Query 042087
Match_columns 118
No_of_seqs 15 out of 17
Neff 1.6
Searched_HMMs 29240
Date Mon Mar 25 04:06:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042087.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042087hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kr9_A SAM-dependent methyltra 94.6 0.0081 2.8E-07 44.9 0.8 48 1-75 42-89 (225)
2 3gnl_A Uncharacterized protein 94.5 0.0089 3E-07 45.5 0.8 48 1-75 48-95 (244)
3 3lec_A NADB-rossmann superfami 94.2 0.012 4E-07 44.4 0.8 48 1-75 48-95 (230)
4 1o9g_A RRNA methyltransferase; 93.4 0.027 9.1E-07 39.3 1.4 21 1-21 80-100 (250)
5 3p9n_A Possible methyltransfer 93.4 0.049 1.7E-06 36.1 2.6 52 1-79 70-122 (189)
6 2fpo_A Methylase YHHF; structu 93.0 0.08 2.7E-06 36.2 3.3 52 1-79 80-131 (202)
7 3k6r_A Putative transferase PH 92.9 0.028 9.4E-07 43.0 0.9 25 1-25 151-175 (278)
8 2okc_A Type I restriction enzy 92.4 0.035 1.2E-06 43.3 0.9 24 1-24 211-234 (445)
9 3ldu_A Putative methylase; str 92.3 0.045 1.5E-06 42.7 1.5 52 1-80 260-311 (385)
10 1nv8_A HEMK protein; class I a 92.2 0.049 1.7E-06 40.2 1.4 51 1-80 149-202 (284)
11 3lpm_A Putative methyltransfer 91.7 0.079 2.7E-06 37.3 2.0 53 1-79 75-128 (259)
12 2frn_A Hypothetical protein PH 91.5 0.059 2E-06 39.1 1.2 23 1-23 151-173 (278)
13 2fhp_A Methylase, putative; al 91.3 0.074 2.5E-06 34.2 1.4 53 1-79 70-125 (187)
14 2ift_A Putative methylase HI07 90.6 0.16 5.5E-06 34.7 2.6 54 1-79 79-134 (201)
15 2esr_A Methyltransferase; stru 90.6 0.083 2.8E-06 34.2 1.1 53 1-79 57-109 (177)
16 2f8l_A Hypothetical protein LM 90.6 0.078 2.7E-06 39.4 1.1 23 1-23 162-184 (344)
17 2h00_A Methyltransferase 10 do 90.0 0.099 3.4E-06 36.2 1.2 23 1-23 92-114 (254)
18 2ar0_A M.ecoki, type I restric 89.9 0.076 2.6E-06 43.4 0.6 25 1-25 214-238 (541)
19 3khk_A Type I restriction-modi 89.9 0.12 4.3E-06 42.5 1.9 25 1-25 286-310 (544)
20 2b3t_A Protein methyltransfera 89.7 0.26 9E-06 35.0 3.2 51 1-80 136-186 (276)
21 3v97_A Ribosomal RNA large sub 89.4 0.13 4.4E-06 43.5 1.6 53 1-79 259-312 (703)
22 3axs_A Probable N(2),N(2)-dime 89.3 0.12 4E-06 41.4 1.3 50 1-75 80-130 (392)
23 3eey_A Putative rRNA methylase 89.2 0.21 7E-06 32.9 2.2 54 1-80 50-103 (197)
24 2igt_A SAM dependent methyltra 89.2 0.12 4E-06 39.5 1.1 54 1-79 178-234 (332)
25 3v97_A Ribosomal RNA large sub 88.8 0.096 3.3E-06 44.3 0.5 54 1-79 565-618 (703)
26 3lkd_A Type I restriction-modi 88.7 0.15 5.1E-06 42.2 1.5 24 1-24 251-274 (542)
27 2b78_A Hypothetical protein SM 88.5 0.18 6.3E-06 38.8 1.8 51 1-76 238-291 (385)
28 1ws6_A Methyltransferase; stru 88.1 0.17 5.8E-06 31.9 1.2 52 1-80 66-120 (171)
29 3ldg_A Putative uncharacterize 88.0 0.16 5.4E-06 40.0 1.2 51 1-79 259-309 (384)
30 3k0b_A Predicted N6-adenine-sp 87.9 0.16 5.4E-06 39.9 1.1 51 1-79 266-316 (393)
31 3a27_A TYW2, uncharacterized p 87.6 0.19 6.6E-06 36.4 1.4 24 1-24 146-169 (272)
32 4dzr_A Protein-(glutamine-N5) 87.3 0.27 9.4E-06 31.8 1.8 54 1-82 57-113 (215)
33 2yx1_A Hypothetical protein MJ 87.1 0.18 6.1E-06 37.9 1.0 25 1-25 219-243 (336)
34 3bt7_A TRNA (uracil-5-)-methyl 86.8 0.15 5E-06 38.8 0.4 23 1-23 238-260 (369)
35 2ozv_A Hypothetical protein AT 86.7 0.1 3.4E-06 37.5 -0.5 57 1-80 63-125 (260)
36 3evz_A Methyltransferase; NYSG 86.7 0.19 6.6E-06 33.8 0.9 22 1-22 82-103 (230)
37 3c0k_A UPF0064 protein YCCW; P 86.7 0.17 5.7E-06 38.6 0.6 23 1-23 246-268 (396)
38 3ocj_A Putative exported prote 86.4 0.49 1.7E-05 33.9 2.9 61 1-89 146-206 (305)
39 3q87_B N6 adenine specific DNA 85.7 0.29 1E-05 32.5 1.4 32 52-85 62-93 (170)
40 3gdh_A Trimethylguanosine synt 85.3 0.29 1E-05 33.3 1.2 49 1-77 103-151 (241)
41 3mti_A RRNA methylase; SAM-dep 84.8 0.78 2.7E-05 29.8 3.1 21 1-21 47-67 (185)
42 2f46_A Hypothetical protein; s 84.1 0.26 8.8E-06 33.2 0.5 57 15-74 90-147 (156)
43 1dus_A MJ0882; hypothetical pr 83.6 0.89 3E-05 28.8 2.9 20 1-20 77-96 (194)
44 3jwg_A HEN1, methyltransferase 83.6 0.37 1.3E-05 32.1 1.2 23 1-23 56-78 (219)
45 2yxd_A Probable cobalt-precorr 83.5 0.82 2.8E-05 28.8 2.7 20 1-20 60-79 (183)
46 3tm4_A TRNA (guanine N2-)-meth 83.2 0.46 1.6E-05 36.2 1.7 52 1-79 244-295 (373)
47 1uwv_A 23S rRNA (uracil-5-)-me 82.8 0.38 1.3E-05 37.5 1.1 23 1-23 311-333 (433)
48 3adn_A Spermidine synthase; am 82.6 0.43 1.5E-05 35.8 1.3 56 1-79 110-166 (294)
49 2h1r_A Dimethyladenosine trans 82.1 0.49 1.7E-05 35.1 1.4 49 1-79 67-115 (299)
50 2as0_A Hypothetical protein PH 81.2 0.45 1.5E-05 36.1 0.9 23 1-23 243-265 (396)
51 3u81_A Catechol O-methyltransf 81.0 0.58 2E-05 31.8 1.4 23 1-23 86-108 (221)
52 1wy7_A Hypothetical protein PH 80.9 0.53 1.8E-05 31.1 1.1 21 1-21 75-95 (207)
53 2nxc_A L11 mtase, ribosomal pr 80.8 0.84 2.9E-05 32.5 2.2 23 1-23 145-167 (254)
54 3sm3_A SAM-dependent methyltra 80.2 0.97 3.3E-05 29.7 2.2 64 1-87 55-118 (235)
55 2dul_A N(2),N(2)-dimethylguano 79.7 0.49 1.7E-05 37.0 0.7 63 1-75 74-136 (378)
56 3ntv_A MW1564 protein; rossman 79.6 0.57 2E-05 32.5 1.0 18 1-18 98-115 (232)
57 2ih2_A Modification methylase 79.6 0.43 1.5E-05 35.3 0.4 46 1-84 67-112 (421)
58 1af7_A Chemotaxis receptor met 78.4 0.49 1.7E-05 35.6 0.4 71 1-78 140-220 (274)
59 3tr6_A O-methyltransferase; ce 78.0 0.65 2.2E-05 31.1 0.8 18 1-18 92-109 (225)
60 3lcc_A Putative methyl chlorid 77.9 1.4 4.9E-05 29.7 2.5 48 1-76 91-138 (235)
61 3jwh_A HEN1; methyltransferase 76.7 0.72 2.5E-05 30.8 0.8 21 1-21 56-76 (217)
62 2qm3_A Predicted methyltransfe 76.3 1.1 3.7E-05 33.9 1.7 23 1-23 198-220 (373)
63 2r6z_A UPF0341 protein in RSP 76.3 0.33 1.1E-05 35.8 -1.1 49 1-75 108-166 (258)
64 1wxx_A TT1595, hypothetical pr 75.7 0.64 2.2E-05 35.3 0.3 23 1-23 234-256 (382)
65 3tma_A Methyltransferase; thum 75.5 1.1 3.6E-05 33.3 1.5 23 1-23 231-253 (354)
66 3m70_A Tellurite resistance pr 74.4 2.2 7.5E-05 29.8 2.8 18 1-18 145-162 (286)
67 1yzh_A TRNA (guanine-N(7)-)-me 74.1 1.2 3.9E-05 30.1 1.2 21 1-21 68-88 (214)
68 2vdv_E TRNA (guanine-N(7)-)-me 73.9 1.1 3.9E-05 31.1 1.2 21 1-21 76-96 (246)
69 2pt6_A Spermidine synthase; tr 73.6 1 3.4E-05 34.0 0.9 55 1-79 143-198 (321)
70 3njr_A Precorrin-6Y methylase; 72.9 1.2 4.1E-05 30.6 1.1 23 1-23 80-102 (204)
71 2jjq_A Uncharacterized RNA met 72.8 1.1 3.7E-05 35.5 1.0 23 1-23 315-337 (425)
72 1zzp_A P150, C-ABL, proto-onco 72.2 0.65 2.2E-05 34.5 -0.4 27 59-92 60-88 (130)
73 3mb5_A SAM-dependent methyltra 71.4 1.8 6.1E-05 29.6 1.7 51 1-79 121-171 (255)
74 3s1s_A Restriction endonucleas 71.1 1.7 5.9E-05 39.6 2.0 61 1-84 351-413 (878)
75 3g89_A Ribosomal RNA small sub 70.7 1.4 4.7E-05 31.7 1.0 23 1-23 107-129 (249)
76 3c3p_A Methyltransferase; NP_9 70.4 1.5 5.2E-05 29.3 1.2 19 1-19 84-102 (210)
77 4dcm_A Ribosomal RNA large sub 70.4 1.6 5.5E-05 33.7 1.4 53 1-79 249-301 (375)
78 2b25_A Hypothetical protein; s 69.5 1.2 4.2E-05 32.5 0.6 19 1-19 133-151 (336)
79 1inl_A Spermidine synthase; be 69.2 1.5 5E-05 32.4 1.0 54 1-79 117-172 (296)
80 3tfw_A Putative O-methyltransf 68.5 1.4 5E-05 30.9 0.8 18 1-18 91-108 (248)
81 3ufb_A Type I restriction-modi 68.5 1.2 4E-05 36.5 0.3 24 1-24 257-280 (530)
82 3hm2_A Precorrin-6Y C5,15-meth 68.2 1.9 6.6E-05 27.2 1.2 23 1-23 52-74 (178)
83 2yvl_A TRMI protein, hypotheti 67.7 3.7 0.00013 27.5 2.6 52 1-79 116-167 (248)
84 3ofk_A Nodulation protein S; N 67.4 3.2 0.00011 27.3 2.3 17 1-17 76-92 (216)
85 3hem_A Cyclopropane-fatty-acyl 66.6 3.8 0.00013 29.0 2.6 46 1-76 98-143 (302)
86 1wzn_A SAM-dependent methyltra 66.2 4.5 0.00015 27.3 2.8 18 1-18 66-83 (252)
87 2kw5_A SLR1183 protein; struct 66.1 5.2 0.00018 26.0 3.1 18 1-18 54-71 (202)
88 3e05_A Precorrin-6Y C5,15-meth 65.6 2.2 7.4E-05 28.3 1.1 22 1-22 67-88 (204)
89 3dmg_A Probable ribosomal RNA 65.3 1.9 6.4E-05 33.6 0.9 23 1-23 258-280 (381)
90 1xdz_A Methyltransferase GIDB; 65.1 2.1 7.4E-05 29.5 1.1 23 1-23 97-119 (240)
91 1i9g_A Hypothetical protein RV 64.8 5 0.00017 27.7 2.9 18 1-18 127-144 (280)
92 1l3i_A Precorrin-6Y methyltran 64.5 2.4 8.2E-05 26.7 1.1 20 1-20 58-77 (192)
93 3dr5_A Putative O-methyltransf 64.4 3 0.0001 29.3 1.7 18 1-18 84-101 (221)
94 3r3h_A O-methyltransferase, SA 63.6 1.6 5.6E-05 31.0 0.2 21 1-21 88-108 (242)
95 2xvm_A Tellurite resistance pr 63.0 5 0.00017 25.6 2.5 18 1-18 57-74 (199)
96 3ll7_A Putative methyltransfer 62.9 1.4 4.8E-05 35.7 -0.2 21 1-21 118-138 (410)
97 1iy9_A Spermidine synthase; ro 62.4 1.7 5.9E-05 31.7 0.2 56 1-80 102-158 (275)
98 1zq9_A Probable dimethyladenos 61.6 2.2 7.5E-05 31.2 0.6 50 1-79 53-102 (285)
99 2bm8_A Cephalosporin hydroxyla 61.4 1.9 6.4E-05 30.5 0.2 15 1-15 112-126 (236)
100 2gpy_A O-methyltransferase; st 61.1 2.5 8.7E-05 28.6 0.8 22 1-22 81-102 (233)
101 4dmg_A Putative uncharacterize 59.8 3 0.0001 32.7 1.2 24 1-24 239-262 (393)
102 3q7e_A Protein arginine N-meth 59.7 5.8 0.0002 29.7 2.7 22 1-23 92-113 (349)
103 3dh0_A SAM dependent methyltra 59.5 6.6 0.00022 25.8 2.6 22 1-22 65-86 (219)
104 3i9f_A Putative type 11 methyl 59.5 7.2 0.00025 24.6 2.7 17 1-17 42-58 (170)
105 1mjf_A Spermidine synthase; sp 59.5 1.6 5.4E-05 31.8 -0.5 61 1-79 101-161 (281)
106 3dlc_A Putative S-adenosyl-L-m 59.2 6.9 0.00024 25.1 2.6 20 1-20 69-88 (219)
107 3grz_A L11 mtase, ribosomal pr 59.1 3.1 0.00011 27.4 1.0 23 1-23 86-108 (205)
108 3lbf_A Protein-L-isoaspartate 59.1 3.1 0.00011 27.4 1.0 18 1-18 102-119 (210)
109 4htf_A S-adenosylmethionine-de 58.9 7.8 0.00027 26.9 3.1 18 1-18 93-110 (285)
110 3g2m_A PCZA361.24; SAM-depende 58.7 2.6 9.1E-05 29.7 0.6 49 1-75 107-155 (299)
111 2o07_A Spermidine synthase; st 58.7 2.6 9.1E-05 31.5 0.6 54 1-79 122-177 (304)
112 3nme_A Ptpkis1 protein, SEX4 g 58.5 4.4 0.00015 30.5 1.9 66 22-107 101-169 (294)
113 1y8c_A S-adenosylmethionine-de 58.3 9.2 0.00031 25.1 3.2 18 1-18 62-79 (246)
114 2oyr_A UPF0341 protein YHIQ; a 57.3 1.5 5.3E-05 32.8 -0.9 26 50-75 144-169 (258)
115 3fut_A Dimethyladenosine trans 56.8 4.8 0.00016 30.2 1.8 42 51-94 91-132 (271)
116 1sui_A Caffeoyl-COA O-methyltr 56.3 3.5 0.00012 29.3 0.9 19 1-19 107-125 (247)
117 3c3y_A Pfomt, O-methyltransfer 55.8 2.7 9.1E-05 29.4 0.2 18 1-18 98-115 (237)
118 1o54_A SAM-dependent O-methylt 55.4 5.8 0.0002 27.9 1.9 50 1-78 140-189 (277)
119 3pfg_A N-methyltransferase; N, 54.9 3 0.0001 28.6 0.3 15 1-15 75-89 (263)
120 3cgg_A SAM-dependent methyltra 54.7 5.4 0.00018 25.1 1.5 17 1-17 71-87 (195)
121 1nkv_A Hypothetical protein YJ 54.3 7.6 0.00026 26.1 2.3 19 1-19 62-80 (256)
122 1yub_A Ermam, rRNA methyltrans 53.9 6.4 0.00022 27.5 1.9 29 51-80 75-103 (245)
123 3e23_A Uncharacterized protein 53.8 7.2 0.00024 25.7 2.1 18 1-18 68-85 (211)
124 2b2c_A Spermidine synthase; be 53.7 4.9 0.00017 30.4 1.4 55 1-79 135-190 (314)
125 3gru_A Dimethyladenosine trans 52.7 5.9 0.0002 30.1 1.7 50 1-80 75-124 (295)
126 3mgg_A Methyltransferase; NYSG 52.6 12 0.00041 25.6 3.1 19 1-19 64-82 (276)
127 2avd_A Catechol-O-methyltransf 52.4 2.9 0.0001 27.9 -0.0 19 1-19 97-115 (229)
128 1sur_A PAPS reductase; assimil 52.4 2.9 0.0001 29.0 -0.0 26 54-79 183-215 (215)
129 2ipx_A RRNA 2'-O-methyltransfe 52.1 9.3 0.00032 25.9 2.5 13 1-13 105-117 (233)
130 1yb2_A Hypothetical protein TA 51.0 5.6 0.00019 28.1 1.3 19 1-19 138-156 (275)
131 3b3j_A Histone-arginine methyl 50.0 3.9 0.00013 32.9 0.3 22 1-23 184-205 (480)
132 1xj5_A Spermidine synthase 1; 48.9 4.6 0.00016 30.9 0.6 52 1-76 147-200 (334)
133 4fsd_A Arsenic methyltransfera 47.7 13 0.00045 27.9 2.9 21 1-21 111-131 (383)
134 1g8a_A Fibrillarin-like PRE-rR 47.6 10 0.00035 25.4 2.1 18 1-18 101-118 (227)
135 1uir_A Polyamine aminopropyltr 47.4 4.3 0.00015 30.2 0.2 55 1-79 104-160 (314)
136 2pjd_A Ribosomal RNA small sub 47.0 6.9 0.00024 28.9 1.3 23 1-23 223-245 (343)
137 2hnk_A SAM-dependent O-methylt 45.3 5 0.00017 27.5 0.2 18 1-18 88-105 (239)
138 1ne2_A Hypothetical protein TA 45.2 2.8 9.7E-05 27.6 -1.0 18 1-18 77-94 (200)
139 3m33_A Uncharacterized protein 44.2 5.8 0.0002 26.9 0.4 17 1-17 73-89 (226)
140 2p35_A Trans-aconitate 2-methy 43.8 13 0.00044 24.9 2.1 17 1-17 60-76 (259)
141 3f4k_A Putative methyltransfer 43.8 6.8 0.00023 26.4 0.7 19 1-19 72-90 (257)
142 3bwc_A Spermidine synthase; SA 43.4 7.4 0.00025 28.7 0.9 56 1-79 122-178 (304)
143 3bkx_A SAM-dependent methyltra 43.3 35 0.0012 23.1 4.3 17 1-17 71-93 (275)
144 2o8v_A Phosphoadenosine phosph 43.2 6 0.00021 28.7 0.4 30 54-83 184-220 (252)
145 2pwy_A TRNA (adenine-N(1)-)-me 43.0 9.5 0.00032 25.7 1.4 18 1-18 124-141 (258)
146 1zzm_A Putative deoxyribonucle 42.3 23 0.0008 24.3 3.3 34 3-36 99-136 (259)
147 1qam_A ERMC' methyltransferase 42.0 10 0.00034 27.0 1.4 17 1-17 55-71 (244)
148 2i7c_A Spermidine synthase; tr 41.9 5.6 0.00019 29.0 0.1 55 1-79 105-160 (283)
149 3thr_A Glycine N-methyltransfe 40.4 7.1 0.00024 27.0 0.4 19 1-19 82-100 (293)
150 3gjy_A Spermidine synthase; AP 40.4 4.4 0.00015 31.6 -0.7 50 1-77 116-166 (317)
151 3h2b_A SAM-dependent methyltra 40.2 24 0.0008 22.9 2.9 17 1-17 66-82 (203)
152 3fpf_A Mtnas, putative unchara 39.6 9.8 0.00033 29.7 1.1 45 1-75 149-193 (298)
153 3dxy_A TRNA (guanine-N(7)-)-me 39.6 12 0.00042 26.0 1.5 18 1-18 61-78 (218)
154 1ixk_A Methyltransferase; open 39.3 23 0.00078 26.1 3.0 22 1-22 146-167 (315)
155 3gu3_A Methyltransferase; alph 39.0 17 0.0006 25.5 2.3 17 1-17 50-66 (284)
156 3cbg_A O-methyltransferase; cy 38.8 5.6 0.00019 27.5 -0.3 18 1-18 100-117 (232)
157 3uwp_A Histone-lysine N-methyl 38.6 4.2 0.00014 34.2 -1.2 63 1-83 200-264 (438)
158 3bzb_A Uncharacterized protein 38.1 5.5 0.00019 28.6 -0.4 23 1-23 105-128 (281)
159 1ri5_A MRNA capping enzyme; me 37.8 9.3 0.00032 26.1 0.7 18 1-18 90-107 (298)
160 1pjz_A Thiopurine S-methyltran 37.8 3.6 0.00012 27.9 -1.4 17 1-17 47-63 (203)
161 3htx_A HEN1; HEN1, small RNA m 37.5 10 0.00034 35.1 1.0 22 1-22 749-772 (950)
162 3fzg_A 16S rRNA methylase; met 37.1 7.1 0.00024 29.7 -0.0 24 1-24 76-99 (200)
163 1qyr_A KSGA, high level kasuga 37.0 5.4 0.00018 29.3 -0.7 30 51-80 67-100 (252)
164 3ajd_A Putative methyltransfer 36.2 11 0.00037 27.0 0.9 22 1-22 111-132 (274)
165 2gb4_A Thiopurine S-methyltran 35.4 5.7 0.0002 28.7 -0.7 15 1-15 93-107 (252)
166 2y1h_A Putative deoxyribonucle 35.1 56 0.0019 22.6 4.4 35 2-36 106-148 (272)
167 2fyt_A Protein arginine N-meth 34.7 32 0.0011 25.6 3.2 22 1-23 90-111 (340)
168 2qfm_A Spermine synthase; sper 33.9 11 0.00037 30.4 0.6 60 1-80 214-277 (364)
169 3r0q_C Probable protein argini 33.7 41 0.0014 25.4 3.7 21 1-22 89-109 (376)
170 3uzu_A Ribosomal RNA small sub 33.2 14 0.00047 27.6 1.0 17 1-17 71-87 (279)
171 1dl5_A Protein-L-isoaspartate 33.0 17 0.00057 26.5 1.4 21 1-21 103-123 (317)
172 1yix_A Deoxyribonuclease YCFH; 32.6 44 0.0015 22.7 3.4 69 3-94 96-169 (265)
173 3bus_A REBM, methyltransferase 32.6 30 0.001 23.5 2.5 18 1-18 87-104 (273)
174 2fca_A TRNA (guanine-N(7)-)-me 32.5 8.7 0.0003 26.2 -0.2 21 1-21 65-85 (213)
175 2yqz_A Hypothetical protein TT 32.5 25 0.00086 23.4 2.1 18 1-18 64-81 (263)
176 1g6q_1 HnRNP arginine N-methyl 32.4 31 0.001 25.4 2.8 21 1-22 64-84 (328)
177 1cfz_A Hydrogenase 2 maturatio 32.3 13 0.00045 25.8 0.7 38 56-94 96-135 (162)
178 1vl5_A Unknown conserved prote 32.0 30 0.001 23.5 2.5 18 1-18 62-79 (260)
179 3ftd_A Dimethyladenosine trans 31.8 9.8 0.00033 27.6 -0.0 61 1-94 57-117 (249)
180 3m4x_A NOL1/NOP2/SUN family pr 31.7 21 0.00073 28.9 2.0 63 1-90 133-199 (456)
181 1jsx_A Glucose-inhibited divis 31.4 9.8 0.00034 24.8 -0.1 21 1-21 92-112 (207)
182 2yxe_A Protein-L-isoaspartate 30.9 17 0.00057 23.9 1.0 18 1-18 105-122 (215)
183 1jg1_A PIMT;, protein-L-isoasp 30.8 19 0.00064 24.5 1.3 19 1-19 117-135 (235)
184 3s4o_A Protein tyrosine phosph 30.4 25 0.00084 22.3 1.7 14 26-39 108-121 (167)
185 3g07_A 7SK snRNA methylphospha 29.8 6.3 0.00022 28.3 -1.3 23 1-23 73-95 (292)
186 2nt2_A Protein phosphatase sli 29.8 21 0.00072 22.8 1.3 60 19-92 73-135 (145)
187 1zzw_A Dual specificity protei 29.5 21 0.00073 22.8 1.3 60 19-92 75-137 (149)
188 2a14_A Indolethylamine N-methy 28.9 7.4 0.00025 27.3 -1.0 17 1-17 81-97 (263)
189 2k4m_A TR8_protein, UPF0146 pr 28.8 12 0.00041 27.7 0.1 12 1-12 62-73 (153)
190 2goy_A Adenosine phosphosulfat 28.6 14 0.00048 27.2 0.4 29 54-82 198-233 (275)
191 2rrh_A VIP peptides; peptide h 28.6 28 0.00095 19.3 1.5 21 87-107 8-28 (29)
192 1rxd_A Protein tyrosine phosph 28.5 31 0.0011 21.6 2.0 15 25-39 94-108 (159)
193 1fbn_A MJ fibrillarin homologu 28.4 8.6 0.00029 26.2 -0.8 18 1-18 101-118 (230)
194 3ezz_A Dual specificity protei 28.0 23 0.00078 22.5 1.3 63 17-93 71-136 (144)
195 1xxl_A YCGJ protein; structura 28.0 45 0.0016 22.5 2.8 18 1-18 46-63 (239)
196 1xwy_A DNAse TATD, deoxyribonu 27.1 72 0.0025 21.8 3.8 34 3-36 97-134 (264)
197 2e9l_A Cytosolic beta-glucosid 26.9 22 0.00075 29.1 1.3 36 10-57 387-427 (469)
198 2r0b_A Serine/threonine/tyrosi 26.8 26 0.00088 22.4 1.4 59 20-92 83-144 (154)
199 3bgv_A MRNA CAP guanine-N7 met 26.4 26 0.00091 24.8 1.5 17 1-17 60-76 (313)
200 2oq2_A Phosphoadenosine phosph 26.3 14 0.00047 27.0 -0.0 30 54-83 189-225 (261)
201 2l63_A GLP-2, glucagon-like pe 26.1 32 0.0011 20.0 1.5 23 86-108 7-29 (33)
202 3ix3_A Transcriptional activat 25.3 23 0.0008 23.4 1.0 57 13-74 58-114 (173)
203 2hcm_A Dual specificity protei 25.3 25 0.00085 23.0 1.1 60 19-92 81-143 (164)
204 1zun_A Sulfate adenylyltransfe 24.9 15 0.00051 28.3 -0.1 18 54-71 207-224 (325)
205 2whl_A Beta-mannanase, baman5; 24.9 24 0.00082 25.2 1.0 49 23-74 2-50 (294)
206 3c5t_B Exendin-4, exenatide; l 24.9 33 0.0011 19.8 1.4 19 89-107 2-20 (31)
207 1jrj_A Exendin-4; Trp-CAGE, GL 24.8 37 0.0013 20.4 1.7 22 86-107 7-28 (39)
208 2g49_C Glucagon preproprotein; 24.5 38 0.0013 19.1 1.6 21 87-107 8-28 (29)
209 1e4m_M Myrosinase MA1; hydrola 24.4 26 0.00088 29.1 1.3 35 11-57 428-467 (501)
210 3dba_A CONE CGMP-specific 3',5 24.4 12 0.0004 24.6 -0.7 35 72-112 135-170 (180)
211 3qom_A 6-phospho-beta-glucosid 24.3 29 0.001 28.6 1.5 40 11-58 397-437 (481)
212 1wcg_A Thioglucosidase, myrosi 24.2 27 0.00091 28.7 1.3 35 11-57 387-426 (464)
213 1yz4_A DUSP15, dual specificit 23.8 30 0.001 22.6 1.2 61 19-93 76-139 (160)
214 4dde_A 6-phospho-beta-glucosid 23.4 30 0.001 28.5 1.5 36 11-58 397-437 (480)
215 1xri_A AT1G05000; structural g 23.2 25 0.00085 22.4 0.8 16 24-39 89-104 (151)
216 2p8j_A S-adenosylmethionine-de 22.9 14 0.00049 23.9 -0.5 18 1-18 49-66 (209)
217 1yop_A KTI11P; zinc finger, me 22.7 35 0.0012 22.7 1.4 33 25-78 17-49 (83)
218 1nt2_A Fibrillarin-like PRE-rR 22.7 11 0.00039 26.0 -1.0 12 1-12 84-95 (210)
219 2vdw_A Vaccinia virus capping 22.6 12 0.0004 27.7 -1.0 17 1-17 74-90 (302)
