Query 042091
Match_columns 1023
No_of_seqs 498 out of 3432
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:47:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042091.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042091hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 1E-203 2E-208 1717.6 66.7 967 34-1017 4-1023(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 1E-156 3E-161 1334.9 60.1 876 92-1003 7-969 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-144 5E-149 1364.8 96.7 886 93-1001 43-940 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 9E-141 2E-145 1330.0 91.6 866 90-1002 8-1047(1053)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-136 2E-141 1287.8 94.1 842 90-1002 5-882 (884)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-136 3E-141 1297.1 93.3 878 87-1002 15-985 (997)
7 COG0474 MgtA Cation transport 100.0 3E-135 6E-140 1269.2 87.5 852 96-998 32-912 (917)
8 PRK15122 magnesium-transportin 100.0 7E-132 2E-136 1236.7 88.4 825 89-998 27-893 (903)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 4E-131 8E-136 1240.0 89.8 835 140-1001 1-917 (917)
10 PRK10517 magnesium-transportin 100.0 4E-130 8E-135 1219.3 88.5 813 93-999 53-894 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-129 4E-134 1214.2 87.5 813 92-999 18-859 (867)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 1E-123 3E-128 1060.3 39.9 890 74-1001 24-1006(1019)
13 TIGR01647 ATPase-IIIA_H plasma 100.0 1E-118 2E-123 1104.7 81.6 747 108-958 1-749 (755)
14 TIGR01657 P-ATPase-V P-type AT 100.0 8E-119 2E-123 1142.3 75.5 836 59-976 98-1045(1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 1E-107 2E-112 1043.6 75.3 840 123-1011 1-1055(1057)
16 PLN03190 aminophospholipid tra 100.0 3E-101 7E-106 972.1 81.1 840 122-1012 86-1151(1178)
17 PRK14010 potassium-transportin 100.0 3.7E-92 8E-97 839.9 62.1 548 142-815 28-586 (673)
18 KOG0208 Cation transport ATPas 100.0 2.6E-92 5.6E-97 816.0 58.0 774 106-952 158-1066(1140)
19 PRK01122 potassium-transportin 100.0 8.7E-91 1.9E-95 828.9 61.9 555 141-818 28-596 (679)
20 TIGR01497 kdpB K+-transporting 100.0 7.1E-87 1.5E-91 793.3 63.0 546 141-807 27-583 (675)
21 KOG0206 P-type ATPase [General 100.0 1.5E-88 3.1E-93 826.2 36.1 847 119-1011 28-1085(1151)
22 KOG0210 P-type ATPase [Inorgan 100.0 1.1E-85 2.4E-90 731.0 43.9 808 119-1011 75-1049(1051)
23 KOG0209 P-type ATPase [Inorgan 100.0 7.9E-85 1.7E-89 736.9 49.8 850 58-1005 126-1153(1160)
24 COG2217 ZntA Cation transport 100.0 8.4E-84 1.8E-88 767.9 54.9 509 172-815 172-682 (713)
25 KOG0205 Plasma membrane H+-tra 100.0 5.3E-84 1.1E-88 714.8 44.1 659 92-835 21-686 (942)
26 PRK11033 zntA zinc/cadmium/mer 100.0 3.5E-78 7.5E-83 742.5 62.4 514 154-815 195-711 (741)
27 KOG0207 Cation transport ATPas 100.0 7.6E-79 1.7E-83 706.2 43.3 565 170-850 337-906 (951)
28 TIGR01494 ATPase_P-type ATPase 100.0 1.2E-76 2.5E-81 706.8 53.1 492 182-843 5-498 (499)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 9.8E-75 2.1E-79 694.1 57.1 498 171-816 51-550 (562)
30 TIGR01525 ATPase-IB_hvy heavy 100.0 8.4E-75 1.8E-79 697.0 52.9 523 153-816 6-531 (556)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.1E-74 6.6E-79 687.7 53.8 505 151-815 4-509 (536)
32 PRK10671 copA copper exporting 100.0 1.2E-73 2.7E-78 716.4 60.1 510 171-813 283-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 2.8E-60 6E-65 516.5 39.0 499 184-802 77-579 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.1E-33 2.3E-38 304.2 21.7 225 179-433 2-230 (230)
35 KOG4383 Uncharacterized conser 99.9 4.2E-22 9.1E-27 222.4 34.1 435 564-1000 698-1329(1354)
36 PF00689 Cation_ATPase_C: Cati 99.9 3.5E-24 7.6E-29 221.6 14.1 179 821-999 1-182 (182)
37 PF00702 Hydrolase: haloacid d 99.9 8.4E-24 1.8E-28 224.5 11.2 211 437-751 1-215 (215)
38 COG4087 Soluble P-type ATPase 99.5 1.6E-13 3.4E-18 125.7 11.6 126 626-784 19-146 (152)
39 PF13246 Hydrolase_like2: Puta 99.5 5.2E-14 1.1E-18 127.2 8.2 73 503-576 17-91 (91)
40 PRK10513 sugar phosphate phosp 99.0 1.5E-09 3.3E-14 119.7 13.5 67 718-785 195-265 (270)
41 PRK01158 phosphoglycolate phos 99.0 1E-09 2.3E-14 117.9 11.6 148 637-785 20-226 (230)
42 PRK15126 thiamin pyrimidine py 99.0 2E-09 4.2E-14 118.9 13.3 157 625-785 10-259 (272)
43 PF00690 Cation_ATPase_N: Cati 99.0 4.5E-10 9.7E-15 96.1 6.4 68 90-159 2-69 (69)
44 TIGR01487 SPP-like sucrose-pho 99.0 1.2E-09 2.7E-14 116.1 10.5 146 637-783 18-214 (215)
45 PRK10976 putative hydrolase; P 99.0 3.1E-09 6.8E-14 116.9 13.5 148 637-785 19-261 (266)
46 COG0561 Cof Predicted hydrolas 99.0 4.6E-09 1E-13 115.4 14.7 148 638-786 21-259 (264)
47 TIGR02137 HSK-PSP phosphoserin 99.0 4E-09 8.7E-14 110.5 12.3 125 637-787 68-198 (203)
48 TIGR01482 SPP-subfamily Sucros 98.9 7.2E-09 1.6E-13 111.0 12.1 148 637-785 15-222 (225)
49 PRK10530 pyridoxal phosphate ( 98.9 9.3E-09 2E-13 113.5 12.7 66 719-785 199-268 (272)
50 PRK11133 serB phosphoserine ph 98.9 6.4E-09 1.4E-13 116.3 11.2 131 637-785 181-316 (322)
51 PLN02887 hydrolase family prot 98.9 1.4E-08 3.1E-13 121.2 13.3 66 719-785 507-576 (580)
52 smart00831 Cation_ATPase_N Cat 98.8 6.2E-09 1.3E-13 87.7 6.7 61 101-163 3-63 (64)
53 PF08282 Hydrolase_3: haloacid 98.8 1.2E-08 2.5E-13 110.8 10.2 148 636-784 14-254 (254)
54 TIGR01486 HAD-SF-IIB-MPGP mann 98.8 6.4E-08 1.4E-12 105.8 13.9 147 638-785 17-253 (256)
55 TIGR00338 serB phosphoserine p 98.8 3.9E-08 8.4E-13 104.9 10.9 129 637-783 85-218 (219)
56 PRK03669 mannosyl-3-phosphogly 98.7 1.5E-07 3.2E-12 103.8 14.5 148 637-785 24-265 (271)
57 COG0560 SerB Phosphoserine pho 98.7 6.8E-08 1.5E-12 101.8 11.0 118 636-773 76-200 (212)
58 PF12515 CaATP_NAI: Ca2+-ATPas 98.7 8.2E-09 1.8E-13 77.8 2.6 45 32-77 1-46 (47)
59 TIGR02726 phenyl_P_delta pheny 98.7 5.8E-08 1.3E-12 98.3 9.7 104 644-778 41-144 (169)
60 TIGR00099 Cof-subfamily Cof su 98.7 1.5E-07 3.3E-12 103.0 12.5 146 637-783 16-255 (256)
61 TIGR01670 YrbI-phosphatas 3-de 98.6 1E-07 2.2E-12 95.6 9.1 105 645-784 36-145 (154)
62 PRK00192 mannosyl-3-phosphogly 98.5 8.7E-07 1.9E-11 97.9 14.0 149 636-785 20-267 (273)
63 PRK08238 hypothetical protein; 98.5 2.8E-05 6E-10 91.8 25.7 99 637-763 72-170 (479)
64 PRK13582 thrH phosphoserine ph 98.4 1.4E-06 3E-11 91.9 11.8 126 637-785 68-196 (205)
65 KOG1615 Phosphoserine phosphat 98.4 3.6E-07 7.9E-12 90.4 6.3 110 637-757 88-199 (227)
66 PRK09484 3-deoxy-D-manno-octul 98.4 7.2E-07 1.6E-11 92.2 9.0 96 644-774 55-154 (183)
67 TIGR02471 sucr_syn_bact_C sucr 98.4 1.3E-06 2.9E-11 94.3 10.6 144 640-785 18-232 (236)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 2E-06 4.3E-11 90.3 9.7 117 637-769 80-200 (201)
69 TIGR02461 osmo_MPG_phos mannos 98.2 8.4E-06 1.8E-10 87.1 11.8 56 635-690 13-68 (225)
70 COG1778 Low specificity phosph 98.2 4.4E-06 9.5E-11 80.3 8.0 115 644-793 42-164 (170)
71 TIGR03333 salvage_mtnX 2-hydro 98.1 1.5E-05 3.2E-10 84.8 11.5 137 636-785 69-209 (214)
72 TIGR02463 MPGP_rel mannosyl-3- 98.1 2.9E-05 6.3E-10 82.9 12.7 52 639-690 18-70 (221)
73 PF12710 HAD: haloacid dehalog 98.0 3.6E-06 7.8E-11 87.5 4.6 92 640-748 92-192 (192)
74 PLN02954 phosphoserine phospha 98.0 2.8E-05 6.1E-10 83.1 11.4 128 637-783 84-222 (224)
75 TIGR01485 SPP_plant-cyano sucr 98.0 2.7E-05 5.9E-10 84.8 11.2 150 635-785 19-244 (249)
76 TIGR01488 HAD-SF-IB Haloacid D 97.9 1.8E-05 3.9E-10 81.2 7.2 98 637-750 73-177 (177)
77 PRK13222 phosphoglycolate phos 97.9 7.1E-05 1.5E-09 80.0 11.8 128 636-786 92-223 (226)
78 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 3.5E-05 7.6E-10 79.7 9.1 113 637-755 72-186 (188)
79 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 3.9E-05 8.5E-10 80.6 9.0 106 635-757 85-197 (202)
80 PRK09552 mtnX 2-hydroxy-3-keto 97.9 4.7E-05 1E-09 81.2 9.6 135 637-785 74-213 (219)
81 COG0546 Gph Predicted phosphat 97.9 9.5E-05 2.1E-09 78.9 11.4 128 635-785 87-218 (220)
82 PRK12702 mannosyl-3-phosphogly 97.8 0.00019 4.1E-09 77.8 11.9 53 636-688 17-69 (302)
83 PRK14502 bifunctional mannosyl 97.8 0.00017 3.8E-09 86.4 12.8 41 638-678 434-474 (694)
84 TIGR01454 AHBA_synth_RP 3-amin 97.8 0.00014 3.1E-09 76.5 10.7 126 637-785 75-204 (205)
85 cd01427 HAD_like Haloacid deha 97.7 7.4E-05 1.6E-09 72.2 7.7 117 633-754 20-137 (139)
86 PLN02382 probable sucrose-phos 97.7 0.00022 4.8E-09 83.0 12.7 147 638-785 29-257 (413)
87 PRK10187 trehalose-6-phosphate 97.6 0.00022 4.8E-09 78.3 9.7 139 637-784 36-240 (266)
88 PRK13223 phosphoglycolate phos 97.4 0.0007 1.5E-08 74.7 10.9 127 636-785 100-230 (272)
89 PRK13288 pyrophosphatase PpaX; 97.4 0.00068 1.5E-08 71.9 10.0 125 637-784 82-210 (214)
90 TIGR01449 PGP_bact 2-phosphogl 97.4 0.00072 1.6E-08 71.6 10.0 123 637-782 85-211 (213)
91 PTZ00174 phosphomannomutase; P 97.4 0.00078 1.7E-08 73.2 10.5 54 718-772 187-245 (247)
92 PRK10826 2-deoxyglucose-6-phos 97.2 0.0017 3.6E-08 69.4 9.9 119 636-780 91-215 (222)
93 PRK13226 phosphoglycolate phos 97.2 0.0024 5.1E-08 68.6 10.9 127 637-786 95-226 (229)
94 TIGR01484 HAD-SF-IIB HAD-super 97.1 0.0011 2.3E-08 69.8 7.8 118 637-756 17-204 (204)
95 PRK11590 hypothetical protein; 97.1 0.0019 4.1E-08 68.4 9.5 104 637-757 95-202 (211)
96 PRK14501 putative bifunctional 97.1 0.0022 4.7E-08 80.8 11.1 171 594-785 481-721 (726)
97 TIGR01545 YfhB_g-proteo haloac 97.1 0.0026 5.7E-08 67.2 9.7 106 637-757 94-201 (210)
98 PRK13225 phosphoglycolate phos 97.0 0.0046 1E-07 68.1 11.2 121 637-784 142-267 (273)
99 TIGR03351 PhnX-like phosphonat 97.0 0.0047 1E-07 65.8 10.7 125 636-783 86-218 (220)
100 COG4030 Uncharacterized protei 97.0 0.0066 1.4E-07 62.0 10.8 145 637-785 83-262 (315)
101 PLN03243 haloacid dehalogenase 96.9 0.0064 1.4E-07 66.5 11.5 121 637-780 109-230 (260)
102 PLN02770 haloacid dehalogenase 96.9 0.0063 1.4E-07 66.2 11.0 117 637-774 108-227 (248)
103 TIGR01422 phosphonatase phosph 96.8 0.0096 2.1E-07 64.9 11.6 97 637-753 99-196 (253)
104 TIGR01544 HAD-SF-IE haloacid d 96.7 0.014 2.9E-07 63.7 11.7 130 637-784 121-273 (277)
105 PRK13478 phosphonoacetaldehyde 96.7 0.013 2.8E-07 64.5 11.8 93 637-752 101-197 (267)
106 PRK11587 putative phosphatase; 96.6 0.013 2.8E-07 62.3 11.0 114 637-773 83-198 (218)
107 TIGR01548 HAD-SF-IA-hyp1 haloa 96.6 0.0076 1.7E-07 63.0 9.0 94 635-750 104-197 (197)
108 PF05116 S6PP: Sucrose-6F-phos 96.6 0.0059 1.3E-07 66.3 8.4 46 717-763 163-212 (247)
109 PRK11009 aphA acid phosphatase 96.5 0.0067 1.5E-07 65.0 7.7 90 637-754 114-207 (237)
110 COG3769 Predicted hydrolase (H 96.5 0.03 6.4E-07 57.4 11.7 38 641-678 27-64 (274)
111 PRK06769 hypothetical protein; 96.4 0.011 2.5E-07 60.4 8.7 113 624-756 11-135 (173)
112 TIGR01672 AphA HAD superfamily 96.4 0.0078 1.7E-07 64.5 7.6 89 637-753 114-206 (237)
113 TIGR01428 HAD_type_II 2-haloal 96.2 0.019 4.2E-07 59.9 9.2 95 637-754 92-188 (198)
114 TIGR01990 bPGM beta-phosphoglu 96.0 0.014 3E-07 60.1 7.0 94 637-753 87-180 (185)
115 COG4359 Uncharacterized conser 96.0 0.016 3.4E-07 57.7 6.7 104 637-755 73-183 (220)
116 PRK06698 bifunctional 5'-methy 96.0 0.033 7.2E-07 66.4 11.1 123 637-785 330-454 (459)
117 TIGR02253 CTE7 HAD superfamily 96.0 0.021 4.5E-07 60.7 8.5 94 637-753 94-190 (221)
118 PRK08942 D,D-heptose 1,7-bisph 96.0 0.047 1E-06 56.2 10.8 128 637-785 29-177 (181)
119 PLN02575 haloacid dehalogenase 96.0 0.052 1.1E-06 62.1 11.7 121 637-780 216-337 (381)
120 TIGR01509 HAD-SF-IA-v3 haloaci 95.9 0.032 6.8E-07 57.2 9.1 94 637-752 85-178 (183)
121 smart00775 LNS2 LNS2 domain. T 95.9 0.054 1.2E-06 54.4 10.2 102 635-753 25-141 (157)
122 PRK14988 GMP/IMP nucleotidase; 95.9 0.034 7.3E-07 59.5 9.3 95 637-754 93-189 (224)
123 TIGR01662 HAD-SF-IIIA HAD-supe 95.8 0.038 8.2E-07 53.6 8.3 93 636-753 24-126 (132)
124 PHA02530 pseT polynucleotide k 95.7 0.025 5.4E-07 63.4 7.7 108 634-754 184-292 (300)
125 PF13419 HAD_2: Haloacid dehal 95.7 0.022 4.7E-07 57.5 6.6 97 636-753 76-172 (176)
126 TIGR02009 PGMB-YQAB-SF beta-ph 95.6 0.027 5.9E-07 57.9 7.0 92 637-753 88-181 (185)
127 TIGR02254 YjjG/YfnB HAD superf 95.6 0.044 9.6E-07 58.2 8.6 122 637-782 97-222 (224)
128 PLN02580 trehalose-phosphatase 95.5 0.088 1.9E-06 60.2 11.1 63 718-785 300-374 (384)
129 TIGR01685 MDP-1 magnesium-depe 95.5 0.074 1.6E-06 54.2 9.5 111 627-757 35-156 (174)
130 PLN02779 haloacid dehalogenase 95.3 0.073 1.6E-06 59.2 9.6 118 637-773 144-263 (286)
