Query 042088
Match_columns 286
No_of_seqs 191 out of 1177
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 02:45:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042088.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042088hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 100.0 6.6E-69 1.4E-73 504.9 25.6 276 4-279 13-353 (357)
2 PLN02947 oxidoreductase 100.0 5.7E-69 1.2E-73 507.5 23.9 275 5-279 25-367 (374)
3 PLN02904 oxidoreductase 100.0 1.2E-68 2.6E-73 502.9 24.3 275 4-279 12-350 (357)
4 PLN02912 oxidoreductase, 2OG-F 100.0 1.5E-68 3.2E-73 501.0 24.3 275 5-279 5-341 (348)
5 PLN02758 oxidoreductase, 2OG-F 100.0 1.6E-68 3.5E-73 503.0 24.1 274 6-279 15-355 (361)
6 PLN02639 oxidoreductase, 2OG-F 100.0 2.6E-67 5.7E-72 491.0 24.7 266 11-279 5-333 (337)
7 PLN03178 leucoanthocyanidin di 100.0 2.8E-67 6E-72 494.7 24.9 275 4-278 4-353 (360)
8 PLN02393 leucoanthocyanidin di 100.0 5.2E-67 1.1E-71 493.0 24.8 277 3-279 10-356 (362)
9 PLN02254 gibberellin 3-beta-di 100.0 9.1E-67 2E-71 490.2 23.1 259 14-278 26-352 (358)
10 PLN02515 naringenin,2-oxogluta 100.0 1.3E-65 2.8E-70 482.4 24.9 259 14-273 11-332 (358)
11 PLN02704 flavonol synthase 100.0 1.8E-65 3.9E-70 478.3 24.5 261 7-270 5-332 (335)
12 PLN02276 gibberellin 20-oxidas 100.0 2.5E-65 5.5E-70 481.4 24.0 263 15-279 17-348 (361)
13 PLN02750 oxidoreductase, 2OG-F 100.0 4E-65 8.6E-70 477.7 25.1 258 16-273 2-331 (345)
14 PLN00417 oxidoreductase, 2OG-F 100.0 1.4E-63 2.9E-68 467.4 25.0 269 8-278 9-343 (348)
15 PLN02997 flavonol synthase 100.0 4.9E-63 1.1E-67 459.6 24.4 232 37-271 29-317 (325)
16 PLN02299 1-aminocyclopropane-1 100.0 9.9E-63 2.1E-67 457.0 23.2 239 37-275 3-299 (321)
17 PTZ00273 oxidase reductase; Pr 100.0 3.2E-62 7E-67 454.0 20.7 236 37-273 2-314 (320)
18 KOG0143 Iron/ascorbate family 100.0 1.9E-61 4.2E-66 447.8 23.0 241 37-277 14-317 (322)
19 PLN02403 aminocyclopropanecarb 100.0 5.6E-61 1.2E-65 441.7 23.1 235 40-278 2-291 (303)
20 PLN02485 oxidoreductase 100.0 4.6E-61 9.9E-66 447.9 21.8 236 38-273 5-328 (329)
21 PLN02156 gibberellin 2-beta-di 100.0 9.1E-61 2E-65 445.7 23.6 230 38-273 24-317 (335)
22 PLN02365 2-oxoglutarate-depend 100.0 2.8E-60 6E-65 437.3 22.3 234 38-280 3-295 (300)
23 PLN03002 oxidoreductase, 2OG-F 100.0 2.6E-60 5.6E-65 443.0 21.9 235 37-275 11-325 (332)
24 COG3491 PcbC Isopenicillin N s 100.0 1.4E-58 3E-63 414.9 19.2 213 37-250 2-285 (322)
25 PLN02984 oxidoreductase, 2OG-F 100.0 2.1E-57 4.5E-62 424.1 21.8 223 38-274 36-328 (341)
26 PLN03001 oxidoreductase, 2OG-F 100.0 8E-50 1.7E-54 360.8 16.1 167 112-278 64-257 (262)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 9E-26 1.9E-30 174.3 9.1 95 140-237 2-98 (98)
28 PLN03176 flavanone-3-hydroxyla 99.8 6.4E-19 1.4E-23 141.4 10.6 99 5-104 3-103 (120)
29 PF14226 DIOX_N: non-haem diox 99.6 3.7E-16 8.1E-21 123.9 4.4 63 41-104 1-63 (116)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.6 0.0019 4.1E-08 49.3 3.1 78 142-236 1-100 (100)
31 PF12851 Tet_JBP: Oxygenase do 91.8 0.55 1.2E-05 39.9 6.4 67 158-236 86-170 (171)
32 smart00702 P4Hc Prolyl 4-hydro 91.4 0.88 1.9E-05 38.3 7.3 81 140-236 83-178 (178)
33 PRK05467 Fe(II)-dependent oxyg 88.2 2.9 6.2E-05 37.2 8.2 47 177-236 130-177 (226)
34 PF13759 2OG-FeII_Oxy_5: Putat 75.0 5.2 0.00011 30.4 4.2 37 185-233 63-100 (101)
35 PF07350 DUF1479: Protein of u 74.6 2.7 5.8E-05 40.7 2.9 55 37-95 46-100 (416)
36 PF13532 2OG-FeII_Oxy_2: 2OG-F 72.6 8 0.00017 32.7 5.2 85 140-233 97-193 (194)
37 PRK15401 alpha-ketoglutarate-d 69.1 26 0.00056 30.9 7.6 77 140-233 116-210 (213)
38 PRK08333 L-fuculose phosphate 66.7 7.7 0.00017 33.0 3.8 36 40-78 120-155 (184)
39 TIGR02466 conserved hypothetic 66.5 13 0.00028 32.4 5.2 38 185-234 159-197 (201)
40 PRK08130 putative aldolase; Va 63.9 9.7 0.00021 33.2 4.0 36 40-78 127-162 (213)
41 TIGR02409 carnitine_bodg gamma 57.8 16 0.00034 34.6 4.6 51 38-93 107-157 (366)
42 PRK05874 L-fuculose-phosphate 53.1 17 0.00037 31.9 3.7 37 40-79 127-163 (217)
43 COG2140 Thermophilic glucose-6 48.8 32 0.0007 30.2 4.6 66 140-210 90-158 (209)
44 PRK08660 L-fuculose phosphate 46.7 28 0.0006 29.4 3.9 35 40-78 115-149 (181)
45 PRK08087 L-fuculose phosphate 46.6 37 0.00081 29.6 4.8 37 40-79 122-158 (215)
46 PF00596 Aldolase_II: Class II 45.7 12 0.00027 31.5 1.6 37 39-78 122-159 (184)
47 PRK06833 L-fuculose phosphate 45.4 26 0.00056 30.6 3.6 37 40-79 124-160 (214)
48 PRK03634 rhamnulose-1-phosphat 40.5 34 0.00073 31.2 3.7 37 40-79 179-215 (274)
49 TIGR01086 fucA L-fuculose phos 39.8 34 0.00073 29.8 3.5 36 40-78 121-156 (214)
50 PRK06557 L-ribulose-5-phosphat 39.1 31 0.00068 30.1 3.2 38 39-79 129-168 (221)
51 TIGR03328 salvage_mtnB methylt 38.2 39 0.00085 28.9 3.6 35 40-78 126-163 (193)
52 PF01471 PG_binding_1: Putativ 36.5 41 0.00089 22.3 2.8 43 56-98 3-45 (57)
53 PRK06357 hypothetical protein; 36.3 51 0.0011 28.9 4.1 37 40-79 130-172 (216)
54 PRK06755 hypothetical protein; 36.2 44 0.00095 29.2 3.6 37 40-79 136-172 (209)
55 PRK06754 mtnB methylthioribulo 34.8 39 0.00085 29.3 3.1 35 40-78 137-172 (208)
56 TIGR02410 carnitine_TMLD trime 33.6 60 0.0013 30.7 4.3 52 39-94 99-150 (362)
57 TIGR02624 rhamnu_1P_ald rhamnu 33.4 67 0.0015 29.3 4.4 36 40-78 177-212 (270)
58 PRK09553 tauD taurine dioxygen 30.8 91 0.002 28.2 4.9 52 38-95 13-64 (277)
59 PRK06661 hypothetical protein; 29.2 62 0.0013 28.6 3.4 39 40-79 123-161 (231)
60 cd00379 Ribosomal_L10_P0 Ribos 28.9 1.8E+02 0.0038 23.5 5.9 39 54-92 3-42 (155)
61 cd00398 Aldolase_II Class II A 26.3 50 0.0011 28.5 2.3 40 39-79 121-160 (209)
62 PRK05834 hypothetical protein; 25.4 1E+02 0.0022 26.5 4.0 38 40-78 121-160 (194)
63 PRK07490 hypothetical protein; 25.2 77 0.0017 28.3 3.3 36 40-78 133-169 (245)
64 COG0289 DapB Dihydrodipicolina 24.4 2E+02 0.0044 26.3 5.8 44 43-92 73-117 (266)
65 PRK09220 methylthioribulose-1- 23.7 96 0.0021 26.8 3.5 25 54-78 144-171 (204)
66 PF01113 DapB_N: Dihydrodipico 23.2 1.3E+02 0.0027 23.7 3.9 45 42-92 70-115 (124)
67 PF05118 Asp_Arg_Hydrox: Aspar 23.2 1.1E+02 0.0024 25.4 3.7 61 157-233 91-157 (163)
68 TIGR00568 alkb DNA alkylation 23.1 2E+02 0.0042 24.3 5.2 59 140-204 95-162 (169)
69 cd05797 Ribosomal_L10 Ribosoma 21.3 2.9E+02 0.0062 22.5 5.8 39 54-92 5-44 (157)
70 COG1402 Uncharacterized protei 20.3 2.6E+02 0.0057 25.2 5.7 41 54-94 88-131 (250)
71 cd05796 Ribosomal_P0_like Ribo 20.2 2.5E+02 0.0054 23.3 5.3 39 54-92 3-42 (163)
72 PRK15331 chaperone protein Sic 20.1 98 0.0021 26.2 2.7 45 53-98 8-52 (165)
No 1
>PLN02216 protein SRG1
Probab=100.00 E-value=6.6e-69 Score=504.90 Aligned_cols=276 Identities=29% Similarity=0.519 Sum_probs=239.5
Q ss_pred CchhHHHHhc--cCCCCCCcccCCCCCCCCCCC-CCCCCCCceEeCCCCCCC-ChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 4 PNSLVFNVAS--SVSSIPSNYIRPASNRPNLDG-VYLDDCIPQIDLRYLNGS-NRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 4 ~~~~v~~~~~--~~~~ip~~~~~p~~~~~~~~~-~~~~~~iPvIDls~l~~~-~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
+...|+.+++ ++++||++|++|.++++.+.. .....+||+|||+.+.++ .+.+++++|.+||++||||||+||||+
T Consensus 13 ~~~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~ 92 (357)
T PLN02216 13 IVPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGID 92 (357)
T ss_pred cchhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCC
Confidence 4466899976 689999999999998875311 112358999999998654 345789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhhhc---------cC----------------------CCccc-cCcCCCCCccc-----
Q 042088 80 EEVMDKMLCLSRQFFHFPEDYVRLH---------CY----------------------PLEDY-MHEWATNPQSF----- 122 (286)
Q Consensus 80 ~~~~~~~~~~~~~fF~Lp~e~~~~~---------~~----------------------p~~~~-~~~WP~~~~~f----- 122 (286)
.++++++++.+++||+||.|.|... |. |...+ +|.||+.+++|
T Consensus 93 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~ 172 (357)
T PLN02216 93 SSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLE 172 (357)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHHHHH
Confidence 9999999999999999999655431 10 11111 67899877777
Q ss_pred -------------------cCCCCCChhHHhhcC-CCccceeeccCCCCCCCcccCcccccCCCcEEEEec-CCCCCeEE
Q 042088 123 -------------------SLGLERDYPIKALGN-HGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQ-DDVPGLQV 181 (286)
Q Consensus 123 -------------------~Lgl~~~~~~~~~~~-~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~q-d~~~GLqV 181 (286)
+||+++++|.+.+.. ..+.||+||||||+.++..+|+++|||+|+||||+| ++++||||
T Consensus 173 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV 252 (357)
T PLN02216 173 TYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQI 252 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeE
Confidence 899999999998875 457899999999999888999999999999999999 57999999
Q ss_pred EECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCc
Q 042088 182 LINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPT 258 (286)
Q Consensus 182 ~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~ 258 (286)
+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||+.|+.|++|+|++++++++ .|+++
T Consensus 253 ~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~ 332 (357)
T PLN02216 253 KKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSL 332 (357)
T ss_pred EECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999988888999999999999999999999998765 68999
Q ss_pred cHHHHHHHHHhccCCCchhhh
Q 042088 259 TGTLHIASTTRNSGTGDLQLK 279 (286)
Q Consensus 259 t~~e~~~~~~~~~~~~~~~~~ 279 (286)
|++||+..++.+...++..|.
T Consensus 333 t~~ey~~~~~~~~~~~~~~~~ 353 (357)
T PLN02216 333 TTKEYFDGLFSRELDGKAYLD 353 (357)
T ss_pred CHHHHHHHHHhcccCCcchhh
Confidence 999999999999888877663
No 2
>PLN02947 oxidoreductase
Probab=100.00 E-value=5.7e-69 Score=507.48 Aligned_cols=275 Identities=37% Similarity=0.678 Sum_probs=239.4
Q ss_pred chhHHHHhc-cCCCCCCcccCCCCCCCCCCCC-----CCCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 5 NSLVFNVAS-SVSSIPSNYIRPASNRPNLDGV-----YLDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 5 ~~~v~~~~~-~~~~ip~~~~~p~~~~~~~~~~-----~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
..+|+.+++ ++.+||++|++|+++++..... ....+||+|||+.+.+.++.+++++|.+||++||||||+||||
T Consensus 25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 104 (374)
T PLN02947 25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGV 104 (374)
T ss_pred ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCC
Confidence 367999999 8999999999999888753110 1445899999999864457789999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCChhhhhhc----------cC----------------------CCccccCcCCCCCccc----
Q 042088 79 PEEVMDKMLCLSRQFFHFPEDYVRLH----------CY----------------------PLEDYMHEWATNPQSF---- 122 (286)
Q Consensus 79 ~~~~~~~~~~~~~~fF~Lp~e~~~~~----------~~----------------------p~~~~~~~WP~~~~~f---- 122 (286)
+.++++++++.+++||+||.|.|... |. |.....|.||+.+++|
T Consensus 105 p~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr~~~ 184 (374)
T PLN02947 105 PSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVA 184 (374)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeecCCcccccccCccchHHHHHHH
Confidence 99999999999999999999654321 10 1011146899877777
Q ss_pred --------------------cCCCC---CChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCe
Q 042088 123 --------------------SLGLE---RDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGL 179 (286)
Q Consensus 123 --------------------~Lgl~---~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GL 179 (286)
+||++ .++|.+.+....+.+|+||||||++++..+|+++|||+|+||||+||+++||
T Consensus 185 ~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~GL 264 (374)
T PLN02947 185 ATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEGL 264 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCCe
Confidence 89996 3467777766778999999999999988999999999999999999999999
Q ss_pred EEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCC
Q 042088 180 QVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LIL 256 (286)
Q Consensus 180 qV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~ 256 (286)
||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||+.|+.|++|+|++++++++ .|+
T Consensus 265 QV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~ 344 (374)
T PLN02947 265 QIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYM 344 (374)
T ss_pred eEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999875 689
Q ss_pred CccHHHHHHHHHhccCCCchhhh
Q 042088 257 PTTGTLHIASTTRNSGTGDLQLK 279 (286)
Q Consensus 257 ~~t~~e~~~~~~~~~~~~~~~~~ 279 (286)
++|++||+.....+...++..|.