220 3rgo_A Protein-tyrosine phosph 22.2 47 0.0016 20.9 1.9 58 20-91 82-142 (157)
221 3vii_A Beta-glucosidase; cellu 22.0 34 0.0011 28.3 1.5 35 11-57 396-435 (487)
222 2e0t_A Dual specificity phosph 21.9 37 0.0013 21.6 1.4 53 25-92 83-138 (151)
223 1z8u_A Alpha-hemoglobin stabil 21.9 29 0.00099 24.8 0.9 11 13-23 42-52 (102)
224 3opn_A Putative hemolysin; str 21.8 19 0.00066 25.6 0.0 15 1-15 63-77 (232)
225 1ve3_A Hypothetical protein PH 21.8 16 0.00053 23.9 -0.4 19 1-19 63-81 (227)
226 2p7i_A Hypothetical protein; p 21.7 12 0.00041 24.4 -1.0 16 1-16 67-82 (250)
227 2pxx_A Uncharacterized protein 21.6 13 0.00046 23.8 -0.8 17 1-17 68-84 (215)
228 1wrm_A Dual specificity phosph 21.6 36 0.0012 22.4 1.3 61 19-93 75-138 (165)
229 3duw_A OMT, O-methyltransferas 21.4 19 0.00067 23.8 -0.0 19 1-19 86-104 (223)
230 3ggd_A SAM-dependent methyltra 21.3 12 0.00042 25.1 -1.0 18 1-18 81-98 (245)
231 2i62_A Nicotinamide N-methyltr 21.3 12 0.00042 25.0 -1.0 16 1-16 82-97 (265)
232 2oud_A Dual specificity protei 21.2 37 0.0013 22.8 1.3 61 18-92 78-141 (177)
233 3m6w_A RRNA methylase; rRNA me 21.1 23 0.0008 28.8 0.4 23 1-23 129-151 (464)
234 4erc_A Dual specificity protei 21.0 48 0.0016 20.7 1.8 15 25-39 86-100 (150)
235 2g72_A Phenylethanolamine N-me 20.7 15 0.00051 25.7 -0.7 15 1-15 97-111 (289)
236 4ekj_A Beta-xylosidase; TIM-ba 20.5 28 0.00095 26.4 0.7 28 59-86 88-115 (500)
237 1l3l_A Transcriptional activat 20.5 21 0.00071 24.9 -0.0 54 13-70 55-111 (234)
238 3hnr_A Probable methyltransfer 20.3 15 0.00052 24.0 -0.7 17 1-17 70-86 (220)
239 2e3z_A Beta-glucosidase; TIM b 20.1 38 0.0013 27.8 1.4 39 11-57 389-428 (465)
No 1
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.64 E-value=0.0081 Score=44.90 Aligned_cols=48 Identities=13% Similarity=0.118 Sum_probs=37.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
|+++||||.|+..+.-|+=.|++ .+||+|..+|++....+.+ +.|.|+
T Consensus 42 V~avDi~~~al~~A~~N~~~~gl--------------------------~~~i~~~~~d~l~~l~~~~-~~D~Iv 89 (225)
T 3kr9_A 42 AIAGEVVEGPYQSAVKNVEAHGL--------------------------KEKIQVRLANGLAAFEETD-QVSVIT 89 (225)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTC--------------------------TTTEEEEECSGGGGCCGGG-CCCEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CceEEEEECchhhhcccCc-CCCEEE
Confidence 68999999999999999877765 3578888899888774432 467665
No 2
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.53 E-value=0.0089 Score=45.50 Aligned_cols=48 Identities=10% Similarity=0.140 Sum_probs=38.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
|+++||||+|+..|.-|+=.|++ .+||+|..+|++....+. -+.|.||
T Consensus 48 V~avDi~~~al~~A~~N~~~~gl--------------------------~~~I~v~~gD~l~~~~~~-~~~D~Iv 95 (244)
T 3gnl_A 48 AIAGEVVDGPFQSAQKQVRSSGL--------------------------TEQIDVRKGNGLAVIEKK-DAIDTIV 95 (244)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTC--------------------------TTTEEEEECSGGGGCCGG-GCCCEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CceEEEEecchhhccCcc-ccccEEE
Confidence 68999999999999999877765 368899999999887432 2467766
No 3
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.20 E-value=0.012 Score=44.40 Aligned_cols=48 Identities=6% Similarity=0.071 Sum_probs=38.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
|+++||||.|+..|.-|+=.|++ .+||+|..+|++....+. -+.|.||
T Consensus 48 V~AvDi~~~al~~A~~N~~~~gl--------------------------~~~I~~~~gD~l~~~~~~-~~~D~Iv 95 (230)
T 3lec_A 48 AIAGEVVNGPYQSALKNVSEHGL--------------------------TSKIDVRLANGLSAFEEA-DNIDTIT 95 (230)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTC--------------------------TTTEEEEECSGGGGCCGG-GCCCEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CCcEEEEECchhhccccc-cccCEEE
Confidence 68999999999999999877765 468899999999887442 2567765
No 4
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=93.37 E-value=0.027 Score=39.28 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=19.7
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+||||.+++++.-|++.+
T Consensus 80 v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 80 VIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp EEEEESCHHHHHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHHHHHHHh
Confidence 689999999999999999988
No 5
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=93.37 E-value=0.049 Score=36.12 Aligned_cols=52 Identities=10% Similarity=0.073 Sum_probs=37.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccC-Ccccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHH-DIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~-~i~ld~IVGCiP 79 (118)
|+|+|+||.+++.+.-|+=.|++ ++++|...|......+. +-..|.|+..-|
T Consensus 70 v~~vD~~~~~~~~a~~~~~~~~~---------------------------~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 70 VLFVESDQRSAAVIARNIEALGL---------------------------SGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTC---------------------------SCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC---------------------------CceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 67999999999999877654432 46777777877765322 457888887655
No 6
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=93.05 E-value=0.08 Score=36.22 Aligned_cols=52 Identities=6% Similarity=-0.016 Sum_probs=37.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+|+||.+++++.-|+=.|+ + ++++|...|...+....+-..|.|+..-|
T Consensus 80 V~~vD~s~~~l~~a~~~~~~~~--------------------------~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 80 ATLIEMDRAVSQQLIKNLATLK--------------------------A-GNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp EEEECSCHHHHHHHHHHHHHTT--------------------------C-CSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred EEEEECCHHHHHHHHHHHHHcC--------------------------C-CcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 6899999999999987764332 2 46788888877766444456888887666
No 7
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=92.89 E-value=0.028 Score=42.99 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=22.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHE 25 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~ 25 (118)
|++.||||.|++.+--|+-+|.+.+
T Consensus 151 V~avD~np~a~~~~~~N~~~N~v~~ 175 (278)
T 3k6r_A 151 VIAIEKDPYTFKFLVENIHLNKVED 175 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999998843
No 8
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=92.39 E-value=0.035 Score=43.26 Aligned_cols=24 Identities=25% Similarity=0.582 Sum_probs=22.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhhc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALH 24 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~ 24 (118)
|||.||||.+++++..|+.+++++
T Consensus 211 i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 211 LHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCC
Confidence 589999999999999999999874
No 9
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=92.35 E-value=0.045 Score=42.68 Aligned_cols=52 Identities=21% Similarity=0.369 Sum_probs=38.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|.||||++++++.-|+-.|+++ ++++|...|....-.+ -+.|.||.--|-
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~--------------------------~~i~~~~~D~~~l~~~--~~~D~Iv~NPPy 311 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVD--------------------------EYIEFNVGDATQFKSE--DEFGFIITNPPY 311 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCG--------------------------GGEEEEECCGGGCCCS--CBSCEEEECCCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCC--------------------------CceEEEECChhhcCcC--CCCcEEEECCCC
Confidence 689999999999999999888762 3566777777665432 267888765553
No 10
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=92.17 E-value=0.049 Score=40.23 Aligned_cols=51 Identities=18% Similarity=0.301 Sum_probs=39.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCccc---ceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQL---EGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~l---d~IVGC 77 (118)
|+|+||+|.+++++.-|+=.|++ .+||+|..+|++.... -+. |.||..
T Consensus 149 v~~vDis~~al~~A~~n~~~~~l--------------------------~~~v~~~~~D~~~~~~---~~f~~~D~Ivsn 199 (284)
T 1nv8_A 149 VFATDVSSKAVEIARKNAERHGV--------------------------SDRFFVRKGEFLEPFK---EKFASIEMILSN 199 (284)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC--------------------------TTSEEEEESSTTGGGG---GGTTTCCEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CCceEEEECcchhhcc---cccCCCCEEEEc
Confidence 67999999999999998755533 3578899999887653 267 999986
Q ss_pred ccc
Q 042087 78 RPQ 80 (118)
Q Consensus 78 iPQ 80 (118)
-|=
T Consensus 200 PPy 202 (284)
T 1nv8_A 200 PPY 202 (284)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 11
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=91.68 E-value=0.079 Score=37.31 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=40.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccC-Ccccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHH-DIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~-~i~ld~IVGCiP 79 (118)
|+|+||+|.+++.+.-|+-.|.+ .+|++|...|+....... +-..|.|+.--|
T Consensus 75 v~gvDi~~~~~~~a~~n~~~~~~--------------------------~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 75 IVGVEIQERLADMAKRSVAYNQL--------------------------EDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTC--------------------------TTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred EEEEECCHHHHHHHHHHHHHCCC--------------------------cccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 57999999999999998876654 357788888887765322 457899997555
No 12
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=91.49 E-value=0.059 Score=39.14 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=20.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.+++.+--|+=+|++
T Consensus 151 V~~vD~s~~~~~~a~~n~~~n~~ 173 (278)
T 2frn_A 151 VIAIEKDPYTFKFLVENIHLNKV 173 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 68999999999999999888876
No 13
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=91.29 E-value=0.074 Score=34.21 Aligned_cols=53 Identities=13% Similarity=0.119 Sum_probs=37.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc---CCcccceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH---HDIQLEGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~---~~i~ld~IVGC 77 (118)
|+|+|++|.+++.+--|+=.|.+ .++++|...|....... .+-..|.|+..
T Consensus 70 v~~vD~~~~~~~~a~~~~~~~~~--------------------------~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 70 SICIEKNFAALKVIKENIAITKE--------------------------PEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC--------------------------GGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHhCC--------------------------CcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 57999999999998777644332 35678888887765431 14568999876
Q ss_pred cc
Q 042087 78 RP 79 (118)
Q Consensus 78 iP 79 (118)
-|
T Consensus 124 ~~ 125 (187)
T 2fhp_A 124 PP 125 (187)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 14
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=90.57 E-value=0.16 Score=34.67 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=38.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc-CCcc-cceeeecc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH-HDIQ-LEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~-~~i~-ld~IVGCi 78 (118)
|+|+|+||.+++++.-|+=.|++. .++++|...|....... .+-. .|.|+..-
T Consensus 79 v~gvD~s~~~l~~a~~~~~~~~~~-------------------------~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 79 VTFLELDKTVANQLKKNLQTLKCS-------------------------SEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCC-------------------------TTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHhCCC-------------------------ccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 689999999999998887554431 14677777787766533 1345 88888766
Q ss_pred c
Q 042087 79 P 79 (118)
Q Consensus 79 P 79 (118)
|
T Consensus 134 ~ 134 (201)
T 2ift_A 134 P 134 (201)
T ss_dssp C
T ss_pred C
Confidence 6
No 15
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=90.57 E-value=0.083 Score=34.24 Aligned_cols=53 Identities=11% Similarity=-0.002 Sum_probs=37.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+|+||.+++.+.-|+-.+. +-+|++|...|.........-..|.|+..-|
T Consensus 57 v~~vD~~~~~~~~a~~~~~~~~--------------------------~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 57 AVLVEKNRKAQAIIQDNIIMTK--------------------------AENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp EEEECCCHHHHHHHHHHHHTTT--------------------------CGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred EEEEECCHHHHHHHHHHHHHcC--------------------------CCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 5799999999999887764332 3356788888887755433345888886544
No 16
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=90.56 E-value=0.078 Score=39.38 Aligned_cols=23 Identities=17% Similarity=0.296 Sum_probs=20.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|||.||||.+++++..|+.++++
T Consensus 162 v~GiDi~~~~~~~a~~n~~~~g~ 184 (344)
T 2f8l_A 162 ASGVDVDDLLISLALVGADLQRQ 184 (344)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCHHHHHHHHHHHHhCCC
Confidence 58999999999999999987754
No 17
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=89.96 E-value=0.099 Score=36.19 Aligned_cols=23 Identities=9% Similarity=0.115 Sum_probs=19.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+||+|.+++++.-|+-.|++
T Consensus 92 v~gvD~s~~~~~~a~~~~~~~~~ 114 (254)
T 2h00_A 92 FLATEVDDMCFNYAKKNVEQNNL 114 (254)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 57999999999999988766554
No 18
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=89.93 E-value=0.076 Score=43.44 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=22.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHE 25 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~ 25 (118)
|||.||||.++.++..|++|++++.
T Consensus 214 i~GiEid~~~~~lA~~nl~l~gi~~ 238 (541)
T 2ar0_A 214 FIGLELVPGTRRLALMNCLLHDIEG 238 (541)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTCCC
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCc
Confidence 5899999999999999999998753
No 19
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=89.91 E-value=0.12 Score=42.52 Aligned_cols=25 Identities=24% Similarity=0.514 Sum_probs=22.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHE 25 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~ 25 (118)
+||.||||.++.++.+|++|++++.
T Consensus 286 i~G~Eid~~~~~lA~~Nl~l~gi~~ 310 (544)
T 3khk_A 286 VYGQESNPTTWKLAAMNMVIRGIDF 310 (544)
T ss_dssp EEECCCCHHHHHHHHHHHHHTTCCC
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 5899999999999999999998753
No 20
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=89.73 E-value=0.26 Score=34.95 Aligned_cols=51 Identities=20% Similarity=0.232 Sum_probs=36.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+|++|.+++++.-|+=.+++ ++++|..+|+..... .-+.|.|+..-|-
T Consensus 136 v~~vD~s~~~l~~a~~n~~~~~~---------------------------~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 136 IIAVDRMPDAVSLAQRNAQHLAI---------------------------KNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTC---------------------------CSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC---------------------------CceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 57999999999999888644432 257777777776542 2368999876543
No 21
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=89.38 E-value=0.13 Score=43.53 Aligned_cols=53 Identities=17% Similarity=0.284 Sum_probs=38.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCc-ccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDI-QLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i-~ld~IVGCiP 79 (118)
|+|.||||++++++.-|+-.+++ .++++|...|.+..-.+..- +.|.||.=-|
T Consensus 259 i~G~Did~~av~~A~~N~~~agv--------------------------~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPP 312 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGI--------------------------GELITFEVKDVAQLTNPLPKGPYGTVLSNPP 312 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC--------------------------GGGEEEEECCGGGCCCSCTTCCCCEEEECCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CCceEEEECChhhCccccccCCCCEEEeCCC
Confidence 58999999999999999988776 24577888887765333211 5677876555
No 22
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=89.34 E-value=0.12 Score=41.39 Aligned_cols=50 Identities=24% Similarity=0.319 Sum_probs=36.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhc-cCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCR-HHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr-~~~i~ld~IV 75 (118)
|+++||||+|++.+--|+=+|++++. |++|...|...+.+ ..+-..|.|+
T Consensus 80 V~avDi~~~av~~~~~N~~~Ngl~~~-------------------------~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 80 AYANDISSKAIEIMKENFKLNNIPED-------------------------RYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCGG-------------------------GEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCCc-------------------------eEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 57899999999999999999987321 25666666666654 4444577774
No 23
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=89.19 E-value=0.21 Score=32.88 Aligned_cols=54 Identities=20% Similarity=0.130 Sum_probs=36.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+|++|.+++.+.-|+=.++ +.++++|...|....-...+-..|.|+-..|-
T Consensus 50 v~~vD~s~~~~~~a~~~~~~~~--------------------------~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 50 VFGFDIQDKAIANTTKKLTDLN--------------------------LIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY 103 (197)
T ss_dssp EEEECSCHHHHHHHHHHHHHTT--------------------------CGGGEEEECSCGGGGGGTCCSCEEEEEEEESB
T ss_pred EEEEECCHHHHHHHHHHHHHcC--------------------------CCCCeEEEECCHHHHhhhccCCceEEEEcCCc
Confidence 5799999999998876654332 23567777777655443334568888866544
No 24
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=89.18 E-value=0.12 Score=39.49 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=39.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc---CCcccceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH---HDIQLEGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~---~~i~ld~IVGC 77 (118)
|+|+|+||.+++.+--|+=+|++++ +|++|...|...+.+. .+-..|.|+-.
