Query 042088
Match_columns 286
No_of_seqs 191 out of 1177
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:07:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 7.6E-70 2.6E-74 510.5 21.0 275 3-277 2-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 1.1E-64 3.7E-69 469.0 19.7 239 39-277 2-299 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.2E-64 7.5E-69 465.8 20.0 234 37-271 3-309 (312)
4 1odm_A Isopenicillin N synthas 100.0 5.5E-60 1.9E-64 439.7 20.1 231 37-272 5-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.5E-59 5E-64 433.4 11.8 225 39-273 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 7.6E-57 2.6E-61 409.6 21.9 216 39-271 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 86.6 1.6 5.6E-05 37.9 7.1 78 141-236 100-194 (243)
8 2hbt_A EGL nine homolog 1; pro 84.6 2.2 7.6E-05 37.0 7.0 165 56-237 14-213 (247)
9 2rg4_A Uncharacterized protein 84.0 4.3 0.00015 34.4 8.4 43 185-239 166-209 (216)
10 3s57_A Alpha-ketoglutarate-dep 82.1 5.9 0.0002 33.2 8.4 85 136-234 96-200 (204)
11 2iuw_A Alkylated repair protei 81.1 6.8 0.00023 33.6 8.7 88 136-235 122-228 (238)
12 3tht_A Alkylated DNA repair pr 72.6 7.1 0.00024 35.6 6.6 93 140-239 198-315 (345)
13 3i3q_A Alpha-ketoglutarate-dep 63.9 12 0.00043 31.5 5.9 80 140-235 105-201 (211)
14 4ay7_A Methylcobalamin\: coenz 59.0 19 0.00066 32.2 6.7 45 51-95 300-348 (348)
15 2dbn_A Hypothetical protein YB 57.5 4.1 0.00014 38.6 1.9 53 38-94 98-150 (461)
16 3o2g_A Gamma-butyrobetaine dio 53.2 7 0.00024 36.0 2.7 50 40-94 122-171 (388)
17 2jig_A Prolyl-4 hydroxylase; h 52.5 17 0.00058 30.4 4.8 48 187-238 170-218 (224)
18 3itq_A Prolyl 4-hydroxylase, a 51.4 18 0.00062 30.5 4.9 86 141-237 112-212 (216)
19 2opi_A L-fuculose-1-phosphate 50.0 8.2 0.00028 32.3 2.4 36 40-78 125-160 (212)
20 1otj_A Alpha-ketoglutarate-dep 45.6 17 0.00059 31.4 3.9 50 38-93 15-64 (283)
21 1e4c_P L-fuculose 1-phosphate 43.6 12 0.00039 31.4 2.3 36 40-78 122-157 (215)
22 2fk5_A Fuculose-1-phosphate al 41.6 14 0.00049 30.6 2.6 36 40-78 117-153 (200)
23 2irp_A Putative aldolase class 40.2 14 0.00049 30.6 2.4 36 39-78 138-176 (208)
24 1oih_A Putative alkylsulfatase 38.9 26 0.00088 30.6 4.0 50 38-93 25-75 (301)
25 1pvt_A Sugar-phosphate aldolas 37.9 17 0.0006 30.8 2.6 37 39-78 160-196 (238)
26 2a1x_A Phytanoyl-COA dioxygena 37.3 49 0.0017 28.7 5.6 36 60-96 26-61 (308)
27 3r1j_A Alpha-ketoglutarate-dep 35.0 35 0.0012 30.1 4.3 50 38-93 19-69 (301)
28 2v9l_A Rhamnulose-1-phosphate 32.9 18 0.00063 31.5 2.0 36 40-78 179-214 (274)
29 3pvj_A Alpha-ketoglutarate-dep 32.4 31 0.0011 29.9 3.4 50 38-93 13-62 (277)
30 3rcq_A Aspartyl/asparaginyl be 30.2 69 0.0024 26.6 5.0 43 197-239 139-186 (197)
31 1m5a_B Insulin B chain; alpha 30.1 53 0.0018 18.8 2.9 19 55-73 9-27 (30)
32 3ocr_A Class II aldolase/adduc 26.4 35 0.0012 29.7 2.6 37 40-78 156-192 (273)
33 1e5r_A Proline oxidase; oxidor 22.9 70 0.0024 28.3 3.9 21 215-235 155-175 (290)
34 2j01_J 50S ribosomal protein L 22.1 1.7E+02 0.0058 23.3 5.9 39 54-92 6-46 (173)
35 1zav_A 50S ribosomal protein L 21.9 1.7E+02 0.0058 23.5 5.9 40 54-93 8-48 (180)
36 1nx8_A CARC, carbapenem syntha 20.6 29 0.001 29.6 0.9 45 39-93 17-61 (273)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=7.6e-70 Score=510.53 Aligned_cols=275 Identities=31% Similarity=0.545 Sum_probs=240.1
Q ss_pred CCchhHHHHhc-cCCCCCCcccCCCCCCCCCCC---CC---CCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEE
Q 042088 3 FPNSLVFNVAS-SVSSIPSNYIRPASNRPNLDG---VY---LDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFR 72 (286)
Q Consensus 3 ~~~~~v~~~~~-~~~~ip~~~~~p~~~~~~~~~---~~---~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~ 72 (286)
.|+++|++|++ ++.+||++|++|.++++.... .. ...+||||||+.|.++ ++.+++++|.+||++|||||
T Consensus 2 ~~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~ 81 (356)
T 1gp6_A 2 VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH 81 (356)
T ss_dssp CCCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CCcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence 47889999999 899999999999877765321 00 1347999999998754 35678999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc-----------cCCC----------------------c-cccCcCCCC
Q 042088 73 TENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH-----------CYPL----------------------E-DYMHEWATN 118 (286)
Q Consensus 73 l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~-----------~~p~----------------------~-~~~~~WP~~ 118 (286)
|+||||+.++++++++.+++||+||.|.|... |.+. . ..+|.||+.