T Consensus 345 ~~~~~ey~~~~~~~~~~~~~~l~ 367 (374)
T PLN02947 345 DTDFATFLAYLASAEGKHKNFLE 367 (374)
T ss_pred CCCHHHHHHHHHHhccCchhhhh
Confidence 99999999999888888777664
No 3
>PLN02904 oxidoreductase
Probab=100.00 E-value=1.2e-68 Score=502.93 Aligned_cols=275 Identities=33% Similarity=0.579 Sum_probs=241.0
Q ss_pred CchhHHHHhc-cCCCCCCcccCCCCCCCCCCCC--CCCCCCceEeCCCCCCC-ChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 4 PNSLVFNVAS-SVSSIPSNYIRPASNRPNLDGV--YLDDCIPQIDLRYLNGS-NRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 4 ~~~~v~~~~~-~~~~ip~~~~~p~~~~~~~~~~--~~~~~iPvIDls~l~~~-~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
..+||+.+++ ++.+||+.|++|.++++..... ....+||+|||+.+.++ .+.+++++|.+||++||||||+||||+
T Consensus 12 ~~~~~~~l~~~~~~~vp~~~~~~~~~~p~~~~~~~~~~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~ 91 (357)
T PLN02904 12 SFTSAMTLTNSGVPHVPDRYVLPPSQRPMLGSSIGTSTITLPVIDLSLLHDPLLRSCVIHEIEMACKGFGFFQVINHGIP 91 (357)
T ss_pred cccchHHHHhcCCCCCCHHhCCCchhcccccccccccCCCCCEEECcccCCchhHHHHHHHHHHHHHHCceEEEEeCCCC
Confidence 3579999999 8999999999999998754111 13368999999988654 467789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhhhcc----------C----------------------CCccccCcCCCCCccc-----
Q 042088 80 EEVMDKMLCLSRQFFHFPEDYVRLHC----------Y----------------------PLEDYMHEWATNPQSF----- 122 (286)
Q Consensus 80 ~~~~~~~~~~~~~fF~Lp~e~~~~~~----------~----------------------p~~~~~~~WP~~~~~f----- 122 (286)
.++++++++.+++||+||.|.|.... . |....+|.||+.+++|
T Consensus 92 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~p~~~~~n~WP~~~p~fr~~~~ 171 (357)
T PLN02904 92 SSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYGTSLNHSTDRVHYWRDFIKHYSHPLSKWINLWPSNPPCYKEKVG 171 (357)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCcccccccccccCCCCCCceEEeeeccCCcccccccCcccchHHHHHHH
Confidence 99999999999999999996654311 0 0000147899877777
Q ss_pred -------------------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEE-
Q 042088 123 -------------------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVL- 182 (286)
Q Consensus 123 -------------------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~- 182 (286)
+||+++++|.+.+....+.||++|||||+.++..+|+++|||+|+||||+|+ .+||||+
T Consensus 172 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~ 250 (357)
T PLN02904 172 KYAEATHVLHKQLIEAISESLGLEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS-SQGLQIMD 250 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-CCeeeEEe
Confidence 8999999999988877789999999999988889999999999999999997 5999999
Q ss_pred ECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCcc
Q 042088 183 INGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTT 259 (286)
Q Consensus 183 ~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t 259 (286)
++|+|++|+|.||++|||+||+||+||||+||||+|||+.++..+|||++||+.|+.|+.|+|++++++++ +|+++|
T Consensus 251 ~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~ 330 (357)
T PLN02904 251 CNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFS 330 (357)
T ss_pred CCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCC
Confidence 57999999999999999999999999999999999999998888999999999999999999999998865 689999
Q ss_pred HHHHHHHHHhccCCCchhhh
Q 042088 260 GTLHIASTTRNSGTGDLQLK 279 (286)
Q Consensus 260 ~~e~~~~~~~~~~~~~~~~~ 279 (286)
++||+..++.+...++..|.
T Consensus 331 ~~ey~~~~~~~~~~~~~~~~ 350 (357)
T PLN02904 331 FNDFLDYISSNDITQERFID 350 (357)
T ss_pred HHHHHHHHHhcccCcchHHH
Confidence 99999999999998877764
No 4
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.5e-68 Score=500.95 Aligned_cols=275 Identities=54% Similarity=0.921 Sum_probs=241.2
Q ss_pred chhHHHHhccCCCCCCcccCCCCCCCCCCCC-CCCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHH
Q 042088 5 NSLVFNVASSVSSIPSNYIRPASNRPNLDGV-YLDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVM 83 (286)
Q Consensus 5 ~~~v~~~~~~~~~ip~~~~~p~~~~~~~~~~-~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~ 83 (286)
+-.||++..++.+||+.|++|.++++..... .+..+||+|||+.+.+.++.+++++|.+||++||||||+||||+.+++
T Consensus 5 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~ 84 (348)
T PLN02912 5 KLLVSDIASVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGVPEETI 84 (348)
T ss_pred hhHHHHHhcCCCCCCHHhcCCchhccccccccccCCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHH
Confidence 4468888888999999999999887753211 134679999999986656778899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChhhhhhccC--------------------------------CCccccCcCCCCCccc---------
Q 042088 84 DKMLCLSRQFFHFPEDYVRLHCY--------------------------------PLEDYMHEWATNPQSF--------- 122 (286)
Q Consensus 84 ~~~~~~~~~fF~Lp~e~~~~~~~--------------------------------p~~~~~~~WP~~~~~f--------- 122 (286)
+++++.+++||+||.|.|...+. |....+|.||..+++|
T Consensus 85 ~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~ 164 (348)
T PLN02912 85 KKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSFNVSKEKVSNWRDFLRLHCYPIEDFIEEWPSTPISFREVTAEYAT 164 (348)
T ss_pred HHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccccccccccccCCchheEEEeecCcccccccCcchhHHHHHHHHHHHH
Confidence 99999999999999976554110 0000147899877777
Q ss_pred ---------------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEEECCeE
Q 042088 123 ---------------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVLINGRW 187 (286)
Q Consensus 123 ---------------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~~~g~W 187 (286)
+||+++++|.+.+....+.||++|||||+.++..+|+++|||+|+||||+||+++||||+++|+|
T Consensus 165 ~~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~~~g~W 244 (348)
T PLN02912 165 SVRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFKDGKW 244 (348)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEEEECCcE
Confidence 89999999999888778899999999999888899999999999999999999999999999999
Q ss_pred EEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC-----CCCCccHHH
Q 042088 188 VAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM-----LILPTTGTL 262 (286)
Q Consensus 188 ~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~-----~~~~~t~~e 262 (286)
++|+|.||++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|+.|+|++++++++ .|+++|++|
T Consensus 245 i~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~e 324 (348)
T PLN02912 245 IAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAE 324 (348)
T ss_pred EECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHH
Confidence 999999999999999999999999999999999988888999999999999999999999998753 589999999
Q ss_pred HHHHHHhccCCCchhhh
Q 042088 263 HIASTTRNSGTGDLQLK 279 (286)
Q Consensus 263 ~~~~~~~~~~~~~~~~~ 279 (286)
|+..++.+...++..|.
T Consensus 325 y~~~~~~~~~~~~~~l~ 341 (348)
T PLN02912 325 YFEKFWDTAFATESCID 341 (348)
T ss_pred HHHHHHhcccCCcchhh
Confidence 99999998888876664
No 5
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-68 Score=502.98 Aligned_cols=274 Identities=31% Similarity=0.538 Sum_probs=240.1
Q ss_pred hhHHHHhc-cCCCCCCcccCCCCCCCCCC--CCCCCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 6 SLVFNVAS-SVSSIPSNYIRPASNRPNLD--GVYLDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 6 ~~v~~~~~-~~~~ip~~~~~p~~~~~~~~--~~~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
.+|+.+++ ++++||++|++|.++++... ......+||+|||+.+.++ ++.+++++|.+||++||||||+||||+
T Consensus 15 ~~~~~l~~~~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~ 94 (361)
T PLN02758 15 DDVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIE 94 (361)
T ss_pred ccHHHHHhcCCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCC
Confidence 46899998 89999999999998887532 1124568999999998654 235678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhhhc---------cCC----------------------Cc-cccCcCCCCCccc-----
Q 042088 80 EEVMDKMLCLSRQFFHFPEDYVRLH---------CYP----------------------LE-DYMHEWATNPQSF----- 122 (286)
Q Consensus 80 ~~~~~~~~~~~~~fF~Lp~e~~~~~---------~~p----------------------~~-~~~~~WP~~~~~f----- 122 (286)
.++++++++.+++||+||.|.|... |.+ .. ..+|.||+.+++|
T Consensus 95 ~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~~~~fr~~~~ 174 (361)
T PLN02758 95 LELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSETLE 174 (361)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccccCcccccccccccCeeEEEEeeccCccccccccCccccHHHHHHHH
Confidence 9999999999999999999655431 111 00 0157899877677
Q ss_pred -------------------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCC--CCCeEE
Q 042088 123 -------------------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDD--VPGLQV 181 (286)
Q Consensus 123 -------------------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~--~~GLqV 181 (286)
+||+++++|.+.+....+.||+||||+|+.++..+|+++|||+|+||||+||+ ++||||
T Consensus 175 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV 254 (361)
T PLN02758 175 VYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQI 254 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeee
Confidence 89999999999988888899999999999988899999999999999999984 899999
Q ss_pred EECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCc
Q 042088 182 LINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPT 258 (286)
Q Consensus 182 ~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~ 258 (286)
+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|++|+|++++++++ +|+++
T Consensus 255 ~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~ 334 (361)
T PLN02758 255 LKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRY 334 (361)
T ss_pred eeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCc
Confidence 999999999999999999999999999999999999999998888999999999999999999999999865 68999
Q ss_pred cHHHHHHHHHhccCCCchhhh
Q 042088 259 TGTLHIASTTRNSGTGDLQLK 279 (286)
Q Consensus 259 t~~e~~~~~~~~~~~~~~~~~ 279 (286)
|++||+..++.+...++..+.
T Consensus 335 ~~~ey~~~~~~~~~~~~~~~~ 355 (361)
T PLN02758 335 NHGEYSRHYVTSKLQGKKTLE 355 (361)
T ss_pred cHHHHHHHHHhcccCchhhhh
Confidence 999999999999888776663
No 6
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.6e-67 Score=491.03 Aligned_cols=266 Identities=48% Similarity=0.839 Sum_probs=232.5
Q ss_pred Hhc-cC--CCCCCcccCCCCCCCCCCCCCCCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHH
Q 042088 11 VAS-SV--SSIPSNYIRPASNRPNLDGVYLDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKML 87 (286)
Q Consensus 11 ~~~-~~--~~ip~~~~~p~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~ 87 (286)
+++ |+ .+||+.|++|.+.++.........+||+|||+.. ++++++++|.+||++||||||+||||+.+++++++
T Consensus 5 ~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~---~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~ 81 (337)
T PLN02639 5 LLSTGIRHTTLPESYVRPESERPRLSEVSTCENVPVIDLGSP---DRAQVVQQIGDACRRYGFFQVINHGVSAELVEKML 81 (337)
T ss_pred hhhhcCCcCcCCHHhcCCchhcccccccccCCCCCeEECCCc---cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHH
Confidence 566 54 9999999999988774321124568999999974 46789999999999999999999999999999999
Q ss_pred HHHHHHhcCChhhhhhccC--------------------------------CCccccCcCCCCCccc-------------
Q 042088 88 CLSRQFFHFPEDYVRLHCY--------------------------------PLEDYMHEWATNPQSF------------- 122 (286)
Q Consensus 88 ~~~~~fF~Lp~e~~~~~~~--------------------------------p~~~~~~~WP~~~~~f------------- 122 (286)
+.+++||+||.|.|..... |.....|.||+.+++|
T Consensus 82 ~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~ 161 (337)
T PLN02639 82 AVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKVHNWRDYLRLHCYPLDKYVPEWPSNPPSFKEIVSTYCREVRE 161 (337)
T ss_pred HHHHHHhcCCHHHHhhhhccCCCCccccccccccccCcccCchheEEeeecCCcccchhCcccchHHHHHHHHHHHHHHH
Confidence 9999999999976543100 0001146799877777
Q ss_pred -----------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecC-CCCCeEEEECCeEEEE
Q 042088 123 -----------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQD-DVPGLQVLINGRWVAV 190 (286)
Q Consensus 123 -----------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V 190 (286)
+||+++++|.+.+....+.+|++|||||+.++..+|+++|||+|+||||+|| .++||||+++|+|++|
T Consensus 162 l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V 241 (337)
T PLN02639 162 LGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAV 241 (337)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeecCCeEEec
Confidence 8999999999988887789999999999988888999999999999999998 4999999999999999
Q ss_pred eecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHH
Q 042088 191 NPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIAST 267 (286)
Q Consensus 191 ~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~ 267 (286)
+|.||++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|++|+|++++++++ +|+++|++||+..+
T Consensus 242 ~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~ 321 (337)
T PLN02639 242 NPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKF 321 (337)
T ss_pred cCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999988888999999999999999999999998765 68999999999999
Q ss_pred HhccCCCchhhh
Q 042088 268 TRNSGTGDLQLK 279 (286)
Q Consensus 268 ~~~~~~~~~~~~ 279 (286)
+.+.+.++..|.
