_A 331 TEL-D--VSHNTKLKSLSCVNAHIQD-FS 355 (457)
T ss_dssp SCC-C--CTTCTTCSEEECCSSCCCB-CT
T ss_pred ccc-c--cccCCcCcEEECCCCCCCC-cc
Confidence 995 3 8899999999999999998 44
No 286
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.5e-35 Score=315.57 Aligned_cols=281 Identities=21% Similarity=0.233 Sum_probs=191.7
Q ss_pred hHHHHHHHHHHHhccCCCccccCCCCCCCCCCCccccccCCCCCCCcccceeEEcCCCCeEEEEeCCCcccCCCCcccEE
Q 042086 3 GKEAYALLKWKTSLQKHNRSLLSSWTFYPVNNATNVSFYSKIKISPCAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTL 82 (784)
Q Consensus 3 ~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~~~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L 82 (784)
.+|+.||++||+++..|+++.+++|.... ....++|.|.|++|+..... + .......++.|
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~-----------~~~~~~~~~~g~~~~~~~~~----l----~~~~~~~l~~L 86 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQAN-----------SNNPQIETRTGRALKATADL----L----EDATQPGRVAL 86 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHT-----------TTCTTSCCSHHHHHHHHHHH----H----HHHTSTTCCEE
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccc-----------cccccccccCCcchhhhHHH----H----hcccccceeEE
Confidence 47899999999999889988888994211 12457899999999631100 0 01124567888
Q ss_pred eCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcc
Q 042086 83 DLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLS 162 (784)
Q Consensus 83 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 162 (784)
+|++|+++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+..+++|++|+|++|++.
T Consensus 87 ~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~ 163 (328)
T 4fcg_A 87 ELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPEL 163 (328)
T ss_dssp EEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTC
T ss_pred EccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCc
Confidence 88888888 67777888888888888888888 77888888888888888888888 77888888888888888888777
Q ss_pred cccCCcccc---------ccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcc
Q 042086 163 GSIPSIIGN---------LKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL 233 (784)
Q Consensus 163 ~~~~~~l~~---------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 233 (784)
+.+|..+.. +++|++|+|++|.++ .+|..+..+++|++|+|++|++++ +|..+..+++|++|+|++|.+
T Consensus 164 ~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~ 241 (328)
T 4fcg_A 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTA 241 (328)
T ss_dssp CCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTT
T ss_pred cccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcc
Confidence 777776654 555666666666555 455555555555555555555553 333455555555555555555
Q ss_pred ccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccc
Q 042086 234 SGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPET 313 (784)
Q Consensus 234 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 313 (784)
.+.+|. .+..+++|++|++++|.+.+.+|..+..+++|++|+|++|++.+.+|..
T Consensus 242 ~~~~p~-------------------------~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~ 296 (328)
T 4fcg_A 242 LRNYPP-------------------------IFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 296 (328)
T ss_dssp CCBCCC-------------------------CTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG
T ss_pred hhhhHH-------------------------HhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH
Confidence 544444 4555555666666666655666666666666666666666666666666
Q ss_pred ccccccceEEecccccccC
Q 042086 314 LGNLLKLHYLNLSNNQFRK 332 (784)
Q Consensus 314 l~~l~~L~~L~ls~N~l~~ 332 (784)
++++++|+.+++..|.+..
T Consensus 297 l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 297 IAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp GGGSCTTCEEECCGGGSCC
T ss_pred HhhccCceEEeCCHHHHHH
Confidence 6666677776666655543
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-34 Score=335.02 Aligned_cols=313 Identities=20% Similarity=0.155 Sum_probs=278.8
Q ss_pred CCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCcccccccccee
Q 042086 99 NLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYL 178 (784)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 178 (784)
.+.+++.|++++|.++...+..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 36789999999999997777778999999999999999998888899999999999999999999888899999999999
Q ss_pred eccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCC
Q 042086 179 HLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLS 258 (784)
Q Consensus 179 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 258 (784)
+|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|+.|+|++|.+++. .+..+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccc
Confidence 9999999976666789999999999999999999999999999999999999999965 3667899999999999987
Q ss_pred CCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhh
Q 042086 259 VGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVEL 338 (784)
Q Consensus 259 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 338 (784)
.+...++|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..+
T Consensus 206 ------~l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 274 (597)
T 3oja_B 206 ------TLAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPF 274 (597)
T ss_dssp ------EEECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred ------cccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHh
Confidence 445567899999999999854332 3 3689999999999986 4789999999999999999999999999
Q ss_pred hcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcc
Q 042086 339 EKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPME 418 (784)
Q Consensus 339 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~ 418 (784)
+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++.+. | ...+......
T Consensus 275 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~~~L~~L 350 (597)
T 3oja_B 275 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K-LSTHHTLKNL 350 (597)
T ss_dssp TTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C-CCTTCCCSEE
T ss_pred cCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCc-C-hhhcCCCCEE
Confidence 999999999999999995 67778889999999999999994 677789999999999999999874 3 2345556666
Q ss_pred cccCCCCCCCC
Q 042086 419 ALQGNKGLCGD 429 (784)
Q Consensus 419 ~~~~n~~~c~~ 429 (784)
.+.+|++.|..
T Consensus 351 ~l~~N~~~~~~ 361 (597)
T 3oja_B 351 TLSHNDWDCNS 361 (597)
T ss_dssp ECCSSCEEHHH
T ss_pred EeeCCCCCChh
Confidence 78899888864
No 288
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.3e-34 Score=316.59 Aligned_cols=318 Identities=19% Similarity=0.168 Sum_probs=262.9
Q ss_pred CeEEEEeCCCccc-----CCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCC
Q 042086 61 RVISINLSTVGLK-----GNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN 135 (784)
Q Consensus 61 ~v~~l~l~~~~~~-----~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 135 (784)
++..+++.+..+. +.+++|++|+|++|+|++. | ++.+++|++|+|++|.+++. + ++.+++|++|++++|
T Consensus 43 ~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N 116 (457)
T 3bz5_A 43 TLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTN 116 (457)
T ss_dssp TCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSS
T ss_pred CCCEEEccCCCcccChhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCC
Confidence 4556666654433 4678999999999999985 3 99999999999999999975 3 899999999999999
Q ss_pred ccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccch
Q 042086 136 QLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPS 215 (784)
Q Consensus 136 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 215 (784)
++++. | ++.+++|++|++++|.+++. + ++++++|++|++++|...+.+ .+..+++|+.|++++|++++. |
T Consensus 117 ~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~- 186 (457)
T 3bz5_A 117 KLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D- 186 (457)
T ss_dssp CCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-
T ss_pred cCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-
Confidence 99974 4 89999999999999999974 3 889999999999999666555 488899999999999999874 4
Q ss_pred hhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCC-
Q 042086 216 ILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLT- 294 (784)
Q Consensus 216 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~- 294 (784)
++.+++|+.|++++|++++. .++.+++|+.|++++|+++ .+| +..+++|+.|++++|++++..+..+..++
T Consensus 187 -l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~--~ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~ 258 (457)
T 3bz5_A 187 -VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT--EID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTT 258 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS--CCC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCE
T ss_pred -cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccc--ccC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCE
Confidence 88899999999999999975 4889999999999999998 355 88899999999999999987665565554
Q ss_pred ------ccceeecccCccCCCCcccccccccceEEecccccccCCCch--------hhhcccccCeeccCCccccccccc
Q 042086 295 ------ELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPV--------ELEKLIQLSELDLSLNILEGKIPC 360 (784)
Q Consensus 295 ------~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~--------~~~~l~~L~~L~Ls~N~l~~~~~~ 360 (784)
+|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .++.+++|+.|++++|++++. +
T Consensus 259 L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~- 334 (457)
T 3bz5_A 259 LHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D- 334 (457)
T ss_dssp EECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-
T ss_pred EeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-
Confidence 56777777777766665 56789999999999987665553 356778999999999999974 3
Q ss_pred cccccccccEEecCCCccCCCCccccc-------------CcccceEEEcCCCCCcccCCCC
Q 042086 361 EICNMESLEKLNLSHNNFSGLIPSCFE-------------GMHGLSCIDVSYNELRGPIPNS 409 (784)
Q Consensus 361 ~~~~l~~L~~L~L~~N~l~~~~p~~~~-------------~l~~L~~l~l~~N~l~~~~p~~ 409 (784)
++.+++|+.|++++|++++. + .+. .+..|..+++++|+++|.+|..
T Consensus 335 -l~~l~~L~~L~l~~N~l~~l-~-~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 335 -VSHNTKLKSLSCVNAHIQDF-S-SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp -CTTCTTCSEEECCSSCCCBC-T-TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCTT
T ss_pred -cccCCcCcEEECCCCCCCCc-c-ccccccccCCcEEecceeeecCccccccCcEEEEcChh
Confidence 88999999999999999974 2 111 2245677888888888888864
No 289
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.4e-34 Score=304.90 Aligned_cols=287 Identities=24% Similarity=0.282 Sum_probs=184.1
Q ss_pred CCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccc
Q 042086 103 LAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSS 182 (784)
Q Consensus 103 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 182 (784)
|+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444444444443 3333332 3444455555544444444444455555555555555444444455555555555555
Q ss_pred cccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccc--cccCCCCcCCCCcceEEecCCCCCCC
Q 042086 183 NQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLS--GVIPLSIGNLNNLIGLYLYDNQLSVG 260 (784)
Q Consensus 183 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~ 260 (784)
|.++ .+|..+. ++|++|++++|+++...+..|.++++|+.|++++|.++ +..+..+..+ +|+.|++++|+++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-- 185 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-- 185 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS--
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC--
Confidence 5554 3333332 45555555555555444445555555555555555554 2445555555 6666666666665
Q ss_pred CcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhc
Q 042086 261 EIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEK 340 (784)
Q Consensus 261 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~ 340 (784)
.+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++. +|..+..
T Consensus 186 ~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~ 262 (332)
T 2ft3_A 186 GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPD 262 (332)
T ss_dssp SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCB-CCTTGGG
T ss_pred ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCee-cChhhhc
Confidence 3444443 678888888888887777888888888888888888888777788888888888888888884 7777888
Q ss_pred ccccCeeccCCccccccccccccc------cccccEEecCCCccC--CCCcccccCcccceEEEcCCCC
Q 042086 341 LIQLSELDLSLNILEGKIPCEICN------MESLEKLNLSHNNFS--GLIPSCFEGMHGLSCIDVSYNE 401 (784)
Q Consensus 341 l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~l~l~~N~ 401 (784)
+++|+.|++++|++++..+..|.. .++|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 888999999999888766666654 367899999999987 6778889999999999998884
No 290
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.1e-33 Score=302.14 Aligned_cols=291 Identities=24% Similarity=0.281 Sum_probs=172.6
Q ss_pred cccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeec
Q 042086 78 SLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLY 157 (784)
Q Consensus 78 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 157 (784)
+++.+++++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4666677666665 2343332 455666666666665555556666666666666666665555555556666666666
Q ss_pred CCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcccccc
Q 042086 158 GNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVI 237 (784)
Q Consensus 158 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 237 (784)
+|.++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.+.. .+..
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~ 163 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGIE 163 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGBC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCcC
Confidence 65555 2333332 445555555555554444444444455555554444431 1133
Q ss_pred CCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccccccc
Q 042086 238 PLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNL 317 (784)
Q Consensus 238 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 317 (784)
+..+.++++|+.|++++|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.+++..+..+..+
T Consensus 164 ~~~~~~l~~L~~L~l~~n~l~--~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 164 NGAFQGMKKLSYIRIADTNIT--TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp TTGGGGCTTCCEEECCSSCCC--SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred hhhccCCCCcCEEECCCCccc--cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 444455555555555555544 3333332 566667777777666666667777777777777777776666667777
Q ss_pred ccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccc------cccccEEecCCCccCC--CCcccccCc
Q 042086 318 LKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICN------MESLEKLNLSHNNFSG--LIPSCFEGM 389 (784)
Q Consensus 318 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~p~~~~~l 389 (784)
++|++|+|++|+++. +|..+..+++|+.|++++|++++..+..|+. .+.|+.|++++|++.. ..|..|..+
T Consensus 240 ~~L~~L~L~~N~l~~-lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~ 318 (330)
T 1xku_A 240 PHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318 (330)
T ss_dssp TTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred CCCCEEECCCCcCcc-CChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc
Confidence 777777777777763 5666777777777777777777655555543 3677888888888753 566778888
Q ss_pred ccceEEEcCCCC
Q 042086 390 HGLSCIDVSYNE 401 (784)
Q Consensus 390 ~~L~~l~l~~N~ 401 (784)
++++.++|++|+
T Consensus 319 ~~l~~l~L~~N~ 330 (330)
T 1xku_A 319 YVRAAVQLGNYK 330 (330)
T ss_dssp CCGGGEEC----
T ss_pred cceeEEEecccC
Confidence 888888888874
No 291
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.7e-35 Score=307.82 Aligned_cols=255 Identities=31% Similarity=0.506 Sum_probs=163.4
Q ss_pred CcCcEEeecCCCccc--ccCCccccccccceeeccc-cccCCCccccccCccCCceeeccccccCCccchhhhcccccce
Q 042086 149 SNLAVLHLYGNSLSG--SIPSIIGNLKSLFYLHLSS-NQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLH 225 (784)
Q Consensus 149 ~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 225 (784)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578888888888887 7888888888888888884 8888888888888888888888888888788888888888888
Q ss_pred eccCCCccccccCCCCcCCCCcceEEecCCCCCCCCccccccccc-ccceEeccCccccCCCCccccCCCccceeecccC
Q 042086 226 LGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLS-SLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTN 304 (784)
Q Consensus 226 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 304 (784)
|+|++|++++.+|..+..+++|++|++++|+++ +.+|..+..++ +|++|++++|++++.+|..+..++ |+.|++++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRIS-GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCE-EECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCccc-CcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 888888888777776666666666666666654 34455555554 555555555555555555555554 555555555
Q ss_pred ccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcc
Q 042086 305 KLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPS 384 (784)
Q Consensus 305 ~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 384 (784)
.+++..|..+..+++|+.|+|++|++++ .+|. +..+++|+.|+|++|++++.+|.
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------~~~~-~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAF------------------------DLGK-VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECC------------------------BGGG-CCCCTTCCEEECCSSCCEECCCG
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceee------------------------ecCc-ccccCCCCEEECcCCcccCcCCh
Confidence 5555555555555555555555555544 3332 44444555555555555544555
Q ss_pred cccCcccceEEEcCCCCCcccCCCCCCCcCCCcccccCCCCCCCCC
Q 042086 385 CFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCGDI 430 (784)
Q Consensus 385 ~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 430 (784)
.+..+++|+.|++++|+++|.+|....+.......+.+|+++||.|
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred HHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 5555555555555555555555544444444444555566666654
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.5e-33 Score=300.67 Aligned_cols=297 Identities=25% Similarity=0.396 Sum_probs=256.6
Q ss_pred CeEEEEeCCCcc-----cCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCC
Q 042086 61 RVISINLSTVGL-----KGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSEN 135 (784)
Q Consensus 61 ~v~~l~l~~~~~-----~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 135 (784)
.+..+++.+..+ .+.+++|++|+|++|++++..+ +..+++|++|+|++|.+++. +.+..+++|++|++++|
T Consensus 45 ~L~~L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n 120 (347)
T 4fmz_A 45 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNED 120 (347)
T ss_dssp TCSEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTS
T ss_pred cccEEEEeCCccccchhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCC
Confidence 445555554432 3468899999999999997544 99999999999999999863 46999999999999999
Q ss_pred ccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccch
Q 042086 136 QLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPS 215 (784)
Q Consensus 136 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 215 (784)
.+.+. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+
T Consensus 121 ~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 194 (347)
T 4fmz_A 121 NISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP- 194 (347)
T ss_dssp CCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-
T ss_pred cccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-
Confidence 99954 33 8999999999999997664444 48999999999999999985544 8899999999999999986544
Q ss_pred hhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCc
Q 042086 216 ILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTE 295 (784)
Q Consensus 216 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 295 (784)
+..+++|+.|++++|.+++..+ +..+++|++|++++|+++ .++. +..+++|++|++++|.+++. ..+..+++
T Consensus 195 -~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~--~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~ 266 (347)
T 4fmz_A 195 -LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT--DLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTK 266 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC--CCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred -ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC--CCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCC
Confidence 8899999999999999996654 889999999999999997 4443 88999999999999999864 56889999
Q ss_pred cceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCC
Q 042086 296 LEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSH 375 (784)
Q Consensus 296 L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 375 (784)
|++|++++|.+++. ..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..| +..+++|+.|++++
T Consensus 267 L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 342 (347)
T 4fmz_A 267 LKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFAN 342 (347)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSC
T ss_pred cCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhh
Confidence 99999999999864 468999999999999999999899999999999999999999997766 88999999999999
Q ss_pred CccC
Q 042086 376 NNFS 379 (784)
Q Consensus 376 N~l~ 379 (784)
|+|+
T Consensus 343 N~i~ 346 (347)
T 4fmz_A 343 QVIK 346 (347)
T ss_dssp C---
T ss_pred hccc
Confidence 9986
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=8.7e-33 Score=295.29 Aligned_cols=296 Identities=23% Similarity=0.243 Sum_probs=211.8
Q ss_pred cccceeEEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCC
Q 042086 49 CAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLY 128 (784)
Q Consensus 49 C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 128 (784)
|.|..+.|...+ ++.+ + ..-.+.+++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|+.+++|+
T Consensus 31 c~l~~l~~~~~~-l~~l--p----~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 31 CHLRVVQCSDLG-LEKV--P----KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp EETTEEECTTSC-CCSC--C----CSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCeEEEecCCC-cccc--C----ccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 788888886432 1111 1 11236899999999999998888999999999999999999999999999999999
Q ss_pred EEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCC--CccccccCccCCceeeccc
Q 042086 129 HLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSG--SIPISLGNLSNLVVLHLFE 206 (784)
Q Consensus 129 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~ 206 (784)
+|+|++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+.. ..+..+.++++|++|++++
T Consensus 104 ~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 104 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp EEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred EEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 9999999999 5666655 799999999999998877889999999999999999964 6677888899999999999
Q ss_pred cccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCC
Q 042086 207 NSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNL 286 (784)
Q Consensus 207 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 286 (784)
|+++.. |..+. ++|++|++++|++++..+..|..+++|++|++++|+++ ...+..+..+++|++|++++|+++ .+
T Consensus 181 n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 181 TNITTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp SCCCSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-EECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred CccccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc-eeChhhccCCCCCCEEECCCCcCc-cC
Confidence 998753 43332 67888888888888777777777777777777777765 222335666666666666666666 55
Q ss_pred CccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccc--cccccccc
Q 042086 287 PRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEG--KIPCEICN 364 (784)
Q Consensus 287 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~ 364 (784)
|..+..+++|++|++++|++++..+..|.... .....+.|+.|++++|.+.. ..|..|..
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCcccccc
Confidence 55666666666666666666654444443220 00012344445555554432 33445555
Q ss_pred cccccEEecCCCc
Q 042086 365 MESLEKLNLSHNN 377 (784)
Q Consensus 365 l~~L~~L~L~~N~ 377 (784)
+..|+.++|++|+
T Consensus 318 ~~~l~~l~L~~N~ 330 (330)
T 1xku_A 318 VYVRAAVQLGNYK 330 (330)
T ss_dssp CCCGGGEEC----
T ss_pred ccceeEEEecccC
Confidence 5556666665553
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.3e-35 Score=316.19 Aligned_cols=245 Identities=16% Similarity=0.117 Sum_probs=185.3
Q ss_pred hcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCC-----CCCChhhHHHHHHHHhccC---------CCceeeE
Q 042086 514 TNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPC-----EMVPQPEFVNEIKTLTELR---------HRSIVKF 579 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~---------h~niv~l 579 (784)
.++|++.+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35689999999999999999998 6899999999765321 2223478999999999886 6666666
Q ss_pred EeEE-----------------ec-------------CCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 042086 580 YGFC-----------------SH-------------PRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANA 629 (784)
Q Consensus 580 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 629 (784)
.+.+ .+ .+..++||||+++|++.+.+.. ..+++..++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 6553 32 6789999999999977666643 357889999999999999
Q ss_pred HHHHh-hCCCCCeEEeCCCCCCeeecCCC--------------------ceEEeccccccccCCCCCccccccccccccc
Q 042086 630 LSYMH-HDCFPPIVHRDISSKNVLLCLDY--------------------EARVSDFGIAKFLKPDSSNCTELVGTFGYIA 688 (784)
Q Consensus 630 l~~LH-~~~~~~ivH~Dlk~~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~a 688 (784)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecccC
Confidence 99999 88 999999999999999887 899999999987653 23479999999
Q ss_pred ccccccCCcCcchhHHHHHHH-HHHHHhCCCCCCccccccccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHhcc
Q 042086 689 PELVYTMKVTEKCDVYSFGVL-ALEVIKGDHPRDFISSISSSSSNRNISLNEILDPRLPTPPQNVQDELISIVEVAFLCL 767 (784)
Q Consensus 689 PE~~~~~~~~~~sDvwslGv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~li~~cl 767 (784)
||++.+.. +.++||||+|++ .+++++|..||....+... ......... ................++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY---LTDKMLKQM-TFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH---HHHHHHHTC-CCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhH---HHHhhhhhh-ccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998776 889999998777 7788899999853211000 000000000 00111111122345678999999999
Q ss_pred cCCCCCCCCHHHHH
Q 042086 768 NESPESRPPMHTVC 781 (784)
Q Consensus 768 ~~dP~~RPs~~~vl 781 (784)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999998
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.5e-33 Score=297.04 Aligned_cols=267 Identities=24% Similarity=0.240 Sum_probs=135.5
Q ss_pred CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeecc
Q 042086 102 NLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLS 181 (784)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 181 (784)
+|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++|.++ .+|..+. ++|++|+++
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECC
Confidence 4444444444444444444444444444444444444444444444444444444444444 2232222 344444444
Q ss_pred ccccCCCccccccCccCCceeeccccccC--CccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCC
Q 042086 182 SNQLSGSIPISLGNLSNLVVLHLFENSLF--GSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSV 259 (784)
Q Consensus 182 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 259 (784)
+|.+++..+..|..+++|+.|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|++++|+++
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~- 206 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ- 206 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC-
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC-
Confidence 44444333334444444444444444443 2334444444 45555555555543 232222 45555555555554
Q ss_pred CCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhh
Q 042086 260 GEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELE 339 (784)
Q Consensus 260 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~ 339 (784)
...+..+..+++|++|++++|++++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..+..+.
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 122234555556666666666665555555666666666666666665 4555566666666666666666655444444
Q ss_pred c------ccccCeeccCCcccc--ccccccccccccccEEecCCCc
Q 042086 340 K------LIQLSELDLSLNILE--GKIPCEICNMESLEKLNLSHNN 377 (784)
Q Consensus 340 ~------l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~ 377 (784)
. ...|+.|++++|++. +..|..|..+++|+.|++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 3 245667777777665 4556666677777777777764
No 296
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.6e-32 Score=300.61 Aligned_cols=304 Identities=30% Similarity=0.396 Sum_probs=173.5
Q ss_pred eEEEEeCCCcccC---CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccC
Q 042086 62 VISINLSTVGLKG---NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLS 138 (784)
Q Consensus 62 v~~l~l~~~~~~~---~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 138 (784)
++.+++.+.++.+ ..++|++|+|++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++
T Consensus 73 l~~L~l~~~~l~~lp~~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 73 AHELELNNLGLSSLPELPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp CSEEECTTSCCSCCCSCCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS
T ss_pred CCEEEecCCccccCCCCcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC
Confidence 4566666655443 34578888888888876 5543 3677777777777764 2221 157777777777777
Q ss_pred CCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhh
Q 042086 139 GSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILG 218 (784)
Q Consensus 139 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 218 (784)
+ +| .++.+++|++|++++|++++ +|..+ ++|++|++++|.+++ +| .++++++|+.|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 5 55 47777777777777777774 45433 467777777777775 45 57777777777777777764 23222
Q ss_pred cccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccce
Q 042086 219 NLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEY 298 (784)
Q Consensus 219 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 298 (784)
++|++|++++|+++ .+| .++.+++|++|++++|+++ .+|.. +++|+.|++++|++++ +|.. +++|+.
T Consensus 215 --~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~--~l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~ 281 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK--TLPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTF 281 (454)
T ss_dssp --TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS--SCCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCE
T ss_pred --CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCC--ccccc---ccccCEEECCCCcccc-cCcc---cCcCCE
Confidence 46777777777777 455 3677777777777777776 34432 3567777777777764 3432 256667
Q ss_pred eecccCccCC--CCccc-------------cccc-ccceEEecccccccCCCchhhhcccccCeeccCCccccccccccc
Q 042086 299 LDLSTNKLGN--SIPET-------------LGNL-LKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEI 362 (784)
Q Consensus 299 L~Ls~n~l~~--~~~~~-------------l~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 362 (784)
|++++|.+++ .+|.. +..+ ++|++|++++|++++ +|.. +++|+.|++++|+++ .+|.
T Consensus 282 L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~-- 354 (454)
T 1jl5_A 282 LDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE-- 354 (454)
T ss_dssp EECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC--
T ss_pred EECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc--
Confidence 7777776664 22210 1111 244555555555444 2222 344555555555554 2333
Q ss_pred cccccccEEecCCCccCC--CCcccccCc-------------ccceEEEcCCCCCcc
Q 042086 363 CNMESLEKLNLSHNNFSG--LIPSCFEGM-------------HGLSCIDVSYNELRG 404 (784)
Q Consensus 363 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l-------------~~L~~l~l~~N~l~~ 404 (784)
.+++|+.|++++|++++ .+|..+..+ ++|+.|++++|++++
T Consensus 355 -~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 355 -LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp -CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred -hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 23455555555555555 444444444 445555555555554
No 297
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.98 E-value=9.1e-32 Score=298.92 Aligned_cols=309 Identities=28% Similarity=0.371 Sum_probs=183.3
Q ss_pred CCCCcccEEeCCCCcccccCCCCcCCCCCC-------------CEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCC
Q 042086 74 GNLKSLSTLDLSKNKLNGSIPFSFGNLTNL-------------AIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGS 140 (784)
Q Consensus 74 ~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L-------------~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 140 (784)
+++++|++|+|++|+++|.+|..++.+.+| ++|++++|.+++ +|.. .++|++|++++|.+++
T Consensus 31 ~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~- 105 (454)
T 1jl5_A 31 ENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE- 105 (454)
T ss_dssp ---CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-
T ss_pred hcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-
Confidence 456667777777777777777777776653 777777777764 3332 3567777777777775
Q ss_pred CCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcc
Q 042086 141 IPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNL 220 (784)
Q Consensus 141 ~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 220 (784)
+|.. +++|++|++++|.+++ ++.. .++|++|++++|++++ +| .++++++|++|++++|++++ +|..+
T Consensus 106 lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~--- 172 (454)
T 1jl5_A 106 LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP--- 172 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---
T ss_pred cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---
Confidence 5543 3567777777776664 2221 1567777777777774 55 47777777777777777764 33322
Q ss_pred cccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceee
Q 042086 221 KMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLD 300 (784)
Q Consensus 221 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 300 (784)
++|++|++++|++++ +| .++++++|+.|++++|+++ .+|... ++|++|++++|.++ .+| .+..+++|++|+
T Consensus 173 ~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~--~l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~ 243 (454)
T 1jl5_A 173 PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLK--KLPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIY 243 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS--SCCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEE
T ss_pred ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCC--cCCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEE
Confidence 467777777777775 44 4677777777777777765 333222 46777777777776 455 366677777777
Q ss_pred cccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccc--cccccc-------------ccc
Q 042086 301 LSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEG--KIPCEI-------------CNM 365 (784)
Q Consensus 301 Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~-------------~~l 365 (784)
+++|++++ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++++ .+|..+ ..+
T Consensus 244 l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~ 315 (454)
T 1jl5_A 244 ADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDL 315 (454)
T ss_dssp CCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCC
T ss_pred CCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCC
Confidence 77777764 3332 2566666666666665 3322 2455566666665554 222111 112
Q ss_pred -ccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcccccCCC
Q 042086 366 -ESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNK 424 (784)
Q Consensus 366 -~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 424 (784)
++|+.|++++|++++ +|.. +++|+.|++++|.+++ +|. .........+.+|+
T Consensus 316 ~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~ 368 (454)
T 1jl5_A 316 PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNP 368 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSC
T ss_pred cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--hhhhccEEECCCCC
Confidence 356666666666665 3332 3556666666666663 444 23333333444443
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.9e-31 Score=279.35 Aligned_cols=261 Identities=24% Similarity=0.224 Sum_probs=131.0
Q ss_pred CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCC--CCcCccCCCcCcEEeecCCCcccccCCccccccccceee
Q 042086 102 NLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGS--IPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLH 179 (784)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 179 (784)
+|++|+|++|+++...+..|+++++|++|+|++|.++.. .|..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 444444444444433333344555555555555554421 1334444555555555555554 2344445555555555
Q ss_pred ccccccCCCcc-ccccCccCCceeeccccccCCccchhhhcccccceeccCCCcccc-ccCCCCcCCCCcceEEecCCCC
Q 042086 180 LSSNQLSGSIP-ISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSG-VIPLSIGNLNNLIGLYLYDNQL 257 (784)
Q Consensus 180 L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l 257 (784)
+++|.+++..+ ..+..+++|++|++++|.+.+..+..+.++++|++|++++|.+++ ..|..+..+++|++|++++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 55555553332 344555555555555555554445555555555555555555543 3445555555555555555554
Q ss_pred CCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccc-cceEEecccccccCCCc-
Q 042086 258 SVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLL-KLHYLNLSNNQFRKGFP- 335 (784)
Q Consensus 258 ~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~-~L~~L~ls~N~l~~~~~- 335 (784)
+ ...|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+++..|..+..++ +|++|+|++|++++...