131 PLN02940 riboflavin kinase 95.3 0.067 1.4E-06 62.0 9.4 97 637-754 93-190 (382)
132 PRK09449 dUMP phosphatase; Pro 95.2 0.1 2.2E-06 55.6 9.9 124 637-784 95-222 (224)
133 TIGR01668 YqeG_hyp_ppase HAD s 94.7 0.09 1.9E-06 53.6 7.6 85 637-753 43-131 (170)
134 TIGR01656 Histidinol-ppas hist 94.5 0.12 2.6E-06 51.3 7.7 98 637-754 27-141 (147)
135 COG2179 Predicted hydrolase of 94.4 0.15 3.4E-06 50.3 7.9 108 597-751 20-131 (175)
136 TIGR02252 DREG-2 REG-2-like, H 94.4 0.13 2.8E-06 53.9 8.1 95 637-753 105-200 (203)
137 TIGR01533 lipo_e_P4 5'-nucleot 94.3 0.19 4.2E-06 54.8 9.4 86 635-747 116-204 (266)
138 PLN03017 trehalose-phosphatase 94.1 0.69 1.5E-05 52.6 13.3 47 624-671 118-166 (366)
139 TIGR00213 GmhB_yaeD D,D-heptos 94.0 0.24 5.3E-06 50.7 8.9 28 637-664 26-53 (176)
140 TIGR01549 HAD-SF-IA-v1 haloaci 93.8 0.22 4.8E-06 49.5 8.0 91 637-751 64-154 (154)
141 PLN02811 hydrolase 93.7 0.19 4.2E-06 53.4 7.9 98 637-755 78-181 (220)
142 PF06888 Put_Phosphatase: Puta 93.6 0.31 6.6E-06 52.1 9.1 103 637-746 71-184 (234)
143 smart00577 CPDc catalytic doma 93.6 0.091 2E-06 52.2 4.8 93 636-755 44-139 (148)
144 PLN02205 alpha,alpha-trehalose 93.6 0.25 5.3E-06 62.9 9.7 51 624-674 603-654 (854)
145 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.5 0.54 1.2E-05 50.9 10.9 94 630-751 17-115 (242)
146 TIGR01675 plant-AP plant acid 93.4 0.38 8.3E-06 51.1 9.1 87 636-745 119-210 (229)
147 TIGR01261 hisB_Nterm histidino 93.2 0.2 4.2E-06 50.6 6.5 96 637-756 29-145 (161)
148 TIGR00685 T6PP trehalose-phosp 92.8 0.14 3E-06 55.6 5.0 68 713-785 161-240 (244)
149 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.4 1.8 4E-05 47.2 13.3 41 638-678 22-65 (257)
150 PRK10563 6-phosphogluconate ph 92.4 0.3 6.4E-06 51.9 6.9 97 637-756 88-184 (221)
151 PLN02919 haloacid dehalogenase 92.4 0.39 8.5E-06 62.9 9.3 136 637-793 161-300 (1057)
152 TIGR01681 HAD-SF-IIIC HAD-supe 92.4 0.34 7.3E-06 46.8 6.6 39 637-675 29-68 (128)
153 TIGR01691 enolase-ppase 2,3-di 92.2 0.32 7E-06 51.7 6.8 99 635-756 93-194 (220)
154 TIGR02247 HAD-1A3-hyp Epoxide 92.0 0.25 5.3E-06 52.1 5.7 97 637-754 94-192 (211)
155 PRK05446 imidazole glycerol-ph 91.6 0.54 1.2E-05 53.5 8.0 97 637-755 30-145 (354)
156 PLN02423 phosphomannomutase 91.6 1.3 2.7E-05 48.1 10.6 39 718-757 188-231 (245)
157 PF09419 PGP_phosphatase: Mito 91.5 0.66 1.4E-05 46.8 7.7 81 635-746 57-152 (168)
158 TIGR01664 DNA-3'-Pase DNA 3'-p 90.9 0.82 1.8E-05 46.4 7.9 94 638-754 43-158 (166)
159 PF13344 Hydrolase_6: Haloacid 90.5 0.51 1.1E-05 43.6 5.4 49 630-678 7-58 (101)
160 PRK10444 UMP phosphatase; Prov 90.5 2 4.4E-05 46.6 11.0 48 630-677 10-60 (248)
161 KOG3040 Predicted sugar phosph 90.4 2 4.4E-05 44.0 9.8 52 627-678 13-67 (262)
162 PRK09456 ?-D-glucose-1-phospha 89.9 0.76 1.6E-05 48.0 6.9 95 637-754 84-181 (199)
163 TIGR01686 FkbH FkbH-like domai 89.8 0.85 1.9E-05 51.6 7.7 95 637-757 31-129 (320)
164 PLN02177 glycerol-3-phosphate 89.8 4.6 0.0001 48.3 14.0 156 638-823 111-271 (497)
165 KOG3120 Predicted haloacid deh 89.7 1.6 3.5E-05 45.2 8.6 113 637-763 84-215 (256)
166 TIGR01457 HAD-SF-IIA-hyp2 HAD- 88.6 4.7 0.0001 43.8 12.1 47 633-679 13-62 (249)
167 PLN02645 phosphoglycolate phos 88.0 1.5 3.2E-05 49.5 7.9 48 630-677 37-87 (311)
168 PRK10725 fructose-1-P/6-phosph 87.7 1.5 3.2E-05 45.1 7.2 94 638-754 89-182 (188)
169 PHA02597 30.2 hypothetical pro 86.8 2 4.3E-05 44.7 7.6 93 637-754 74-170 (197)
170 TIGR01993 Pyr-5-nucltdase pyri 86.1 2.2 4.7E-05 43.8 7.4 98 637-754 84-181 (184)
171 PF08235 LNS2: LNS2 (Lipin/Ned 85.8 5.6 0.00012 39.7 9.6 103 635-753 25-141 (157)
172 PLN02151 trehalose-phosphatase 84.5 8.3 0.00018 43.8 11.4 63 718-785 268-342 (354)
173 COG0241 HisB Histidinol phosph 80.8 6.6 0.00014 40.2 8.0 98 637-753 31-144 (181)
174 COG0637 Predicted phosphatase/ 80.0 4.8 0.0001 42.8 7.2 99 636-755 85-183 (221)
175 TIGR01680 Veg_Stor_Prot vegeta 78.3 11 0.00024 41.1 9.1 88 635-744 143-235 (275)
176 PF03767 Acid_phosphat_B: HAD 77.8 2.3 5E-05 45.6 3.9 90 636-746 114-207 (229)
177 TIGR01689 EcbF-BcbF capsule bi 77.7 6.8 0.00015 37.7 6.6 33 636-668 23-55 (126)
178 COG3700 AphA Acid phosphatase 73.2 7.6 0.00016 38.9 5.7 87 638-752 115-205 (237)
179 PRK10748 flavin mononucleotide 72.5 7.6 0.00016 41.8 6.3 92 637-757 113-207 (238)
180 TIGR02251 HIF-SF_euk Dullard-l 72.4 2.2 4.7E-05 43.1 1.9 42 635-677 40-81 (162)
181 TIGR01684 viral_ppase viral ph 72.1 6.2 0.00013 43.4 5.4 41 638-678 146-187 (301)
182 TIGR01452 PGP_euk phosphoglyco 71.5 18 0.00038 40.0 9.0 45 633-677 14-61 (279)
183 COG1877 OtsB Trehalose-6-phosp 71.1 16 0.00035 39.9 8.3 134 629-765 32-235 (266)
184 PRK14194 bifunctional 5,10-met 69.6 12 0.00026 41.6 7.0 64 710-773 136-208 (301)
185 PF02358 Trehalose_PPase: Treh 69.1 15 0.00032 39.4 7.6 60 714-774 160-233 (235)
186 PHA03398 viral phosphatase sup 68.0 8.8 0.00019 42.3 5.4 41 638-678 148-189 (303)
187 TIGR01657 P-ATPase-V P-type AT 67.1 3.2E+02 0.0068 36.5 20.6 75 179-265 195-273 (1054)
188 TIGR01493 HAD-SF-IA-v2 Haloaci 66.5 6.3 0.00014 39.9 3.9 85 637-749 90-174 (175)
189 PRK14179 bifunctional 5,10-met 63.8 24 0.00053 38.9 7.9 64 710-773 135-207 (284)
190 COG1011 Predicted hydrolase (H 63.3 28 0.00062 36.7 8.4 121 637-784 99-226 (229)
191 COG0647 NagD Predicted sugar p 63.3 19 0.00041 39.4 6.9 47 628-674 15-61 (269)
192 PRK14188 bifunctional 5,10-met 61.8 20 0.00043 39.9 6.8 64 710-773 135-207 (296)
193 PRK14174 bifunctional 5,10-met 56.5 26 0.00055 39.0 6.5 63 710-773 136-212 (295)
194 TIGR01647 ATPase-IIIA_H plasma 56.4 1.6E+02 0.0035 37.6 14.6 100 180-290 58-164 (755)
195 PRK14169 bifunctional 5,10-met 54.8 36 0.00078 37.5 7.3 138 636-773 11-205 (282)
196 TIGR01663 PNK-3'Pase polynucle 52.7 39 0.00084 40.8 7.7 40 638-677 198-249 (526)
197 PRK14184 bifunctional 5,10-met 52.4 36 0.00078 37.6 6.8 71 702-773 126-210 (286)
198 PRK14172 bifunctional 5,10-met 49.3 43 0.00094 36.8 6.8 64 710-773 135-207 (278)
199 PRK14190 bifunctional 5,10-met 49.3 45 0.00098 36.8 7.0 74 700-773 125-207 (284)
200 PTZ00445 p36-lilke protein; Pr 49.1 18 0.00038 37.9 3.6 135 591-752 29-199 (219)
201 PRK14182 bifunctional 5,10-met 46.7 54 0.0012 36.2 7.0 62 712-773 136-206 (282)
202 TIGR01456 CECR5 HAD-superfamil 46.4 71 0.0015 36.1 8.4 48 630-677 9-64 (321)
203 TIGR02244 HAD-IG-Ncltidse HAD 46.4 68 0.0015 36.5 8.0 37 639-675 186-223 (343)
204 PF05822 UMPH-1: Pyrimidine 5' 45.3 38 0.00083 36.4 5.5 133 637-784 90-241 (246)
205 PRK14166 bifunctional 5,10-met 44.0 58 0.0013 35.9 6.8 63 711-773 135-206 (282)
206 PF06570 DUF1129: Protein of u 43.9 3.9E+02 0.0085 27.9 12.9 15 980-994 181-195 (206)
207 PRK14170 bifunctional 5,10-met 43.1 34 0.00074 37.7 4.8 138 636-773 12-206 (284)
208 PRK14189 bifunctional 5,10-met 41.2 2.8E+02 0.0062 30.7 11.6 141 629-773 35-207 (285)
209 PF00389 2-Hacid_dh: D-isomer 41.1 1.8E+02 0.0038 27.9 9.1 35 722-757 53-89 (133)
210 PRK14178 bifunctional 5,10-met 40.9 65 0.0014 35.5 6.6 75 699-773 118-201 (279)
211 TIGR01106 ATPase-IIC_X-K sodiu 40.3 4.7E+02 0.01 34.6 15.5 20 232-251 149-168 (997)
212 PLN02897 tetrahydrofolate dehy 39.7 93 0.002 35.3 7.6 63 711-773 192-263 (345)
213 COG3329 Predicted permease [Ge 39.1 1.4E+02 0.0031 32.9 8.4 62 115-176 186-247 (372)
214 PRK14167 bifunctional 5,10-met 38.8 42 0.00091 37.3 4.8 62 710-773 134-210 (297)
215 PF13380 CoA_binding_2: CoA bi 37.9 34 0.00074 32.3 3.4 41 637-677 63-104 (116)
216 PRK14191 bifunctional 5,10-met 37.1 48 0.001 36.6 4.8 72 702-773 126-206 (285)
217 PRK14175 bifunctional 5,10-met 37.1 38 0.00083 37.4 4.1 64 710-773 135-207 (286)
218 cd02071 MM_CoA_mut_B12_BD meth 35.0 55 0.0012 31.1 4.4 79 600-678 23-105 (122)
219 PF00122 E1-E2_ATPase: E1-E2 A 35.0 2.2E+02 0.0049 30.0 9.7 62 183-254 2-64 (230)
220 PLN03063 alpha,alpha-trehalose 33.9 2.1E+02 0.0045 36.8 10.5 69 595-675 497-571 (797)
221 PRK14186 bifunctional 5,10-met 32.8 54 0.0012 36.4 4.4 63 711-773 136-207 (297)
222 TIGR02230 ATPase_gene1 F0F1-AT 31.7 1.4E+02 0.0029 27.6 6.0 31 940-970 37-67 (100)
223 PF03120 DNA_ligase_OB: NAD-de 31.5 23 0.0005 31.3 1.0 21 225-245 46-67 (82)
224 TIGR00216 ispH_lytB (E)-4-hydr 31.3 2.9E+02 0.0063 30.6 9.7 160 562-757 73-262 (280)
225 PRK14185 bifunctional 5,10-met 31.2 73 0.0016 35.4 5.1 63 710-773 134-210 (293)
226 TIGR01501 MthylAspMutase methy 31.2 96 0.0021 30.2 5.3 78 600-677 25-112 (134)
227 TIGR02250 FCP1_euk FCP1-like p 31.2 74 0.0016 31.8 4.7 42 636-678 57-98 (156)
228 TIGR01517 ATPase-IIB_Ca plasma 30.6 4.2E+02 0.0091 34.9 12.7 37 217-254 185-221 (941)
229 PF12710 HAD: haloacid dehalog 30.5 22 0.00048 36.3 0.9 14 440-453 1-14 (192)
230 PF15584 Imm44: Immunity prote 30.3 23 0.0005 31.6 0.8 19 231-249 13-31 (94)
231 TIGR01524 ATPase-IIIB_Mg magne 30.2 8.9E+02 0.019 31.5 15.5 36 232-267 139-175 (867)
232 PF03419 Peptidase_U4: Sporula 29.2 6.5E+02 0.014 27.9 12.4 16 829-844 8-23 (293)
233 PRK14180 bifunctional 5,10-met 29.1 81 0.0017 34.8 4.9 64 710-773 135-207 (282)
234 PRK14192 bifunctional 5,10-met 29.0 3E+02 0.0064 30.5 9.4 44 635-678 12-65 (283)
235 CHL00200 trpA tryptophan synth 28.9 2.8E+02 0.0062 30.3 9.2 30 717-746 187-216 (263)
236 TIGR01459 HAD-SF-IIA-hyp4 HAD- 28.7 72 0.0016 34.3 4.5 96 639-754 140-237 (242)
237 PRK10517 magnesium-transportin 28.1 1.5E+03 0.032 29.7 16.9 87 176-270 121-212 (902)
238 PRK01045 ispH 4-hydroxy-3-meth 27.9 3.3E+02 0.007 30.5 9.4 49 562-613 73-122 (298)
239 PF02401 LYTB: LytB protein; 27.9 72 0.0016 35.3 4.3 159 563-757 72-263 (281)
240 PF06506 PrpR_N: Propionate ca 27.6 1.6E+02 0.0034 30.0 6.6 107 641-796 65-172 (176)
241 PLN02591 tryptophan synthase 27.5 3.8E+02 0.0082 29.1 9.7 86 640-749 118-209 (250)
242 PF01455 HupF_HypC: HupF/HypC 27.3 1.1E+02 0.0024 26.0 4.3 31 211-241 17-50 (68)
243 cd00860 ThrRS_anticodon ThrRS 26.4 1.4E+02 0.0031 26.0 5.4 47 631-677 6-53 (91)
244 PRK11507 ribosome-associated p 26.0 65 0.0014 27.5 2.7 26 214-239 38-63 (70)
245 PRK14193 bifunctional 5,10-met 25.6 86 0.0019 34.7 4.4 64 710-773 135-209 (284)
246 COG0078 ArgF Ornithine carbamo 25.6 1.8E+02 0.0039 32.3 6.7 74 654-756 100-180 (310)
247 KOG0206 P-type ATPase [General 25.4 81 0.0018 41.5 4.7 62 180-241 88-159 (1151)
248 PRK14183 bifunctional 5,10-met 24.7 1E+02 0.0022 34.1 4.6 64 710-773 134-206 (281)
249 PF05297 Herpes_LMP1: Herpesvi 24.6 25 0.00054 37.9 0.0 6 855-860 13-18 (381)
250 PRK15122 magnesium-transportin 24.5 1.4E+03 0.029 30.0 15.7 35 232-266 162-197 (903)
251 PRK14177 bifunctional 5,10-met 24.3 6.4E+02 0.014 28.0 10.8 140 630-773 37-208 (284)
252 cd05017 SIS_PGI_PMI_1 The memb 24.1 1.2E+02 0.0027 28.4 4.7 38 637-676 54-91 (119)
253 PF12689 Acid_PPase: Acid Phos 23.3 1.2E+02 0.0027 30.7 4.7 41 637-677 45-86 (169)
254 COG2503 Predicted secreted aci 22.2 3.6E+02 0.0078 29.1 7.8 84 637-749 122-211 (274)
255 PRK06846 putative deaminase; V 22.1 1E+03 0.022 27.7 12.9 123 628-757 161-309 (410)
256 PF03129 HGTP_anticodon: Antic 22.1 1.7E+02 0.0036 26.0 5.0 48 630-677 3-54 (94)
257 PRK14168 bifunctional 5,10-met 21.8 1.3E+02 0.0028 33.5 4.9 62 711-773 139-214 (297)
258 PLN02616 tetrahydrofolate dehy 21.7 1.3E+02 0.0028 34.4 4.9 64 710-773 208-280 (364)
259 PRK14187 bifunctional 5,10-met 21.5 1.3E+02 0.0028 33.4 4.8 63 711-773 138-209 (294)
260 TIGR00381 cdhD CO dehydrogenas 21.1 6.3E+02 0.014 29.2 10.1 38 710-747 218-257 (389)
261 PLN03190 aminophospholipid tra 20.9 3.2E+02 0.007 36.8 9.1 70 172-254 132-201 (1178)
262 TIGR02854 spore_II_GA sigma-E 20.7 1.1E+03 0.023 26.2 11.9 16 829-844 8-23 (288)
263 PRK02261 methylaspartate mutas 20.6 1.5E+02 0.0033 28.9 4.6 79 599-677 26-114 (137)
264 PF13242 Hydrolase_like: HAD-h 20.3 73 0.0016 27.2 2.1 57 717-773 7-70 (75)
265 TIGR01460 HAD-SF-IIA Haloacid 20.3 1.1E+02 0.0024 32.7 4.0 45 633-677 10-58 (236)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-203 Score=1717.61 Aligned_cols=967 Identities=57% Similarity=0.896 Sum_probs=904.1
Q ss_pred CCCcccccCCCCChhhhhhHHHhhhhhhccccccccccchhhHHHHHHHHhhhhhhhc----------------------
Q 042091 34 SDPFDIAQAKHVPVASLKRWRQASLVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQV---------------------- 91 (1023)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~---------------------- 91 (1023)
+++|... ++|++.+++.|||.+...+++.||++|.+++.+.++..++++++|.+.+.