T Consensus 322 ~~~~~~~~~~l~ 333 (337)
T PLN02639 322 WSRNLDQEHCLE 333 (337)
T ss_pred HhccCCCchhhH
Confidence 998888776653
No 7
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=2.8e-67 Score=494.73 Aligned_cols=275 Identities=32% Similarity=0.578 Sum_probs=238.2
Q ss_pred CchhHHHHhc-cCCCCCCcccCCCCCCCCCCCC------CCCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEE
Q 042088 4 PNSLVFNVAS-SVSSIPSNYIRPASNRPNLDGV------YLDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRT 73 (286)
Q Consensus 4 ~~~~v~~~~~-~~~~ip~~~~~p~~~~~~~~~~------~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l 73 (286)
....|++|++ ++.+||+.|++|+++++..... ....+||+|||+.+.++ ++.+++++|.+||+++|||||
T Consensus 4 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l 83 (360)
T PLN03178 4 AVPRVEALASSGVSSIPKEYIRPPEERPSIGDVFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHL 83 (360)
T ss_pred hhhhHHHHHhcCCCCCCHHHcCCchhcccccccccccccccCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEE
Confidence 3455899998 8999999999999888754211 13557999999998764 367899999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHHHhcCChhhhhh-----------ccC----------------------CCcc-ccCcCCCCC
Q 042088 74 ENNGIPEEVMDKMLCLSRQFFHFPEDYVRL-----------HCY----------------------PLED-YMHEWATNP 119 (286)
Q Consensus 74 ~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~-----------~~~----------------------p~~~-~~~~WP~~~ 119 (286)
+||||+.++++++++.+++||+||.|.|.. +|. |... .+|.||+.+
T Consensus 84 ~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~ 163 (360)
T PLN03178 84 VGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQGYGSKLAANASGQLEWEDYFFHLTLPEDKRDPSLWPKTP 163 (360)
T ss_pred EcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCccccccccccccccccchhHhhccccCCccccccccCCCCc
Confidence 999999999999999999999999965432 110 1001 167899877
Q ss_pred ccc------------------------cCCCCCChhHHhhcC---CCccceeeccCCCCCCCcccCcccccCCCcEEEEe
Q 042088 120 QSF------------------------SLGLERDYPIKALGN---HGQHMAINYCPLCPQPELTYGLPCQTDPNVITILL 172 (286)
Q Consensus 120 ~~f------------------------~Lgl~~~~~~~~~~~---~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~ 172 (286)
++| +||+++++|.+.+.. ..+.+|++|||+|+.++..+|+++|||+|+||||+
T Consensus 164 p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~ 243 (360)
T PLN03178 164 PDYVPATSEYSRSLRSLATKLLAILSLGLGLPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFIL 243 (360)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEe
Confidence 777 899999999998863 35689999999999888899999999999999999
Q ss_pred cCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCe-EecCCcccc
Q 042088 173 QDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAM-IGPAPHLIN 251 (286)
Q Consensus 173 qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~-i~pl~~~~~ 251 (286)
||+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|+. ++|++++++
T Consensus 244 qd~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~ 323 (360)
T PLN03178 244 HNMVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVS 323 (360)
T ss_pred eCCCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcC
Confidence 9999999999999999999999999999999999999999999999999887788999999999999975 599999988
Q ss_pred cC---CCCCccHHHHHHHHHhccCCCchhh
Q 042088 252 DM---LILPTTGTLHIASTTRNSGTGDLQL 278 (286)
Q Consensus 252 ~~---~~~~~t~~e~~~~~~~~~~~~~~~~ 278 (286)
++ +|+++|++||+..|+.+...++..+
T Consensus 324 ~~~p~~y~p~~~~eyl~~~~~~~~~~~~~~ 353 (360)
T PLN03178 324 KEEPPKFPPRTFGQHVSHKLFKKPQDERNI 353 (360)
T ss_pred CCCcccCCCccHHHHHHHHHhcccCcchhH
Confidence 65 5899999999999999888876554
No 8
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=5.2e-67 Score=493.05 Aligned_cols=277 Identities=38% Similarity=0.607 Sum_probs=241.6
Q ss_pred CCchhHHHHhc-cCCCCCCcccCCCCCCCCCC---CCCCCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEEEe
Q 042088 3 FPNSLVFNVAS-SVSSIPSNYIRPASNRPNLD---GVYLDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRTEN 75 (286)
Q Consensus 3 ~~~~~v~~~~~-~~~~ip~~~~~p~~~~~~~~---~~~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~n 75 (286)
+|.+.|+.+++ +..+||+.|++|+++++... ......+||+|||+.+.++ .+.+++++|.+||++||||||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~n 89 (362)
T PLN02393 10 EPIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVN 89 (362)
T ss_pred CccchHHHHHhcCCCcCCHHHcCCchhccccccccccCcCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEe
Confidence 57788999988 89999999999998887431 1124568999999998764 36789999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCChhhhhh---------ccC-C---------------------Ccc-ccCcCCCCCccc-
Q 042088 76 NGIPEEVMDKMLCLSRQFFHFPEDYVRL---------HCY-P---------------------LED-YMHEWATNPQSF- 122 (286)
Q Consensus 76 hGi~~~~~~~~~~~~~~fF~Lp~e~~~~---------~~~-p---------------------~~~-~~~~WP~~~~~f- 122 (286)
|||+.++++++++.+++||+||.|.|.. +|. + ... .+|.||+.+++|
T Consensus 90 HGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~n~wP~~~~~fr 169 (362)
T PLN02393 90 HGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSSLKDPNKWPSLPPSCR 169 (362)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccccccccccccccccCchhheeeeecCccccchhhCcccchHHH
Confidence 9999999999999999999999965542 121 0 000 157899877777
Q ss_pred -----------------------cCCCCCChhHHhhcCC---CccceeeccCCCCCCCcccCcccccCCCcEEEEecC-C
Q 042088 123 -----------------------SLGLERDYPIKALGNH---GQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQD-D 175 (286)
Q Consensus 123 -----------------------~Lgl~~~~~~~~~~~~---~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~ 175 (286)
+||+++++|.+.+... .+.+|++|||+|+.++..+|+++|||+|+||||+|+ +
T Consensus 170 ~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~ 249 (362)
T PLN02393 170 ELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDN 249 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCC
Confidence 8999999999988653 368999999999988888999999999999999985 7
Q ss_pred CCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC--
Q 042088 176 VPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM-- 253 (286)
Q Consensus 176 ~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~-- 253 (286)
++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|++|+|++++++++
T Consensus 250 v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p 329 (362)
T PLN02393 250 VAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRP 329 (362)
T ss_pred CCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCC
Confidence 999999999999999999999999999999999999999999999998888999999999999999999999998865
Q ss_pred -CCCCccHHHHHHHHHhccCCCchhhh
Q 042088 254 -LILPTTGTLHIASTTRNSGTGDLQLK 279 (286)
Q Consensus 254 -~~~~~t~~e~~~~~~~~~~~~~~~~~ 279 (286)
+|+++|++||+..+..+..+++..++
T Consensus 330 ~~y~~~~~~ey~~~~~~~~~~~~~~~~ 356 (362)
T PLN02393 330 ALYPPMTFDEYRLFIRTKGPRGKSQVE 356 (362)
T ss_pred CCCCCccHHHHHHHHHhcccCcchHHh
Confidence 68999999999988888888877664
No 9
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=9.1e-67 Score=490.15 Aligned_cols=259 Identities=31% Similarity=0.554 Sum_probs=222.2
Q ss_pred cCCCCCCcccCCCCCC--CCCCC--CCCCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHH
Q 042088 14 SVSSIPSNYIRPASNR--PNLDG--VYLDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCL 89 (286)
Q Consensus 14 ~~~~ip~~~~~p~~~~--~~~~~--~~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~ 89 (286)
.+.++|++|++|.+++ +.... .....+||||||+. ..++++|.+||++||||||+||||+.++++++++.
T Consensus 26 ~~~~vp~~~v~p~~~~~~~~~~~~~~~~~~~iPvIDl~~------~~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~ 99 (358)
T PLN02254 26 SLQTLPDSHVWTPKDDLLFSSAPSPSTTDESIPVIDLSD------PNALTLIGHACETWGVFQVTNHGIPLSLLDDIESQ 99 (358)
T ss_pred hhccCChhhcCChhhccCccccccccCcCCCCCeEeCCC------HHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHH
Confidence 4568999999999887 32111 12345799999985 35789999999999999999999999999999999
Q ss_pred HHHHhcCChhhhhh---------ccC----------------------CCccccCcCCCCCccc----------------
Q 042088 90 SRQFFHFPEDYVRL---------HCY----------------------PLEDYMHEWATNPQSF---------------- 122 (286)
Q Consensus 90 ~~~fF~Lp~e~~~~---------~~~----------------------p~~~~~~~WP~~~~~f---------------- 122 (286)
+++||+||.|.|.. +|. |.....|.||+.+++|
T Consensus 100 ~~~FF~LP~EeK~k~~~~~~~~~Gy~~~~~~~~~~~~~w~e~~~~~~~p~~~~~~~wP~~~~~fr~~~~~Y~~~~~~L~~ 179 (358)
T PLN02254 100 TRRLFSLPAQRKLKAARSPDGVSGYGVARISSFFNKKMWSEGFTIMGSPLEHARQLWPQDHTKFCDVMEEYQKEMKKLAE 179 (358)
T ss_pred HHHHHcCCHHHHHhhccCCCCcccccccccccccCCCCceeeEEeecCccccchhhCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999976542 111 1111258899887777
Q ss_pred --------cCCCCCChhHHhh-----cCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEEECC-eEE
Q 042088 123 --------SLGLERDYPIKAL-----GNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVLING-RWV 188 (286)
Q Consensus 123 --------~Lgl~~~~~~~~~-----~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~~~g-~W~ 188 (286)
+||+++++|.+.+ ..+.+.||+||||||+.++..+|+++|||+|+||||+||+++||||+++| +|+
T Consensus 180 ~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~~~Wi 259 (358)
T PLN02254 180 RLMWLMLGSLGITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQSNTSGLQVFREGVGWV 259 (358)
T ss_pred HHHHHHHHHcCCCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecCCCCCceEECCCCEEE
Confidence 8999988988765 34567899999999999888999999999999999999999999999655 899
Q ss_pred EEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHH
Q 042088 189 AVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIA 265 (286)
Q Consensus 189 ~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~ 265 (286)
+|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|++|+|++++++++ +|+++|++||+.
T Consensus 260 ~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~ 339 (358)
T PLN02254 260 TVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLA 339 (358)
T ss_pred EcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHH
Confidence 99999999999999999999999999999999998888999999999999999999999999865 689999999999
Q ss_pred HHHhccCCCchhh
Q 042088 266 STTRNSGTGDLQL 278 (286)
Q Consensus 266 ~~~~~~~~~~~~~ 278 (286)
.++.+...+.+.+
T Consensus 340 ~~~~~~~~~~~~~ 352 (358)
T PLN02254 340 TKAKHFNKALSLI 352 (358)
T ss_pred HHHHhhhhhhhhh
Confidence 9988777755444
No 10
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.3e-65 Score=482.35 Aligned_cols=259 Identities=33% Similarity=0.593 Sum_probs=223.6
Q ss_pred cCCCCCCcccCCCCCCCCCCCCCCCCCCceEeCCCCCCC--ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHH
Q 042088 14 SVSSIPSNYIRPASNRPNLDGVYLDDCIPQIDLRYLNGS--NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSR 91 (286)
Q Consensus 14 ~~~~ip~~~~~p~~~~~~~~~~~~~~~iPvIDls~l~~~--~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~ 91 (286)
++.+||..|++|.++++.....+...+||+|||+.+..+ ++.+++++|.+||++||||||+||||+.++++++++.++
T Consensus 11 ~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~ 90 (358)
T PLN02515 11 GESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLAR 90 (358)
T ss_pred CCCcCCHHhcCCchhccCccccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 578999999999988875422233457999999998643 467889999999999999999999999999999999999
Q ss_pred HHhcCChhhhhh---------ccC----------------------CCc-cccCcCCCCCccc-----------------
Q 042088 92 QFFHFPEDYVRL---------HCY----------------------PLE-DYMHEWATNPQSF----------------- 122 (286)
Q Consensus 92 ~fF~Lp~e~~~~---------~~~----------------------p~~-~~~~~WP~~~~~f----------------- 122 (286)
+||+||.|.|.. +|. |.. ...|.||+.+++|
T Consensus 91 ~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~~~~~~~~n~WP~~~~~fr~~~~~y~~~~~~L~~~ 170 (358)
T PLN02515 91 DFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRTRDYSRWPDKPEGWRAVTEEYSEKLMGLACK 170 (358)
T ss_pred HHhcCCHHHHhhhCcCCCCccCcccccccccccccCceeeeccccCcccccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999965432 110 100 0147899877777
Q ss_pred -------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEEEC-C-eEEEEeec
Q 042088 123 -------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVLIN-G-RWVAVNPI 193 (286)
Q Consensus 123 -------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~~~-g-~W~~V~p~ 193 (286)
+||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+.+ | +|++|+|.
T Consensus 171 ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~~Wi~Vpp~ 250 (358)
T PLN02515 171 LLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPV 250 (358)
T ss_pred HHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECCCCeEEECCCC
Confidence 89999999999887777889999999999888899999999999999999999999999854 3 79999999
Q ss_pred CCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHHHhc
Q 042088 194 SRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIASTTRN 270 (286)
Q Consensus 194 pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~~~~ 270 (286)
||++|||+||+||+||||+||||+|||+.++..+|||++||++|+.|++|+|++ +++++ .|+++|++||+.+++.+
T Consensus 251 pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~~~~~ 329 (358)
T PLN02515 251 EGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITFAEMYRRKMSR 329 (358)
T ss_pred CCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHHHHHHHHhc
Confidence 999999999999999999999999999988888999999999999999999997 44443 58999999999999877
Q ss_pred cCC
Q 042088 271 SGT 273 (286)
Q Consensus 271 ~~~ 273 (286)
...