T Consensus 188 ~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 188 E-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp C-EECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred C-CcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 4 12233445555555555555555554444556666666666666666666666666653 66666666666654211
Q ss_pred -hhhhcccccCeeccCCccccccccccccc
Q 042086 336 -VELEKLIQLSELDLSLNILEGKIPCEICN 364 (784)
Q Consensus 336 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 364 (784)
.....+..++.+....+.+....|..+.+
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred HHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 11222333444444445555444544433
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-34 Score=324.79 Aligned_cols=344 Identities=23% Similarity=0.197 Sum_probs=271.7
Q ss_pred CeEEEEeCCCcc--------cCCCCcccEEeCCCCcccc----cCCCCcCCCCCCCEEEccCCcccccCCCCC-CCCC--
Q 042086 61 RVISINLSTVGL--------KGNLKSLSTLDLSKNKLNG----SIPFSFGNLTNLAIMYLYRNSLSASIPPVI-GNLK-- 125 (784)
Q Consensus 61 ~v~~l~l~~~~~--------~~~l~~l~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l-~~l~-- 125 (784)
+++.+++....+ ...+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 356666665543 2357889999999999985 356778889999999999999976444332 2344
Q ss_pred --CCCEEEccCCccCC----CCCcCccCCCcCcEEeecCCCcccccCCccc-----cccccceeeccccccCCCc----c
Q 042086 126 --FLYHLDLSENQLSG----SIPPTLGNLSNLAVLHLYGNSLSGSIPSIIG-----NLKSLFYLHLSSNQLSGSI----P 190 (784)
Q Consensus 126 --~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~L~~n~l~~~~----~ 190 (784)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|.+++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 79999999999985 4578889999999999999999865444433 2567999999999998643 5
Q ss_pred ccccCccCCceeeccccccCCccchhhhc-----ccccceeccCCCccccc----cCCCCcCCCCcceEEecCCCCCCCC
Q 042086 191 ISLGNLSNLVVLHLFENSLFGSIPSILGN-----LKMLLHLGLSTNHLSGV----IPLSIGNLNNLIGLYLYDNQLSVGE 261 (784)
Q Consensus 191 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~-----l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~ 261 (784)
..+..+++|++|++++|.++...+..+.. .++|++|++++|.+++. ++..+..+++|++|++++|+++...
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 56677899999999999987655554433 56899999999999864 4667778899999999999886322
Q ss_pred c----ccccccccccceEeccCccccCC----CCccccCCCccceeecccCccCCCCccccccc-----ccceEEecccc
Q 042086 262 I----PIEIGKLSSLNYLVLNGNQLYGN----LPRALGSLTELEYLDLSTNKLGNSIPETLGNL-----LKLHYLNLSNN 328 (784)
Q Consensus 262 ~----~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l-----~~L~~L~ls~N 328 (784)
+ +..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+... ++|++|++++|
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 323 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCC
Confidence 1 11223578999999999999864 56677789999999999999986655555443 69999999999
Q ss_pred cccCC----CchhhhcccccCeeccCCccccccccccccc-----cccccEEecCCCccCC----CCcccccCcccceEE
Q 042086 329 QFRKG----FPVELEKLIQLSELDLSLNILEGKIPCEICN-----MESLEKLNLSHNNFSG----LIPSCFEGMHGLSCI 395 (784)
Q Consensus 329 ~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~l 395 (784)
.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|++++ .+|..+..+++|++|
T Consensus 324 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L 403 (461)
T 1z7x_W 324 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL 403 (461)
T ss_dssp CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred CCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEE
Confidence 99875 4666778899999999999998776666654 6799999999999986 778888889999999
Q ss_pred EcCCCCCcc
Q 042086 396 DVSYNELRG 404 (784)
Q Consensus 396 ~l~~N~l~~ 404 (784)
++++|++++
T Consensus 404 ~l~~N~i~~ 412 (461)
T 1z7x_W 404 DLSNNCLGD 412 (461)
T ss_dssp ECCSSSCCH
T ss_pred ECCCCCCCH
Confidence 999999875
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=286.16 Aligned_cols=280 Identities=20% Similarity=0.167 Sum_probs=167.6
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeec
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHL 180 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 180 (784)
+.....++++|.++ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33344555555555 3344332 35555555555555444445555555555555555555444444555555555555
Q ss_pred cccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccC-CCCcCCCCcceEEecCCC-CC
Q 042086 181 SSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIP-LSIGNLNNLIGLYLYDNQ-LS 258 (784)
Q Consensus 181 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~-l~ 258 (784)
++|.++ +..+..|.++++|++|++++|++++..+ ..+..+++|++|++++|+ +.
T Consensus 108 s~n~l~------------------------~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 108 SYNYLS------------------------NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp CSSCCS------------------------SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred CCCcCC------------------------cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc
Confidence 555554 3333334445555555555555543222 245555555555555553 22
Q ss_pred CCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhh
Q 042086 259 VGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVEL 338 (784)
Q Consensus 259 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 338 (784)
...+..+..+++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|++++..+..+
T Consensus 164 -~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 164 -KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242 (353)
T ss_dssp -EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--
T ss_pred -ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccc
Confidence 1223345566666667777777666666777777777777777777753333334456777777777777776544433
Q ss_pred h---cccccCeeccCCccccc----cccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 339 E---KLIQLSELDLSLNILEG----KIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 339 ~---~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
. ....++.++|++|.+.+ .+|..+..+++|+.|+|++|+++...+..|..+++|+.|++++|++.|.+|.
T Consensus 243 ~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 243 STGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 2 34556666777766665 4777888899999999999999965555578999999999999999998873
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=286.08 Aligned_cols=258 Identities=21% Similarity=0.174 Sum_probs=141.3
Q ss_pred CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeecc
Q 042086 102 NLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLS 181 (784)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 181 (784)
+|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 45555555555544444445555555555555555554444445555555555555555553333334555555555555
Q ss_pred ccccCCCcc-ccccCccCCceeecccc-ccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCC
Q 042086 182 SNQLSGSIP-ISLGNLSNLVVLHLFEN-SLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSV 259 (784)
Q Consensus 182 ~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 259 (784)
+|++++..+ ..+..+++|++|++++| .+....+..|.++++|++|++++|++++..|..+..+++|++|++++|+++
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~- 211 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI- 211 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-
Confidence 555553222 24555555555555555 344444555666666666666666666666666666666666666666654
Q ss_pred CCcccc-cccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccC----CC
Q 042086 260 GEIPIE-IGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRK----GF 334 (784)
Q Consensus 260 ~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~----~~ 334 (784)
.++.. +..+++|+.|++++|.+++..+..+... .....++.++++++.+++ .+
T Consensus 212 -~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~---------------------~~~~~l~~l~L~~~~l~~~~l~~l 269 (353)
T 2z80_A 212 -LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG---------------------ETNSLIKKFTFRNVKITDESLFQV 269 (353)
T ss_dssp -THHHHHHHHTTTEEEEEEESCBCTTCCCC---------------------------CCCCCCEEEEESCBCCHHHHHHH
T ss_pred -cchhhhhhhcccccEEECCCCccccccccccccc---------------------cccchhhccccccccccCcchhhh
Confidence 33332 2345666677777766665433322210 112233334444444333 24
Q ss_pred chhhhcccccCeeccCCcccccccccc-ccccccccEEecCCCccCCCCc
Q 042086 335 PVELEKLIQLSELDLSLNILEGKIPCE-ICNMESLEKLNLSHNNFSGLIP 383 (784)
Q Consensus 335 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~p 383 (784)
|..+..+++|+.|+|++|+++ .+|.. +..+++|++|+|++|++.+..|
T Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 270 MKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 566777777777777777777 45544 4777888888888888776543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.3e-30 Score=275.41 Aligned_cols=276 Identities=26% Similarity=0.250 Sum_probs=170.6
Q ss_pred EEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccc--cCCccccccccceeeccc
Q 042086 105 IMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGS--IPSIIGNLKSLFYLHLSS 182 (784)
Q Consensus 105 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~L~~ 182 (784)
.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++.. .+..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4455555554 4555443 6788999999998855555678888999999999888733 356666788888888888
Q ss_pred cccCCCccccccCccCCceeeccccccCCccc-hhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCC
Q 042086 183 NQLSGSIPISLGNLSNLVVLHLFENSLFGSIP-SILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGE 261 (784)
Q Consensus 183 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 261 (784)
|.++ .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|.+++..+..+..+++|++|++++|.++...
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 8887 466667788888888888888876554 56777778888888888777666666666666666666666655223
Q ss_pred cccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcc
Q 042086 262 IPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKL 341 (784)
Q Consensus 262 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l 341 (784)
+|..+..+++|++|++++|++++..|..+..++ +|++|+|++|++++..+..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~------------------------~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS------------------------SLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT------------------------TCCEEECTTSCCSBCCSGGGTTC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC------------------------CCCEEECCCCccCccChhhccCc
Confidence 444445555555555555555444444444444 45555555554444444444555
Q ss_pred cccCeeccCCccccccccccccccc-cccEEecCCCccCCCCc--ccccCcccceEEEcCCCCCcccCCC
Q 042086 342 IQLSELDLSLNILEGKIPCEICNME-SLEKLNLSHNNFSGLIP--SCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 342 ~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
++|+.|+|++|++++..|..+..++ +|+.|+|++|++++.-+ .....+...+.+.+..+.+.|..|.
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 5555555555555555555555553 55566666665554321 1112233344445555666665553
No 303
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.5e-33 Score=316.00 Aligned_cols=329 Identities=19% Similarity=0.122 Sum_probs=268.7
Q ss_pred CCcccEEeCCCCcccccCCCC-cCCCCCCCEEEccCCcccc----cCCCCCCCCCCCCEEEccCCccCCCCCcCcc-CCC
Q 042086 76 LKSLSTLDLSKNKLNGSIPFS-FGNLTNLAIMYLYRNSLSA----SIPPVIGNLKFLYHLDLSENQLSGSIPPTLG-NLS 149 (784)
Q Consensus 76 l~~l~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~ 149 (784)
+++|++|||++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+.+..+..+. .++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 457899999999998665444 7889999999999999985 4577788899999999999999865444433 355
Q ss_pred ----cCcEEeecCCCccc----ccCCccccccccceeeccccccCCCcccccc-----CccCCceeeccccccCCcc---
Q 042086 150 ----NLAVLHLYGNSLSG----SIPSIIGNLKSLFYLHLSSNQLSGSIPISLG-----NLSNLVVLHLFENSLFGSI--- 213 (784)
Q Consensus 150 ----~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~--- 213 (784)
+|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 79999999999994 5688899999999999999999865444332 3568999999999998644
Q ss_pred -chhhhcccccceeccCCCccccccCCCCc-----CCCCcceEEecCCCCCCCC---cccccccccccceEeccCccccC
Q 042086 214 -PSILGNLKMLLHLGLSTNHLSGVIPLSIG-----NLNNLIGLYLYDNQLSVGE---IPIEIGKLSSLNYLVLNGNQLYG 284 (784)
Q Consensus 214 -~~~l~~l~~L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~L~~n~l~~~~---~~~~l~~l~~L~~L~l~~n~l~~ 284 (784)
+..+..+++|++|++++|.+++..+..+. ..++|++|++++|.++... ++..+..+++|++|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 66677889999999999999865554443 3679999999999998432 56677889999999999999975
Q ss_pred CC-----CccccCCCccceeecccCccCCC----CcccccccccceEEecccccccCCCchhhhcc-----cccCeeccC
Q 042086 285 NL-----PRALGSLTELEYLDLSTNKLGNS----IPETLGNLLKLHYLNLSNNQFRKGFPVELEKL-----IQLSELDLS 350 (784)
Q Consensus 285 ~~-----~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l-----~~L~~L~Ls 350 (784)
.. +..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+... ++|+.|+|+
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 43 22334689999999999999864 56778889999999999999987655555543 699999999
Q ss_pred Ccccccc----ccccccccccccEEecCCCccCCCCcccccC-----cccceEEEcCCCCCcc
Q 042086 351 LNILEGK----IPCEICNMESLEKLNLSHNNFSGLIPSCFEG-----MHGLSCIDVSYNELRG 404 (784)
Q Consensus 351 ~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~ 404 (784)
+|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|++++|++++
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 9999976 5667778899999999999999876665553 6799999999999985
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.4e-29 Score=278.53 Aligned_cols=252 Identities=24% Similarity=0.237 Sum_probs=155.7
Q ss_pred CEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeecccc
Q 042086 128 YHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFEN 207 (784)
Q Consensus 128 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 207 (784)
..++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 44555555555 3444332 45566666666665555555666666666666666665555555555666666666666
Q ss_pred ccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCC
Q 042086 208 SLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLP 287 (784)
Q Consensus 208 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 287 (784)
+++...+..|.++++|++|+|++|+++...+..|..+++|+.|++++|.. +....+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~------------------------l~~i~~ 189 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK------------------------LEYISE 189 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTT------------------------CCEECT
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCC------------------------ccccCh
Confidence 66555555566666666666666666654445555555555555554321 111122
Q ss_pred ccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCcccccccccccccccc
Q 042086 288 RALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMES 367 (784)
Q Consensus 288 ~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 367 (784)
..|..+++|++|+|++|++++. | .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 2344555555555555555532 2 3556666777777777776666667777777777777777777777777777778
Q ss_pred ccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 368 LEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 368 L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
|+.|+|++|++++..+..+..+++|+.|+|++|+|.|.+.-
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 88888888888877777777788888888888888877653
No 305
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.1e-29 Score=266.75 Aligned_cols=232 Identities=23% Similarity=0.266 Sum_probs=133.5
Q ss_pred CCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceee
Q 042086 100 LTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLH 179 (784)
Q Consensus 100 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 179 (784)
.++++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467777777777777 66777777777777777777777 67777777777777777777777 5676777777777777
Q ss_pred ccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCC
Q 042086 180 LSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSV 259 (784)
Q Consensus 180 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 259 (784)
|++|++.+.+|..+... ..+..|.++++|++|+|++|+++ .+|..+..+++|++|+|++|+++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~- 219 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS- 219 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-
Confidence 77776666666554320 01122444555555555555555 44444444555555555555444
Q ss_pred CCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhh
Q 042086 260 GEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELE 339 (784)
Q Consensus 260 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~ 339 (784)
.+|..+..+++|++|++++|.+.+.+|..+..+++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..++
T Consensus 220 -~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 -ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp -CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred -cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 3343444445555555555555545555555555555555555444444444444444444444444444444444444
Q ss_pred cccccCeeccCCc
Q 042086 340 KLIQLSELDLSLN 352 (784)
Q Consensus 340 ~l~~L~~L~Ls~N 352 (784)
.+++|+.+++..|
T Consensus 299 ~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 299 QLPANCIILVPPH 311 (328)
T ss_dssp GSCTTCEEECCGG
T ss_pred hccCceEEeCCHH
Confidence 4444444444443
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.9e-29 Score=261.06 Aligned_cols=254 Identities=25% Similarity=0.240 Sum_probs=157.8
Q ss_pred cEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCC
Q 042086 80 STLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGN 159 (784)
Q Consensus 80 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (784)
++++.++++++. +|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 577888888773 34433 457777777777777766677777777777777777777666777777777777777777
Q ss_pred C-cccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccC
Q 042086 160 S-LSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIP 238 (784)
Q Consensus 160 ~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 238 (784)
. ++...|..|..+++|++|+|++|.+++..|..+..+++|++|++++|++++..+..|+++++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 665556666777777777777777766556666666666666666666665555555556666666666665554333
Q ss_pred CCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccc
Q 042086 239 LSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLL 318 (784)
Q Consensus 239 ~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 318 (784)
.. +..+++|++|++++|.+++..|..+..+++|+.|++++|.+++..+..+..++
T Consensus 171 ~~-------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 171 RA-------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TT-------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HH-------------------------hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 33 34445555555555555555566666666666666666666655555566666
Q ss_pred cceEEecccccccCCCchhhhcccccCeeccCCccccccccccc
Q 042086 319 KLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEI 362 (784)
Q Consensus 319 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 362 (784)
+|++|++++|++....+. ..-...++.+..+.+.+....|..+
T Consensus 226 ~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp TCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHh
Confidence 666666666666542221 1112233444455555555555444
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=275.78 Aligned_cols=254 Identities=25% Similarity=0.280 Sum_probs=187.4
Q ss_pred CCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeecc
Q 042086 126 FLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLF 205 (784)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 205 (784)
....++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4567888888887 5666554 678888888888887777778888888888888888776666777777777777777
Q ss_pred ccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCC
Q 042086 206 ENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGN 285 (784)
Q Consensus 206 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~ 285 (784)
+|+++...+..|.++++|++|+|++|+++...+..|..+++|++|+|++|. .+...
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~------------------------~l~~i 176 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK------------------------RLSYI 176 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT------------------------TCCEE
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC------------------------Cccee
Confidence 777776666667777777777777777776555556666666666655532 22222
Q ss_pred CCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCcccccccccccccc
Q 042086 286 LPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNM 365 (784)
Q Consensus 286 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 365 (784)
.+..|..+++|++|+|++|+++. +| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+
T Consensus 177 ~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 254 (440)
T 3zyj_A 177 SEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254 (440)
T ss_dssp CTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTC
T ss_pred CcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCC
Confidence 23356666666777777776663 33 36677778888888888877777788888888888888888887778888888
Q ss_pred ccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 366 ESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 366 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
++|+.|+|++|++++..+..|..+++|+.|+|++|+|.|.+.-
T Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 255 QSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred CCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 8888888888888888888888888899999999998887754
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.6e-29 Score=260.49 Aligned_cols=208 Identities=30% Similarity=0.380 Sum_probs=184.2
Q ss_pred CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCc-cCCCCCcCccCCCcCcE
Q 042086 75 NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQ-LSGSIPPTLGNLSNLAV 153 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~ 153 (784)
..++|++|+|++|+|++..+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|. +....|..+..+++|++
T Consensus 30 ~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 45689999999999999988999999999999999999999999999999999999999997 88777899999999999
Q ss_pred EeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcc
Q 042086 154 LHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL 233 (784)
Q Consensus 154 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 233 (784)
|+|++|.+++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|+.|++++|++
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc
Confidence 99999999988899999999999999999999977777899999999999999999988778899999999999999999
Q ss_pred ccccCCCCcCCCCcceEEecCCCCCCCCcc-cccccccccceEeccCccccC
Q 042086 234 SGVIPLSIGNLNNLIGLYLYDNQLSVGEIP-IEIGKLSSLNYLVLNGNQLYG 284 (784)
Q Consensus 234 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~~l~~l~~L~~L~l~~n~l~~ 284 (784)
++..|..|..+++|+.|++++|+++ .++ ..+..+++|+.|++++|++..
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLFANNLS--ALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCS--CCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cccCHhHccCcccccEeeCCCCcCC--cCCHHHcccCcccCEEeccCCCccC
Confidence 9888888888888888888777776 233 335666666666666666653
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=7.8e-29 Score=276.49 Aligned_cols=246 Identities=25% Similarity=0.211 Sum_probs=126.1
Q ss_pred CEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeecccc
Q 042086 104 AIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSN 183 (784)
Q Consensus 104 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 183 (784)
..++.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 33444444443 2333332 34555555555555444555555555555555555555444455555555555555555
Q ss_pred ccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCC-CccccccCCCCcCCCCcceEEecCCCCCCCCc
Q 042086 184 QLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLST-NHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEI 262 (784)
Q Consensus 184 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 262 (784)
.+++..+..|..+++|++|+|++|+++...+..|.++++|+.|++++ |.+....+..|.++++|+.|+|++|+++ .+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~--~~ 211 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK--DM 211 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS--SC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc--cc
Confidence 55544444455555555555555555544445555556666666655 3333333334555555555555555554 22
Q ss_pred ccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhccc
Q 042086 263 PIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLI 342 (784)
Q Consensus 263 ~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 342 (784)
| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 2 344455555555555555555555555555555555555555554455555555555555555555544444444444
Q ss_pred ccCeeccCCcccc
Q 042086 343 QLSELDLSLNILE 355 (784)
Q Consensus 343 ~L~~L~Ls~N~l~ 355 (784)
+|+.|+|++|.+.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 4555555444443
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.9e-29 Score=275.03 Aligned_cols=248 Identities=25% Similarity=0.248 Sum_probs=136.6
Q ss_pred ccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecC
Q 042086 79 LSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYG 158 (784)
Q Consensus 79 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 158 (784)
.+.++.++++++ .+|..+. ++++.|+|++|+|++..+..|+++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456677777666 3454443 4566666666666666666666666666666666666655555666666666666666
Q ss_pred CCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccC
Q 042086 159 NSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIP 238 (784)
Q Consensus 159 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 238 (784)
|+++...+..|.++++|++|+|++|.++...+..|..+++|+.|+|++|. .+....+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~-----------------------~l~~i~~ 178 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK-----------------------RLSYISE 178 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT-----------------------TCCEECT
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC-----------------------CcceeCc
Confidence 66665444455666666666666666554444455555555555555422 2222223
Q ss_pred CCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccc
Q 042086 239 LSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLL 318 (784)
Q Consensus 239 ~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 318 (784)
..|.++++|++|+|++|+++ .+| .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|.+++
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~--~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLR--EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCS--SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred chhhcccccCeecCCCCcCc--ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 34444444555555544443 233 244455555555555555555555555555555555555555555555555555
Q ss_pred cceEEecccccccCCCchhhhcccccCeeccCCcccc
Q 042086 319 KLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILE 355 (784)
Q Consensus 319 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 355 (784)
+|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 5555555555555544444455555555555555443
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=6.6e-31 Score=278.05 Aligned_cols=250 Identities=24% Similarity=0.245 Sum_probs=160.7
Q ss_pred CCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcc-cccCCCCCC-------CCCCCCEEEccCCccCCCCCcCc
Q 042086 74 GNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSL-SASIPPVIG-------NLKFLYHLDLSENQLSGSIPPTL 145 (784)
Q Consensus 74 ~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l-~~~~p~~l~-------~l~~L~~L~L~~n~l~~~~p~~l 145 (784)
+...+|+.|++++|++ .+|..+... |+.|+|++|.+ ...+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3456778888888888 667666544 78888888888 345666555 67888888888888887777766
Q ss_pred --cCCCcCcEEeecCCCcccccCCccccc-----cccceeeccccccCCCccccccCccCCceeeccccccCCc--cchh
Q 042086 146 --GNLSNLAVLHLYGNSLSGSIPSIIGNL-----KSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGS--IPSI 216 (784)
Q Consensus 146 --~~l~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~ 216 (784)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 7788888888888888866 7777766 7777888887777766667777777777777777776543 2223
Q ss_pred h--hcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcc-cccccccccceEeccCccccCCCC-ccccC
Q 042086 217 L--GNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIP-IEIGKLSSLNYLVLNGNQLYGNLP-RALGS 292 (784)
Q Consensus 217 l--~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~ 292 (784)
+ .++++|++|+|++|++++.. .++ ..+..+++|++|++++|++++..| ..+..
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~-----------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPS-----------------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHH-----------------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred HHhccCCCCCEEECCCCcCcchH-----------------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 3 55666666666666665211 011 112334555555555555554443 23444
Q ss_pred CCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccc
Q 042086 293 LTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEG 356 (784)
Q Consensus 293 l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 356 (784)
+++|++|+|++|.++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 556666666666665 4455444 5666666666666653 33 5666666666666666553
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2.7e-30 Score=274.08 Aligned_cols=258 Identities=20% Similarity=0.136 Sum_probs=167.5
Q ss_pred cccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeec
Q 042086 78 SLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLY 157 (784)
Q Consensus 78 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 157 (784)
.++.++++.+.+.......+..+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667777777776666666777788888888888887777778888888888888888876544 7778888888888
Q ss_pred CCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcccccc
Q 042086 158 GNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVI 237 (784)
Q Consensus 158 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 237 (784)
+|.+++.. ..++|++|++++|.+++..+.. +++|+.|++++|++++..+..+..+++|++|+|++|++++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 88877433 2367888888888887554433 466777888888777766767777777777777777777665
Q ss_pred CCCCc-CCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccc
Q 042086 238 PLSIG-NLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGN 316 (784)
Q Consensus 238 ~~~l~-~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~ 316 (784)
+..+. .+++|++|+|++|+++ .++ ....+++|++|++++|++++ +|..+..+++|+.|+|++|.++ .+|..+..
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~--~~~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~ 235 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIY--DVK-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRF 235 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCC--EEE-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred HHHHhhccCcCCEEECCCCcCc--ccc-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhc
Confidence 55543 5666666666666665 222 22235555555555555553 2333555555555555555555 34444555
Q ss_pred cccceEEeccccccc-CCCchhhhcccccCeeccC
Q 042086 317 LLKLHYLNLSNNQFR-KGFPVELEKLIQLSELDLS 350 (784)
Q Consensus 317 l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~Ls 350 (784)
+++|+.|++++|++. +.++..+..+++|+.|+++
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 555555555555554 3344444444555555544
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=7.2e-28 Score=275.53 Aligned_cols=268 Identities=26% Similarity=0.336 Sum_probs=193.5
Q ss_pred cccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeec
Q 042086 78 SLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLY 157 (784)
Q Consensus 78 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 157 (784)
.++.|++++|+|+ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4788999999998 6777665 89999999999998 4555 5789999999999988 4555 67899999999
Q ss_pred CCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcccccc
Q 042086 158 GNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVI 237 (784)
Q Consensus 158 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 237 (784)
+|.+++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|++++. |. .+++|+.|++++|.+++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-C
Confidence 999885 444 56789999999999884 5543 47888888888888753 32 34678888888888885 4
Q ss_pred CCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccccccc
Q 042086 238 PLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNL 317 (784)
Q Consensus 238 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 317 (784)
| ..+++|+.|++++|+++ .+|.. +++|+.|++++|.++ .+|.. +++|+.|+|++|.+++ +| ..+
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~--~l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLA--SLPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp C---CCCTTCCEEECCSSCCS--CCCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred c---ccCCCCcEEECCCCCCC--CCCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 4 34577888888888776 34432 367777777777777 34432 3667777777777774 44 344
Q ss_pred ccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcc
Q 042086 318 LKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMH 390 (784)
Q Consensus 318 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 390 (784)
++|+.|+|++|+|+. +|. .+++|+.|+|++|+++ .+|..+.++++|+.|+|++|++++.+|..+..++
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 667777777777765 333 4566777777777776 5666677777777777777777766666555443
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.9e-30 Score=272.75 Aligned_cols=266 Identities=22% Similarity=0.200 Sum_probs=163.6
Q ss_pred CCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccc
Q 042086 103 LAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSS 182 (784)
Q Consensus 103 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 182 (784)
++.++++.+.+.......+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+ +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4455677777765555556667788888888888887777778888888888888888876554 77788888888888
Q ss_pred cccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCc
Q 042086 183 NQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEI 262 (784)
Q Consensus 183 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 262 (784)
|.+++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|+.|++++|+++
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---- 157 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID---- 157 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC----
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC----
Confidence 8877332 2367777777777776554433 455667777777766655555555555555555555554
Q ss_pred ccccccccccceEeccCccccCCCCccc-cCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcc
Q 042086 263 PIEIGKLSSLNYLVLNGNQLYGNLPRAL-GSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKL 341 (784)
Q Consensus 263 ~~~l~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l 341 (784)
+..+..+ ..+++|++|+|++|.+++. + ....+++|++|+|++|++++ +|..+..+
T Consensus 158 ---------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 213 (317)
T 3o53_A 158 ---------------------TVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSA 213 (317)
T ss_dssp ---------------------EEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGG
T ss_pred ---------------------cccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhccc
Confidence 3333333 2344455555555554432 1 12224555555555555554 23335555
Q ss_pred cccCeeccCCccccccccccccccccccEEecCCCccC-CCCcccccCcccceEEEcCC-CCCcccCC
Q 042086 342 IQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFS-GLIPSCFEGMHGLSCIDVSY-NELRGPIP 407 (784)
Q Consensus 342 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~l~~-N~l~~~~p 407 (784)
++|+.|+|++|+++ .+|..+..+++|+.|+|++|++. +.+|..+..+++|+.+++++ +.++|..|
T Consensus 214 ~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 66666666666665 35555666666666666666666 55556666666666666663 34444433
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.8e-27 Score=272.28 Aligned_cols=263 Identities=27% Similarity=0.368 Sum_probs=223.8
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeec
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHL 180 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 180 (784)
.+++.|++++|.++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35899999999999 7787776 89999999999999 5565 57999999999999984 565 6799999999
Q ss_pred cccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCC
Q 042086 181 SSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVG 260 (784)
Q Consensus 181 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 260 (784)
++|.+++ +|. .+++|+.|++++|+++.. |.. +++|++|+|++|++++ +|. .+++|+.|++++|+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~-- 174 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLT-- 174 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS--
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCC--
Confidence 9999995 454 568999999999999864 433 4899999999999985 343 3578999999999998
Q ss_pred CcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhc
Q 042086 261 EIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEK 340 (784)
Q Consensus 261 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~ 340 (784)
.+| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. +|.. +++|++|+|++|++++ +| ..
T Consensus 175 ~l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~ 239 (622)
T 3g06_A 175 SLP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VL 239 (622)
T ss_dssp CCC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CC
T ss_pred CCc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CC
Confidence 466 456899999999999985 4543 4799999999999984 5543 4789999999999998 55 56
Q ss_pred ccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 341 LIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 341 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.+|.
T Consensus 240 l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 240 PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 689999999999999 5665 6789999999999999 6688899999999999999999987764
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.5e-30 Score=270.44 Aligned_cols=253 Identities=21% Similarity=0.195 Sum_probs=176.8
Q ss_pred CCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcc-cccCCccc-------cccccceeeccccccCCCccc
Q 042086 120 VIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLS-GSIPSIIG-------NLKSLFYLHLSSNQLSGSIPI 191 (784)
Q Consensus 120 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~~~~l~-------~l~~L~~L~L~~n~l~~~~~~ 191 (784)
.++..++|++|++++|.+ .+|..+... |+.|+|++|.++ ..+|..+. ++++|++|+|++|.+++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 345567889999999998 677766644 889999999884 45565554 688999999999999988888
Q ss_pred cc--cCccCCceeeccccccCCccchhhhcc-----cccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCC-Ccc
Q 042086 192 SL--GNLSNLVVLHLFENSLFGSIPSILGNL-----KMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVG-EIP 263 (784)
Q Consensus 192 ~~--~~l~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~ 263 (784)
.+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..+..|+.+++|++|+|++|++... .++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8889999999999999877 7778777 7888888888888877777777777777777777765410 011
Q ss_pred cccccccccceEeccCccccCCCCccccCCCccceeecccCccCC--CCc-ccccccccceEEecccccccCCCc-hhhh
Q 042086 264 IEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGN--SIP-ETLGNLLKLHYLNLSNNQFRKGFP-VELE 339 (784)
Q Consensus 264 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~--~~~-~~l~~l~~L~~L~ls~N~l~~~~~-~~~~ 339 (784)
..+ .+..+++|++|+|++|++++ .++ ..+..+++|++|++++|++++..| ..+.