T Consensus 178 V~~VD~s~~al~~a~~n~~~~gl~~-------------------------~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 178 VTHVDASKKAIGWAKENQVLAGLEQ-------------------------APIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCTT-------------------------SCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCc-------------------------cceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 6799999999999999998887621 1466777777666532 14468888876
Q ss_pred cc
Q 042087 78 RP 79 (118)
Q Consensus 78 iP 79 (118)
-|
T Consensus 233 PP 234 (332)
T 2igt_A 233 PP 234 (332)
T ss_dssp CC
T ss_pred Cc
Confidence 55
No 25
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=88.82 E-value=0.096 Score=44.28 Aligned_cols=54 Identities=24% Similarity=0.249 Sum_probs=43.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+++|+||.+++.+--|+=+|+++ .++++|...|...+.+..+-+.|.|+-=-|
T Consensus 565 V~aVD~s~~al~~a~~N~~~ngl~-------------------------~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 565 TTTVDMSRTYLEWAERNLRLNGLT-------------------------GRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC-------------------------STTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCC-------------------------ccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 679999999999999999888762 146888889988887766678999874333
No 26
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=88.69 E-value=0.15 Score=42.24 Aligned_cols=24 Identities=13% Similarity=0.459 Sum_probs=22.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALH 24 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~ 24 (118)
+||.||||.++.++.+|+.|++++
T Consensus 251 i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 251 YFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC
T ss_pred EEEEECcHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999874
No 27
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=88.50 E-value=0.18 Score=38.79 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=36.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhc---cCCcccceeee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCR---HHDIQLEGIVG 76 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr---~~~i~ld~IVG 76 (118)
|+|+|+||.|++.+--|+=+|++++ ++++|...|...+.. ..+...|.|+-
T Consensus 238 V~~vD~s~~al~~A~~N~~~n~~~~-------------------------~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 238 TTSVDLAKRSRALSLAHFEANHLDM-------------------------ANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHHTTCCC-------------------------TTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCc-------------------------cceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 6899999999999999999987732 145666666655442 23456788874
No 28
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=88.06 E-value=0.17 Score=31.90 Aligned_cols=52 Identities=6% Similarity=0.038 Sum_probs=34.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc---CCcccceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH---HDIQLEGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~---~~i~ld~IVGC 77 (118)
|+|+|+||.+++.+--|+-.+. + +++|...|....... .+-..|.|+..
T Consensus 66 v~~vD~~~~~~~~a~~~~~~~~--------------------------~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 66 AVLVEKDPEAVRLLKENVRRTG--------------------------L--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp EEEECCCHHHHHHHHHHHHHHT--------------------------C--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHHHHHcC--------------------------C--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 5799999999999887654332 2 567777776654321 23368888876
Q ss_pred ccc
Q 042087 78 RPQ 80 (118)
Q Consensus 78 iPQ 80 (118)
-|-
T Consensus 118 ~~~ 120 (171)
T 1ws6_A 118 PPY 120 (171)
T ss_dssp CCT
T ss_pred CCC
Confidence 553
No 29
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=87.95 E-value=0.16 Score=40.03 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=37.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|.||||++++++.-|+-.+++ .++++|...|....-.+ -+.|.||.--|
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl--------------------------~~~I~~~~~D~~~l~~~--~~fD~Iv~NPP 309 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGL--------------------------EDVVKLKQMRLQDFKTN--KINGVLISNPP 309 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC--------------------------TTTEEEEECCGGGCCCC--CCSCEEEECCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CCceEEEECChHHCCcc--CCcCEEEECCc
Confidence 58999999999999999877655 34577777777765432 26788876555
No 30
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=87.86 E-value=0.16 Score=39.93 Aligned_cols=51 Identities=20% Similarity=0.263 Sum_probs=37.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|.||||++++++.-|+-.+++ .++++|...|....-.+ -+.|.||.--|
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl--------------------------~~~I~~~~~D~~~~~~~--~~fD~Iv~NPP 316 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGL--------------------------GDLITFRQLQVADFQTE--DEYGVVVANPP 316 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC--------------------------TTCSEEEECCGGGCCCC--CCSCEEEECCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CCceEEEECChHhCCCC--CCCCEEEECCC
Confidence 58999999999999999877765 24567777777665422 26788875544
No 31
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=87.57 E-value=0.19 Score=36.41 Aligned_cols=24 Identities=33% Similarity=0.503 Sum_probs=21.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhhc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALH 24 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~ 24 (118)
|+|+|+||.|++.+.-|+=+|+++
T Consensus 146 V~~vD~s~~av~~a~~n~~~n~l~ 169 (272)
T 3a27_A 146 VYAIEKNPTAYHYLCENIKLNKLN 169 (272)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCS
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCC
Confidence 689999999999999999888763
No 32
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=87.26 E-value=0.27 Score=31.81 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=25.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc---CCcccceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH---HDIQLEGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~---~~i~ld~IVGC 77 (118)
|+|+|+||.+++.+.-|+-.+ ++ +++|...|......+ ..-..|.|+..
T Consensus 57 v~~vD~~~~~~~~a~~~~~~~--------------------------~~--~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 57 VTAVDLSMDALAVARRNAERF--------------------------GA--VVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp EEEEECC-----------------------------------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHh--------------------------CC--ceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 579999999998876554222 12 788888888886543 23578999987
Q ss_pred ccccc
Q 042087 78 RPQVL 82 (118)
Q Consensus 78 iPQvL 82 (118)
-|-..
T Consensus 109 pp~~~ 113 (215)
T 4dzr_A 109 PPYIP 113 (215)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 66443
No 33
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=87.07 E-value=0.18 Score=37.92 Aligned_cols=25 Identities=40% Similarity=0.684 Sum_probs=22.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHE 25 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~ 25 (118)
|+|+|+||.|++.+.-|+=+|++++
T Consensus 219 V~~vD~s~~ai~~a~~n~~~n~l~~ 243 (336)
T 2yx1_A 219 IYAIDINPHAIELLKKNIKLNKLEH 243 (336)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999998743
No 34
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=86.78 E-value=0.15 Score=38.76 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=21.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.|++.+.-|+=+|++
T Consensus 238 V~gvd~~~~ai~~a~~n~~~ng~ 260 (369)
T 3bt7_A 238 VLATEIAKPSVAAAQYNIAANHI 260 (369)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 68999999999999999988876
No 35
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=86.73 E-value=0.1 Score=37.46 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=39.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc------CCccccee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH------HDIQLEGI 74 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~------~~i~ld~I 74 (118)
|+|+||+|.+++.+.-|+-.++. -++.+|++|...|+.....+ .+-..|.|
T Consensus 63 v~gvDi~~~~~~~a~~n~~~~~~-----------------------~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~V 119 (260)
T 2ozv_A 63 VTLYERSQEMAEFARRSLELPDN-----------------------AAFSARIEVLEADVTLRAKARVEAGLPDEHFHHV 119 (260)
T ss_dssp EEEEESSHHHHHHHHHHTTSGGG-----------------------TTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhhhh-----------------------CCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEE
Confidence 57999999999999888654110 02446788888888776431 13468999
Q ss_pred eecccc
Q 042087 75 VGCRPQ 80 (118)
Q Consensus 75 VGCiPQ 80 (118)
+.--|-
T Consensus 120 v~nPPy 125 (260)
T 2ozv_A 120 IMNPPY 125 (260)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 876443
No 36
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=86.70 E-value=0.19 Score=33.81 Aligned_cols=22 Identities=9% Similarity=0.110 Sum_probs=18.0
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|+||.+++.+.-|+=.|+
T Consensus 82 v~~vD~s~~~~~~a~~~~~~~~ 103 (230)
T 3evz_A 82 VTATEVDEEFFEYARRNIERNN 103 (230)
T ss_dssp EEEEECCHHHHHHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHHHHHHHhC
Confidence 6899999999999988765443
No 37
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=86.66 E-value=0.17 Score=38.56 Aligned_cols=23 Identities=30% Similarity=0.411 Sum_probs=20.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.|++.+.-|+-+|++
T Consensus 246 V~~vD~s~~al~~a~~n~~~ngl 268 (396)
T 3c0k_A 246 VVSVDTSQEALDIARQNVELNKL 268 (396)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 68999999999999999988865
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=86.43 E-value=0.49 Score=33.92 Aligned_cols=61 Identities=10% Similarity=0.139 Sum_probs=41.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+|++|.++..+.-|+=- .|+.+|++|...|+...--+ -..|.|+-.-+.
T Consensus 146 v~gvD~s~~~~~~a~~~~~~--------------------------~~~~~~v~~~~~d~~~~~~~--~~fD~v~~~~~~ 197 (305)
T 3ocj_A 146 LVGIDYDPEALDGATRLAAG--------------------------HALAGQITLHRQDAWKLDTR--EGYDLLTSNGLN 197 (305)
T ss_dssp EEEEESCHHHHHHHHHHHTT--------------------------STTGGGEEEEECCGGGCCCC--SCEEEEECCSSG
T ss_pred EEEEECCHHHHHHHHHHHHh--------------------------cCCCCceEEEECchhcCCcc--CCeEEEEECChh
Confidence 57899999988887655411 12456888888888775423 568888865556
Q ss_pred ccCCChhHH
Q 042087 81 VLNPNSNAM 89 (118)
Q Consensus 81 vLnpnp~am 89 (118)
..-|+|+..
T Consensus 198 ~~~~~~~~~ 206 (305)
T 3ocj_A 198 IYEPDDARV 206 (305)
T ss_dssp GGCCCHHHH
T ss_pred hhcCCHHHH
Confidence 666777653
No 39
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=85.72 E-value=0.29 Score=32.50 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=19.4
Q ss_pred eeecchhhhhhhhccCCcccceeeeccccccCCC
Q 042087 52 RVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPN 85 (118)
Q Consensus 52 RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpn 85 (118)
+++|...|+.....+ -..|.|+...|-.-.++
T Consensus 62 ~~~~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~ 93 (170)
T 3q87_B 62 GGNLVRADLLCSINQ--ESVDVVVFNPPYVPDTD 93 (170)
T ss_dssp SSCEEECSTTTTBCG--GGCSEEEECCCCBTTCC
T ss_pred CCeEEECChhhhccc--CCCCEEEECCCCccCCc
Confidence 466677777664432 46788887766554333
No 40
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=85.29 E-value=0.29 Score=33.28 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=33.8
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGC 77 (118)
|+|+|++|.+++.+--|+=.+++ .++++|...|+...- .+-..|.|+..
T Consensus 103 v~~vD~s~~~~~~a~~~~~~~~~--------------------------~~~~~~~~~d~~~~~--~~~~~D~v~~~ 151 (241)
T 3gdh_A 103 VIAIDIDPVKIALARNNAEVYGI--------------------------ADKIEFICGDFLLLA--SFLKADVVFLS 151 (241)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC--------------------------GGGEEEEESCHHHHG--GGCCCSEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--------------------------CcCeEEEECChHHhc--ccCCCCEEEEC
Confidence 67999999999999877654433 246677777776654 22367777743
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=84.84 E-value=0.78 Score=29.75 Aligned_cols=21 Identities=24% Similarity=0.308 Sum_probs=16.8
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++.+.-|+=-+
T Consensus 47 v~~vD~s~~~l~~a~~~~~~~ 67 (185)
T 3mti_A 47 VYAFDVQEQALGKTSQRLSDL 67 (185)
T ss_dssp EEEEESCHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHc
Confidence 689999999999887665433
No 42
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=84.10 E-value=0.26 Score=33.16 Aligned_cols=57 Identities=12% Similarity=0.345 Sum_probs=41.4
Q ss_pred HHHHHHhhhcccccccccccccccchhhccccccccee-eecchhhhhhhhccCCccccee
Q 042087 15 WIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERR-VEFDESDLLAYCRHHDIQLEGI 74 (118)
Q Consensus 15 winlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~R-veF~eSDLL~ycr~~~i~ld~I 74 (118)
-+..++.++++.+.||+=||..|+- ++-+|.+... .-....|.++..|..+..++.+
T Consensus 90 ~~~~~~~~l~~~~~pVlvHC~sG~R---s~~l~al~l~~~g~~~~~a~~~~~~~g~~l~~~ 147 (156)
T 2f46_A 90 DVETFRQLIGQAEYPVLAYCRTGTR---CSLLWGFRRAAEGMPVDEIIRRAQAAGVNLENF 147 (156)
T ss_dssp HHHHHHHHHHTSCSSEEEECSSSHH---HHHHHHHHHHHTTCCHHHHHHHHHHTTCCCGGG
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCC---HHHHHHHHHHHcCCCHHHHHHHHHHcCCCcHHH
Confidence 3455667777778999999999974 4566766433 2346778999999988887764
No 43
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=83.63 E-value=0.89 Score=28.76 Aligned_cols=20 Identities=40% Similarity=0.376 Sum_probs=16.0
Q ss_pred CcccCCCCcchhhhHHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLYL 20 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyL 20 (118)
|+|+|++|.+++.+.-|+=.
T Consensus 77 v~~~D~~~~~~~~a~~~~~~ 96 (194)
T 1dus_A 77 TTMADINRRAIKLAKENIKL 96 (194)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHH
Confidence 57899999999988766533
No 44
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=83.61 E-value=0.37 Score=32.14 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=18.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++.+.-++-.+.+
T Consensus 56 v~gvD~s~~~~~~a~~~~~~~~~ 78 (219)
T 3jwg_A 56 ITGVDVSYSVLERAKDRLKIDRL 78 (219)
T ss_dssp EEEEESCHHHHHHHHHHHTGGGS
T ss_pred EEEEECCHHHHHHHHHHHHhhcc
Confidence 57999999999999877655544
No 45
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=83.52 E-value=0.82 Score=28.76 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=15.7
Q ss_pred CcccCCCCcchhhhHHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLYL 20 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyL 20 (118)
|+|+|++|.+++.+--|+-.
T Consensus 60 v~~vD~~~~~~~~a~~~~~~ 79 (183)
T 2yxd_A 60 VYAIDYLDGAIEVTKQNLAK 79 (183)
T ss_dssp EEEEECSHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH
Confidence 57899999999888766543
No 46
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=83.17 E-value=0.46 Score=36.17 Aligned_cols=52 Identities=8% Similarity=0.113 Sum_probs=35.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+||||.+++.+.-|+=.+++ .++++|...|....- ..+-+.|.|+.--|
T Consensus 244 v~g~Dis~~~l~~A~~n~~~~gl--------------------------~~~i~~~~~D~~~~~-~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 244 IIGIEKYRKHLIGAEMNALAAGV--------------------------LDKIKFIQGDATQLS-QYVDSVDFAISNLP 295 (373)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC--------------------------GGGCEEEECCGGGGG-GTCSCEEEEEEECC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC--------------------------CCceEEEECChhhCC-cccCCcCEEEECCC
Confidence 68999999999999999866655 245566666655543 22235677776555
No 47
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=82.81 E-value=0.38 Score=37.49 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=20.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++.+.-|+=.|++
T Consensus 311 V~gvD~s~~al~~A~~n~~~~~~ 333 (433)
T 1uwv_A 311 VVGVEGVPALVEKGQQNARLNGL 333 (433)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC
Confidence 68999999999999999877765
No 48
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=82.62 E-value=0.43 Score=35.85 Aligned_cols=56 Identities=13% Similarity=0.169 Sum_probs=36.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|.++||+|..+.++.-|+=..+. .+ + -.||+|...|...+.+..+-+.|.|+--.|
T Consensus 110 V~~VDid~~vi~~ar~~~~~~~~--------------~~---------~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~ 166 (294)
T 3adn_A 110 ITMVEIDAGVVSFCRQYLPNHNA--------------GS---------YDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT 166 (294)
T ss_dssp EEEECSCTTHHHHHHHHCHHHHS--------------SC---------TTCTTCCEECSCSCC---CCCCCEEEEEECC-
T ss_pred EEEEECCHHHHHHHHHhhhhccc--------------cc---------ccCCceEEEEChHHHHHhhcCCCccEEEECCC
Confidence 56899999999998766432211 01 1 137888888888888766678899887444
No 49
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=82.07 E-value=0.49 Score=35.06 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=30.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+||+|++++.+.-|+-.+++ ++++|...|.+..-- -+.|.|++..|
T Consensus 67 v~~vDi~~~~~~~a~~~~~~~~~---------------------------~~v~~~~~D~~~~~~---~~~D~Vv~n~p 115 (299)
T 2h1r_A 67 VITIDIDSRMISEVKKRCLYEGY---------------------------NNLEVYEGDAIKTVF---PKFDVCTANIP 115 (299)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC---------------------------CCEEC----CCSSCC---CCCSEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC---------------------------CceEEEECchhhCCc---ccCCEEEEcCC
Confidence 57999999999888766432221 456777777665431 15788998877
No 50
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=81.15 E-value=0.45 Score=36.07 Aligned_cols=23 Identities=39% Similarity=0.543 Sum_probs=20.9
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.+++.+--|+=+|++
T Consensus 243 v~~vD~s~~~l~~a~~n~~~n~~ 265 (396)
T 2as0_A 243 VIGIDKSPRAIETAKENAKLNGV 265 (396)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC
Confidence 68999999999999999988876
No 51
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=81.03 E-value=0.58 Score=31.83 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=18.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++++.-|+=.+++
T Consensus 86 v~~vD~~~~~~~~a~~~~~~~~~ 108 (221)
T 3u81_A 86 LLTMEINPDCAAITQQMLNFAGL 108 (221)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEEeCChHHHHHHHHHHHHcCC
Confidence 57899999999998877655544
No 52
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=80.90 E-value=0.53 Score=31.10 Aligned_cols=21 Identities=14% Similarity=0.124 Sum_probs=16.8
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|+||.+++.+--|+=.|
T Consensus 75 v~~vD~~~~~~~~a~~~~~~~ 95 (207)
T 1wy7_A 75 VICVEVDKEAVDVLIENLGEF 95 (207)
T ss_dssp EEEEESCHHHHHHHHHHTGGG
T ss_pred EEEEECCHHHHHHHHHHHHHc
Confidence 579999999999888775433
No 53
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=80.77 E-value=0.84 Score=32.49 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=19.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++.+--|+=.|.+
T Consensus 145 v~gvDi~~~~v~~a~~n~~~~~~ 167 (254)
T 2nxc_A 145 ALGVDIDPMVLPQAEANAKRNGV 167 (254)
T ss_dssp EEEEESCGGGHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 67999999999999988876654
No 54
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=80.17 E-value=0.97 Score=29.70 Aligned_cols=64 Identities=22% Similarity=0.250 Sum_probs=35.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+|++|.+++.+.-++=-+++. .. ..++++|...|+...- -.+-..|.|+-.-.-
T Consensus 55 v~~vD~s~~~~~~a~~~~~~~~~~-------------~~---------~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l 111 (235)
T 3sm3_A 55 VTGIDINSEAIRLAETAARSPGLN-------------QK---------TGGKAEFKVENASSLS-FHDSSFDFAVMQAFL 111 (235)
T ss_dssp EEEEESCHHHHHHHHHHTTCCSCC-------------SS---------SSCEEEEEECCTTSCC-SCTTCEEEEEEESCG
T ss_pred EEEEECCHHHHHHHHHHHHhcCCc-------------cc---------cCcceEEEEecccccC-CCCCceeEEEEcchh
Confidence 578999999988876543222210 00 2356777777765442 223457777754332
Q ss_pred ccCCChh
Q 042087 81 VLNPNSN 87 (118)
Q Consensus 81 vLnpnp~ 87 (118)
---++|+
T Consensus 112 ~~~~~~~ 118 (235)
T 3sm3_A 112 TSVPDPK 118 (235)
T ss_dssp GGCCCHH
T ss_pred hcCCCHH
Confidence 2334555
No 55
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=79.70 E-value=0.49 Score=37.05 Aligned_cols=63 Identities=19% Similarity=0.058 Sum_probs=39.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
|+++||||.|++.+.-|+=+|..... .-+ ++ +..+.|+.+ ++|...|........+-..|.|+
T Consensus 74 V~avDi~~~av~~a~~N~~~n~~~~~---~~~---~~-----~~~~~gl~~-i~v~~~Da~~~~~~~~~~fD~I~ 136 (378)
T 2dul_A 74 VWLNDISEDAYELMKRNVMLNFDGEL---RES---KG-----RAILKGEKT-IVINHDDANRLMAERHRYFHFID 136 (378)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCSCC---EEC---SS-----EEEEESSSE-EEEEESCHHHHHHHSTTCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHhccccc---ccc---cc-----cccccCCCc-eEEEcCcHHHHHHhccCCCCEEE
Confidence 57899999999999999988832100 000 11 112233434 77888887766544334578877
No 56
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=79.65 E-value=0.57 Score=32.46 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=14.9
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++++.-|+
T Consensus 98 v~~vD~~~~~~~~a~~~~ 115 (232)
T 3ntv_A 98 VTTIERNETMIQYAKQNL 115 (232)
T ss_dssp EEEEECCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999998887665
No 57
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=79.63 E-value=0.43 Score=35.27 Aligned_cols=46 Identities=22% Similarity=0.324 Sum_probs=32.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+||+|.++.++ .+++|...|.+.... .-..|.|++--|=
T Consensus 67 i~gvDi~~~~~~~a------------------------------------~~~~~~~~D~~~~~~--~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 67 FVGVEIDPKALDLP------------------------------------PWAEGILADFLLWEP--GEAFDLILGNPPY 108 (421)
T ss_dssp EEEEESCTTTCCCC------------------------------------TTEEEEESCGGGCCC--SSCEEEEEECCCC
T ss_pred EEEEECCHHHHHhC------------------------------------CCCcEEeCChhhcCc--cCCCCEEEECcCc
Confidence 57899999998776 356777778777642 2478999997665
Q ss_pred ccCC
Q 042087 81 VLNP 84 (118)
Q Consensus 81 vLnp 84 (118)
+-..
T Consensus 109 ~~~~ 112 (421)
T 2ih2_A 109 GIVG 112 (421)
T ss_dssp CCBS
T ss_pred cCcc
Confidence 5433
No 58
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=78.43 E-value=0.49 Score=35.58 Aligned_cols=71 Identities=24% Similarity=0.309 Sum_probs=39.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhccccccc-ccccccccchhhcc-----ccc----ccceeeecchhhhhhhhccCCcc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKL-FCHCHCKRSFVLRG-----YLW----GYERRVEFDESDLLAYCRHHDIQ 70 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~-~d~~~e~kt~~~~~-----~~~----~l~~RveF~eSDLL~ycr~~~i~ 70 (118)
|+|.||||+++++|.-|.|=..-- .+.|- +- .+-| .+| -.| .+-++|+|...||+..--+..-+
T Consensus 140 I~atDis~~~L~~Ar~~~y~~~~~-~~~~~~~~----~~~f-~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~ 213 (274)
T 1af7_A 140 VFASDIDTEVLEKARSGIYRLSEL-KTLSPQQL----QRYF-MRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGP 213 (274)
T ss_dssp EEEEESCHHHHHHHHHTEEEGGGG-TTSCHHHH----HHHE-EECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCC
T ss_pred EEEEECCHHHHHHHHhcCCchhhh-hcCCHHHH----HHHh-hccccCCCCceeechhhcccCeEEecccCCCCCCcCCC
Confidence 579999999999999888722110 01000 00 0111 010 012 23468999999998721011236
Q ss_pred cceeeecc
Q 042087 71 LEGIVGCR 78 (118)
Q Consensus 71 ld~IVGCi 78 (118)
.|.|+ |.