T Consensus 330 ~~~ 332 (358)
T PLN02515 330 DLE 332 (358)
T ss_pred ccc
Confidence 765
No 11
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.8e-65 Score=478.35 Aligned_cols=261 Identities=34% Similarity=0.607 Sum_probs=227.3
Q ss_pred hHHHHhc-c--CCCCCCcccCCCCCCCCCCCC-CCCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHH
Q 042088 7 LVFNVAS-S--VSSIPSNYIRPASNRPNLDGV-YLDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEV 82 (286)
Q Consensus 7 ~v~~~~~-~--~~~ip~~~~~p~~~~~~~~~~-~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~ 82 (286)
.|+.+++ + ..+||+.|++|.++++.+... ....+||+|||+.. ++.+++++|.+||+++|||||+||||+.++
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~iPvIDls~~---~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l 81 (335)
T PLN02704 5 RVQAIASSSLLKETIPEEFIRSEKEQPAITTFHGVDPQVPTIDLSDP---DEEKLTRLIAEASKEWGMFQIVNHGIPSEV 81 (335)
T ss_pred hHHHHHhCCCCcCCCCHHHcCCcccccccccccccCCCCCeEECCCc---cHHHHHHHHHHHHHHcCEEEEEcCCCCHHH
Confidence 5788877 4 789999999999998865221 24568999999975 346789999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCChhhhhhc-----------cCCC------------cc-----------ccCcCCCCCccc------
Q 042088 83 MDKMLCLSRQFFHFPEDYVRLH-----------CYPL------------ED-----------YMHEWATNPQSF------ 122 (286)
Q Consensus 83 ~~~~~~~~~~fF~Lp~e~~~~~-----------~~p~------------~~-----------~~~~WP~~~~~f------ 122 (286)
++++++.+++||+||.|.|... |... +. ..|.||+.+++|
T Consensus 82 ~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~d~~~~~~~p~~~~~~n~wP~~~p~fr~~~~~ 161 (335)
T PLN02704 82 ISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTKLQKEPEGKKAWVDHLFHRIWPPSAINYQFWPKNPPSYREVNEE 161 (335)
T ss_pred HHHHHHHHHHHHcCCHHHHHHhhccCCCcccccccccccccccCcccceeeeEeeecCCcccchhhCccccchhHHHHHH
Confidence 9999999999999999765421 1100 00 025799877777
Q ss_pred ------------------cCCCCCChhHHhhcCC--CccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEE
Q 042088 123 ------------------SLGLERDYPIKALGNH--GQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVL 182 (286)
Q Consensus 123 ------------------~Lgl~~~~~~~~~~~~--~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~ 182 (286)
+||+++++|.+.+... .+.+|++|||||+.++..+|+++|||+|+||||+||+++||||+
T Consensus 162 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~ 241 (335)
T PLN02704 162 YAKYLRGVADKLFKTLSLGLGLEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVF 241 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCCceeEe
Confidence 8999999999887642 35799999999998888999999999999999999999999999
Q ss_pred ECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCcc
Q 042088 183 INGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTT 259 (286)
Q Consensus 183 ~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t 259 (286)
++|+|++|+|.||++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|+.|+|++++++++ +|+++|
T Consensus 242 ~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~ 321 (335)
T PLN02704 242 RDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKK 321 (335)
T ss_pred ECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999998876 689999
Q ss_pred HHHHHHHHHhc
Q 042088 260 GTLHIASTTRN 270 (286)
Q Consensus 260 ~~e~~~~~~~~ 270 (286)
++||+..++.+
T Consensus 322 ~~e~~~~~~~~ 332 (335)
T PLN02704 322 FKDYVYCKLNK 332 (335)
T ss_pred HHHHHHHHHhc
Confidence 99999999863
No 12
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=2.5e-65 Score=481.45 Aligned_cols=263 Identities=31% Similarity=0.512 Sum_probs=228.8
Q ss_pred CCCCCCcccCCCCCCCCCCCCCCCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHH
Q 042088 15 VSSIPSNYIRPASNRPNLDGVYLDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSR 91 (286)
Q Consensus 15 ~~~ip~~~~~p~~~~~~~~~~~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~ 91 (286)
..+||..|++|.++++..+ ....+||+|||+.+.++ ++.+++++|.+||++||||||+||||+.++++++++.++
T Consensus 17 ~~~vp~~~~~~~~~~p~~~--~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~ 94 (361)
T PLN02276 17 QSNIPAQFIWPDEEKPSAA--VPELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMD 94 (361)
T ss_pred CCCCCHHhcCCccccCCCC--CcCCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3579999999998887531 23468999999998653 456789999999999999999999999999999999999
Q ss_pred HHhcCChhhhhh---------ccCC----------------------Cc-------cc-cCcCCCCCccc----------
Q 042088 92 QFFHFPEDYVRL---------HCYP----------------------LE-------DY-MHEWATNPQSF---------- 122 (286)
Q Consensus 92 ~fF~Lp~e~~~~---------~~~p----------------------~~-------~~-~~~WP~~~~~f---------- 122 (286)
+||+||.|.|.. +|.+ .. .. +|.||.+.++|
T Consensus 95 ~FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~ 174 (361)
T PLN02276 95 AFFKLPLSEKQRAQRKPGESCGYASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEA 174 (361)
T ss_pred HHHcCCHHHHHhhccCCCCccccCccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHH
Confidence 999999966542 1111 00 00 24566544444
Q ss_pred --------------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEEECCeEE
Q 042088 123 --------------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVLINGRWV 188 (286)
Q Consensus 123 --------------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~~~g~W~ 188 (286)
+||+++++|.+.+..+.+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+++|+|+
T Consensus 175 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi 254 (361)
T PLN02276 175 MKTLSLKIMELLGISLGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVFVDNKWR 254 (361)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEEECCEEE
Confidence 899999999999888888999999999998888999999999999999999999999999999999
Q ss_pred EEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHH
Q 042088 189 AVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIA 265 (286)
Q Consensus 189 ~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~ 265 (286)
+|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|+.|+|++++++++ +|+++|++||++
T Consensus 255 ~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~ 334 (361)
T PLN02276 255 SVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLE 334 (361)
T ss_pred EcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999998888999999999999999999999999865 689999999999
Q ss_pred HHHhccCCCchhhh
Q 042088 266 STTRNSGTGDLQLK 279 (286)
Q Consensus 266 ~~~~~~~~~~~~~~ 279 (286)
.+..+...+...|+
T Consensus 335 ~~~~~~~~~~~~l~ 348 (361)
T PLN02276 335 FTQKHYRADMNTLQ 348 (361)
T ss_pred HHHHhcccchhHHH
Confidence 99888887777665
No 13
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4e-65 Score=477.74 Aligned_cols=258 Identities=33% Similarity=0.575 Sum_probs=225.9
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhc
Q 042088 16 SSIPSNYIRPASNRPNLDGVYLDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFH 95 (286)
Q Consensus 16 ~~ip~~~~~p~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 95 (286)
.++|..|++|.++++.........+||+|||+.+...++.+++++|.+||+++|||||+||||+.++++++++.+++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~ 81 (345)
T PLN02750 2 GEIDPAFIQAPEHRPKFHLTNSDEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFD 81 (345)
T ss_pred CCCCHHHcCCchhccCccccccCCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHc
Confidence 57999999999888753211124689999999875446778899999999999999999999999999999999999999
Q ss_pred CChhhhhh---------ccC-------------------------CCc-----c----ccCcCCCCCccc----------
Q 042088 96 FPEDYVRL---------HCY-------------------------PLE-----D----YMHEWATNPQSF---------- 122 (286)
Q Consensus 96 Lp~e~~~~---------~~~-------------------------p~~-----~----~~~~WP~~~~~f---------- 122 (286)
||.|.|.. +|. |.. . .+|.||+.+++|
T Consensus 82 LP~eeK~~~~~~~~~~~GY~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~ 161 (345)
T PLN02750 82 QTTEEKRKVKRDEVNPMGYHDSEHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQ 161 (345)
T ss_pred CCHHHHHhhccCCCCccCcCcccccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHHHH
Confidence 99965532 110 000 0 148899877777
Q ss_pred --------------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEE--ECCe
Q 042088 123 --------------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVL--INGR 186 (286)
Q Consensus 123 --------------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~--~~g~ 186 (286)
+||+++++|.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+||+++||||+ .+|+
T Consensus 162 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g~ 241 (345)
T PLN02750 162 VEKLAFKLLELISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRSDGE 241 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCceEEeecCCCe
Confidence 899999999999988888999999999998777899999999999999999999999997 4899
Q ss_pred EEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHH
Q 042088 187 WVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLH 263 (286)
Q Consensus 187 W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~ 263 (286)
|++|+|.||++|||+||+||+||||+||||+|||+.++..+|||++||++|+.|++|+|++++++++ .|+++|++||
T Consensus 242 Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~ 321 (345)
T PLN02750 242 WIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKF 321 (345)
T ss_pred EEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHH
Confidence 9999999999999999999999999999999999998888999999999999999999999998876 5899999999
Q ss_pred HHHHHhccCC
Q 042088 264 IASTTRNSGT 273 (286)
Q Consensus 264 ~~~~~~~~~~ 273 (286)
+.+|+.+...
T Consensus 322 ~~~~~~~~~~ 331 (345)
T PLN02750 322 FASRNRSDYK 331 (345)
T ss_pred HHHHHhcccc
Confidence 9999888764
No 14
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.4e-63 Score=467.44 Aligned_cols=269 Identities=29% Similarity=0.488 Sum_probs=221.5
Q ss_pred HHHHhccCCCCCCcccCCCCCCCCC-C--CCCCCCCCceEeCCCCCCC--ChhHHHHHHHHHHhhcCeEEEEeCCCCHHH
Q 042088 8 VFNVASSVSSIPSNYIRPASNRPNL-D--GVYLDDCIPQIDLRYLNGS--NRSDVVKQTGQACQDYGFFRTENNGIPEEV 82 (286)
Q Consensus 8 v~~~~~~~~~ip~~~~~p~~~~~~~-~--~~~~~~~iPvIDls~l~~~--~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~ 82 (286)
|+++++.-..+|+.|++|+...+.. . ......+||+|||+.+.++ .+.+++++|.+||+++|||||+||||+.++
T Consensus 9 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l 88 (348)
T PLN00417 9 VQEVVAAGEGLPERYLHTPTGDGEGQPLNGAVPEMDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGITEAF 88 (348)
T ss_pred HHHHHhCCCCCCccccCCcccccccccccccccCCCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHH
Confidence 8888883369999999998775311 0 1123458999999988654 334567999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCChhhhhh---------ccCC----------------------Ccc-ccCcCCCCCccc--------
Q 042088 83 MDKMLCLSRQFFHFPEDYVRL---------HCYP----------------------LED-YMHEWATNPQSF-------- 122 (286)
Q Consensus 83 ~~~~~~~~~~fF~Lp~e~~~~---------~~~p----------------------~~~-~~~~WP~~~~~f-------- 122 (286)
++++++.+++||+||.|.|.. +|.+ ... ..|.||+.+++|
T Consensus 89 ~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~ 168 (348)
T PLN00417 89 LDKIYKLTKQFFALPTEEKQKCAREIGSIQGYGNDMILSDDQVLDWIDRLYLTTYPEDQRQLKFWPQVPVGFRETLHEYT 168 (348)
T ss_pred HHHHHHHHHHHHcCCHHHHHHhhcCCCCccccccccccccCCCcCccceeecccCCcccccccccccccHHHHHHHHHHH
Confidence 999999999999999965432 1111 000 137899877777
Q ss_pred ----------------cCCCCCChhHHhhcCC-CccceeeccCCCCCCCcccCcccccCCCcEEEEecC-CCCCeEEEEC
Q 042088 123 ----------------SLGLERDYPIKALGNH-GQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQD-DVPGLQVLIN 184 (286)
Q Consensus 123 ----------------~Lgl~~~~~~~~~~~~-~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~ 184 (286)
+||+++++|.+.+... .+.||++|||||+.++..+|+++|||+|+||||+|| +++||||+++
T Consensus 169 ~~~~~l~~~ll~~la~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~ 248 (348)
T PLN00417 169 MKQRLVIEKFFKAMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFLKD 248 (348)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEeEC
Confidence 8999999999888653 457999999999988888999999999999999997 6999999999
Q ss_pred CeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHH
Q 042088 185 GRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGT 261 (286)
Q Consensus 185 g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~ 261 (286)
|+|++|+|.||++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|++|+|++++++++ +|+++|.+
T Consensus 249 g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~ 328 (348)
T PLN00417 249 GKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKY 328 (348)
T ss_pred CeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999988888999999999999999999999998765 68888844
Q ss_pred HHHHHHHhccCCCchhh
Q 042088 262 LHIASTTRNSGTGDLQL 278 (286)
Q Consensus 262 e~~~~~~~~~~~~~~~~ 278 (286)
+ ..+......+...|
T Consensus 329 ~--~~~~~~~~~~~~~~ 343 (348)
T PLN00417 329 V--ELFFKYYQQGRRPI 343 (348)
T ss_pred H--HHHHHHHhcCcchh
Confidence 4 44443333344334
No 15
>PLN02997 flavonol synthase
Probab=100.00 E-value=4.9e-63 Score=459.58 Aligned_cols=232 Identities=29% Similarity=0.510 Sum_probs=206.3
Q ss_pred CCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhh--------ccCC-
Q 042088 37 LDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRL--------HCYP- 107 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~--------~~~p- 107 (286)
...+||+|||+.+ ++++++++|.+||++||||||+||||+.++++++++.+++||+||.|.|.. +|.+
T Consensus 29 ~~~~IPvIDls~~---~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~~~ 105 (325)
T PLN02997 29 SAVDVPVVDLSVS---DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYKRN 105 (325)
T ss_pred CCCCCCeEECCCC---CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccCcc
Confidence 3568999999975 357899999999999999999999999999999999999999999976542 1211
Q ss_pred ------------------Ccc-ccCcCCCCCccc------------------------cCCCCCChhHHhhcCC--Cccc
Q 042088 108 ------------------LED-YMHEWATNPQSF------------------------SLGLERDYPIKALGNH--GQHM 142 (286)
Q Consensus 108 ------------------~~~-~~~~WP~~~~~f------------------------~Lgl~~~~~~~~~~~~--~~~l 142 (286)
... ..|.||+.+++| +||+++++|.+.+... .+.|
T Consensus 106 ~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~~~~l 185 (325)
T PLN02997 106 YLGGINNWDEHLFHRLSPPSIINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQSIGGETAEYVL 185 (325)
T ss_pred cccCCCCccceeEeeecCccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCccccee
Confidence 000 147899877777 8999999999988643 3579
Q ss_pred eeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEee
Q 042088 143 AINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIV 222 (286)
Q Consensus 143 rl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~ 222 (286)
|+||||||+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.
T Consensus 186 Rl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~ 265 (325)
T PLN02997 186 RVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKT 265 (325)
T ss_pred eeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccceeeC
Confidence 99999999988888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHHHhcc
Q 042088 223 NCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIASTTRNS 271 (286)
Q Consensus 223 ~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~~~~~ 271 (286)
++..+|||++||++|+.|+.|+|++++++++ .|+++|++||+.+|+.+.
T Consensus 266 ~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~~ 317 (325)
T PLN02997 266 DKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRGW 317 (325)
T ss_pred CCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhhc
Confidence 8888899999999999999999999998866 589999999999998743
No 16
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=9.9e-63 Score=457.02 Aligned_cols=239 Identities=30% Similarity=0.534 Sum_probs=210.3
Q ss_pred CCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc------cCCC--
Q 042088 37 LDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH------CYPL-- 108 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~------~~p~-- 108 (286)
.+.+||+|||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|.+... +.+.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~gy~~~~~ 82 (321)
T PLN02299 3 KMESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVASKGLEGVQT 82 (321)
T ss_pred CCCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccCCCCcccccc
Confidence 45689999999986546677899999999999999999999999999999999999999999665431 1110
Q ss_pred -----c------------cccCcCCCCCccc------------------------cCCCCCChhHHhhcC---CCcccee
Q 042088 109 -----E------------DYMHEWATNPQSF------------------------SLGLERDYPIKALGN---HGQHMAI 144 (286)
Q Consensus 109 -----~------------~~~~~WP~~~~~f------------------------~Lgl~~~~~~~~~~~---~~~~lrl 144 (286)
+ ...+.||+.+++| +||+++++|.+.+.. ..+.+|+
T Consensus 83 ~~~~~d~ke~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl 162 (321)
T PLN02299 83 EVEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKV 162 (321)
T ss_pred cCCCcCHHHHcccccCCccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeee
Confidence 0 0146799877777 899999999888753 3457999
Q ss_pred eccCCCCCCCcccCcccccCCCcEEEEecC-CCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeC
Q 042088 145 NYCPLCPQPELTYGLPCQTDPNVITILLQD-DVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVN 223 (286)
Q Consensus 145 ~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~ 223 (286)
+|||||+.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.+
T Consensus 163 ~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~ 242 (321)
T PLN02299 163 SNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQ 242 (321)
T ss_pred EecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecC
Confidence 999999988888999999999999999997 5999999999999999999999999999999999999999999999998
Q ss_pred CCCceeeeEEeecCCCCCeEecCCcccccC-----CCCCccHHHHHHHHHhccCCCc
Q 042088 224 CNKERISIPTIYCPSPDAMIGPAPHLINDM-----LILPTTGTLHIASTTRNSGTGD 275 (286)
Q Consensus 224 ~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~-----~~~~~t~~e~~~~~~~~~~~~~ 275 (286)
+..+|||++||++|+.|++|+|++++++++ .|++++++||+..++.+.+.+.