T Consensus 193 ~~~----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 193 SAL----------------------CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp HHS----------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred HHH----------------------HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 122 11344455555555555542 111 223345566666666666665443 3444
Q ss_pred cccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcc
Q 042086 340 KLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRG 404 (784)
Q Consensus 340 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 404 (784)
.+++|+.|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|++++|++++
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5667777777777776 5666555 7788888888888876 55 7788888888888888775
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-28 Score=277.01 Aligned_cols=236 Identities=24% Similarity=0.217 Sum_probs=127.1
Q ss_pred CCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceee
Q 042086 124 LKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLH 203 (784)
Q Consensus 124 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 203 (784)
+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3355555555555555545555555555555555555554433 5555555555555555553211 14555555
Q ss_pred ccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCcccc
Q 042086 204 LFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLY 283 (784)
Q Consensus 204 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~ 283 (784)
+++|.+++..+.. +++|+.|+|++|.+++..|..++ .+++|+.|+|++|.++
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~-------------------------~l~~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEG-------------------------CRSRVQYLDLKLNEID 157 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGG-------------------------GGSSEEEEECTTSCCC
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhc-------------------------CCCCCCEEECCCCCCC
Confidence 5555554433321 23445555555555444443333 3344444444444444
Q ss_pred CCCCcccc-CCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccc
Q 042086 284 GNLPRALG-SLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEI 362 (784)
Q Consensus 284 ~~~~~~l~-~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 362 (784)
+..|..+. .+++|+.|+|++|.+++. | .+..+++|++|+|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+
T Consensus 158 ~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 158 TVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 44444443 445555555555555533 1 12235566666666666665 33346666666666666666663 56566
Q ss_pred cccccccEEecCCCccC-CCCcccccCcccceEEEcC
Q 042086 363 CNMESLEKLNLSHNNFS-GLIPSCFEGMHGLSCIDVS 398 (784)
Q Consensus 363 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~l~ 398 (784)
..+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 66777777777777776 5566667777777777665
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=7.2e-29 Score=282.10 Aligned_cols=186 Identities=22% Similarity=0.159 Sum_probs=132.6
Q ss_pred EecccceEEEEEE-EcCCCEEEEEEcCCCCCCCC-------CChhhHHHHHHHHhcc-CCCceeeEEeEEecCCceEEEE
Q 042086 523 IGIGGQGSVYKAK-LTSGEILAVKKFHSLWPCEM-------VPQPEFVNEIKTLTEL-RHRSIVKFYGFCSHPRNSFLVY 593 (784)
Q Consensus 523 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 593 (784)
.+.|++|.+..++ .-.|+.|++|.+........ ...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5667777666654 33589999999876432221 1235699999999999 7999999999999999999999
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCC
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPD 673 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 673 (784)
||++|++|.+++...+. ++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+....+
T Consensus 322 Eyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999987653 4433 5899999999999999 9999999999999999999999999999987666
Q ss_pred CCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 042086 674 SSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDH 718 (784)
Q Consensus 674 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~ 718 (784)
.......+||++|||||++.+. +..++|+||+|++++++.++..
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence 5556678899999999999764 5678999999999887765543
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3e-28 Score=273.31 Aligned_cols=238 Identities=21% Similarity=0.137 Sum_probs=154.2
Q ss_pred CCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccce
Q 042086 98 GNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFY 177 (784)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 177 (784)
..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 344467777777777776666677777777777777777765544 6677777777777777764332 267777
Q ss_pred eeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCc-CCCCcceEEecCCC
Q 042086 178 LHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIG-NLNNLIGLYLYDNQ 256 (784)
Q Consensus 178 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~L~~n~ 256 (784)
|+|++|.+++..+. .+++|+.|+|++|.+++..|..++++++|+.|+|++|.+++..|..+. .+++|+.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 77777777755443 346777777887777777777777778888888888888776666654 56667777777766
Q ss_pred CCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEeccccccc-CCCc
Q 042086 257 LSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFR-KGFP 335 (784)
Q Consensus 257 l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~-~~~~ 335 (784)
++ .++ ....+++|+.|+|++|.+++. |..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++. +.+|
T Consensus 181 l~--~~~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 181 IY--DVK-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CC--EEE-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred cc--ccc-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 65 222 233456666666666666643 3336666666666666666663 4555666666666666666665 3344
Q ss_pred hhhhcccccCeeccC
Q 042086 336 VELEKLIQLSELDLS 350 (784)
Q Consensus 336 ~~~~~l~~L~~L~Ls 350 (784)
..+..++.|+.|+++
T Consensus 256 ~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 256 DFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHHhCCCCcEEecc
Confidence 555555555555554
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=1.1e-26 Score=240.28 Aligned_cols=216 Identities=27% Similarity=0.286 Sum_probs=148.8
Q ss_pred CCcccceeEEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCC
Q 042086 47 SPCAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKF 126 (784)
Q Consensus 47 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 126 (784)
++|.|.|+.|..... ++.+++++++++. +|..+. ++|++|+|++|++++..+..|+++++
T Consensus 3 ~~C~~~~~~C~c~~~-----------------~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~ 62 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNN-----------------KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTK 62 (270)
T ss_dssp CCBGGGTCSBEEETT-----------------TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTT
T ss_pred ccCCCCCCCCEeCCC-----------------CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCC
Confidence 689999999874332 3456666666663 454443 56777777777777666666777777
Q ss_pred CCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccc
Q 042086 127 LYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFE 206 (784)
Q Consensus 127 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 206 (784)
|++|+|++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 63 L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 142 (270)
T 2o6q_A 63 LRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCC
Confidence 77777777777755555566677777777777777765556667777777777777777766666677777777777777
Q ss_pred cccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCccc-ccccccccceEeccCccccC
Q 042086 207 NSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPI-EIGKLSSLNYLVLNGNQLYG 284 (784)
Q Consensus 207 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~-~l~~l~~L~~L~l~~n~l~~ 284 (784)
|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .++. .+..+++|+.|++++|.+..
T Consensus 143 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 143 NELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK--RVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS--CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC--cCCHHHhccccCCCEEEecCCCeeC
Confidence 7777666666777777777777777777666666777777777777777776 3333 46667777777777777764
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=6e-26 Score=235.65 Aligned_cols=210 Identities=25% Similarity=0.236 Sum_probs=145.8
Q ss_pred CCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEec
Q 042086 198 NLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVL 277 (784)
Q Consensus 198 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l 277 (784)
+|++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|+++ ...+..+..+++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC-ccChhhhcCCccccEEEC
Confidence 3444444444444333334444444444444444444444444444445555555555443 112234555666666666
Q ss_pred cCccccCCCCccccCCCccceeecccCccCCC-CcccccccccceEEecccccccCCCchhhhcccccC----eeccCCc
Q 042086 278 NGNQLYGNLPRALGSLTELEYLDLSTNKLGNS-IPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLS----ELDLSLN 352 (784)
Q Consensus 278 ~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N 352 (784)
++|.+.+..+..+..+++|++|++++|.+++. +|..+.++++|++|++++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 66666665555677888888888888888763 578888888899999999988887777888888887 8999999
Q ss_pred cccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC
Q 042086 353 ILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS 409 (784)
Q Consensus 353 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 409 (784)
.+++..+..+ ...+|+.|+|++|++++..+..+..+++|+.|++++|++.|.+|..
T Consensus 188 ~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 188 PMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred cccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 9996555444 4458999999999999988888999999999999999999988854
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=9.9e-26 Score=234.03 Aligned_cols=205 Identities=23% Similarity=0.210 Sum_probs=93.0
Q ss_pred cCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccC
Q 042086 150 NLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLS 229 (784)
Q Consensus 150 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 229 (784)
+|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444443333344444444444444444443333344444444444444444444444444555555555555
Q ss_pred CCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccc----eeecccCc
Q 042086 230 TNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELE----YLDLSTNK 305 (784)
Q Consensus 230 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~----~L~Ls~n~ 305 (784)
+|++++..+..+..+++|++|++++|+++...+|..+..+++|++|++++|++++..+..+..+++|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 55555444444455555555555555554323444455555555555555555544444444444444 44455555
Q ss_pred cCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCcccc
Q 042086 306 LGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILE 355 (784)
Q Consensus 306 l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 355 (784)
+++..+..+. ..+|+.|++++|++++..+..+..+++|+.|+|++|++.
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 4433222222 224444444444444433333333334444444433333
No 323
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=2.5e-28 Score=282.64 Aligned_cols=323 Identities=12% Similarity=0.055 Sum_probs=174.5
Q ss_pred ccEEeCCCCc-ccc-cCCCCcCCCCCCCEEEccCCccccc----CCCCCCCCCCCCEEEccCCccCCC----CCcCccCC
Q 042086 79 LSTLDLSKNK-LNG-SIPFSFGNLTNLAIMYLYRNSLSAS----IPPVIGNLKFLYHLDLSENQLSGS----IPPTLGNL 148 (784)
Q Consensus 79 l~~L~L~~n~-i~~-~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l 148 (784)
|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 6666666554 211 1112223556666666666655443 222334455666666666655422 22233445
Q ss_pred CcCcEEeecCCCcccccCCccccccccceeecc---------------------------ccccCCCccccccCccCCce
Q 042086 149 SNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLS---------------------------SNQLSGSIPISLGNLSNLVV 201 (784)
Q Consensus 149 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~---------------------------~n~l~~~~~~~~~~l~~L~~ 201 (784)
++|++|+|++|.+.+ ++..+.++++|++|+++ ++... .+|..+..+++|++
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRK 297 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcE
Confidence 566666666655553 33444445555555554 43222 34555555666666
Q ss_pred eeccccccCCccc-hhhhcccccceeccCCCccc-cccCCCCcCCCCcceEEec-----------CCCCCCCCccccccc
Q 042086 202 LHLFENSLFGSIP-SILGNLKMLLHLGLSTNHLS-GVIPLSIGNLNNLIGLYLY-----------DNQLSVGEIPIEIGK 268 (784)
Q Consensus 202 L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~-----------~n~l~~~~~~~~l~~ 268 (784)
|+|++|.+++... ..+.++++|+.|+++ +.+. +.++..+..+++|++|+++ .|.++...++.....
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 6666666543322 334556666666666 3332 2223333455666677766 244442223322344
Q ss_pred ccccceEeccCccccCCCCccccC-CCccceeecc----cCccCCC-----CcccccccccceEEecccc--cccCCCch
Q 042086 269 LSSLNYLVLNGNQLYGNLPRALGS-LTELEYLDLS----TNKLGNS-----IPETLGNLLKLHYLNLSNN--QFRKGFPV 336 (784)
Q Consensus 269 l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~Ls----~n~l~~~-----~~~~l~~l~~L~~L~ls~N--~l~~~~~~ 336 (784)
+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|++|++++| .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 667777777666666555555544 6677777775 5556543 2333555677777777643 25544444
Q ss_pred hhhc-ccccCeeccCCccccc-cccccccccccccEEecCCCccCCCC-cccccCcccceEEEcCCCCCcc
Q 042086 337 ELEK-LIQLSELDLSLNILEG-KIPCEICNMESLEKLNLSHNNFSGLI-PSCFEGMHGLSCIDVSYNELRG 404 (784)
Q Consensus 337 ~~~~-l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~ 404 (784)
.+.. +++|+.|+|++|++++ .++..+..+++|+.|+|++|++++.. +..+..+++|+.|++++|+++.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 4433 6677777777777765 33444466677777777777765442 3334456777777777777654
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=7.9e-25 Score=226.52 Aligned_cols=210 Identities=27% Similarity=0.296 Sum_probs=108.0
Q ss_pred CCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccce
Q 042086 98 GNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFY 177 (784)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 177 (784)
..+++|+.|++++|.++. .+.++.+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..+..|.++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 344445555555554442 12344455555555555555431 24445555555555555555444444455555555
Q ss_pred eeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCC
Q 042086 178 LHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQL 257 (784)
Q Consensus 178 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 257 (784)
|+|++|++++..+..|..+++|++|+|++|++++..+..+.++++|+.|++++|++++..+..|..+++|+.|++++|++
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 55555555544444445555555555555555544444455555555555555555544444455555555555555555
Q ss_pred CCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccccccccc
Q 042086 258 SVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLK 319 (784)
Q Consensus 258 ~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~ 319 (784)
+ +..+..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.++.
T Consensus 194 ~-~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 194 K-SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp S-CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred C-ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 4 22222345556666666666655532 335666666666666666666665543
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.7e-24 Score=222.34 Aligned_cols=205 Identities=24% Similarity=0.259 Sum_probs=129.9
Q ss_pred cceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecC
Q 042086 175 LFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYD 254 (784)
Q Consensus 175 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 254 (784)
++.++++++.++ .+|..+. ++|+.|+|++|+++...+..|.++++|++|+|++|+++...+..|
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~------------- 81 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF------------- 81 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTT-------------
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhh-------------
Confidence 445555555555 3343332 344555555555444444444445555555555555443333333
Q ss_pred CCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCC
Q 042086 255 NQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGF 334 (784)
Q Consensus 255 n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~ 334 (784)
..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|.+++..
T Consensus 82 ------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 82 ------------KELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp ------------SSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ------------cCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 34445555555555555444455566666666666666666666666667777777777777777655
Q ss_pred chhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 335 PVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 335 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|+|.+.++
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 5667777777777777777776666667778888888888888888777778888888999999998888765
No 326
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=1.7e-24 Score=221.27 Aligned_cols=190 Identities=26% Similarity=0.275 Sum_probs=150.3
Q ss_pred CCcccceeEEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCC
Q 042086 47 SPCAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKF 126 (784)
Q Consensus 47 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 126 (784)
+||.|.|++|.. ..+++++++++++ .+|..+. ++|+.|+|++|.+++..+..|+++++
T Consensus 3 ~Cp~~~gC~C~~-------------------~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~ 60 (251)
T 3m19_A 3 TCETVTGCTCNE-------------------GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTK 60 (251)
T ss_dssp -CHHHHSSEEEG-------------------GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred cCCCCCceEcCC-------------------CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCccc
Confidence 588999999963 2456777777777 4555554 57888888888888887888888888
Q ss_pred CCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccc
Q 042086 127 LYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFE 206 (784)
Q Consensus 127 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 206 (784)
|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++
T Consensus 61 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 140 (251)
T 3m19_A 61 LTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcC
Confidence 88888888888877777788888888888888888877777788888888888888888866666677888888888888
Q ss_pred cccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCC
Q 042086 207 NSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLS 258 (784)
Q Consensus 207 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 258 (784)
|+|++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 141 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 8888777777888888888888888888766667777777777777777765
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.7e-25 Score=230.05 Aligned_cols=209 Identities=26% Similarity=0.269 Sum_probs=123.9
Q ss_pred CCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEE
Q 042086 75 NLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVL 154 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 154 (784)
.+++|+.|++++|.++. ...+..+++|++|+|++|.+++. +.++.+++|++|+|++|.+++..+..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp HHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 44556666666666552 22455666666666666666542 355666666666666666665555555666666666
Q ss_pred eecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccc
Q 042086 155 HLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLS 234 (784)
Q Consensus 155 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 234 (784)
+|++|++++..+..|.++++|++|+|++|.+++..+..+..+++|+.|++++|++++..+..+.++++|+.|++++|+++
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 66666666555555566666666666666666555555566666666666666666555555566666666666666666
Q ss_pred cccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCc
Q 042086 235 GVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTE 295 (784)
Q Consensus 235 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 295 (784)
+..+..+..+++|+.|++++|.+. +.+++|+.|+++.|.++|.+|..++.++.
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~--------~~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWD--------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBC--------CCTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred ccCHHHHhCCcCCCEEEccCCCcc--------ccCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 555555666666666666666543 22345666666666666666665554433
No 328
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=6.6e-26 Score=256.32 Aligned_cols=186 Identities=12% Similarity=0.173 Sum_probs=146.0
Q ss_pred CCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCC-----CChhhHHHHHHHHhccCCCceeeEEeEEecCCceEEE
Q 042086 518 DVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEM-----VPQPEFVNEIKTLTELRHRSIVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 518 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 592 (784)
...+.||+|+||.||+|.. .++.+++|+......... ...+.|.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 478889998654321111 0134589999999999999999766666677788999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCC
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKP 672 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 672 (784)
|||+++|+|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999865 457899999999999999 9999999999999998 999999999998754
Q ss_pred CCCc-------cccccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCC
Q 042086 673 DSSN-------CTELVGTFGYIAPELVYT--MKVTEKCDVYSFGVLALEVIKGDHPR 720 (784)
Q Consensus 673 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslGv~l~elltg~~p~ 720 (784)
.... .....||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 135689999999999976 56788899999999999888887765
No 329
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=1.6e-26 Score=249.82 Aligned_cols=258 Identities=19% Similarity=0.136 Sum_probs=143.7
Q ss_pred EeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCC----CCCCCCC-CCCEEEccCCccCCCCCcCccCC-----CcC
Q 042086 82 LDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIP----PVIGNLK-FLYHLDLSENQLSGSIPPTLGNL-----SNL 151 (784)
Q Consensus 82 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~L 151 (784)
++|+.|+++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5677777777777666666667777777777776555 5666676 77777777777776666666554 777
Q ss_pred cEEeecCCCcccccCCccccc-----cccceeeccccccCCCcccccc----C-ccCCceeeccccccCCccc----hhh
Q 042086 152 AVLHLYGNSLSGSIPSIIGNL-----KSLFYLHLSSNQLSGSIPISLG----N-LSNLVVLHLFENSLFGSIP----SIL 217 (784)
Q Consensus 152 ~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~~~----~-l~~L~~L~L~~n~l~~~~~----~~l 217 (784)
++|+|++|.+++..+..+... ++|++|+|++|.+++..+..+. . .++|++|+|++|+++.... ..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 777777777776555443332 6777777777777655444332 2 2467777777776654332 233
Q ss_pred hccc-ccceeccCCCccccccCCCCc----CC-CCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCcccc
Q 042086 218 GNLK-MLLHLGLSTNHLSGVIPLSIG----NL-NNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALG 291 (784)
Q Consensus 218 ~~l~-~L~~L~L~~n~l~~~~~~~l~----~l-~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 291 (784)
..++ +|++|+|++|++++..+..++ .+ ++|++|+|++|+++.... . .++..+.
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~-~--------------------~l~~~l~ 221 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSY-A--------------------ELAYIFS 221 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH-H--------------------HHHHHHH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHH-H--------------------HHHHHHh
Confidence 3343 666666666666654443222 22 355555555555441110 0 0222222
Q ss_pred C-CCccceeecccCccCCCCcc----cccccccceEEecccccccCCC-------chhhhcccccCeeccCCcccccccc
Q 042086 292 S-LTELEYLDLSTNKLGNSIPE----TLGNLLKLHYLNLSNNQFRKGF-------PVELEKLIQLSELDLSLNILEGKIP 359 (784)
Q Consensus 292 ~-l~~L~~L~Ls~n~l~~~~~~----~l~~l~~L~~L~ls~N~l~~~~-------~~~~~~l~~L~~L~Ls~N~l~~~~~ 359 (784)
. .++|++|+|++|.+++..+. .+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2 22455555555555443321 2233445555555555533322 2234455556666666666655444
Q ss_pred c
Q 042086 360 C 360 (784)
Q Consensus 360 ~ 360 (784)
.
T Consensus 302 ~ 302 (362)
T 3goz_A 302 I 302 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.5e-24 Score=223.44 Aligned_cols=206 Identities=28% Similarity=0.273 Sum_probs=106.1
Q ss_pred cccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcc
Q 042086 169 IGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLI 248 (784)
Q Consensus 169 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 248 (784)
+.++++|+++++++|.++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 344555556666665555 3444332 4556666666666555555666666666666666666543222 4445555
Q ss_pred eEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccc
Q 042086 249 GLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNN 328 (784)
Q Consensus 249 ~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N 328 (784)
+|+|++|+++ .+|..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 5555555554 34444444455555555555555444444555555555555555554444444444444444444444
Q ss_pred cccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccC
Q 042086 329 QFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPI 406 (784)
Q Consensus 329 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 406 (784)
++++..+ ..+..+++|+.|+|++|+++ .+|..+..+.+|+.++|++|+|.|.+
T Consensus 159 ~l~~l~~------------------------~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 159 NLTELPA------------------------GLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSCCCT------------------------TTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cCCccCH------------------------HHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 4444333 33444555555555555555 23444444555666666666665543
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.2e-24 Score=223.72 Aligned_cols=204 Identities=28% Similarity=0.266 Sum_probs=142.5
Q ss_pred ccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCccccccccccc
Q 042086 193 LGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSL 272 (784)
Q Consensus 193 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L 272 (784)
+.++++++.+++++|+++.. |..+. ++|+.|+|++|.+++..+..|.++ ++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l-------------------------~~L 57 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPY-------------------------TRL 57 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTC-------------------------TTC
T ss_pred ccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcC-------------------------CCC
Confidence 44555666666666666532 22221 355556666666555444444444 455
Q ss_pred ceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCc
Q 042086 273 NYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLN 352 (784)
Q Consensus 273 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 352 (784)
++|++++|.+++..+ ...+++|++|++++|.++ .+|..+..+++|++|++++|++++..+..|..+++|+.|+|++|
T Consensus 58 ~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 58 TQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 555555555543222 145667777777777776 56667777778888888888888766777888888888888888
Q ss_pred cccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCC-CCCcCCCcccccCCCCCCC
Q 042086 353 ILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNS-RIFQYDPMEALQGNKGLCG 428 (784)
Q Consensus 353 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 428 (784)
++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++. +|.. ..........+.+||+.|.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCc
Confidence 8887767778889999999999999998888889999999999999999995 5543 2233445557789999886
No 332
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.4e-26 Score=252.79 Aligned_cols=189 Identities=24% Similarity=0.205 Sum_probs=97.5
Q ss_pred cCccCCceeeccccccCC----ccchhhhcccccceeccCCCccccccCCCCc----CC---------CCcceEEecCCC
Q 042086 194 GNLSNLVVLHLFENSLFG----SIPSILGNLKMLLHLGLSTNHLSGVIPLSIG----NL---------NNLIGLYLYDNQ 256 (784)
Q Consensus 194 ~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~----~l---------~~L~~L~L~~n~ 256 (784)
..+++|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 344555555555555544 2444455555555555555555433222222 11 556666666665
Q ss_pred CCCCCcc---cccccccccceEeccCccccC-----CCCccccCCCccceeecccCccC----CCCcccccccccceEEe
Q 042086 257 LSVGEIP---IEIGKLSSLNYLVLNGNQLYG-----NLPRALGSLTELEYLDLSTNKLG----NSIPETLGNLLKLHYLN 324 (784)
Q Consensus 257 l~~~~~~---~~l~~l~~L~~L~l~~n~l~~-----~~~~~l~~l~~L~~L~Ls~n~l~----~~~~~~l~~l~~L~~L~ 324 (784)
++...++ ..+..+++|++|++++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 5433333 244455666666666666652 23335556666666666666664 34455555666666666
Q ss_pred cccccccCC----Cchhhhc--ccccCeeccCCccccc----cccccc-cccccccEEecCCCccCCCC
Q 042086 325 LSNNQFRKG----FPVELEK--LIQLSELDLSLNILEG----KIPCEI-CNMESLEKLNLSHNNFSGLI 382 (784)
Q Consensus 325 ls~N~l~~~----~~~~~~~--l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~~~ 382 (784)
|++|++++. ++..+.. +++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 666666543 2333322 5555555555555554 244444 33455555555555555443
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=3.7e-26 Score=246.97 Aligned_cols=256 Identities=22% Similarity=0.168 Sum_probs=141.7
Q ss_pred EEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCC----cCccCCC-cCcEEeecCCCcccccCCccccc-----cc
Q 042086 105 IMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIP----PTLGNLS-NLAVLHLYGNSLSGSIPSIIGNL-----KS 174 (784)
Q Consensus 105 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l-----~~ 174 (784)
++.|+.|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35667777777777666666667777777777776555 5556666 67777777777666555555554 56
Q ss_pred cceeeccccccCCCccccccC----c-cCCceeeccccccCCccchhhhc-----ccccceeccCCCccccccCCCCcCC
Q 042086 175 LFYLHLSSNQLSGSIPISLGN----L-SNLVVLHLFENSLFGSIPSILGN-----LKMLLHLGLSTNHLSGVIPLSIGNL 244 (784)
Q Consensus 175 L~~L~L~~n~l~~~~~~~~~~----l-~~L~~L~L~~n~l~~~~~~~l~~-----l~~L~~L~L~~n~l~~~~~~~l~~l 244 (784)
|++|+|++|.+++..+..+.. + ++|++|+|++|+++...+..+.. .++|++|+|++|++++....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD----- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH-----
Confidence 666666666666544443222 2 45555555555554444433322 13444444444444422111
Q ss_pred CCcceEEecCCCCCCCCccccccccc-ccceEeccCccccCCCCcccc----CC-CccceeecccCccCCC----Ccccc
Q 042086 245 NNLIGLYLYDNQLSVGEIPIEIGKLS-SLNYLVLNGNQLYGNLPRALG----SL-TELEYLDLSTNKLGNS----IPETL 314 (784)
Q Consensus 245 ~~L~~L~L~~n~l~~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~l~----~l-~~L~~L~Ls~n~l~~~----~~~~l 314 (784)
.++..+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.+++. ++..+
T Consensus 157 ----------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l 220 (362)
T 3goz_A 157 ----------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIF 220 (362)
T ss_dssp ----------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred ----------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHH
Confidence 1222333333 666777777766655443333 33 4777777777777653 23334
Q ss_pred cc-cccceEEecccccccCCCchh----hhcccccCeeccCCccccccc-------cccccccccccEEecCCCccCCC
Q 042086 315 GN-LLKLHYLNLSNNQFRKGFPVE----LEKLIQLSELDLSLNILEGKI-------PCEICNMESLEKLNLSHNNFSGL 381 (784)
Q Consensus 315 ~~-l~~L~~L~ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~~-------~~~~~~l~~L~~L~L~~N~l~~~ 381 (784)
.. .++|++|+|++|++++..+.. +..+++|+.|+|++|.+.+.. +..+..+++|+.|++++|++...
T Consensus 221 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 221 SSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred hcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 44 247777777777776644422 344566666666666643222 22344445555555555555444
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=4.3e-24 Score=216.57 Aligned_cols=178 Identities=20% Similarity=0.245 Sum_probs=95.9
Q ss_pred cccEEeCCCCcccccCCCCcCCCCCCCEEEccCCc-ccccCCCCCCCCCCCCEEEccC-CccCCCCCcCccCCCcCcEEe
Q 042086 78 SLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNS-LSASIPPVIGNLKFLYHLDLSE-NQLSGSIPPTLGNLSNLAVLH 155 (784)
Q Consensus 78 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~ 155 (784)
+|++|+|++|+|++..+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55666666666665555556666666666666664 5544445555666666666665 555544445555556666666
Q ss_pred ecCCCcccccCCccccccccc---eeecccc-ccCCCccccccCccCCc-eeeccccccCCccchhhhcccccceeccCC
Q 042086 156 LYGNSLSGSIPSIIGNLKSLF---YLHLSSN-QLSGSIPISLGNLSNLV-VLHLFENSLFGSIPSILGNLKMLLHLGLST 230 (784)
Q Consensus 156 L~~n~l~~~~~~~l~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 230 (784)
|++|.+++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ .|++++|+++...+..|.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 66665553 343 55555555 5555555 55544444455555555 5555555555333333333 4555555555
Q ss_pred Cc-cccccCCCCcCC-CCcceEEecCCCCC
Q 042086 231 NH-LSGVIPLSIGNL-NNLIGLYLYDNQLS 258 (784)
Q Consensus 231 n~-l~~~~~~~l~~l-~~L~~L~L~~n~l~ 258 (784)
|+ +++..+..|.++ ++|+.|++++|+++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 53 554444444444 44444444444443
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=9.3e-26 Score=241.43 Aligned_cols=237 Identities=21% Similarity=0.235 Sum_probs=123.6
Q ss_pred CCcccceeEEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCC--CCCCEEEccCCcccccCCCCCCCC
Q 042086 47 SPCAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNL--TNLAIMYLYRNSLSASIPPVIGNL 124 (784)
Q Consensus 47 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~l~~l 124 (784)
-|..|.++.|++ ..++.||+++|++. +..+..+ ++++.|++++|.+++..+. +..+
T Consensus 35 vc~~W~~~~~~~------------------~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~ 92 (336)
T 2ast_B 35 VCKRWYRLASDE------------------SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSP 92 (336)
T ss_dssp SCHHHHHHHTCS------------------TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCC
T ss_pred HHHHHHHHhcCc------------------hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccC
Confidence 355788877653 23678888888776 3445555 6677777777766655444 3456
Q ss_pred CCCCEEEccCCccCCC-CCcCccCCCcCcEEeecCCCcccccCCccccccccceeecccc-ccCCCccccccCccCCcee
Q 042086 125 KFLYHLDLSENQLSGS-IPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSN-QLSGSIPISLGNLSNLVVL 202 (784)
Q Consensus 125 ~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L 202 (784)
++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~-------------- 158 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF-------------- 158 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH--------------
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH--------------
Confidence 6666666666665543 4445555555555555555555444444445555555555555 33321
Q ss_pred eccccccCCccchhhhcccccceeccCCC-ccccc-cCCCCcCCC-CcceEEecCC--CCCCCCcccccccccccceEec
Q 042086 203 HLFENSLFGSIPSILGNLKMLLHLGLSTN-HLSGV-IPLSIGNLN-NLIGLYLYDN--QLSVGEIPIEIGKLSSLNYLVL 277 (784)
Q Consensus 203 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~-~L~~L~L~~n--~l~~~~~~~~l~~l~~L~~L~l 277 (784)
.++..+.++++|++|++++| .+++. ++..+..++ +|++|++++| .++...++..+..+++|++|++
T Consensus 159 ---------~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 159 ---------ALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp ---------HHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred ---------HHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 13333444445555555554 44432 233333444 4444444444 2222233434445555666666
Q ss_pred cCcc-ccCCCCccccCCCccceeecccCc-cCCCCcccccccccceEEecccc
Q 042086 278 NGNQ-LYGNLPRALGSLTELEYLDLSTNK-LGNSIPETLGNLLKLHYLNLSNN 328 (784)
Q Consensus 278 ~~n~-l~~~~~~~l~~l~~L~~L~Ls~n~-l~~~~~~~l~~l~~L~~L~ls~N 328 (784)
++|. +++..+..+..+++|++|++++|. +.......+.++++|+.|++++|
T Consensus 230 ~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 6555 444444555555666666666653 22111123445555555555555
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.2e-25 Score=240.66 Aligned_cols=252 Identities=18% Similarity=0.181 Sum_probs=133.2
Q ss_pred CCEEEccCCccCCCCCcCccCC--CcCcEEeecCCCcccccCCccccccccceeeccccccCCC-ccccccCccCCceee
Q 042086 127 LYHLDLSENQLSGSIPPTLGNL--SNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGS-IPISLGNLSNLVVLH 203 (784)
Q Consensus 127 L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~ 203 (784)
++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 556666666554 3344444 5666666666666654443 34566666666666666544 555566666666666
Q ss_pred ccccccCCccchhhhcccccceeccCCC-ccccc-cCCCCcCCCCcceEEecCC-CCCCCCccccccccc-ccceEeccC
Q 042086 204 LFENSLFGSIPSILGNLKMLLHLGLSTN-HLSGV-IPLSIGNLNNLIGLYLYDN-QLSVGEIPIEIGKLS-SLNYLVLNG 279 (784)
Q Consensus 204 L~~n~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~L~~n-~l~~~~~~~~l~~l~-~L~~L~l~~ 279 (784)
|++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++| .++...++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666666555666666666666666666 45532 3444455555555555555 554222333444445 555555555
Q ss_pred ccccCCCCccccCCCccceeecccCccC-CCCcccccccccceEEeccccc-ccCCCchhhhcccccCeeccCCcc-ccc
Q 042086 280 NQLYGNLPRALGSLTELEYLDLSTNKLG-NSIPETLGNLLKLHYLNLSNNQ-FRKGFPVELEKLIQLSELDLSLNI-LEG 356 (784)
Q Consensus 280 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~-~~~~~~l~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~ 356 (784)
|.+ .++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +..