T Consensus 82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 (356)
T ss_dssp EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence 99999999999999999999999999655321 1110 0 015789998
Q ss_pred Cccc------------------------cCCCCCChhHHhhc---CCCccceeeccCCCCCCCcccCcccccCCCcEEEE
Q 042088 119 PQSF------------------------SLGLERDYPIKALG---NHGQHMAINYCPLCPQPELTYGLPCQTDPNVITIL 171 (286)
Q Consensus 119 ~~~f------------------------~Lgl~~~~~~~~~~---~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL 171 (286)
+++| +||+++++|.+.+. .+.+.||++|||||++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 8887 89999999999887 46788999999999998889999999999999999
Q ss_pred ecCCCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCC-eEecCCccc
Q 042088 172 LQDDVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDA-MIGPAPHLI 250 (286)
Q Consensus 172 ~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~~~ 250 (286)
+||+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.+++.+|||++||++|+.|+ +|+|+++++
T Consensus 242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~ 321 (356)
T 1gp6_A 242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV 321 (356)
T ss_dssp EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence 9999999999999999999999999999999999999999999999999998889999999999999999 999999999
Q ss_pred ccC---CCCCccHHHHHHHHHhccCCCchh
Q 042088 251 NDM---LILPTTGTLHIASTTRNSGTGDLQ 277 (286)
Q Consensus 251 ~~~---~~~~~t~~e~~~~~~~~~~~~~~~ 277 (286)
+++ +|+++|++||+..++.+..+|+.+
T Consensus 322 ~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 322 SVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp CSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 865 689999999999999888766554
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.1e-64 Score=469.02 Aligned_cols=239 Identities=31% Similarity=0.524 Sum_probs=211.6
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhh------ccCCC----
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRL------HCYPL---- 108 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~------~~~p~---- 108 (286)
.+||||||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|.|.. +|.+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e~ 81 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV 81 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCcccccC
Confidence 46999999998644678899999999999999999999999999999999999999999966542 12110
Q ss_pred -----c----------cccCcCCCCCccc------------------------cCCCCCChhHHhhcC---CCccceeec
Q 042088 109 -----E----------DYMHEWATNPQSF------------------------SLGLERDYPIKALGN---HGQHMAINY 146 (286)
Q Consensus 109 -----~----------~~~~~WP~~~~~f------------------------~Lgl~~~~~~~~~~~---~~~~lrl~~ 146 (286)
. ...|.||+.+++| +||+++++|.+.+.. ..+.+|+||
T Consensus 82 ~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 161 (319)
T 1w9y_A 82 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN 161 (319)
T ss_dssp GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred CCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEe
Confidence 0 0157899887777 899999999998863 456899999
Q ss_pred cCCCCCCCcccCcccccCCCcEEEEecC-CCCCeEEEECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCC
Q 042088 147 CPLCPQPELTYGLPCQTDPNVITILLQD-DVPGLQVLINGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCN 225 (286)
Q Consensus 147 Ypp~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~ 225 (286)
||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.+++
T Consensus 162 YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~ 241 (319)
T 1w9y_A 162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 241 (319)
T ss_dssp CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS
T ss_pred cCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCC
Confidence 9999998888999999999999999995 799999999999999999999999999999999999999999999999988
Q ss_pred CceeeeEEeecCCCCCeEecCCcccccC------CCCCccHHHHHHHHHhccCCCchh
Q 042088 226 KERISIPTIYCPSPDAMIGPAPHLINDM------LILPTTGTLHIASTTRNSGTGDLQ 277 (286)
Q Consensus 226 ~~R~Si~~F~~P~~d~~i~pl~~~~~~~------~~~~~t~~e~~~~~~~~~~~~~~~ 277 (286)
.+|||++||++|+.|++|+|++++++++ +|+++|++||+..++.+.+.++..
T Consensus 242 ~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~ 299 (319)
T 1w9y_A 242 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEP 299 (319)
T ss_dssp SCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHH
T ss_pred CCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchh
Confidence 8999999999999999999999998743 689999999999999888877754
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.2e-64 Score=465.75 Aligned_cols=234 Identities=21% Similarity=0.330 Sum_probs=206.0
Q ss_pred CCCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhhhc---------cCC
Q 042088 37 LDDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVRLH---------CYP 107 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~~~---------~~p 107 (286)
++.+||||||+.+.+ ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|.|... |.+
T Consensus 3 ~~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~ 81 (312)
T 3oox_A 3 STSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIP 81 (312)
T ss_dssp -CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEEC
T ss_pred CCCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccc
Confidence 456899999998754 5788999999999999999999999999999999999999999999654321 110
Q ss_pred -------------------------Ccc-----c-cCcCCCCCccc------------------------cCCCCCChhH
Q 042088 108 -------------------------LED-----Y-MHEWATNPQSF------------------------SLGLERDYPI 132 (286)
Q Consensus 108 -------------------------~~~-----~-~~~WP~~~~~f------------------------~Lgl~~~~~~ 132 (286)
... . +|.||+.+++| +||+++++|.