T Consensus 243 ~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~ 299 (321)
T PLN02299 243 TDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAK 299 (321)
T ss_pred CCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCc
Confidence 888999999999999999999999998743 5899999999999998887765
No 17
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=3.2e-62 Score=454.04 Aligned_cols=236 Identities=28% Similarity=0.440 Sum_probs=207.2
Q ss_pred CCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhh----------
Q 042088 37 LDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRL---------- 103 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~---------- 103 (286)
+..+||+|||+.+.++ ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|.|..
T Consensus 2 ~~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~ 81 (320)
T PTZ00273 2 TRASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHR 81 (320)
T ss_pred CCCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCC
Confidence 3568999999998754 356789999999999999999999999999999999999999999954332
Q ss_pred ccC-------------------------CCcc----------ccCcCCCCCccc------------------------cC
Q 042088 104 HCY-------------------------PLED----------YMHEWATNPQSF------------------------SL 124 (286)
Q Consensus 104 ~~~-------------------------p~~~----------~~~~WP~~~~~f------------------------~L 124 (286)
+|. |... .+|.||+.+++| +|
T Consensus 82 GY~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~L 161 (320)
T PTZ00273 82 GYGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELMETHYRDMQALALVLLRALALAI 161 (320)
T ss_pred CCCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 1000 168899877777 89
Q ss_pred CCCCChhHHhhcCCCccceeeccCCCCCC-CcccCcccccCCCcEEEEecCCCCCeEEE-ECCeEEEEeecCCeEEEEec
Q 042088 125 GLERDYPIKALGNHGQHMAINYCPLCPQP-ELTYGLPCQTDPNVITILLQDDVPGLQVL-INGRWVAVNPISRTFTVNIG 202 (286)
Q Consensus 125 gl~~~~~~~~~~~~~~~lrl~~Ypp~~~~-~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~~vVnvG 202 (286)
|+++++|.+.+..+.+.+|++||||++.+ +..+|+++|||+|+||||+||.++||||+ ++|+|++|+|.||++|||+|
T Consensus 162 gl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~lvVNvG 241 (320)
T PTZ00273 162 GLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSFVVNIG 241 (320)
T ss_pred CcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeEEEEHH
Confidence 99999999988888889999999999874 46899999999999999999999999999 69999999999999999999
Q ss_pred hhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHHHhccCC
Q 042088 203 GQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIASTTRNSGT 273 (286)
Q Consensus 203 d~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~~~~~~~ 273 (286)
|+||+||||+||||+|||+.+ ..+|||++||++|+.|++|+|++++++++ .|+++|++||+.+|+.+.+.
T Consensus 242 D~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~~~ 314 (320)
T PTZ00273 242 DMMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAETYA 314 (320)
T ss_pred HHHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHHHHHH
Confidence 999999999999999999854 57899999999999999999999998765 58999999999999887764
No 18
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=1.9e-61 Score=447.76 Aligned_cols=241 Identities=42% Similarity=0.687 Sum_probs=212.4
Q ss_pred CCCCCceEeCCCCCCC--ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc---------c
Q 042088 37 LDDCIPQIDLRYLNGS--NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH---------C 105 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~--~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~---------~ 105 (286)
...+||+|||+.+... .+..++++|.+||++||||||+|||||.++++++++.+++||+||.|.+... |
T Consensus 14 ~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~gY 93 (322)
T KOG0143|consen 14 SELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRGY 93 (322)
T ss_pred cCCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCcccc
Confidence 4568999999987654 2678899999999999999999999999999999999999999999554321 1
Q ss_pred ----------------------CCCcc-ccCcCCCCCccc------------------------cCCCCCChhHHhhcC-
Q 042088 106 ----------------------YPLED-YMHEWATNPQSF------------------------SLGLERDYPIKALGN- 137 (286)
Q Consensus 106 ----------------------~p~~~-~~~~WP~~~~~f------------------------~Lgl~~~~~~~~~~~- 137 (286)
.|... ..+.||+.++.| +||++.+++.+.+..
T Consensus 94 ~~~~~~~~~~~~~w~d~~~~~~~p~~~~~~~~wp~~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~~~~~~~ 173 (322)
T KOG0143|consen 94 GTSFILSPLKELDWRDYLTLLSAPESSFDPNLWPEGPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLEKLFGET 173 (322)
T ss_pred cccccccccccccchhheeeeccCccccCcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhCCc
Confidence 11111 267899887666 899887667777766
Q ss_pred CCccceeeccCCCCCCCcccCcccccCCCcEEEEecC-CCCCeEEE-ECCeEEEEeecCCeEEEEechhHHHhhCCcccc
Q 042088 138 HGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQD-DVPGLQVL-INGRWVAVNPISRTFTVNIGGQIQVLSNDRYKS 215 (286)
Q Consensus 138 ~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks 215 (286)
....||+||||||++++..+|+++|||.++||+|+|| +++||||. ++|+|++|+|.||++|||+||+||+||||+|||
T Consensus 174 ~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykS 253 (322)
T KOG0143|consen 174 GGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKS 253 (322)
T ss_pred cceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccc
Confidence 4569999999999999999999999999999999998 89999999 699999999999999999999999999999999
Q ss_pred ccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC--CCCCccHHHHHHHHHhccCCCchh
Q 042088 216 VLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM--LILPTTGTLHIASTTRNSGTGDLQ 277 (286)
Q Consensus 216 ~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~--~~~~~t~~e~~~~~~~~~~~~~~~ 277 (286)
++|||++++.++|||+|+|+.|+.|.+|.|++++++++ +|+++|+.+|+..+..+..++...
T Consensus 254 v~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~~~~Y~~~~~~~y~~~~~~~~~~~~~~ 317 (322)
T KOG0143|consen 254 VLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEEPPKYKPFTFGDYLEFYFSKKLQGKTL 317 (322)
T ss_pred eEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCCCCccCcEEHHHHHHHHHhccccCcch
Confidence 99999999888899999999999999999999998765 599999999999999998888443
No 19
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=5.6e-61 Score=441.71 Aligned_cols=235 Identities=36% Similarity=0.583 Sum_probs=201.4
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc------c--------
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH------C-------- 105 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~------~-------- 105 (286)
+||+|||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.+.+... +
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~~~~~~~~~~~~~~~~~ 81 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFYESEIAKALDNEGKTSD 81 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhhcccccCcccccCCCCC
Confidence 69999999886546678899999999999999999999999999999999999999999654210 0
Q ss_pred -----------CCCccccCcCCCCCccc------------------------cCCCCCChhHHhhcC---CCccceeecc
Q 042088 106 -----------YPLEDYMHEWATNPQSF------------------------SLGLERDYPIKALGN---HGQHMAINYC 147 (286)
Q Consensus 106 -----------~p~~~~~~~WP~~~~~f------------------------~Lgl~~~~~~~~~~~---~~~~lrl~~Y 147 (286)
.|.. ..|.||+.+++| +||+++++|.+.+.. ..+.+|++||
T Consensus 82 ~d~kE~~~~~~~p~~-~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~Y 160 (303)
T PLN02403 82 VDWESSFFIWHRPTS-NINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVGTKVAKY 160 (303)
T ss_pred ccHhhhcccccCCcc-chhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccceeeeEcC
Confidence 0100 146799877777 899999999888762 3346999999
Q ss_pred CCCCCCCcccCcccccCCCcEEEEecC-CCCCeEEEECCeEEEEeecC-CeEEEEechhHHHhhCCccccccceEeeCCC
Q 042088 148 PLCPQPELTYGLPCQTDPNVITILLQD-DVPGLQVLINGRWVAVNPIS-RTFTVNIGGQIQVLSNDRYKSVLHRAIVNCN 225 (286)
Q Consensus 148 pp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V~p~p-g~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~ 225 (286)
|+++.++..+|+++|||+|+||||+|+ +++||||+++|+|++|+|.| |++|||+||+||+||||+|||++|||+.+.+
T Consensus 161 P~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~ 240 (303)
T PLN02403 161 PECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKN 240 (303)
T ss_pred CCCCCcccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCC
Confidence 999888778899999999999999997 59999999999999999999 6999999999999999999999999999888
Q ss_pred CceeeeEEeecCCCCCeEecCCcccccCCCCCccHHHHHHHHHh-ccCCCchhh
Q 042088 226 KERISIPTIYCPSPDAMIGPAPHLINDMLILPTTGTLHIASTTR-NSGTGDLQL 278 (286)
Q Consensus 226 ~~R~Si~~F~~P~~d~~i~pl~~~~~~~~~~~~t~~e~~~~~~~-~~~~~~~~~ 278 (286)
.+|||++||++|+.|++|+|+++++.. +++|++||+..+.. +...++..+
T Consensus 241 ~~R~Si~~F~~p~~d~~i~pl~~~~~~---~~~~~~eyl~~~~~~~~~~~~~~~ 291 (303)
T PLN02403 241 GSRLSIATFYNPAGDAIISPAPKLLYP---SNYRFQDYLKLYSTTKFGDKGPRF 291 (303)
T ss_pred CCEEEEEEEEcCCCCCeEeCchhhCCC---CCccHHHHHHHHHHhccccccchH
Confidence 889999999999999999999988642 24899999998875 444445444
No 20
>PLN02485 oxidoreductase
Probab=100.00 E-value=4.6e-61 Score=447.87 Aligned_cols=236 Identities=29% Similarity=0.435 Sum_probs=203.9
Q ss_pred CCCCceEeCCCCCCC----------ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhh----
Q 042088 38 DDCIPQIDLRYLNGS----------NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRL---- 103 (286)
Q Consensus 38 ~~~iPvIDls~l~~~----------~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~---- 103 (286)
...||+|||+.|.++ ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|.|..
T Consensus 5 ~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~ 84 (329)
T PLN02485 5 FKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMT 84 (329)
T ss_pred CCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccc
Confidence 457999999988531 245689999999999999999999999999999999999999999955432
Q ss_pred ------ccCC------------------------Cc--------cccCcCCCCCccc-----------------------
Q 042088 104 ------HCYP------------------------LE--------DYMHEWATNPQSF----------------------- 122 (286)
Q Consensus 104 ------~~~p------------------------~~--------~~~~~WP~~~~~f----------------------- 122 (286)
+|.+ .. ..+|.||+.+++|
T Consensus 85 ~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~~a 164 (329)
T PLN02485 85 PAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIA 164 (329)
T ss_pred CCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 00 0168999877777
Q ss_pred -cCCCCCChhHHhh-cCCCccceeeccCCCCC----CCcccCcccccCCCcEEEEecC-CCCCeEEE-ECCeEEEEeecC
Q 042088 123 -SLGLERDYPIKAL-GNHGQHMAINYCPLCPQ----PELTYGLPCQTDPNVITILLQD-DVPGLQVL-INGRWVAVNPIS 194 (286)
Q Consensus 123 -~Lgl~~~~~~~~~-~~~~~~lrl~~Ypp~~~----~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~-~~g~W~~V~p~p 194 (286)
+||+++++|.+.+ .+..+.||++||||++. ++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.|
T Consensus 165 ~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~p 244 (329)
T PLN02485 165 LALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPIP 244 (329)
T ss_pred HHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCCC
Confidence 8999988887764 44567899999999976 4568999999999999999997 58999999 789999999999
Q ss_pred CeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccc--cC---CCCCccHHHHHHHHHh
Q 042088 195 RTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLIN--DM---LILPTTGTLHIASTTR 269 (286)
Q Consensus 195 g~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~--~~---~~~~~t~~e~~~~~~~ 269 (286)
|++|||+||+||+||||+||||+|||+.++..+|||++||++|+.|++|+|++++++ ++ +|+++|++||+.+|+.
T Consensus 245 g~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~ 324 (329)
T PLN02485 245 GTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVL 324 (329)
T ss_pred CcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHHHH
Confidence 999999999999999999999999999887889999999999999999999999886 32 6899999999999998
Q ss_pred ccCC
Q 042088 270 NSGT 273 (286)
Q Consensus 270 ~~~~ 273 (286)
+.+.
T Consensus 325 ~~~~ 328 (329)
T PLN02485 325 TNFA 328 (329)
T ss_pred Hhhc
Confidence 8754
No 21
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=9.1e-61 Score=445.69 Aligned_cols=230 Identities=27% Similarity=0.421 Sum_probs=200.0
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc-------cCC---
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH-------CYP--- 107 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~-------~~p--- 107 (286)
..+||+|||+. .+..++|.+||++||||||+||||+.++++++++.+++||+||.|.|... |.+
T Consensus 24 ~~~iPvIDls~------~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~~~~Gy~~~~~ 97 (335)
T PLN02156 24 PVLIPVIDLTD------SDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPPDPFGYGTKRI 97 (335)
T ss_pred CCCCCcccCCC------hHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCCCCcccCcccc
Confidence 34699999984 23468999999999999999999999999999999999999999665431 100
Q ss_pred ------------------Cc-c--ccCcCCCCCccc------------------------cCCCCC-ChhHHhhc--CCC
Q 042088 108 ------------------LE-D--YMHEWATNPQSF------------------------SLGLER-DYPIKALG--NHG 139 (286)
Q Consensus 108 ------------------~~-~--~~~~WP~~~~~f------------------------~Lgl~~-~~~~~~~~--~~~ 139 (286)
.. . ..|.||..+++| +||+++ ++|.+++. ...
T Consensus 98 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~~~~~ 177 (335)
T PLN02156 98 GPNGDVGWLEYILLNANLCLESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKVKESD 177 (335)
T ss_pred CCCCCCCceeeEeeecCCccccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcCCCcc
Confidence 00 0 147799876677 899964 78888775 345
Q ss_pred ccceeeccCCCCCC--CcccCcccccCCCcEEEEecCCCCCeEEE-ECCeEEEEeecCCeEEEEechhHHHhhCCccccc
Q 042088 140 QHMAINYCPLCPQP--ELTYGLPCQTDPNVITILLQDDVPGLQVL-INGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSV 216 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~--~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~ 216 (286)
+.+|+||||+|+.. +..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+||||+|||+
T Consensus 178 ~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt 257 (335)
T PLN02156 178 SCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSV 257 (335)
T ss_pred ceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeecc
Confidence 78999999999863 35799999999999999999999999998 7999999999999999999999999999999999
Q ss_pred cceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHHHhccCC
Q 042088 217 LHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIASTTRNSGT 273 (286)
Q Consensus 217 ~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~~~~~~~ 273 (286)
.|||+.+.+.+|||++||+.|+.|++|+|++++++++ +|+++|++||+.+++.+...
T Consensus 258 ~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~~ 317 (335)
T PLN02156 258 KHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLG 317 (335)
T ss_pred ceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhccCC
Confidence 9999988888999999999999999999999998866 68999999999999988766
No 22
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=2.8e-60 Score=437.25 Aligned_cols=234 Identities=27% Similarity=0.396 Sum_probs=201.6
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc--------cCCCc
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH--------CYPLE 109 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~--------~~p~~ 109 (286)
..+||+|||+.+. +.+++|.+||++||||||+||||+.++++++++.+++||+||.|.|... |.+..