T Consensus 205 ~~~----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~ 262 (336)
T 2ast_B 205 YRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP 262 (336)
T ss_dssp CGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCG
T ss_pred Ccc----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCH
Confidence 521 222 2233344445555555555555 444444455555555555555552 222
Q ss_pred cccccccccccccEEecCCCccCCCCcccccCc-ccceEEEcCCCCCcccCCC
Q 042086 357 KIPCEICNMESLEKLNLSHNNFSGLIPSCFEGM-HGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 357 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~p~ 408 (784)
.....+..+++|+.|++++| ++ ...+..+ ..|..|++++|++++..|.
T Consensus 263 ~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 263 ETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp GGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred HHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCC
Confidence 22224555666666666666 22 1223333 2355555666666665554
No 337
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=4.4e-26 Score=263.74 Aligned_cols=323 Identities=14% Similarity=0.081 Sum_probs=234.9
Q ss_pred CCCcccEEeCCCCccccc----CCCCcCCCCCCCEEEccCCccc----ccCCCCCCCCCCCCEEEccCCccCCCCCcCcc
Q 042086 75 NLKSLSTLDLSKNKLNGS----IPFSFGNLTNLAIMYLYRNSLS----ASIPPVIGNLKFLYHLDLSENQLSGSIPPTLG 146 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 146 (784)
.+++|++|+|++|.+++. ++..+..+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 578889999999888765 3334567788888888888876 3344455677888888888887664 334444
Q ss_pred CCCc---------------------------CcEEeecCCCcccccCCccccccccceeeccccccCCCcc-ccccCccC
Q 042086 147 NLSN---------------------------LAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIP-ISLGNLSN 198 (784)
Q Consensus 147 ~l~~---------------------------L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~ 198 (784)
.+++ |+.|+++++. ...+|..+..+++|++|+|++|.+++... ..+..+++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 4444 4444444432 23566777889999999999999875443 44688999
Q ss_pred CceeeccccccCCccchhhhcccccceeccC-----------CCccccccC-CCCcCCCCcceEEecCCCCCCCCccccc
Q 042086 199 LVVLHLFENSLFGSIPSILGNLKMLLHLGLS-----------TNHLSGVIP-LSIGNLNNLIGLYLYDNQLSVGEIPIEI 266 (784)
Q Consensus 199 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~-----------~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~l 266 (784)
|++|+++++.....++..+..+++|++|+++ .|.+++... ..+..+++|++|+++.|+++. ..+..+
T Consensus 320 L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~-~~~~~l 398 (592)
T 3ogk_B 320 LEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITN-ESLESI 398 (592)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCH-HHHHHH
T ss_pred CCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccH-HHHHHH
Confidence 9999999443334455566788999999999 367764432 224568999999999998873 333345
Q ss_pred cc-ccccceEecc----CccccCC-----CCccccCCCccceeecccCc--cCCCCcccccc-cccceEEecccccccC-
Q 042086 267 GK-LSSLNYLVLN----GNQLYGN-----LPRALGSLTELEYLDLSTNK--LGNSIPETLGN-LLKLHYLNLSNNQFRK- 332 (784)
Q Consensus 267 ~~-l~~L~~L~l~----~n~l~~~-----~~~~l~~l~~L~~L~Ls~n~--l~~~~~~~l~~-l~~L~~L~ls~N~l~~- 332 (784)
.. +++|+.|+++ .|.+++. ++..+..+++|++|++++|. +++..+..+.. +++|++|+|++|++++
T Consensus 399 ~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 478 (592)
T 3ogk_B 399 GTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE 478 (592)
T ss_dssp HHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH
T ss_pred HhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH
Confidence 44 8899999996 6777753 33346678999999998544 66655555554 8899999999999986
Q ss_pred CCchhhhcccccCeeccCCcccccc-ccccccccccccEEecCCCccCCCCccccc-CcccceEEEcCCC
Q 042086 333 GFPVELEKLIQLSELDLSLNILEGK-IPCEICNMESLEKLNLSHNNFSGLIPSCFE-GMHGLSCIDVSYN 400 (784)
Q Consensus 333 ~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~l~l~~N 400 (784)
.++..+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.....+. .++.+....+..+
T Consensus 479 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 479 GLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 3455668899999999999998765 344456789999999999999877554443 5677776666554
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=6e-26 Score=247.79 Aligned_cols=245 Identities=20% Similarity=0.197 Sum_probs=133.1
Q ss_pred CCCCcCCCCCCCEEEccCCccccc----CCCCCCCCCCCCEEEccCC---ccCCCCCcCc-------cCCCcCcEEeecC
Q 042086 93 IPFSFGNLTNLAIMYLYRNSLSAS----IPPVIGNLKFLYHLDLSEN---QLSGSIPPTL-------GNLSNLAVLHLYG 158 (784)
Q Consensus 93 ~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~L~~ 158 (784)
++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 455566677777777777777654 3344667777777777775 3444445444 4566666677766
Q ss_pred CCccc----ccCCccccccccceeeccccccCCCcccccc----Cc---------cCCceeeccccccC-Cccc---hhh
Q 042086 159 NSLSG----SIPSIIGNLKSLFYLHLSSNQLSGSIPISLG----NL---------SNLVVLHLFENSLF-GSIP---SIL 217 (784)
Q Consensus 159 n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~----~l---------~~L~~L~L~~n~l~-~~~~---~~l 217 (784)
|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ ..++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 66665 3555566666666666666666533332222 22 56666666666654 2223 344
Q ss_pred hcccccceeccCCCcccc-----ccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccC
Q 042086 218 GNLKMLLHLGLSTNHLSG-----VIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGS 292 (784)
Q Consensus 218 ~~l~~L~~L~L~~n~l~~-----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~ 292 (784)
..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++... .+.+|..+..
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g---------------------~~~l~~~l~~ 242 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG---------------------SSALAIALKS 242 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH---------------------HHHHHHHGGG
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH---------------------HHHHHHHHcc
Confidence 455556666666665551 22224444444444444444442100 0234444555
Q ss_pred CCccceeecccCccCCC----Cccccc--ccccceEEecccccccC----CCchhh-hcccccCeeccCCccccccc
Q 042086 293 LTELEYLDLSTNKLGNS----IPETLG--NLLKLHYLNLSNNQFRK----GFPVEL-EKLIQLSELDLSLNILEGKI 358 (784)
Q Consensus 293 l~~L~~L~Ls~n~l~~~----~~~~l~--~l~~L~~L~ls~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~ 358 (784)
+++|++|+|++|.+++. ++..+. .+++|++|+|++|.+++ .+|..+ .++++|+.|+|++|++++..
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 55555555555555443 233332 25556666666666555 344444 44566666666666666544
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=2.5e-24 Score=227.28 Aligned_cols=205 Identities=22% Similarity=0.203 Sum_probs=107.0
Q ss_pred CCCCEEEccCCcccccCCCCC--CCCCCCCEEEccCCccCCCCC----cCccCCCcCcEEeecCCCcccccCCccccccc
Q 042086 101 TNLAIMYLYRNSLSASIPPVI--GNLKFLYHLDLSENQLSGSIP----PTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKS 174 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 174 (784)
++|++|+|++|.+++..|..+ +.+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..|.++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445566666665555555555 555556666666665554433 22334555555566555555555555555555
Q ss_pred cceeeccccccCCC--c--cccccCccCCceeeccccccCCccc--h-hhhcccccceeccCCCccccccCCCCcCCCCc
Q 042086 175 LFYLHLSSNQLSGS--I--PISLGNLSNLVVLHLFENSLFGSIP--S-ILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNL 247 (784)
Q Consensus 175 L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~n~l~~~~~--~-~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 247 (784)
|++|+|++|++.+. + +..+..+++|++|+|++|+++.... . .++++++|++|+|++|++++..|..+..+.
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-- 248 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM-- 248 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC--
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc--
Confidence 55555555555431 1 1122455555555555555542111 1 234455555555555555554444433331
Q ss_pred ceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEeccc
Q 042086 248 IGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSN 327 (784)
Q Consensus 248 ~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~ 327 (784)
.+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|+|++
T Consensus 249 --------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 249 --------------------WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDG 303 (310)
T ss_dssp --------------------CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSS
T ss_pred --------------------CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcC
Confidence 1145555555555555 3444442 5666666666666642 22 45556666666666
Q ss_pred ccccC
Q 042086 328 NQFRK 332 (784)
Q Consensus 328 N~l~~ 332 (784)
|+++.
T Consensus 304 N~l~~ 308 (310)
T 4glp_A 304 NPFLV 308 (310)
T ss_dssp TTTSC
T ss_pred CCCCC
Confidence 66653
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.5e-24 Score=224.14 Aligned_cols=108 Identities=18% Similarity=0.112 Sum_probs=53.3
Q ss_pred CCCEEEccCCccCCCCCc---CccCCCcCcEEeecCCCcccccCCcc--ccccccceeeccccccCCCcc----ccccCc
Q 042086 126 FLYHLDLSENQLSGSIPP---TLGNLSNLAVLHLYGNSLSGSIPSII--GNLKSLFYLHLSSNQLSGSIP----ISLGNL 196 (784)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~---~l~~l~~L~~L~L~~n~l~~~~~~~l--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 196 (784)
.++.|.++++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 456666666655421100 11123456666666666666655555 556666666666666654332 122334
Q ss_pred cCCceeeccccccCCccchhhhcccccceeccCCCcc
Q 042086 197 SNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL 233 (784)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 233 (784)
++|++|+|++|++.+..+..|+++++|++|+|++|++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 181 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPG 181 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCC
Confidence 4444444444444444444444444444444444443
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.8e-23 Score=209.59 Aligned_cols=197 Identities=20% Similarity=0.189 Sum_probs=126.6
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCc-cCCCCCcCccCCCcCcEEeecC-CCcccccCCcccccccccee
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQ-LSGSIPPTLGNLSNLAVLHLYG-NSLSGSIPSIIGNLKSLFYL 178 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L 178 (784)
++|++|+|++|++++..+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 378888888888887777788888888888888886 7766666778888888888887 78876666777778888888
Q ss_pred eccccccCCCccccccCccCCc---eeecccc-ccCCccchhhhcccccc-eeccCCCccccccCCCCcCCCCcceEEec
Q 042086 179 HLSSNQLSGSIPISLGNLSNLV---VLHLFEN-SLFGSIPSILGNLKMLL-HLGLSTNHLSGVIPLSIGNLNNLIGLYLY 253 (784)
Q Consensus 179 ~L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 253 (784)
++++|.+++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++...+..|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~------------ 176 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF------------ 176 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT------------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc------------
Confidence 888888774 454 66666666 6666666 56555555555555555 55555555552222222
Q ss_pred CCCCCCCCcccccccccccceEeccCcc-ccCCCCccccCC-CccceeecccCccCCCCcccccccccceEEecccc
Q 042086 254 DNQLSVGEIPIEIGKLSSLNYLVLNGNQ-LYGNLPRALGSL-TELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNN 328 (784)
Q Consensus 254 ~n~l~~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~l~~l-~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N 328 (784)
..++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 177 --------------~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 177 --------------NGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp --------------TTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred --------------CCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 22455555555553 554444555555 6666666666666532 222 3445555555544
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=5.1e-23 Score=216.75 Aligned_cols=107 Identities=31% Similarity=0.450 Sum_probs=49.7
Q ss_pred cccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccC
Q 042086 266 IGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLS 345 (784)
Q Consensus 266 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 345 (784)
+..+++|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+
T Consensus 125 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~ 198 (308)
T 1h6u_A 125 LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLI 198 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCC
T ss_pred hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCC
Confidence 3444444444444444443221 4444555555555555543222 4445555555555555544222 44455555
Q ss_pred eeccCCccccccccccccccccccEEecCCCccCC
Q 042086 346 ELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSG 380 (784)
Q Consensus 346 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 380 (784)
.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 199 ~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 199 EVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp EEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred EEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 55555555543321 4445555555555555543
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=5.8e-23 Score=216.37 Aligned_cols=213 Identities=23% Similarity=0.377 Sum_probs=165.8
Q ss_pred cccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEe
Q 042086 173 KSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYL 252 (784)
Q Consensus 173 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 252 (784)
.++..+.+..+.+.+.+ .+..+++|++|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L 92 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEc
Confidence 33444455555554322 234556666667766666532 2 46667777777777777765443 677777777777
Q ss_pred cCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccC
Q 042086 253 YDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRK 332 (784)
Q Consensus 253 ~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~ 332 (784)
++|+++ .++ .+..+++|++|++++|++++. + .+..+++|++|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 93 ~~n~l~--~~~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 93 SGNPLK--NVS-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CSCCCS--CCG-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCcCC--Cch-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 777776 333 577888999999999999864 3 38999999999999999996544 8999999999999999998
Q ss_pred CCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcc
Q 042086 333 GFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRG 404 (784)
Q Consensus 333 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 404 (784)
..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 444 9999999999999999996544 8899999999999999998764 8899999999999999986
No 344
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=9.7e-26 Score=260.98 Aligned_cols=326 Identities=17% Similarity=0.152 Sum_probs=180.6
Q ss_pred CCCcccEEeCCCCcccccCCCCcC-CCCCCCEEEccCC-ccccc-CCCCCCCCCCCCEEEccCCccCCCCCcCcc----C
Q 042086 75 NLKSLSTLDLSKNKLNGSIPFSFG-NLTNLAIMYLYRN-SLSAS-IPPVIGNLKFLYHLDLSENQLSGSIPPTLG----N 147 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~----~ 147 (784)
.+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 345666777777666655555553 4666777777666 44332 333334566677777776666654433333 4
Q ss_pred CCcCcEEeecCCC--cccc-cCCccccccccceeecccc-ccCCCccccccCccCCceeeccccc---------------
Q 042086 148 LSNLAVLHLYGNS--LSGS-IPSIIGNLKSLFYLHLSSN-QLSGSIPISLGNLSNLVVLHLFENS--------------- 208 (784)
Q Consensus 148 l~~L~~L~L~~n~--l~~~-~~~~l~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~--------------- 208 (784)
+++|++|+|++|. ++.. ++..+.++++|++|+|++| .+. .++..+..+++|+.|+++.+.
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l 261 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVAL 261 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHH
Confidence 4566677766665 2211 1112234466666666666 233 244445555555555543321
Q ss_pred -----------c----CCccchhhhcccccceeccCCCccccccC-CCCcCCCCcceEEecCCCCCCCCccccccccccc
Q 042086 209 -----------L----FGSIPSILGNLKMLLHLGLSTNHLSGVIP-LSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSL 272 (784)
Q Consensus 209 -----------l----~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L 272 (784)
+ ...++..+..+++|++|+|++|.+++... ..+..+++|++|++++| +....++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 1 11233334456677777777777654322 22446677777777766 3322223223346677
Q ss_pred ceEeccC---------ccccCCCCcccc-CCCccceeecccCccCCCCccccc-ccccceEEecc--c----ccccCC--
Q 042086 273 NYLVLNG---------NQLYGNLPRALG-SLTELEYLDLSTNKLGNSIPETLG-NLLKLHYLNLS--N----NQFRKG-- 333 (784)
Q Consensus 273 ~~L~l~~---------n~l~~~~~~~l~-~l~~L~~L~Ls~n~l~~~~~~~l~-~l~~L~~L~ls--~----N~l~~~-- 333 (784)
++|++.+ +.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++..
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~ 420 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCT
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCch
Confidence 7777632 334322222222 366777777777777655444444 46777777777 3 445421
Q ss_pred ---CchhhhcccccCeeccCCccccccccccccc-cccccEEecCCCccCCCCcccc-cCcccceEEEcCCCCCc
Q 042086 334 ---FPVELEKLIQLSELDLSLNILEGKIPCEICN-MESLEKLNLSHNNFSGLIPSCF-EGMHGLSCIDVSYNELR 403 (784)
Q Consensus 334 ---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~ 403 (784)
++..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|+++
T Consensus 421 ~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 421 DIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 122255667777777766 555555555554 6777777777777765554444 45677777777777764
No 345
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=3.7e-25 Score=256.13 Aligned_cols=341 Identities=14% Similarity=0.083 Sum_probs=245.8
Q ss_pred CCeEEEEeCCCcccC--------CCCcccEEeCCCC-ccccc-CCCCcCCCCCCCEEEccCCcccccCCCCC----CCCC
Q 042086 60 KRVISINLSTVGLKG--------NLKSLSTLDLSKN-KLNGS-IPFSFGNLTNLAIMYLYRNSLSASIPPVI----GNLK 125 (784)
Q Consensus 60 ~~v~~l~l~~~~~~~--------~l~~l~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~p~~l----~~l~ 125 (784)
.++..+++....+.+ .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 356778877654332 5789999999999 66643 44445689999999999999876554433 4778
Q ss_pred CCCEEEccCCc--cCCC-CCcCccCCCcCcEEeecCC-CcccccCCccccccccceeeccccc-----------------
Q 042086 126 FLYHLDLSENQ--LSGS-IPPTLGNLSNLAVLHLYGN-SLSGSIPSIIGNLKSLFYLHLSSNQ----------------- 184 (784)
Q Consensus 126 ~L~~L~L~~n~--l~~~-~p~~l~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~n~----------------- 184 (784)
+|++|+|++|. +... ++..+..+++|++|+|++| .+. .++..+.++++|++|+++.+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 99999999997 2211 1112244699999999998 444 377777788888888865542
Q ss_pred ---------cCC----CccccccCccCCceeeccccccCCcc-chhhhcccccceeccCCCcccccc-CCCCcCCCCcce
Q 042086 185 ---------LSG----SIPISLGNLSNLVVLHLFENSLFGSI-PSILGNLKMLLHLGLSTNHLSGVI-PLSIGNLNNLIG 249 (784)
Q Consensus 185 ---------l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~ 249 (784)
+.. .++..+..+++|++|+|++|.++... ...+.++++|+.|++++| ++... +.....+++|++
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 111 23333346789999999999976443 334668899999999998 54322 222345899999
Q ss_pred EEecC---------CCCCCCCcccccccccccceEeccCccccCCCCcccc-CCCccceeecc--c----CccCCCC---
Q 042086 250 LYLYD---------NQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALG-SLTELEYLDLS--T----NKLGNSI--- 310 (784)
Q Consensus 250 L~L~~---------n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~Ls--~----n~l~~~~--- 310 (784)
|++.+ +.++...+......+++|+.|.+..|.+++.....+. .+++|+.|+++ + |.+++..
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 99943 4554322222223588999999999999876555565 58999999999 4 5666321
Q ss_pred --cccccccccceEEecccccccCCCchhhhc-ccccCeeccCCccccccccccc-cccccccEEecCCCccCCCCcc-c
Q 042086 311 --PETLGNLLKLHYLNLSNNQFRKGFPVELEK-LIQLSELDLSLNILEGKIPCEI-CNMESLEKLNLSHNNFSGLIPS-C 385 (784)
Q Consensus 311 --~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~-~ 385 (784)
+..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+. .
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~ 501 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN 501 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH
Confidence 22366789999999987 677656666665 8999999999999987666665 6789999999999999655544 4
Q ss_pred ccCcccceEEEcCCCCCc
Q 042086 386 FEGMHGLSCIDVSYNELR 403 (784)
Q Consensus 386 ~~~l~~L~~l~l~~N~l~ 403 (784)
+..+++|+.|++++|+++
T Consensus 502 ~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 502 ASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp GGGGGGSSEEEEESSCCB
T ss_pred HHhCCCCCEEeeeCCCCC
Confidence 456899999999999874
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2e-22 Score=199.53 Aligned_cols=184 Identities=27% Similarity=0.268 Sum_probs=151.8
Q ss_pred cccceeEEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCC
Q 042086 49 CAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLY 128 (784)
Q Consensus 49 C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 128 (784)
|.|.+|.|...+ .+.+ ..+..++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|+.+++|+
T Consensus 7 C~~~~v~c~~~~-l~~~------p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 79 (208)
T 2o6s_A 7 CSGTTVECYSQG-RTSV------PTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLT 79 (208)
T ss_dssp EETTEEECCSSC-CSSC------CSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ECCCEEEecCCC-ccCC------CCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcC
Confidence 899999998542 1111 122346789999999999987777889999999999999999977777789999999
Q ss_pred EEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccc
Q 042086 129 HLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENS 208 (784)
Q Consensus 129 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 208 (784)
+|+|++|++++..+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.
T Consensus 80 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 80 YLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 99999999997777778899999999999999997777778899999999999999997767678889999999999998
Q ss_pred cCCccchhhhcccccceeccCCCccccccCCCCcCCCC
Q 042086 209 LFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNN 246 (784)
Q Consensus 209 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 246 (784)
+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 160 ~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 160 WDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp BCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 754 3457888889999999888887765543
No 347
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=6.1e-22 Score=202.16 Aligned_cols=181 Identities=24% Similarity=0.252 Sum_probs=128.9
Q ss_pred cceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecc
Q 042086 223 LLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLS 302 (784)
Q Consensus 223 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 302 (784)
.+.++++++.++ .+|..+. ++|+.|+|++|+++ ...+..+..+++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcC-ccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 445555555555 3333332 35556666666555 2223346666677777777777776666677777778888888
Q ss_pred cCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCC
Q 042086 303 TNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLI 382 (784)
Q Consensus 303 ~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 382 (784)
+|.+++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 88777666677777788888888888887766666777888888888888888666667788888888888888888887
Q ss_pred cccccCcccceEEEcCCCCCcccCC
Q 042086 383 PSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 383 p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
+..+..+++|+.|++++|+|.|..+
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHHhCCCCCCEEEeeCCceeCCcc
Confidence 7788888888888888888887633
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=4.2e-22 Score=214.00 Aligned_cols=221 Identities=20% Similarity=0.168 Sum_probs=116.4
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCC-cCccCCCcCcE-EeecCCCcccccCCcccccccccee
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIP-PTLGNLSNLAV-LHLYGNSLSGSIPSIIGNLKSLFYL 178 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~-L~L~~n~l~~~~~~~l~~l~~L~~L 178 (784)
+++++|+|++|+|+.+.+.+|+++++|++|+|++|++.+.+| .+|.++++|+. +.+++|+++...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 456666666666665444566666666666666666654443 34566666554 4455566665556666666666666
Q ss_pred eccccccCCCccccccCccCCceeeccc-cccCCccchhhhccc-ccceeccCCCccccccCCCCcCCCCcceEEecC-C
Q 042086 179 HLSSNQLSGSIPISLGNLSNLVVLHLFE-NSLFGSIPSILGNLK-MLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYD-N 255 (784)
Q Consensus 179 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-n 255 (784)
++++|++....+..+....++..|++.+ +++....+..|..+. .++.|+|++|+|+.+.+..| ...+|++|++.+ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 6666666655444555555566666643 445444444455443 35566666666663333322 334555555543 3
Q ss_pred CCCCCCccc-ccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccc
Q 042086 256 QLSVGEIPI-EIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNN 328 (784)
Q Consensus 256 ~l~~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N 328 (784)
.++ .+|. .|..+++|++|+|++|+|+...+..+.++++|+.+++ +.++ .+| .+.++++|+.++++++
T Consensus 189 ~l~--~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 189 NLE--ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TCC--CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred ccc--CCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 333 3332 3455555555555555555333333333333333222 1222 333 2455555555555543
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=5e-22 Score=213.36 Aligned_cols=239 Identities=20% Similarity=0.176 Sum_probs=170.7
Q ss_pred EEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccC-Cccccccccce-eeccc
Q 042086 105 IMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIP-SIIGNLKSLFY-LHLSS 182 (784)
Q Consensus 105 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~-L~L~~ 182 (784)
.++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| .+|.++++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4555666666 566655 3679999999999996666788999999999999999876555 56788888775 66677
Q ss_pred cccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCC-CccccccCCCCcCCC-CcceEEecCCCCCCC
Q 042086 183 NQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLST-NHLSGVIPLSIGNLN-NLIGLYLYDNQLSVG 260 (784)
Q Consensus 183 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~ 260 (784)
|+++...|..|..+++|++|++++|++....+..+....++..|++.+ |++....+..|..+. .++.|+|++|+++
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-- 167 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-- 167 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC--
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc--
Confidence 889877788889999999999999999877777777777788888855 677766666677664 5778888888876
Q ss_pred CcccccccccccceEeccC-ccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhh
Q 042086 261 EIPIEIGKLSSLNYLVLNG-NQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELE 339 (784)
Q Consensus 261 ~~~~~l~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~ 339 (784)
.++.......+|++|++.+ |.++...+..|..+++|+.|+|++|+|+...+..+.++++|+.+++ +.++ .+| .+.
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~ 243 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLE 243 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTT
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cch
Confidence 5666655667788888764 5565444456777788888888888887544444544444443332 2233 344 366
Q ss_pred cccccCeeccCCc
Q 042086 340 KLIQLSELDLSLN 352 (784)
Q Consensus 340 ~l~~L~~L~Ls~N 352 (784)
.+++|+.++++++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 6777777777654
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=7.5e-23 Score=211.90 Aligned_cols=166 Identities=17% Similarity=0.133 Sum_probs=128.0
Q ss_pred HHHHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCC---------------CChhhHHHHHHHHhccCC
Q 042086 509 EIVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEM---------------VPQPEFVNEIKTLTELRH 573 (784)
Q Consensus 509 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~h 573 (784)
.+......|.+.+.||+|+||.||+|+..+|+.||+|.++....... .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 44445667788899999999999999998899999999865322111 02456899999999999
Q ss_pred CceeeEEeEEecCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee
Q 042086 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL 653 (784)
Q Consensus 574 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 653 (784)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.|++|||+. +|+||||||+|||+
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 4 566665543 56799999999999988 522 12346999999999999999 99999999999999
Q ss_pred cCCCceEEeccccccccCCCCCccccccccccccccccccc----------CCcCcchhHHH
Q 042086 654 CLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYT----------MKVTEKCDVYS 705 (784)
Q Consensus 654 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDvws 705 (784)
+ ++.+||+|||+|+. +..|+|||++.. .++...+|+|.
T Consensus 227 ~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE-------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp E-TTEEEECCCTTCEE-------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred E-CCcEEEEECCCCeE-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9 99999999999974 334788998743 34445556654
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.8e-22 Score=227.96 Aligned_cols=209 Identities=26% Similarity=0.325 Sum_probs=137.9
Q ss_pred CCCCc-----cccee-EEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCC
Q 042086 45 KISPC-----AWFGI-QCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIP 118 (784)
Q Consensus 45 ~~~~C-----~w~gv-~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 118 (784)
+.+|| .|.|+ .|.. .+|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+|
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~------------------~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip 96 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLI------------------NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP 96 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHH------------------TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC
T ss_pred cCCccccccchhhhcccccc------------------CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc
Confidence 34677 79998 7752 257889999999987 67655 378999999999988 566
Q ss_pred CCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccC
Q 042086 119 PVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSN 198 (784)
Q Consensus 119 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 198 (784)
..+++|++|+|++|+|++ +|. +.. +|++|+|++|.|++ +|. .+++|++|+|++|.+++ +|. .+++
T Consensus 97 ---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~ 161 (571)
T 3cvr_A 97 ---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTS 161 (571)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTT
T ss_pred ---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCC
Confidence 457888899999888886 666 654 88888888888886 555 56788888888888885 554 4677
Q ss_pred CceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEecc
Q 042086 199 LVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLN 278 (784)
Q Consensus 199 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~ 278 (784)
|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| ....+.|+.|+|+
T Consensus 162 L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L------------------~~~~~~L~~L~Ls 215 (571)
T 3cvr_A 162 LEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN------------------HHSEETEIFFRCR 215 (571)
T ss_dssp CCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------------------------CCEEEECC
T ss_pred cCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh------------------hcccccceEEecC
Confidence 8888888887775 444 44 67777777777777 4444 332 33 0001122555555
Q ss_pred CccccCCCCccccCCCccceeecccCccCCCCccccccc
Q 042086 279 GNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNL 317 (784)
Q Consensus 279 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 317 (784)
+|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 216 ~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 216 ENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp SSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 55554 344444445555555555555555555544443
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=4.5e-21 Score=189.77 Aligned_cols=161 Identities=29% Similarity=0.291 Sum_probs=82.4
Q ss_pred CCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeecc
Q 042086 126 FLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLF 205 (784)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 205 (784)
+|++|+|++|++++..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444444444443333334444444444444444443333344445555555555555554333444555555555555
Q ss_pred ccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCC
Q 042086 206 ENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGN 285 (784)
Q Consensus 206 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~ 285 (784)
+|++++..+..|.++++|+.|++++|++++..+..|..+++|+.|++++|.+. ..+++|++|+++.|+++|.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~--------~~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD--------CTCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC--------CCTTTTHHHHHHHHHCTTT
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee--------cCCCCHHHHHHHHHhCCce
Confidence 55555444444555566666666666665544444555555555555555433 2234555666666666666
Q ss_pred CCccccCCC
Q 042086 286 LPRALGSLT 294 (784)
Q Consensus 286 ~~~~l~~l~ 294 (784)
+|..++.++
T Consensus 181 ip~~~~~l~ 189 (208)
T 2o6s_A 181 VRNSAGSVA 189 (208)
T ss_dssp BBCTTSSBC
T ss_pred eeccCcccc
Confidence 665555443
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=9.8e-21 Score=213.83 Aligned_cols=191 Identities=25% Similarity=0.290 Sum_probs=126.7
Q ss_pred CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeecc
Q 042086 102 NLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLS 181 (784)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 181 (784)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 77777777777775 565543 67777777777777 455 345677777777777775 555 444 67777777
Q ss_pred ccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCC
Q 042086 182 SNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGE 261 (784)
Q Consensus 182 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 261 (784)
+|.+++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|++++
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-------------------------- 174 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-------------------------- 174 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--------------------------
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC--------------------------
Confidence 777664 444 45566666666666554 232 34455555555555553
Q ss_pred cccccccccccceEeccCccccCCCCccccC-----CCccceeecccCccCCCCcccccccccceEEecccccccCCCch
Q 042086 262 IPIEIGKLSSLNYLVLNGNQLYGNLPRALGS-----LTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPV 336 (784)
Q Consensus 262 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-----l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~ 336 (784)
+|. +. ++|+.|+|++|+|+ .+|. +.. .+.|+.|+|++|.|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 175 lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 175 LPE-LP--ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred cch-hh--CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 333 32 45556666666655 3444 333 123399999999999 6888888899999999999999999999
Q ss_pred hhhcccc
Q 042086 337 ELEKLIQ 343 (784)
Q Consensus 337 ~~~~l~~ 343 (784)
.+..+..