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 161 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK 161 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTH
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 000 1 47899888887 8999999999
Q ss_pred HhhcCCCccceeeccCCCCCCCcccCcccccCCCcEEEEecCCCCCeEEE-ECCeEEEEeecCCeEEEEechhHHHhhCC
Q 042088 133 KALGNHGQHMAINYCPLCPQPELTYGLPCQTDPNVITILLQDDVPGLQVL-INGRWVAVNPISRTFTVNIGGQIQVLSND 211 (286)
Q Consensus 133 ~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L~~~TnG 211 (286)
+.+..+.+.+|++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+||||
T Consensus 162 ~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG 241 (312)
T 3oox_A 162 PTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNN 241 (312)
T ss_dssp HHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTT
T ss_pred HHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCC
Confidence 99988888999999999988655599999999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccceEeeCC----CCceeeeEEeecCCCCCeEecCCcccccC---CCC-CccHHHHHHHHHhcc
Q 042088 212 RYKSVLHRAIVNC----NKERISIPTIYCPSPDAMIGPAPHLINDM---LIL-PTTGTLHIASTTRNS 271 (286)
Q Consensus 212 ~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~~-~~t~~e~~~~~~~~~ 271 (286)
+|||++|||+.++ +.+|||++||++|+.|++|+|++++++++ +|+ ++|++||+.+|+++.
T Consensus 242 ~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 242 VLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp SSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred eecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999998764 46799999999999999999999999876 688 999999999998754
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=5.5e-60 Score=439.65 Aligned_cols=231 Identities=21% Similarity=0.284 Sum_probs=203.5
Q ss_pred CCCCCceEeCCCCCCC---ChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHH-hcCChhhhhhc----cCC-
Q 042088 37 LDDCIPQIDLRYLNGS---NRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQF-FHFPEDYVRLH----CYP- 107 (286)
Q Consensus 37 ~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f-F~Lp~e~~~~~----~~p- 107 (286)
+..+||||||+.|.++ ++.+++++|.+||++||||||+|||| +++++++.+++| |+||.|.|... |.+
T Consensus 5 ~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~~Gy~~~ 81 (331)
T 1odm_A 5 SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAIRAYNKE 81 (331)
T ss_dssp CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBCTTTCTT
T ss_pred cCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhhcCCCcC
Confidence 3467999999998654 45678999999999999999999999 999999999999 99999655321 110
Q ss_pred ---------------C-c------------------------cccCcCCCC--Cccc-----------------------
Q 042088 108 ---------------L-E------------------------DYMHEWATN--PQSF----------------------- 122 (286)
Q Consensus 108 ---------------~-~------------------------~~~~~WP~~--~~~f----------------------- 122 (286)
. + ..+|.||+. +++|
T Consensus 82 ~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la 161 (331)
T 1odm_A 82 HQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYA 161 (331)
T ss_dssp CTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 015789987 7777
Q ss_pred -cCCCCCChhHHhhcCCCccce--eeccC------C---CCCCCc-ccCcccccCCCcEEEEecCCCCCeEEE-ECCeEE
Q 042088 123 -SLGLERDYPIKALGNHGQHMA--INYCP------L---CPQPEL-TYGLPCQTDPNVITILLQDDVPGLQVL-INGRWV 188 (286)
Q Consensus 123 -~Lgl~~~~~~~~~~~~~~~lr--l~~Yp------p---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~ 188 (286)
+||+++++|.+.+..+.+.+| ++||| | |++++. .+|+++|||+|+||||+||+++||||+ ++| |+
T Consensus 162 ~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~g-Wi 240 (331)
T 1odm_A 162 LALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAG-YQ 240 (331)
T ss_dssp HHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETTE-EE
T ss_pred HHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCCC-eE
Confidence 899999999999988888999 99999 7 777776 899999999999999999999999999 788 99
Q ss_pred EEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecCCCCCeEecCCcccccC--CCCCccHHHHHHH
Q 042088 189 AVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCPSPDAMIGPAPHLINDM--LILPTTGTLHIAS 266 (286)
Q Consensus 189 ~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~--~~~~~t~~e~~~~ 266 (286)
+|+|.||++|||+||+||+||||+|||+.|||+.+ +.+|||++||++|+.|++|+|++++++++ +|+++|++||++.
T Consensus 241 ~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~~~y~~~t~~e~l~~ 319 (331)
T 1odm_A 241 DIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGKSDREPLSYGDYLQN 319 (331)
T ss_dssp ECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCCCSSCCCBHHHHHHH
T ss_pred ECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccccCCCCccHHHHHHH
Confidence 99999999999999999999999999999999864 78999999999999999999999998764 6899999999999
Q ss_pred HHhccC
Q 042088 267 TTRNSG 272 (286)
Q Consensus 267 ~~~~~~ 272 (286)
|+.+.+
T Consensus 320 ~~~~~~ 325 (331)
T 1odm_A 320 GLVSLI 325 (331)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987653
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.5e-59 Score=433.36 Aligned_cols=225 Identities=16% Similarity=0.180 Sum_probs=189.0
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCC-hhhhhhc----------cCC
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFP-EDYVRLH----------CYP 107 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp-~e~~~~~----------~~p 107 (286)
.+||||||+.+.+++.. ++|.+||++||||||+||||+.++++++++.+++||+|| .|.|... |.+
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 47999999987553222 399999999999999999999999999999999999999 8655422 111
Q ss_pred C-----------------cc------ccCcCCCCCccc------------------------cCCC----CCChhHHhhc
Q 042088 108 L-----------------ED------YMHEWATNPQSF------------------------SLGL----ERDYPIKALG 136 (286)
Q Consensus 108 ~-----------------~~------~~~~WP~~~~~f------------------------~Lgl----~~~~~~~~~~ 136 (286)
. .+ .+|.|| +++| +||+ ++++|.+.