T Consensus 3 ~~~iPvIDls~~~-----~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~~~~ 77 (300)
T PLN02365 3 EVNIPTIDLEEFP-----GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPS 77 (300)
T ss_pred cCCCCEEEChhhH-----HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCCCcC
Confidence 4569999999862 3469999999999999999999999999999999999999999776531 21110
Q ss_pred ------------c-----ccCcCCC---CCccc------------------------cCCC-CCChhHHhhcCCCcccee
Q 042088 110 ------------D-----YMHEWAT---NPQSF------------------------SLGL-ERDYPIKALGNHGQHMAI 144 (286)
Q Consensus 110 ------------~-----~~~~WP~---~~~~f------------------------~Lgl-~~~~~~~~~~~~~~~lrl 144 (286)
+ ..+.||. .+++| +||+ ++++|.+. .+.+|+
T Consensus 78 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~----~~~lr~ 153 (300)
T PLN02365 78 EVNPLYEALGLYDMASPQAVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW----PSQFRI 153 (300)
T ss_pred CCCCchhheecccccCchhhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc----ccceee
Confidence 0 0234442 23456 8999 77788763 468999
Q ss_pred eccCCCCCCCcccCcccccCCCcEEEEecCC-CCCeEEEE--CCeEEEEeecCCeEEEEechhHHHhhCCccccccceEe
Q 042088 145 NYCPLCPQPELTYGLPCQTDPNVITILLQDD-VPGLQVLI--NGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAI 221 (286)
Q Consensus 145 ~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~-~~GLqV~~--~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~ 221 (286)
+|||+++.++..+|+++|||+|+||||+||+ ++||||+. +|+|++|+|.||++|||+||+||+||||+||||+|||+
T Consensus 154 ~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv 233 (300)
T PLN02365 154 NKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQ 233 (300)
T ss_pred eecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeE
Confidence 9999998888889999999999999999984 99999984 68999999999999999999999999999999999999
Q ss_pred eCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHHHhccCCCchhhhh
Q 042088 222 VNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIASTTRNSGTGDLQLKH 280 (286)
Q Consensus 222 ~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~~~~~~~~~~~~~~ 280 (286)
.++..+|||++||+.|+.|++|+|++++++++ .|++++++||+..++.+...+.+.++|
T Consensus 234 ~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~ 295 (300)
T PLN02365 234 CKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALAL 295 (300)
T ss_pred cCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHhh
Confidence 88778999999999999999999999998765 589999999999999999888877754
No 23
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.6e-60 Score=443.01 Aligned_cols=235 Identities=28% Similarity=0.395 Sum_probs=202.7
Q ss_pred CCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhh--------ccCC-
Q 042088 37 LDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRL--------HCYP- 107 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~--------~~~p- 107 (286)
...+||+|||+.. ++..++++|.+||+++|||||+||||+.++++++++.+++||+||.|.|.. +|.+
T Consensus 11 ~~~~iP~IDl~~~---~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~ 87 (332)
T PLN03002 11 KVSSLNCIDLAND---DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPV 87 (332)
T ss_pred CCCCCCEEeCCch---hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCcc
Confidence 3458999999953 456789999999999999999999999999999999999999999965432 1211
Q ss_pred --------------------------Ccc--------ccCcCCCC--Cccc------------------------cCCCC
Q 042088 108 --------------------------LED--------YMHEWATN--PQSF------------------------SLGLE 127 (286)
Q Consensus 108 --------------------------~~~--------~~~~WP~~--~~~f------------------------~Lgl~ 127 (286)
..+ .+|.||+. .++| +||++
T Consensus 88 ~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 167 (332)
T PLN03002 88 LDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLD 167 (332)
T ss_pred cccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 110 14789974 4667 89999
Q ss_pred CChhHH--hhcCCCccceeeccCCCCCCC-cccCcccccCCCcEEEEecCCCCCeEEEE-----CCeEEEEeecCCeEEE
Q 042088 128 RDYPIK--ALGNHGQHMAINYCPLCPQPE-LTYGLPCQTDPNVITILLQDDVPGLQVLI-----NGRWVAVNPISRTFTV 199 (286)
Q Consensus 128 ~~~~~~--~~~~~~~~lrl~~Ypp~~~~~-~~~g~~~HtD~~~lTlL~qd~~~GLqV~~-----~g~W~~V~p~pg~~vV 199 (286)
+++|.+ .+..+.+.||++|||+|+.++ ..+|+++|||+|+||||+||+++||||+. +|+|++|+|.||++||
T Consensus 168 ~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VV 247 (332)
T PLN03002 168 VGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIV 247 (332)
T ss_pred hHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEE
Confidence 999986 445566789999999998765 47999999999999999999999999984 3689999999999999
Q ss_pred EechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC---CCCCccHHHHHHHHHhccCCCc
Q 042088 200 NIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM---LILPTTGTLHIASTTRNSGTGD 275 (286)
Q Consensus 200 nvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~~~t~~e~~~~~~~~~~~~~ 275 (286)
|+||+||+||||+||||+|||+.+. .+|||++||++|+.|++|+|++++++++ +|+++|++||+.+|+.+.+.+.
T Consensus 248 NiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~~~~~ 325 (332)
T PLN03002 248 NLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEETHAKL 325 (332)
T ss_pred EHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999765 5799999999999999999999998866 5899999999999998887643
No 24
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=1.4e-58 Score=414.91 Aligned_cols=213 Identities=33% Similarity=0.497 Sum_probs=190.9
Q ss_pred CCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhh----------
Q 042088 37 LDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRL---------- 103 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~---------- 103 (286)
.+..||+|||+.+..+ ++..++++|++||+++|||||+||||+.++++++++.+++||+||.|.|..
T Consensus 2 ~~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~r 81 (322)
T COG3491 2 STRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHR 81 (322)
T ss_pred CCCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCcccc
Confidence 4568999999998764 678999999999999999999999999999999999999999999954431
Q ss_pred ccCC------------------------------C--c-cccCcCCCCCccc------------------------cCCC
Q 042088 104 HCYP------------------------------L--E-DYMHEWATNPQSF------------------------SLGL 126 (286)
Q Consensus 104 ~~~p------------------------------~--~-~~~~~WP~~~~~f------------------------~Lgl 126 (286)
+|.+ . . +.+|.|| ..++| +|++
T Consensus 82 GY~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r~~ll~~~~~~~~~~~rLL~aiA~~LdL 160 (322)
T COG3491 82 GYTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLRDALLQYYRAMTAVGLRLLRAIALGLDL 160 (322)
T ss_pred ccccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1100 0 0 1289999 56666 8999
Q ss_pred CCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEE-ECCeEEEEeecCCeEEEEechhH
Q 042088 127 ERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVL-INGRWVAVNPISRTFTVNIGGQI 205 (286)
Q Consensus 127 ~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L 205 (286)
++++|++.+.++.+.||+++||+.+..+...|.|+|||+|+||||+||+++||||+ .+|+|++|+|.||++|||+||||
T Consensus 161 ~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmL 240 (322)
T COG3491 161 PEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDML 240 (322)
T ss_pred ChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEeHHHHH
Confidence 99999999888999999999999988888889999999999999999999999999 56999999999999999999999
Q ss_pred HHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCccc
Q 042088 206 QVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLI 250 (286)
Q Consensus 206 ~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~ 250 (286)
|+||||+|+||+|||+.|+..+||||+||+.|+.|+.|.|+.++.
T Consensus 241 e~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~ 285 (322)
T COG3491 241 ERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLC 285 (322)
T ss_pred HHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCC
Confidence 999999999999999999888999999999999999999876543
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.1e-57 Score=424.09 Aligned_cols=223 Identities=35% Similarity=0.535 Sum_probs=190.3
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhcc--------C---
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLHC--------Y--- 106 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~~--------~--- 106 (286)
..+||+|||+.+ .+++|.+||++||||||+||||+.++++++++.+++||+||.|.|.... .
T Consensus 36 ~~~IPvIDls~~-------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~ 108 (341)
T PLN02984 36 DIDIPVIDMECL-------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGT 108 (341)
T ss_pred cCCCCeEeCcHH-------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCc
Confidence 556999999964 2589999999999999999999999999999999999999997654311 0
Q ss_pred ----CC------------cc----c---------cCcCCCC---Cccc------------------------cCCCC--C
Q 042088 107 ----PL------------ED----Y---------MHEWATN---PQSF------------------------SLGLE--R 128 (286)
Q Consensus 107 ----p~------------~~----~---------~~~WP~~---~~~f------------------------~Lgl~--~ 128 (286)
+. .+ + .+.||.. .++| +||++ +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~~~~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~ 188 (341)
T PLN02984 109 PALTPSGKALSRGPQESNVNWVEGFNIPLSSLSLLQTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKTLSLELSG 188 (341)
T ss_pred ccccccccccccccccCCCCeeeEEeCcCCchhhhhhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcch
Confidence 00 00 0 1124221 2344 88998 8
Q ss_pred ChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHh
Q 042088 129 DYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVL 208 (286)
Q Consensus 129 ~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~ 208 (286)
++|.+++..+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+||+|
T Consensus 189 ~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~w 268 (341)
T PLN02984 189 DQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVI 268 (341)
T ss_pred hHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEeeCCceEECCCCCCeEEEECChhhhhh
Confidence 99999988888899999999999877789999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccccceEe-eCCCCceeeeEEeecCCCCCeEecCCcccccCCCCCccHHHHHHHHHhccCCC
Q 042088 209 SNDRYKSVLHRAI-VNCNKERISIPTIYCPSPDAMIGPAPHLINDMLILPTTGTLHIASTTRNSGTG 274 (286)
Q Consensus 209 TnG~~ks~~HRV~-~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~~~~~t~~e~~~~~~~~~~~~ 274 (286)
|||+||||+|||+ .+...+|||++||++|+.|++|+| ..|+++|++||+.++.......
T Consensus 269 TNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~p-------~~y~p~t~~e~l~~~~~~~~~~ 328 (341)
T PLN02984 269 SDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIKS-------SKYKPFTYSDFEAQVQLDVKTL 328 (341)
T ss_pred cCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEcc-------CCcCcccHHHHHHHHHhhhhcc
Confidence 9999999999996 455678999999999999999986 2689999999999988555443
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8e-50 Score=360.76 Aligned_cols=167 Identities=37% Similarity=0.585 Sum_probs=154.3
Q ss_pred cCcCCCCCccc------------------------cCCCCCChhHHhhcCCCccceeeccCCCCCCCcccCcccccCCCc
Q 042088 112 MHEWATNPQSF------------------------SLGLERDYPIKALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNV 167 (286)
Q Consensus 112 ~~~WP~~~~~f------------------------~Lgl~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~ 167 (286)
+|.||+.+++| +||+++++|.+.+....+.+|++|||||+.++..+|+++|||+|+
T Consensus 64 ~n~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~ 143 (262)
T PLN03001 64 PSHWPDFPPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGA 143 (262)
T ss_pred hhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCe
Confidence 57899877777 899999999998887778899999999998888999999999999
Q ss_pred EEEEecCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCC
Q 042088 168 ITILLQDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAP 247 (286)
Q Consensus 168 lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~ 247 (286)
||||+||+++||||+++|+|++|+|.||++||||||+||+||||+|||++|||+.+..++|||++||++|+.|++|+|++
T Consensus 144 lTlL~qd~v~GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~ 223 (262)
T PLN03001 144 ITLLIQDDVEGLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPAS 223 (262)
T ss_pred eEEEEeCCCCceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCCh
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred cccccC---CCCCccHHHHHHHHHhccCCCchhh
Q 042088 248 HLINDM---LILPTTGTLHIASTTRNSGTGDLQL 278 (286)
Q Consensus 248 ~~~~~~---~~~~~t~~e~~~~~~~~~~~~~~~~ 278 (286)
++++++ .|++++++||+..++.+...+...+
T Consensus 224 e~v~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~ 257 (262)
T PLN03001 224 ALSTESFPPRYCEIVYGEYVSSWYSKGPEGKRNI 257 (262)
T ss_pred HhcCCCCCCcCCCccHHHHHHHHHHhccCCcchh
Confidence 999876 5899999999999988776655443
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.93 E-value=9e-26 Score=174.27 Aligned_cols=95 Identities=39% Similarity=0.655 Sum_probs=76.4
Q ss_pred ccceeeccCCCCCCCcccCcccccCC--CcEEEEecCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCcccccc
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDP--NVITILLQDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVL 217 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~--~~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~ 217 (286)
+.||+++||+ ++...|+++|+|. +++|+|+|++++||||..+++|+.|++.++.++||+||+|++||||.++|+.
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~ 78 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATL 78 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccccccCccCccceeeeeceeeeecccCCccCCce
Confidence 4689999998 5667899999999 9999999999999999998999999999999999999999999999999999
Q ss_pred ceEeeCCCCceeeeEEeecC
Q 042088 218 HRAIVNCNKERISIPTIYCP 237 (286)
Q Consensus 218 HRV~~~~~~~R~Si~~F~~P 237 (286)
|||+.+....|+|++||++|
T Consensus 79 HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 79 HRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp EEEE--STS-EEEEEEEEE-
T ss_pred eeeEcCCCCCEEEEEEEECC
Confidence 99999887899999999987
No 28
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.79 E-value=6.4e-19 Score=141.39 Aligned_cols=99 Identities=19% Similarity=0.481 Sum_probs=81.8
Q ss_pred chhHHHHhccCCCCCCcccCCCCCCCCCCCCCCCCCCceEeCCCCCCC--ChhHHHHHHHHHHhhcCeEEEEeCCCCHHH
Q 042088 5 NSLVFNVASSVSSIPSNYIRPASNRPNLDGVYLDDCIPQIDLRYLNGS--NRSDVVKQTGQACQDYGFFRTENNGIPEEV 82 (286)
Q Consensus 5 ~~~v~~~~~~~~~ip~~~~~p~~~~~~~~~~~~~~~iPvIDls~l~~~--~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~ 82 (286)
.+.|+++.+ ...+|.+|+++..+++.........+||+|||+.+.++ .+.+++++|.+||++||||||+||||+.++
T Consensus 3 ~~~~~~l~~-~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~el 81 (120)
T PLN03176 3 PSTLTALAE-EKTLQASFVRDEDERPKVAYNQFSNEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKL 81 (120)
T ss_pred hhHHHHHhc-cCCCCHhhcCChhhCcCccccccCCCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHH
Confidence 456666666 37899999999988874321123457999999998754 356789999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCChhhhhhc
Q 042088 83 MDKMLCLSRQFFHFPEDYVRLH 104 (286)
Q Consensus 83 ~~~~~~~~~~fF~Lp~e~~~~~ 104 (286)
++++++.+++||+||.+.+...
T Consensus 82 id~~~~~~~~FF~LP~e~K~k~ 103 (120)
T PLN03176 82 VSEMTTLAKEFFALPPEEKLRF 103 (120)
T ss_pred HHHHHHHHHHHHCCCHHHHHhc
Confidence 9999999999999999887654
No 29
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.61 E-value=3.7e-16 Score=123.94 Aligned_cols=63 Identities=37% Similarity=0.747 Sum_probs=55.6
Q ss_pred CceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc
Q 042088 41 IPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH 104 (286)
Q Consensus 41 iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~ 104 (286)
||||||+. ....+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|.|...