T Consensus 4 ~~~~~~~-~~n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~~~i~~ 82 (1034)
T KOG0204|consen 4 DKDFVVS-MKNSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYTLGIGA 82 (1034)
T ss_pred ccccccc-cccchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccccccCH
Confidence 4455444 88999999999998889999999999999888777666666433333211
Q ss_pred ------------------CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 042091 92 ------------------IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILI 153 (1023)
Q Consensus 92 ------------------~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll 153 (1023)
..++|+++.|+||+..||++++.|+.+||+.||+|.+|++++++||.|+|++++|.++++|+
T Consensus 83 e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~ 162 (1034)
T KOG0204|consen 83 EELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILM 162 (1034)
T ss_pred HHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHH
Confidence 13899999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceecc
Q 042091 154 VAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGE 233 (1023)
Q Consensus 154 ~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GD 233 (1023)
+||++|+.+++++++.+++||||++|+++++++++++++.||++++||++|++++++.+++|+|||++++|++.||||||
T Consensus 163 vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGD 242 (1034)
T KOG0204|consen 163 VAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGD 242 (1034)
T ss_pred HHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred EEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCC-CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccC
Q 042091 234 IVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH-KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISED 312 (1023)
Q Consensus 234 IV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~-~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 312 (1023)
|+.|+.||+|||||++++|++|.+|||+|||||++++|.. .+||+++||++.+|.++|+||++|++|+||++|..+.+.
T Consensus 243 Iv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 243 IVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred EEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 9999999999999999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhh
Q 042091 313 NGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392 (1023)
Q Consensus 313 ~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 392 (1023)
.+++||||.+++++|..++.+++.+|.+++++++.+|+.+++...++. ........++.++++|.++ +
T Consensus 323 ~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~-------V 390 (1034)
T KOG0204|consen 323 GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIA-------V 390 (1034)
T ss_pred CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhhe-------e
Confidence 989999999999999999999999999999999999999886655332 1233445677899999999 9
Q ss_pred hhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCC-
Q 042091 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDS- 471 (1023)
Q Consensus 393 ~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~- 471 (1023)
+++|+|+|||||+||++++++++++|++++.|||+++||||||++++||+|||||||+|+|+|++.|++++.++.+...
T Consensus 391 TilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~ 470 (1034)
T KOG0204|consen 391 TILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKS 470 (1034)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998877643322
Q ss_pred CcccHHHHHHHHHHHHccCCCcccccCCCC-ceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEE
Q 042091 472 SQMHSIVIYLLSEGIAQNTTGNVFVPKDGE-AVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVA 550 (1023)
Q Consensus 472 ~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msvi 550 (1023)
..+++.+.+++.++++.|++.+++.++.++ ..++.|+|+|+||+.|+.++|++++..|++.++++++||||.||+||++
T Consensus 471 ~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvv 550 (1034)
T KOG0204|consen 471 SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVV 550 (1034)
T ss_pred ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEE
Confidence 468899999999999999999999877664 7899999999999999999999999999999999999999999999999
Q ss_pred EeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccc---------cCC
Q 042091 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILD---------KWT 620 (1023)
Q Consensus 551 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~---------~~~ 620 (1023)
++.+++..++|||||+|.|+++|+.+++.+|+..+++++. +.+++.|+.||++|+||+|+|||++.. +++
T Consensus 551 i~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~ 630 (1034)
T KOG0204|consen 551 IKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEE 630 (1034)
T ss_pred EEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccc
Confidence 9988776239999999999999999999999999999988 899999999999999999999999421 235
Q ss_pred CCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHH
Q 042091 621 LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDK 700 (1023)
Q Consensus 621 ~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~ 700 (1023)
.++.+++++|++|++||+|||++++|+.|++|||.|.|+||||..||++||.+|||.+++. +..+++|++|++++++
T Consensus 631 ~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~e 707 (1034)
T KOG0204|consen 631 LPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQE 707 (1034)
T ss_pred cCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHH
Confidence 6789999999999999999999999999999999999999999999999999999998764 3689999999999999
Q ss_pred HHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHH
Q 042091 701 EREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 701 ~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
|++++.+++.|+||++|.||+.+|+.|+++|++||++|||+||+||||+||||+|||+.|||+|||+|||||+||||++|
T Consensus 708 e~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssI 787 (1034)
T KOG0204|consen 708 ERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSI 787 (1034)
T ss_pred HHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCC
Q 042091 781 VKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVG 860 (1023)
Q Consensus 781 ~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~ 860 (1023)
+++++|||++|.||+||+||||+.|+++++++|++++..+.+||+++|+||+|+|||+|++||||+|||++++|+|+|++
T Consensus 788 Vk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~G 867 (1034)
T KOG0204|consen 788 VKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVG 867 (1034)
T ss_pred HHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeec
Q 042091 861 RKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTG 940 (1023)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 940 (1023)
|++|+|++.||++++.|++||.++++++.|.|..+|+.+++. ......++|++||+||+||+||++|+|+.++.|+|++
T Consensus 868 R~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~-~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkg 946 (1034)
T KOG0204|consen 868 RTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPL-HSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKG 946 (1034)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCC-CCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHH
Confidence 999999999999999999999999999999999999866533 2356788999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhccccccc
Q 042091 941 VTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVRPFQRC 1017 (1023)
Q Consensus 941 ~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1017 (1023)
+++|++|++++.+++++|+++++|+|.+|++++|+|.+|++|+.++++.|++..++|++|.+..|...+.+.....+
T Consensus 947 i~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~~~~ 1023 (1034)
T KOG0204|consen 947 IFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGGSKF 1023 (1034)
T ss_pred HhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888776554443
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-156 Score=1334.93 Aligned_cols=876 Identities=32% Similarity=0.481 Sum_probs=762.1
Q ss_pred CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcc
Q 042091 92 IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEE 171 (1023)
Q Consensus 92 ~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~ 171 (1023)
..+++.+..+.+++++||+++ |+.+|++.||.|+++.....++|+.+++||.++...+|+++|++|+++.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~--ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------- 76 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSD--EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA-------- 76 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHH--HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------
Confidence 458899999999999999998 9999999999999999999999999999999999999999999999997
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~ 251 (1023)
.|-|+++|.+++++++.+..+|||++++++++|++..+ +.++|+|+|+.+.+++.||||||||.|+.||+||||.+|++
T Consensus 77 ~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p-~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVP-PMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCC-ccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 46678888888999999999999999999999999886 79999999999999999999999999999999999999999
Q ss_pred eCCeEEeeccccCCCceeccCC-------------CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCCh
Q 042091 252 GHSLAIDESSMTGESKIVRKDH-------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETP 318 (1023)
Q Consensus 252 g~~l~VDES~LTGES~pv~K~~-------------~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 318 (1023)
..++.||||+|||||.|+.|.. +.|++|+||.|..|.++++|++||.+|++|++.+.+.+.+.++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999953 346899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhh
Q 042091 319 LQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVA 398 (1023)
Q Consensus 319 lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~ 398 (1023)
||++++.+...+..+...+++.++++- .++..++-.. +..+.....+|.++ +++.|++
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~n-----ig~f~~p~~~----------g~~fk~~~~~f~Ia-------VsLAVAA 293 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLN-----IGHFLDPVHG----------GSWFKGALYYFKIA-------VSLAVAA 293 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhh-----hhhhcccccc----------ccchhchhhhhhHH-------HHHHHHh
Confidence 999999999998854444344333331 1222222111 11223478899999 9999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccC------------
Q 042091 399 VPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN------------ 466 (1023)
Q Consensus 399 iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~------------ 466 (1023)
||||||..++++++.|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+....
T Consensus 294 IPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty 373 (972)
T KOG0202|consen 294 IPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTY 373 (972)
T ss_pred ccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998643221
Q ss_pred -CCC----------CCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhc--------
Q 042091 467 -PPD----------DSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDR-------- 527 (1023)
Q Consensus 467 -~~~----------~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~-------- 527 (1023)
+.. +.....+.+.+++..+..||. +.+...+. +.++..|.|+|.||..++++.|+.-..
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNd-a~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~ 451 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCND-ATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEE 451 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhh-hhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccc
Confidence 111 011233455566655555554 33433322 455668999999999999998865422
Q ss_pred -------ccccccEEEEecCCCCCceEEEEEeecCC--eEEEEEeCchHHHHHhhccccccCC-ccccCCchH-HHHHHH
Q 042091 528 -------VRSETTVLHVFPFNSEKKRGGVAVKRINS--EVHVHWKGAAEMILASCTKYLDTDG-QLQSIDGDE-DFFKAA 596 (1023)
Q Consensus 528 -------~~~~~~il~~~~F~s~~k~msviv~~~~~--~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~~-~~~~~~ 596 (1023)
....++...++||+|+||+|+|.+..+.+ ++.+|+|||+|.|+++|+.++..+| ...|+++.. +.+.+.
T Consensus 452 ~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~ 531 (972)
T KOG0202|consen 452 ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILAN 531 (972)
T ss_pred cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHH
Confidence 11124566999999999999999986644 4889999999999999988877766 448999988 999999
Q ss_pred HHHHHhccchhhhhhhccccc------------cCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCH
Q 042091 597 VDEMAARSLRCVAIAYRFILD------------KWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNL 664 (1023)
Q Consensus 597 ~~~~a~~glr~l~~ayk~~~~------------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 664 (1023)
..+|+++|+|||++|+++... ++...|.||+|+|++|+.||||++++++|+.|+++||||+|+|||+.
T Consensus 532 ~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~ 611 (972)
T KOG0202|consen 532 VYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNK 611 (972)
T ss_pred HHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCH
Confidence 999999999999999997642 23456889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCH
Q 042091 665 QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDA 744 (1023)
Q Consensus 665 ~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~ 744 (1023)
.||++||+++|+.....+ -...+++|++++.++++++++...++.+|+|++|++|.+||+.||++|++|+|+|||+||+
T Consensus 612 ~TA~AI~r~iGi~~~~ed-~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDA 690 (972)
T KOG0202|consen 612 ETAEAIAREIGIFSEDED-VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDA 690 (972)
T ss_pred HHHHHHHHHhCCCcCCcc-ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccch
Confidence 999999999999876554 5668999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCch
Q 042091 745 PALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPL 824 (1023)
Q Consensus 745 ~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl 824 (1023)
||||.||||||||++||++||++||+||.||||++|+.+++|||.+|+||++|+.|+++.|+.++...++++.+..+.||
T Consensus 691 pALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL 770 (972)
T KOG0202|consen 691 PALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPL 770 (972)
T ss_pred hhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccc--ccc--
Q 042091 825 NAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH--LEG-- 900 (1023)
Q Consensus 825 ~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~-- 900 (1023)
+|+|+||+|++||.+||.+|+.|||+.|+|++|||++++++++..++.+++..|+|.+...+..+...++..+ +..