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~-- 155 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTADNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC-- 155 (311)
T ss_dssp C-----------------CEEEEECSSSCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC--
T ss_pred ccccccccccCCCCCCCcceeeeccCCCCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc--
Confidence 0 00 057899 6676 8999 66677654
Q ss_pred CCCccceeeccCCCCCCC--c--ccCcccccCCCcEEEEecC-CCCC---eEEEECCeEEEEeecCCeEEEEechhHHHh
Q 042088 137 NHGQHMAINYCPLCPQPE--L--TYGLPCQTDPNVITILLQD-DVPG---LQVLINGRWVAVNPISRTFTVNIGGQIQVL 208 (286)
Q Consensus 137 ~~~~~lrl~~Ypp~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---LqV~~~g~W~~V~p~pg~~vVnvGd~L~~~ 208 (286)
.+.+|++|||||++++ + .+|+++|||+|+||||+|| +++| |||+.+|+|++|+|.||++|||+||+||+|
T Consensus 156 --~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~ 233 (311)
T 1dcs_A 156 --EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLV 233 (311)
T ss_dssp --CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred --chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHH
Confidence 6789999999998763 3 6889999999999999999 8999 999999999999999999999999999999
Q ss_pred hCCccccccceEeeCC-----CCceeeeEEeecCCCCCeEecCCcccccC---CC--CCccHHHHHHHHHhccCC
Q 042088 209 SNDRYKSVLHRAIVNC-----NKERISIPTIYCPSPDAMIGPAPHLINDM---LI--LPTTGTLHIASTTRNSGT 273 (286)
Q Consensus 209 TnG~~ks~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~~--~~~t~~e~~~~~~~~~~~ 273 (286)
|||+|||+.|||+.++ +.+|||++||++|+.|++|+ ++++++++ +| +++|++||+..++.+++.
T Consensus 234 TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 234 TGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp TTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred hCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHhc
Confidence 9999999999999987 68999999999999999999 99988754 68 899999999999887765
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.6e-57 Score=409.56 Aligned_cols=216 Identities=25% Similarity=0.340 Sum_probs=178.9
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCChhhhh-------hccCCCc--
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPEDYVR-------LHCYPLE-- 109 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~e~~~-------~~~~p~~-- 109 (286)
++||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||+|+...+. .+|.+..
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~le~K~k~~~~~~~~~GY~~~~~~ 75 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSEAKNEFMFNRETHDGFFPASIS 75 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTSGGGGGGBCCTTTCCEEECCC--
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhhHHHHHhccCCCCCCccccCccc
Confidence 47999999973 35799999999999999999999999999999999999998442211 1122211
Q ss_pred ------------cc--cCcCCCCCccc------------------------cCCCC--CCh---hHHhhcCCC-ccceee
Q 042088 110 ------------DY--MHEWATNPQSF------------------------SLGLE--RDY---PIKALGNHG-QHMAIN 145 (286)
Q Consensus 110 ------------~~--~~~WP~~~~~f------------------------~Lgl~--~~~---~~~~~~~~~-~~lrl~ 145 (286)
+. ...||..+++| +||++ +++ |.+.+..+. +.+|++
T Consensus 76 e~~~~~~~~D~kE~~~~~p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~ 155 (280)
T 3on7_A 76 ETAKGHTVKDIKEYYHVYPWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRIL 155 (280)
T ss_dssp ------CCCCSCEEEEECTTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEE
T ss_pred cccCCCCcccHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEE
Confidence 00 12366666777 66654 233 566665554 889999
Q ss_pred ccCCCCCCC--cccCcccccCCCcEEEEecCCCCCeEEE-ECCeEEEEeecCCeEEEEechhHHHhhCCccccccceEee
Q 042088 146 YCPLCPQPE--LTYGLPCQTDPNVITILLQDDVPGLQVL-INGRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIV 222 (286)
Q Consensus 146 ~Ypp~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~ 222 (286)
|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+||||+|||+.|||+.
T Consensus 156 ~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~ 235 (280)
T 3on7_A 156 HYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVIN 235 (280)
T ss_dssp EECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEEC
T ss_pred ECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeC
Confidence 999998764 4799999999999999999999999999 7999999999999999999999999999999999999998
Q ss_pred CC----CCceeeeEEeecCCCCCeEecCCcccccCCCCCccHHHHHHHHHhcc
Q 042088 223 NC----NKERISIPTIYCPSPDAMIGPAPHLINDMLILPTTGTLHIASTTRNS 271 (286)
Q Consensus 223 ~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~~~~~t~~e~~~~~~~~~ 271 (286)
++ ..+|||++||++|+.|++|+| ++|++||+++|+.+.
T Consensus 236 ~~~~~~~~~R~Si~~F~~P~~d~~i~p-----------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 236 PEGTDKTKSRISLPLFLHPHPSVVLSE-----------RYTADSYLMERLREL 277 (280)
T ss_dssp CTTCCTTSCEEECCEEECCCTTCBCSS-----------SCBHHHHHHHHHHHT
T ss_pred CCCCCCCCCeEEEEEEEcCCCCCEECC-----------CccHHHHHHHHHHHh
Confidence 74 468999999999999999974 589999999999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=86.55 E-value=1.6 Score=37.86 Aligned_cols=78 Identities=13% Similarity=0.014 Sum_probs=50.5
Q ss_pred cceeeccCCCCCCCcccCcccccCCC-----------cEEEEec--C--C-CCC-eEEEECCeEEEEeecCCeEEEEech
Q 042088 141 HMAINYCPLCPQPELTYGLPCQTDPN-----------VITILLQ--D--D-VPG-LQVLINGRWVAVNPISRTFTVNIGG 203 (286)
Q Consensus 141 ~lrl~~Ypp~~~~~~~~g~~~HtD~~-----------~lTlL~q--d--~-~~G-LqV~~~g~W~~V~p~pg~~vVnvGd 203 (286)
-+++++|.+.. -..+|.|.. .+|+++. + . .|| |.+.....=..|+|..|.+|+.-.