T Consensus 1 iPvIDls~-~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~ 63 (116)
T PF14226_consen 1 IPVIDLSP-DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKY 63 (116)
T ss_dssp --EEEHGG-CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHH
T ss_pred CCeEECCC-CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHh
Confidence 79999997 2226789999999999999999999999999999999999999999999877654
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.60 E-value=0.0019 Score=49.29 Aligned_cols=78 Identities=21% Similarity=0.162 Sum_probs=53.1
Q ss_pred ceeeccCCCCCCCcccCcccccCC-----CcEEEEec--CCC-----CCeEEEE----CCeEEEEe-----ecCCeEEEE
Q 042088 142 MAINYCPLCPQPELTYGLPCQTDP-----NVITILLQ--DDV-----PGLQVLI----NGRWVAVN-----PISRTFTVN 200 (286)
Q Consensus 142 lrl~~Ypp~~~~~~~~g~~~HtD~-----~~lTlL~q--d~~-----~GLqV~~----~g~W~~V~-----p~pg~~vVn 200 (286)
|++++|++. -.+.+|+|. ..+|+++. +.. +.|++.. ++....++ |.+|.+|+.
T Consensus 1 ~~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 467777543 347899998 58888843 222 4477663 34556666 999999987
Q ss_pred echhHHHhhCCccccccceEeeC-CCCceeeeEEeec
Q 042088 201 IGGQIQVLSNDRYKSVLHRAIVN-CNKERISIPTIYC 236 (286)
Q Consensus 201 vGd~L~~~TnG~~ks~~HRV~~~-~~~~R~Si~~F~~ 236 (286)
-+ ..++|+|... ....|+++..|++
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 66 3479999887 6788999999874
No 31
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=91.76 E-value=0.55 Score=39.91 Aligned_cols=67 Identities=21% Similarity=0.040 Sum_probs=45.0
Q ss_pred CcccccCC----CcEEEEec----CCCCCeEEEEC-----CeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCC
Q 042088 158 GLPCQTDP----NVITILLQ----DDVPGLQVLIN-----GRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNC 224 (286)
Q Consensus 158 g~~~HtD~----~~lTlL~q----d~~~GLqV~~~-----g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~ 224 (286)
....|.|. ..+|++.- |..+|+-+.+. +. +.|.+.+|++++-.|..+ .|-|..-.
T Consensus 86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g-~~~~~~~GtVl~~~~~~~-----------~Hgvtpv~ 153 (171)
T PF12851_consen 86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILG-VAFAYQPGTVLIFCAKRE-----------LHGVTPVE 153 (171)
T ss_pred CccceecCCCCCCCeEEEEecCCccccCceEeccccccccCC-EEEecCCCcEEEEcccce-----------eeecCccc
Confidence 45678887 56666654 23567666654 43 678899999999988543 34443221
Q ss_pred -----CCceeeeEEeec
Q 042088 225 -----NKERISIPTIYC 236 (286)
Q Consensus 225 -----~~~R~Si~~F~~ 236 (286)
+.+|+|++||++
T Consensus 154 ~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 154 SPNRNHGTRISLVFYQH 170 (171)
T ss_pred CCCCCCCeEEEEEEEeE
Confidence 368999999986
No 32
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=91.40 E-value=0.88 Score=38.26 Aligned_cols=81 Identities=19% Similarity=0.083 Sum_probs=54.6
Q ss_pred ccceeeccCCCCCCCcccCcccccCCC--------cEEEEec--C-CCCC-eEEEECC--eEEEEeecCCeEEEEe-chh
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDPN--------VITILLQ--D-DVPG-LQVLING--RWVAVNPISRTFTVNI-GGQ 204 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~--------~lTlL~q--d-~~~G-LqV~~~g--~W~~V~p~pg~~vVnv-Gd~ 204 (286)
..+++.+|.+. -...+|.|.. .+|+++. + ..|| |.+...+ .-..|.|..|.+|+.- ++
T Consensus 83 ~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~~~~~~~v~P~~G~~v~f~~~~- 155 (178)
T smart00702 83 EDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLGLMVCATVKPKKGDLLFFPSGR- 155 (178)
T ss_pred cceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCCCccceEEeCCCCcEEEEeCCC-
Confidence 45778888753 2367899965 6887664 3 2344 5555333 2568999999888754 32
Q ss_pred HHHhhCCccccccceEeeCCCCceeeeEEeec
Q 042088 205 IQVLSNDRYKSVLHRAIVNCNKERISIPTIYC 236 (286)
Q Consensus 205 L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 236 (286)
+.++|.|.......|+++..+++
T Consensus 156 ---------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 156 ---------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred ---------CCccccCCcceeCCEEEEEEEEC
Confidence 16789997665578999988764
No 33
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=88.19 E-value=2.9 Score=37.22 Aligned_cols=47 Identities=15% Similarity=0.046 Sum_probs=34.7
Q ss_pred CCeEEE-ECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeec
Q 042088 177 PGLQVL-INGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYC 236 (286)
Q Consensus 177 ~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 236 (286)
|.|.+. ..|. ..|+|..|.+|+.-. +.+|+|.......||++.+.+.
T Consensus 130 GEl~~~~~~g~-~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 130 GELVIEDTYGE-HRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CceEEecCCCc-EEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 447776 3344 678888888887764 4889998766678999887765
No 34
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=74.98 E-value=5.2 Score=30.44 Aligned_cols=37 Identities=24% Similarity=0.247 Sum_probs=23.4
Q ss_pred CeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCC-CceeeeEE
Q 042088 185 GRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCN-KERISIPT 233 (286)
Q Consensus 185 g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~-~~R~Si~~ 233 (286)
..+..++|.+|.+||.-+. ..|+|..... .+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 4678899999999988875 4799987654 58999986
No 35
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=74.63 E-value=2.7 Score=40.70 Aligned_cols=55 Identities=15% Similarity=0.177 Sum_probs=39.1
Q ss_pred CCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhc
Q 042088 37 LDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFH 95 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 95 (286)
...-||.|||+++.++ ...++..+.+++.|++.|.|+ ||.+...+..+..++|.+
T Consensus 46 G~~~IP~i~f~di~~~---~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 46 GSSIIPEIDFADIENG---GVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp T--SS-EEEHHHHHCT------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeHHHHhCC---CCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 3557999999998653 456888889999999999887 888877777777777654
No 36
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=72.63 E-value=8 Score=32.67 Aligned_cols=85 Identities=14% Similarity=0.040 Sum_probs=43.3
Q ss_pred ccceeeccCCCCCCCcccCcccccCCCcE-------EEEecCCCCCeEEEE---CCeEEEEeecCCeEEEEechhHHHhh
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDPNVI-------TILLQDDVPGLQVLI---NGRWVAVNPISRTFTVNIGGQIQVLS 209 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~l-------TlL~qd~~~GLqV~~---~g~W~~V~p~pg~~vVnvGd~L~~~T 209 (286)
..+-+|+|.+ +. ++++|.|...+ ||=+- ...=+.+.. .+..+.+...+|+++|.-|++=..|
T Consensus 97 n~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG-~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~- 168 (194)
T PF13532_consen 97 NQCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLG-SSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW- 168 (194)
T ss_dssp SEEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEE-S-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-
T ss_pred CEEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEc-cCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-
Confidence 4566899975 23 89999987633 22111 011133332 3689999999999999999985555
Q ss_pred CCccccccceEee--CCCCceeeeEE
Q 042088 210 NDRYKSVLHRAIV--NCNKERISIPT 233 (286)
Q Consensus 210 nG~~ks~~HRV~~--~~~~~R~Si~~ 233 (286)
.|.-+... .... .....|+|+.|
T Consensus 169 H~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 169 HGIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp EEE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred eEcccccC-CccccccCCCCEEEEEe
Confidence 44333221 0000 01236999876
No 37
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=69.08 E-value=26 Score=30.90 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=46.1
Q ss_pred ccceeeccCCCCCCCcccCcccccCCC-------cEEEEecCCCCC-eEEE---ECCeEEEEeecCCeEEEEechhHHHh
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDPN-------VITILLQDDVPG-LQVL---INGRWVAVNPISRTFTVNIGGQIQVL 208 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~-------~lTlL~qd~~~G-LqV~---~~g~W~~V~p~pg~~vVnvGd~L~~~ 208 (286)
..+-+|+|.+. . +++.|.|-. ++++=+ +.+. +.+. +++.+..+.-..|.++|.-|+. +.|
T Consensus 116 ~a~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSL--G~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~ 186 (213)
T PRK15401 116 DACLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSL--GLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLR 186 (213)
T ss_pred CEEEEEeccCc-----C-ccccccCCCcccCCCCEEEEeC--CCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhe
Confidence 34668999743 2 789999942 111111 1122 2222 3456899999999999999985 433
Q ss_pred hCCccccccceEeeC-------CCCceeeeEE
Q 042088 209 SNDRYKSVLHRAIVN-------CNKERISIPT 233 (286)
Q Consensus 209 TnG~~ks~~HRV~~~-------~~~~R~Si~~ 233 (286)
.|.|... .+..|+|+.|
T Consensus 187 --------~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 187 --------YHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred --------eccCCcCCCCcCCCCCCCeEEEEe
Confidence 3444221 1236999876
No 38
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=66.67 E-value=7.7 Score=33.00 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=30.7
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++++... ..++.++++.+++++...+.+.|||+
T Consensus 120 ~v~v~~~~~~---g~~~la~~~~~~l~~~~~vll~nHGv 155 (184)
T PRK08333 120 KIPILPFRPA---GSVELAEQVAEAMKEYDAVIMERHGI 155 (184)
T ss_pred CEeeecCCCC---CcHHHHHHHHHHhccCCEEEEcCCCC
Confidence 6999998753 35688999999999999999999996
No 39
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=66.46 E-value=13 Score=32.40 Aligned_cols=38 Identities=26% Similarity=0.217 Sum_probs=30.0
Q ss_pred CeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCC-CCceeeeEEe
Q 042088 185 GRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNC-NKERISIPTI 234 (286)
Q Consensus 185 g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F 234 (286)
..|+.+.|.+|.+|+.-.- -.|+|..+. +.+|+|++|=
T Consensus 159 ~~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFN 197 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFN 197 (201)
T ss_pred CccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEe
Confidence 4588999999999976553 379998875 4789999973
No 40
>PRK08130 putative aldolase; Validated
Probab=63.91 E-value=9.7 Score=33.22 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=30.7
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++++... ...++++.+.+++++...+.+.|||+
T Consensus 127 ~i~v~~y~~~---g~~~la~~~~~~l~~~~~vll~nHGv 162 (213)
T PRK08130 127 HVPLIPYYRP---GDPAIAEALAGLAARYRAVLLANHGP 162 (213)
T ss_pred ccceECCCCC---ChHHHHHHHHHHhccCCEEEEcCCCC
Confidence 6999988653 35688999999999999999999996
No 41
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=57.81 E-value=16 Score=34.61 Aligned_cols=51 Identities=14% Similarity=0.137 Sum_probs=39.1
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHH
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQF 93 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f 93 (286)
..++|.||++.+.+ ..+.+.++.+++.++|++.+.+-.++.+.+ .+.++.|
T Consensus 107 ~~~~~~~d~~~~~~--~~~~~~~~~~~l~~~G~v~~rg~~~~~~~~---~~~~~~~ 157 (366)
T TIGR02409 107 ELSLPKFDHEAVMK--DDSVLLDWLSAVRDVGIAVLKGAPTKPGAV---EKLGKRI 157 (366)
T ss_pred cccCCceeHHHHhC--CHHHHHHHHHHHHhccEEEEeCCCCCHHHH---HHHHHHh
Confidence 35789999988764 356788899999999999999988876543 3445555
No 42
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=53.12 E-value=17 Score=31.91 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=30.6
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
.+|++++... ...++++.+.+++.+...+.+.|||+-
T Consensus 127 ~v~~~~y~~~---gs~ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 127 DVRCTEYAAS---GTPEVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred ceeeecCCCC---CcHHHHHHHHHHhCcCCEEEEcCCCCe
Confidence 4888887643 347899999999999999999999963
No 43
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=48.84 E-value=32 Score=30.19 Aligned_cols=66 Identities=24% Similarity=0.243 Sum_probs=40.4
Q ss_pred ccceeeccCCCC-CCCcccCcccccCCCcEEEEecCCCCCeEEE--ECCeEEEEeecCCeEEEEechhHHHhhC
Q 042088 140 QHMAINYCPLCP-QPELTYGLPCQTDPNVITILLQDDVPGLQVL--INGRWVAVNPISRTFTVNIGGQIQVLSN 210 (286)
Q Consensus 140 ~~lrl~~Ypp~~-~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~--~~g~W~~V~p~pg~~vVnvGd~L~~~Tn 210 (286)
-.+|.+||-|.. +++-...+..+ -.++.|+..+-..+. +.|.=+.|||.=|..++|+||-=-++.|
T Consensus 90 G~~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 90 GAMRELHYHPNADEPEIYYVLKGE-----GRMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDEPLVFLN 158 (209)
T ss_pred CcccccccCCCCCcccEEEEEecc-----EEEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCCCEEEEE
Confidence 357777775443 34433443322 234455544445554 5688899999999999999985444444
No 44
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=46.69 E-value=28 Score=29.44 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=28.5
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++ +... ...+.++.+.+++.+.-.+.+.|||+
T Consensus 115 ~ipv~-~~~~---~~~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 115 TIPVV-GGDI---GSGELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CEeEE-eCCC---CCHHHHHHHHHHHhhCCEEEEcCCCc
Confidence 58988 4332 34688899999999999999999996
No 45
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=46.60 E-value=37 Score=29.60 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=30.0
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
.||++.+... +..++++.+.+++.+...+.+.|||+-
T Consensus 122 ~v~~~~y~~~---gs~~la~~~~~~l~~~~~vLl~nHGv~ 158 (215)
T PRK08087 122 SIPCAPYATF---GTRELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_pred CceeecCCCC---CCHHHHHHHHHHhCcCCEEEecCCCCE
Confidence 5888887654 346888999999998899999999963
No 46
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=45.71 E-value=12 Score=31.45 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=30.0
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHh-hcCeEEEEeCCC
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQ-DYGFFRTENNGI 78 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~-~~Gff~l~nhGi 78 (286)
..||+++.... ...+.++.+.++++ +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~---~~~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPP---GSEELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THST---TCHHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeeccccc---cchhhhhhhhhhhcCCceEEeecCCce
Confidence 57999999763 23577899999999 889999999995
No 47
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=45.41 E-value=26 Score=30.57 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=29.1
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
.||++++... ...++++.+.+++.+...+.+.|||+-
T Consensus 124 ~i~~~~y~~~---gs~~la~~v~~~l~~~~~vll~nHGv~ 160 (214)
T PRK06833 124 NVRCAEYATF---GTKELAENAFEAMEDRRAVLLANHGLL 160 (214)
T ss_pred CeeeccCCCC---ChHHHHHHHHHHhCcCCEEEECCCCCE
Confidence 5777776532 456788889999999999999999963
No 48
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=40.52 E-value=34 Score=31.24 Aligned_cols=37 Identities=8% Similarity=0.065 Sum_probs=30.0
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
.||++.+... ...++++.+.+++.+...+.+.|||+-
T Consensus 179 ~i~vvpy~~p---gs~eLa~~v~~~l~~~~avLL~nHGvv 215 (274)
T PRK03634 179 GVGIVPWMVP---GTDEIGQATAEKMQKHDLVLWPKHGVF 215 (274)
T ss_pred ceeEecCCCC---CCHHHHHHHHHHhccCCEEEEcCCCCe
Confidence 5888877643 346888999999999999999999963
No 49
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=39.79 E-value=34 Score=29.84 Aligned_cols=36 Identities=8% Similarity=0.106 Sum_probs=28.6
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++.+... ...++++.+.+++.+...+.|.|||+
T Consensus 121 ~i~~v~y~~~---gs~~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYATF---GSTKLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCCC---ChHHHHHHHHHHhhhCCEEehhcCCC
Confidence 4777777654 34578888889999999999999996
No 50
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=39.10 E-value=31 Score=30.15 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=29.3
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHH--hhcCeEEEEeCCCC
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQAC--QDYGFFRTENNGIP 79 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~--~~~Gff~l~nhGi~ 79 (286)
..||++.+... ...+.++++.+++ .+...+.+.|||+-
T Consensus 129 ~~ip~~~y~~~---g~~ela~~i~~~l~~~~~~~vll~nHG~~ 168 (221)
T PRK06557 129 GPIPVGPFALI---GDEAIGKGIVETLKGGRSPAVLMQNHGVF 168 (221)
T ss_pred CCeeccCCcCC---CcHHHHHHHHHHhCcCCCCEEEECCCCce
Confidence 35888777643 3467888999999 77889999999963
No 51
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=38.16 E-value=39 Score=28.89 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=27.4
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHh---hcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQ---DYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~---~~Gff~l~nhGi 78 (286)
.||+++. . . ...++++.+.++++ +...+.+.|||+
T Consensus 126 ~vp~~~~-~--~-gs~ela~~~~~~l~~~~~~~avll~nHGv 163 (193)
T TIGR03328 126 TIPIFEN-T--Q-DIARLADSVAPYLEAYPDVPGVLIRGHGL 163 (193)
T ss_pred EEeeecC-C--C-ChHHHHHHHHHHHhcCCCCCEEEEcCCcc
Confidence 5899974 2 1 35688899999996 478999999996
No 52
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=36.46 E-value=41 Score=22.31 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCCh
Q 042088 56 DVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPE 98 (286)
Q Consensus 56 ~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~ 98 (286)
+.+..+...+...||......|+-.+...++.+..+.++.|+.