T Consensus 771 ~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~ 850 (972)
T KOG0202|consen 771 IPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQ 850 (972)
T ss_pred cchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhh
Confidence 9999999999999999999999999999999999999999999988888888888886544433322221100 000
Q ss_pred -------------cc-cccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHHH--HHH
Q 042091 901 -------------ER-RQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQIII--IEF 964 (1023)
Q Consensus 901 -------------~~-~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--v~~ 964 (1023)
.+ .........|+.|..||+...||.+++|+.++..+..++|.|+||++++++++++|+++ +++
T Consensus 851 ~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~ 930 (972)
T KOG0202|consen 851 LAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPP 930 (972)
T ss_pred hcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEech
Confidence 00 00111234589999999999999999999988777889999999999999999998765 799
Q ss_pred HHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 042091 965 LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPK 1003 (1023)
Q Consensus 965 ~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 1003 (1023)
++..|.+.||++.+|++.+.+.+..++++|++|++.|.+
T Consensus 931 l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 931 LQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNY 969 (972)
T ss_pred hhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999864
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.4e-144 Score=1364.81 Aligned_cols=886 Identities=49% Similarity=0.779 Sum_probs=774.3
Q ss_pred CHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cC
Q 042091 93 RVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIK-----TE 167 (1023)
Q Consensus 93 ~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~-----~~ 167 (1023)
.++++.+.|+++.++||+++.+|+++|+++||+|+++.++.+++|++++++|+++++++|++++++++++++. .+
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 5899999999999999994444999999999999999998899999999999999999999999999988743 23
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccE
Q 042091 168 GVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 168 ~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
+..+.|++++.++++++++.+++++++|+++++++++++...+.+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 44458999999888888889999999999999999998765557999999999999999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCC-CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHH
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKT-PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGV 326 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~-~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~ 326 (1023)
+|++|+.+.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++++++.+++ +++|+|++++++
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~ 281 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSEL 281 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHH
Confidence 9999977899999999999999998754 68999999999999999999999999999999988755 578999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHH
Q 042091 327 ATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLA 406 (1023)
Q Consensus 327 ~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~la 406 (1023)
+.++..++++++++++++++..++......... . . ......+...|..+ +++++++||||||++
T Consensus 282 ~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~---~----~--~~~~~~~~~~~~~a-------l~llv~~iP~~Lp~~ 345 (941)
T TIGR01517 282 AGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR---D----T--EEDAQTFLDHFIIA-------VTIVVVAVPEGLPLA 345 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc---c----c--chhhHHHHHHHHHH-------HHHHHhhCCCchHHH
Confidence 999999888888887776654332221100000 0 0 00112356667777 999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHH
Q 042091 407 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGI 486 (1023)
Q Consensus 407 v~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i 486 (1023)
++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|++++..+..++..+......+...+++..++
T Consensus 346 vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 425 (941)
T TIGR01517 346 VTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGI 425 (941)
T ss_pred HHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998765433322211112334555666777
Q ss_pred HccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCch
Q 042091 487 AQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAA 566 (1023)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~ 566 (1023)
++|+...... ++.+..+..|||+|.|+++++.+.|.+....+..+++++.+||+|++|+|+++++.+++++++++||||
T Consensus 426 ~~~s~~~~~~-~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~ 504 (941)
T TIGR01517 426 SLNSSSEEVV-DRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGAS 504 (941)
T ss_pred HhCCCCcccc-CCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECCh
Confidence 7776543211 112334678999999999999988877766666788899999999999999999977778999999999
Q ss_pred HHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc----CCCCCCCcEEEeeeeccCCCcccH
Q 042091 567 EMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK----WTLPEEELILLAIVGIKDPCRPGV 642 (1023)
Q Consensus 567 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~----~~~~e~~l~~lG~i~~~D~lr~~~ 642 (1023)
|.|+++|+.+...+|...++++..+++++.+++++++|+|++++|||.++.+ ++..|++++|+|+++++||+|+++
T Consensus 505 e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~ 584 (941)
T TIGR01517 505 EIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGV 584 (941)
T ss_pred HHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhH
Confidence 9999999987766777777776337889999999999999999999987532 233478999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHH
Q 042091 643 KDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLL 722 (1023)
Q Consensus 643 ~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~ 722 (1023)
+++|+.|+++||+++|+|||++.||.++|++|||.++. ..+++|++++.+++++++++++++.||||++|+||.+
T Consensus 585 ~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~-----~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~ 659 (941)
T TIGR01517 585 REAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG-----GLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQL 659 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC-----ceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999998643 3799999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHH
Q 042091 723 LVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802 (1023)
Q Consensus 723 iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 802 (1023)
+|+.+|++|++|+|+|||+||+||||+||||||||++|+|+|+++||+++++|+|+++++++++||++|+||+|+++|++
T Consensus 660 iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l 739 (941)
T TIGR01517 660 LVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQL 739 (941)
T ss_pred HHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHH
Q 042091 803 TVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQV 882 (1023)
Q Consensus 803 ~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1023)
++|+..+++.+++.++.++.|++++|++|+|+++|.+|+++|++|+|++++|++||++++++++++.||+++++++++++
T Consensus 740 ~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~ 819 (941)
T TIGR01517 740 TVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQL 819 (941)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccccccc--cccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH
Q 042091 883 TVLLVLNFKGTSILHLEGER--RQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII 960 (1023)
Q Consensus 883 ~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 960 (1023)
++.+++++.+..++...+.. ..+.....+|++|++|+++|+||.+++|+.+..++|+++++|++++.++++++++|++
T Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~ 899 (941)
T TIGR01517 820 VVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVI 899 (941)
T ss_pred HHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHH
Confidence 88877766554333222210 0112356789999999999999999999977557888999999999999999999999
Q ss_pred HHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC
Q 042091 961 IIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 1001 (1023)
Q Consensus 961 ~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 1001 (1023)
++++++.+|++.|+++.+|+++++++++.+++.++.|++|+
T Consensus 900 ~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 900 IVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999974
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=8.7e-141 Score=1329.97 Aligned_cols=866 Identities=27% Similarity=0.410 Sum_probs=733.6
Q ss_pred hcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 042091 90 QVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGV 169 (1023)
Q Consensus 90 ~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~ 169 (1023)
|...++++.+.|+++..+||+++ |+.+|+++||+|+++.++.+++|+.+++||.++++++|+++++++++.+
T Consensus 8 ~~~~~~~v~~~l~t~~~~GLs~~--ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------ 79 (1053)
T TIGR01523 8 FSDIADEAAEFIGTSIPEGLTHD--EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------ 79 (1053)
T ss_pred hhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh------
Confidence 45568899999999988999998 8999999999999999888999999999999999999999999999886
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEE
Q 042091 170 EEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 170 ~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgil 249 (1023)
.|++++.|+++++++++++.++++++++++++|+++.+ .+++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 --~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~-~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLAS-PMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred --hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 79999999999999999999999999999999998865 689999999999999999999999999999999999999
Q ss_pred EeeCCeEEeeccccCCCceeccCCC--------------CCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC-
Q 042091 250 VTGHSLAIDESSMTGESKIVRKDHK--------------TPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG- 314 (1023)
Q Consensus 250 l~g~~l~VDES~LTGES~pv~K~~~--------------~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~- 314 (1023)
+++++|.||||+|||||.||.|.+. .|++|+||.|.+|.++++|++||.+|++|+|.+++.+...
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9999999999999999999999642 3689999999999999999999999999999998864321
Q ss_pred ----------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 042091 315 ----------------------------------EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGS 360 (1023)
Q Consensus 315 ----------------------------------~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~ 360 (1023)
.+||||+++++++.+++.++++++++++++... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~--------- 304 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---D--------- 304 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h---------
Confidence 249999999999999888887777666553211 0
Q ss_pred cccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceee
Q 042091 361 SAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 440 (1023)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I 440 (1023)
.....+..+ ++++++++|+|||+.++++++++++||++++++||+++++|+||++|+|
T Consensus 305 ---------------~~~~~~~~a-------v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvI 362 (1053)
T TIGR01523 305 ---------------VDKEVAIYA-------ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDI 362 (1053)
T ss_pred ---------------hhHHHHHHH-------HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEE
Confidence 012344456 8899999999999999999999999999999999999999999999999
Q ss_pred eeCCccccccCceEEEEEEeCCc-c---------cCCC-CC---------------------C--------C------c-
Q 042091 441 CSDKTGTLTLNEMTVVEAFIGRK-K---------INPP-DD---------------------S--------S------Q- 473 (1023)
Q Consensus 441 ~~DKTGTLT~n~m~v~~~~~~~~-~---------~~~~-~~---------------------~--------~------~- 473 (1023)
|+|||||||+|+|+|+++|..+. . |.+. .+ . . .
T Consensus 363 CsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1053)
T TIGR01523 363 CSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDI 442 (1053)
T ss_pred EecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999987541 1 1110 00 0 0 0
Q ss_pred ccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChh------cc-------------------
Q 042091 474 MHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFD------RV------------------- 528 (1023)
Q Consensus 474 ~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~------~~------------------- 528 (1023)
.++...+++..+..||+ +.+..+++++.+...|||+|.||+.++.+.|++.. ..
T Consensus 443 ~~~~~~~ll~~~~lcn~-a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1053)
T TIGR01523 443 DMDLFIKLLETAALANI-ATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPG 521 (1053)
T ss_pred ccHHHHHHHHHHHhccC-CeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccc
Confidence 01123345544444443 33322111233456799999999999998886421 11
Q ss_pred cccccEEEEecCCCCCceEEEEEeecCC-eEEEEEeCchHHHHHhhccccccCC-ccccCCchH-HHHHHHHHHHHhccc
Q 042091 529 RSETTVLHVFPFNSEKKRGGVAVKRINS-EVHVHWKGAAEMILASCTKYLDTDG-QLQSIDGDE-DFFKAAVDEMAARSL 605 (1023)
Q Consensus 529 ~~~~~il~~~~F~s~~k~msviv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~~-~~~~~~~~~~a~~gl 605 (1023)
+..+++++++||+|+||||+++++.+++ .+++|+|||||.|+++|+.+...+| ...+++++. +++.+.+++|+++|+
T Consensus 522 ~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~Gl 601 (1053)
T TIGR01523 522 SAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGL 601 (1053)
T ss_pred ccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCC
Confidence 2347899999999999999999986544 5889999999999999997655444 456788776 889999999999999
Q ss_pred hhhhhhhcccccc-------------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHH
Q 042091 606 RCVAIAYRFILDK-------------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL 672 (1023)
Q Consensus 606 r~l~~ayk~~~~~-------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 672 (1023)
||+++|||.++++ .+..|+|++|+|+++++||+|++++++|+.|+++||+|+|+|||++.||.+||+
T Consensus 602 RvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~ 681 (1053)
T TIGR01523 602 RVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQ 681 (1053)
T ss_pred eEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 9999999987532 123578999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCC-----CCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 042091 673 ECGILGSDAE-----ANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747 (1023)
Q Consensus 673 ~~gi~~~~~~-----~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL 747 (1023)
++||.+.... .....+++|++++.++++++++...++.||||++|+||.++|+.+|++|++|+|+|||+||+|||
T Consensus 682 ~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaL 761 (1053)
T TIGR01523 682 EVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSL 761 (1053)
T ss_pred HcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHH
Confidence 9999754211 11358999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhc---C--CC
Q 042091 748 HEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISS---G--DV 822 (1023)
Q Consensus 748 ~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~---~--~~ 822 (1023)
++||||||||++|+++|+++||+++++|+|++|++++++||++|+||+|++.|.++.|+..+++.+++.++. | +.
T Consensus 762 k~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~ 841 (1053)
T TIGR01523 762 KMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVF 841 (1053)
T ss_pred HhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcC
Confidence 999999999989999999999999999999999999999999999999999999999999999999888874 2 47
Q ss_pred chhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccc---cc
Q 042091 823 PLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH---LE 899 (1023)
Q Consensus 823 pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~ 899 (1023)
||+++|+||+|+++|.+|+++|+.|||++++|+|||+.++++++++.+++.++..+++++++.+..+++..+.+. ..
T Consensus 842 Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 921 (1053)
T TIGR01523 842 PLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLG 921 (1053)
T ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999999999887766554432111110 00
Q ss_pred cc-----ccc-cccccchhHHHHHHHHHHHHhhcccCCCCcccee---------------ecCcchHHHHHHHHHHHHHH
Q 042091 900 GE-----RRQ-HASDVKNTMIFNAFVLSQIFNEFNARKPDEINVF---------------TGVTKNYLFMGIIGITCVLQ 958 (1023)
Q Consensus 900 ~~-----~~~-~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~---------------~~~~~n~~~~~~~~~~~~~~ 958 (1023)
.. ... .....++|+.|.+++++|+++.+++|+.+...+. .+.++|++++++++++++++
T Consensus 922 ~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~ 1001 (1053)
T TIGR01523 922 HDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA 1001 (1053)
T ss_pred ccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH
Confidence 00 000 1234678999999999999999999987533221 23679999888888888887
Q ss_pred HHH--HHHHHH-cccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 959 III--IEFLGK-FTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 959 ~~~--v~~~~~-~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+++ +|+++. +|++.|+++ +|+++++++++.++++|++|+++|+
T Consensus 1002 ~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~ 1047 (1053)
T TIGR01523 1002 FPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRR 1047 (1053)
T ss_pred HHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554 688985 999999997 8999999999999999999998753
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1e-136 Score=1287.82 Aligned_cols=842 Identities=33% Similarity=0.510 Sum_probs=739.0
Q ss_pred hcCCHHHHHHHhCCCcCCCCC-CCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccC
Q 042091 90 QVIRVKGLSELLKTNLEKGIS-GDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAW-QDLTLIILIVAAIASLALGIKTE 167 (1023)
Q Consensus 90 ~~~~v~~l~~~l~~~~~~GLs-~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~-~~~~~~~ll~~ails~~~~~~~~ 167 (1023)
|...++++.+.|+++..+||+ ++ |+.+|+++||.|+++.++.+++|+.++++| +++++++|+++++++++.+
T Consensus 5 ~~~~~~~v~~~l~t~~~~GLs~~~--ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 5 CELSVEETCSKLQTDLQNGLNSSQ--EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred hhCCHHHHHHHhCcCcccCCCcHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 445688999999999989999 55 899999999999999888899999999999 9999999999999999887
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccE
Q 042091 168 GVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 168 ~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
.|.+++.+++++++++.++.+++|++++.+++|.+..+ .+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~-~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg 153 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVP-PECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADL 153 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeE
Confidence 68899888888888889999999999999999998765 6899999999999999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCC-------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKT-------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~-------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 314 (1023)
+|++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++.+.+.++..
T Consensus 154 ~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 233 (884)
T TIGR01522 154 RIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233 (884)
T ss_pred EEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCC
Confidence 9999987899999999999999998753 589999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhh
Q 042091 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394 (1023)
Q Consensus 315 ~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~i 394 (1023)
+++|+|+.+++++.++++++++++++++++. ++.+. ++...+..+ +++
T Consensus 234 ~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~~----------------------~~~~~~~~~-------v~l 281 (884)
T TIGR01522 234 PKTPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQGK----------------------DWLEMFTIS-------VSL 281 (884)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcC----------------------CHHHHHHHH-------HHH
Confidence 8999999999999998877665554443332 21111 145667777 999
Q ss_pred hhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccC--------
Q 042091 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKIN-------- 466 (1023)
Q Consensus 395 lv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------- 466 (1023)
++++|||+||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+....
T Consensus 282 lv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~ 361 (884)
T TIGR01522 282 AVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLN 361 (884)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccC
Confidence 999999999999999999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCC--------CCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEe
Q 042091 467 PPDD--------SSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVF 538 (1023)
Q Consensus 467 ~~~~--------~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~ 538 (1023)
..+. ....++...+++..+..||+. .. ..+ ..+..|||+|.|+++++.+.|.+ ..+..++.++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~-~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~ 434 (884)
T TIGR01522 362 QFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA-KF-RNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEV 434 (884)
T ss_pred CCCcccccccccccccCHHHHHHHHHHhhhCCC-ee-cCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEe
Confidence 0000 000122334455444444433 22 111 12346899999999999887753 334467889999
Q ss_pred cCCCCCceEEEEEeec-CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccc
Q 042091 539 PFNSEKKRGGVAVKRI-NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFIL 616 (1023)
Q Consensus 539 ~F~s~~k~msviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~ 616 (1023)
||+|++|+|+++++.. ++++++++|||||.|+..|++++..+|...+++++. +++++.+++++++|+|++++|||.+
T Consensus 435 pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~- 513 (884)
T TIGR01522 435 PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE- 513 (884)
T ss_pred CCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-
Confidence 9999999999998764 567889999999999999998887677777787765 7888999999999999999999865
Q ss_pred ccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc
Q 042091 617 DKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA 696 (1023)
Q Consensus 617 ~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~ 696 (1023)
+.+++|+|+++++||+|||++++|+.|+++|++++|+|||++.||.++|+++||.... ..+++|++++.