T Consensus 214 fDlI~-cr 220 (274)
T 1af7_A 214 FDAIF-CR 220 (274)
T ss_dssp EEEEE-EC
T ss_pred eeEEE-EC
Confidence 88887 54
No 59
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=77.98 E-value=0.65 Score=31.08 Aligned_cols=18 Identities=6% Similarity=0.108 Sum_probs=14.4
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 92 v~~vD~~~~~~~~a~~~~ 109 (225)
T 3tr6_A 92 LITCDVDEKSTALAKEYW 109 (225)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHH
Confidence 578999999988876654
No 60
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=77.86 E-value=1.4 Score=29.70 Aligned_cols=48 Identities=19% Similarity=0.148 Sum_probs=31.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVG 76 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVG 76 (118)
|+|+|++|.+++.+.-++=- -+..++++|...|+...-. +-..|.|+-
T Consensus 91 v~gvD~s~~~~~~a~~~~~~--------------------------~~~~~~v~~~~~d~~~~~~--~~~fD~v~~ 138 (235)
T 3lcc_A 91 VVGLDISESALAKANETYGS--------------------------SPKAEYFSFVKEDVFTWRP--TELFDLIFD 138 (235)
T ss_dssp EEEECSCHHHHHHHHHHHTT--------------------------SGGGGGEEEECCCTTTCCC--SSCEEEEEE
T ss_pred EEEEECCHHHHHHHHHHhhc--------------------------cCCCcceEEEECchhcCCC--CCCeeEEEE
Confidence 57999999998887554310 0134577888888776542 226787774
No 61
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=76.73 E-value=0.72 Score=30.80 Aligned_cols=21 Identities=24% Similarity=0.373 Sum_probs=16.6
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++.+.-|+-.+
T Consensus 56 v~gvD~s~~~~~~a~~~~~~~ 76 (217)
T 3jwh_A 56 ITGVDVSYRSLEIAQERLDRL 76 (217)
T ss_dssp EEEEESCHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHh
Confidence 579999999999987765433
No 62
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=76.32 E-value=1.1 Score=33.91 Aligned_cols=23 Identities=22% Similarity=0.043 Sum_probs=18.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+||+|++++++.-|+=.|++
T Consensus 198 v~~vDi~~~~l~~a~~~~~~~g~ 220 (373)
T 2qm3_A 198 IAVLDIDERLTKFIEKAANEIGY 220 (373)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 67999999999999888655443
No 63
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=76.32 E-value=0.33 Score=35.82 Aligned_cols=49 Identities=8% Similarity=0.079 Sum_probs=34.4
Q ss_pred CcccCCCC-------cchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccC---Ccc
Q 042087 1 VYGLDINP-------RAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHH---DIQ 70 (118)
Q Consensus 1 VyGlDiNP-------rAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~---~i~ 70 (118)
|+|+|+|| .+++.+--|+-+|++ .+|++|...|...+.... +-.
T Consensus 108 V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~--------------------------~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 108 VTAFEQHPAVACLLSDGIRRALLNPETQDT--------------------------AARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHSHHHHHH--------------------------HTTEEEEESCHHHHHHHHHHHHCC
T ss_pred EEEEECChhhhHHHHHHHHHHHhHHHhhCC--------------------------ccCeEEEECCHHHHHHhhhccCCC
Confidence 68999999 999998888776665 246777777776654321 135
Q ss_pred cceee
Q 042087 71 LEGIV 75 (118)
Q Consensus 71 ld~IV 75 (118)
.|.|+
T Consensus 162 fD~V~ 166 (258)
T 2r6z_A 162 PDIVY 166 (258)
T ss_dssp CSEEE
T ss_pred ccEEE
Confidence 67776
No 64
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=75.65 E-value=0.64 Score=35.30 Aligned_cols=23 Identities=26% Similarity=0.274 Sum_probs=21.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.++..+--|+=+|++
T Consensus 234 v~~vD~s~~~~~~a~~n~~~n~~ 256 (382)
T 1wxx_A 234 VVAVDSSAEALRRAEENARLNGL 256 (382)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 68999999999999999998877
No 65
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=75.52 E-value=1.1 Score=33.27 Aligned_cols=23 Identities=17% Similarity=0.328 Sum_probs=18.9
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|.||+|++++++.-|+=.+++
T Consensus 231 v~g~Di~~~~i~~a~~n~~~~g~ 253 (354)
T 3tma_A 231 VYAGDLDEKRLGLAREAALASGL 253 (354)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 58999999999999988754443
No 66
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=74.38 E-value=2.2 Score=29.77 Aligned_cols=18 Identities=22% Similarity=0.051 Sum_probs=14.8
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|+||.++..+.-++
T Consensus 145 v~~vD~s~~~~~~a~~~~ 162 (286)
T 3m70_A 145 VTSWDHNENSIAFLNETK 162 (286)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 579999999998887654
No 67
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=74.09 E-value=1.2 Score=30.08 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=17.0
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++.+.-|+=.+
T Consensus 68 v~gvD~s~~~l~~a~~~~~~~ 88 (214)
T 1yzh_A 68 YIGIDIQKSVLSYALDKVLEV 88 (214)
T ss_dssp EEEEESCHHHHHHHHHHHHHH
T ss_pred EEEEEcCHHHHHHHHHHHHHc
Confidence 579999999999988776443
No 68
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=73.88 E-value=1.1 Score=31.09 Aligned_cols=21 Identities=10% Similarity=0.166 Sum_probs=17.2
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+||+|.++..+--|+=.|
T Consensus 76 v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 76 ILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp EEEEESCHHHHHHHHHHHHHH
T ss_pred EEEEEcCHHHHHHHHHHHHHH
Confidence 579999999999887776554
No 69
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=73.62 E-value=1 Score=34.04 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=37.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|.++||+|.+++++.-|+= .+ . .. + ..|++|...|...+.+..+-+.|.|+--.|
T Consensus 143 v~~vDis~~~l~~ar~~~~--~~-~------------~~---------~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 143 IDICEIDETVIEVSKIYFK--NI-S------------CG---------YEDKRVNVFIEDASKFLENVTNTYDVIIVDSS 198 (321)
T ss_dssp EEEEESCHHHHHHHHHHCT--TT-S------------GG---------GGSTTEEEEESCHHHHHHHCCSCEEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHH--hh-c------------cc---------cCCCcEEEEEccHHHHHhhcCCCceEEEECCc
Confidence 5689999999998875531 11 0 00 1 257889999988876555557899986543
No 70
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=72.93 E-value=1.2 Score=30.55 Aligned_cols=23 Identities=9% Similarity=-0.008 Sum_probs=18.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.+++.+.-|+=.+++
T Consensus 80 v~~vD~s~~~~~~a~~~~~~~g~ 102 (204)
T 3njr_A 80 AITIEPRADRIENIQKNIDTYGL 102 (204)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC
Confidence 68999999999999887655444
No 71
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=72.76 E-value=1.1 Score=35.51 Aligned_cols=23 Identities=30% Similarity=0.408 Sum_probs=20.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.|++.+.-|+=.|++
T Consensus 315 V~gvD~s~~ai~~A~~n~~~ngl 337 (425)
T 2jjq_A 315 VKGFDSNEFAIEMARRNVEINNV 337 (425)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 68999999999999999877765
No 72
>1zzp_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; four helix bundle, nuclear export signal, transferase; NMR {Homo sapiens}
Probab=72.19 E-value=0.65 Score=34.52 Aligned_cols=27 Identities=26% Similarity=0.463 Sum_probs=20.6
Q ss_pred hhhhhhccCCcccceeeeccccccCCC--hhHHHHH
Q 042087 59 DLLAYCRHHDIQLEGIVGCRPQVLNPN--SNAMSKI 92 (118)
Q Consensus 59 DLL~ycr~~~i~ld~IVGCiPQvLnpn--p~amsk~ 92 (118)
.||.|| -..|+||||+=|+- -+|++|+
T Consensus 60 ~L~~yC-------~~yvd~i~Q~RnkfafreAv~kl 88 (130)
T 1zzp_A 60 NLYSFC-------VSYVDSIQQMRNKFAFREAINKL 88 (130)
T ss_dssp HHHHHH-------HHHGGGCSCSTTHHHHHHHHHHH
T ss_pred HHHHhc-------cccccchHHHhhhHHHHHHHHHh
Confidence 577888 45788999998875 5677765
No 73
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=71.39 E-value=1.8 Score=29.58 Aligned_cols=51 Identities=16% Similarity=0.315 Sum_probs=33.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+|++|.+++.+.-|+=.++ +-+|++|...|+.....+ -..|.|+-..|
T Consensus 121 v~~~D~~~~~~~~a~~~~~~~~--------------------------~~~~v~~~~~d~~~~~~~--~~~D~v~~~~~ 171 (255)
T 3mb5_A 121 VVSYEIREDFAKLAWENIKWAG--------------------------FDDRVTIKLKDIYEGIEE--ENVDHVILDLP 171 (255)
T ss_dssp EEEECSCHHHHHHHHHHHHHHT--------------------------CTTTEEEECSCGGGCCCC--CSEEEEEECSS
T ss_pred EEEEecCHHHHHHHHHHHHHcC--------------------------CCCceEEEECchhhccCC--CCcCEEEECCC
Confidence 5789999999998877754333 334677777777655322 24777776544
No 74
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=71.07 E-value=1.7 Score=39.59 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=38.4
Q ss_pred CcccCCCCcchhhh--HHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecc
Q 042087 1 VYGLDINPRAIKIS--WIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikis--winlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCi 78 (118)
+||.||||.++.++ .+|+.+|++...-.. ..+...|++..-....-..|.|||=-
T Consensus 351 IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~-----------------------~~I~~dD~L~~~~~~~~kFDVVIgNP 407 (878)
T 3s1s_A 351 IWANDIETLFLELLSIRLGLLFPQLVSSNNA-----------------------PTITGEDVCSLNPEDFANVSVVVMNP 407 (878)
T ss_dssp EEEECSCGGGHHHHHHHHHTTSTTTCBTTBC-----------------------CEEECCCGGGCCGGGGTTEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHHHhhhhcCCCc-----------------------ceEEecchhcccccccCCCCEEEECC
Confidence 58999999999999 999998876321100 11223344332112334689999988
Q ss_pred ccccCC
Q 042087 79 PQVLNP 84 (118)
Q Consensus 79 PQvLnp 84 (118)
|=+...
T Consensus 408 PYg~~~ 413 (878)
T 3s1s_A 408 PYVSGV 413 (878)
T ss_dssp BCCSSC
T ss_pred Cccccc
Confidence 876533
No 75
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=70.69 E-value=1.4 Score=31.71 Aligned_cols=23 Identities=9% Similarity=0.044 Sum_probs=19.2
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++++.-|+=.+++
T Consensus 107 v~~vD~s~~~~~~a~~~~~~~~l 129 (249)
T 3g89_A 107 LVLVDATRKKVAFVERAIEVLGL 129 (249)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCHHHHHHHHHHHHHhCC
Confidence 67999999999999988765554
No 76
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=70.41 E-value=1.5 Score=29.27 Aligned_cols=19 Identities=16% Similarity=0.073 Sum_probs=15.4
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++++.=|+=
T Consensus 84 v~~vD~~~~~~~~a~~~~~ 102 (210)
T 3c3p_A 84 VVMIDPDRDNVEHARRMLH 102 (210)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999999998876653
No 77
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=70.35 E-value=1.6 Score=33.69 Aligned_cols=53 Identities=21% Similarity=0.235 Sum_probs=38.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+|+||.+++.+.-|+=.|++++ ..+++|..+|++.... +-..|.|+-.-|
T Consensus 249 V~gvD~s~~al~~Ar~n~~~ngl~~------------------------~~~v~~~~~D~~~~~~--~~~fD~Ii~npp 301 (375)
T 4dcm_A 249 VVFVDESPMAVASSRLNVETNMPEA------------------------LDRCEFMINNALSGVE--PFRFNAVLCNPP 301 (375)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCGGG------------------------GGGEEEEECSTTTTCC--TTCEEEEEECCC
T ss_pred EEEEECcHHHHHHHHHHHHHcCCCc------------------------CceEEEEechhhccCC--CCCeeEEEECCC
Confidence 6799999999999999988887632 1256777778777442 235788875444
No 78
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=69.47 E-value=1.2 Score=32.46 Aligned_cols=19 Identities=5% Similarity=0.087 Sum_probs=16.0
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++.+.-|+=
T Consensus 133 v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 133 VISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp EEEEESSHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 5799999999999887753
No 79
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=69.24 E-value=1.5 Score=32.43 Aligned_cols=54 Identities=13% Similarity=0.079 Sum_probs=35.4
Q ss_pred CcccCCCCcchhhhHHHHH-H-hhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecc
Q 042087 1 VYGLDINPRAIKISWIKLY-L-NALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikiswinly-L-Nal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCi 78 (118)
|.++||+|.+++++.-|+= + +++ -..|++|...|...+....+-..|.|+--.
T Consensus 117 v~~vDid~~~~~~a~~~~~~~~~~~-------------------------~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 171 (296)
T 1inl_A 117 AILCEVDGLVIEAARKYLKQTSCGF-------------------------DDPRAEIVIANGAEYVRKFKNEFDVIIIDS 171 (296)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGG-------------------------GCTTEEEEESCHHHHGGGCSSCEEEEEEEC
T ss_pred EEEEECCHHHHHHHHHHhHhhcccc-------------------------CCCceEEEECcHHHHHhhCCCCceEEEEcC
Confidence 5689999999988765431 1 111 025788888888777655555688888544
Q ss_pred c
Q 042087 79 P 79 (118)
Q Consensus 79 P 79 (118)
|
T Consensus 172 ~ 172 (296)
T 1inl_A 172 T 172 (296)
T ss_dssp -
T ss_pred C
Confidence 3
No 80
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=68.54 E-value=1.4 Score=30.92 Aligned_cols=18 Identities=11% Similarity=0.267 Sum_probs=14.8
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|..++.+.-|+
T Consensus 91 v~~vD~s~~~~~~a~~~~ 108 (248)
T 3tfw_A 91 LLTLEADAHHAQVARENL 108 (248)
T ss_dssp EEEEECCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999998887665
No 81
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=68.49 E-value=1.2 Score=36.47 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=22.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhhc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALH 24 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~ 24 (118)
+||.||||.+..++.+|++|.+.+
T Consensus 257 i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 257 IFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp EEEECCSHHHHHHHHHHHHHHTCS
T ss_pred hhhhhccHHHHHHHHHHHHhcCCc
Confidence 489999999999999999999875
No 82
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=68.17 E-value=1.9 Score=27.25 Aligned_cols=23 Identities=4% Similarity=-0.096 Sum_probs=18.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.+++.+.-|+--+++
T Consensus 52 v~~vD~~~~~~~~a~~~~~~~~~ 74 (178)
T 3hm2_A 52 AVCFEISEERRERILSNAINLGV 74 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHhCC
Confidence 57999999999998877655444
No 83
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=67.68 E-value=3.7 Score=27.52 Aligned_cols=52 Identities=12% Similarity=-0.027 Sum_probs=31.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+|++|.+++.+.-|+=.++ +.++++|...|+..... .+-..|.|+-+.|
T Consensus 116 v~~vD~~~~~~~~a~~~~~~~~--------------------------~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 116 VWTFEAVEEFYKTAQKNLKKFN--------------------------LGKNVKFFNVDFKDAEV-PEGIFHAAFVDVR 167 (248)
T ss_dssp EEEECSCHHHHHHHHHHHHHTT--------------------------CCTTEEEECSCTTTSCC-CTTCBSEEEECSS
T ss_pred EEEEecCHHHHHHHHHHHHHcC--------------------------CCCcEEEEEcChhhccc-CCCcccEEEECCc
Confidence 5789999999988876653322 22455565666554330 1235777776655
No 84
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=67.36 E-value=3.2 Score=27.33 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=13.0
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+.-+
T Consensus 76 v~~vD~s~~~~~~a~~~ 92 (216)
T 3ofk_A 76 LTVIDVMPRAIGRACQR 92 (216)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHh
Confidence 57899999988876543
No 85
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=66.62 E-value=3.8 Score=28.96 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=29.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVG 76 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVG 76 (118)
|+|+|++|.+++.+--++=-+ |+.+|++|...|+... +-..|.|+.
T Consensus 98 v~gvD~s~~~~~~a~~~~~~~--------------------------~~~~~v~~~~~d~~~~----~~~fD~v~~ 143 (302)
T 3hem_A 98 VIGLTLSENQYAHDKAMFDEV--------------------------DSPRRKEVRIQGWEEF----DEPVDRIVS 143 (302)
T ss_dssp EEEEECCHHHHHHHHHHHHHS--------------------------CCSSCEEEEECCGGGC----CCCCSEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhc--------------------------CCCCceEEEECCHHHc----CCCccEEEE
Confidence 578999999888776543211 1445777777777654 445677664
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=66.16 E-value=4.5 Score=27.30 Aligned_cols=18 Identities=28% Similarity=0.529 Sum_probs=14.7
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 66 v~gvD~s~~~l~~a~~~~ 83 (252)
T 1wzn_A 66 VVGLDLHEEMLRVARRKA 83 (252)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999998887654
No 87
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=66.14 E-value=5.2 Score=26.03 Aligned_cols=18 Identities=11% Similarity=-0.014 Sum_probs=14.0
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-++
T Consensus 54 v~~vD~s~~~~~~a~~~~ 71 (202)
T 2kw5_A 54 VTAVDQSSVGLAKAKQLA 71 (202)
T ss_dssp EEEECSSHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999888776553
No 88
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=65.60 E-value=2.2 Score=28.28 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=17.3
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|+||.+++.+.-|+=.++
T Consensus 67 v~~vD~s~~~~~~a~~~~~~~~ 88 (204)
T 3e05_A 67 IFALERNPQYLGFIRDNLKKFV 88 (204)
T ss_dssp EEEEECCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHHHHHHhC
Confidence 5789999999999887764443
No 89
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=65.30 E-value=1.9 Score=33.60 Aligned_cols=23 Identities=26% Similarity=0.169 Sum_probs=19.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+||.+++.+--|+=.|.+
T Consensus 258 V~gvDis~~al~~A~~n~~~~~~ 280 (381)
T 3dmg_A 258 VVGVEDDLASVLSLQKGLEANAL 280 (381)
T ss_dssp EEEEESBHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 57999999999999888765544
No 90
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=65.07 E-value=2.1 Score=29.46 Aligned_cols=23 Identities=17% Similarity=-0.153 Sum_probs=17.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.++.++--|+=.+++
T Consensus 97 v~~vD~s~~~~~~a~~~~~~~~~ 119 (240)
T 1xdz_A 97 VTIVDSLNKRITFLEKLSEALQL 119 (240)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC
Confidence 57999999999988776544433
No 91
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=64.83 E-value=5 Score=27.73 Aligned_cols=18 Identities=6% Similarity=0.027 Sum_probs=14.8
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 127 v~~vD~~~~~~~~a~~~~ 144 (280)
T 1i9g_A 127 VISYEQRADHAEHARRNV 144 (280)
T ss_dssp EEEECSCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHH
Confidence 578999999998887665
No 92
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=64.52 E-value=2.4 Score=26.66 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=15.6
Q ss_pred CcccCCCCcchhhhHHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLYL 20 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyL 20 (118)
|+|+|+||.+++.+--|+=.
T Consensus 58 v~~~D~~~~~~~~a~~~~~~ 77 (192)
T 1l3i_A 58 VYAIDRNPEAISTTEMNLQR 77 (192)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHH
Confidence 57899999999888766533
No 93
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=64.45 E-value=3 Score=29.31 Aligned_cols=18 Identities=6% Similarity=-0.010 Sum_probs=14.3
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+++|+||..++++.=|+
T Consensus 84 v~~vD~~~~~~~~a~~~~ 101 (221)
T 3dr5_A 84 LTCIDPESEHQRQAKALF 101 (221)
T ss_dssp EEEECSCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999988876654
No 94
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=63.61 E-value=1.6 Score=30.97 Aligned_cols=21 Identities=24% Similarity=-0.031 Sum_probs=16.0
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++++.=|+=-+
T Consensus 88 v~~iD~~~~~~~~a~~~~~~~ 108 (242)
T 3r3h_A 88 VITCDINEGWTKHAHPYWREA 108 (242)
T ss_dssp EEEEECCCSSCCCSHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHc
Confidence 578999999998887665333
No 95
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=62.96 E-value=5 Score=25.64 Aligned_cols=18 Identities=22% Similarity=-0.082 Sum_probs=14.1
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-++
T Consensus 57 v~~vD~s~~~~~~a~~~~ 74 (199)
T 2xvm_A 57 VDAWDKNAMSIANVERIK 74 (199)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999988776553
No 96
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=62.90 E-value=1.4 Score=35.69 Aligned_cols=21 Identities=10% Similarity=-0.081 Sum_probs=18.0
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|+||.++.++.-|+=.+
T Consensus 118 V~~VD~s~~~l~~Ar~N~~~~ 138 (410)
T 3ll7_A 118 GIYIERNDETAVAARHNIPLL 138 (410)
T ss_dssp EEEEESCHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHhHHHh
Confidence 689999999999999887544
No 97
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=62.45 E-value=1.7 Score=31.71 Aligned_cols=56 Identities=18% Similarity=0.144 Sum_probs=36.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|.++||+|.+++++.-|+ ..+. .. + -.|+++...|...+.+..+-+.|.|+--.|
T Consensus 102 v~~vEid~~~v~~ar~~~--~~~~-------------~~---------~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~ 157 (275)
T 1iy9_A 102 ATLVDIDGKVIEYSKKFL--PSIA-------------GK---------LDDPRVDVQVDDGFMHIAKSENQYDVIMVDST 157 (275)
T ss_dssp EEEEESCHHHHHHHHHHC--HHHH-------------TT---------TTSTTEEEEESCSHHHHHTCCSCEEEEEESCS
T ss_pred EEEEECCHHHHHHHHHHh--Hhhc-------------cc---------cCCCceEEEECcHHHHHhhCCCCeeEEEECCC
Confidence 568999999998886543 1110 00 1 247788888877777655567888876554
Q ss_pred c
Q 042087 80 Q 80 (118)
Q Consensus 80 Q 80 (118)
.
T Consensus 158 ~ 158 (275)
T 1iy9_A 158 E 158 (275)
T ss_dssp S
T ss_pred C
Confidence 3
No 98
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=61.57 E-value=2.2 Score=31.24 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=31.9
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|+|+||+|+.++.+--++--+ ++.++++|...|.+..--+ ..|.|++.+|
T Consensus 53 v~~vD~~~~~~~~a~~~~~~~--------------------------~~~~~v~~~~~D~~~~~~~---~fD~vv~nlp 102 (285)
T 1zq9_A 53 VVACELDPRLVAELHKRVQGT--------------------------PVASKLQVLVGDVLKTDLP---FFDTCVANLP 102 (285)
T ss_dssp EEEEESCHHHHHHHHHHHTTS--------------------------TTGGGEEEEESCTTTSCCC---CCSEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHhc--------------------------CCCCceEEEEcceecccch---hhcEEEEecC
Confidence 578899999888765443111 1225677777777654211 5788888776
No 99
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=61.43 E-value=1.9 Score=30.53 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=12.1
Q ss_pred CcccCCCCcchhhhH
Q 042087 1 VYGLDINPRAIKISW 15 (118)
Q Consensus 1 VyGlDiNPrAikisw 15 (118)
|+|+|++|.+++++.