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~~ 45 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLPV 45 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-S
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcCC
Confidence 5678899999999999555567777788888888889898886
No 53
>PRK06357 hypothetical protein; Provisional
Probab=36.34 E-value=51 Score=28.87 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=27.6
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhc------CeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDY------GFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~------Gff~l~nhGi~ 79 (286)
.||++.+... ..++.++.+.+++++. ..+.+.|||+-
T Consensus 130 ~i~~~p~~~~---gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 130 KIPTLPFAPA---TSPELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred CcceecccCC---CcHHHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 4788777653 3468888888888765 48899999963
No 54
>PRK06755 hypothetical protein; Validated
Probab=36.15 E-value=44 Score=29.24 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=28.3
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
+||+|++..- ....+++.+.+++++...+.+.|||+-
T Consensus 136 ~IPiv~~~~~---~~~~la~~~~~~~~~~~avLl~~HGv~ 172 (209)
T PRK06755 136 TIPIVEDEKK---FADLLENNVPNFIEGGGVVLVHNYGMI 172 (209)
T ss_pred EEEEEeCCCc---hhHHHHHHHHhhccCCCEEEEcCCCeE
Confidence 6999988652 235667777778888888999999963
No 55
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=34.82 E-value=39 Score=29.33 Aligned_cols=35 Identities=26% Similarity=0.349 Sum_probs=27.4
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHh-hcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQ-DYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~-~~Gff~l~nhGi 78 (286)
.||+++.-. ..+++++.+.++++ +...+.+.|||+
T Consensus 137 ~vpv~~~~~----~~~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 137 HIPIIENHA----DIPTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred EEEEecCCC----CHHHHHHHHHHHhccCCcEEEECCCce
Confidence 478886211 24689999999998 888999999996
No 56
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=33.64 E-value=60 Score=30.71 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=38.7
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHh
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFF 94 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 94 (286)
..+|.+|+..+... .++...++.+++.++|+..+.|-.++.+.+.+ .++.|-
T Consensus 99 ~~~~~~~~~~~~~~-~d~~l~~~l~~l~~~G~v~~~g~~~~~~~~~~---~a~riG 150 (362)
T TIGR02410 99 LKDPSVHFKTTYDH-TDSTLKSFSKNIYKYGFTFVDNVPVTPEATEK---LCERIS 150 (362)
T ss_pred ccCCceeHHHHhcc-CHHHHHHHHHHHHhhCEEEEcCCCCCHHHHHH---HHHHhc
Confidence 34688898876542 24678899999999999999999987655444 455553
No 57
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=33.37 E-value=67 Score=29.25 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=30.0
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++.+..- ...++++.+.+++++..-+.+.|||+
T Consensus 177 ~i~vvp~~~p---Gs~eLA~~v~~~l~~~~avLL~nHGv 212 (270)
T TIGR02624 177 GVGIIPWMVP---GTNEIGEATAEKMKEHRLVLWPHHGI 212 (270)
T ss_pred ccccccCcCC---CCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 4888877653 45789999999999999999999996
No 58
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=30.80 E-value=91 Score=28.19 Aligned_cols=52 Identities=17% Similarity=0.066 Sum_probs=37.9
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhc
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFH 95 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 95 (286)
.++|.=+||+... ..+..++|.+|+.++|++.+.|-.++.+ +..+.++.|-.
T Consensus 13 Gaev~g~dl~~~l---~~~~~~~l~~~l~~~Gvlvfr~q~l~~~---~~~~~~~~~G~ 64 (277)
T PRK09553 13 GAQISGIDLTRPL---SDNQFEQLYHALLRHQVLFFRDQPITPQ---QQRDLAARFGD 64 (277)
T ss_pred eeEEeCcccCCcC---CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 3456667887532 2577899999999999999999988754 44455666654
No 59
>PRK06661 hypothetical protein; Provisional
Probab=29.21 E-value=62 Score=28.64 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=27.8
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
.||..++..... +..+.++.+.+++.+...+.+.|||+-
T Consensus 123 ~i~~~~~~~~~~-~~~~~~~~~a~~l~~~~avll~nHG~v 161 (231)
T PRK06661 123 RISYHNYNSLAL-DADKQSSRLVNDLKQNYVMLLRNHGAI 161 (231)
T ss_pred CceecCCCcccc-CchhHHHHHHHHhCCCCEEEECCCCCe
Confidence 356655543321 225678889999999999999999963
No 60
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=28.92 E-value=1.8e+02 Score=23.49 Aligned_cols=39 Identities=10% Similarity=0.195 Sum_probs=31.6
Q ss_pred hhHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHHHH
Q 042088 54 RSDVVKQTGQACQDYGFFRTENN-GIPEEVMDKMLCLSRQ 92 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~ 92 (286)
....++++.+.++++.++++.++ |++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 46788999999999998888875 8998888887775554
No 61
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=26.31 E-value=50 Score=28.50 Aligned_cols=40 Identities=13% Similarity=0.069 Sum_probs=29.5
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCC
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIP 79 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 79 (286)
..||++++..... ..++.++.+.+++.+.-.+.+.|||+-
T Consensus 121 ~~ip~~~~~~~~~-~~~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 121 GDIPCTPYMTPET-GEDEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred CCeeecCCcCCCc-cHHHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 4699998876321 235667777777888889999999963
No 62
>PRK05834 hypothetical protein; Provisional
Probab=25.44 E-value=1e+02 Score=26.54 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=25.7
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcC--eEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYG--FFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~G--ff~l~nhGi 78 (286)
+||++++....+ ..+..++.+.+++.+.. .+.+.|||+
T Consensus 121 ~ipv~~~~~~~~-~~~~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 121 EISIYDPKDFDD-WYERADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred eeeecCccccch-HHHhHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 488876554321 11245677888888755 999999996
No 63
>PRK07490 hypothetical protein; Provisional
Probab=25.21 E-value=77 Score=28.30 Aligned_cols=36 Identities=8% Similarity=-0.056 Sum_probs=27.1
Q ss_pred CCceE-eCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQI-DLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++ ++... ...+.++.+.+++.+.-.+.+.|||+
T Consensus 133 ~v~~~~~y~~~---~~~ela~~v~~~l~~~~avlL~nHG~ 169 (245)
T PRK07490 133 RVAVDTLYGGM---ALEEEGERLAGLLGDKRRLLMGNHGV 169 (245)
T ss_pred CeeeccCCCCc---CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 35654 34432 34688899999999999999999996
No 64
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=24.37 E-value=2e+02 Score=26.26 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=32.1
Q ss_pred eEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHHHH
Q 042088 43 QIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENN-GIPEEVMDKMLCLSRQ 92 (286)
Q Consensus 43 vIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~ 92 (286)
+|||+. ++...++.+-|.+.|.--|++. |.+++.++.+.+.++.
T Consensus 73 ~IDFT~------P~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 73 LIDFTT------PEATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred EEECCC------chhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 577764 5666777777888887777764 7888877777777776
No 65
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=23.68 E-value=96 Score=26.80 Aligned_cols=25 Identities=4% Similarity=0.053 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHhhcC---eEEEEeCCC
Q 042088 54 RSDVVKQTGQACQDYG---FFRTENNGI 78 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~G---ff~l~nhGi 78 (286)
.+++++.+.+++.+.. .+.|.|||+
T Consensus 144 ~~eLa~~v~~~l~~~~~~~avlL~nHGv 171 (204)
T PRK09220 144 IARLAARVAPYLDAQPLRYGYLIRGHGL 171 (204)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCce
Confidence 4788999999999864 899999996
No 66
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=23.22 E-value=1.3e+02 Score=23.67 Aligned_cols=45 Identities=20% Similarity=0.242 Sum_probs=34.0
Q ss_pred ceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 042088 42 PQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTEN-NGIPEEVMDKMLCLSRQ 92 (286)
Q Consensus 42 PvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~n-hGi~~~~~~~~~~~~~~ 92 (286)
=+|||+. .+.+....+.|.+.|.=.|++ -|.+++.++.+.+.+++
T Consensus 70 VvIDfT~------p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 70 VVIDFTN------PDAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp EEEEES-------HHHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred EEEEcCC------hHHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 4678873 577777888888889999996 59988888888776654
No 67
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=23.17 E-value=1.1e+02 Score=25.37 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=31.6
Q ss_pred cCcccccCCC--cEEEEecCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCcc----ccccceEeeCCCCceee
Q 042088 157 YGLPCQTDPN--VITILLQDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRY----KSVLHRAIVNCNKERIS 230 (286)
Q Consensus 157 ~g~~~HtD~~--~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~----ks~~HRV~~~~~~~R~S 230 (286)
..+.+|+|.+ .+++.+.=. +| .+...+.+|+.--.|..|.. -|-.|-|.+.+...|+-
T Consensus 91 ~~I~pH~d~~~~~lR~Hl~L~--------------~p--~~~~~~~v~~~~~~w~~G~~~~fD~s~~H~~~N~~~~~Rv~ 154 (163)
T PF05118_consen 91 THIKPHRDPTNLRLRLHLPLI--------------VP--NPGCYIRVGGETRHWREGECWVFDDSFEHEVWNNGDEDRVV 154 (163)
T ss_dssp EEEEEE-SS-TTEEEEEEEEC------------------STTEEEEETTEEEB--CTEEEEE-TTS-EEEEESSSS-EEE
T ss_pred CEECCeeCCCCcceEEEEEEE--------------cC--CCCeEEEECCeEEEeccCcEEEEeCCEEEEEEeCCCCCEEE
Confidence 3478899886 345443211 11 12233445555555555543 35689999988889988
Q ss_pred eEE
Q 042088 231 IPT 233 (286)
Q Consensus 231 i~~ 233 (286)
+.+
T Consensus 155 L~v 157 (163)
T PF05118_consen 155 LIV 157 (163)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 68
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=23.09 E-value=2e+02 Score=24.29 Aligned_cols=59 Identities=14% Similarity=0.055 Sum_probs=35.8
Q ss_pred ccceeeccCCCCCCCcccCcccccCCCcEE----EE-ecCCCCC-eEEE---ECCeEEEEeecCCeEEEEechh
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDPNVIT----IL-LQDDVPG-LQVL---INGRWVAVNPISRTFTVNIGGQ 204 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lT----lL-~qd~~~G-LqV~---~~g~W~~V~p~pg~~vVnvGd~ 204 (286)
..+-+|+|++. -++++|.|-.-+. |. +.=+.+. +.+. +++....+.-.+|.++|.-|+.
T Consensus 95 n~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 95 DACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred CEEEEEeecCC------CccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 45668999864 3689999953221 10 0001122 2222 2455788899999999999873
No 69
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=21.35 E-value=2.9e+02 Score=22.52 Aligned_cols=39 Identities=8% Similarity=0.164 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 042088 54 RSDVVKQTGQACQDYGFFRTEN-NGIPEEVMDKMLCLSRQ 92 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~Gff~l~n-hGi~~~~~~~~~~~~~~ 92 (286)
....++++.+.+++..++++.+ .|++...+.++....++
T Consensus 5 K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 5 KEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 4677889999999988887776 48998888887776554
No 70
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=20.31 E-value=2.6e+02 Score=25.23 Aligned_cols=41 Identities=15% Similarity=0.126 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHHhhcCe--EEEEe-CCCCHHHHHHHHHHHHHHh
Q 042088 54 RSDVVKQTGQACQDYGF--FRTEN-NGIPEEVMDKMLCLSRQFF 94 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~Gf--f~l~n-hGi~~~~~~~~~~~~~~fF 94 (286)
-......+.+++..+|| |+++| ||=....++.+.+..+..|
T Consensus 88 ~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~ 131 (250)
T COG1402 88 LIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAEL 131 (250)
T ss_pred HHHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhc
Confidence 35677888999999999 66665 8877666666665555444
No 71
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=20.21 E-value=2.5e+02 Score=23.32 Aligned_cols=39 Identities=8% Similarity=0.223 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHHHH
Q 042088 54 RSDVVKQTGQACQDYGFFRTEN-NGIPEEVMDKMLCLSRQ 92 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~Gff~l~n-hGi~~~~~~~~~~~~~~ 92 (286)
..+.+++|.+.+.++-.+++++ +|++...++++.+..|.
T Consensus 3 K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 3 KQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 4578899999999988777764 79999998888876654
No 72
>PRK15331 chaperone protein SicA; Provisional
Probab=20.07 E-value=98 Score=26.18 Aligned_cols=45 Identities=20% Similarity=0.388 Sum_probs=35.3
Q ss_pred ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCCh
Q 042088 53 NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPE 98 (286)
Q Consensus 53 ~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~ 98 (286)
+.++.++.|.+|+.+ |--.-.-|||+++.++.++..+..||..=.
T Consensus 8 ~~~~~~~~i~~al~~-G~tlk~l~gis~~~le~iY~~Ay~~y~~Gk 52 (165)
T PRK15331 8 SEERVAEMIWDAVSE-GATLKDVHGIPQDMMDGLYAHAYEFYNQGR 52 (165)
T ss_pred hHHHHHHHHHHHHHC-CCCHHHHhCCCHHHHHHHHHHHHHHHHCCC
Confidence 346778888888887 544444689999999999999999997543
Done!