T Consensus 514 ------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~-----~~~v~g~~l~~ 582 (884)
T TIGR01522 514 ------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT-----SQSVSGEKLDA 582 (884)
T ss_pred ------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----CceeEhHHhHh
Confidence 4689999999999999999999999999999999999999999999999999998643 35789999999
Q ss_pred cCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCC
Q 042091 697 LSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDN 776 (1023)
Q Consensus 697 l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~ 776 (1023)
++++++++.+.++.||||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||.+|+++++++||+++++|+
T Consensus 583 ~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~ 662 (884)
T TIGR01522 583 MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDD 662 (884)
T ss_pred CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999997799999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 042091 777 FASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHR 856 (1023)
Q Consensus 777 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~ 856 (1023)
|+.+++++++||++|+||+|++.|+++.|+..+.+.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|++
T Consensus 663 ~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~ 742 (884)
T TIGR01522 663 FATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRK 742 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccc
Q 042091 857 LPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEIN 936 (1023)
Q Consensus 857 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~ 936 (1023)
||++++++++++.||+.++++++++.++.+++++.... .+ .....++|++|++|+++|+||.+++|+. +.+
T Consensus 743 ~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~----~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~ 813 (884)
T TIGR01522 743 PPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ----DG----VITARDTTMTFTCFVFFDMFNALACRSQ-TKS 813 (884)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc----CC----cchhhHHHHHHHHHHHHHHHHHHHHccC-Ccc
Confidence 99999999999999999999999988776555443211 01 1124568999999999999999999996 456
Q ss_pred eee-cCcchHHHHHHHHHHHHHHHHHH--HHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 937 VFT-GVTKNYLFMGIIGITCVLQIIII--EFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 937 ~~~-~~~~n~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+|+ ++++|++++.++++++++|++++ |+++.+|++.|+++.+|+++++++++.+++.|++|+++|.
T Consensus 814 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 814 VFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred ccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 776 78899999999999999997664 6899999999999999999999999999999999998764
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.3e-136 Score=1297.08 Aligned_cols=878 Identities=26% Similarity=0.356 Sum_probs=742.4
Q ss_pred hhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 042091 87 AHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT 166 (1023)
Q Consensus 87 ~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~ 166 (1023)
-..|....+++.+.|+++..+||+++ |+.+|+++||+|+++.++.+++|+.++++|.++++++|+++++++++.....
T Consensus 15 ~~~~~~~~~~~~~~l~t~~~~GLs~~--e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 15 MDDHKLSLDELERKYGTDLSKGLSAA--RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred CCchhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 34566779999999999998999998 8999999999999998888999999999999999999999999977653321
Q ss_pred C-----CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCC
Q 042091 167 E-----GVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGD 241 (1023)
Q Consensus 167 ~-----~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd 241 (1023)
+ .....|++++.+++++++..+++.++++++++..+++++..+ .+++|+|||++++|+++||||||+|.|++||
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~-~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVP-QQALVIRDGEKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEeeHHHCCCCCEEEECCCC
Confidence 1 122478999888888888888899999999999999988765 6899999999999999999999999999999
Q ss_pred ccCccEEEEeeCCeEEeeccccCCCceeccCCCC---------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccC
Q 042091 242 QVPADGVLVTGHSLAIDESSMTGESKIVRKDHKT---------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISED 312 (1023)
Q Consensus 242 ~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~---------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 312 (1023)
+|||||++++|++|.||||+|||||.|+.|.+++ |++|+||.|.+|.+.++|++||.+|++|++.+.+.+.
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 9999999999988899999999999999997753 4799999999999999999999999999999998887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhh
Q 042091 313 NGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQV 392 (1023)
Q Consensus 313 ~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 392 (1023)
+.+++|+|+++++++..+..+++++++++++++.. .+. .+...+..+ +
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~-------i 299 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFL-------I 299 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHH-------H
Confidence 78899999999999999988877777666554422 111 034555666 8
Q ss_pred hhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCC--
Q 042091 393 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDD-- 470 (1023)
Q Consensus 393 ~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-- 470 (1023)
++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++++++..+.....
T Consensus 300 ~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 379 (997)
T TIGR01106 300 GIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED 379 (997)
T ss_pred HHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccC
Confidence 899999999999999999999999999999999999999999999999999999999999999999987654432110
Q ss_pred ----CCcccHHHHHHHHHHHHccCCCcccccCCCC----ceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCC
Q 042091 471 ----SSQMHSIVIYLLSEGIAQNTTGNVFVPKDGE----AVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNS 542 (1023)
Q Consensus 471 ----~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s 542 (1023)
.........+.+...++.|+++... .++++ ..+..|||+|.||++++.+.+.+....+..+++++.+||+|
T Consensus 380 ~~~~~~~~~~~~~~~ll~~~alcn~~~~~-~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s 458 (997)
T TIGR01106 380 QSGVSFDKSSATWLALSRIAGLCNRAVFK-AGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNS 458 (997)
T ss_pred CCCccCCcccHHHHHHHHHHHHcCCCeec-cccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCC
Confidence 0011112232333445555544331 11111 23567999999999999877666666777889999999999
Q ss_pred CCceEEEEEeec---CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccccc
Q 042091 543 EKKRGGVAVKRI---NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDK 618 (1023)
Q Consensus 543 ~~k~msviv~~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~ 618 (1023)
+||+|+++++.. ++++++++|||||.|+++|++++ .+|...+++++. +.+++.+++|+++|+||+++|||.+.++
T Consensus 459 ~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~ 537 (997)
T TIGR01106 459 TNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537 (997)
T ss_pred CCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcc
Confidence 999999987643 34688999999999999999876 567778888876 8899999999999999999999987432
Q ss_pred C------------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC----
Q 042091 619 W------------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---- 682 (1023)
Q Consensus 619 ~------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---- 682 (1023)
+ +..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++|+.+++.+
T Consensus 538 ~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~ 617 (997)
T TIGR01106 538 QFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVED 617 (997)
T ss_pred cccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhh
Confidence 1 123789999999999999999999999999999999999999999999999999999754321
Q ss_pred ---------------CCCCeeeechhhhccCHHHHHHHHhhce--EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHH
Q 042091 683 ---------------ANDPNIIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAP 745 (1023)
Q Consensus 683 ---------------~~~~~vi~g~~~~~l~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~ 745 (1023)
.+...+++|++++.++++++++.+.++. ||||++|+||.++|+.+|++|++|+|+|||+||+|
T Consensus 618 i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~p 697 (997)
T TIGR01106 618 IAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSP 697 (997)
T ss_pred hhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHH
Confidence 1124799999999999999999998874 99999999999999999999999999999999999
Q ss_pred HhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q 042091 746 ALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLN 825 (1023)
Q Consensus 746 aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~ 825 (1023)
|||+||||||||.+|+|+||++||++++||+|+++++++++||++|.|++|+++|+++.|+..+++.+++.++..++||+
T Consensus 698 aLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~ 777 (997)
T TIGR01106 698 ALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLG 777 (997)
T ss_pred HHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhH
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCC-CCCCcchHHHHHH-HHHHHHHHHHHHHHHHhhhc--------c
Q 042091 826 AVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGR-KEPLITNIMWRNL-IVQALYQVTVLLVLNFKGTS--------I 895 (1023)
Q Consensus 826 ~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~--------~ 895 (1023)
++|+||+|+++|++|+++|++|||++++|+|||+.+ ..+++++.+|..+ +..+++++++.++.++.... .
T Consensus 778 ~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 857 (997)
T TIGR01106 778 TITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHL 857 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc
Confidence 999999999999999999999999999999999984 6899998776554 44576776555544332211 1
Q ss_pred cccc--cc-----cc--cc-----------ccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHH
Q 042091 896 LHLE--GE-----RR--QH-----------ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITC 955 (1023)
Q Consensus 896 ~~~~--~~-----~~--~~-----------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~ 955 (1023)
+.+. .. +. .. .....+|++|++++++|+||.+++|+. +.++|++.++|++++.++++.+
T Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~ 936 (997)
T TIGR01106 858 VGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEET 936 (997)
T ss_pred cccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHH
Confidence 1110 00 00 00 011568999999999999999999995 4577765589999888888777
Q ss_pred HHHHH--HHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042091 956 VLQII--IIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVP 1002 (1023)
Q Consensus 956 ~~~~~--~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 1002 (1023)
+++++ ++|+++.+|++.|+++.+|+++++++++.++++++.|++.|+
T Consensus 937 ~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 937 ALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77654 367789999999999999999999999999999999998764
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-135 Score=1269.20 Aligned_cols=852 Identities=35% Similarity=0.530 Sum_probs=731.6
Q ss_pred HHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccch
Q 042091 96 GLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYD 175 (1023)
Q Consensus 96 ~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~ 175 (1023)
.+...+.++..+||+++ ++.+|++.||.|+++..+..++|..++.+|.+++..+|+++++++++.+.+..+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~--e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEE--EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHH--HHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 56677778888999996 8999999999999999989999999999999999999999999999988432110 44
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCe
Q 042091 176 GASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSL 255 (1023)
Q Consensus 176 ~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l 255 (1023)
...++..++++.++..++++++++..++++++.+ .+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~-~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSS-PKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 4567777788888999999999999999998875 799999999999999999999999999999999999999999988
Q ss_pred EEeeccccCCCceeccCC-------------CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHH
Q 042091 256 AIDESSMTGESKIVRKDH-------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVR 322 (1023)
Q Consensus 256 ~VDES~LTGES~pv~K~~-------------~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~ 322 (1023)
+||||+|||||.|+.|.+ .+|++|+||.|.+|.+.++|++||.+|+.|++.+.+......+||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 999999999999999973 3678999999999999999999999999999999999876789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCc
Q 042091 323 LNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEG 402 (1023)
Q Consensus 323 l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~ 402 (1023)
++++..++..++++++++++++.. +.++ + ++...|..+ ++++++++|+|
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~---~~~~---~------------------~~~~~~~~~-------v~l~va~IPeg 313 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGL---FRGG---N------------------GLLESFLTA-------LALAVAAVPEG 313 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhcC---c------------------cHHHHHHHH-------HHHHHhccccc
Confidence 999999999998888888777652 2211 0 045677777 99999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHH
Q 042091 403 LPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLL 482 (1023)
Q Consensus 403 L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll 482 (1023)
||+.++++++.++++|+++++++|+++++|+||++|+||||||||||+|+|+|++++..+...+.........+...+++
T Consensus 314 Lp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (917)
T COG0474 314 LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFL 393 (917)
T ss_pred hHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998411111111111122233333
Q ss_pred HHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCC--ChhcccccccEEEEecCCCCCceEEEEEeecCCeEEE
Q 042091 483 SEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGM--KFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHV 560 (1023)
Q Consensus 483 ~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~ 560 (1023)
. .++.||+.... .+ + ++..|||+|.||++++.+.|. +....+..+++++++||+|+||||+++++.+++++++
T Consensus 394 ~-~~~lc~~~~~~--~~-~-~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~ 468 (917)
T COG0474 394 L-AAALCNSVTPE--KN-G-WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYIL 468 (917)
T ss_pred H-HHHhcCccccc--cc-C-ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEE
Confidence 3 34444443331 11 2 678999999999999999998 7777777889999999999999999999977777999
Q ss_pred EEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC-----CCCCCCcEEEeeeec
Q 042091 561 HWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW-----TLPEEELILLAIVGI 634 (1023)
Q Consensus 561 ~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~-----~~~e~~l~~lG~i~~ 634 (1023)
++|||||.|+++|+.. +...+++++. +.+++..++|+++|||++++|||.++.+. +..|+|++|+|+++|
T Consensus 469 ~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~ 544 (917)
T COG0474 469 FVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGI 544 (917)
T ss_pred EEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhc
Confidence 9999999999999976 5566777777 89999999999999999999999775432 467899999999999
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
+||||++++++|+.|++|||++||+||||+.||++||++||+...... ..+++|.+++.++++|+.+.++++.||||
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~VfAR 621 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSVFAR 621 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcEEEE
Confidence 999999999999999999999999999999999999999999864321 57999999999999999999999999999
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhh
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANI 794 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i 794 (1023)
++|+||.++|+.||++|++|+|+|||+||+||||+||||||||++|+|+||++||+++.+++|..++.+++|||++|.|+
T Consensus 622 vsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni 701 (917)
T COG0474 622 VSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNI 701 (917)
T ss_pred cCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHH
Q 042091 795 QKFIQFQLTVNVAALLINVVAAISSGD-VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRN 873 (1023)
Q Consensus 795 ~~~i~~~l~~nv~~i~~~~~~~~~~~~-~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~ 873 (1023)
+|++.|.+++|+..+++.+++.+++.+ .||+++|++|+|+++|.+|+++|+.++|+.+.|++||++++++++++..++.
T Consensus 702 ~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~ 781 (917)
T COG0474 702 KKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWR 781 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHH
Confidence 999999999999999999999888877 8999999999999999999999999999999999999999999999888878
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccccccc-ccccchhHHHHHHHHHHHHhhcccCCCCccceee-cCcchHHHHHHH
Q 042091 874 LIVQALYQVTVLLVLNFKGTSILHLEGERRQH-ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFT-GVTKNYLFMGII 951 (1023)
Q Consensus 874 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~ 951 (1023)
++++..++++++.++.|............... .....+|+.|+.++++|.++.+.+|.... +++. +++.|+.+++++
T Consensus 782 ~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~~ 860 (917)
T COG0474 782 FILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGR-PFLSSLLFSNKYLWLAL 860 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-chhhcccccCHHHHHHH
Confidence 67776666666665554433322211110011 14667899999999999999999998653 4444 568999999888
Q ss_pred HHHHHHHHHH--HHHHH-HcccCCCCCHHHHHHHHHHHHHH--HHHHHHhhh
Q 042091 952 GITCVLQIII--IEFLG-KFTKTVKLDWKLWLASIGIGLFS--WPLAVLGKM 998 (1023)
Q Consensus 952 ~~~~~~~~~~--v~~~~-~~~~~~~l~~~~w~~~~~~~~~~--~~~~~~~k~ 998 (1023)
+++.++++++ +++.. ..|...+++...|++++++.... +...+..|.
T Consensus 861 ~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 861 LVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877665 35566 68999999999999998887433 344444444
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=7.3e-132 Score=1236.66 Aligned_cols=825 Identities=24% Similarity=0.302 Sum_probs=696.6
Q ss_pred hhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Q 042091 89 AQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKT-- 166 (1023)
Q Consensus 89 ~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~-- 166 (1023)
.|....+++.+.|+++ .+|||++ |+++|+++||+|+++.++.+++|+.++++|++++.++|+++++++++.+.+.