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 37788886532 245666652 4555443 3 1 233 555544334689999999998743
Q ss_pred hHHHhhCCccccccceEeeCCCCceeeeEEeec
Q 042088 204 QIQVLSNDRYKSVLHRAIVNCNKERISIPTIYC 236 (286)
Q Consensus 204 ~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 236 (286)
.++|+|.......|+++..+++
T Consensus 173 -----------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 -----------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp -----------TSEEEECCEEEECEEEEEEEEE
T ss_pred -----------CCeEcCccccccCEEEEEEehh
Confidence 3689997654568999998887
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=84.61 E-value=2.2 Score=36.95 Aligned_cols=165 Identities=13% Similarity=0.151 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcCCh-hhhhhccC---CCcc-c--cCcCCCCCcc-c-cCC-
Q 042088 56 DVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHFPE-DYVRLHCY---PLED-Y--MHEWATNPQS-F-SLG- 125 (286)
Q Consensus 56 ~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~Lp~-e~~~~~~~---p~~~-~--~~~WP~~~~~-f-~Lg- 125 (286)
.....+.+++...|++++.| -++++.++.+.+.++.+-+-.. .--..... .... + .-.|-+.... . .+.
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~-fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~ 92 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDD-FLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGL 92 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESS-SSCHHHHHHHHHHHHHHHHTTCSCSCCEEECCSSSTTCEECCEEEEECSCSTTCHHHHH
T ss_pred hhHHHHHHHhccCCEEEECC-CCCHHHHHHHHHHHHhhhhcCCccccccccccccccccccccceeeecccccchhHHHH
Confidence 34467889999999877554 4999999999998887431110 00000000 0000 0 1123221000 0 000
Q ss_pred CC--CChhHHhhcC--C------CccceeeccCCCCCCCcccCcccccCC-----CcEEEEec-CC------CCC-eEEE
Q 042088 126 LE--RDYPIKALGN--H------GQHMAINYCPLCPQPELTYGLPCQTDP-----NVITILLQ-DD------VPG-LQVL 182 (286)
Q Consensus 126 l~--~~~~~~~~~~--~------~~~lrl~~Ypp~~~~~~~~g~~~HtD~-----~~lTlL~q-d~------~~G-LqV~ 182 (286)
+- -+.+...+.. + ..-+.+.+|++. .-....|.|. -.+|+++. +. .|| |.++
T Consensus 93 l~~~i~~l~~~ln~~lGl~~i~~~~e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~ 167 (247)
T 2hbt_A 93 LMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIF 167 (247)
T ss_dssp HHHHHHHHHHHTTTTSTTCCEEEECCEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEEC
T ss_pred HHHHHHHHHHHHhhhcCcccccccceEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEe
Confidence 00 0000111111 0 123567888751 1235567776 26777764 11 144 6777
Q ss_pred ECC--eEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCCCCceeeeEEeecC
Q 042088 183 ING--RWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIYCP 237 (286)
Q Consensus 183 ~~g--~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P 237 (286)
.++ ....|.|..|.+|+.-.+. -.+|.|.. ....|+||+..+.-
T Consensus 168 ~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 168 PEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp CTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred cCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-CCCEEEEEEEEEcC
Confidence 544 5789999999999886431 16899965 45789999886653
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=83.98 E-value=4.3 Score=34.37 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=33.4
Q ss_pred CeEEEEeecCCeEEEEechhHHHhhCCccccccceEeeCC-CCceeeeEEeecCCC
Q 042088 185 GRWVAVNPISRTFTVNIGGQIQVLSNDRYKSVLHRAIVNC-NKERISIPTIYCPSP 239 (286)
Q Consensus 185 g~W~~V~p~pg~~vVnvGd~L~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F~~P~~ 239 (286)
..+..|.|.+|.+||.-.. -.|+|..+. +.+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999988664 479998754 468999999988764
No 10
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=82.10 E-value=5.9 Score=33.22 Aligned_cols=85 Identities=9% Similarity=-0.044 Sum_probs=52.4
Q ss_pred cCCCccceeeccCCCCCCCcccCcccccCCC--------cEEEEecCCCCCeEEEE----------CCeEEEEeecCCeE
Q 042088 136 GNHGQHMAINYCPLCPQPELTYGLPCQTDPN--------VITILLQDDVPGLQVLI----------NGRWVAVNPISRTF 197 (286)
Q Consensus 136 ~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~----------~g~W~~V~p~pg~~ 197 (286)
+.....+-+|+|.+.. -++++|.|-. +.++-+. ...=+.+.+ .+..+.+...+|++
T Consensus 96 g~~~n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~Gsl 169 (204)
T 3s57_A 96 GQTFNFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSL 169 (204)
T ss_dssp CCCCSEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEE
T ss_pred CCCCceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCE
Confidence 3334456689997643 3688888862 2233222 111233332 12578899999999
Q ss_pred EEEechhHHHhhCCccccccceEeeCC--CCceeeeEEe
Q 042088 198 TVNIGGQIQVLSNDRYKSVLHRAIVNC--NKERISIPTI 234 (286)
Q Consensus 198 vVnvGd~L~~~TnG~~ks~~HRV~~~~--~~~R~Si~~F 234 (286)
+|.-|++=..|. |.|.... ...|+|+.|=
T Consensus 170 lvM~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 170 LMMNHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp EEEETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred EEECchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 999999877784 5553322 3679999873
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=81.12 E-value=6.8 Score=33.63 Aligned_cols=88 Identities=9% Similarity=0.025 Sum_probs=54.1
Q ss_pred cCCCccceeeccCCCCCCCcccCcccccCC--------CcEEEEecCCCCCeEEEE-C----------CeEEEEeecCCe
Q 042088 136 GNHGQHMAINYCPLCPQPELTYGLPCQTDP--------NVITILLQDDVPGLQVLI-N----------GRWVAVNPISRT 196 (286)
Q Consensus 136 ~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~--------~~lTlL~qd~~~GLqV~~-~----------g~W~~V~p~pg~ 196 (286)
......+-+|+|++.. -++++|.|- .+.||-+.. ..=+.+.. . +..+.+.-.+|.