T Consensus 249 ~l~~l~~ 255 (571)
T 3cvr_A 249 SLSQQTA 255 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 8888765
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=6e-21 Score=190.35 Aligned_cols=157 Identities=19% Similarity=0.204 Sum_probs=124.1
Q ss_pred eEEecCCCCCCCCcccccccccccceEeccCccccCCCC-ccccCCCccceeecccCccCCCCcccccccccceEEeccc
Q 042086 249 GLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLP-RALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSN 327 (784)
Q Consensus 249 ~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~ 327 (784)
.+++++|.++ .+|..+. ..+++|+|++|++++..+ ..|..+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 15 ~l~~s~n~l~--~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN--KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS--SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc--cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4455555544 3444332 345677777777776544 4577888888888888888877777888888888888888
Q ss_pred ccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 328 NQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 328 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|+|.|.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88888777788888888888888888888888888899999999999999999889999999999999999999998877
Q ss_pred CC
Q 042086 408 NS 409 (784)
Q Consensus 408 ~~ 409 (784)
-.
T Consensus 171 l~ 172 (220)
T 2v70_A 171 LA 172 (220)
T ss_dssp GH
T ss_pred hH
Confidence 43
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=8.8e-21 Score=189.14 Aligned_cols=157 Identities=20% Similarity=0.232 Sum_probs=129.5
Q ss_pred ceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEeccc
Q 042086 248 IGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSN 327 (784)
Q Consensus 248 ~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~ 327 (784)
+.++++++.++ .+|..+. ++|+.|++++|++++..+..|..+++|+.|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~--~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT--EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS--SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC--cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 34555555554 4454443 5788888888888877777888888888888888888887788888888899999999
Q ss_pred ccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 328 NQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 328 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
|+|+...+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|.++
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 98888767778888999999999999998888888999999999999999999888889999999999999999988766
Q ss_pred C
Q 042086 408 N 408 (784)
Q Consensus 408 ~ 408 (784)
-
T Consensus 170 l 170 (220)
T 2v9t_B 170 L 170 (220)
T ss_dssp G
T ss_pred c
Confidence 4
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=6.6e-20 Score=184.06 Aligned_cols=160 Identities=29% Similarity=0.309 Sum_probs=122.3
Q ss_pred CCCcccceeEEcCCCCeEEEEeCCCcccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCC
Q 042086 46 ISPCAWFGIQCNPAKRVISINLSTVGLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLK 125 (784)
Q Consensus 46 ~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 125 (784)
.+.|+|.+|.|... +++.+ ..+-.++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..++
T Consensus 16 ~~~Cs~~~v~c~~~-~l~~i------p~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 16 QCSCSGTTVDCRSK-RHASV------PAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp TCEEETTEEECTTS-CCSSC------CSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEEeCCEeEccCC-CcCcc------CCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCC
Confidence 46799999999743 22211 112236788888888888888888888888888888888888766666778888
Q ss_pred CCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeecc
Q 042086 126 FLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLF 205 (784)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 205 (784)
+|++|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 89 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 167 (229)
T 3e6j_A 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLF 167 (229)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 8888888888888766667788888888888888888 667777888888888888888886666667778888888888
Q ss_pred ccccCCcc
Q 042086 206 ENSLFGSI 213 (784)
Q Consensus 206 ~n~l~~~~ 213 (784)
+|.+....
T Consensus 168 ~N~~~c~c 175 (229)
T 3e6j_A 168 GNPWDCEC 175 (229)
T ss_dssp TSCBCTTB
T ss_pred CCCccCCc
Confidence 88776543
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=3.8e-20 Score=211.44 Aligned_cols=190 Identities=28% Similarity=0.341 Sum_probs=101.7
Q ss_pred CcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCC
Q 042086 151 LAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLST 230 (784)
Q Consensus 151 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 230 (784)
+..+.+..+.+.+..+ +..+++|+.|+|++|.+.. ++ .+..+++|+.|+|++|++++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3344444444443222 3344555555555555542 22 34455555555555555544333 55555555555555
Q ss_pred CccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCC
Q 042086 231 NHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSI 310 (784)
Q Consensus 231 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 310 (784)
|.+++ ++ .+..+++|+.|+|++|+++ .++ .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~--~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGIS--DIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCC--CCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCC--CCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 55553 12 4555555666666555554 222 455556666666666666543 44556666666666666666544
Q ss_pred cccccccccceEEecccccccCCCchhhhcccccCeeccCCcccccc
Q 042086 311 PETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGK 357 (784)
Q Consensus 311 ~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 357 (784)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 4 56666666666666666652 3456666666666666666543
No 358
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=3.7e-21 Score=225.52 Aligned_cols=219 Identities=24% Similarity=0.214 Sum_probs=113.8
Q ss_pred chHHHHHHHHHHHhccCCCccccCCCCCCCCCCCccccccCCCCCCCcccceeEEcCCCCeEEEEeCCCcccC-CCCccc
Q 042086 2 AGKEAYALLKWKTSLQKHNRSLLSSWTFYPVNNATNVSFYSKIKISPCAWFGIQCNPAKRVISINLSTVGLKG-NLKSLS 80 (784)
Q Consensus 2 ~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~~~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~-~l~~l~ 80 (784)
...++.||+++..+........-..|. ......+.|.++++.. .+++.+++...+... ....++
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~ 194 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPT--------------GDSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQ 194 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCc--------------CCCCccccCCCceecC-CccceEEeeCCCCCcchhhHhh
Confidence 456788999998887543333333442 2334567899888875 567777765544332 223355
Q ss_pred EEeCCCCcccc---------cCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcC
Q 042086 81 TLDLSKNKLNG---------SIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNL 151 (784)
Q Consensus 81 ~L~L~~n~i~~---------~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 151 (784)
.++|+.|.|.+ ..+..|..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.+++|
T Consensus 195 ~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 272 (727)
T 4b8c_D 195 HKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNL 272 (727)
T ss_dssp ---------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTC
T ss_pred cCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCC
Confidence 56666665554 23666777777777777777777 56666667777777777777777 677777777777
Q ss_pred cEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccc-cceeccCC
Q 042086 152 AVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKM-LLHLGLST 230 (784)
Q Consensus 152 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~ 230 (784)
++|+|++|.|+ .+|..|+++++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++
T Consensus 273 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~ 350 (727)
T 4b8c_D 273 RVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRD 350 (727)
T ss_dssp CEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhcc
Confidence 77777777777 56777777777777777777776 66667777777777777777777777777665432 23466777
Q ss_pred CccccccCC
Q 042086 231 NHLSGVIPL 239 (784)
Q Consensus 231 n~l~~~~~~ 239 (784)
|.+++.+|.
T Consensus 351 N~l~~~~p~ 359 (727)
T 4b8c_D 351 NRPEIPLPH 359 (727)
T ss_dssp CCCCCCCCC
T ss_pred CcccCcCcc
Confidence 777766654
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.3e-20 Score=194.65 Aligned_cols=171 Identities=27% Similarity=0.353 Sum_probs=82.8
Q ss_pred ccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceE
Q 042086 196 LSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYL 275 (784)
Q Consensus 196 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L 275 (784)
+++|+.|++++|.+... ..+..+++|++|++++|++++..+ +..+++|+.|++++|+++ .++ .+..+++|++|
T Consensus 45 l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~--~~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK--DLS-SLKDLKKLKSL 117 (291)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC--CGG-GGTTCTTCCEE
T ss_pred cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC--CCh-hhccCCCCCEE
Confidence 34444444444444322 124444444444444444443222 444444444444444443 122 24444555555
Q ss_pred eccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCcccc
Q 042086 276 VLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILE 355 (784)
Q Consensus 276 ~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 355 (784)
++++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555432 2344555555555555555533 345555555555555555555332 555555555555555555
Q ss_pred ccccccccccccccEEecCCCccCCC
Q 042086 356 GKIPCEICNMESLEKLNLSHNNFSGL 381 (784)
Q Consensus 356 ~~~~~~~~~l~~L~~L~L~~N~l~~~ 381 (784)
+ ++ .+..+++|+.|++++|+++..
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccCC
Confidence 3 22 255555666666666665543
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8.5e-20 Score=196.78 Aligned_cols=157 Identities=29% Similarity=0.208 Sum_probs=95.1
Q ss_pred cccEEeCCCCcccccCCCCcC-CCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEee
Q 042086 78 SLSTLDLSKNKLNGSIPFSFG-NLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHL 156 (784)
Q Consensus 78 ~l~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (784)
.++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 456666666666666666665 6666666666666666666666666666666666666666555556666666666666
Q ss_pred cCCCcccccCCccccccccceeeccccccCCCccccc---cCccCCceeeccccccCCccchhhhcccc--cceeccCCC
Q 042086 157 YGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISL---GNLSNLVVLHLFENSLFGSIPSILGNLKM--LLHLGLSTN 231 (784)
Q Consensus 157 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~l~~l~~--L~~L~L~~n 231 (784)
++|.|++..|..|.++++|++|+|++|.|++..+..| ..+++|+.|+|++|+|+...+..+..++. |+.|+|++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 6666666556666666666666666666664333333 34566666666666665555455555554 244555555
Q ss_pred ccc
Q 042086 232 HLS 234 (784)
Q Consensus 232 ~l~ 234 (784)
.+.
T Consensus 200 ~~~ 202 (361)
T 2xot_A 200 PLE 202 (361)
T ss_dssp CEE
T ss_pred Ccc
Confidence 544
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.7e-20 Score=195.58 Aligned_cols=188 Identities=27% Similarity=0.360 Sum_probs=103.9
Q ss_pred ccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecC
Q 042086 79 LSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYG 158 (784)
Q Consensus 79 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 158 (784)
+..+.+..+.+++.. .+..+++|++|++++|.++.. +.+..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344455555555332 234566666666666666533 236666666666666666664333 66666666666666
Q ss_pred CCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccC
Q 042086 159 NSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIP 238 (784)
Q Consensus 159 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 238 (784)
|.+++ ++ .+..+++|++|+|++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 66664 22 356666666666666666642 3455566666666666666543 345556666666666666654333
Q ss_pred CCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCcccc
Q 042086 239 LSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLY 283 (784)
Q Consensus 239 ~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~ 283 (784)
+..+++|+.|++++|+++ .++ .+..+++|+.|++++|+++
T Consensus 174 --l~~l~~L~~L~L~~N~i~--~l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHIS--DLR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp --GTTCTTCCEEECCSSCCC--BCG-GGTTCTTCSEEEEEEEEEE
T ss_pred --hcCCCccCEEECCCCcCC--CCh-hhccCCCCCEEECcCCccc
Confidence 445555555555555544 222 2444444444444444444
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=6.3e-20 Score=209.65 Aligned_cols=205 Identities=23% Similarity=0.279 Sum_probs=164.7
Q ss_pred cccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceE
Q 042086 171 NLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGL 250 (784)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 250 (784)
.+..+..+.++.+.+.+..+ +..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +..+++|+.|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 45667778888888875443 56788999999999998754 3 58889999999999999987655 8889999999
Q ss_pred EecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccc
Q 042086 251 YLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQF 330 (784)
Q Consensus 251 ~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l 330 (784)
+|++|+++ .++ .+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+
T Consensus 93 ~Ls~N~l~--~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l 165 (605)
T 1m9s_A 93 FLDENKIK--DLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 165 (605)
T ss_dssp ECCSSCCC--CCT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCC
T ss_pred ECcCCCCC--CCh-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcC
Confidence 99999887 344 688888999999999998853 4588889999999999998865 6788889999999999999
Q ss_pred cCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccc
Q 042086 331 RKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGL 392 (784)
Q Consensus 331 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 392 (784)
++..| +..+++|+.|+|++|++++. | .+..+++|+.|+|++|++.+.....+..+..+
T Consensus 166 ~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~ 223 (605)
T 1m9s_A 166 SDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSNLVVP 223 (605)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCCSSCEEE
T ss_pred CCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCcccccccEEec
Confidence 88655 88889999999999988853 3 68888899999999999887655555444333
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.8e-19 Score=178.19 Aligned_cols=133 Identities=22% Similarity=0.275 Sum_probs=72.4
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEee
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHL 156 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (784)
++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 34555555555555555555555555555555555555555555555555555555555555444444455555555555
Q ss_pred cCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeecccccc
Q 042086 157 YGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSL 209 (784)
Q Consensus 157 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 209 (784)
++|.|++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|++|.+
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 55555555455555555555555555555544444455555555555555544
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.6e-19 Score=179.66 Aligned_cols=156 Identities=23% Similarity=0.285 Sum_probs=135.3
Q ss_pred cceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecc
Q 042086 247 LIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLS 326 (784)
Q Consensus 247 L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls 326 (784)
.+.+++++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 21 ~~~v~c~~~~l~--~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHA--SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCS--SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcC--ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 345666666654 5554443 788999999999998888889999999999999999987666778899999999999
Q ss_pred cccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccC
Q 042086 327 NNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPI 406 (784)
Q Consensus 327 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 406 (784)
+|+|++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.|.+
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 99999877778899999999999999999 78889999999999999999999888888999999999999999999877
Q ss_pred C
Q 042086 407 P 407 (784)
Q Consensus 407 p 407 (784)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 6
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1.2e-21 Score=222.44 Aligned_cols=216 Identities=22% Similarity=0.168 Sum_probs=121.6
Q ss_pred CCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhccccccee
Q 042086 147 NLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHL 226 (784)
Q Consensus 147 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 226 (784)
.+++|+.|+|++|.++ .+|..++++++|++|++++|......|.. +..+.+.+..|..++++++|+.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~L 414 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKAV 414 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhcccC
Confidence 4555666666666665 45666666666666666544311011100 01111344556666666667666
Q ss_pred c-cCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCc
Q 042086 227 G-LSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNK 305 (784)
Q Consensus 227 ~-L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 305 (784)
+ ++.|.+. +|+.+.+++|.++ .++. ..|+.|+|++|.+++ +|. +..+++|+.|+|++|.
T Consensus 415 ~~l~~n~~~-----------~L~~l~l~~n~i~--~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 415 DPMRAAYLD-----------DLRSKFLLENSVL--KMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp CGGGHHHHH-----------HHHHHHHHHHHHH--HHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred cchhhcccc-----------hhhhhhhhccccc--ccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 6 5555432 2333444444443 1111 236666666666664 444 6666666666666666
Q ss_pred cCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccc-cccccccccccEEecCCCccCCCCcc
Q 042086 306 LGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKI-PCEICNMESLEKLNLSHNNFSGLIPS 384 (784)
Q Consensus 306 l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~ 384 (784)
|+ .+|..++++++|+.|+|++|+|++ +| .++.+++|+.|+|++|++++.. |..++.+++|+.|+|++|++++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 66 556666666666666666666666 44 5666666666666666666554 66666666777777777766665442
Q ss_pred c---ccCcccceEEEc
Q 042086 385 C---FEGMHGLSCIDV 397 (784)
Q Consensus 385 ~---~~~l~~L~~l~l 397 (784)
. +..+++|+.||+
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 223566666653
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.4e-19 Score=195.16 Aligned_cols=174 Identities=27% Similarity=0.260 Sum_probs=127.1
Q ss_pred EEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCC-CCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCC
Q 042086 81 TLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIG-NLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGN 159 (784)
Q Consensus 81 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (784)
.+++++++++. +|..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45666676663 565543 4588899999999888888787 8889999999999888777778888888888888888
Q ss_pred CcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhh---hcccccceeccCCCccccc
Q 042086 160 SLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSIL---GNLKMLLHLGLSTNHLSGV 236 (784)
Q Consensus 160 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l---~~l~~L~~L~L~~n~l~~~ 236 (784)
+|+...+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|+...+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 8887777778888888888888888887777788888888888888888876555555 4566777777777777644
Q ss_pred cCCCCcCCCC--cceEEecCCCC
Q 042086 237 IPLSIGNLNN--LIGLYLYDNQL 257 (784)
Q Consensus 237 ~~~~l~~l~~--L~~L~L~~n~l 257 (784)
.+..+..++. |+.|+|++|.+
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCE
T ss_pred CHHHhhhccHhhcceEEecCCCc
Confidence 4344444443 24444444443
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1.8e-21 Score=221.20 Aligned_cols=217 Identities=22% Similarity=0.142 Sum_probs=152.8
Q ss_pred CCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCce
Q 042086 122 GNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVV 201 (784)
Q Consensus 122 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 201 (784)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|......|. .+..+.+.+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 67899999999999998 8899999999999999977642111110 11122334456667777777777
Q ss_pred ee-ccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCc
Q 042086 202 LH-LFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGN 280 (784)
Q Consensus 202 L~-L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n 280 (784)
|+ ++.|.+ .+|+.+.+++|.++...+. .|+.|+|++|+++ .+|. +..+++|+.|+|++|
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~--~lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLT--VLCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCS--SCCC-GGGGTTCCEEECCSS
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCC--CCcC-ccccccCcEeecCcc
Confidence 77 555543 3455566666666643322 3677777777776 4564 777777888888888
Q ss_pred cccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCC-chhhhcccccCeeccCCcccccccc
Q 042086 281 QLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGF-PVELEKLIQLSELDLSLNILEGKIP 359 (784)
Q Consensus 281 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~ 359 (784)
+++ .+|..++.+++|+.|+|++|.|++ +| .++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++..|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 777 667777788888888888888875 55 7777888888888888888765 7788888888888888888876544
Q ss_pred cc---ccccccccEEec
Q 042086 360 CE---ICNMESLEKLNL 373 (784)
Q Consensus 360 ~~---~~~l~~L~~L~L 373 (784)
.. +..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 22 234677887764
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=177.48 Aligned_cols=131 Identities=21% Similarity=0.214 Sum_probs=59.6
Q ss_pred ccEEeCCCCcccccCC-CCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeec
Q 042086 79 LSTLDLSKNKLNGSIP-FSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLY 157 (784)
Q Consensus 79 l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 157 (784)
+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|+.+++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3444444444444432 224444444444444444444444444444444444444444444444444444444444444
Q ss_pred CCCcccccCCccccccccceeeccccccCCCccccccCccCCceeecccccc
Q 042086 158 GNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSL 209 (784)
Q Consensus 158 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 209 (784)
+|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 4444444444444444444444444444444344444444444444444444
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.6e-19 Score=211.61 Aligned_cols=184 Identities=25% Similarity=0.261 Sum_probs=74.1
Q ss_pred CccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccc
Q 042086 188 SIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIG 267 (784)
Q Consensus 188 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~ 267 (784)
..+..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|.. +.
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~-------------------------~~ 267 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAE-------------------------IK 267 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGG-------------------------GG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChh-------------------------hh
Confidence 34445555555555555555554 33333445555555555555555 44444 44
Q ss_pred cccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccc-cCe
Q 042086 268 KLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQ-LSE 346 (784)
Q Consensus 268 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~ 346 (784)
.+++|++|+|++|.|+ .+|..|..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+|++.+|..+..+.. +..
T Consensus 268 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~ 345 (727)
T 4b8c_D 268 NLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLI 345 (727)
T ss_dssp GGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhH
Confidence 4445555555555554 34555555555555555555554 44444555555555555555555555554443321 223
Q ss_pred eccCCccccccccccccccccccEEecCCC--------ccCCCCcccccCcccceEEEcCCCCCcccC
Q 042086 347 LDLSLNILEGKIPCEICNMESLEKLNLSHN--------NFSGLIPSCFEGMHGLSCIDVSYNELRGPI 406 (784)
Q Consensus 347 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 406 (784)
|+|++|.+++.+|.. |+.|++++| .+.+..+..+..+..+....+++|-+.+..
T Consensus 346 l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 346 FYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHY 407 (727)
T ss_dssp HHHHHCCCCCCCCCC-----------------------------------------------CCCGGG
T ss_pred HhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeecccccccc
Confidence 556666666555532 344445544 444444555556666777777888766433
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=3.8e-19 Score=182.40 Aligned_cols=80 Identities=31% Similarity=0.376 Sum_probs=37.0
Q ss_pred cccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeecc
Q 042086 270 SSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDL 349 (784)
Q Consensus 270 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 349 (784)
++|+.|++++|++++. ..+..+++|+.|++++|++++. + .+..+++|+.|++++|++++. ..+..+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l 179 (263)
T 1xeu_A 106 ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDL 179 (263)
T ss_dssp SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEE
T ss_pred CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeC
Confidence 4444444444444432 1344444555555555554432 1 344444555555555555443 33444444444455
Q ss_pred CCcccc
Q 042086 350 SLNILE 355 (784)
Q Consensus 350 s~N~l~ 355 (784)
++|.+.
T Consensus 180 ~~N~~~ 185 (263)
T 1xeu_A 180 TGQKCV 185 (263)
T ss_dssp EEEEEE
T ss_pred CCCccc
Confidence 444444
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=4.3e-19 Score=182.00 Aligned_cols=169 Identities=26% Similarity=0.337 Sum_probs=84.4
Q ss_pred CCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceee
Q 042086 124 LKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLH 203 (784)
Q Consensus 124 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 203 (784)
+.++..+++++|.+++.. .+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344445555555555321 34455555555555555552 23 44555555555555555553322 44555555555
Q ss_pred ccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCcccc
Q 042086 204 LFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLY 283 (784)
Q Consensus 204 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~ 283 (784)
|++|++++. +. +.. ++|+.|+|++|+++ .++ .+..+++|+.|++++|+++
T Consensus 92 L~~N~l~~l-------------------------~~-~~~-~~L~~L~L~~N~l~--~~~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 92 VNRNRLKNL-------------------------NG-IPS-ACLSRLFLDNNELR--DTD-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CCSSCCSCC-------------------------TT-CCC-SSCCEEECCSSCCS--BSG-GGTTCTTCCEEECTTSCCC
T ss_pred CCCCccCCc-------------------------Cc-ccc-CcccEEEccCCccC--CCh-hhcCcccccEEECCCCcCC
Confidence 555555432 11 111 44555555555444 222 3455555555555555555
Q ss_pred CCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccC
Q 042086 284 GNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRK 332 (784)
Q Consensus 284 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~ 332 (784)
+. + .+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 32 2 455555566666666655543 445555666666666666554
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.1e-18 Score=170.97 Aligned_cols=153 Identities=19% Similarity=0.260 Sum_probs=113.9
Q ss_pred CCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccce
Q 042086 98 GNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFY 177 (784)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 177 (784)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|+|++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55677777777777777 444 5777778888888888665 2346777888888888888888777777888888888
Q ss_pred eeccccccCCCccccccCccCCceeeccccc-cCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCC
Q 042086 178 LHLSSNQLSGSIPISLGNLSNLVVLHLFENS-LFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQ 256 (784)
Q Consensus 178 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 256 (784)
|+|++|.+++..|..++.+++|++|+|++|. ++ .++ .+.++++|+.|++++|++++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 8888888887677778888888888888887 54 444 577888888888888888753 3 67788888888888887
Q ss_pred CC
Q 042086 257 LS 258 (784)
Q Consensus 257 l~ 258 (784)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 65
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.9e-18 Score=167.82 Aligned_cols=153 Identities=17% Similarity=0.202 Sum_probs=102.6
Q ss_pred CCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCce
Q 042086 122 GNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVV 201 (784)
Q Consensus 122 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 201 (784)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45667777777777776 444 56777777777777775542 235666777777777777777666667777777777
Q ss_pred eeccccccCCccchhhhcccccceeccCCCc-cccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCc
Q 042086 202 LHLFENSLFGSIPSILGNLKMLLHLGLSTNH-LSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGN 280 (784)
Q Consensus 202 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n 280 (784)
|+|++|++++..+..++.+++|++|++++|+ ++. ++ .+..+++|+.|++++|+++ .++ .+..+++|+.|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~--~~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVH--DYR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCC--CCT-TGGGCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCc--ChH-HhccCCCCCEEEeeCc
Confidence 7777777776666677777777777777776 543 33 4667777777777777766 333 5666777777777777
Q ss_pred ccc
Q 042086 281 QLY 283 (784)
Q Consensus 281 ~l~ 283 (784)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 765
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=2.4e-18 Score=175.88 Aligned_cols=140 Identities=17% Similarity=0.174 Sum_probs=107.8
Q ss_pred CCCCceeEecccceEEEEEEE-cCCCE--EEEEEcCCCCCCCCC---------------------ChhhHHHHHHHHhcc
Q 042086 516 GFDVKYCIGIGGQGSVYKAKL-TSGEI--LAVKKFHSLWPCEMV---------------------PQPEFVNEIKTLTEL 571 (784)
Q Consensus 516 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~---------------------~~~~~~~E~~~l~~l 571 (784)
-|++.+.||+|+||.||+|.. .+|+. ||||+++.....-.. ....+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999998 68989 999987543211000 013688999999999
Q ss_pred CCCce--eeEEeEEecCCceEEEEecccC-C----CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEE
Q 042086 572 RHRSI--VKFYGFCSHPRNSFLVYEYLER-G----SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMH-HDCFPPIVH 643 (784)
Q Consensus 572 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH 643 (784)
.|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88764 344432 357899999942 4 77776532 123456789999999999999 88 9999
Q ss_pred eCCCCCCeeecCCCceEEecccccccc
Q 042086 644 RDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 644 ~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999764
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1.1e-18 Score=169.92 Aligned_cols=156 Identities=24% Similarity=0.332 Sum_probs=100.1
Q ss_pred ceEeccCccccCCCCccccCCCccceeecccCccCCCCcc-cccccccceEEecccccccCCCchhhhcccccCeeccCC
Q 042086 273 NYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPE-TLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSL 351 (784)
Q Consensus 273 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~-~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 351 (784)
+.|++++|.++ .+|..+.. +|++|++++|.+++..+. .+..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 55666666664 44544432 666777777777654443 366677777777777777776667777777777777777
Q ss_pred ccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCCCCCCcCCCcccccCCCCCCCCCC
Q 042086 352 NILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPNSRIFQYDPMEALQGNKGLCGDIK 431 (784)
Q Consensus 352 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 431 (784)
|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|.|.++..+.........+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 77776666667777777777777777777777777777777777777777777666432221111122334455566553
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=3.4e-19 Score=189.60 Aligned_cols=260 Identities=14% Similarity=0.085 Sum_probs=153.8
Q ss_pred CCCCCEEEccCCccC--CCCCcCccCCCcCcEEeecCCCcccccCCcccc--------ccccceeeccccccCCCccccc
Q 042086 124 LKFLYHLDLSENQLS--GSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGN--------LKSLFYLHLSSNQLSGSIPISL 193 (784)
Q Consensus 124 l~~L~~L~L~~n~l~--~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~--------l~~L~~L~L~~n~l~~~~~~~~ 193 (784)
+++|+.|||++|++. ...+. .++.++.+.+..|.| .+.+|.+ +++|++|+|.+ .++...+..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 555666666666555 11111 122234444444422 2244444 66666666666 5554445556
Q ss_pred cCccCCceeeccccccCCccchhhhcccccceeccCCCcc----ccccCCCCcCCCCcc-eEEecCCCCCCCCccccc--
Q 042086 194 GNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL----SGVIPLSIGNLNNLI-GLYLYDNQLSVGEIPIEI-- 266 (784)
Q Consensus 194 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l----~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~l-- 266 (784)
.++++|+.|++++|.+..+.+.+|.++.++..+.+..+.. ......+|.++..|+ .+.+.... .++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~----~l~~~~~~ 196 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG----KLEDEIMK 196 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC----CHHHHHHH
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC----cHHHHHhh
Confidence 6666666666666666655566666665565555544221 222334455555555 44443221 122111
Q ss_pred --ccccccceEeccCccccCCCCccc-cCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccc
Q 042086 267 --GKLSSLNYLVLNGNQLYGNLPRAL-GSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQ 343 (784)
Q Consensus 267 --~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 343 (784)
....++..+.+.++-.. .....+ ..+++|+.|+|++|+++...+..|.++++|+.|+|++| ++.+.+.+|.++++
T Consensus 197 ~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~ 274 (329)
T 3sb4_A 197 AGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGR 274 (329)
T ss_dssp TTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred cccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChh
Confidence 12345555555544221 111111 13677888888888777666667788888888888877 77767777888888
Q ss_pred cC-eeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEc
Q 042086 344 LS-ELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDV 397 (784)
Q Consensus 344 L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l 397 (784)
|+ .|++.+ .++...+.+|.++++|+.|++++|+++...+..|.++++|+.++.