T Consensus 27 ~~~~~~~~v~~~l~~~-~~GLs~~--ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~ 103 (903)
T PRK15122 27 EAANSLEETLANLNTH-RQGLTEE--DAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL 103 (903)
T ss_pred HHhCCHHHHHHHhCCC-CCCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445578899999999 4899998 8999999999999998888999999999999999999999999999887542
Q ss_pred -CCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEEC------CEEEEEEeccceeccEEEecC
Q 042091 167 -EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRG------GKAVKISIFDVVVGEIVPLRI 239 (1023)
Q Consensus 167 -~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~I~~~dLv~GDIV~l~~ 239 (1023)
.+....|.+++.|++++++..+++.+++++++++.++|.+..+ ..++|+|| |++++|+++||||||+|.|++
T Consensus 104 ~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~-~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 104 RRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR-TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred cCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 1222368999989888999999999999999999999998875 68999999 489999999999999999999
Q ss_pred CCccCccEEEEeeCCeEEeeccccCCCceeccCC--C--------------------CCeeeccceEeecceeEEEEEEe
Q 042091 240 GDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH--K--------------------TPFLMSGCKVADGVGTMMVTGVG 297 (1023)
Q Consensus 240 Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~--~--------------------~~~l~aGt~v~~G~~~~~V~~tG 297 (1023)
||+|||||+|++|+++.||||+|||||.|+.|.+ + .+++|+||.|.+|+++++|++||
T Consensus 183 Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG 262 (903)
T PRK15122 183 GDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATG 262 (903)
T ss_pred CCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEec
Confidence 9999999999999989999999999999999974 1 26799999999999999999999
Q ss_pred cccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHH
Q 042091 298 INTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGV 377 (1023)
Q Consensus 298 ~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (1023)
.+|++|++.+++.+ ...++|+|+++++++.++..+++.++.+++++... .. . ++
T Consensus 263 ~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~---~~---~-------------------~~ 316 (903)
T PRK15122 263 SRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF---TK---G-------------------DW 316 (903)
T ss_pred cccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---cc---C-------------------CH
Confidence 99999999999877 56789999999999998887766665544433211 11 0 14
Q ss_pred HHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEE
Q 042091 378 IKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE 457 (1023)
Q Consensus 378 ~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~ 457 (1023)
...+..+ +++++++|||+||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+
T Consensus 317 ~~~l~~a-------isl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~ 389 (903)
T PRK15122 317 LEALLFA-------LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEH 389 (903)
T ss_pred HHHHHHH-------HHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEE
Confidence 5667777 999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEE
Q 042091 458 AFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHV 537 (1023)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~ 537 (1023)
++..+. . ..+ +++..+.. |+.. + ..++||+|.|+++++.+.+.. .....++.+++
T Consensus 390 ~~~~~~-~--------~~~---~~l~~a~l-~s~~-----~-----~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~ 444 (903)
T PRK15122 390 HLDVSG-R--------KDE---RVLQLAWL-NSFH-----Q-----SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDE 444 (903)
T ss_pred EEcCCC-C--------ChH---HHHHHHHH-hCCC-----C-----CCCCChHHHHHHHHHHHcCch--hhhhcCceEEE
Confidence 864221 0 011 22222222 2110 0 126899999999999876643 22345778899
Q ss_pred ecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccc
Q 042091 538 FPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFIL 616 (1023)
Q Consensus 538 ~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~ 616 (1023)
+||++.+|+|+++++..++++++++|||||.|+++|+++. .+|...+++++. +++.+.+++++.+|+|++++|||.++
T Consensus 445 ~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~ 523 (903)
T PRK15122 445 LPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIP 523 (903)
T ss_pred eeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccC
Confidence 9999999999999987677788999999999999999765 356667787766 78889999999999999999999875
Q ss_pred ccC------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 617 DKW------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 617 ~~~------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
.+. +..|+|++|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||+++||.. ..+++
T Consensus 524 ~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~ 596 (903)
T PRK15122 524 GGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLL 596 (903)
T ss_pred ccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccc
Confidence 422 12577999999999999999999999999999999999999999999999999999963 25899
Q ss_pred chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 691 g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
|++++.++++++++.++++.||||++|+||.++|+.||++|++|+|+|||+||+||||+|||||||| +|+|+||++||+
T Consensus 597 G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADi 675 (903)
T PRK15122 597 GTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADI 675 (903)
T ss_pred hHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCC
Q 042091 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPT 850 (1023)
Q Consensus 771 il~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~ 850 (1023)
+++||||++|++++++||++|+||+|++.|.++.|+..++..+++.++..+.|++|+|+||+|+++|. |+++|++|||+
T Consensus 676 VLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~ 754 (903)
T PRK15122 676 ILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMD 754 (903)
T ss_pred EEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCC
Confidence 99999999999999999999999999999999999999888888777777789999999999999995 89999999999
Q ss_pred ccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccC
Q 042091 851 DHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNAR 930 (1023)
Q Consensus 851 ~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r 930 (1023)
+++| |||++++++++++.+++..+..+++..+. +++.++.. .. +. .......+|..|.+++++|+++.+++|
T Consensus 755 ~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~---~~-~~--~~~~~~~~t~~f~~l~~~q~~~~~~~R 826 (903)
T PRK15122 755 KEFL-RKPRKWDAKNIGRFMLWIGPTSSIFDITT-FALMWFVF---AA-NS--VEMQALFQSGWFIEGLLSQTLVVHMLR 826 (903)
T ss_pred Hhhc-CCCCCCChhhhHHHHHHHHHHHHHHHHHH-HHHHHHHh---cc-Cc--HhhhhhhHHHHHHHHHHHHHHHHHhhC
Confidence 9999 99999999999998875333333332222 22222111 11 10 000112467889999999999999999
Q ss_pred CCCccceeecCcchHHHHHHHHHHHHHHHH--HHHH--HHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 042091 931 KPDEINVFTGVTKNYLFMGIIGITCVLQII--IIEF--LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKM 998 (1023)
Q Consensus 931 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~v~~--~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~ 998 (1023)
+.+. ++ |+|++.+..++++++++++ ++|+ ++.+|++.|+++.+|+++++++++.+++.++.|.
T Consensus 827 ~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~ 893 (903)
T PRK15122 827 TQKI-PF----IQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKR 893 (903)
T ss_pred cCCC-Cc----CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8642 33 4455444444455555543 4565 8999999999999999999999999999988884
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.7e-131 Score=1239.99 Aligned_cols=835 Identities=31% Similarity=0.468 Sum_probs=711.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE
Q 042091 140 LWEAWQDLTLIILIVAAIASLALGIKTEGVE--EGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR 217 (1023)
Q Consensus 140 l~~~~~~~~~~~ll~~ails~~~~~~~~~~~--~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R 217 (1023)
+++||+++++++|++++++|+++++..++.. ..|++++.|+++++++..++.++++++++.+++|.+..+ .+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~-~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYES-EHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceEEEE
Confidence 4689999999999999999999987653322 479999999999999999999999999999999988764 6899999
Q ss_pred CCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCC------------CCeeeccceEe
Q 042091 218 GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK------------TPFLMSGCKVA 285 (1023)
Q Consensus 218 ~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~------------~~~l~aGt~v~ 285 (1023)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|.++ ++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999764 27899999999
Q ss_pred ecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccc
Q 042091 286 DGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVK 365 (1023)
Q Consensus 286 ~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (1023)
+|.++++|++||.+|++|++.+++.+.+.+++|+|+++++++.+++.+.+++++++++++..++.. +...
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~-----~~~~----- 229 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND-----PALG----- 229 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cccc-----
Confidence 999999999999999999999999888888999999999999999887777777666554332210 0000
Q ss_pred ccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCc
Q 042091 366 GRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKT 445 (1023)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKT 445 (1023)
...+..+...+..+ +++++++|||+||+++++++++++++|+++|+++|+++++|+||++|+||||||
T Consensus 230 -----~~~~~~~~~~~~~~-------i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKT 297 (917)
T TIGR01116 230 -----GGWIQGAIYYFKIA-------VALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKT 297 (917)
T ss_pred -----chhHHHHHHHHHHH-------HhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCC
Confidence 01112345556666 899999999999999999999999999999999999999999999999999999
Q ss_pred cccccCceEEEEEEeCCcc-------------cCCCCCC-C------cccHHHHHHHHHHHHccCCCcccccCCCCceee
Q 042091 446 GTLTLNEMTVVEAFIGRKK-------------INPPDDS-S------QMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEV 505 (1023)
Q Consensus 446 GTLT~n~m~v~~~~~~~~~-------------~~~~~~~-~------~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~ 505 (1023)
||||+|+|+|.+++..+.. +.+.+.. . .......+.+..+.+.|++.....+++++....
T Consensus 298 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~ 377 (917)
T TIGR01116 298 GTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK 377 (917)
T ss_pred ccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee
Confidence 9999999999999876421 1110000 0 001112233334445555544422222222345
Q ss_pred cCChHHHHHHHHHHHcCCChhc----------------ccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHH
Q 042091 506 SGSPTEKAILSWAVKLGMKFDR----------------VRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMI 569 (1023)
Q Consensus 506 ~g~p~e~All~~a~~~g~~~~~----------------~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i 569 (1023)
.|||+|.||++++.+.|.+... .++.+++++++||+|+||||+++++. ++++++|+|||||.|
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~i 456 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGV 456 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHH
Confidence 6999999999999988876542 23457799999999999999999985 466889999999999
Q ss_pred HHhhccccccCCccccCCchH-HHHHHHHHHHHh-ccchhhhhhhcccccc-----------CCCCCCCcEEEeeeeccC
Q 042091 570 LASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAA-RSLRCVAIAYRFILDK-----------WTLPEEELILLAIVGIKD 636 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~-~glr~l~~ayk~~~~~-----------~~~~e~~l~~lG~i~~~D 636 (1023)
+++|++++..+|...+++++. +++++.+++|++ +|+||+++|||.+.++ .+..|++++|+|+++++|
T Consensus 457 l~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~D 536 (917)
T TIGR01116 457 LERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLD 536 (917)
T ss_pred HHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeC
Confidence 999998877778878888776 889999999999 9999999999998532 133588999999999999
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
|+|++++++|+.|+++|++++|+|||+..||.++|+++|+..++.+ .....++|++++.++++++.+...+..||||++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED-VTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc-ccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 9999999999999999999999999999999999999999854321 123578999999999999999999999999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQK 796 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~ 796 (1023)
|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++++|++||+++.+|+|.++++++++||++|+|+++
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k 694 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQ 694 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHH
Q 042091 797 FIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIV 876 (1023)
Q Consensus 797 ~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~ 876 (1023)
+++|.+++|+..+++.+++.++..+.||+++|++|+|+++|.+|+++|+.++|++++|++||+.++++++++.+|+.+++
T Consensus 695 ~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~ 774 (917)
T TIGR01116 695 FIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLV 774 (917)
T ss_pred HHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHH
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccc---------cc-c------ccccccchhHHHHHHHHHHHHhhcccCCCCccceee-
Q 042091 877 QALYQVTVLLVLNFKGTSILHLEG---------ER-R------QHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFT- 939 (1023)
Q Consensus 877 ~~~~~~~~~~~l~~~~~~~~~~~~---------~~-~------~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~- 939 (1023)
+|++++++.++.+++.....+..+ .+ . ......++|++|++++++|+||.+++|+.+ .++|+
T Consensus 775 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~-~~~~~~ 853 (917)
T TIGR01116 775 VGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED-QSLLRM 853 (917)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc-cccccc
Confidence 999999775443332221101100 00 0 012346789999999999999999999964 56665
Q ss_pred cCcchHHHHHHHHHHHHHHHHH--HHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC
Q 042091 940 GVTKNYLFMGIIGITCVLQIII--IEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 1001 (1023)
Q Consensus 940 ~~~~n~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 1001 (1023)
++++|+++++++++++++|+++ +|+++.+|++.|++|.+|+++++++++.+++++++|+++|
T Consensus 854 ~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 854 PPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7789999999999999999876 7899999999999999999999999999999999998763
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.5e-130 Score=1219.35 Aligned_cols=813 Identities=25% Similarity=0.333 Sum_probs=682.8
Q ss_pred CHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccc
Q 042091 93 RVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEG 172 (1023)
Q Consensus 93 ~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~ 172 (1023)
..+++.+.++++. +||+++ |+++|+++||+|+++.++.+++|+.++++|+++++++++++++++++.+ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~--ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEA--EVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 4788999999986 699988 8999999999999999888999999999999999999999999998876 7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEEC------CEEEEEEeccceeccEEEecCCCccCcc
Q 042091 173 WYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRG------GKAVKISIFDVVVGEIVPLRIGDQVPAD 246 (1023)
Q Consensus 173 ~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~------g~~~~I~~~dLv~GDIV~l~~Gd~VPaD 246 (1023)
|.+++.|++++++..+++.++++++++..++|.+..+ .+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~-~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS-NTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8899888888888899999999999999999998876 68999999 7899999999999999999999999999
Q ss_pred EEEEeeCCeEEeeccccCCCceeccCCCC------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCC
Q 042091 247 GVLVTGHSLAIDESSMTGESKIVRKDHKT------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNG 314 (1023)
Q Consensus 247 gill~g~~l~VDES~LTGES~pv~K~~~~------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 314 (1023)
|+|++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++.+.+.++..
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999998754 479999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhh
Q 042091 315 EETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTI 394 (1023)
Q Consensus 315 ~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~i 394 (1023)
+++|+|+.++++++++..++++++.++++++.. .+. ++...+.++ +++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~~~----------------------~~~~~l~~a-------lsv 328 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---TKG----------------------DWWEAALFA-------LSV 328 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---hcC----------------------CHHHHHHHH-------HHH
Confidence 899999999999999888877777665554321 110 145566677 999
Q ss_pred hhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcc
Q 042091 395 VVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQM 474 (1023)
Q Consensus 395 lv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 474 (1023)
++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++.... +. .
T Consensus 329 ~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------~~---~ 399 (902)
T PRK10517 329 AVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------GK---T 399 (902)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------CC---C
Confidence 99999999999999999999999999999999999999999999999999999999999998864210 00 0
Q ss_pred cHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeec
Q 042091 475 HSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRI 554 (1023)
Q Consensus 475 ~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~ 554 (1023)
.+ +++..+.. |+.. . ...+||+|.|+++++...+ .......++.++++||+|++|+|+++++..
T Consensus 400 ~~---~ll~~a~l-~~~~----~------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~ 463 (902)
T PRK10517 400 SE---RVLHSAWL-NSHY----Q------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAEN 463 (902)
T ss_pred HH---HHHHHHHh-cCCc----C------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEEC
Confidence 11 23322222 2211 0 1258999999999987543 112334677889999999999999998877
Q ss_pred CCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC----CCCCCCcEEE
Q 042091 555 NSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW----TLPEEELILL 629 (1023)
Q Consensus 555 ~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~----~~~e~~l~~l 629 (1023)
++.+.+++||+||.|+++|+++. .+|...+++++. +++.+..++++++|+|++++|||.++.+. ...|+|++|+
T Consensus 464 ~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~l 542 (902)
T PRK10517 464 TEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILE 542 (902)
T ss_pred CCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceee
Confidence 77788999999999999999775 355667777766 78888899999999999999999875321 1236799999
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||+++||.. ..+++|++++.++++++++.++++
T Consensus 543 Gli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~~~ 615 (902)
T PRK10517 543 GYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAERT 615 (902)
T ss_pred ehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999953 368999999999999999999999
Q ss_pred eEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHH
Q 042091 710 TVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRS 789 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~ 789 (1023)
.||||++|+||.++|+.||++|++|+|+|||+||+||||+|||||||| +|+|+||++||++++||+|.+|++++++||+
T Consensus 616 ~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~ 694 (902)
T PRK10517 616 TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRR 694 (902)
T ss_pred cEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchH
Q 042091 790 VFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNI 869 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~ 869 (1023)
+|+||+|++.|.++.|+..++..+++.++..+.||+|+|+||+|+++| +|+++|++|||++++|++||+.+ ...+
T Consensus 695 i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~~-~~~~--- 769 (902)
T PRK10517 695 TFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRWN-PADL--- 769 (902)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCCC-HHHH---
Confidence 999999999999999999999888887776668999999999999999 68999999999999999999732 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHH
Q 042091 870 MWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMG 949 (1023)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~ 949 (1023)
++.++..+++.++..+..++..++.++... .......+|..|.+++++|+++.+++|+.+. ++|+|++.+.