T Consensus 122 g~~~n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gs 195 (238)
T 2iuw_A 122 GHTFNSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGT 195 (238)
T ss_dssp SCCCCEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTC
T ss_pred CCCCCEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCC
Confidence 3334456789997542 368888884 233332221 11233332 1 368899999999
Q ss_pred EEEEechhHHHhhCCccccccceEeeCCCCceeeeEEee
Q 042088 197 FTVNIGGQIQVLSNDRYKSVLHRAIVNCNKERISIPTIY 235 (286)
Q Consensus 197 ~vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~ 235 (286)
++|.-|++=..|..|.-+.. .....|+|+.|=.
T Consensus 196 llvM~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 196 LLIMEGATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp EEEEEETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred EEEEChhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 99999998777755443321 1246899998744
No 12
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=72.64 E-value=7.1 Score=35.60 Aligned_cols=93 Identities=16% Similarity=0.135 Sum_probs=59.5
Q ss_pred ccceeeccCCCCCCCcccCcccccCCC------cEEEEecCCCCCeEEE-ECCeEEEEeecCCeEEEEechhHHHhhCCc
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDPN------VITILLQDDVPGLQVL-INGRWVAVNPISRTFTVNIGGQIQVLSNDR 212 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~~vVnvGd~L~~~TnG~ 212 (286)
..+-+|+|.+. -++++|.|-. +.|+=+- ...=+.+. ++|.++.+.-.+|+++|.-|+.-..|..|.
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 45668889752 2789999884 3333222 11224444 357789999999999999999999997765
Q ss_pred cccccceEe------------------eCCCCceeeeEEeecCCC
Q 042088 213 YKSVLHRAI------------------VNCNKERISIPTIYCPSP 239 (286)
Q Consensus 213 ~ks~~HRV~------------------~~~~~~R~Si~~F~~P~~ 239 (286)
-+-...-+- ..+...|+|+.|=.-+..
T Consensus 271 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 271 TCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 553332221 011346999998765544
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=63.92 E-value=12 Score=31.45 Aligned_cols=80 Identities=14% Similarity=-0.023 Sum_probs=49.3
Q ss_pred ccceeeccCCCCCCCcccCcccccCC-----C--cEEEEecCCCCCeEEEE---CCeEEEEeecCCeEEEEechhHHHhh
Q 042088 140 QHMAINYCPLCPQPELTYGLPCQTDP-----N--VITILLQDDVPGLQVLI---NGRWVAVNPISRTFTVNIGGQIQVLS 209 (286)
Q Consensus 140 ~~lrl~~Ypp~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqV~~---~g~W~~V~p~pg~~vVnvGd~L~~~T 209 (286)
..+-+|+|.+. . ++++|.|- + ++++-+.. ..=+.+.+ .+....+.-.+|+++|.-|+.- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~- 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF- 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC-
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce-
Confidence 44668999752 3 78999992 2 22332221 11233332 3568889999999999988852 22
Q ss_pred CCccccccceEeeCCC-------CceeeeEEee
Q 042088 210 NDRYKSVLHRAIVNCN-------KERISIPTIY 235 (286)
Q Consensus 210 nG~~ks~~HRV~~~~~-------~~R~Si~~F~ 235 (286)
.|.|..... ..|+|+.|=.
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 477754322 3599998753
No 14
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=59.02 E-value=19 Score=32.24 Aligned_cols=45 Identities=11% Similarity=0.111 Sum_probs=37.2
Q ss_pred CCChhHHHHHHHHHHhhcCeEEEEeCCCC----HHHHHHHHHHHHHHhc
Q 042088 51 GSNRSDVVKQTGQACQDYGFFRTENNGIP----EEVMDKMLCLSRQFFH 95 (286)
Q Consensus 51 ~~~~~~~~~~l~~A~~~~Gff~l~nhGi~----~~~~~~~~~~~~~fF~ 95 (286)
.+..+++.+++.+.++.-||+.-.+|||+ .+-++.+.+++++|++
T Consensus 300 ~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 300 PGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 33567777888888999999888899975 5789999999999985
No 15
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=57.52 E-value=4.1 Score=38.59 Aligned_cols=53 Identities=11% Similarity=0.134 Sum_probs=39.7
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHh
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFF 94 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 94 (286)
+.-||.||++++.++ .+.++..+.+++.||+.|.|. ||.+...+..+...+|.