T Consensus 112 V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 112 VIGIDRDLSRCQIPA 126 (236)
T ss_dssp EEEEESCCTTCCCCG
T ss_pred EEEEeCChHHHHHHh
Confidence 578999999887764
No 100
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=61.07 E-value=2.5 Score=28.64 Aligned_cols=22 Identities=5% Similarity=0.061 Sum_probs=17.0
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|++|.+++.+.-|+=.++
T Consensus 81 v~~vD~~~~~~~~a~~~~~~~~ 102 (233)
T 2gpy_A 81 IVSIERDERRYEEAHKHVKALG 102 (233)
T ss_dssp EEEECCCHHHHHHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHHHHHHHcC
Confidence 5789999999998887764443
No 101
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=59.81 E-value=3 Score=32.74 Aligned_cols=24 Identities=13% Similarity=0.025 Sum_probs=22.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALH 24 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~ 24 (118)
|+|+|+||.+++.+--|+=+|+++
T Consensus 239 V~avDis~~al~~a~~n~~~ng~~ 262 (393)
T 4dmg_A 239 ALAVDKDLEALGVLDQAALRLGLR 262 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCC
T ss_pred EEEEECCHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999874
No 102
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=59.69 E-value=5.8 Score=29.71 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=15.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++| +++.+--|+--|++
T Consensus 92 v~gvD~s~-~l~~a~~~~~~~~~ 113 (349)
T 3q7e_A 92 VIGIECSS-ISDYAVKIVKANKL 113 (349)
T ss_dssp EEEEECST-HHHHHHHHHHHTTC
T ss_pred EEEECcHH-HHHHHHHHHHHcCC
Confidence 68999996 88877766544443
No 103
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=59.52 E-value=6.6 Score=25.78 Aligned_cols=22 Identities=23% Similarity=0.561 Sum_probs=17.2
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|++|.+++.+.-++--++
T Consensus 65 v~~vD~s~~~~~~a~~~~~~~~ 86 (219)
T 3dh0_A 65 VYAIDVQEEMVNYAWEKVNKLG 86 (219)
T ss_dssp EEEEESCHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHcC
Confidence 5799999999998877764443
No 104
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=59.50 E-value=7.2 Score=24.65 Aligned_cols=17 Identities=41% Similarity=0.401 Sum_probs=13.5
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+.-+
T Consensus 42 v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 42 LYCIDINVIALKEVKEK 58 (170)
T ss_dssp EEEECSCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHh
Confidence 57899999888877655
No 105
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=59.50 E-value=1.6 Score=31.84 Aligned_cols=61 Identities=10% Similarity=0.092 Sum_probs=36.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|.++||+|..++++.=|+ .+.. |. -....++ --.|++|...|...+.+. +-..|.|+--.|
T Consensus 101 v~~vDid~~~i~~ar~~~---~~~~-~l--~~~~~~~-----------~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~ 161 (281)
T 1mjf_A 101 VIMVEIDEDVIMVSKDLI---KIDN-GL--LEAMLNG-----------KHEKAKLTIGDGFEFIKN-NRGFDVIIADST 161 (281)
T ss_dssp EEEEESCHHHHHHHHHHT---CTTT-TH--HHHHHTT-----------CCSSEEEEESCHHHHHHH-CCCEEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHH---hhcc-cc--ccccccC-----------CCCcEEEEECchHHHhcc-cCCeeEEEECCC
Confidence 568999999999887654 2200 00 0000000 025788888888777655 556888886554
No 106
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=59.18 E-value=6.9 Score=25.14 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=15.8
Q ss_pred CcccCCCCcchhhhHHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLYL 20 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyL 20 (118)
|+|+|++|.+++.+.-++=-
T Consensus 69 v~~~D~s~~~~~~a~~~~~~ 88 (219)
T 3dlc_A 69 IRALDFSKHMNEIALKNIAD 88 (219)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHh
Confidence 57899999999888766543
No 107
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=59.07 E-value=3.1 Score=27.42 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=17.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++.+.-|+=.+.+
T Consensus 86 v~~vD~s~~~~~~a~~~~~~~~~ 108 (205)
T 3grz_A 86 VLATDISDESMTAAEENAALNGI 108 (205)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 57999999999988877654443
No 108
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=59.05 E-value=3.1 Score=27.42 Aligned_cols=18 Identities=11% Similarity=-0.066 Sum_probs=14.5
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 102 v~~vD~~~~~~~~a~~~~ 119 (210)
T 3lbf_A 102 VCSVERIKGLQWQARRRL 119 (210)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHH
Confidence 578999999988876654
No 109
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=58.93 E-value=7.8 Score=26.89 Aligned_cols=18 Identities=17% Similarity=0.049 Sum_probs=13.9
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+--++
T Consensus 93 v~gvD~s~~~~~~a~~~~ 110 (285)
T 4htf_A 93 VILCDLSAQMIDRAKQAA 110 (285)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999888776543
No 110
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=58.74 E-value=2.6 Score=29.75 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=30.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
|+|+|++|.+++.+--++=-+++ ++.++|+|...|+...- .+-..|.|+
T Consensus 107 v~gvD~s~~~~~~a~~~~~~~~~------------------------~~~~~v~~~~~d~~~~~--~~~~fD~v~ 155 (299)
T 3g2m_A 107 VTALELSTSVLAAFRKRLAEAPA------------------------DVRDRCTLVQGDMSAFA--LDKRFGTVV 155 (299)
T ss_dssp EEEEESCHHHHHHHHHHHHTSCH------------------------HHHTTEEEEECBTTBCC--CSCCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHhhccc------------------------ccccceEEEeCchhcCC--cCCCcCEEE
Confidence 57899999998887654321110 12256777777776643 244677776
No 111
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=58.72 E-value=2.6 Score=31.46 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=35.5
Q ss_pred CcccCCCCcchhhhHHHHHH--hhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecc
Q 042087 1 VYGLDINPRAIKISWIKLYL--NALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyL--Nal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCi 78 (118)
|.++||+|..++++.-|+=. ++++ -.|++|...|...+....+-+.|.|+--.
T Consensus 122 v~~vDid~~~i~~ar~~~~~~~~~~~-------------------------~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~ 176 (304)
T 2o07_A 122 VVQCEIDEDVIQVSKKFLPGMAIGYS-------------------------SSKLTLHVGDGFEFMKQNQDAFDVIITDS 176 (304)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGG-------------------------CTTEEEEESCHHHHHHTCSSCEEEEEEEC
T ss_pred EEEEECCHHHHHHHHHHhHHhhcccC-------------------------CCcEEEEECcHHHHHhhCCCCceEEEECC
Confidence 46899999999888655311 1110 25777888887777655556688887644
Q ss_pred c
Q 042087 79 P 79 (118)
Q Consensus 79 P 79 (118)
|
T Consensus 177 ~ 177 (304)
T 2o07_A 177 S 177 (304)
T ss_dssp C
T ss_pred C
Confidence 4
No 112
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=58.51 E-value=4.4 Score=30.54 Aligned_cols=66 Identities=17% Similarity=0.182 Sum_probs=40.4
Q ss_pred hhcccccccccccccccc---hhhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHHhhhccc
Q 042087 22 ALHESFSKLFCHCHCKRS---FVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKIITENAS 98 (118)
Q Consensus 22 al~~~g~~~~d~~~e~kt---~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~itenAs 98 (118)
++...|.+|+=||..|.+ .+.-.||--.. ++ .-.+- ++.|-.++|+ +||+.++. ++-
T Consensus 101 ~l~~~g~~VLVHC~aG~sRS~tvv~ayLm~~~-g~--s~~~A----------~~~v~~~Rp~--~Pn~~~l~-----~~~ 160 (294)
T 3nme_A 101 AVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQ-GY--KLMEA----------HKLLMSKRSC--FPKLDAIR-----NAT 160 (294)
T ss_dssp HHHHHCSEEEEECSSSSSHHHHHHHHHHHHTS-CC--CHHHH----------HHHHHHHCCC--CCCHHHHH-----HHH
T ss_pred HHHhCCCEEEEECCCCCchhHHHHHHHHHHHh-CC--CHHHH----------HHHHHHhCCC--CCChhhhh-----HHH
Confidence 445678999999999874 22223332111 11 12222 3345577888 99998887 677
Q ss_pred HHHHHhhhc
Q 042087 99 EEFLYSLSN 107 (118)
Q Consensus 99 EefLysLSN 107 (118)
.+||..++.
T Consensus 161 ~~~L~~~~k 169 (294)
T 3nme_A 161 IDILTGLKR 169 (294)
T ss_dssp HHHHHCCCC
T ss_pred HHhhhcccc
Confidence 788876653
No 113
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=58.25 E-value=9.2 Score=25.12 Aligned_cols=18 Identities=11% Similarity=0.256 Sum_probs=13.9
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-++
T Consensus 62 ~~~~D~s~~~~~~a~~~~ 79 (246)
T 1y8c_A 62 TWAVDLSQEMLSEAENKF 79 (246)
T ss_dssp EEEECSCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578899999888876553
No 114
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=57.25 E-value=1.5 Score=32.85 Aligned_cols=26 Identities=8% Similarity=0.058 Sum_probs=17.7
Q ss_pred ceeeecchhhhhhhhccCCcccceee
Q 042087 50 ERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 50 ~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
.+|++|...|...+.+...-+.|.|+
T Consensus 144 ~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 144 QERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp HHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred hcCEEEEECCHHHHHHhCcccCCEEE
Confidence 36888888888877654323577764
No 115
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=56.84 E-value=4.8 Score=30.21 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=26.3
Q ss_pred eeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHHhh
Q 042087 51 RRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKIIT 94 (118)
Q Consensus 51 ~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~it 94 (118)
+++++.+.|.+..--+.....|.|||-+|--+ ....+.|++.
T Consensus 91 ~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i--ss~il~~ll~ 132 (271)
T 3fut_A 91 LPVRLVFQDALLYPWEEVPQGSLLVANLPYHI--ATPLVTRLLK 132 (271)
T ss_dssp SSEEEEESCGGGSCGGGSCTTEEEEEEECSSC--CHHHHHHHHH
T ss_pred CCEEEEECChhhCChhhccCccEEEecCcccc--cHHHHHHHhc
Confidence 36777777877664333335789999998533 3445555554
No 116
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=56.34 E-value=3.5 Score=29.30 Aligned_cols=19 Identities=16% Similarity=0.314 Sum_probs=14.9
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+++|++|..++++.=|+=
T Consensus 107 v~~iD~s~~~~~~a~~~~~ 125 (247)
T 1sui_A 107 ILAMDINKENYELGLPVIK 125 (247)
T ss_dssp EEEEESCCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999999988876543
No 117
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=55.78 E-value=2.7 Score=29.44 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=14.2
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+++|++|..++++.=|+
T Consensus 98 v~~iD~~~~~~~~a~~~~ 115 (237)
T 3c3y_A 98 ITAIDFDREAYEIGLPFI 115 (237)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 468899999888887654
No 118
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=55.41 E-value=5.8 Score=27.87 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=31.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCi 78 (118)
|+|+|++|.+++++.-|+=.++ +.++++|...|+.....+ -..|.|+-..
T Consensus 140 v~~vD~s~~~~~~a~~~~~~~~--------------------------~~~~v~~~~~d~~~~~~~--~~~D~V~~~~ 189 (277)
T 1o54_A 140 VFAYEKREEFAKLAESNLTKWG--------------------------LIERVTIKVRDISEGFDE--KDVDALFLDV 189 (277)
T ss_dssp EEEECCCHHHHHHHHHHHHHTT--------------------------CGGGEEEECCCGGGCCSC--CSEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHcC--------------------------CCCCEEEEECCHHHcccC--CccCEEEECC
Confidence 5789999999998887653322 335566666666655322 2467777543
No 119
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=54.86 E-value=3 Score=28.59 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=11.2
Q ss_pred CcccCCCCcchhhhH
Q 042087 1 VYGLDINPRAIKISW 15 (118)
Q Consensus 1 VyGlDiNPrAikisw 15 (118)
|+|+|++|.+++.+-
T Consensus 75 v~gvD~s~~~~~~a~ 89 (263)
T 3pfg_A 75 VEGLELSADMLAIAR 89 (263)
T ss_dssp EEEEESCHHHHHHHH
T ss_pred EEEEECCHHHHHHHH
Confidence 568888888877654
No 120
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=54.71 E-value=5.4 Score=25.07 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=12.8
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+.-|
T Consensus 71 v~~~D~~~~~~~~a~~~ 87 (195)
T 3cgg_A 71 VLGTDLDPILIDYAKQD 87 (195)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHh
Confidence 56889998888776544
No 121
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=54.34 E-value=7.6 Score=26.10 Aligned_cols=19 Identities=11% Similarity=-0.010 Sum_probs=14.9
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++.+--++=
T Consensus 62 v~gvD~s~~~l~~a~~~~~ 80 (256)
T 1nkv_A 62 GTGIDMSSLFTAQAKRRAE 80 (256)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 5789999999888766543
No 122
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=53.90 E-value=6.4 Score=27.52 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=16.4
Q ss_pred eeeecchhhhhhhhccCCcccceeeecccc
Q 042087 51 RRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 51 ~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
++++|...|.+..--+.+-.. .||+-.|-
T Consensus 75 ~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 75 TRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp SEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 567777777765432211234 57776663
No 123
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=53.77 E-value=7.2 Score=25.65 Aligned_cols=18 Identities=22% Similarity=0.111 Sum_probs=14.9
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-++
T Consensus 68 v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 68 VDATDGSPELAAEASRRL 85 (211)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHhc
Confidence 578999999988887665
No 124
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=53.68 E-value=4.9 Score=30.39 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=37.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|.++||+|.++.++.-|+ .... . ++ -.||+|...|...+.+..+-+.|.|+--.|
T Consensus 135 v~~vDid~~~i~~Ar~~~--~~~~-------------~---------~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~ 190 (314)
T 2b2c_A 135 VTMCEIDEMVIDVAKKFL--PGMS-------------C---------GFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSS 190 (314)
T ss_dssp EEEECSCHHHHHHHHHHC--TTTS-------------G---------GGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC
T ss_pred EEEEECCHHHHHHHHHHH--HHhc-------------c---------ccCCCCEEEEEChHHHHHHhcCCCceEEEEcCC
Confidence 468999999998876543 1110 0 12 358899999988877655667899885443
No 125
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=52.73 E-value=5.9 Score=30.14 Aligned_cols=50 Identities=16% Similarity=0.106 Sum_probs=32.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+||+|+.+.++--++= + .++++|...|.+..--+ +.+.|.||+-.|-
T Consensus 75 V~aVEid~~li~~a~~~~~--~---------------------------~~~v~vi~gD~l~~~~~-~~~fD~Iv~NlPy 124 (295)
T 3gru_A 75 VYVIEIDKSLEPYANKLKE--L---------------------------YNNIEIIWGDALKVDLN-KLDFNKVVANLPY 124 (295)
T ss_dssp EEEEESCGGGHHHHHHHHH--H---------------------------CSSEEEEESCTTTSCGG-GSCCSEEEEECCG
T ss_pred EEEEECCHHHHHHHHHHhc--c---------------------------CCCeEEEECchhhCCcc-cCCccEEEEeCcc
Confidence 5789999999887755431 0 13566667776654211 2357899998883
No 126
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=52.65 E-value=12 Score=25.61 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=14.6
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|..++.+.-++=
T Consensus 64 v~~vD~s~~~~~~a~~~~~ 82 (276)
T 3mgg_A 64 ITSIDISPESLEKARENTE 82 (276)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999998888766543
No 127
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=52.44 E-value=2.9 Score=27.90 Aligned_cols=19 Identities=5% Similarity=0.052 Sum_probs=15.0
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++++.-|+=
T Consensus 97 v~~vD~~~~~~~~a~~~~~ 115 (229)
T 2avd_A 97 VVTCEVDAQPPELGRPLWR 115 (229)
T ss_dssp EEEEESCSHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999999988876543
No 128
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=52.43 E-value=2.9 Score=29.00 Aligned_cols=26 Identities=19% Similarity=0.516 Sum_probs=21.4
Q ss_pred ecchhhhhhhhccCCccccee-------eeccc
Q 042087 54 EFDESDLLAYCRHHDIQLEGI-------VGCRP 79 (118)
Q Consensus 54 eF~eSDLL~ycr~~~i~ld~I-------VGCiP 79 (118)
++.++|+..|++.+++++-.+ +||.|
T Consensus 183 ~~t~~dI~~y~~~~~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 183 DWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp TCCHHHHHHHHHHHTCCCCGGGGGTCSCCCBCC
T ss_pred hCCHHHHHHHHHHhCCCCChHHhCCCCCCCCCC
Confidence 488999999999999987543 67766
No 129
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=52.10 E-value=9.3 Score=25.89 Aligned_cols=13 Identities=23% Similarity=0.442 Sum_probs=9.9
Q ss_pred CcccCCCCcchhh
Q 042087 1 VYGLDINPRAIKI 13 (118)
Q Consensus 1 VyGlDiNPrAiki 13 (118)
|+|+|++|.++.-
T Consensus 105 v~gvD~s~~~i~~ 117 (233)
T 2ipx_A 105 VYAVEFSHRSGRD 117 (233)
T ss_dssp EEEECCCHHHHHH
T ss_pred EEEEECCHHHHHH
Confidence 5789999886553
No 130
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=50.98 E-value=5.6 Score=28.10 Aligned_cols=19 Identities=11% Similarity=0.053 Sum_probs=15.3
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++.+.-|+-
T Consensus 138 v~~vD~s~~~~~~a~~~~~ 156 (275)
T 1yb2_A 138 LTVVERDEDNLKKAMDNLS 156 (275)
T ss_dssp EEEECSCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999999988876653
No 131
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=50.05 E-value=3.9 Score=32.87 Aligned_cols=22 Identities=14% Similarity=0.256 Sum_probs=17.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++| +++.+--|+.-|++
T Consensus 184 V~gvD~s~-~l~~A~~~~~~~gl 205 (480)
T 3b3j_A 184 IYAVEAST-MAQHAEVLVKSNNL 205 (480)
T ss_dssp EEEEECHH-HHHHHHHHHHHTTC
T ss_pred EEEEEcHH-HHHHHHHHHHHcCC
Confidence 68999998 88888777777655
No 132
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=48.86 E-value=4.6 Score=30.93 Aligned_cols=52 Identities=17% Similarity=0.211 Sum_probs=34.1
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccC-Ccccceeee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHH-DIQLEGIVG 76 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~-~i~ld~IVG 76 (118)
|.++||+|.+++++.-|+=-.+ . ++ -.||+|...|.+.+.++. +-..|.|+-
T Consensus 147 V~~VDis~~~l~~Ar~~~~~~~---------------~---------gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 147 IDMCEIDKMVVDVSKQFFPDVA---------------I---------GYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp EEEEESCHHHHHHHHHHCHHHH---------------G---------GGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhhc---------------c---------ccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 5689999999998876542110 0 11 247888888888776442 346888875
No 133
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=47.67 E-value=13 Score=27.88 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=16.3
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++++.-|+--+
T Consensus 111 v~gvD~s~~~l~~a~~~~~~~ 131 (383)
T 4fsd_A 111 VIGVDMLDNQLEVARKYVEYH 131 (383)
T ss_dssp EEEEECCHHHHHHHHHTHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHh
Confidence 579999999999887665433
No 134
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=47.57 E-value=10 Score=25.40 Aligned_cols=18 Identities=17% Similarity=0.552 Sum_probs=13.0
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 101 v~~vD~s~~~~~~~~~~~ 118 (227)
T 1g8a_A 101 IFGIEFSPRVLRELVPIV 118 (227)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999998877665443
No 135
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=47.45 E-value=4.3 Score=30.18 Aligned_cols=55 Identities=11% Similarity=0.126 Sum_probs=35.5
Q ss_pred CcccCCCCcchhhhHHHHH-Hhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCCcccceeeecc
Q 042087 1 VYGLDINPRAIKISWIKLY-LNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHDIQLEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikiswinly-LNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~i~ld~IVGCi 78 (118)
|.++||+|..++++.-|+= +|+- + + -.||+|...|...+.+..+-+.|.|+--.
T Consensus 104 v~~vDid~~~i~~ar~~~~~~~~~---------------~---------~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 159 (314)
T 1uir_A 104 AVMVDIDGELVEVAKRHMPEWHQG---------------A---------FDDPRAVLVIDDARAYLERTEERYDVVIIDL 159 (314)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHTT---------------G---------GGCTTEEEEESCHHHHHHHCCCCEEEEEEEC
T ss_pred EEEEECCHHHHHHHHHHhHhhccc---------------c---------ccCCceEEEEchHHHHHHhcCCCccEEEECC
Confidence 4689999999888765431 1110 0 1 24778888888777655555688888654
Q ss_pred c
Q 042087 79 P 79 (118)
Q Consensus 79 P 79 (118)
|
T Consensus 160 ~ 160 (314)
T 1uir_A 160 T 160 (314)
T ss_dssp C
T ss_pred C
Confidence 3
No 136
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=47.02 E-value=6.9 Score=28.95 Aligned_cols=23 Identities=22% Similarity=0.213 Sum_probs=19.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|++|.+++.+.-|+=.|.+
T Consensus 223 v~~vD~s~~~l~~a~~~~~~~~~ 245 (343)
T 2pjd_A 223 LTLCDVSAPAVEASRATLAANGV 245 (343)
T ss_dssp CEEEESBHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHhCC
Confidence 68999999999999888765544
No 137
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=45.31 E-value=5 Score=27.48 Aligned_cols=18 Identities=6% Similarity=0.049 Sum_probs=14.2
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 88 v~~vD~~~~~~~~a~~~~ 105 (239)
T 2hnk_A 88 ILCCDVSEEWTNVARKYW 105 (239)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578899999888876554
No 138
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=45.22 E-value=2.8 Score=27.61 Aligned_cols=18 Identities=33% Similarity=0.440 Sum_probs=15.3
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|+||.+++.+.-|+
T Consensus 77 v~~vD~~~~~~~~a~~~~ 94 (200)
T 1ne2_A 77 VTAFDIDPDAIETAKRNC 94 (200)
T ss_dssp EEEEESCHHHHHHHHHHC
T ss_pred EEEEECCHHHHHHHHHhc
Confidence 579999999999887664
No 139
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=44.20 E-value=5.8 Score=26.91 Aligned_cols=17 Identities=18% Similarity=0.343 Sum_probs=13.8
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.++..+.-|
T Consensus 73 v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 73 WAAYDFSPELLKLARAN 89 (226)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHh
Confidence 57899999988887665
No 140
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=43.80 E-value=13 Score=24.89 Aligned_cols=17 Identities=12% Similarity=0.243 Sum_probs=12.7
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|..++.+--+
T Consensus 60 v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 60 ITGIDSDDDMLEKAADR 76 (259)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHh
Confidence 57889999888776544
No 141
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=43.75 E-value=6.8 Score=26.35 Aligned_cols=19 Identities=26% Similarity=0.328 Sum_probs=15.1
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++.+--|+=
T Consensus 72 v~~vD~s~~~~~~a~~~~~ 90 (257)
T 3f4k_A 72 ITGIDLFPDFIEIFNENAV 90 (257)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5799999999988766543
No 142
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=43.43 E-value=7.4 Score=28.66 Aligned_cols=56 Identities=18% Similarity=0.146 Sum_probs=35.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc-CCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH-HDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~-~~i~ld~IVGCiP 79 (118)
|.|+||+|.+++++.=++ ..+.. . .--.|++|...|...+.+. .+-..|.|+--.|
T Consensus 122 v~~vDid~~~i~~a~~~~--~~~~~-------------~--------~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~ 178 (304)
T 3bwc_A 122 CDLVDIDGEVMEQSKQHF--PQISR-------------S--------LADPRATVRVGDGLAFVRQTPDNTYDVVIIDTT 178 (304)
T ss_dssp EEEEESCHHHHHHHHHHC--HHHHG-------------G--------GGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHh--HHhhc-------------c--------cCCCcEEEEECcHHHHHHhccCCceeEEEECCC
Confidence 568999999988776432 21100 0 0124788888888877654 3557888887544
No 143
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=43.29 E-value=35 Score=23.14 Aligned_cols=17 Identities=29% Similarity=0.634 Sum_probs=12.1
Q ss_pred CcccCCCCc------chhhhHHH
Q 042087 1 VYGLDINPR------AIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPr------Aikiswin 17 (118)
|+|+|++|. .++.+--+
T Consensus 71 v~gvD~s~~~~~~~~~~~~a~~~ 93 (275)
T 3bkx_A 71 VTGIDIASPDYGAPLTLGQAWNH 93 (275)
T ss_dssp EEEECSSCTTCCSSSCHHHHHHH
T ss_pred EEEEECCccccccHHHHHHHHHH
Confidence 578999987 66665444
No 144
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=43.21 E-value=6 Score=28.71 Aligned_cols=30 Identities=17% Similarity=0.432 Sum_probs=25.0
Q ss_pred ecchhhhhhhhccCCccccee-------eeccccccC
Q 042087 54 EFDESDLLAYCRHHDIQLEGI-------VGCRPQVLN 83 (118)
Q Consensus 54 eF~eSDLL~ycr~~~i~ld~I-------VGCiPQvLn 83 (118)
.+.+.|+.+|++.+++++--. +||.|-...