T Consensus 770 -~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~ 840 (902)
T PRK10517 770 -GRFMVFFGPISSIFDILTFCLMWWVFHANT---PETQTLFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWP 840 (902)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHccccc---hhhHhHHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHH
Confidence 333344444443322222211111111100 0001123455699999999999999998642 4456666666
Q ss_pred HHHHHHHHHHH--HHH--HHHHcccCCCCC--HHHHHHHHHHHHHHHHHHHHhhhc
Q 042091 950 IIGITCVLQII--IIE--FLGKFTKTVKLD--WKLWLASIGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 950 ~~~~~~~~~~~--~v~--~~~~~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~k~~ 999 (1023)
.++++++++++ ++| +++.+|++.+++ +..|+++++++++ ++.+++|.+
T Consensus 841 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 841 LMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 66666655543 355 788999999999 7888888887776 556777753
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2e-129 Score=1214.20 Aligned_cols=813 Identities=23% Similarity=0.310 Sum_probs=685.3
Q ss_pred CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcc
Q 042091 92 IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEE 171 (1023)
Q Consensus 92 ~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~ 171 (1023)
...+++.+.|+++. +||+++ |+.+|+++||+|+++.++.+++|++++++|.++++++|+++++++++.+
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~--ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNV--EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 45788999999985 799988 8999999999999998888899999999999999999999999999875
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE------CCEEEEEEeccceeccEEEecCCCccCc
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR------GGKAVKISIFDVVVGEIVPLRIGDQVPA 245 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R------~g~~~~I~~~dLv~GDIV~l~~Gd~VPa 245 (1023)
.|++++.+++++++..+++.+++++++++.++|++..+ ..++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~-~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVK-NTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 78899889888999999999999999999999988775 6899999 9999999999999999999999999999
Q ss_pred cEEEEeeCCeEEeeccccCCCceeccCCCC------------CeeeccceEeecceeEEEEEEecccHHHHHHhhcccCC
Q 042091 246 DGVLVTGHSLAIDESSMTGESKIVRKDHKT------------PFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDN 313 (1023)
Q Consensus 246 Dgill~g~~l~VDES~LTGES~pv~K~~~~------------~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 313 (1023)
||++++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|++|++.+.+.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999998764 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhh
Q 042091 314 GEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVT 393 (1023)
Q Consensus 314 ~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ 393 (1023)
.+++|+|++++++++++..++++++.++++++.. .+. ++...+..+ ++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~~~----------------------~~~~~~~~a-------l~ 292 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---MKG----------------------DWLEAFLFA-------LA 292 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---hcC----------------------CHHHHHHHH-------HH
Confidence 6789999999999999988887777666554321 110 145566777 99
Q ss_pred hhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCc
Q 042091 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQ 473 (1023)
Q Consensus 394 ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~ 473 (1023)
+++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++.... .
T Consensus 293 l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~----~----- 363 (867)
T TIGR01524 293 VAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG----E----- 363 (867)
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC----C-----
Confidence 9999999999999999999999999999999999999999999999999999999999999998753111 0
Q ss_pred ccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEee
Q 042091 474 MHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKR 553 (1023)
Q Consensus 474 ~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~ 553 (1023)
..+ +++..+.+ |+.. + ..++||+|.|+++++.+.. ....+..++.++.+||+|++|+|+++++.
T Consensus 364 ~~~---~~l~~a~l-~~~~-----~-----~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~ 427 (867)
T TIGR01524 364 TSE---RVLKMAWL-NSYF-----Q-----TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVEN 427 (867)
T ss_pred CHH---HHHHHHHH-hCCC-----C-----CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEc
Confidence 011 22322222 2211 0 1257999999999987542 22334467888999999999999999886
Q ss_pred cCCeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC----CCCCCCcEE
Q 042091 554 INSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW----TLPEEELIL 628 (1023)
Q Consensus 554 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~----~~~e~~l~~ 628 (1023)
+++.+++++||+||.|+++|+++. .+|...+++++. +++++.+++++++|+|++++|||++..+. +..|++++|
T Consensus 428 ~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~ 506 (867)
T TIGR01524 428 RAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLII 506 (867)
T ss_pred CCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEE
Confidence 666678999999999999998764 356666777765 78889999999999999999999875432 124678999
Q ss_pred EeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhh
Q 042091 629 LAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQE 708 (1023)
Q Consensus 629 lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~ 708 (1023)
+|+++++||+|||++++|++|+++||+++|+|||++.||.+||+++||.. ..+++|.+++.++++++.+.+++
T Consensus 507 lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-------~~v~~g~~l~~~~~~el~~~~~~ 579 (867)
T TIGR01524 507 EGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-------NDFLLGADIEELSDEELARELRK 579 (867)
T ss_pred EEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-------CCeeecHhhhhCCHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999963 25899999999999999999999
Q ss_pred ceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHH
Q 042091 709 ITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGR 788 (1023)
Q Consensus 709 ~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR 788 (1023)
+.||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||++++||+|+++++++++||
T Consensus 580 ~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR 658 (867)
T TIGR01524 580 YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGR 658 (867)
T ss_pred CeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcch
Q 042091 789 SVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITN 868 (1023)
Q Consensus 789 ~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~ 868 (1023)
++|+||+|+++|+++.|+..++..+++.++..+.||+++|+||+|+++| +|+++|++|||++++|++||+ ++++.+.+
T Consensus 659 ~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~ 736 (867)
T TIGR01524 659 NTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGR 736 (867)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHH
Confidence 9999999999999999999999888888777678999999999999999 799999999999999987776 55654443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHH
Q 042091 869 IMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFM 948 (1023)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~ 948 (1023)
. ++..|++.+++.+..++..++.+...+. ......+|..|.+++++|+++.+++|+.+. ++|+|++.+
T Consensus 737 ~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~ 804 (867)
T TIGR01524 737 F----MLCIGPVSSIFDIATFLLMWFVFSANTV---EEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAA 804 (867)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHhcccch---hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHH
Confidence 3 3344444433222211111111111110 011234688899999999999999998642 445688777
Q ss_pred HHHHHHHHHHHHH--HHH--HHHcccCCCC--CHHHHHHHHHHHHHHHHHHHHhhhc
Q 042091 949 GIIGITCVLQIII--IEF--LGKFTKTVKL--DWKLWLASIGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 949 ~~~~~~~~~~~~~--v~~--~~~~~~~~~l--~~~~w~~~~~~~~~~~~~~~~~k~~ 999 (1023)
..+++++++++++ +|+ ++.+|++.|+ ++..|+++++++++ ++.++.|.+
T Consensus 805 ~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~ 859 (867)
T TIGR01524 805 PVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTF 859 (867)
T ss_pred HHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHH
Confidence 7777777776554 455 4889999987 66778888887765 557777754
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-123 Score=1060.29 Aligned_cols=890 Identities=26% Similarity=0.376 Sum_probs=746.0
Q ss_pred hhHHHHHHHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 042091 74 KEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILI 153 (1023)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll 153 (1023)
+.++..+.+..+....|...++++++.+.++..+||+.. ++.+++.+-|+|.+++|+..+-|..+.+|+...+.++++
T Consensus 24 ~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~--~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 24 KKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQ--EAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred hhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHH--HHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 344455555556667888899999999999999999998 789999999999999999888999889999999999999
Q ss_pred HHHHHHHHhcccc-----CCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEecc
Q 042091 154 VAAIASLALGIKT-----EGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFD 228 (1023)
Q Consensus 154 ~~ails~~~~~~~-----~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~d 228 (1023)
++++++++.+... +-..+..|-+..+...+++..+...+++.+..+-.+..+.+.+ ..++|+|||+...+..+|
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P-~~~~ViRdg~k~~i~~ee 180 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVP-QQALVIRDGEKMTINAEE 180 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccch-hhheeeecceeEEechhh
Confidence 9988887655421 1123355555444333444445556667677766777777775 789999999999999999
Q ss_pred ceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCC---------CCCeeeccceEeecceeEEEEEEecc
Q 042091 229 VVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH---------KTPFLMSGCKVADGVGTMMVTGVGIN 299 (1023)
Q Consensus 229 Lv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~---------~~~~l~aGt~v~~G~~~~~V~~tG~~ 299 (1023)
|||||+|.++-||+||||.+++++..|++|+|+|||||+|.++.+ ..|+-|.+|.+++|.++++|.+||.+
T Consensus 181 lVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~ 260 (1019)
T KOG0203|consen 181 LVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDR 260 (1019)
T ss_pred cccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCc
Confidence 999999999999999999999999999999999999999999876 25678999999999999999999999
Q ss_pred cHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHH
Q 042091 300 TEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIK 379 (1023)
Q Consensus 300 T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1023)
|.+|++..+.......++|++..++.+..++..+++.+++..|++.+.. ++ .+++
T Consensus 261 Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~---gy----------------------~~l~ 315 (1019)
T KOG0203|consen 261 TVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL---GY----------------------EWLR 315 (1019)
T ss_pred eEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh---cc----------------------hhHH
Confidence 9999999998888889999999999999999888887777766554432 21 1345
Q ss_pred HHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEE
Q 042091 380 IVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAF 459 (1023)
Q Consensus 380 ~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 459 (1023)
++... ++++++.+|+||+..++.+++...+||++++++||++.+.|+||+.++||+|||||||+|+|+|.++|
T Consensus 316 avv~~-------i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw 388 (1019)
T KOG0203|consen 316 AVVFL-------IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW 388 (1019)
T ss_pred Hhhhh-------heeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeec
Confidence 55545 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcccCCCC--C----C-CcccHHHHHHHHHHHHccCCCcccccCCCC---ceeecCChHHHHHHHHHHHcCCChhccc
Q 042091 460 IGRKKINPPD--D----S-SQMHSIVIYLLSEGIAQNTTGNVFVPKDGE---AVEVSGSPTEKAILSWAVKLGMKFDRVR 529 (1023)
Q Consensus 460 ~~~~~~~~~~--~----~-~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~---~~~~~g~p~e~All~~a~~~g~~~~~~~ 529 (1023)
.++.....+. + . ...++....++ .+...|+.+.....+++- +....|++.|.||++++...-.+....|
T Consensus 389 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~-r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R 467 (1019)
T KOG0203|consen 389 FDNQIHEADTTEDQSGQSFDKSSATFIALS-RIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELR 467 (1019)
T ss_pred cCCceeeeechhhhhcccccccCchHHHHH-HHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHH
Confidence 9865332211 0 0 11123333444 444444444332222211 2356899999999999997766778888
Q ss_pred ccccEEEEecCCCCCceEEEEEeecC---CeEEEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccc
Q 042091 530 SETTVLHVFPFNSEKKRGGVAVKRIN---SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSL 605 (1023)
Q Consensus 530 ~~~~il~~~~F~s~~k~msviv~~~~---~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~gl 605 (1023)
+.++.+.+.||||.+|++-.+.+..+ .++.+.+|||||.++++|+.+. -+|+..|+++.. +.+.+...++...|.
T Consensus 468 ~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~Ge 546 (1019)
T KOG0203|consen 468 ERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGE 546 (1019)
T ss_pred HhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcch
Confidence 89999999999999999988877654 4678889999999999999875 477888999888 899999999999999
Q ss_pred hhhhhhhcccccc------------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH
Q 042091 606 RCVAIAYRFILDK------------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE 673 (1023)
Q Consensus 606 r~l~~ayk~~~~~------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 673 (1023)
||++|+++.+.++ .+.+-+++.|+|++.+-||||..+++|+..|+.|||+|+|+|||++.||+++|++
T Consensus 547 rVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~ 626 (1019)
T KOG0203|consen 547 RVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS 626 (1019)
T ss_pred HHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhh
Confidence 9999999998532 2345678999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCC-------------------CCCCeeeechhhhccCHHHHHHHHhhce--EeccCCHhhHHHHHHHHHhCCC
Q 042091 674 CGILGSDAE-------------------ANDPNIIEGKVFRALSDKEREKVAQEIT--VMGRSSPNDKLLLVQALRKGGD 732 (1023)
Q Consensus 674 ~gi~~~~~~-------------------~~~~~vi~g~~~~~l~~~~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~g~ 732 (1023)
.||.....+ ...+.|++|.++..++.+++++++.+.. ||||.||+||+.||+..|++|.
T Consensus 627 vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~Ga 706 (1019)
T KOG0203|consen 627 VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGA 706 (1019)
T ss_pred eeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCc
Confidence 998765442 2357899999999999999999998764 9999999999999999999999
Q ss_pred EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 042091 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLIN 812 (1023)
Q Consensus 733 ~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~ 812 (1023)
+|+++|||+||+||||.||||||||+.|+|++|++||+||+||||++|+..+++||.+|+|+||.|.|.++.|+..+.+.
T Consensus 707 iVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~Pf 786 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 786 (1019)
T ss_pred EEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCC-CCCCCcchHHH-HHHHHHHHHHHHHHHHHHH
Q 042091 813 VVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVG-RKEPLITNIMW-RNLIVQALYQVTVLLVLNF 890 (1023)
Q Consensus 813 ~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 890 (1023)
+++.+++.|.|+.++++|.+++.+|+.||++||+|+|+.++|+|+||+ +.+.++|..+. ...+..+.+|.+..|+-+|
T Consensus 787 L~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYF 866 (1019)
T KOG0203|consen 787 LLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYF 866 (1019)
T ss_pred HHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 67888886553 3445567777766665554
Q ss_pred hhhcccccc-----c--------------c---------ccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCc
Q 042091 891 KGTSILHLE-----G--------------E---------RRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVT 942 (1023)
Q Consensus 891 ~~~~~~~~~-----~--------------~---------~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~ 942 (1023)
..+..-++. + + .+..-..+..|..|.++|++|+++.+.|.++ +.++|...+
T Consensus 867 vima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTR-RnSlfqqGm 945 (1019)
T KOG0203|consen 867 VIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTR-RNSIFQQGM 945 (1019)
T ss_pred HHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcc-hhHHHHhhh
Confidence 322111110 0 0 0111234567888999999999999988875 477888779
Q ss_pred chHHHHHHHHHHHHH--HHHHHHHHHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC
Q 042091 943 KNYLFMGIIGITCVL--QIIIIEFLGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPV 1001 (1023)
Q Consensus 943 ~n~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 1001 (1023)
+||+++.+++...++ ++.++|.....+++.|+.|.+|+..+..+++.|+.+|++|++.|
T Consensus 946 rN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 946 RNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIR 1006 (1019)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhh
Confidence 999998887765544 34456888899999999999999999999999999999999877
No 13
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.1e-118 Score=1104.66 Aligned_cols=747 Identities=24% Similarity=0.354 Sum_probs=623.2
Q ss_pred CCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHH
Q 042091 108 GISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVI 187 (1023)
Q Consensus 108 GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~ 187 (1023)
|||++ |+++|+++||+|+++. +.+++|+.++++|.++++++|+++++++++++ .|.+++.+++++++..
T Consensus 1 GLs~~--ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSA--EAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHH--HHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 78887 8999999999999996 45678899999999999999999999999887 6899988888888888
Q ss_pred HHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCc
Q 042091 188 VVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESK 267 (1023)
Q Consensus 188 ~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~ 267 (1023)
.++.++++++++..++|.+..+ .+++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~~~-~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQSLA-PKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 9999999999999999987765 689999999999999999999999999999999999999999878999999999999
Q ss_pred eeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 268 IVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLV 347 (1023)
Q Consensus 268 pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~ 347 (1023)
|+.|.+++. +|+||.|.+|+++++|++||.+|++|++.+++.+++.+++|+|+.+++++.++.++.+++++++++++..
T Consensus 149 PV~K~~~~~-v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGDI-AYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCCe-eeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998864 9999999999999999999999999999999998888889999999999999988877777666654432
Q ss_pred HHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCccccc
Q 042091 348 RFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRR 427 (1023)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~ 427 (1023)
. .+. ++...+..+ +++++++|||+||++++++++.++++|+|+|+++|+
T Consensus 228 ~--~~~----------------------~~~~~~~~~-------i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~ 276 (755)
T TIGR01647 228 G--RGE----------------------SFREGLQFA-------LVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTR 276 (755)
T ss_pred H--cCC----------------------CHHHHHHHH-------HHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcc
Confidence 1 110 145667777 999999999999999999999999999999999999
Q ss_pred chhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecC
Q 042091 428 LSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSG 507 (1023)
Q Consensus 428 ~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g 507 (1023)
++++|+||++|+||||||||||+|+|+|.+++..+..+ +++ +++..+..++. +.++
T Consensus 277 l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---------~~~--~~l~~a~~~~~-------------~~~~ 332 (755)
T TIGR01647 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF---------DKD--DVLLYAALASR-------------EEDQ 332 (755)
T ss_pred cHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC---------CHH--HHHHHHHHhCC-------------CCCC
Confidence 99999999999999999999999999999998643211 111 23333333321 1257
Q ss_pred ChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecC-CeEEEEEeCchHHHHHhhccccccCCccccC
Q 042091 508 SPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTKYLDTDGQLQSI 586 (1023)
Q Consensus 508 ~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l 586 (1023)
||+|+|+++++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++.+.++||+||.|++.|+..