T Consensus 98 ~~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl 150 (461)
T 2dbn_A 98 DAVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYL 150 (461)
T ss_dssp CCSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHH
Confidence 457999999987432 233556678899999988877 89888777777776665
No 16
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=53.20 E-value=7 Score=36.01 Aligned_cols=50 Identities=10% Similarity=0.084 Sum_probs=39.2
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHh
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFF 94 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 94 (286)
++|.||++.+.+ .++..+++.+|+.++|++.+.|-.++.+... +.++.|=
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~---~~a~~~G 171 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPGEVS---KLGKRMG 171 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTTHHH---HHHHHHS
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHHHHH---HHHHHhC
Confidence 689999987653 3577899999999999999999988865443 4466664
No 17
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=52.51 E-value=17 Score=30.43 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=33.5
Q ss_pred EEEEeecCCeEEEEechhHHHhhCCcc-ccccceEeeCCCCceeeeEEeecCC
Q 042088 187 WVAVNPISRTFTVNIGGQIQVLSNDRY-KSVLHRAIVNCNKERISIPTIYCPS 238 (286)
Q Consensus 187 W~~V~p~pg~~vVnvGd~L~~~TnG~~-ks~~HRV~~~~~~~R~Si~~F~~P~ 238 (286)
-+.|.|..|.+|+.-- ...||.. ..++|+|.......||++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 4789999999887643 1123433 5789999665446899999888643
No 18
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=51.45 E-value=18 Score=30.50 Aligned_cols=86 Identities=13% Similarity=0.006 Sum_probs=51.5
Q ss_pred cceeeccCCCCCCCcccCcccccCCC-----------cEEEEec--C-CCCCeEEEECCeEEEEeecCCeEEEEechhHH
Q 042088 141 HMAINYCPLCPQPELTYGLPCQTDPN-----------VITILLQ--D-DVPGLQVLINGRWVAVNPISRTFTVNIGGQIQ 206 (286)
Q Consensus 141 ~lrl~~Ypp~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~L~ 206 (286)
.+++++|.+... ..+|.|.. .+|+++. | ..||=-+..+. =+.|.|..|.+|+.-.-
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~~--- 181 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEYF--- 181 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEECC---
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEecc---
Confidence 477888865322 45666653 4777664 2 23443334332 26889999998876531
Q ss_pred HhhCCc-cccccceEeeCCCCceeeeEEeecC
Q 042088 207 VLSNDR-YKSVLHRAIVNCNKERISIPTIYCP 237 (286)
Q Consensus 207 ~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~P 237 (286)
..||. -..++|++.......|+++..+++-
T Consensus 182 -~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 182 -YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp -CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred -CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 11222 1457999875444579999888763
No 19
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=49.96 E-value=8.2 Score=32.30 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=30.0
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++++... ...++++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP---GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998754 34678899999999888899999996
No 20
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=45.59 E-value=17 Score=31.35 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=37.1
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHH
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQF 93 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f 93 (286)
.++|+-|||+...+ .+..++|.+++.++|++.+.+-.++.+...+ .++.|
T Consensus 15 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~~---~~~~~ 64 (283)
T 1otj_A 15 GAQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQQRA---LAQRF 64 (283)
T ss_dssp CEEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHHHHH---HHHTT
T ss_pred eEEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHHHH---HHHHh
Confidence 34678889987432 4678999999999999999998887654433 34444
No 21
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=43.59 E-value=12 Score=31.45 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=29.8
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++++... ...++++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF---GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998754 34578889999998888889999996
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=41.55 E-value=14 Score=30.61 Aligned_cols=36 Identities=8% Similarity=0.084 Sum_probs=29.6
Q ss_pred CCceE-eCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQI-DLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++ ++... ...++++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS---ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS---SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC---CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 79999 77654 34688899999999888999999995
No 23
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=40.18 E-value=14 Score=30.61 Aligned_cols=36 Identities=17% Similarity=0.093 Sum_probs=28.7
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcC---eEEEEeCCC
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYG---FFRTENNGI 78 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---ff~l~nhGi 78 (286)
..||+++... +.+++++.+.+++.+.+ .+.+.|||+
T Consensus 138 ~~vp~~~~~~----g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNEQ----NIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCCS----CHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCCC----CHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 4699988742 46788899999998875 788999996
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.87 E-value=26 Score=30.59 Aligned_cols=50 Identities=8% Similarity=-0.007 Sum_probs=36.8
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCC-CCHHHHHHHHHHHHHH
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNG-IPEEVMDKMLCLSRQF 93 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhG-i~~~~~~~~~~~~~~f 93 (286)
.++|+-|||+...+ .+..++|.+++.++|++.+.|-. ++.+ +..+.++.|
T Consensus 25 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~~---~~~~~~~~f 75 (301)
T 1oih_A 25 GAEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDDQ---SQEGFAKLL 75 (301)
T ss_dssp CEEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHTT
T ss_pred ceEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHHh
Confidence 34577788887432 46789999999999999999987 8853 344445555
No 25
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=37.94 E-value=17 Score=30.82 Aligned_cols=37 Identities=8% Similarity=0.113 Sum_probs=30.2
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
..||++++... ...++++.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKP---GSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCST---TCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 36999998653 34678889999999888899999996
No 26
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=37.28 E-value=49 Score=28.70 Aligned_cols=36 Identities=11% Similarity=0.237 Sum_probs=30.0
Q ss_pred HHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHHhcC
Q 042088 60 QTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQFFHF 96 (286)
Q Consensus 60 ~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~L 96 (286)
+..+.+.+.||+.|.|- ++.+.++++.+...++++.