T Consensus 184 ~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~ 220 (252)
T 2o8v_A 184 DWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRK 220 (252)
T ss_dssp SCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC
T ss_pred hCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCc
Confidence 488999999999999998644 799987654
No 145
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=43.02 E-value=9.5 Score=25.66 Aligned_cols=18 Identities=11% Similarity=0.154 Sum_probs=13.8
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 124 v~~~D~~~~~~~~a~~~~ 141 (258)
T 2pwy_A 124 VESYEARPHHLAQAERNV 141 (258)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHH
Confidence 578899998888776554
No 146
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=42.31 E-value=23 Score=24.28 Aligned_cols=34 Identities=15% Similarity=0.039 Sum_probs=22.9
Q ss_pred ccCCC----CcchhhhHHHHHHhhhccccccccccccc
Q 042087 3 GLDIN----PRAIKISWIKLYLNALHESFSKLFCHCHC 36 (118)
Q Consensus 3 GlDiN----PrAikiswinlyLNal~~~g~~~~d~~~e 36 (118)
|||.. |+.....+.-.-+..-.+-|.||.=||+.
T Consensus 99 Gld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~ 136 (259)
T 1zzm_A 99 GLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR 136 (259)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecc
Confidence 56643 34455556666666666789999998864
No 147
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=42.03 E-value=10 Score=26.97 Aligned_cols=17 Identities=24% Similarity=0.261 Sum_probs=12.8
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|++++++--|
T Consensus 55 v~~vD~~~~~~~~a~~~ 71 (244)
T 1qam_A 55 VTAIEIDHKLCKTTENK 71 (244)
T ss_dssp EEEECSCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHh
Confidence 57889999988776433
No 148
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=41.86 E-value=5.6 Score=29.02 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=36.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCCcccceeeeccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHDIQLEGIVGCRP 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~i~ld~IVGCiP 79 (118)
|.++||+|..++++.-++ ..+ + .. + -.|++|...|...+.+..+-..|.|+--.+
T Consensus 105 v~~vDid~~~i~~a~~~~--~~~---~----------~~---------~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~ 160 (283)
T 2i7c_A 105 IDICEIDETVIEVSKIYF--KNI---S----------CG---------YEDKRVNVFIEDASKFLENVTNTYDVIIVDSS 160 (283)
T ss_dssp EEEEESCHHHHHHHHHHC--TTT---S----------GG---------GGSTTEEEEESCHHHHHHHCCSCEEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHh--HHh---c----------cc---------cCCCcEEEEECChHHHHHhCCCCceEEEEcCC
Confidence 468899999888776542 211 0 00 1 257888888888877655667898886443
No 149
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=40.45 E-value=7.1 Score=27.04 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=15.7
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.++..+--|+.
T Consensus 82 v~gvD~s~~~l~~a~~~~~ 100 (293)
T 3thr_A 82 VTSVDASDKMLKYALKERW 100 (293)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHhhh
Confidence 5799999999988876654
No 150
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=40.36 E-value=4.4 Score=31.63 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=34.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccC-Ccccceeeec
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHH-DIQLEGIVGC 77 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~-~i~ld~IVGC 77 (118)
|.++||+|..+.++.=++-++ --.|++|...|...+.++. +-+.|.|+--
T Consensus 116 v~~VEidp~vi~~Ar~~~~~~---------------------------~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 116 NTVVELDAELARLSREWFDIP---------------------------RAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp EEEEESCHHHHHHHHHHSCCC---------------------------CTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred EEEEECCHHHHHHHHHhcccc---------------------------CCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 457899999888775443111 1257888888888887653 4578888754
No 151
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=40.18 E-value=24 Score=22.87 Aligned_cols=17 Identities=18% Similarity=0.378 Sum_probs=12.5
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+--+
T Consensus 66 v~gvD~s~~~~~~a~~~ 82 (203)
T 3h2b_A 66 IEGLEPATRLVELARQT 82 (203)
T ss_dssp EEEECCCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHh
Confidence 57889999888766533
No 152
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=39.65 E-value=9.8 Score=29.71 Aligned_cols=45 Identities=18% Similarity=0.235 Sum_probs=31.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceee
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIV 75 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IV 75 (118)
|+|+|+||.++..|.-|+= .. |+ +||+|.+.|...+- +-+.|.|+
T Consensus 149 V~gIDis~~~l~~Ar~~~~--~~------------------------gl-~~v~~v~gDa~~l~---d~~FDvV~ 193 (298)
T 3fpf_A 149 VNVVEIEPDIAELSRKVIE--GL------------------------GV-DGVNVITGDETVID---GLEFDVLM 193 (298)
T ss_dssp EEEEESSHHHHHHHHHHHH--HH------------------------TC-CSEEEEESCGGGGG---GCCCSEEE
T ss_pred EEEEECCHHHHHHHHHHHH--hc------------------------CC-CCeEEEECchhhCC---CCCcCEEE
Confidence 6799999999988865531 11 24 67888887777652 34577775
No 153
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=39.55 E-value=12 Score=26.04 Aligned_cols=18 Identities=6% Similarity=0.283 Sum_probs=14.8
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.++..+.-|+
T Consensus 61 v~giD~s~~~l~~a~~~~ 78 (218)
T 3dxy_A 61 FLGIEVHSPGVGACLASA 78 (218)
T ss_dssp EEEECSCHHHHHHHHHHH
T ss_pred EEEEEecHHHHHHHHHHH
Confidence 579999999998887654
No 154
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=39.30 E-value=23 Score=26.14 Aligned_cols=22 Identities=14% Similarity=0.400 Sum_probs=17.3
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|++|.+++.+.-|+=-++
T Consensus 146 v~avD~s~~~l~~a~~~~~~~g 167 (315)
T 1ixk_A 146 IYAFDVDENRLRETRLNLSRLG 167 (315)
T ss_dssp EEEECSCHHHHHHHHHHHHHHT
T ss_pred EEEEcCCHHHHHHHHHHHHHhC
Confidence 5789999999998887765443
No 155
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=39.04 E-value=17 Score=25.47 Aligned_cols=17 Identities=12% Similarity=0.046 Sum_probs=12.8
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+--+
T Consensus 50 v~gvD~s~~~~~~a~~~ 66 (284)
T 3gu3_A 50 YTGIDSGETLLAEAREL 66 (284)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHH
Confidence 57889999888776544
No 156
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=38.80 E-value=5.6 Score=27.50 Aligned_cols=18 Identities=22% Similarity=0.231 Sum_probs=14.3
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|+||.+++++.-|+
T Consensus 100 v~~iD~~~~~~~~a~~~~ 117 (232)
T 3cbg_A 100 IIACDQDPNATAIAKKYW 117 (232)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999988876554
No 157
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=38.62 E-value=4.2 Score=34.17 Aligned_cols=63 Identities=11% Similarity=0.019 Sum_probs=35.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhccccccc-ceeeecchhhhhhhhccCC-cccceeeecc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGY-ERRVEFDESDLLAYCRHHD-IQLEGIVGCR 78 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l-~~RveF~eSDLL~ycr~~~-i~ld~IVGCi 78 (118)
|+|+||+|.++.+|.-|+-.-. -+--.+|+ .+||+|.+.|++..--+.. -..|.|+ |-
T Consensus 200 VvGIDiS~~~lelAr~n~e~fr-------------------kr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf-~N 259 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFR-------------------KWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIF-VN 259 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHH-------------------HHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEE-EC
T ss_pred EEEEeCCHHHHHHHHHHHHHHH-------------------HHHHHhCCCCCCeEEEECcccCCccccccCCccEEE-Ec
Confidence 6899999999999987642100 00001234 3688999998876432111 1356665 33
Q ss_pred ccccC
Q 042087 79 PQVLN 83 (118)
Q Consensus 79 PQvLn 83 (118)
+..+.
T Consensus 260 n~~F~ 264 (438)
T 3uwp_A 260 NFAFG 264 (438)
T ss_dssp CTTCC
T ss_pred ccccC
Confidence 33443
No 158
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=38.13 E-value=5.5 Score=28.62 Aligned_cols=23 Identities=13% Similarity=0.120 Sum_probs=19.7
Q ss_pred CcccCC-CCcchhhhHHHHHHhhh
Q 042087 1 VYGLDI-NPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDi-NPrAikiswinlyLNal 23 (118)
|+|+|+ +|.+++++.-|+=+|..
T Consensus 105 v~~~D~s~~~~~~~a~~n~~~N~~ 128 (281)
T 3bzb_A 105 VVATDYPDPEILNSLESNIREHTA 128 (281)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHHhhh
Confidence 689999 89999999999966643
No 159
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=37.79 E-value=9.3 Score=26.07 Aligned_cols=18 Identities=28% Similarity=0.505 Sum_probs=14.2
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.++..+.-++
T Consensus 90 v~gvD~s~~~~~~a~~~~ 107 (298)
T 1ri5_A 90 YYGVDIAEVSINDARVRA 107 (298)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999988876553
No 160
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=37.77 E-value=3.6 Score=27.92 Aligned_cols=17 Identities=18% Similarity=0.385 Sum_probs=14.5
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+.-+
T Consensus 47 V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 47 VVGAELSEAAVERYFTE 63 (203)
T ss_dssp EEEEEECHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHH
Confidence 68999999999988654
No 161
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=37.54 E-value=10 Score=35.07 Aligned_cols=22 Identities=27% Similarity=0.634 Sum_probs=17.0
Q ss_pred CcccCCCCcchhhh--HHHHHHhh
Q 042087 1 VYGLDINPRAIKIS--WIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikis--winlyLNa 22 (118)
|+|+||+|.+++.+ .++..+|+
T Consensus 749 VtGVDIS~emLe~AReRLa~~lnA 772 (950)
T 3htx_A 749 IIGVDISPKGLARAAKMLHVKLNK 772 (950)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTTT
T ss_pred EEEEECCHHHHHHHHHHhhhccch
Confidence 57999999999998 44555554
No 162
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=37.05 E-value=7.1 Score=29.66 Aligned_cols=24 Identities=13% Similarity=-0.086 Sum_probs=20.6
Q ss_pred CcccCCCCcchhhhHHHHHHhhhc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALH 24 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~ 24 (118)
|++.|||++++.++--|+=.|+..
T Consensus 76 ~~A~Di~~~~leiar~~~~~~g~~ 99 (200)
T 3fzg_A 76 YHAYDIDRAEIAFLSSIIGKLKTT 99 (200)
T ss_dssp EEEECSCHHHHHHHHHHHHHSCCS
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCC
Confidence 568999999999999998777664
No 163
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=37.00 E-value=5.4 Score=29.25 Aligned_cols=30 Identities=13% Similarity=0.148 Sum_probs=17.2
Q ss_pred eeeecchhhhhhhhccCCc----ccceeeecccc
Q 042087 51 RRVEFDESDLLAYCRHHDI----QLEGIVGCRPQ 80 (118)
Q Consensus 51 ~RveF~eSDLL~ycr~~~i----~ld~IVGCiPQ 80 (118)
++++|...|.+..--+... .-+.|||.+|-
T Consensus 67 ~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 67 PKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp GGEEEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred CceEEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 3566777776653111101 23689999994
No 164
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=36.20 E-value=11 Score=26.95 Aligned_cols=22 Identities=9% Similarity=0.051 Sum_probs=16.9
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|++|.+++.+.-|+=.++
T Consensus 111 v~avD~~~~~l~~~~~~~~~~g 132 (274)
T 3ajd_A 111 IVAVEISKTRTKALKSNINRMG 132 (274)
T ss_dssp EEEEESCHHHHHHHHHHHHHTT
T ss_pred EEEECCCHHHHHHHHHHHHHhC
Confidence 5789999999998877764433
No 165
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=35.41 E-value=5.7 Score=28.66 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=13.4
Q ss_pred CcccCCCCcchhhhH
Q 042087 1 VYGLDINPRAIKISW 15 (118)
Q Consensus 1 VyGlDiNPrAikisw 15 (118)
|+|+|++|.+|+.+.
T Consensus 93 V~gvD~S~~~i~~a~ 107 (252)
T 2gb4_A 93 VVGVEISEIGIREFF 107 (252)
T ss_dssp EEEECSCHHHHHHHH
T ss_pred EEEEECCHHHHHHHH
Confidence 689999999999874
No 166
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=35.11 E-value=56 Score=22.60 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=23.5
Q ss_pred cccCCCCc--------chhhhHHHHHHhhhccccccccccccc
Q 042087 2 YGLDINPR--------AIKISWIKLYLNALHESFSKLFCHCHC 36 (118)
Q Consensus 2 yGlDiNPr--------AikiswinlyLNal~~~g~~~~d~~~e 36 (118)
.|||..|+ .....+...-+..-.+-|.||.=||+.
T Consensus 106 ~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~ 148 (272)
T 2y1h_A 106 VGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRS 148 (272)
T ss_dssp EECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred ccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 37787542 233445666666667889999999874
No 167
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=34.71 E-value=32 Score=25.62 Aligned_cols=22 Identities=27% Similarity=0.298 Sum_probs=15.0
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+|+|| .++.+--|+=-|++
T Consensus 90 v~gvD~s~-~~~~a~~~~~~~~~ 111 (340)
T 2fyt_A 90 VLGVDQSE-ILYQAMDIIRLNKL 111 (340)
T ss_dssp EEEEESST-HHHHHHHHHHHTTC
T ss_pred EEEEChHH-HHHHHHHHHHHcCC
Confidence 57899997 77777665544433
No 168
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=33.92 E-value=11 Score=30.44 Aligned_cols=60 Identities=7% Similarity=-0.029 Sum_probs=38.9
Q ss_pred CcccCCCCcchhhhHHHHH-Hhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhcc---CCcccceeee
Q 042087 1 VYGLDINPRAIKISWIKLY-LNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRH---HDIQLEGIVG 76 (118)
Q Consensus 1 VyGlDiNPrAikiswinly-LNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~---~~i~ld~IVG 76 (118)
|.++||+|..+.++.=|+= +|+ ..++ .. --+|+++...|-..+.+. .+-+.|.|+-
T Consensus 214 Vt~VEID~~vie~Ar~~~~~l~~------~~l~-----dp---------~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~ 273 (364)
T 2qfm_A 214 VTMVEIDQMVIDGCKKYMRKTCG------DVLD-----NL---------KGDCYQVLIEDCIPVLKRYAKEGREFDYVIN 273 (364)
T ss_dssp EEEEESCHHHHHHHHHHCCC----------CCS-----SS---------EETTEEEEESCHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHhcc------cccc-----cc---------CCCcEEEEECcHHHHHHhhhccCCCceEEEE
Confidence 4578999999988876531 111 0011 00 013789999999999975 4678999987
Q ss_pred cccc
Q 042087 77 CRPQ 80 (118)
Q Consensus 77 CiPQ 80 (118)
=.|.
T Consensus 274 D~~d 277 (364)
T 2qfm_A 274 DLTA 277 (364)
T ss_dssp ECCS
T ss_pred CCCC
Confidence 7655
No 169
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=33.74 E-value=41 Score=25.40 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=14.1
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|++ .+++.+--|+=-|.
T Consensus 89 V~gvD~s-~~~~~a~~~~~~~~ 109 (376)
T 3r0q_C 89 VYAVEAT-KMADHARALVKANN 109 (376)
T ss_dssp EEEEESS-TTHHHHHHHHHHTT
T ss_pred EEEEccH-HHHHHHHHHHHHcC
Confidence 5788999 77777755544333
No 170
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=33.21 E-value=14 Score=27.61 Aligned_cols=17 Identities=6% Similarity=0.044 Sum_probs=13.7
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+||+|+.+.++.-|
T Consensus 71 V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 71 LHAVELDRDLIGRLEQR 87 (279)
T ss_dssp EEEEECCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHh
Confidence 57889999988887655
No 171
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=32.95 E-value=17 Score=26.47 Aligned_cols=21 Identities=10% Similarity=0.041 Sum_probs=16.0
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++.+--|+=.+
T Consensus 103 v~gvD~s~~~~~~a~~~~~~~ 123 (317)
T 1dl5_A 103 VVSVEYSRKICEIAKRNVERL 123 (317)
T ss_dssp EEEEESCHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHc
Confidence 578999999998887665333
No 172
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=32.64 E-value=44 Score=22.67 Aligned_cols=69 Identities=17% Similarity=0.267 Sum_probs=36.5
Q ss_pred ccCCCCc----chhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCc-ccceeeec
Q 042087 3 GLDINPR----AIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDI-QLEGIVGC 77 (118)
Q Consensus 3 GlDiNPr----AikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i-~ld~IVGC 77 (118)
|+|..+. .......-.-+.+..+-|.||.=||.. + ..+++..+++.+. .+..|+.|
T Consensus 96 Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~--~-----------------~~~~~~~l~~~~~p~~~~v~H~ 156 (265)
T 1yix_A 96 GLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRD--A-----------------RADTLAILREEKVTDCGGVLHC 156 (265)
T ss_dssp EEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES--C-----------------HHHHHHHHHHTTGGGTCEEETT
T ss_pred ccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEecC--c-----------------hHHHHHHHHhcCCCCCCEEEEc
Confidence 6666542 222233333445556678888888763 2 2345555554432 34555565
Q ss_pred cccccCCChhHHHHHhh
Q 042087 78 RPQVLNPNSNAMSKIIT 94 (118)
Q Consensus 78 iPQvLnpnp~amsk~it 94 (118)
..++++.+.+++.
T Consensus 157 ----~~~~~~~~~~~~~ 169 (265)
T 1yix_A 157 ----FTEDRETAGKLLD 169 (265)
T ss_dssp ----CCSCHHHHHHHHT
T ss_pred ----CCCCHHHHHHHHH
Confidence 3456666665554
No 173
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=32.62 E-value=30 Score=23.48 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=13.5
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|..+..+--++
T Consensus 87 v~gvD~s~~~~~~a~~~~ 104 (273)
T 3bus_A 87 VTGISISRPQVNQANARA 104 (273)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHH
Confidence 578899998887765544
No 174
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=32.49 E-value=8.7 Score=26.24 Aligned_cols=21 Identities=14% Similarity=0.120 Sum_probs=17.1
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.++..+.-|+=-+
T Consensus 65 v~giD~s~~~l~~a~~~~~~~ 85 (213)
T 2fca_A 65 YIGIELFKSVIVTAVQKVKDS 85 (213)
T ss_dssp EEEECSCHHHHHHHHHHHHHS
T ss_pred EEEEEechHHHHHHHHHHHHc
Confidence 579999999999998776433
No 175
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=32.45 E-value=25 Score=23.41 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=14.6
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+--++
T Consensus 64 v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 64 YIALDADAAMLEVFRQKI 81 (263)
T ss_dssp EEEEESCHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHh
Confidence 578999999998876654
No 176
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=32.43 E-value=31 Score=25.44 Aligned_cols=21 Identities=29% Similarity=0.425 Sum_probs=13.6
Q ss_pred CcccCCCCcchhhhHHHHHHhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNA 22 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNa 22 (118)
|+|+|++| .++.+--|+=-|+
T Consensus 64 v~~vD~s~-~~~~a~~~~~~~~ 84 (328)
T 1g6q_1 64 VIGVDMSS-IIEMAKELVELNG 84 (328)
T ss_dssp EEEEESST-HHHHHHHHHHHTT
T ss_pred EEEEChHH-HHHHHHHHHHHcC
Confidence 57889985 6666655544443
No 177
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=32.27 E-value=13 Score=25.81 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=25.4
Q ss_pred chhhhhhhhccCCccc--ceeeeccccccCCChhHHHHHhh
Q 042087 56 DESDLLAYCRHHDIQL--EGIVGCRPQVLNPNSNAMSKIIT 94 (118)
Q Consensus 56 ~eSDLL~ycr~~~i~l--d~IVGCiPQvLnpnp~amsk~it 94 (118)
.-+++|++++..+-.. =.++||-|+-+.+ -..||.-+.
T Consensus 96 ~l~~~L~~~~~~g~~P~~v~ligi~p~~~~~-g~~LS~~v~ 135 (162)
T 1cfz_A 96 GLADVLSALRFTGEFPKKLTLVGVIPESLEP-HIGLTPTVE 135 (162)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEEECCSCCCS-BSSCCHHHH
T ss_pred CHHHHHHHHHHcCCCCCeEEEEEEEEeEcCC-CCCCCHHHH
Confidence 3468899997765333 2588999999976 344554444
No 178
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=32.03 E-value=30 Score=23.47 Aligned_cols=18 Identities=17% Similarity=0.344 Sum_probs=13.9
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|..+..+.-++
T Consensus 62 v~gvD~s~~~l~~a~~~~ 79 (260)
T 1vl5_A 62 VVAFDLTEDILKVARAFI 79 (260)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHH
Confidence 578999999888776443
No 179
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=31.81 E-value=9.8 Score=27.64 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=33.7
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecccc
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQ 80 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQ 80 (118)
|+|+||+|+++.++--| . ..+++|...|.+..--+....-..|||-+|-
T Consensus 57 v~avEid~~~~~~~~~~---~----------------------------~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy 105 (249)
T 3ftd_A 57 LYVIELDREMVENLKSI---G----------------------------DERLEVINEDASKFPFCSLGKELKVVGNLPY 105 (249)
T ss_dssp EEEECCCHHHHHHHTTS---C----------------------------CTTEEEECSCTTTCCGGGSCSSEEEEEECCT
T ss_pred EEEEECCHHHHHHHHhc---c----------------------------CCCeEEEEcchhhCChhHccCCcEEEEECch
Confidence 57889999888766422 0 1245666666655421211112378999887
Q ss_pred ccCCChhHHHHHhh
Q 042087 81 VLNPNSNAMSKIIT 94 (118)
Q Consensus 81 vLnpnp~amsk~it 94 (118)
-+ ....+.+++.
T Consensus 106 ~i--~~~il~~ll~ 117 (249)
T 3ftd_A 106 NV--ASLIIENTVY 117 (249)
T ss_dssp TT--HHHHHHHHHH
T ss_pred hc--cHHHHHHHHh
Confidence 32 2444555554
No 180
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=31.65 E-value=21 Score=28.90 Aligned_cols=63 Identities=16% Similarity=0.128 Sum_probs=38.3
Q ss_pred CcccCCCCcchhhhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeeccc-
Q 042087 1 VYGLDINPRAIKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRP- 79 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiP- 79 (118)
|+++||+|.+++++--|+=-++++ .|++...|........+-..|.|+-=-|
T Consensus 133 V~AvDis~~rl~~~~~n~~r~g~~---------------------------nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 133 LVTNEIFPKRAKILSENIERWGVS---------------------------NAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCS---------------------------SEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCC---------------------------ceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 578999999999988887555441 2344444443332212345788875333
Q ss_pred ---cccCCChhHHH
Q 042087 80 ---QVLNPNSNAMS 90 (118)
Q Consensus 80 ---QvLnpnp~ams 90 (118)
-+++.+|++..