T Consensus 275 L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 275 LAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88 888887 666566678888888888888888888887788888888887753
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=5.2e-17 Score=158.04 Aligned_cols=129 Identities=27% Similarity=0.331 Sum_probs=85.8
Q ss_pred EeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCC-CCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCC
Q 042086 82 LDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPP-VIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNS 160 (784)
Q Consensus 82 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 160 (784)
|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|++++..|..|..+++|++|+|++|+
T Consensus 13 l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 13 VDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 444455553 34444432 667777777777655554 36677777777777777776666777777777777777777
Q ss_pred cccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCcc
Q 042086 161 LSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSI 213 (784)
Q Consensus 161 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 213 (784)
|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.+..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 77666666777777777777777777666777777777777777777776543
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2e-17 Score=160.90 Aligned_cols=132 Identities=25% Similarity=0.297 Sum_probs=112.0
Q ss_pred ceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCc
Q 042086 273 NYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLN 352 (784)
Q Consensus 273 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 352 (784)
+.+++++|.++ .+|..+. ++|++|+|++|.++ .+|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56777788777 4565443 57888888888887 66788888889999999999998887888889999999999999
Q ss_pred cccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 353 ILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 353 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|.+.-
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99988888899999999999999999988888899999999999999999987764
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=9.3e-17 Score=152.74 Aligned_cols=132 Identities=23% Similarity=0.186 Sum_probs=69.4
Q ss_pred CCCCEEEccCCccc-ccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceee
Q 042086 101 TNLAIMYLYRNSLS-ASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLH 179 (784)
Q Consensus 101 ~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 179 (784)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44444444444444 34444445555555555555555433 4455555555555555555544444444455555555
Q ss_pred ccccccCCCc-cccccCccCCceeeccccccCCccc---hhhhcccccceeccCCCccc
Q 042086 180 LSSNQLSGSI-PISLGNLSNLVVLHLFENSLFGSIP---SILGNLKMLLHLGLSTNHLS 234 (784)
Q Consensus 180 L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~L~~n~l~ 234 (784)
|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555555321 1455555566666666665554433 35556666666666666655
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=6.7e-17 Score=153.73 Aligned_cols=135 Identities=24% Similarity=0.239 Sum_probs=122.4
Q ss_pred CCCcccEEeCCCCccc-ccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcE
Q 042086 75 NLKSLSTLDLSKNKLN-GSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAV 153 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 153 (784)
.+++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 88899999999999999999999976 88999999999999999999888888888999999
Q ss_pred EeecCCCccccc-CCccccccccceeeccccccCCCcc---ccccCccCCceeeccccccCC
Q 042086 154 LHLYGNSLSGSI-PSIIGNLKSLFYLHLSSNQLSGSIP---ISLGNLSNLVVLHLFENSLFG 211 (784)
Q Consensus 154 L~L~~n~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~n~l~~ 211 (784)
|+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 999999999643 2788999999999999999996555 488999999999999999863
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.2e-16 Score=151.58 Aligned_cols=113 Identities=26% Similarity=0.239 Sum_probs=59.5
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeec
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHL 180 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 180 (784)
++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34455555555554444444455555555555555555444444455555555555555555444444555555555555
Q ss_pred cccccCCCccccccCccCCceeeccccccCCcc
Q 042086 181 SSNQLSGSIPISLGNLSNLVVLHLFENSLFGSI 213 (784)
Q Consensus 181 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 213 (784)
++|.+++..+..+..+++|++|+|++|.+.+..
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 555555444444455556666666666555443
No 382
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.1e-16 Score=170.24 Aligned_cols=259 Identities=14% Similarity=0.102 Sum_probs=149.7
Q ss_pred CCCcccEEeCCCCccc--ccCCCCcCCCCCCCEEEccCCcccccCCCCCCC--------CCCCCEEEccCCccCCCCCcC
Q 042086 75 NLKSLSTLDLSKNKLN--GSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGN--------LKFLYHLDLSENQLSGSIPPT 144 (784)
Q Consensus 75 ~l~~l~~L~L~~n~i~--~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~--------l~~L~~L~L~~n~l~~~~p~~ 144 (784)
.+++|++|||++|+|. ...+..+ +.+..+.+..|.| .+.+|.+ |++|++|+|.+ .++...+.+
T Consensus 47 ~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~a 119 (329)
T 3sb4_A 47 EFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAA 119 (329)
T ss_dssp SCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTT
T ss_pred hhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHH
Confidence 3788999999999998 3333223 2245566666643 2356666 88888888888 777666778
Q ss_pred ccCCCcCcEEeecCCCcccccCCccccccccceeecccccc----CCCccccccCccCCc-eeeccccccCCccchhhh-
Q 042086 145 LGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQL----SGSIPISLGNLSNLV-VLHLFENSLFGSIPSILG- 218 (784)
Q Consensus 145 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l----~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~l~- 218 (784)
|.++++|+.|+++.|.+....+.+|.++.++..+.+..+.. .......|.++.+|+ .+.+.... .++..+.
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~ 196 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMK 196 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHH
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhh
Confidence 88888888888888888877778888887777777766332 222233455555555 33332211 1111111
Q ss_pred ---cccccceeccCCCccccccCCCC-cCCCCcceEEecCCCCCCCCccc-ccccccccceEeccCccccCCCCccccCC
Q 042086 219 ---NLKMLLHLGLSTNHLSGVIPLSI-GNLNNLIGLYLYDNQLSVGEIPI-EIGKLSSLNYLVLNGNQLYGNLPRALGSL 293 (784)
Q Consensus 219 ---~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l 293 (784)
...+++.+.+.++-.. .....+ ..+++|+.|+|++|+++ .++. .|..+++|+.|++.+| ++...+.+|.++
T Consensus 197 ~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~--~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~ 272 (329)
T 3sb4_A 197 AGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNAT--TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNC 272 (329)
T ss_dssp TTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCC--EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred cccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcc--eecHhhhhCCCCCCEEECCcc-cceehHHHhhCC
Confidence 1233333433332111 100111 12445555555555544 3322 3555555666666555 444455566666
Q ss_pred Cccc-eeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeec
Q 042086 294 TELE-YLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELD 348 (784)
Q Consensus 294 ~~L~-~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 348 (784)
++|+ .+++.+ .++...+..|.++++|+.|++++|.++.+.+.+|.++++|+.|+
T Consensus 273 ~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 273 GRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred hhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 6666 666665 55545556666666666666666666666666666666666654
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=7.1e-17 Score=150.18 Aligned_cols=128 Identities=23% Similarity=0.262 Sum_probs=65.9
Q ss_pred CcccEEeCCCCccc-ccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEe
Q 042086 77 KSLSTLDLSKNKLN-GSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLH 155 (784)
Q Consensus 77 ~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 155 (784)
++|++|++++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45556666666655 45555555555555555555555543 4455555555555555555544444444444555555
Q ss_pred ecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccc---hhhhcccccceeccC
Q 042086 156 LYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIP---SILGNLKMLLHLGLS 229 (784)
Q Consensus 156 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~L~ 229 (784)
+++|.+++.. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~-----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLS-----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHH-----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChH-----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 5555444321 22444555555555555555544433 345555666666554
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.1e-16 Score=148.83 Aligned_cols=129 Identities=22% Similarity=0.204 Sum_probs=104.5
Q ss_pred CCCCCEEEccCCccC-CCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCcee
Q 042086 124 LKFLYHLDLSENQLS-GSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVL 202 (784)
Q Consensus 124 l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 202 (784)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 56677777777777777777777754 667788888888888888887678777788999999
Q ss_pred eccccccCCc-cchhhhcccccceeccCCCccccccC---CCCcCCCCcceEEecC
Q 042086 203 HLFENSLFGS-IPSILGNLKMLLHLGLSTNHLSGVIP---LSIGNLNNLIGLYLYD 254 (784)
Q Consensus 203 ~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~L~~ 254 (784)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999864 34789999999999999999997665 5788999999998864
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=2.4e-15 Score=163.30 Aligned_cols=240 Identities=13% Similarity=0.055 Sum_probs=123.2
Q ss_pred CCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeec
Q 042086 101 TNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHL 180 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 180 (784)
..++.+.+.+ .++.+-..+|.++ +|+.++|.++ ++.....+|.+ .+|+.+.|.. .++...+.+|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4555555544 3444445556554 5666666554 44444455555 3566666664 455455566666666666666
Q ss_pred cccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCC
Q 042086 181 SSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVG 260 (784)
Q Consensus 181 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 260 (784)
++|.++......|. +.+|+.+.|..+ +..+...+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+..+ ++
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~-- 260 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VT-- 260 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CC--
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-cc--
Confidence 66666643333444 466666666633 55555666677777777777654 44445555655 56666666322 22
Q ss_pred Cc-ccccccccccceEeccCcccc-----CCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCC
Q 042086 261 EI-PIEIGKLSSLNYLVLNGNQLY-----GNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGF 334 (784)
Q Consensus 261 ~~-~~~l~~l~~L~~L~l~~n~l~-----~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~ 334 (784)
.+ ...|..+++|+.+.+.+|.+. ...+.+|..+++|+.++|. +.++......|.++++|+.+.|..| ++.+.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 22 223445555555555554443 2333445555555555554 2244333344444444444444332 33333
Q ss_pred chhhhcccccCeeccCCcccc
Q 042086 335 PVELEKLIQLSELDLSLNILE 355 (784)
Q Consensus 335 ~~~~~~l~~L~~L~Ls~N~l~ 355 (784)
..+|.++ +|+.|++++|.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCC
T ss_pred HHhCCCC-CCCEEEEcCCCCc
Confidence 3334443 4444444444333
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=6.4e-16 Score=148.27 Aligned_cols=135 Identities=24% Similarity=0.245 Sum_probs=103.0
Q ss_pred ccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccC
Q 042086 271 SLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLS 350 (784)
Q Consensus 271 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 350 (784)
+.+.+++++|.++ .+|..+ .++|+.|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|+|+
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 3456677777766 344333 2577788888888776666667777888888888888877666667888888888888
Q ss_pred CccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCCC
Q 042086 351 LNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIPN 408 (784)
Q Consensus 351 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 408 (784)
+|++++..+..+..+++|+.|+|++|++++..+..+..+++|++|++++|++.|.+|.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 8888866666678888888888888888877777778888889999999988887763
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=5e-15 Score=160.80 Aligned_cols=264 Identities=15% Similarity=0.065 Sum_probs=192.1
Q ss_pred CCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCcee
Q 042086 123 NLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVL 202 (784)
Q Consensus 123 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 202 (784)
.+..++.+.+.+ .++.....+|.+. +|+.+.|..+ ++.+...+|.+. +|+.+.+.+ .++...+..|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 346777888765 4554556677774 7888888776 666667778774 688888886 6665666788888999999
Q ss_pred eccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCccc-ccccccccceEeccCcc
Q 042086 203 HLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPI-EIGKLSSLNYLVLNGNQ 281 (784)
Q Consensus 203 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~-~l~~l~~L~~L~l~~n~ 281 (784)
+|.+|+++.+....|. ..+|+.+.|.++ ++.+...+|.++++|+.+.+..| ++ .++. .|.+ .+|+.+.+. +.
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~--~I~~~aF~~-~~L~~i~lp-~~ 258 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS--TIGQEAFRE-SGITTVKLP-NG 258 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC--EECTTTTTT-CCCSEEEEE-TT
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc--Ccccccccc-CCccEEEeC-CC
Confidence 9988888877777777 578888888754 76677778888888888888775 32 3333 3444 688888884 45
Q ss_pred ccCCCCccccCCCccceeecccCccC-----CCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccc
Q 042086 282 LYGNLPRALGSLTELEYLDLSTNKLG-----NSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEG 356 (784)
Q Consensus 282 l~~~~~~~l~~l~~L~~L~Ls~n~l~-----~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 356 (784)
++.....+|..+++|+.+++.+|.+. ...+..|.++++|+.++|. +.++.+...+|.++++|+.++|..| ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 66566778888888888888887765 3445667788888888887 4477666777888888888888554 665
Q ss_pred cccccccccccccEEecCCCccCCCCcccccCcc-cceEEEcCCCC
Q 042086 357 KIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMH-GLSCIDVSYNE 401 (784)
Q Consensus 357 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~l~~N~ 401 (784)
..+.+|.++ +|+.|++++|.+....+..|..++ .++.|++..|.
T Consensus 337 I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 337 INFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp ECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred EcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 556677777 788888888877776667676663 56667666554
No 388
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=147.98 Aligned_cols=127 Identities=28% Similarity=0.362 Sum_probs=83.6
Q ss_pred cEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCC
Q 042086 80 STLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGN 159 (784)
Q Consensus 80 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (784)
+.+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46778887777 3454432 46777777777776 55566667777777777777777666666666777777777777
Q ss_pred CcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccC
Q 042086 160 SLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLF 210 (784)
Q Consensus 160 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 210 (784)
+|++..+..|.++++|++|+|++|.++...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 766666666666666666666666666544445666666666666666654
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=1.1e-16 Score=169.50 Aligned_cols=144 Identities=10% Similarity=0.107 Sum_probs=101.4
Q ss_pred HhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCC--CC---------CChhh--------HHHHHHHHhccCC
Q 042086 513 ATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPC--EM---------VPQPE--------FVNEIKTLTELRH 573 (784)
Q Consensus 513 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~---------~~~~~--------~~~E~~~l~~l~h 573 (784)
...-|++.+.||+|++|.||+|...+|+.||||+++..... .. ..... ..+|...+.++.+
T Consensus 93 rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~ 172 (397)
T 4gyi_A 93 RKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE 172 (397)
T ss_dssp TTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 33458999999999999999999999999999987643111 00 00111 1245555555544
Q ss_pred CceeeEEeEEecCCceEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeee
Q 042086 574 RSIVKFYGFCSHPRNSFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLL 653 (784)
Q Consensus 574 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 653 (784)
.++....-+.. ...++||||+++++|.++... .....++.|++.++.|||+. |||||||||.|||+
T Consensus 173 ~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl 238 (397)
T 4gyi_A 173 EGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILI 238 (397)
T ss_dssp TTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred cCCCCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEE
Confidence 43322111111 234799999999888664321 12346789999999999998 99999999999999
Q ss_pred cCCC----------ceEEecccccccc
Q 042086 654 CLDY----------EARVSDFGIAKFL 670 (784)
Q Consensus 654 ~~~~----------~~kl~DfG~a~~~ 670 (784)
++++ .+.|+||+-+...
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred eCCCCcccccccccceEEEEeCCcccC
Confidence 8876 3899999987653
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.58 E-value=1.2e-13 Score=150.57 Aligned_cols=311 Identities=12% Similarity=0.033 Sum_probs=214.9
Q ss_pred ccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcC
Q 042086 72 LKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNL 151 (784)
Q Consensus 72 ~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 151 (784)
.+.++.+|+.+.|.. +++.....+|.++++|+.++|.++ ++.+-..+|.++++|+.+.+..+ +......+|.+...+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 445677788888864 477666778888888888888754 55555677888888888777654 333445566665544
Q ss_pred cEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCC
Q 042086 152 AVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTN 231 (784)
Q Consensus 152 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 231 (784)
........ ......+|.++++|+.+.+.++... .....|.++.+|+.+.+..+ +..+....|.++..|+.+.+.++
T Consensus 143 ~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 143 EITIPEGV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp EEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccCccc--cccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 43333322 2234567888888888888765433 45567888888888888766 55566677888888888887766
Q ss_pred ccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCc
Q 042086 232 HLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIP 311 (784)
Q Consensus 232 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 311 (784)
... +...+....+|+.+.+..+.-. --...+..+..|+.+.+..+... .....|..+..++.+....+.+. .
T Consensus 219 ~~~--i~~~~~~~~~l~~i~ip~~~~~--i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~ 290 (394)
T 4fs7_A 219 LYY--LGDFALSKTGVKNIIIPDSFTE--LGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---E 290 (394)
T ss_dssp CCE--ECTTTTTTCCCCEEEECTTCCE--ECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---T
T ss_pred ceE--eehhhcccCCCceEEECCCcee--cccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---c
Confidence 543 2333444567888877654321 11234667788888888776554 55667888888888877766543 2
Q ss_pred ccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCccc
Q 042086 312 ETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHG 391 (784)
Q Consensus 312 ~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 391 (784)
..|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+++..| ++.....+|.++.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 45777788888888765 66666778888888999888754 66555678888889999988776 66666788888888
Q ss_pred ceEEEcCCC
Q 042086 392 LSCIDVSYN 400 (784)
Q Consensus 392 L~~l~l~~N 400 (784)
|+.+++..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 888888644
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2.7e-15 Score=143.70 Aligned_cols=132 Identities=18% Similarity=0.203 Sum_probs=77.6
Q ss_pred cCCCCCCCEEEccCCcccccCCCCCCCCC-CCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCcccccccc
Q 042086 97 FGNLTNLAIMYLYRNSLSASIPPVIGNLK-FLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSL 175 (784)
Q Consensus 97 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 175 (784)
+.++.+|++|+|++|+++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455556666666666553 233 33333 666666666666643 456666666666666666664433444666666
Q ss_pred ceeeccccccCCCccc--cccCccCCceeeccccccCCccch----hhhcccccceeccCCCccc
Q 042086 176 FYLHLSSNQLSGSIPI--SLGNLSNLVVLHLFENSLFGSIPS----ILGNLKMLLHLGLSTNHLS 234 (784)
Q Consensus 176 ~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~----~l~~l~~L~~L~L~~n~l~ 234 (784)
++|+|++|.++ .+|. .+..+++|+.|++++|.++.. |. .+..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 66666666665 3443 566666666666666666533 33 3666677777777766654
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=3.1e-17 Score=160.65 Aligned_cols=132 Identities=28% Similarity=0.314 Sum_probs=66.9
Q ss_pred CCCCEEEccCCcccccCCC------CCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccc
Q 042086 101 TNLAIMYLYRNSLSASIPP------VIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKS 174 (784)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~------~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 174 (784)
..++.++++.+.+++.+|. .++.+++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3344444444444444433 45555555555555555553 33 5555555555555555555 34444445555
Q ss_pred cceeeccccccCCCccccccCccCCceeeccccccCCccc-hhhhcccccceeccCCCcccccc
Q 042086 175 LFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIP-SILGNLKMLLHLGLSTNHLSGVI 237 (784)
Q Consensus 175 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~ 237 (784)
|++|+|++|++++ +| .+..+++|++|++++|+++...+ ..+..+++|++|++++|++++..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 5555555555553 23 34555555555555555543222 34555555555555555555443
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.2e-16 Score=156.35 Aligned_cols=161 Identities=21% Similarity=0.246 Sum_probs=90.0
Q ss_pred hhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCcc
Q 042086 217 LGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTEL 296 (784)
Q Consensus 217 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 296 (784)
+.....++.++++.+.+++..|. + ..+|..+..+++|++|++++|.+++ +| .+..+++|
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~-----------------l--~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L 72 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP-----------------I--EKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENL 72 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT-----------------C--CCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTC
T ss_pred HHhcccccCcchheeEeccccCc-----------------H--hhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCC
Confidence 44555666777777777665443 0 1233345555555555555555553 34 55555566
Q ss_pred ceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCcccccccc-ccccccccccEEecCC
Q 042086 297 EYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIP-CEICNMESLEKLNLSH 375 (784)
Q Consensus 297 ~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~ 375 (784)
++|++++|.++ .+|..+..+++|++|++++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 73 ~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~ 149 (198)
T 1ds9_A 73 RILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAG 149 (198)
T ss_dssp CEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECS
T ss_pred CEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecC
Confidence 66666666555 345555555566666666666655 23 45566666666666666653222 3455666666666666
Q ss_pred CccCCCCccc----------ccCcccceEEEcCCCCCc
Q 042086 376 NNFSGLIPSC----------FEGMHGLSCIDVSYNELR 403 (784)
Q Consensus 376 N~l~~~~p~~----------~~~l~~L~~l~l~~N~l~ 403 (784)
|++++.+|.. +..+++|+.|| +|+++
T Consensus 150 N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 150 NPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp CHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 6665554442 55566666665 44443
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=5.7e-15 Score=141.43 Aligned_cols=131 Identities=21% Similarity=0.166 Sum_probs=113.3
Q ss_pred CCCCcccEEeCCCCcccccCCCCcCCCC-CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCc
Q 042086 74 GNLKSLSTLDLSKNKLNGSIPFSFGNLT-NLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLA 152 (784)
Q Consensus 74 ~~l~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 152 (784)
.++.+|++|+|++|+|+.. |. +..+. +|++|+|++|.|++. +.|+.+++|++|+|++|++++..+..+..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3567899999999999954 54 55554 999999999999976 7899999999999999999966555569999999
Q ss_pred EEeecCCCcccccCC--ccccccccceeeccccccCCCcccc----ccCccCCceeeccccccC
Q 042086 153 VLHLYGNSLSGSIPS--IIGNLKSLFYLHLSSNQLSGSIPIS----LGNLSNLVVLHLFENSLF 210 (784)
Q Consensus 153 ~L~L~~n~l~~~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~----~~~l~~L~~L~L~~n~l~ 210 (784)
+|+|++|.++ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999997 4565 7899999999999999998 55664 889999999999999875
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=4.3e-14 Score=134.30 Aligned_cols=108 Identities=25% Similarity=0.294 Sum_probs=67.4
Q ss_pred ceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCC
Q 042086 297 EYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHN 376 (784)
Q Consensus 297 ~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 376 (784)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44555555554 2343332 45556666666666555555666666666666666666555555666677777777777
Q ss_pred ccCCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 377 NFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 377 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
+|++..+..|..+++|+.|+|++|+|.|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776666667777777777777777776655
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2.7e-13 Score=128.78 Aligned_cols=103 Identities=32% Similarity=0.412 Sum_probs=63.6
Q ss_pred EEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCC
Q 042086 81 TLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNS 160 (784)
Q Consensus 81 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 160 (784)
+|++++|+++. +|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45566666663 444442 566666666666666666666666666666666666665555555666666666666666
Q ss_pred cccccCCccccccccceeeccccccC
Q 042086 161 LSGSIPSIIGNLKSLFYLHLSSNQLS 186 (784)
Q Consensus 161 l~~~~~~~l~~l~~L~~L~L~~n~l~ 186 (784)
|++..+..|.++++|++|+|++|.+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 66554555666666666666666655
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.46 E-value=2.6e-12 Score=139.93 Aligned_cols=316 Identities=11% Similarity=0.040 Sum_probs=234.3
Q ss_pred CeEEEEeCCC------cccCCCCcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccC
Q 042086 61 RVISINLSTV------GLKGNLKSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134 (784)
Q Consensus 61 ~v~~l~l~~~------~~~~~l~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 134 (784)
.++.++++.. ..+.++++|+.++|..+ ++.....+|.++.+|+.+.+..+ +......+|.++..+.......
T Consensus 72 ~L~~i~lp~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~ 149 (394)
T 4fs7_A 72 KVTEIKIPSTVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEG 149 (394)
T ss_dssp TEEEEECCTTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTT
T ss_pred CceEEEeCCCccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccCcc
Confidence 4666666532 23457889999999865 66677788999999999888765 5556667888886555444433
Q ss_pred CccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccc
Q 042086 135 NQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIP 214 (784)
Q Consensus 135 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 214 (784)
... ....+|.++++|+.+.+..+. ......+|.++.+|+.+++..| ++......|.++..|+.+.+..+... +.
T Consensus 150 ~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~ 223 (394)
T 4fs7_A 150 VTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LG 223 (394)
T ss_dssp CCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--EC
T ss_pred ccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--ee
Confidence 322 345688999999999998764 4366678999999999999877 55455677889999999988776542 23
Q ss_pred hhhhcccccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCC
Q 042086 215 SILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLT 294 (784)
Q Consensus 215 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 294 (784)
.......+|+.+.+..+ ++......|.++.+|+.+.+..+... -....+..+..++.+....+.+. ...|..+.
T Consensus 224 ~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~ 297 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCS 297 (394)
T ss_dssp TTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCT
T ss_pred hhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce--eeccccccccccceeccCceeec---cccccccc
Confidence 34445578888888654 34456678889999999999887654 22345778888888888776543 35788889
Q ss_pred ccceeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecC
Q 042086 295 ELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLS 374 (784)
Q Consensus 295 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 374 (784)
+|+.+.+..+ ++......|.++.+|+.++|.++ ++.+...+|.++.+|+.++|..| ++.....+|.++.+|+.+++.
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 9999999765 66566678889999999999754 77767788999999999999877 775667789999999999997
Q ss_pred CCccCCCCcccccCcccceEE
Q 042086 375 HNNFSGLIPSCFEGMHGLSCI 395 (784)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~l 395 (784)
.+ +. .+...|.+.++|+.+
T Consensus 375 ~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 375 KR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp GG-GG-GGGGGBCTTCEEEEE
T ss_pred CC-CE-EhhheecCCCCCcEE
Confidence 65 22 234567777777764
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.4e-13 Score=131.27 Aligned_cols=107 Identities=21% Similarity=0.285 Sum_probs=57.3
Q ss_pred eeecccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCc
Q 042086 298 YLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNN 377 (784)
Q Consensus 298 ~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 377 (784)
.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4444444443 3333332 345555555555555445555555555555555555554333344556666666666666
Q ss_pred cCCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 378 FSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 378 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
|++..+..|..+++|++|+|++|+|.+.++
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred cceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 665555556666666666666666665443
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=5.6e-13 Score=126.98 Aligned_cols=104 Identities=25% Similarity=0.313 Sum_probs=67.3
Q ss_pred cEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCC
Q 042086 80 STLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGN 159 (784)
Q Consensus 80 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (784)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 35677777775 4555443 66777777777777666666777777777777777776554455566666666666666
Q ss_pred CcccccCCccccccccceeeccccccC
Q 042086 160 SLSGSIPSIIGNLKSLFYLHLSSNQLS 186 (784)
Q Consensus 160 ~l~~~~~~~l~~l~~L~~L~L~~n~l~ 186 (784)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544445666666666666666655
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.39 E-value=1.4e-11 Score=134.02 Aligned_cols=297 Identities=10% Similarity=0.049 Sum_probs=152.1
Q ss_pred cCCCCcCCCC-CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCc---cCCCCCcCccCCCcCcEEeecCCCcccccCC
Q 042086 92 SIPFSFGNLT-NLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQ---LSGSIPPTLGNLSNLAVLHLYGNSLSGSIPS 167 (784)
Q Consensus 92 ~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~ 167 (784)
+...+|.++. .|+.+.+..+ ++.+-..+|.+|++|+.+.++.|. ++.....+|..+.+|+.+.+..+ ++.....
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 3444555553 4666666543 554555566666666666665543 44334455666666666655544 3334445
Q ss_pred ccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCccccccCCCCcCCCCc
Q 042086 168 IIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSGVIPLSIGNLNNL 247 (784)
Q Consensus 168 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 247 (784)
+|.++.+|+.+.+..+- .......|..+.+|+.+.+..+ +..+...+|.+ .+|+.+.+..+-.. ....+|.++.++
T Consensus 132 aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l 207 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFAL 207 (394)
T ss_dssp TTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTC
T ss_pred hhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcccc
Confidence 56666666666665432 2233445566666666666543 33333444443 45666665543322 444555566666
Q ss_pred ceEEecCCCCCCCCcccc--------------cccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCccc
Q 042086 248 IGLYLYDNQLSVGEIPIE--------------IGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPET 313 (784)
Q Consensus 248 ~~L~L~~n~l~~~~~~~~--------------l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 313 (784)
+......+.... +... +.....+..+.+.+ .++.....+|..+.+|+.+.+..+..+ .....
T Consensus 208 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~a 283 (394)
T 4gt6_A 208 STITSDSESYPA--IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGA 283 (394)
T ss_dssp CEEEECCSSSCB--SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTT
T ss_pred ceeccccccccc--ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcc
Confidence 655554433221 0000 01111222233221 222233445666666666666544332 33445
Q ss_pred ccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccce
Q 042086 314 LGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLS 393 (784)
Q Consensus 314 l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 393 (784)
|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.....+|.++.+|+.+.|..+ ++.....+|.++.+|+
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 5566666666664 3444444555666666666666543 44334455666666666666433 5545555666666666
Q ss_pred EEEcCCCC
Q 042086 394 CIDVSYNE 401 (784)
Q Consensus 394 ~l~l~~N~ 401 (784)
.+++.+|.
T Consensus 361 ~i~~~~~~ 368 (394)
T 4gt6_A 361 NIEYSGSR 368 (394)
T ss_dssp EEEESSCH
T ss_pred EEEECCce
Confidence 66666553
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.37 E-value=7.4e-15 Score=157.87 Aligned_cols=166 Identities=20% Similarity=0.175 Sum_probs=84.1
Q ss_pred cCCceeeccccccCCccchhhhcc-----cccceeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccc
Q 042086 197 SNLVVLHLFENSLFGSIPSILGNL-----KMLLHLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSS 271 (784)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~ 271 (784)
+.|+.|+|++|.++......+... ++|+.|+|++|.++......+ ...+++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l------------------------~~~L~~ 127 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTL------------------------LPVFLR 127 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHT------------------------HHHHHT
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHH------------------------HHHHHh
Confidence 456666666666654433333332 355555555555543222111 223344
Q ss_pred cceEeccCccccCCCCccc-----cCCCccceeecccCccCCC----CcccccccccceEEecccccccCC----Cchhh
Q 042086 272 LNYLVLNGNQLYGNLPRAL-----GSLTELEYLDLSTNKLGNS----IPETLGNLLKLHYLNLSNNQFRKG----FPVEL 338 (784)
Q Consensus 272 L~~L~l~~n~l~~~~~~~l-----~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~ls~N~l~~~----~~~~~ 338 (784)
|+.|+|++|.++......+ ...++|++|+|++|.++.. ++..+..+++|++|+|++|.|+.. ++..+
T Consensus 128 L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred ccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 5555555555543222222 1235566666666665532 222334556666666666666542 23444
Q ss_pred hcccccCeeccCCcccccc----ccccccccccccEEecCCCccCCCCcccc
Q 042086 339 EKLIQLSELDLSLNILEGK----IPCEICNMESLEKLNLSHNNFSGLIPSCF 386 (784)
Q Consensus 339 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 386 (784)
...++|+.|+|++|.|++. ++..+...++|+.|+|++|.|+......+
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 5556666666666666543 22333345667777777777665444433
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=1.8e-12 Score=138.65 Aligned_cols=96 Identities=23% Similarity=0.197 Sum_probs=67.1
Q ss_pred cccccCCCCcCCCCCCCEEEccC-CcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccC
Q 042086 88 KLNGSIPFSFGNLTNLAIMYLYR-NSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIP 166 (784)
Q Consensus 88 ~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 166 (784)
+|+. +|. |..+++|++|+|++ |.|++..+..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+
T Consensus 20 ~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 97 (347)
T 2ifg_A 20 ALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSW 97 (347)
T ss_dssp CCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCS
T ss_pred CCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCH
Confidence 4442 566 77777777777775 77777666777777777777777777777777777777777777777777775555
Q ss_pred CccccccccceeeccccccC
Q 042086 167 SIIGNLKSLFYLHLSSNQLS 186 (784)
Q Consensus 167 ~~l~~l~~L~~L~L~~n~l~ 186 (784)
..|..++ |+.|+|.+|.+.