T Consensus 26 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 61 (308)
T 2a1x_A 26 EQRKFYEENGFLVIKNL-VPDADIQRFRNEFEKICRK 61 (308)
T ss_dssp THHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCEEEccCC-CCHHHHHHHHHHHHHHHhc
Confidence 34578899999999875 8899999999999888754
No 27
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=34.99 E-value=35 Score=30.06 Aligned_cols=50 Identities=12% Similarity=0.034 Sum_probs=37.6
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHHHHH
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENN-GIPEEVMDKMLCLSRQF 93 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~f 93 (286)
.++|+=|||+... ..+..++|.+|+.++|.+.+.|- .++.+.. .+.++.|
T Consensus 19 Gaei~gvdl~~~L---~d~~~~~l~~al~~~gvv~fR~q~~l~~~~~---~~fa~~f 69 (301)
T 3r1j_A 19 GARVDGVRLGGDL---DDATVEQIRRALLTHKVIFFRHQHHLDDSRQ---LEFARLL 69 (301)
T ss_dssp CEEEESCCCSTTC---CHHHHHHHHHHHHHHSEEEECCCTTCCHHHH---HHHHHHH
T ss_pred cceEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCCHHHH---HHHHHhc
Confidence 3568888998432 25778999999999999999998 7886533 4456665
No 28
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=32.93 E-value=18 Score=31.50 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=29.9
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++++... ...++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP---GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS---SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC---CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 6999988643 34688899999999988999999996
No 29
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=32.39 E-value=31 Score=29.90 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=37.5
Q ss_pred CCCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHH
Q 042088 38 DDCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQF 93 (286)
Q Consensus 38 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f 93 (286)
.++|.=|||+...+ .+..++|.+|+.++|.+.+.|-.++.+.. .+.++.|
T Consensus 13 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~gvv~fR~q~l~~~~~---~~fa~~f 62 (277)
T 3pvj_A 13 GAQISGVDISRDIS---AEERDAIEQALLQHQVLFLRDQPINPEQQ---ARFAARF 62 (277)
T ss_dssp CEEEESCCTTSCCC---HHHHHHHHHHHHHHSEEEESSCCCCHHHH---HHHHGGG
T ss_pred eEEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHh
Confidence 35678899987432 57789999999999999999998876543 3345554
No 30
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=30.17 E-value=69 Score=26.56 Aligned_cols=43 Identities=9% Similarity=0.201 Sum_probs=30.9
Q ss_pred EEEEechhHHHhhCCcc----ccccceEeeCCCCceeeeEE-eecCCC
Q 042088 197 FTVNIGGQIQVLSNDRY----KSVLHRAIVNCNKERISIPT-IYCPSP 239 (286)
Q Consensus 197 ~vVnvGd~L~~~TnG~~----ks~~HRV~~~~~~~R~Si~~-F~~P~~ 239 (286)
.-+.||+.-..|..|.. -|-.|.|.+.+.+.|+-+.+ |.+|+.
T Consensus 139 ~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 139 CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 34557777777777754 36789999988889987765 556654
No 31
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=30.07 E-value=53 Score=18.84 Aligned_cols=19 Identities=37% Similarity=0.609 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHhhcCeEEE
Q 042088 55 SDVVKQTGQACQDYGFFRT 73 (286)
Q Consensus 55 ~~~~~~l~~A~~~~Gff~l 73 (286)
..+++.|.-.|.+-|||+-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 5788999999999999983
No 32
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=26.37 E-value=35 Score=29.74 Aligned_cols=37 Identities=8% Similarity=-0.012 Sum_probs=30.2
Q ss_pred CCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCC
Q 042088 40 CIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGI 78 (286)
Q Consensus 40 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi 78 (286)
.||++|+.... ...++.+.+.+++.+.-.+.+.|||+
T Consensus 156 ~v~~~~y~~~~--~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIA--LDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSS--CCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCC--CCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 69999987642 14677889999999999999999995
No 33
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=22.88 E-value=70 Score=28.26 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=17.8
Q ss_pred cccceEeeCCCCceeeeEEee
Q 042088 215 SVLHRAIVNCNKERISIPTIY 235 (286)
Q Consensus 215 s~~HRV~~~~~~~R~Si~~F~ 235 (286)
+..|+|.+.++.+|+.+.+=+
T Consensus 155 ~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 155 ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp TSCEEEEESSSSCCCEEEEEE
T ss_pred CCeeEEEcCCCCCeEEEEEEe
Confidence 358999999989999988755
No 34
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=22.14 E-value=1.7e+02 Score=23.34 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=30.7
Q ss_pred hhHHHHHHHHHHhhcC-eEEEEe-CCCCHHHHHHHHHHHHH
Q 042088 54 RSDVVKQTGQACQDYG-FFRTEN-NGIPEEVMDKMLCLSRQ 92 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~G-ff~l~n-hGi~~~~~~~~~~~~~~ 92 (286)
..+.+++|.+.+++.. .+++++ +|++.+.+.++....++
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678899999999998 776665 58998888888776654
No 35
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=21.91 E-value=1.7e+02 Score=23.51 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHHHHH
Q 042088 54 RSDVVKQTGQACQDYGFFRTENN-GIPEEVMDKMLCLSRQF 93 (286)
Q Consensus 54 ~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~f 93 (286)
..+.+++|.+.+++...++++++ |++.+.+.++....++-
T Consensus 8 K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~ 48 (180)
T 1zav_A 8 KELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREK 48 (180)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 46788999999999999888864 89998888888777653
No 36
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=20.60 E-value=29 Score=29.64 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=32.9
Q ss_pred CCCceEeCCCCCCCChhHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHHHHH
Q 042088 39 DCIPQIDLRYLNGSNRSDVVKQTGQACQDYGFFRTENNGIPEEVMDKMLCLSRQF 93 (286)
Q Consensus 39 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~f 93 (286)
++|+-|||+.+ + .++|.+++.++|++.+.+-.++.+. ..+.++.|
T Consensus 17 a~i~g~dl~~~-~------~~~l~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~ 61 (273)
T 1nx8_A 17 AYIDHRDFLEA-K------TETIKNLLMRQGFVVVKNLDIDSDT---FRDIYSAY 61 (273)
T ss_dssp EEECHHHHHHS-C------HHHHHHHHHHHCEEEECSCCCCHHH---HHHHHHTT
T ss_pred EEEECCCcccC-C------HHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 45677788775 2 7889999999999999998887543 33344544
Done!