T Consensus 186 Sg~G~~rr~p~~~~ 199 (456)
T 3m4x_A 186 SGEGMFRKDPNAIK 199 (456)
T ss_dssp CCGGGTTTCHHHHH
T ss_pred CCccccccCHHHhh
Confidence 36677777654
No 181
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=31.40 E-value=9.8 Score=24.80 Aligned_cols=21 Identities=10% Similarity=-0.186 Sum_probs=16.7
Q ss_pred CcccCCCCcchhhhHHHHHHh
Q 042087 1 VYGLDINPRAIKISWIKLYLN 21 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLN 21 (118)
|+|+|++|.+++.+.-|+-.+
T Consensus 92 v~~vD~s~~~~~~a~~~~~~~ 112 (207)
T 1jsx_A 92 FTLLDSLGKRVRFLRQVQHEL 112 (207)
T ss_dssp EEEEESCHHHHHHHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHHHHHHc
Confidence 578999999999887775443
No 182
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=30.93 E-value=17 Score=23.93 Aligned_cols=18 Identities=17% Similarity=0.124 Sum_probs=13.8
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+--|+
T Consensus 105 v~~vD~~~~~~~~a~~~~ 122 (215)
T 2yxe_A 105 VVSIERIPELAEKAERTL 122 (215)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHH
Confidence 578899998888776554
No 183
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=30.80 E-value=19 Score=24.49 Aligned_cols=19 Identities=21% Similarity=0.349 Sum_probs=15.0
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.+++.+--|+=
T Consensus 117 v~~vD~~~~~~~~a~~~~~ 135 (235)
T 1jg1_A 117 VYTIERIPELVEFAKRNLE 135 (235)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 5789999999888776653
No 184
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=30.38 E-value=25 Score=22.31 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=11.7
Q ss_pred cccccccccccccc
Q 042087 26 SFSKLFCHCHCKRS 39 (118)
Q Consensus 26 ~g~~~~d~~~e~kt 39 (118)
.+.||+=||..|+.
T Consensus 108 ~~~~vlVHC~aG~~ 121 (167)
T 3s4o_A 108 PPPTIGVHCVAGLG 121 (167)
T ss_dssp CCCEEEEECSSSSS
T ss_pred CCCcEEEECCCCCC
Confidence 48899999998864
No 185
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=29.81 E-value=6.3 Score=28.28 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=16.4
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+|+||+|.++..+.-|+.-+..
T Consensus 73 v~gvDis~~~i~~A~~~~~~~~~ 95 (292)
T 3g07_A 73 MVGLDIDSRLIHSARQNIRHYLS 95 (292)
T ss_dssp EEEEESCHHHHHHHHHTC-----
T ss_pred EEEECCCHHHHHHHHHHHHhhhh
Confidence 57999999999999988765543
No 186
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=29.77 E-value=21 Score=22.82 Aligned_cols=60 Identities=17% Similarity=0.281 Sum_probs=33.3
Q ss_pred HHhhhcccccccccccccccc---hhhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHH
Q 042087 19 YLNALHESFSKLFCHCHCKRS---FVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKI 92 (118)
Q Consensus 19 yLNal~~~g~~~~d~~~e~kt---~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~ 92 (118)
+++...+.|.+|+-||..|++ .+.-.||- .+-.....+-+.++|. ++|. ..||+.-+..+
T Consensus 73 fi~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm---~~~~~~~~~A~~~v~~----------~R~~-~~pn~~f~~qL 135 (145)
T 2nt2_A 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAM---KEYGWNLDRAYDYVKE----------RRTV-TKPNPSFMRQL 135 (145)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHH---HHHCCCHHHHHHHHHH----------HCTT-CCCCHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCchHHHHHHHHHH---HHhCCCHHHHHHHHHH----------HCCC-cCCCHHHHHHH
Confidence 444444678999999998865 12223432 2222344455565543 4453 46777655543
No 187
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=29.51 E-value=21 Score=22.80 Aligned_cols=60 Identities=23% Similarity=0.488 Sum_probs=33.6
Q ss_pred HHhhhcccccccccccccccch---hhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHH
Q 042087 19 YLNALHESFSKLFCHCHCKRSF---VLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKI 92 (118)
Q Consensus 19 yLNal~~~g~~~~d~~~e~kt~---~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~ 92 (118)
++...-+.|.+|+-||..|++= +.-.|| ..+......+.+.+.|. ++|.+ .||+.-+..+
T Consensus 75 ~i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl---~~~~~~~~~~a~~~v~~----------~R~~~-~pn~~f~~qL 137 (149)
T 1zzw_A 75 FIEEAHQCGKGLLIHCQAGVSRSATIVIAYL---MKHTRMTMTDAYKFVKG----------KRPII-SPNLNFMGQL 137 (149)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHH---HHHSCCCHHHHHHHHHH----------HCTTC-CCCHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCCHHHHHHHHHH---HHHcCCCHHHHHHHHHH----------HCCcc-CCCHHHHHHH
Confidence 4444445788999999998641 112232 22223345566666544 34553 5887766544
No 188
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=28.93 E-value=7.4 Score=27.28 Aligned_cols=17 Identities=12% Similarity=-0.218 Sum_probs=14.0
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|++++++-=+
T Consensus 81 v~g~D~s~~~l~~a~~~ 97 (263)
T 2a14_A 81 ITLSDFTDRNREELEKW 97 (263)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred eeeccccHHHHHHHHHH
Confidence 68999999999987443
No 189
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=28.85 E-value=12 Score=27.70 Aligned_cols=12 Identities=25% Similarity=0.155 Sum_probs=10.6
Q ss_pred CcccCCCCcchh
Q 042087 1 VYGLDINPRAIK 12 (118)
Q Consensus 1 VyGlDiNPrAik 12 (118)
|.+.||||+|+.
T Consensus 62 V~atDInp~Av~ 73 (153)
T 2k4m_A 62 LVLTDIKPSHGG 73 (153)
T ss_dssp EEEECSSCSSTT
T ss_pred EEEEECCccccc
Confidence 568899999998
No 190
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=28.65 E-value=14 Score=27.20 Aligned_cols=29 Identities=17% Similarity=0.560 Sum_probs=23.4
Q ss_pred ecchhhhhhhhccCCccccee-------eecccccc
Q 042087 54 EFDESDLLAYCRHHDIQLEGI-------VGCRPQVL 82 (118)
Q Consensus 54 eF~eSDLL~ycr~~~i~ld~I-------VGCiPQvL 82 (118)
.+.+.|+..|++.++++.--+ +||.|=..
T Consensus 198 ~wt~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~ 233 (275)
T 2goy_A 198 SMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTR 233 (275)
T ss_dssp TCCHHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBC
T ss_pred hCCHHHHHHHHHHhCCCCChHHHcCCCCCCCccCCC
Confidence 488999999999999997543 79987443
No 191
>2rrh_A VIP peptides; peptide hormone, hormone; NMR {Homo sapiens} PDB: 2rri_A
Probab=28.58 E-value=28 Score=19.33 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=18.3
Q ss_pred hHHHHHhhhcccHHHHHhhhc
Q 042087 87 NAMSKIITENASEEFLYSLSN 107 (118)
Q Consensus 87 ~amsk~itenAsEefLysLSN 107 (118)
..+||...+.+..+||.+|-|
T Consensus 8 sdysk~l~~~~ak~fl~~l~~ 28 (29)
T 2rrh_A 8 DNYTRLRKQMAVKKYLNSILN 28 (29)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 468999999999999999865
No 192
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=28.45 E-value=31 Score=21.64 Aligned_cols=15 Identities=20% Similarity=0.217 Sum_probs=12.2
Q ss_pred ccccccccccccccc
Q 042087 25 ESFSKLFCHCHCKRS 39 (118)
Q Consensus 25 ~~g~~~~d~~~e~kt 39 (118)
..+.||+=||..|++
T Consensus 94 ~~~~~vlVHC~aG~~ 108 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLG 108 (159)
T ss_dssp STTCEEEEECSSSST
T ss_pred CCCCeEEEECCCCCC
Confidence 357899999998874
No 193
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=28.44 E-value=8.6 Score=26.22 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=14.9
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-|+
T Consensus 101 v~gvD~s~~~~~~a~~~~ 118 (230)
T 1fbn_A 101 VYAIEYAPRIMRELLDAC 118 (230)
T ss_dssp EEEEESCHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHh
Confidence 689999999998876653
No 194
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=28.01 E-value=23 Score=22.54 Aligned_cols=63 Identities=16% Similarity=0.340 Sum_probs=36.5
Q ss_pred HHHHhhhcccccccccccccccc---hhhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHHh
Q 042087 17 KLYLNALHESFSKLFCHCHCKRS---FVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKII 93 (118)
Q Consensus 17 nlyLNal~~~g~~~~d~~~e~kt---~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~i 93 (118)
.-+++...+.|.+|+=||..|++ .+.-.|| ..+-.+...|-++++| .++|+ .+||+.-|..+.
T Consensus 71 ~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~ayl---m~~~~~~~~~A~~~v~----------~~Rp~-~~pn~~f~~qL~ 136 (144)
T 3ezz_A 71 IEYIDAVKDCRGRVLVHSQAGISRSATICLAYL---MMKKRVRLEEAFEFVK----------QRRSI-ISPNFSFMGQLL 136 (144)
T ss_dssp HHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHH---HHHHTCCHHHHHHHHH----------TTCTT-CCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCCCChhHHHHHHHH---HHHcCCCHHHHHHHHH----------HHCCc-cCCCHhHHHHHH
Confidence 34455555678899999998874 1222332 1222334455566654 34564 578887666543
No 195
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=27.98 E-value=45 Score=22.50 Aligned_cols=18 Identities=11% Similarity=0.189 Sum_probs=14.2
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+--++
T Consensus 46 v~~vD~s~~~~~~a~~~~ 63 (239)
T 1xxl_A 46 CIGVDATKEMVEVASSFA 63 (239)
T ss_dssp EEEEESCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 578999999988776554
No 196
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=27.09 E-value=72 Score=21.83 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=21.4
Q ss_pred ccCCC----CcchhhhHHHHHHhhhccccccccccccc
Q 042087 3 GLDIN----PRAIKISWIKLYLNALHESFSKLFCHCHC 36 (118)
Q Consensus 3 GlDiN----PrAikiswinlyLNal~~~g~~~~d~~~e 36 (118)
|||.. |+.....+...-+.+..+-|.||.=||..
T Consensus 97 Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~ 134 (264)
T 1xwy_A 97 GLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRD 134 (264)
T ss_dssp EEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence 56654 33333445555566666778999998863
No 197
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X*
Probab=26.87 E-value=22 Score=29.14 Aligned_cols=36 Identities=14% Similarity=0.378 Sum_probs=25.8
Q ss_pred chhhhHHHHHHhhhcc----cccccccccccccchhhccc-ccccceeeecch
Q 042087 10 AIKISWIKLYLNALHE----SFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDE 57 (118)
Q Consensus 10 AikiswinlyLNal~~----~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~e 57 (118)
.-.|.|+.-||+++.+ +|-+ ++|| .|+|+|-+|...
T Consensus 387 ~~Ri~yl~~hl~~~~~Ai~~dGv~------------v~GY~~WSl~Dn~eW~~ 427 (469)
T 2e9l_A 387 TQRWEYFRQTFQELFKAIQLDKVN------------LQVYCAWSLLDNFEWNQ 427 (469)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC------------EEEEEEECSBCCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC------------EEEEEecccccccchhc
Confidence 3578899999987742 4433 5676 599999998654
No 198
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=26.75 E-value=26 Score=22.44 Aligned_cols=59 Identities=19% Similarity=0.294 Sum_probs=32.4
Q ss_pred Hhhhcccccccccccccccch---hhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHH
Q 042087 20 LNALHESFSKLFCHCHCKRSF---VLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKI 92 (118)
Q Consensus 20 LNal~~~g~~~~d~~~e~kt~---~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~ 92 (118)
++..-+.|.+|+-||..|++- +.-.|| +.+......|-+.+.|. +.| ...||+.-+..+
T Consensus 83 i~~~~~~~~~vlvHC~aG~~RS~~~~~ayl---~~~~~~~~~~a~~~v~~----------~R~-~~~pn~~f~~qL 144 (154)
T 2r0b_A 83 IDGSLQMGGKVLVHGNAGISRSAAFVIAYI---METFGMKYRDAFAYVQE----------RRF-CINPNAGFVHQL 144 (154)
T ss_dssp HHHHHHTTCCEEEECSSSSSHHHHHHHHHH---HHHHTCCHHHHHHHHHH----------HST-TCCCCHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCCChHHHHHHHHH---HHHcCCCHHHHHHHHHH----------HCC-ccCCCHHHHHHH
Confidence 333335688999999998641 122332 22223344555665543 445 356777665544
No 199
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=26.44 E-value=26 Score=24.80 Aligned_cols=17 Identities=18% Similarity=0.135 Sum_probs=13.3
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+--+
T Consensus 60 v~gvD~s~~~l~~a~~~ 76 (313)
T 3bgv_A 60 LVCTDIADVSVKQCQQR 76 (313)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHH
Confidence 57899999988877554
No 200
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=26.34 E-value=14 Score=27.02 Aligned_cols=30 Identities=7% Similarity=0.194 Sum_probs=24.1
Q ss_pred ecchhhhhhhhccCCccccee-------eeccccccC
Q 042087 54 EFDESDLLAYCRHHDIQLEGI-------VGCRPQVLN 83 (118)
Q Consensus 54 eF~eSDLL~ycr~~~i~ld~I-------VGCiPQvLn 83 (118)
.+.+.|+..|++.++++.--+ +||.|-...
T Consensus 189 ~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~ 225 (261)
T 2oq2_A 189 NWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQP 225 (261)
T ss_dssp TCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCC
T ss_pred hCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCc
Confidence 478999999999999987643 799886543
No 201
>2l63_A GLP-2, glucagon-like peptide 2; hormone, GPCR, docking, small bowel syndrome; NMR {Homo sapiens} PDB: 2l64_A
Probab=26.07 E-value=32 Score=19.95 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.1
Q ss_pred hhHHHHHhhhcccHHHHHhhhcc
Q 042087 86 SNAMSKIITENASEEFLYSLSNY 108 (118)
Q Consensus 86 p~amsk~itenAsEefLysLSNY 108 (118)
...+|++....|-.+||.+|-|.
T Consensus 7 Tsd~s~~l~~~aak~fl~wL~~~ 29 (33)
T 2l63_A 7 SDEMNTILDNLAARDFINWLIQT 29 (33)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC
Confidence 35789999999999999999874
No 202
>3ix3_A Transcriptional activator protein LASR; quorum sensing receptor, triphenyl mimics, DNA- binding, quorum sensing; HET: OHN; 1.40A {Pseudomonas aeruginosa} PDB: 3ix4_A* 3ix8_A* 3jpu_A* 2uv0_E*
Probab=25.33 E-value=23 Score=23.37 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=40.7
Q ss_pred hhHHHHHHhhhcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCccccee
Q 042087 13 ISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGI 74 (118)
Q Consensus 13 iswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~I 74 (118)
-+|.+.|...---.--|+..||....+ .+.|.-....+=.+..++...+++|+. .++
T Consensus 58 ~~W~~~Y~~~~y~~~DPvv~~~~~~~~----P~~W~~~~~~~~~~~~~~~~a~~~Gl~-~G~ 114 (173)
T 3ix3_A 58 AAWREHYDRAGYARVDPTVSHCTQSVL----PIFWEPSIYQTRKQHEFFEEASAAGLV-YGL 114 (173)
T ss_dssp HHHHHHHHHTTGGGTCHHHHHHHHCSS----CEECCGGGCCSHHHHHHHHHHHHTTCC-SEE
T ss_pred HHHHHHHHHCcCeecCchhhhhccCCC----CeEeCcccccChhHHHHHHHHHHcCCC-ceE
Confidence 479999987666666788888765443 678885544444467889999999983 444
No 203
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=25.32 E-value=25 Score=23.02 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=33.1
Q ss_pred HHhhhcccccccccccccccc--h-hhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHH
Q 042087 19 YLNALHESFSKLFCHCHCKRS--F-VLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKI 92 (118)
Q Consensus 19 yLNal~~~g~~~~d~~~e~kt--~-~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~ 92 (118)
++...-+.|.+|+-||..|++ - +.-.|| +.+..+...|-+.+.|. +.|. ..||+.-|..+
T Consensus 81 ~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayL---m~~~~~~~~~A~~~v~~----------~R~~-~~pn~~f~~qL 143 (164)
T 2hcm_A 81 AMEAAVRDGGSCLVYCKNGRSRSAAVCTAYL---MRHRGHSLDRAFQMVKS----------ARPV-AEPNLGFWAQL 143 (164)
T ss_dssp HHHHHHHTTCEEEEEESSSSHHHHHHHHHHH---HHHSCCCHHHHHHHHHH----------HCTT-CCCCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCchHHHHHHHHH---HHHhCCCHHHHHHHHHH----------HCCC-cCCCHHHHHHH
Confidence 444444568899999999864 1 112332 22223344455555543 4554 46787766544
No 204
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=24.92 E-value=15 Score=28.28 Aligned_cols=18 Identities=22% Similarity=0.422 Sum_probs=16.4
Q ss_pred ecchhhhhhhhccCCccc
Q 042087 54 EFDESDLLAYCRHHDIQL 71 (118)
Q Consensus 54 eF~eSDLL~ycr~~~i~l 71 (118)
.+.+.|+..|++.++|++
T Consensus 207 ~wt~~dIw~Yi~~~~lp~ 224 (325)
T 1zun_A 207 NWTELDIWQYIYLEGIPI 224 (325)
T ss_dssp TCCHHHHHHHHHHHTCCC
T ss_pred hCCHHHHHHHHHHhCCCc
Confidence 588999999999999986
No 205
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=24.92 E-value=24 Score=25.16 Aligned_cols=49 Identities=14% Similarity=0.145 Sum_probs=30.5
Q ss_pred hcccccccccccccccchhhcccccccceeeecchhhhhhhhccCCccccee
Q 042087 23 LHESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGI 74 (118)
Q Consensus 23 l~~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~I 74 (118)
|+-+|..|+| ..|+.|.|||--++..---.|.++| +..+++.|+..=||
T Consensus 2 l~v~G~~i~d--~~G~~~~lrGvn~~~~w~~~~~~~~-~~~i~~~G~N~VRi 50 (294)
T 2whl_A 2 FSVDGNTLYD--ANGQPFVMRGINHGHAWYKDTASTA-IPAIAEQGANTIRI 50 (294)
T ss_dssp CEEETTEEEC--TTSCBCCCEEEEECGGGCGGGHHHH-HHHHHHTTCSEEEE
T ss_pred eEEECCEEEC--CCCCEEEEEEeecccccCCcchHHH-HHHHHHcCCCEEEE
Confidence 5567888888 6788999998654321111234444 45666777666665
No 206
>3c5t_B Exendin-4, exenatide; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} SCOP: j.6.1.1 PDB: 3c59_B*
Probab=24.91 E-value=33 Score=19.81 Aligned_cols=19 Identities=37% Similarity=0.420 Sum_probs=17.2
Q ss_pred HHHHhhhcccHHHHHhhhc
Q 042087 89 MSKIITENASEEFLYSLSN 107 (118)
Q Consensus 89 msk~itenAsEefLysLSN 107 (118)
+||.+.+.|-.+|+..|-|
T Consensus 2 ~SkyLe~~aakdFv~WL~n 20 (31)
T 3c5t_B 2 LSKQMEEEAVRLFIEWLKN 20 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999865
No 207
>1jrj_A Exendin-4; Trp-CAGE, GLP-1, poly-proii, hydrophobic cluster, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=24.80 E-value=37 Score=20.36 Aligned_cols=22 Identities=32% Similarity=0.395 Sum_probs=19.4
Q ss_pred hhHHHHHhhhcccHHHHHhhhc
Q 042087 86 SNAMSKIITENASEEFLYSLSN 107 (118)
Q Consensus 86 p~amsk~itenAsEefLysLSN 107 (118)
...+||+..+.|-.+|+.+|-|
T Consensus 7 TsdyS~~l~~~aak~fv~wL~~ 28 (39)
T 1jrj_A 7 TSDLSKQMEEEAVRLFIEWLKN 28 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHc
Confidence 3578999999999999999976
No 208
>2g49_C Glucagon preproprotein; protein-peptide complex, hydrolase; 2.50A {Homo sapiens} PDB: 1kx6_A 1gcn_A 1bh0_A 1nau_A
Probab=24.46 E-value=38 Score=19.06 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=18.5
Q ss_pred hHHHHHhhhcccHHHHHhhhc
Q 042087 87 NAMSKIITENASEEFLYSLSN 107 (118)
Q Consensus 87 ~amsk~itenAsEefLysLSN 107 (118)
..+||...+.|-.+||.+|-|
T Consensus 8 sdysk~l~~~aak~fv~wL~~ 28 (29)
T 2g49_C 8 SDYSKYLDSRRAQDFVQWLMN 28 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 568999999999999999875
No 209
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A*
Probab=24.43 E-value=26 Score=29.11 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=24.9
Q ss_pred hhhhHHHHHHhhhcc----cccccccccccccchhhccc-ccccceeeecch
Q 042087 11 IKISWIKLYLNALHE----SFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDE 57 (118)
Q Consensus 11 ikiswinlyLNal~~----~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~e 57 (118)
-.|.|+.-||.++.+ +|-+ ++|| .|+|+|-+|...
T Consensus 428 ~Ri~Yl~~hl~~~~~Ai~~dGv~------------v~GY~~WSliDnfeW~~ 467 (501)
T 1e4m_M 428 TRIDYLCSHLCFLNKVIKEKDVN------------VKGYLAWALGDNYEFNK 467 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCC------------EEEEEEECSBCCCBTTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC------------eEEEEEcccccccchhc
Confidence 468888888887742 3433 5676 599999998654
No 210
>3dba_A CONE CGMP-specific 3',5'-cyclic phosphodiesterase alpha'; 3', GAF domain, cyclic nucleotide phosphodiesterase hydrolase, lipoprotein, membrane; HET: 35G; 2.57A {Gallus gallus}
Probab=24.37 E-value=12 Score=24.55 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=23.1
Q ss_pred ceeeeccccccCCChh-HHHHHhhhcccHHHHHhhhcccccc
Q 042087 72 EGIVGCRPQVLNPNSN-AMSKIITENASEEFLYSLSNYCGLQ 112 (118)
Q Consensus 72 d~IVGCiPQvLnpnp~-amsk~itenAsEefLysLSNYc~lQ 112 (118)
+.++|.+ ++.|..+. +.+ ..++++|-.++++|++-
T Consensus 135 ~~viGVL-~l~n~~~~~~Ft-----~~d~~lL~~lA~~aa~~ 170 (180)
T 3dba_A 135 KEVLAVV-MALNKLNASEFS-----KEDEEVFKKYLNFISLV 170 (180)
T ss_dssp TEEEEEE-EEEEESSSSSCC-----HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-EEEeCCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 4455554 34444333 454 67899999999999863
No 211
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A
Probab=24.30 E-value=29 Score=28.58 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=26.0
Q ss_pred hhhhHHHHHHhhhcccccccccccccccchhhccc-ccccceeeecchh
Q 042087 11 IKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDES 58 (118)
Q Consensus 11 ikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~eS 58 (118)
-.|.++.-||+++.+- |. ..-.-++|| .|+|+|-+|..+.