T Consensus 98 ~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 98 KTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TTTCSCC-CCEEECCSSCCC
T ss_pred HHcccCC-ceEEEeeCCCcc
Confidence 5555554 777777777665
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=4.4e-11 Score=130.13 Aligned_cols=311 Identities=9% Similarity=0.067 Sum_probs=210.3
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCc---ccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcE
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNS---LSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAV 153 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 153 (784)
..|+.+.|-.+ ++.....+|.++++|+.+.+..|. ++.+-..+|..+.+|+.+.+..+ ++.....+|..+.+|+.
T Consensus 64 ~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 64 YVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp SCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred CcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 35888888754 777788899999999999998874 66666788999999999988765 45456678899999999
Q ss_pred EeecCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcc
Q 042086 154 LHLYGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHL 233 (784)
Q Consensus 154 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 233 (784)
+.+..+ +......+|.++.+|+.+.+..+ ++......|. ..+|+.+.+..+- .......|.++.+|+......+..
T Consensus 142 i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~ 217 (394)
T 4gt6_A 142 VTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKV-TRIGTNAFSECFALSTITSDSESY 217 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSSS
T ss_pred ccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcc-cccccchhhhccccceeccccccc
Confidence 999765 44466778899999999999866 4423344554 4678888886543 335566788888887776655544
Q ss_pred ccccCCCC-------------cCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceee
Q 042086 234 SGVIPLSI-------------GNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLD 300 (784)
Q Consensus 234 ~~~~~~~l-------------~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 300 (784)
.......+ .....+..+.+..+ ++ .--...|..+..|+.+.+.++... ....+|.++++|+.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~-~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 218 PAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VA-RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIE 294 (394)
T ss_dssp CBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EE-EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEE
T ss_pred ccccceeecccccccccccccccccccceEEcCCc-ce-EcccceeeecccccEEecccccce-ecCccccccccccccc
Confidence 31111111 11122333333221 11 011225677788888888766543 5567788888888888
Q ss_pred cccCccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCC
Q 042086 301 LSTNKLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSG 380 (784)
Q Consensus 301 Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 380 (784)
+. +.++......|.++.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.+|....
T Consensus 295 l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~ 371 (394)
T 4gt6_A 295 FS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW 371 (394)
T ss_dssp CC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH
T ss_pred CC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh
Confidence 86 4555455667888888999988764 66666778888889999988655 664556788888999999998886542
Q ss_pred CCcccccCcccceEEEcCCCCC
Q 042086 381 LIPSCFEGMHGLSCIDVSYNEL 402 (784)
Q Consensus 381 ~~p~~~~~l~~L~~l~l~~N~l 402 (784)
..+....+|+.+.+..|.+
T Consensus 372 ---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 372 ---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ---HTCBCCCCC----------
T ss_pred ---hhhhccCCCCEEEeCCCCE
Confidence 4566677788887766543
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=2.2e-14 Score=154.12 Aligned_cols=187 Identities=17% Similarity=0.071 Sum_probs=82.3
Q ss_pred cccceeeccccccCCCccccccC-----ccCCceeeccccccCCccchhh-hcccccceeccCCCccccccCCCC-----
Q 042086 173 KSLFYLHLSSNQLSGSIPISLGN-----LSNLVVLHLFENSLFGSIPSIL-GNLKMLLHLGLSTNHLSGVIPLSI----- 241 (784)
Q Consensus 173 ~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~l----- 241 (784)
++|++|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 34555555555555332222221 2466666666666643322222 335566677777776654332222
Q ss_pred cCCCCcceEEecCCCCCCC---CcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccc
Q 042086 242 GNLNNLIGLYLYDNQLSVG---EIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLL 318 (784)
Q Consensus 242 ~~l~~L~~L~L~~n~l~~~---~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 318 (784)
...++|++|+|++|.++.. .++..+..+++|++|+|++|.+++.... .++..+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~~ 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRNR 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGCS
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcCC
Confidence 1234445555555544311 1112223334444444444444321100 1122334444
Q ss_pred cceEEecccccccCC----CchhhhcccccCeeccCCccccccccccccccc-----cccEEe--cCCCccC
Q 042086 319 KLHYLNLSNNQFRKG----FPVELEKLIQLSELDLSLNILEGKIPCEICNME-----SLEKLN--LSHNNFS 379 (784)
Q Consensus 319 ~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~--L~~N~l~ 379 (784)
+|++|+|++|.|+.. ++..+...++|+.|||++|.|++.....+..+. .|+.+. +..|.+.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 555555555555432 223334455666666666666554444443321 155565 5555554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=9.2e-12 Score=133.10 Aligned_cols=106 Identities=25% Similarity=0.165 Sum_probs=92.7
Q ss_pred CEEEccCC-cccccCCCCCCCCCCCCEEEccC-CccCCCCCcCccCCCcCcEEeecCCCcccccCCccccccccceeecc
Q 042086 104 AIMYLYRN-SLSASIPPVIGNLKFLYHLDLSE-NQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSLFYLHLS 181 (784)
Q Consensus 104 ~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 181 (784)
..++++++ +++ .+|. |..+++|++|+|++ |.|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688887 888 4788 99999999999996 99998888899999999999999999999888999999999999999
Q ss_pred ccccCCCccccccCccCCceeeccccccCCc
Q 042086 182 SNQLSGSIPISLGNLSNLVVLHLFENSLFGS 212 (784)
Q Consensus 182 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 212 (784)
+|+|++..+..|..++ |+.|+|.+|.+...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999976666676666 99999999998744
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=5.9e-11 Score=121.36 Aligned_cols=148 Identities=15% Similarity=0.069 Sum_probs=115.8
Q ss_pred HHHHhcCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEecCCc
Q 042086 510 IVRATNGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSHPRN 588 (784)
Q Consensus 510 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 588 (784)
+....+.|++...++.|+.+.||++... ++.+++|....... .....+.+|+.+++.+. +..+.++++++.+.+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 3445568988899999999999999765 68999999865321 22346899999999984 6778899999988889
Q ss_pred eEEEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------------
Q 042086 589 SFLVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC------------------------------- 637 (784)
Q Consensus 589 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------- 637 (784)
.++||||++|.+|.+.+... .....++.+++++++.||+..
T Consensus 85 ~~lv~e~i~G~~l~~~~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCCTT--------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccCCc--------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 99999999999998763211 123467889999999999810
Q ss_pred -------------------------CCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 638 -------------------------FPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 638 -------------------------~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
.+.++|||+++.||+++++..+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998765567999997753
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.10 E-value=5.1e-09 Score=113.13 Aligned_cols=284 Identities=12% Similarity=0.022 Sum_probs=139.9
Q ss_pred CcccEEeCCCCcccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEee
Q 042086 77 KSLSTLDLSKNKLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHL 156 (784)
Q Consensus 77 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (784)
.+|+.+.+.. +++.+...+|.+|.+|+.+.|..+ ++.+-..+|.++ +|+.+.+..+ +......+|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 4566666643 466566677888888888888644 665556677776 5777766543 44233344444 46777777
Q ss_pred cCCCcccccCCccccccccceeeccccccCCCccccccCccCCceeeccccccCCc------------cchhhhcccccc
Q 042086 157 YGNSLSGSIPSIIGNLKSLFYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGS------------IPSILGNLKMLL 224 (784)
Q Consensus 157 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------~~~~l~~l~~L~ 224 (784)
..+ +......+|.+. +|+.+.+..+ ++......|..+.+++.+.+..+..... ....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 655 332334455443 4555555443 3323445566666666666554432111 111122222333
Q ss_pred eeccCCCccccccCCCCcCCCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccC
Q 042086 225 HLGLSTNHLSGVIPLSIGNLNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTN 304 (784)
Q Consensus 225 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 304 (784)
.+.+..+. .......+....+|+.+.+..+--. -....+..+..|+.+.+..+ ++.....+|..+.+|+.+.+..+
T Consensus 198 ~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~~~~--i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~ 273 (379)
T 4h09_A 198 EFTIPSTV-KTVTAYGFSYGKNLKKITITSGVTT--LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK 273 (379)
T ss_dssp EEECCTTC-CEECTTTTTTCSSCSEEECCTTCCE--ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC
T ss_pred ccccccce-eEEeecccccccccceeeeccceeE--EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc
Confidence 33332221 1123334445555555555433211 11123444555555555443 33333445555555555555432
Q ss_pred ccCCCCcccccccccceEEecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecC
Q 042086 305 KLGNSIPETLGNLLKLHYLNLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLS 374 (784)
Q Consensus 305 ~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 374 (784)
++......|.++++|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+.
T Consensus 274 -i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 274 -VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp -CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred -ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 33233334555555555555555555444455555555555555433 332333445555555555543
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=2.6e-10 Score=116.37 Aligned_cols=138 Identities=16% Similarity=0.113 Sum_probs=102.0
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc--eeeEEeEEecCCceEEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFYGFCSHPRNSFLV 592 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv 592 (784)
..+.+....+.|..+.||++...+|+.+++|..... ....+..|+.+++.+.+.+ +.+++++...++..++|
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 345544333456679999998777888999986542 2356889999999985444 55688988887889999
Q ss_pred EecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 042086 593 YEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC----------------------------------- 637 (784)
Q Consensus 593 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 637 (784)
|||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998874 211 11 2256778888888888742
Q ss_pred --------------------CCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 638 --------------------FPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 638 --------------------~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
.+.++|||++|.||++++++.+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11289999999999998776677999998764
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.06 E-value=2.9e-11 Score=128.65 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=51.3
Q ss_pred CCCccceeecccCccCCCCccccc---ccccceEEecccccccCC----CchhhhcccccCeeccCCccccccccccccc
Q 042086 292 SLTELEYLDLSTNKLGNSIPETLG---NLLKLHYLNLSNNQFRKG----FPVELEKLIQLSELDLSLNILEGKIPCEICN 364 (784)
Q Consensus 292 ~l~~L~~L~Ls~n~l~~~~~~~l~---~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 364 (784)
.+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356677777777666543333332 466777777777777653 2333456677888888877777554444433
Q ss_pred cccccEEecCCCc
Q 042086 365 MESLEKLNLSHNN 377 (784)
Q Consensus 365 l~~L~~L~L~~N~ 377 (784)
.- ...+++++|+
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 3557777776
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.04 E-value=1.2e-10 Score=124.03 Aligned_cols=84 Identities=19% Similarity=0.244 Sum_probs=62.9
Q ss_pred ccccceEEecccccccCCCchhhh---cccccCeeccCCcccccc----ccccccccccccEEecCCCccCCCCcccccC
Q 042086 316 NLLKLHYLNLSNNQFRKGFPVELE---KLIQLSELDLSLNILEGK----IPCEICNMESLEKLNLSHNNFSGLIPSCFEG 388 (784)
Q Consensus 316 ~l~~L~~L~ls~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 388 (784)
.+++|++|+|++|.+....+..+. .+++|+.|+|+.|.+.+. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 478999999999998764444443 488999999999999874 3444456799999999999887654444443
Q ss_pred -cccceEEEcCCCC
Q 042086 389 -MHGLSCIDVSYNE 401 (784)
Q Consensus 389 -l~~L~~l~l~~N~ 401 (784)
+ ...++++.|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3568898886
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.99 E-value=1.1e-08 Score=110.52 Aligned_cols=291 Identities=9% Similarity=0.014 Sum_probs=204.5
Q ss_pred CcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecCCCcccccCCcccccccc
Q 042086 96 SFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLKSL 175 (784)
Q Consensus 96 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 175 (784)
.+....+|+.+.+.. .++.+-..+|.+|.+|+.++|..+ ++.....+|.+. +|+.+.+..+ +......+|.+. +|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 355667899998875 467667789999999999999754 665666778776 7888888755 554555667664 79
Q ss_pred ceeeccccccCCCccccccCccCCceeeccccccCCccchhhhcccccceeccCCCcccc------------ccCCCCcC
Q 042086 176 FYLHLSSNQLSGSIPISLGNLSNLVVLHLFENSLFGSIPSILGNLKMLLHLGLSTNHLSG------------VIPLSIGN 243 (784)
Q Consensus 176 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~------------~~~~~l~~ 243 (784)
+.+.+..+-.. .....|.+. +|+.+.+..+ ++.+....|.++..++.+.+..+.... .....+..
T Consensus 116 ~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCcccc-ccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 99999876332 334445543 5666665543 444556678888888887776544321 11223344
Q ss_pred CCCcceEEecCCCCCCCCcccccccccccceEeccCccccCCCCccccCCCccceeecccCccCCCCcccccccccceEE
Q 042086 244 LNNLIGLYLYDNQLSVGEIPIEIGKLSSLNYLVLNGNQLYGNLPRALGSLTELEYLDLSTNKLGNSIPETLGNLLKLHYL 323 (784)
Q Consensus 244 l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 323 (784)
..++..+.+..+.-. .....+..+.+|+.+.+..+ +......++..+.+|+.+.+..+ ++......|.++.+|+.+
T Consensus 193 ~~~~~~~~~~~~~~~--i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i 268 (379)
T 4h09_A 193 AKTGTEFTIPSTVKT--VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTL 268 (379)
T ss_dssp TCCCSEEECCTTCCE--ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred cccccccccccceeE--Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccc
Confidence 455555555443322 12234566778888888665 34355678888999999999776 555566778888999999
Q ss_pred ecccccccCCCchhhhcccccCeeccCCccccccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCC
Q 042086 324 NLSNNQFRKGFPVELEKLIQLSELDLSLNILEGKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYN 400 (784)
Q Consensus 324 ~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N 400 (784)
.+..+ +..+....|.++.+|+.+++.++.++......|.++.+|+.+.|..+ ++.....+|.++.+|+.+.+..+
T Consensus 269 ~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 269 NFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 98654 66556678899999999999998888666778899999999999755 66666778999999998887543
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=1.8e-09 Score=115.85 Aligned_cols=143 Identities=14% Similarity=0.220 Sum_probs=106.8
Q ss_pred CceeEecccceEEEEEEEcCCCEEEEEEcC--CCCCCCCCChhhHHHHHHHHhccC--CCceeeEEeEEecC---CceEE
Q 042086 519 VKYCIGIGGQGSVYKAKLTSGEILAVKKFH--SLWPCEMVPQPEFVNEIKTLTELR--HRSIVKFYGFCSHP---RNSFL 591 (784)
Q Consensus 519 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~l 591 (784)
..+.++.|.++.||+....+ ..+++|+.. ... .......+.+|+.+++.+. +..+.++++++.+. +..++
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~--~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSK--LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCC--CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 45779999999999998764 678888765 321 1122457889999999996 45688999988766 45899
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDC---------------------------------- 637 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 637 (784)
||||++|..+.+. ....++...+..++.+++++|+.||+..
T Consensus 119 vme~v~G~~l~~~-----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 119 IMEFVSGRVLWDQ-----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEECCCCBCCCCT-----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEecCCeecCCC-----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 9999999776431 1224667888899999999999999731
Q ss_pred ---------------------CCCeEEeCCCCCCeeecCCCc--eEEeccccccc
Q 042086 638 ---------------------FPPIVHRDISSKNVLLCLDYE--ARVSDFGIAKF 669 (784)
Q Consensus 638 ---------------------~~~ivH~Dlk~~Nill~~~~~--~kl~DfG~a~~ 669 (784)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246899999999999997753 68999998874
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.84 E-value=1.1e-10 Score=117.61 Aligned_cols=63 Identities=32% Similarity=0.442 Sum_probs=30.7
Q ss_pred CCCCCCEEEccCCccCC--CCCcCccCCCcCcEEeecCCCcccccCCcccccc--ccceeeccccccCC
Q 042086 123 NLKFLYHLDLSENQLSG--SIPPTLGNLSNLAVLHLYGNSLSGSIPSIIGNLK--SLFYLHLSSNQLSG 187 (784)
Q Consensus 123 ~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~--~L~~L~L~~n~l~~ 187 (784)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 45556666666666654 2334444555555555555555532 1222222 44444444444443
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=1.6e-09 Score=113.30 Aligned_cols=185 Identities=18% Similarity=0.202 Sum_probs=121.7
Q ss_pred ceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhcc-CCCc--eeeEEeEEecCC---ceEEEE
Q 042086 520 KYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTEL-RHRS--IVKFYGFCSHPR---NSFLVY 593 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~ 593 (784)
.+.++.|....||+.. +.+++|+.... .....+.+|+.+++.+ .+.. +.+++.+..... ..++||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4568999999999863 46888875431 2346789999999888 3333 345555543333 347899
Q ss_pred ecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-------------------------------------
Q 042086 594 EYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD------------------------------------- 636 (784)
Q Consensus 594 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------- 636 (784)
|+++|.++.+... ..++...+..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9999988765332 1355667778888888888888861
Q ss_pred ------------------CCCCeEEeCCCCCCeeecC--CCceEEeccccccccCCCCCcccc--------------ccc
Q 042086 637 ------------------CFPPIVHRDISSKNVLLCL--DYEARVSDFGIAKFLKPDSSNCTE--------------LVG 682 (784)
Q Consensus 637 ------------------~~~~ivH~Dlk~~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~--------------~~g 682 (784)
..+.++|+|++|.||++++ +..+.|+||+.+..-.+...-... ...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 1135799999999999998 456789999998754321100000 000
Q ss_pred cccccc-ccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 042086 683 TFGYIA-PELVYTMKVTEKCDVYSFGVLALEVIKGDHPR 720 (784)
Q Consensus 683 t~~y~a-PE~~~~~~~~~~sDvwslGv~l~elltg~~p~ 720 (784)
..++.. |+.... .....+.|++|.++|++.+|+.+|
T Consensus 251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111122 222111 123468999999999999999886
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=7.9e-08 Score=101.02 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=101.0
Q ss_pred CCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCC----CceeeEEeEEecCCceEE
Q 042086 516 GFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH----RSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 516 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~l 591 (784)
.+...+.++.|....||+. |+.+++|+.... .....+.+|+.+++.+.+ ..+.+++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 6777889999999999998 667888875431 123568899999988865 234455554 56789
Q ss_pred EEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC---------------------------------
Q 042086 592 VYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCF--------------------------------- 638 (784)
Q Consensus 592 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~--------------------------------- 638 (784)
||||++|.++.+... ..++...+..++.++++.++.||+...
T Consensus 105 vme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 999999988864321 134556666777788888888775322
Q ss_pred ---------------------------CCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 639 ---------------------------PPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 639 ---------------------------~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999998754
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.3e-08 Score=97.64 Aligned_cols=92 Identities=18% Similarity=0.135 Sum_probs=46.9
Q ss_pred ccccccccceEeccCc-cccCC----CCccccCCCccceeecccCccCCCC----cccccccccceEEecccccccCC--
Q 042086 265 EIGKLSSLNYLVLNGN-QLYGN----LPRALGSLTELEYLDLSTNKLGNSI----PETLGNLLKLHYLNLSNNQFRKG-- 333 (784)
Q Consensus 265 ~l~~l~~L~~L~l~~n-~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~ls~N~l~~~-- 333 (784)
.+...++|++|+|++| .+... +...+...++|++|+|++|.++... ...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3445566777777776 66532 2233444566666666666665422 22233335555666666555532
Q ss_pred --CchhhhcccccCeecc--CCccccc
Q 042086 334 --FPVELEKLIQLSELDL--SLNILEG 356 (784)
Q Consensus 334 --~~~~~~~l~~L~~L~L--s~N~l~~ 356 (784)
+...+...++|++|+| ++|.++.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 2333344445555555 4455443
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.4e-08 Score=97.38 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=57.4
Q ss_pred CcCCCCcceEEecCC-CCCCC---CcccccccccccceEeccCccccCC----CCccccCCCccceeecccCccCCC---
Q 042086 241 IGNLNNLIGLYLYDN-QLSVG---EIPIEIGKLSSLNYLVLNGNQLYGN----LPRALGSLTELEYLDLSTNKLGNS--- 309 (784)
Q Consensus 241 l~~l~~L~~L~L~~n-~l~~~---~~~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~--- 309 (784)
+...++|++|+|++| .+... .+...+...++|++|+|++|.+... +...+...++|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 444556666666666 55421 1222334445666666666666432 122333445566666666666542
Q ss_pred -CcccccccccceEEec--ccccccCC----CchhhhcccccCeeccCCcccc
Q 042086 310 -IPETLGNLLKLHYLNL--SNNQFRKG----FPVELEKLIQLSELDLSLNILE 355 (784)
Q Consensus 310 -~~~~l~~l~~L~~L~l--s~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 355 (784)
+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334444556666666 55666542 2223333345555555555443
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=2.7e-08 Score=100.16 Aligned_cols=79 Identities=30% Similarity=0.339 Sum_probs=38.7
Q ss_pred ccccceEEecccccccC--CCchhhhcccccCeeccCCccccccccccccccc--cccEEecCCCccCCCCcc-------
Q 042086 316 NLLKLHYLNLSNNQFRK--GFPVELEKLIQLSELDLSLNILEGKIPCEICNME--SLEKLNLSHNNFSGLIPS------- 384 (784)
Q Consensus 316 ~l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~------- 384 (784)
++++|+.|+|++|+|++ .++..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++++..|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34455555555555554 2234444555555555555555533 1222222 556666666666554432
Q ss_pred cccCcccceEEE
Q 042086 385 CFEGMHGLSCID 396 (784)
Q Consensus 385 ~~~~l~~L~~l~ 396 (784)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 244455555554
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.37 E-value=2.2e-06 Score=88.08 Aligned_cols=77 Identities=18% Similarity=0.175 Sum_probs=61.5
Q ss_pred CCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCC---ceeeEEeEEecCCceEEEEe
Q 042086 518 DVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR---SIVKFYGFCSHPRNSFLVYE 594 (784)
Q Consensus 518 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e 594 (784)
...+.|+.|.++.||++...+|+.++||+.... .......|..|+..++.+.+. .+.+++++. ..++|||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~---~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD---APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT---CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC---CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 446789999999999999989999999986532 122346789999999999765 577888764 3689999
Q ss_pred cccCCCH
Q 042086 595 YLERGSL 601 (784)
Q Consensus 595 ~~~~gsL 601 (784)
|++++++
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999864
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33 E-value=2.4e-06 Score=87.31 Aligned_cols=142 Identities=16% Similarity=0.178 Sum_probs=101.0
Q ss_pred hcCCCCceeEecccce-EEEEEEEc-CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEecCCceE
Q 042086 514 TNGFDVKYCIGIGGQG-SVYKAKLT-SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 514 ~~~~~~~~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 590 (784)
...|+. +.+..|..| .||+.... ++..+++|+-... ...++.+|+..++.+. +--+.++++++.+++..+
T Consensus 24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~ 96 (272)
T 4gkh_A 24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAW 96 (272)
T ss_dssp HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEE
Confidence 344543 456666665 68988765 5678899975432 3557889999998884 334678899999889999
Q ss_pred EEEecccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhC----------------------------------
Q 042086 591 LVYEYLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD---------------------------------- 636 (784)
Q Consensus 591 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------------- 636 (784)
+|||++++.++.+...... .....+..++++.++.||+.
T Consensus 97 lvme~l~G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (272)
T 4gkh_A 97 LLTTAIPGKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDD 169 (272)
T ss_dssp EEEECCCSEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCG
T ss_pred EEEEeeCCccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccc
Confidence 9999999988877653221 12334556666666766642
Q ss_pred ---------------------CCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 637 ---------------------CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 637 ---------------------~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
..+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 170 ERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 011378999999999999877777999998764
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=5.7e-06 Score=86.03 Aligned_cols=138 Identities=17% Similarity=0.130 Sum_probs=94.4
Q ss_pred CceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCC---ceeeEEeEEe-cCCceEEEEe
Q 042086 519 VKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR---SIVKFYGFCS-HPRNSFLVYE 594 (784)
Q Consensus 519 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e 594 (784)
-.+.++.|....||+. |+.+++|+-.. ......+.+|+.+++.+.+. .+.+++.+.. ..+..++|||
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 3467889999999988 56788887432 12346789999999999642 3567777774 4556789999
Q ss_pred cccCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--------------------------------------
Q 042086 595 YLERGSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHD-------------------------------------- 636 (784)
Q Consensus 595 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------------------- 636 (784)
|++|.++.+.... .++...+..++.++++.++.||+.
T Consensus 94 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999887653211 123334444455555555555432
Q ss_pred -------------------CCCCeEEeCCCCCCeeecC---CCc-eEEecccccccc
Q 042086 637 -------------------CFPPIVHRDISSKNVLLCL---DYE-ARVSDFGIAKFL 670 (784)
Q Consensus 637 -------------------~~~~ivH~Dlk~~Nill~~---~~~-~kl~DfG~a~~~ 670 (784)
..+.++|+|+++.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235699999999999987 455 489999988754
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=8e-06 Score=86.98 Aligned_cols=146 Identities=12% Similarity=0.142 Sum_probs=92.8
Q ss_pred CCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc--eeeEEeEEecC-CceEEE
Q 042086 516 GFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IVKFYGFCSHP-RNSFLV 592 (784)
Q Consensus 516 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv 592 (784)
.....+.++.|....+|+... +++.+++|.... ...+..|+.+++.+.... +.++++++... +..++|
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~--------~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSC--------ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESC--------CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCc--------hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 344567789999999999876 578899998643 236889999999886433 56777777654 568999
Q ss_pred EecccCCCHHHH------------------HhcCCCC-----C---------CCCHHHH---------------------
Q 042086 593 YEYLERGSLATI------------------LSNDGAI-----E---------EFNWTVR--------------------- 619 (784)
Q Consensus 593 ~e~~~~gsL~~~------------------l~~~~~~-----~---------~l~~~~~--------------------- 619 (784)
|||++|.++.+. ++..... . .-.|...
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998655321 1111000 0 0011111
Q ss_pred HHHHHHHHHHHHHHhhCC-CCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 620 MNVIRSVANALSYMHHDC-FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 620 ~~i~~~i~~~l~~LH~~~-~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
......+...++++.... .+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 011112222333332211 146799999999999987777889999988754
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.16 E-value=4.7e-06 Score=88.86 Aligned_cols=83 Identities=7% Similarity=0.061 Sum_probs=57.1
Q ss_pred ceeE-ecccceEEEEEEEc-------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-C--CceeeEEeEEecC--
Q 042086 520 KYCI-GIGGQGSVYKAKLT-------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-H--RSIVKFYGFCSHP-- 586 (784)
Q Consensus 520 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 586 (784)
.+.| +.|....+|+.... +++.+++|...............+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998754 26788999765421000111356889999998884 3 3567788887655
Q ss_pred -CceEEEEecccCCCHH
Q 042086 587 -RNSFLVYEYLERGSLA 602 (784)
Q Consensus 587 -~~~~lv~e~~~~gsL~ 602 (784)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999986654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.07 E-value=6.9e-07 Score=83.30 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=44.9
Q ss_pred CCCEEEccCCccCCCCCcCccCCCcCcEEeecCCC-cccccCCccccc----cccceeeccccc-cCCCccccccCccCC
Q 042086 126 FLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYGNS-LSGSIPSIIGNL----KSLFYLHLSSNQ-LSGSIPISLGNLSNL 199 (784)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L 199 (784)
+|++|||++|.++...-..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554444445555556666666553 443332333332 356666666653 554444455566677
Q ss_pred ceeeccccc
Q 042086 200 VVLHLFENS 208 (784)
Q Consensus 200 ~~L~L~~n~ 208 (784)
++|+|++|.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776664
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.04 E-value=1.4e-06 Score=81.27 Aligned_cols=83 Identities=14% Similarity=0.144 Sum_probs=43.4
Q ss_pred ccceeecccCccCCCCcccccccccceEEeccccc-ccCCCchhhhcc----cccCeeccCCcc-ccccccccccccccc
Q 042086 295 ELEYLDLSTNKLGNSIPETLGNLLKLHYLNLSNNQ-FRKGFPVELEKL----IQLSELDLSLNI-LEGKIPCEICNMESL 368 (784)
Q Consensus 295 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L 368 (784)
+|+.||+++|.++......+..+++|++|+|++|. ++...-..++.+ ++|++|+|++|. +++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554444445555555555555553 444333334432 245666666552 554444445556666
Q ss_pred cEEecCCCc
Q 042086 369 EKLNLSHNN 377 (784)
Q Consensus 369 ~~L~L~~N~ 377 (784)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666654
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.98 E-value=3.3e-05 Score=83.54 Aligned_cols=78 Identities=15% Similarity=0.028 Sum_probs=51.3
Q ss_pred ceeEecccceEEEEEEEc-CCCEEEEEEcCCCCC----CCCCChhhHHHHHHHHhccC-C-C-ceeeEEeEEecCCceEE
Q 042086 520 KYCIGIGGQGSVYKAKLT-SGEILAVKKFHSLWP----CEMVPQPEFVNEIKTLTELR-H-R-SIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~~~E~~~l~~l~-h-~-niv~l~~~~~~~~~~~l 591 (784)
.+.+|.|..+.||++... +++.|+||....... ......+.+..|+++++.+. + | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999764 578899998654321 00123456788999998773 2 3 34455544 3455689
Q ss_pred EEecccCC
Q 042086 592 VYEYLERG 599 (784)
Q Consensus 592 v~e~~~~g 599 (784)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.81 E-value=8.3e-05 Score=78.53 Aligned_cols=141 Identities=19% Similarity=0.260 Sum_probs=81.1
Q ss_pred eeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCC--CceeeEEe------EEecCCceEEE
Q 042086 521 YCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRH--RSIVKFYG------FCSHPRNSFLV 592 (784)
Q Consensus 521 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv 592 (784)
+.|+.|..+.||+....+| .+++|+... ...++..|+.+++.+.. -.+.+++. +....+..++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~-------~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR-------PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS-------CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC-------CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4466677899999987655 488998764 13445556666665531 12333332 12345678899
Q ss_pred EecccCCCHH--------------HHHhc--CCC--C-------CCCCHHHH----------------------------
Q 042086 593 YEYLERGSLA--------------TILSN--DGA--I-------EEFNWTVR---------------------------- 619 (784)
Q Consensus 593 ~e~~~~gsL~--------------~~l~~--~~~--~-------~~l~~~~~---------------------------- 619 (784)
|||++|.++. ..+|. ... . ..-.|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986432 11111 100 0 01123211
Q ss_pred ---HHHHHHHHHHHHHHhh----------CCCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 620 ---MNVIRSVANALSYMHH----------DCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 620 ---~~i~~~i~~~l~~LH~----------~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
..+...+.+++++|+. ...+.++|||+++.||+++.++.+.|+||+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111224456667763 0234899999999999998888899999998764
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.65 E-value=0.00036 Score=75.90 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=47.6
Q ss_pred CCeEEeCCCCCCeeecCCCceEEeccccccccCCCCCccccccc--ccccccccccccC---CcCcchhHHHHHHHHHHH
Q 042086 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCTELVG--TFGYIAPELVYTM---KVTEKCDVYSFGVLALEV 713 (784)
Q Consensus 639 ~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDvwslGv~l~el 713 (784)
+.++|||+++.||+++.++ ++++||+.+..-.+...- ..... ...|++|+..... +.....++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3789999999999998776 999999988753221100 00111 1346666655321 122345566777788877
Q ss_pred HhC
Q 042086 714 IKG 716 (784)
Q Consensus 714 ltg 716 (784)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.63 E-value=0.00019 Score=74.32 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=93.1
Q ss_pred CceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC---CCceeeEEeEEecCCceEEEEec
Q 042086 519 VKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR---HRSIVKFYGFCSHPRNSFLVYEY 595 (784)
Q Consensus 519 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~ 595 (784)
-.+.|+.|....+|+... +++.+++|+.... ....|..|+..++.+. ...+.+++++....+..++||||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 346799999999999986 4678889986532 2567899999998883 36788899998888889999999
Q ss_pred ccCCCHH--------H---HHhcCCCCC-------------------CCCHHHHH---HHHH----------------HH
Q 042086 596 LERGSLA--------T---ILSNDGAIE-------------------EFNWTVRM---NVIR----------------SV 626 (784)
Q Consensus 596 ~~~gsL~--------~---~l~~~~~~~-------------------~l~~~~~~---~i~~----------------~i 626 (784)
+++..+. + .+|...... .-+|.... ++.. .+
T Consensus 113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l 192 (312)
T 3jr1_A 113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI 192 (312)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 9987541 1 122221100 12454321 1111 11
Q ss_pred H-HHHHHHhh-CCCCCeEEeCCCCCCeeecCCCceEEeccc
Q 042086 627 A-NALSYMHH-DCFPPIVHRDISSKNVLLCLDYEARVSDFG 665 (784)
Q Consensus 627 ~-~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 665 (784)
+ +....|.. ...+.++|+|+.+.||+++.++ +.|.||.