T Consensus 397 ~Ri~yl~~hl~~~~~A---i~-----~dGv~v~GY~~WSl~DnfeW~~G 437 (481)
T 3qom_A 397 YRIDYLTDHLRQIKLA---VL-----EDGVDLIGYTPWGCIDLVAASTG 437 (481)
T ss_dssp HHHHHHHHHHHHHHHH---HH-----TTCCCEEEECCBTSBCCCCTTTC
T ss_pred HHHHHHHHHHHHHHHH---HH-----hcCCcEEEEEEeecccccccccC
Confidence 4688999888877310 00 012236777 5999999998653
No 212
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4
Probab=24.16 E-value=27 Score=28.69 Aligned_cols=35 Identities=34% Similarity=0.505 Sum_probs=25.1
Q ss_pred hhhhHHHHHHhhhcc----cccccccccccccchhhccc-ccccceeeecch
Q 042087 11 IKISWIKLYLNALHE----SFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDE 57 (118)
Q Consensus 11 ikiswinlyLNal~~----~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~e 57 (118)
-.|.|+.-||+++.+ +|- -++|| .|+|+|-+|...
T Consensus 387 ~Ri~yl~~hl~~~~~Ai~~dGv------------~v~GY~~WSl~Dn~eW~~ 426 (464)
T 1wcg_A 387 EKISYLKNYLNATLQAMYEDKC------------NVIGYTVWSLLDNFEWFY 426 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC------------CEEEEEEECSBCCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhcCC------------CeEEEEEccccccccccc
Confidence 478888888887742 443 35676 599999998654
No 213
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=23.85 E-value=30 Score=22.56 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=34.0
Q ss_pred HHhhhcccccccccccccccch---hhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHHh
Q 042087 19 YLNALHESFSKLFCHCHCKRSF---VLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKII 93 (118)
Q Consensus 19 yLNal~~~g~~~~d~~~e~kt~---~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~i 93 (118)
++...-+.|.+|+-||..|++- +.-.|| +........|-+.++| .+.|. ..||+.-+..+.
T Consensus 76 ~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayl---m~~~~~~~~~a~~~v~----------~~R~~-~~pn~~f~~qL~ 139 (160)
T 1yz4_A 76 FIHCCRLNGGNCLVHSFAGISRSTTIVTAYV---MTVTGLGWRDVLEAIK----------ATRPI-ANPNPGFRQQLE 139 (160)
T ss_dssp HHHHHHHTTCCEEEEETTSSSHHHHHHHHHH---HHHHCCCHHHHHHHHH----------HTCTT-CCCCHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCchHHHHHHHHH---HHHcCCCHHHHHHHHH----------HHCCC-cCCCHHHHHHHH
Confidence 3444345688999999998651 112332 1222334445555554 34564 478887776553
No 214
>4dde_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: BG6; 1.45A {Streptococcus mutans} PDB: 3pn8_A* 4f66_A* 4gpn_A* 4f79_A*
Probab=23.39 E-value=30 Score=28.45 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=25.8
Q ss_pred hhhhHHHHHHhhhc----ccccccccccccccchhhccc-ccccceeeecchh
Q 042087 11 IKISWIKLYLNALH----ESFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDES 58 (118)
Q Consensus 11 ikiswinlyLNal~----~~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~eS 58 (118)
-.|.++.-||+++. ++| .-++|| .|+++|-+|+.+.
T Consensus 397 ~Ri~Yl~~hl~~~~~Ai~~dG------------v~v~GY~~WSl~DnfeW~~G 437 (480)
T 4dde_A 397 YRIDYLGAHIKEMIKAVDEDG------------VELMGYTPWGCIDLVSAGTG 437 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC------------CCEEEECCBTSBCCCCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcC------------CCEEEEEEeccccccccccC
Confidence 47888888888773 223 236776 5999999998654
No 215
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=23.18 E-value=25 Score=22.44 Aligned_cols=16 Identities=19% Similarity=0.422 Sum_probs=13.1
Q ss_pred cccccccccccccccc
Q 042087 24 HESFSKLFCHCHCKRS 39 (118)
Q Consensus 24 ~~~g~~~~d~~~e~kt 39 (118)
+..+.||+=||..|+.
T Consensus 89 ~~~~~~vlvHC~aG~~ 104 (151)
T 1xri_A 89 DEKNHPVLIHCKRGKH 104 (151)
T ss_dssp CGGGCSEEEECSSSSS
T ss_pred cCCCCCEEEECCCCCC
Confidence 3468899999999874
No 216
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=22.86 E-value=14 Score=23.85 Aligned_cols=18 Identities=22% Similarity=0.265 Sum_probs=14.6
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+.-++
T Consensus 49 v~~vD~s~~~~~~a~~~~ 66 (209)
T 2p8j_A 49 TYGIEISDLQLKKAENFS 66 (209)
T ss_dssp EEEEECCHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHH
Confidence 579999999998876553
No 217
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=22.75 E-value=35 Score=22.72 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=20.6
Q ss_pred ccccccccccccccchhhcccccccceeeecchhhhhhhhccCCcccceeeecc
Q 042087 25 ESFSKLFCHCHCKRSFVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCR 78 (118)
Q Consensus 25 ~~g~~~~d~~~e~kt~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCi 78 (118)
++....+--|.||.. .++.++||... +.||+|-
T Consensus 17 e~~~~y~ypCrCGd~-------------F~it~edL~~g--------e~iv~C~ 49 (83)
T 1yop_A 17 PENQMFTYPCPCGDR-------------FQIYLDDMFEG--------EKVAVCP 49 (83)
T ss_dssp TTTTEEEEEETTTEE-------------EEEEHHHHHTT--------CCEEECS
T ss_pred CCCCEEEEeCCCCCe-------------EEECHHHHhCC--------CEEEECC
Confidence 334444445888866 36778888432 5588884
No 218
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=22.72 E-value=11 Score=25.96 Aligned_cols=12 Identities=8% Similarity=0.600 Sum_probs=10.1
Q ss_pred CcccCCCCcchh
Q 042087 1 VYGLDINPRAIK 12 (118)
Q Consensus 1 VyGlDiNPrAik 12 (118)
|+|+|++|++++
T Consensus 84 V~gvD~s~~~l~ 95 (210)
T 1nt2_A 84 IYAVEYSAKPFE 95 (210)
T ss_dssp EEEECCCHHHHH
T ss_pred EEEEECCHHHHH
Confidence 689999998764
No 219
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=22.58 E-value=12 Score=27.73 Aligned_cols=17 Identities=18% Similarity=0.093 Sum_probs=14.6
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|.|+||+|.+|++|--.
T Consensus 74 v~GiD~S~~~l~~A~~~ 90 (302)
T 2vdw_A 74 LVATDPDADAIARGNER 90 (302)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHH
Confidence 67999999999998753
No 220
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=22.19 E-value=47 Score=20.91 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=31.6
Q ss_pred Hhhhcccccccccccccccc--hhh-cccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHH
Q 042087 20 LNALHESFSKLFCHCHCKRS--FVL-RGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSK 91 (118)
Q Consensus 20 LNal~~~g~~~~d~~~e~kt--~~~-~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk 91 (118)
+......|.+|+=||..|++ -++ -.| |+.+-.....|.++..|. ..|++ .||+.-+..
T Consensus 82 i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~---l~~~~~~~~~~a~~~v~~----------~R~~~-~~~~~~~~~ 142 (157)
T 3rgo_A 82 ALKYQALGQCVYVHCKAGRSRSATMVAAY---LIQVHNWSPEEAIEAIAK----------IRSHI-SIRPSQLEV 142 (157)
T ss_dssp HHHHHHTTCEEEEESSSSSSHHHHHHHHH---HHHHHTCCHHHHHHHHHH----------HSTTC-CCCHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCChHHHHHHHH---HHHHcCCCHHHHHHHHHH----------HCCCC-CCCHHHHHH
Confidence 33333567899999998874 111 122 222233455566666654 34553 477766553
No 221
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A*
Probab=21.95 E-value=34 Score=28.32 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=24.1
Q ss_pred hhhhHHHHHHhhhc----ccccccccccccccchhhccc-ccccceeeecch
Q 042087 11 IKISWIKLYLNALH----ESFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDE 57 (118)
Q Consensus 11 ikiswinlyLNal~----~~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~e 57 (118)
-.|.++.-||+++. ++|- -++|| .|+++|-+|..+
T Consensus 396 ~Ri~Yl~~hl~~~~~Ai~~dGv------------~v~GY~~WSl~DnfeW~~ 435 (487)
T 3vii_A 396 GRVHYYTEHLKEMLKAIHEDGV------------NVIGYTAWSLMDNFEWLR 435 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC------------CEEEEEEECSBCCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHcCC------------eEEEEEEeeccccchhhc
Confidence 46778888887662 2332 36676 599999998754
No 222
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=21.95 E-value=37 Score=21.61 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=31.4
Q ss_pred ccccccccccccccc--h-hhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHH
Q 042087 25 ESFSKLFCHCHCKRS--F-VLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKI 92 (118)
Q Consensus 25 ~~g~~~~d~~~e~kt--~-~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~ 92 (118)
+.+.+|+-||..|++ - +.-.|| +........|-+.+.|. ++| | .||+.-|..+
T Consensus 83 ~~~~~vlVHC~aG~~RSg~~~~ayl---~~~~~~~~~~a~~~v~~----------~R~-i-~pn~~f~~qL 138 (151)
T 2e0t_A 83 QPGGKILVHCAVGVSRSATLVLAYL---MLYHHLTLVEAIKKVKD----------HRG-I-IPNRGFLRQL 138 (151)
T ss_dssp STTCCEEEECSSSSHHHHHHHHHHH---HHHSCCCHHHHHHHHHH----------TSC-S-CCCHHHHHHH
T ss_pred cCCCcEEEECCCCCChHHHHHHHHH---HHHcCCCHHHHHHHHHH----------cCC-C-CCCHHHHHHH
Confidence 368899999999864 1 222332 22233455666666654 355 3 7887665544
No 223
>1z8u_A Alpha-hemoglobin stabilizing protein; alpha haemoglobin, AHSP, oxidation, interaction, electron transport; HET: HEM; 2.40A {Homo sapiens} SCOP: a.7.11.1 PDB: 1y01_A* 1w0b_A 3ovu_A* 1w09_A 1w0a_A 3ia3_A* 1xzy_A
Probab=21.89 E-value=29 Score=24.80 Aligned_cols=11 Identities=27% Similarity=0.893 Sum_probs=9.3
Q ss_pred hhHHHHHHhhh
Q 042087 13 ISWIKLYLNAL 23 (118)
Q Consensus 13 iswinlyLNal 23 (118)
=.|+|.|+|-.
T Consensus 42 ~DWvnfYinyy 52 (102)
T 1z8u_A 42 EDWMNFYINYY 52 (102)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 47999999976
No 224
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=21.83 E-value=19 Score=25.62 Aligned_cols=15 Identities=27% Similarity=0.512 Sum_probs=12.5
Q ss_pred CcccCCCCcchhhhH
Q 042087 1 VYGLDINPRAIKISW 15 (118)
Q Consensus 1 VyGlDiNPrAikisw 15 (118)
|+|+|++|.++..+-
T Consensus 63 V~gvDis~~ml~~a~ 77 (232)
T 3opn_A 63 VYALDVGTNQLAWKI 77 (232)
T ss_dssp EEEECSSCCCCCHHH
T ss_pred EEEEcCCHHHHHHHH
Confidence 689999999988643
No 225
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=21.82 E-value=16 Score=23.89 Aligned_cols=19 Identities=26% Similarity=0.261 Sum_probs=15.4
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|.++..+.-|+=
T Consensus 63 v~~vD~s~~~~~~a~~~~~ 81 (227)
T 1ve3_A 63 VVGVDISEDMIRKAREYAK 81 (227)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999999998876653
No 226
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=21.66 E-value=12 Score=24.43 Aligned_cols=16 Identities=13% Similarity=0.042 Sum_probs=11.6
Q ss_pred CcccCCCCcchhhhHH
Q 042087 1 VYGLDINPRAIKISWI 16 (118)
Q Consensus 1 VyGlDiNPrAikiswi 16 (118)
|+|+|++|.+++.+--
T Consensus 67 v~gvD~s~~~~~~a~~ 82 (250)
T 2p7i_A 67 ITCVEASEEAISHAQG 82 (250)
T ss_dssp EEEEESCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHH
Confidence 5788998888766543
No 227
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=21.63 E-value=13 Score=23.78 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=13.8
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+--|
T Consensus 68 v~~~D~s~~~~~~a~~~ 84 (215)
T 2pxx_A 68 VTSVDYSSVVVAAMQAC 84 (215)
T ss_dssp EEEEESCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHh
Confidence 57899999999887654
No 228
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=21.61 E-value=36 Score=22.40 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=33.2
Q ss_pred HHhhhcccccccccccccccc--h-hhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHHh
Q 042087 19 YLNALHESFSKLFCHCHCKRS--F-VLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKII 93 (118)
Q Consensus 19 yLNal~~~g~~~~d~~~e~kt--~-~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~i 93 (118)
+++..-+.|.+|+-||..|++ - +.-.|| +........+-+.+.| .++|. ..||+.-+..+.
T Consensus 75 fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayL---m~~~~~~~~~A~~~v~----------~~R~~-~~pn~~f~~qL~ 138 (165)
T 1wrm_A 75 FIHECRLRGESCLVHCLAGVSRSVTLVIAYI---MTVTDFGWEDALHTVR----------AGRSC-ANPNVGFQRQLQ 138 (165)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHH---HHTSSCCHHHHHHHHH----------HHCTT-CCCCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEECCCCCChhHHHHHHHH---HHHcCCCHHHHHHHHH----------HHCCC-cCCCHhHHHHHH
Confidence 344434578899999999865 1 112332 1222233445555543 34564 468887666543
No 229
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=21.44 E-value=19 Score=23.82 Aligned_cols=19 Identities=16% Similarity=0.207 Sum_probs=15.2
Q ss_pred CcccCCCCcchhhhHHHHH
Q 042087 1 VYGLDINPRAIKISWIKLY 19 (118)
Q Consensus 1 VyGlDiNPrAikiswinly 19 (118)
|+|+|++|..++.+.-|+=
T Consensus 86 v~~vD~~~~~~~~a~~~~~ 104 (223)
T 3duw_A 86 VVTLEASEKHADIARSNIE 104 (223)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHH
Confidence 5789999999988776653
No 230
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=21.33 E-value=12 Score=25.07 Aligned_cols=18 Identities=33% Similarity=0.468 Sum_probs=14.7
Q ss_pred CcccCCCCcchhhhHHHH
Q 042087 1 VYGLDINPRAIKISWIKL 18 (118)
Q Consensus 1 VyGlDiNPrAikiswinl 18 (118)
|+|+|++|.+++.+--++
T Consensus 81 v~gvD~s~~~~~~a~~~~ 98 (245)
T 3ggd_A 81 VIGLDVSKSALEIAAKEN 98 (245)
T ss_dssp EEEEESCHHHHHHHHHHS
T ss_pred EEEEECCHHHHHHHHHhC
Confidence 579999999998876554
No 231
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=21.33 E-value=12 Score=24.99 Aligned_cols=16 Identities=6% Similarity=-0.170 Sum_probs=13.1
Q ss_pred CcccCCCCcchhhhHH
Q 042087 1 VYGLDINPRAIKISWI 16 (118)
Q Consensus 1 VyGlDiNPrAikiswi 16 (118)
|+|+|++|.+++.+--
T Consensus 82 v~gvD~s~~~l~~a~~ 97 (265)
T 2i62_A 82 IIVSDYTDQNLWELQK 97 (265)
T ss_dssp EEEEESCHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHH
Confidence 5799999999887743
No 232
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=21.23 E-value=37 Score=22.79 Aligned_cols=61 Identities=23% Similarity=0.469 Sum_probs=33.0
Q ss_pred HHHhhhcccccccccccccccc---hhhcccccccceeeecchhhhhhhhccCCcccceeeeccccccCCChhHHHHH
Q 042087 18 LYLNALHESFSKLFCHCHCKRS---FVLRGYLWGYERRVEFDESDLLAYCRHHDIQLEGIVGCRPQVLNPNSNAMSKI 92 (118)
Q Consensus 18 lyLNal~~~g~~~~d~~~e~kt---~~~~~~~~~l~~RveF~eSDLL~ycr~~~i~ld~IVGCiPQvLnpnp~amsk~ 92 (118)
-+++..-+.|.+|+-||..|++ .+.-.|| ..+......+-+.++|. ++|+ ..||+.-+..+
T Consensus 78 ~~i~~~~~~~~~VlVHC~aG~~RSg~~v~ayL---m~~~~~~~~~A~~~v~~----------~Rp~-~~pn~~f~~qL 141 (177)
T 2oud_A 78 EFIEEAHQCGKGLLIHCQAGVSRSATIVIAYL---MKHTRMTMTDAYKFVKG----------KRPI-ISPNLNFMGQL 141 (177)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH---HHTSCCCHHHHHHHHHH----------HCTT-CCCCHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEcCCCCCchHHHHHHHH---HHHcCCCHHHHHHHHHH----------HCCC-cCCCHHHHHHH
Confidence 3444444578899999998865 1112232 22223344455555543 4454 36777666544
No 233
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=21.05 E-value=23 Score=28.80 Aligned_cols=23 Identities=0% Similarity=-0.041 Sum_probs=18.5
Q ss_pred CcccCCCCcchhhhHHHHHHhhh
Q 042087 1 VYGLDINPRAIKISWIKLYLNAL 23 (118)
Q Consensus 1 VyGlDiNPrAikiswinlyLNal 23 (118)
|+++||+|.+++++--|+=-+++
T Consensus 129 V~AvDis~~~l~~a~~n~~r~G~ 151 (464)
T 3m6w_A 129 LLANEVDGKRVRGLLENVERWGA 151 (464)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 57899999999998888755544
No 234
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=21.01 E-value=48 Score=20.70 Aligned_cols=15 Identities=13% Similarity=0.053 Sum_probs=12.4
Q ss_pred ccccccccccccccc
Q 042087 25 ESFSKLFCHCHCKRS 39 (118)
Q Consensus 25 ~~g~~~~d~~~e~kt 39 (118)
..|.+++=||..|++
T Consensus 86 ~~~~~vlVHC~~G~~ 100 (150)
T 4erc_A 86 ARGEAVGVHCALGFG 100 (150)
T ss_dssp HTTCEEEEECSSSSH
T ss_pred HCCCCEEEECCCCCC
Confidence 467899999999874
No 235
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=20.69 E-value=15 Score=25.69 Aligned_cols=15 Identities=7% Similarity=-0.294 Sum_probs=12.5
Q ss_pred CcccCCCCcchhhhH
Q 042087 1 VYGLDINPRAIKISW 15 (118)
Q Consensus 1 VyGlDiNPrAikisw 15 (118)
|+|+||+|.++..+-
T Consensus 97 v~gvD~s~~~l~~a~ 111 (289)
T 2g72_A 97 ITMTDFLEVNRQELG 111 (289)
T ss_dssp EEEECSCHHHHHHHH
T ss_pred EEEeCCCHHHHHHHH
Confidence 689999999998653
No 236
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}
Probab=20.54 E-value=28 Score=26.36 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=23.3
Q ss_pred hhhhhhccCCcccceeeeccccccCCCh
Q 042087 59 DLLAYCRHHDIQLEGIVGCRPQVLNPNS 86 (118)
Q Consensus 59 DLL~ycr~~~i~ld~IVGCiPQvLnpnp 86 (118)
.++..++.+|++.=.++|+.|+-+.+.+
T Consensus 88 ~~~d~~~~~G~~p~~~l~~~P~~~~~~~ 115 (500)
T 4ekj_A 88 QLYDALLAKGIKPFIELGFTPEAMKTSD 115 (500)
T ss_dssp HHHHHHHHTTCEEEEEECCBCGGGCSSC
T ss_pred HHHHHHHHCCCEEEEEEeCCchhhcCCC
Confidence 3688999999999999999998876543
No 237
>1l3l_A Transcriptional activator protein TRAR; helix-turn-helix DNA binding motif, alpha/beta/alpha sandwich; HET: LAE; 1.66A {Agrobacterium tumefaciens} SCOP: a.4.6.2 d.110.5.1 PDB: 1h0m_A*
Probab=20.52 E-value=21 Score=24.87 Aligned_cols=54 Identities=15% Similarity=0.334 Sum_probs=37.3
Q ss_pred hhHHHHHHhhhcccccccccccccccchhhcccccccceee---ecchhhhhhhhccCCcc
Q 042087 13 ISWIKLYLNALHESFSKLFCHCHCKRSFVLRGYLWGYERRV---EFDESDLLAYCRHHDIQ 70 (118)
Q Consensus 13 iswinlyLNal~~~g~~~~d~~~e~kt~~~~~~~~~l~~Rv---eF~eSDLL~ycr~~~i~ 70 (118)
-.|...|+..---.--|++.+|..... ...|...... ++..+.++..++++|+.
T Consensus 55 ~~w~~~Y~~~~y~~~DPv~~~~~~~~~----p~~w~~~~~~~~~~~~~~~~~~~a~~~gl~ 111 (234)
T 1l3l_A 55 RQWQSTYFDKKFEALDPVVKRARSRKH----IFTWSGEHERPTLSKDERAFYDHASDFGIR 111 (234)
T ss_dssp HHHHHHHHHTTGGGTCHHHHHHHHCCS----CEEEEHHHHTTTCCHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHCCCcccCcHHHHhhCCCC----CeeeCccccccccchHHHHHHHHHHHcCCC
Confidence 489999987554445688887765543 5667654433 35677888888999885
No 238
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=20.31 E-value=15 Score=24.01 Aligned_cols=17 Identities=29% Similarity=0.368 Sum_probs=13.5
Q ss_pred CcccCCCCcchhhhHHH
Q 042087 1 VYGLDINPRAIKISWIK 17 (118)
Q Consensus 1 VyGlDiNPrAikiswin 17 (118)
|+|+|++|.+++.+--+
T Consensus 70 v~~vD~s~~~~~~a~~~ 86 (220)
T 3hnr_A 70 VYGIEPSREMRMIAKEK 86 (220)
T ss_dssp EEEECSCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHh
Confidence 57999999988876544
No 239
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A*
Probab=20.06 E-value=38 Score=27.78 Aligned_cols=39 Identities=23% Similarity=0.439 Sum_probs=25.3
Q ss_pred hhhhHHHHHHhhhcccccccccccccccchhhccc-ccccceeeecch
Q 042087 11 IKISWIKLYLNALHESFSKLFCHCHCKRSFVLRGY-LWGYERRVEFDE 57 (118)
Q Consensus 11 ikiswinlyLNal~~~g~~~~d~~~e~kt~~~~~~-~~~l~~RveF~e 57 (118)
-.|.|+.-||.++.+- | +....-++|| .|+++|-+|...
T Consensus 389 ~Ri~yl~~hl~~~~~A---i-----~~dGv~v~GY~~WSl~Dn~eW~~ 428 (465)
T 2e3z_A 389 DRQAYYRDYTEALLQA---V-----TEDGADVRGYFGWSLLDNFEWAE 428 (465)
T ss_dssp HHHHHHHHHHHHHHHH---H-----HTTCCCEEEEEEECSSCCCCGGG
T ss_pred HHHHHHHHHHHHHHHH---H-----HhcCCcEEEEEecccccccchhc
Confidence 4688899998877310 1 0112336777 599999998654
Done!