T Consensus 193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 11223432 2245789999999999999887 8899984
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.57 E-value=0.00037 Score=71.55 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=57.6
Q ss_pred cCCCCceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-C--CceeeEEeEEecCCceEE
Q 042086 515 NGFDVKYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-H--RSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 515 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~l 591 (784)
.+..-++.+|.|..+.||+.+..+|+.|++|+..... ......|..|+..|+.+. . --+.+++++. ..++
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~---~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC---cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 3456678899999999999999999999999865432 223446889999998884 2 1344555543 3478
Q ss_pred EEecccCCC
Q 042086 592 VYEYLERGS 600 (784)
Q Consensus 592 v~e~~~~gs 600 (784)
||||++++.
T Consensus 88 v~e~l~~~~ 96 (288)
T 3f7w_A 88 AMEWVDERP 96 (288)
T ss_dssp EEECCCCCC
T ss_pred EEEeecccC
Confidence 999998764
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.51 E-value=1.7e-05 Score=75.43 Aligned_cols=14 Identities=14% Similarity=0.387 Sum_probs=5.9
Q ss_pred CccceeecccCccC
Q 042086 294 TELEYLDLSTNKLG 307 (784)
Q Consensus 294 ~~L~~L~Ls~n~l~ 307 (784)
+.|+.|+|++|.|.
T Consensus 70 ~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 70 KHIEKFSLANTAIS 83 (197)
T ss_dssp SCCCEEECTTSCCB
T ss_pred CCcCEEEccCCCCC
Confidence 34444444444443
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.51 E-value=2e-05 Score=74.87 Aligned_cols=114 Identities=14% Similarity=0.193 Sum_probs=80.7
Q ss_pred cccCCCccceeecccC-ccCCC----CcccccccccceEEecccccccC----CCchhhhcccccCeeccCCcccccccc
Q 042086 289 ALGSLTELEYLDLSTN-KLGNS----IPETLGNLLKLHYLNLSNNQFRK----GFPVELEKLIQLSELDLSLNILEGKIP 359 (784)
Q Consensus 289 ~l~~l~~L~~L~Ls~n-~l~~~----~~~~l~~l~~L~~L~ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 359 (784)
.+..-+.|++|+|++| .|... +.+.+..-+.|+.|+|++|.|.. .+...+...+.|+.|+|++|.|....-
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3445567888888875 66542 33456667899999999999985 455666778899999999999987544
Q ss_pred ----ccccccccccEEecCCCcc---CCC----CcccccCcccceEEEcCCCCC
Q 042086 360 ----CEICNMESLEKLNLSHNNF---SGL----IPSCFEGMHGLSCIDVSYNEL 402 (784)
Q Consensus 360 ----~~~~~l~~L~~L~L~~N~l---~~~----~p~~~~~l~~L~~l~l~~N~l 402 (784)
+.+..-+.|+.|+|++|.. ... +.+.+..-+.|+.|++++|..
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3444557799999987633 322 334455567888888887643
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.20 E-value=0.0016 Score=67.77 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=89.9
Q ss_pred ccHHHHHHHhcCCCC-----ceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc--ee
Q 042086 505 ILYEEIVRATNGFDV-----KYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS--IV 577 (784)
Q Consensus 505 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 577 (784)
++.+++......|.+ .+.|+.|....+|+....+| .+++|..... ...+++..|+.+++.+.... +.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-----~~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-----VEKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-----CCHHHHHHHHHHHHHHHHCCCCCC
Confidence 445566666666765 24466788899999987666 5788987652 12346677888887774222 23
Q ss_pred eEEeE------EecCCceEEEEecccCCCHHH--------------HHhcC----CCC-----CCCCHHHHHH-------
Q 042086 578 KFYGF------CSHPRNSFLVYEYLERGSLAT--------------ILSND----GAI-----EEFNWTVRMN------- 621 (784)
Q Consensus 578 ~l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~-----~~l~~~~~~~------- 621 (784)
+++.. ....+..+++++|++|..+.. .+|.. ... ....|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33321 122356789999999854310 01111 100 0012322110
Q ss_pred -----HHHHHHHHHHHHhhC----CCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 622 -----VIRSVANALSYMHHD----CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 622 -----i~~~i~~~l~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
+...+.+.+++++.. ..++++|+|+.+.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455565532 123789999999999998876668999998763
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.20 E-value=0.0012 Score=69.29 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=74.8
Q ss_pred eeEecccceE-EEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-C-CceeeEEeEEecCCceEEEEeccc
Q 042086 521 YCIGIGGQGS-VYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-H-RSIVKFYGFCSHPRNSFLVYEYLE 597 (784)
Q Consensus 521 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~~ 597 (784)
+.|+.|.... +|+....+|+.+++|...... ..++..|+.+++.+. + -.+.+++.+..+.+ +++||++.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~------~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE------GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT------TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC------CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 3465555444 667765447778887644321 134556777777663 2 23556666643332 78999998
Q ss_pred CCCHHHHHhcC---------------------C--CCCCCCHHHHH--------HH------------HHHHHHHHHHHh
Q 042086 598 RGSLATILSND---------------------G--AIEEFNWTVRM--------NV------------IRSVANALSYMH 634 (784)
Q Consensus 598 ~gsL~~~l~~~---------------------~--~~~~l~~~~~~--------~i------------~~~i~~~l~~LH 634 (784)
+..+.+++... . ....++..... .+ ...+.+.++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 76765544211 0 01112211100 00 011122223331
Q ss_pred h---CCCCCeEEeCCCCCCeeecCC----CceEEecccccccc
Q 042086 635 H---DCFPPIVHRDISSKNVLLCLD----YEARVSDFGIAKFL 670 (784)
Q Consensus 635 ~---~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfG~a~~~ 670 (784)
. ...+.++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1 123478999999999999875 67899999988753
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.19 E-value=0.0013 Score=67.96 Aligned_cols=139 Identities=15% Similarity=0.095 Sum_probs=76.2
Q ss_pred ceeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCce-eeEEeEEecCCceEEEEecc-c
Q 042086 520 KYCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI-VKFYGFCSHPRNSFLVYEYL-E 597 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 597 (784)
.+.|+.|....+|+. +.+++|+...... ...+...|+.+++.+....+ .+++++. ++.-++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~----~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE----EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc----ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 678999999999999 5688888764211 11234578888877742223 4555543 34457899999 5
Q ss_pred CCCHHH------------------HHhcCCC-C-CCCCH-HHHHHHHH--------------HHHHHH----HHHhh-CC
Q 042086 598 RGSLAT------------------ILSNDGA-I-EEFNW-TVRMNVIR--------------SVANAL----SYMHH-DC 637 (784)
Q Consensus 598 ~gsL~~------------------~l~~~~~-~-~~l~~-~~~~~i~~--------------~i~~~l----~~LH~-~~ 637 (784)
+.++.. .+|.... . ..++. .....+.. .+.+.+ +.+.. ..
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 543321 0111111 0 01111 11111100 011111 11211 11
Q ss_pred CCCeEEeCCCCCCeeecCCCceEEecccccccc
Q 042086 638 FPPIVHRDISSKNVLLCLDYEARVSDFGIAKFL 670 (784)
Q Consensus 638 ~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 670 (784)
.+.++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 235799999999999 56677899999988753
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.15 E-value=0.0031 Score=65.81 Aligned_cols=142 Identities=12% Similarity=0.122 Sum_probs=82.8
Q ss_pred eeEecccceEEEEEEEcCCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCC--ceeeEEeE-----EecCCceEEEE
Q 042086 521 YCIGIGGQGSVYKAKLTSGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHR--SIVKFYGF-----CSHPRNSFLVY 593 (784)
Q Consensus 521 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~ 593 (784)
+.++ |....||+....+|+.+++|...... ...+.+..|+.+++.+... .+.+++.. ....+..++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~----~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC----CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence 4576 88889999887778789999986421 1356777888888877422 23444443 12245567899
Q ss_pred ecccCCCHH-----HH---------Hhc----CCC--CCCCCHHHH----HHH---------------HHHHHHHHHHHh
Q 042086 594 EYLERGSLA-----TI---------LSN----DGA--IEEFNWTVR----MNV---------------IRSVANALSYMH 634 (784)
Q Consensus 594 e~~~~gsL~-----~~---------l~~----~~~--~~~l~~~~~----~~i---------------~~~i~~~l~~LH 634 (784)
||++|..+. .. +|. ... ....++... ..+ ...+.+.++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999875321 11 111 110 112222211 001 111112233332
Q ss_pred hC----CCCCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 635 HD----CFPPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 635 ~~----~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
.. ..+.++|||+++.||+++ + .+.++||+.+..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 21 223578999999999999 4 899999988764
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.09 E-value=0.00056 Score=60.60 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=46.3
Q ss_pred eeccCCcccc-ccccccccccccccEEecCCCccCCCCcccccCcccceEEEcCCCCCcccCC
Q 042086 346 ELDLSLNILE-GKIPCEICNMESLEKLNLSHNNFSGLIPSCFEGMHGLSCIDVSYNELRGPIP 407 (784)
Q Consensus 346 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 407 (784)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.+.+-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5666666665 34554332 468899999999998888889999999999999999988655
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.0024 Score=69.42 Aligned_cols=71 Identities=20% Similarity=0.220 Sum_probs=49.8
Q ss_pred ceeEecccceEEEEEEEcC--------CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc-eeeEEeEEecCCceE
Q 042086 520 KYCIGIGGQGSVYKAKLTS--------GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS-IVKFYGFCSHPRNSF 590 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~ 590 (784)
.+.|+.|....+|++...+ ++.+++|+.... ...+.+..|..+++.+...+ ..++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 3568889899999998753 578999987431 11256778999998884333 3567766542 3
Q ss_pred EEEecccCC
Q 042086 591 LVYEYLERG 599 (784)
Q Consensus 591 lv~e~~~~g 599 (784)
+|+||++|.
T Consensus 149 ~v~e~l~G~ 157 (429)
T 1nw1_A 149 RLEEYIPSR 157 (429)
T ss_dssp EEECCCCEE
T ss_pred EEEEEeCCc
Confidence 899999864
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.68 E-value=0.0033 Score=66.70 Aligned_cols=141 Identities=14% Similarity=0.219 Sum_probs=83.1
Q ss_pred eeEecccceEEEEEEEc--------CCCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEecCCceEE
Q 042086 521 YCIGIGGQGSVYKAKLT--------SGEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSHPRNSFL 591 (784)
Q Consensus 521 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 591 (784)
+.+..|....+|+.... +++.|++|+.... ......+.+|..+++.+. +.-..++++++.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 56777888999999864 3578999986331 223566779999998884 3333566766643 28
Q ss_pred EEecccCCCHHH--------------H---HhcCCC--CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 042086 592 VYEYLERGSLAT--------------I---LSNDGA--IEEFN--WTVRMNVIRSVAN-------------------ALS 631 (784)
Q Consensus 592 v~e~~~~gsL~~--------------~---l~~~~~--~~~l~--~~~~~~i~~~i~~-------------------~l~ 631 (784)
|+||++|.++.. . +|.... ..... |....++..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999854421 1 121111 11122 3444444433321 223
Q ss_pred H----HhhC-CCCCeEEeCCCCCCeeecCC----CceEEeccccccc
Q 042086 632 Y----MHHD-CFPPIVHRDISSKNVLLCLD----YEARVSDFGIAKF 669 (784)
Q Consensus 632 ~----LH~~-~~~~ivH~Dlk~~Nill~~~----~~~kl~DfG~a~~ 669 (784)
. |... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3 3221 12357899999999999877 7899999998864
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.59 E-value=0.0068 Score=66.15 Aligned_cols=73 Identities=18% Similarity=0.066 Sum_probs=47.7
Q ss_pred ceeEecccceEEEEEEEcC-CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCce-eeEEeEEecCCceEEEEeccc
Q 042086 520 KYCIGIGGQGSVYKAKLTS-GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRSI-VKFYGFCSHPRNSFLVYEYLE 597 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~ 597 (784)
.+.|+.|-...+|+....+ ++.+++|+..... ...-+-.+|..+++.+...++ .++++++. + .+|+||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~----~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT----DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C----CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh----hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4578889999999998775 5788899875421 111123588999988854444 56777663 2 35999998
Q ss_pred CCC
Q 042086 598 RGS 600 (784)
Q Consensus 598 ~gs 600 (784)
+.+
T Consensus 185 G~~ 187 (458)
T 2qg7_A 185 GYA 187 (458)
T ss_dssp SEE
T ss_pred Ccc
Confidence 743
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.38 E-value=0.012 Score=55.93 Aligned_cols=103 Identities=18% Similarity=0.128 Sum_probs=66.8
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEeccccccccCCCCCccc
Q 042086 599 GSLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAKFLKPDSSNCT 678 (784)
Q Consensus 599 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 678 (784)
-+|.+.|+..+. ++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 389999986653 79999999999999999887622111 1 1222346889999999888764 1110
Q ss_pred ccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 042086 679 ELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHP 719 (784)
Q Consensus 679 ~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p 719 (784)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122467888764 3456788999999999999965444
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.37 E-value=0.0035 Score=66.70 Aligned_cols=73 Identities=8% Similarity=0.031 Sum_probs=44.1
Q ss_pred ceeEecccceEEEEEEEcC---------CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccCCCc-eeeEEeEEecCCce
Q 042086 520 KYCIGIGGQGSVYKAKLTS---------GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELRHRS-IVKFYGFCSHPRNS 589 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~ 589 (784)
.+.++.|....+|+....+ ++.+++|+...... ...+...|..+++.+...+ +.++++.. . -
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~ 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--G 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ceecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence 3567788888999998654 26888888654211 1113467888888774333 34666554 2 3
Q ss_pred EEEEecccCCC
Q 042086 590 FLVYEYLERGS 600 (784)
Q Consensus 590 ~lv~e~~~~gs 600 (784)
++||||++|.+
T Consensus 110 ~~v~e~i~G~~ 120 (369)
T 3c5i_A 110 GRIEEWLYGDP 120 (369)
T ss_dssp EEEEECCCSEE
T ss_pred cEEEEEecCCc
Confidence 68999998753
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.33 E-value=0.0049 Score=54.44 Aligned_cols=7 Identities=29% Similarity=0.055 Sum_probs=2.5
Q ss_pred EccCCcc
Q 042086 107 YLYRNSL 113 (784)
Q Consensus 107 ~L~~n~l 113 (784)
+.+++.+
T Consensus 14 ~Cs~~~L 20 (130)
T 3rfe_A 14 DCGRRGL 20 (130)
T ss_dssp ECCSSCC
T ss_pred EeCCCCC
Confidence 3333333
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.12 E-value=0.014 Score=61.05 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=27.6
Q ss_pred CCeEEeCCCCCCeeecCCCceEEeccccccc
Q 042086 639 PPIVHRDISSKNVLLCLDYEARVSDFGIAKF 669 (784)
Q Consensus 639 ~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 669 (784)
..++|+|+.+.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3689999999999999888899999988764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.87 E-value=0.026 Score=60.15 Aligned_cols=145 Identities=16% Similarity=0.185 Sum_probs=83.2
Q ss_pred eeEecccceEEEEEEEcC--------CCEEEEEEcCCCCCC--------CCCC-------hhhHHHHHHHHhccC-CCce
Q 042086 521 YCIGIGGQGSVYKAKLTS--------GEILAVKKFHSLWPC--------EMVP-------QPEFVNEIKTLTELR-HRSI 576 (784)
Q Consensus 521 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~--------~~~~-------~~~~~~E~~~l~~l~-h~ni 576 (784)
+.|..|-...+|+....+ ++.|.+++....... .... .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 457778888999988653 368888886542110 0011 122345888888884 4445
Q ss_pred eeEEeEEecCCceEEEEecccCCCHHH--H---------------HhcCC--CCCCCC--HHHHHHHHHHHH--------
Q 042086 577 VKFYGFCSHPRNSFLVYEYLERGSLAT--I---------------LSNDG--AIEEFN--WTVRMNVIRSVA-------- 627 (784)
Q Consensus 577 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~i~-------- 627 (784)
.++++++.. .+|+||+++-+|.. + +|... ...... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677777643 28999999643311 0 12111 111223 223333333221
Q ss_pred --------------HHH----HHHhhC-CCCCeEEeCCCCCCeeecCC------CceEEeccccccc
Q 042086 628 --------------NAL----SYMHHD-CFPPIVHRDISSKNVLLCLD------YEARVSDFGIAKF 669 (784)
Q Consensus 628 --------------~~l----~~LH~~-~~~~ivH~Dlk~~Nill~~~------~~~kl~DfG~a~~ 669 (784)
.-+ .++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223322 12357899999999999887 7899999998763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.77 E-value=0.12 Score=55.39 Aligned_cols=73 Identities=7% Similarity=-0.031 Sum_probs=48.3
Q ss_pred ceeEecccceEEEEEEEcC--------CCEEEEEEcCCCCCCCCCChhhHHHHHHHHhccC-CCceeeEEeEEecCCceE
Q 042086 520 KYCIGIGGQGSVYKAKLTS--------GEILAVKKFHSLWPCEMVPQPEFVNEIKTLTELR-HRSIVKFYGFCSHPRNSF 590 (784)
Q Consensus 520 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 590 (784)
.+.+..|-...+|+....+ ++.|++|+..... ...-+-.+|..+++.+. +.-..++++.+. -+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV----GKFYDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 3567778889999998763 6789999864421 11223457888888874 333445565432 37
Q ss_pred EEEecccCCC
Q 042086 591 LVYEYLERGS 600 (784)
Q Consensus 591 lv~e~~~~gs 600 (784)
.|+||++|.+
T Consensus 147 ~I~efI~G~~ 156 (424)
T 3mes_A 147 RIEEFIDGEP 156 (424)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEeCCcc
Confidence 8999999865
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.36 E-value=0.13 Score=34.83 Aligned_cols=29 Identities=31% Similarity=0.246 Sum_probs=17.2
Q ss_pred eeehhHHHHHHHHHHHHhhhchhhhccCC
Q 042086 453 IIVFPLLGALSLSVLAMGTFFILRRREGP 481 (784)
Q Consensus 453 ~~~~~~~~~~~l~~~~~~~~~~~rrr~~~ 481 (784)
|++.++.|++++++++++.++++|||+.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 45555666666666666666666665543
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.76 E-value=0.12 Score=35.04 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=16.7
Q ss_pred eeehhHHHHHHHHHHHHhhhchhhhccCC
Q 042086 453 IIVFPLLGALSLSVLAMGTFFILRRREGP 481 (784)
Q Consensus 453 ~~~~~~~~~~~l~~~~~~~~~~~rrr~~~ 481 (784)
++..++.|++++++++...++++|||+.+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 45555555666666665656666655543
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.31 E-value=0.73 Score=49.14 Aligned_cols=29 Identities=24% Similarity=0.415 Sum_probs=24.6
Q ss_pred eEEeCCCCCCeee------cCCCceEEeccccccc
Q 042086 641 IVHRDISSKNVLL------CLDYEARVSDFGIAKF 669 (784)
Q Consensus 641 ivH~Dlk~~Nill------~~~~~~kl~DfG~a~~ 669 (784)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 4799999999999 4456799999998864
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.96 E-value=0.86 Score=43.30 Aligned_cols=116 Identities=9% Similarity=0.115 Sum_probs=82.5
Q ss_pred CCCceeeEEeEEecCCceEEEEecccCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCC
Q 042086 572 RHRSIVKFYGFCSHPRNSFLVYEYLERG-SLATILSNDGAIEEFNWTVRMNVIRSVANALSYMHHDCFPPIVHRDISSKN 650 (784)
Q Consensus 572 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 650 (784)
.||+.+.. .+-.+.+.+.+.|+.-+.+ ++.. ....+...+++++.+|+....+++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-------ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-------IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-------GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-------HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888866 5666667766777654422 2222 23467789999999999988777766 899999999
Q ss_pred eeecCCCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCc
Q 042086 651 VLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDF 722 (784)
Q Consensus 651 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~ 722 (784)
++++.++.+++.=.|+-..+ +|. ..+...=.-.+=+++..+++++..|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l-----------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV-----------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTB-----------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCC-----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999877754332 222 122233345677889999999998863
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=83.80 E-value=0.68 Score=31.26 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=12.8
Q ss_pred eehhHHHHHHHHHHHHhhhchhhhccC
Q 042086 454 IVFPLLGALSLSVLAMGTFFILRRREG 480 (784)
Q Consensus 454 ~~~~~~~~~~l~~~~~~~~~~~rrr~~ 480 (784)
++..++|++++++++++.+++.|||+.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 444555544444444444445555443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.68 E-value=3.9 Score=38.96 Aligned_cols=115 Identities=10% Similarity=0.066 Sum_probs=80.6
Q ss_pred CCCceeeEEeEEecCCceEEEEecccCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEEeCCCCC
Q 042086 572 RHRSIVKFYGFCSHPRNSFLVYEYLERG-SLATILSNDGAIEEFNWTVRMNVIRSVANALS-YMHHDCFPPIVHRDISSK 649 (784)
Q Consensus 572 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~Dlk~~ 649 (784)
.||++ -..+-.+++.+.+.|+.-+++ ++.. ++ ..+...+++++.+|+.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67887 445556777888888766443 4443 32 3567889999999998877 66665 88899999
Q ss_pred CeeecCCCceEEeccccccccCCCCCcccccccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCCc
Q 042086 650 NVLLCLDYEARVSDFGIAKFLKPDSSNCTELVGTFGYIAPELVYTMKVTEKCDVYSFGVLALEVIKGDHPRDF 722 (784)
Q Consensus 650 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslGv~l~elltg~~p~~~ 722 (784)
|++++.++.+++.=.|+-.. ++|.. .+..-=.-++=+++..++.++..|+.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~-----------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES-----------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp GEEECTTCCEEESCCEETTT-----------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred eEEEeCCCcEEEEEcCCccc-----------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999987775433 23322 12122244677788888988888763
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.64 E-value=0.28 Score=53.48 Aligned_cols=63 Identities=6% Similarity=-0.092 Sum_probs=18.0
Q ss_pred CCceeEecccceEEEEEEEcC-CCEEEE------EEcCCCCCCCCCChhhHHHHHHHHhccCCCceeeEEeEEe
Q 042086 518 DVKYCIGIGGQGSVYKAKLTS-GEILAV------KKFHSLWPCEMVPQPEFVNEIKTLTELRHRSIVKFYGFCS 584 (784)
Q Consensus 518 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 584 (784)
.+.+.+| ||.||+|.+.. ..+||| |..+... .+......|.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEE
Confidence 3445566 99999998764 367888 6655422 22333457889999999999999999988764
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=71.68 E-value=1.5 Score=29.30 Aligned_cols=25 Identities=44% Similarity=0.442 Sum_probs=10.9
Q ss_pred eeehhHHHHHHHHHHHHhhhchhhh
Q 042086 453 IIVFPLLGALSLSVLAMGTFFILRR 477 (784)
Q Consensus 453 ~~~~~~~~~~~l~~~~~~~~~~~rr 477 (784)
+++.+++|+++++.+++++++++||
T Consensus 15 I~~~vv~Gv~ll~~iv~~~~~~~rR 39 (41)
T 2k9y_A 15 VIGGVAVGVVLLLVLAGVGFFIHRR 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred EEeehhHHHHHHHHHHHHheeEeee
Confidence 3444455544433234444444443
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=68.91 E-value=2.2 Score=30.11 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=14.8
Q ss_pred cceeeeehhHHHHHHHHHHHHhhh
Q 042086 449 RKWFIIVFPLLGALSLSVLAMGTF 472 (784)
Q Consensus 449 ~~~~~~~~~~~~~~~l~~~~~~~~ 472 (784)
..|++++.+++|.+++++++.+.+
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666666666666655554
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=64.71 E-value=18 Score=29.53 Aligned_cols=46 Identities=15% Similarity=0.050 Sum_probs=26.4
Q ss_pred cccccCCCCcCCCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccC
Q 042086 88 KLNGSIPFSFGNLTNLAIMYLYRNSLSASIPPVIGNLKFLYHLDLSE 134 (784)
Q Consensus 88 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 134 (784)
.++.+....|.++++|+.+.|-.+ ++.+-..+|.+|.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 444455556666666666666653 3334445666666666666654
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=64.59 E-value=3.7 Score=29.12 Aligned_cols=24 Identities=29% Similarity=0.598 Sum_probs=14.8
Q ss_pred cceeeeehhHHHHHHHHHHHHhhh
Q 042086 449 RKWFIIVFPLLGALSLSVLAMGTF 472 (784)
Q Consensus 449 ~~~~~~~~~~~~~~~l~~~~~~~~ 472 (784)
..|++++.+++|.+++++++.+.+
T Consensus 11 p~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666655554
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=62.03 E-value=3.3 Score=26.34 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=10.9
Q ss_pred eehhHHHHHHHHHHHHhhhchhhhc
Q 042086 454 IVFPLLGALSLSVLAMGTFFILRRR 478 (784)
Q Consensus 454 ~~~~~~~~~~l~~~~~~~~~~~rrr 478 (784)
++..++|.++++++..++.++.|||
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 3344555334344444444444444
No 459
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=60.72 E-value=4.6 Score=26.42 Aligned_cols=23 Identities=30% Similarity=0.225 Sum_probs=9.0
Q ss_pred ehhHHHHHHH-HHHHHhhhchhhh
Q 042086 455 VFPLLGALSL-SVLAMGTFFILRR 477 (784)
Q Consensus 455 ~~~~~~~~~l-~~~~~~~~~~~rr 477 (784)
..+++++++. ++++..++|++||
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeehHHHHHHHHHHHHHHHHeec
Confidence 3344444333 3333334444443
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=56.55 E-value=5.6 Score=26.62 Aligned_cols=24 Identities=29% Similarity=0.598 Sum_probs=14.1
Q ss_pred cceeeeehhHHHHHHHHHHHHhhh
Q 042086 449 RKWFIIVFPLLGALSLSVLAMGTF 472 (784)
Q Consensus 449 ~~~~~~~~~~~~~~~l~~~~~~~~ 472 (784)
..|++++.+++|.+++++++.+.+
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666666666665555544
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=53.98 E-value=51 Score=36.55 Aligned_cols=47 Identities=23% Similarity=0.191 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHH--HHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 615 NWTVRMNVIRSVA--NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 615 ~~~~~~~i~~~i~--~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
.+..+..++..+| ..+.|+=.- ||=.++|||++.+|++.=+|||.+-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3566667776665 345566433 6778999999999999999999874
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.13 E-value=52 Score=26.70 Aligned_cols=45 Identities=11% Similarity=0.111 Sum_probs=23.3
Q ss_pred ccccCCCCCCCCCCCCEEEccCCccCCCCCcCccCCCcCcEEeecC
Q 042086 113 LSASIPPVIGNLKFLYHLDLSENQLSGSIPPTLGNLSNLAVLHLYG 158 (784)
Q Consensus 113 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 158 (784)
++.+-..+|.+|.+|+.+.|-.+ ++.....+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455666666666666543 3323444555555555555544
No 463
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=40.91 E-value=28 Score=25.82 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=17.7
Q ss_pred ehhHHHHHHHHHHHHhhhchhhhccCCCCCc
Q 042086 455 VFPLLGALSLSVLAMGTFFILRRREGPSSEN 485 (784)
Q Consensus 455 ~~~~~~~~~l~~~~~~~~~~~rrr~~~~~~~ 485 (784)
+.+++++.++.+++.++|++.|-.+-..++.
T Consensus 18 ~viliavaalg~li~gcwcylrlqri~qsed 48 (90)
T 1zza_A 18 IVILIAIAALGALILGCWCYLRLQRISQSED 48 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCSSCSSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3344445556666777777766655444433
No 464
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=28.09 E-value=81 Score=35.57 Aligned_cols=45 Identities=27% Similarity=0.250 Sum_probs=33.6
Q ss_pred HHHHHHHHHHH--HHHHHHhhCCCCCeEEeCCCCCCeeecCCCceEEecccccc
Q 042086 617 TVRMNVIRSVA--NALSYMHHDCFPPIVHRDISSKNVLLCLDYEARVSDFGIAK 668 (784)
Q Consensus 617 ~~~~~i~~~i~--~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 668 (784)
..+..++.++| ..+.|+=.- ||=.++|||++.+|++.-+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 45566666655 345555432 7888999999999999999999874
Done!