T Consensus 333 ~pi~~Ai~~~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~---------- 398 (755)
T TIGR01647 333 DAIDTAVLGSAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK---------- 398 (755)
T ss_pred ChHHHHHHHHHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc----------
Confidence 999999999887543 22345778899999999999999987653 667788999999999999742
Q ss_pred CchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH
Q 042091 587 DGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT 666 (1023)
Q Consensus 587 ~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 666 (1023)
.+..+++++.+++++.+|+|++++|||+ .|++++|+|+++++||+|||++++|++|+++||+++|+|||++.|
T Consensus 399 ~~~~~~~~~~~~~~~~~G~rvl~vA~~~-------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 471 (755)
T TIGR01647 399 KEIEEKVEEKVDELASRGYRALGVARTD-------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAI 471 (755)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEEEc-------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 1112677888899999999999999973 357899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHH
Q 042091 667 AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPA 746 (1023)
Q Consensus 667 a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~a 746 (1023)
|.++|+++||..... ....+.+|++.+.++++++++.++++.+|||++|+||.++|+.+|++|++|+|+|||+||+||
T Consensus 472 A~~IA~~lGI~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapA 549 (755)
T TIGR01647 472 AKETARRLGLGTNIY--TADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPA 549 (755)
T ss_pred HHHHHHHcCCCCCCc--CHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHH
Confidence 999999999975211 112344566667889999999999999999999999999999999999999999999999999
Q ss_pred hhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q 042091 747 LHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNA 826 (1023)
Q Consensus 747 L~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~ 826 (1023)
|++|||||||| +|+|+||++||+++++|+|+++++++++||++|+||+|++.|+++.|+..++..+++.++.+ .||+|
T Consensus 550 L~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~ 627 (755)
T TIGR01647 550 LKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPP 627 (755)
T ss_pred HHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhH
Confidence 99999999999 99999999999999999999999999999999999999999999999998887777666544 45999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccccccccc
Q 042091 827 VQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSI-LHLEGERRQH 905 (1023)
Q Consensus 827 ~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ 905 (1023)
+|++|+|+++|. +++++++|++++. ++| +...++ .++..++..|++.++..+.++++.... +.........
T Consensus 628 ~~il~~~l~~d~-~~~~l~~~~~~~~---~~p---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (755)
T TIGR01647 628 IMVVIIAILNDG-TIMTIAYDNVKPS---KLP---QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQL 699 (755)
T ss_pred HHHHHHHHHHhH-hHhhccCCCCCCC---CCC---CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccc
Confidence 999999999996 6999999998742 333 333343 566667777877776555544433210 0000000011
Q ss_pred ccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHH
Q 042091 906 ASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQ 958 (1023)
Q Consensus 906 ~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 958 (1023)
.....+|+.|..+++.|.++.+++|+.+ ..|+.. .+++++.++++.+++.
T Consensus 700 ~~~~~~t~~f~~~~~~~~~~~~~~r~~~--~~~~~~-p~~~l~~~~~~~~~~~ 749 (755)
T TIGR01647 700 LHGNLQSLIYLQVSISGQATIFVTRTHG--FFWSER-PGKLLFIAFVIAQIIA 749 (755)
T ss_pred cHhhhHHHHHHHHHHHHHHHHheeccCC--CCcccC-CcHHHHHHHHHHHHHH
Confidence 2346789999999999999999999864 233333 4555544444444443
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=8.2e-119 Score=1142.31 Aligned_cols=836 Identities=21% Similarity=0.258 Sum_probs=661.6
Q ss_pred hhhccccccccccchh-hHHHHHHHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHH
Q 042091 59 VLNASRRFRYTLDLKK-EEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFL 137 (1023)
Q Consensus 59 ~l~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~ 137 (1023)
+.++..|+-|+++.++ +.+.+....... ........ ....||+.+ |+.+|++.||.|+++.+ .+++|
T Consensus 98 f~~~~~~y~~~~~~~~~f~~~~~~~~~~~-------~~~~~~~~--~~~~GLs~~--e~~~r~~~yG~N~i~~~-~~s~~ 165 (1054)
T TIGR01657 98 FDFRKQRFSYHEKELKIFSPLPYLFKEKS-------FGVYSTCA--GHSNGLTTG--DIAQRKAKYGKNEIEIP-VPSFL 165 (1054)
T ss_pred EEEEEEEEEEECCCCceEEeccccccccc-------chhhhhhh--hhccCCCHH--HHHHHHHhcCCCeeecC-CCCHH
Confidence 8888899999886654 544332211000 01111111 224699987 89999999999999976 58999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEE
Q 042091 138 NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMR 217 (1023)
Q Consensus 138 ~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R 217 (1023)
+++++++.+|+++++++++++++.. +.|++++.+++++++...++.++++++.++++++... +..++|+|
T Consensus 166 ~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~--~~~v~V~R 235 (1054)
T TIGR01657 166 ELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHK--PQSVIVIR 235 (1054)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CeeEEEEE
Confidence 9999999999999999987776643 2688998888888888888888888888887776543 36899999
Q ss_pred CCEEEEEEeccceeccEEEec--CCCccCccEEEEeeCCeEEeeccccCCCceeccCCC-----------------CCee
Q 042091 218 GGKAVKISIFDVVVGEIVPLR--IGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK-----------------TPFL 278 (1023)
Q Consensus 218 ~g~~~~I~~~dLv~GDIV~l~--~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~-----------------~~~l 278 (1023)
||++++|+++||||||||.|+ +||+|||||+|++|+ |.||||+|||||.|+.|.+. .+++
T Consensus 236 dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~l 314 (1054)
T TIGR01657 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVL 314 (1054)
T ss_pred CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEE
Confidence 999999999999999999999 999999999999996 79999999999999999752 3479
Q ss_pred eccceEee-------cceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042091 279 MSGCKVAD-------GVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFT 351 (1023)
Q Consensus 279 ~aGt~v~~-------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~ 351 (1023)
|+||.|.+ |.+.++|++||.+|..|++++++...+..++++++.+.++...+..++++.+++ .+..+..
T Consensus 315 f~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~----~~~~~~~ 390 (1054)
T TIGR01657 315 FGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIY----TIIELIK 390 (1054)
T ss_pred EcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 99999985 789999999999999999999998888888999988877766554443332222 1111111
Q ss_pred ccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhh
Q 042091 352 GHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSAC 431 (1023)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~ 431 (1023)
.. . .+...+..+ +++++++|||+||++++++++++++||+|+|++||+++++
T Consensus 391 ~~--~-------------------~~~~~~l~~-------l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~i 442 (1054)
T TIGR01657 391 DG--R-------------------PLGKIILRS-------LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRI 442 (1054)
T ss_pred cC--C-------------------cHHHHHHHH-------HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccc
Confidence 00 0 145667777 9999999999999999999999999999999999999999
Q ss_pred hhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHH
Q 042091 432 ETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTE 511 (1023)
Q Consensus 432 E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e 511 (1023)
|++|++|++|||||||||+|+|+|.+++..+...................+..+++.||+... . ++ +..|||+|
T Consensus 443 e~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~--~-~~---~~~Gdp~E 516 (1054)
T TIGR01657 443 NFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK--L-EG---KLVGDPLD 516 (1054)
T ss_pred eecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEE--E-CC---EEecCHHH
Confidence 999999999999999999999999999875431110000000000112234456677776532 1 11 57899999
Q ss_pred HHHHHHHHHc-CC----Chhcc----------cccccEEEEecCCCCCceEEEEEeecC-CeEEEEEeCchHHHHHhhcc
Q 042091 512 KAILSWAVKL-GM----KFDRV----------RSETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTK 575 (1023)
Q Consensus 512 ~All~~a~~~-g~----~~~~~----------~~~~~il~~~~F~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~ 575 (1023)
.|+++++... .. ..... ..++++++++||+|++|||||+++.++ +++++++|||||.|+++|+.
T Consensus 517 ~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~ 596 (1054)
T TIGR01657 517 KKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP 596 (1054)
T ss_pred HHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC
Confidence 9999986311 00 00000 145789999999999999999998754 56789999999999999984
Q ss_pred ccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc---------CCCCCCCcEEEeeeeccCCCcccHHHHH
Q 042091 576 YLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK---------WTLPEEELILLAIVGIKDPCRPGVKDAV 646 (1023)
Q Consensus 576 ~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~---------~~~~e~~l~~lG~i~~~D~lr~~~~~~I 646 (1023)
. +..+++++.+++|+++|+||+|+|||++++. ++..|+||+|+|+++|+||+||+++++|
T Consensus 597 ~-----------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I 665 (1054)
T TIGR01657 597 E-----------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVI 665 (1054)
T ss_pred c-----------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHH
Confidence 1 0115688899999999999999999998531 2446899999999999999999999999
Q ss_pred HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC--------------------------------------------
Q 042091 647 KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE-------------------------------------------- 682 (1023)
Q Consensus 647 ~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-------------------------------------------- 682 (1023)
+.|+++||+++|+||||+.||.+||++|||.++...
T Consensus 666 ~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1054)
T TIGR01657 666 KELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745 (1054)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchh
Confidence 999999999999999999999999999999754310
Q ss_pred ----CCCCeeeechhhhc---cCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 683 ----ANDPNIIEGKVFRA---LSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 683 ----~~~~~vi~g~~~~~---l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.....+++|++++. +.++++.+++.++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||
T Consensus 746 ~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIa 825 (1054)
T TIGR01657 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGIS 825 (1054)
T ss_pred hhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCccee
Confidence 01137899999876 46678999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 042091 756 MGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLI 835 (1023)
Q Consensus 756 mg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli 835 (1023)
|| .+ | |..+||+++.+++|++++++|+|||+++.|+++.++|.+.+++...+..++ ++..+.||+++|++|+|++
T Consensus 826 m~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li 900 (1054)
T TIGR01657 826 LS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLL 900 (1054)
T ss_pred ec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHH
Confidence 98 33 4 448999999999999999999999999999999999999999987655433 3334589999999999999
Q ss_pred HHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccc---cc--cccccccccc
Q 042091 836 MDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHL---EG--ERRQHASDVK 910 (1023)
Q Consensus 836 ~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~--~~~~~~~~~~ 910 (1023)
++++++++++.++|.+++|++||. ++++++.++..++.|+++++++.++.++........ .. .+........
T Consensus 901 ~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1054)
T TIGR01657 901 LIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLL 977 (1054)
T ss_pred HHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHH
Confidence 999999999999999999999994 689999999999999999988777766554321110 00 0011223455
Q ss_pred hhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH----HHHHHHHcccCCCCCH
Q 042091 911 NTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII----IIEFLGKFTKTVKLDW 976 (1023)
Q Consensus 911 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~ 976 (1023)
+|++|.. +.+|.+..+.+++. ..++.+++++|++|+..+++++++++. ++++++.+|+++|++.
T Consensus 978 ~T~~f~~-~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 978 NTVLFFV-SSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHHHHH-HHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 7999954 44455555666664 456667899999988877776666542 2578999999999985
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.1e-107 Score=1043.56 Aligned_cols=840 Identities=23% Similarity=0.296 Sum_probs=637.7
Q ss_pred cCCCcCCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhH-HHHHHHHHHHHHHHHHHHHH
Q 042091 123 FGSNTYPLKKGRSFL----NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGA-SIAFAVFLVIVVTAISDYRQ 197 (1023)
Q Consensus 123 ~G~N~~~~~~~~~~~----~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~-~i~~~lll~~~v~~~~~~~~ 197 (1023)
|.+|.+...| +++| +.+++||+++.+++|++++++++++.+++.+ ++..+ .+++++++..+..+++|+++
T Consensus 1 ~~~N~i~tsk-Y~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~----~~t~~~pL~~v~~~~~~~~~~ed~~r 75 (1057)
T TIGR01652 1 FCSNKISTTK-YTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY----RGTSIVPLAFVLIVTAIKEAIEDIRR 75 (1057)
T ss_pred CCCCcccCcc-CcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC----ccHhHHhHHHHHHHHHHHHHHHHHHH
Confidence 5679998766 5554 6789999999999999999999998876432 22221 22222233345566677777
Q ss_pred HHHHHHHhccccCceEEEEEC-CEEEEEEeccceeccEEEecCCCccCccEEEEeeCC----eEEeeccccCCCceeccC
Q 042091 198 SLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS----LAIDESSMTGESKIVRKD 272 (1023)
Q Consensus 198 ~~~~~~l~~~~~~~~~~V~R~-g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGES~pv~K~ 272 (1023)
+++.++. ++..++|+|+ |++++++++||+|||+|.|++||+|||||++++++. |.||||+|||||.|+.|.
T Consensus 76 ~~~d~~~----n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~ 151 (1057)
T TIGR01652 76 RRRDKEV----NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQ 151 (1057)
T ss_pred HHhHHHH----hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEee
Confidence 6665544 3468999997 899999999999999999999999999999999654 899999999999999886
Q ss_pred CC-----------------------------------------------CCeeeccceEee-cceeEEEEEEecccHHHH
Q 042091 273 HK-----------------------------------------------TPFLMSGCKVAD-GVGTMMVTGVGINTEWGL 304 (1023)
Q Consensus 273 ~~-----------------------------------------------~~~l~aGt~v~~-G~~~~~V~~tG~~T~~g~ 304 (1023)
+. +|++++||.+.+ |.+.|+|++||.+|++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~ 231 (1057)
T TIGR01652 152 ALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR 231 (1057)
T ss_pred cchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh
Confidence 31 257899999999 899999999999996654
Q ss_pred HHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccc-ccccchHHHHHHHHHH
Q 042091 305 LMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGR-TSVSDAVDGVIKIVTI 383 (1023)
Q Consensus 305 i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 383 (1023)
+....+.+.++++++++++..++..+.++++++++++...+ ... .....|+... ..........+..|..
T Consensus 232 ---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~--~~~----~~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 232 ---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIW--NDA----HGKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred ---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhe--ecc----cCCCccceecCcccccchhHHHHHHHH
Confidence 45556778899999999999888877777776665543222 111 0111232210 0011111122333444
Q ss_pred hhcchhhhhhhhhhhccCchhHHHHHHHHHHH------HHHHhC----CcccccchhhhhccCceeeeeCCccccccCce
Q 042091 384 ATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSM------RKMMAD----KALVRRLSACETMGSATTICSDKTGTLTLNEM 453 (1023)
Q Consensus 384 a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~------~~l~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m 453 (1023)
+ +.++..++|++|+..++++.+.++ ++|.++ +++||+++++|+||++++||+|||||||+|+|
T Consensus 303 ~-------~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M 375 (1057)
T TIGR01652 303 F-------LILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIM 375 (1057)
T ss_pred H-------HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeE
Confidence 4 889999999999999999999998 788875 49999999999999999999999999999999
Q ss_pred EEEEEEeCCcccCCCCC---------CC-----------c-------------------ccHHHHHHHHHHHHccCCCcc
Q 042091 454 TVVEAFIGRKKINPPDD---------SS-----------Q-------------------MHSIVIYLLSEGIAQNTTGNV 494 (1023)
Q Consensus 454 ~v~~~~~~~~~~~~~~~---------~~-----------~-------------------~~~~~~~ll~~~i~~~~~~~~ 494 (1023)
++++++++|..|..... .. . ...+....+..+++.||+...
T Consensus 376 ~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~ 455 (1057)
T TIGR01652 376 EFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455 (1057)
T ss_pred EEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccc
Confidence 99999998776542110 00 0 000111223345666766543
Q ss_pred cccCCC--CceeecCChHHHHHHHHHHHcCCChhcc--------------cccccEEEEecCCCCCceEEEEEeecCCeE
Q 042091 495 FVPKDG--EAVEVSGSPTEKAILSWAVKLGMKFDRV--------------RSETTVLHVFPFNSEKKRGGVAVKRINSEV 558 (1023)
Q Consensus 495 ~~~~~~--~~~~~~g~p~e~All~~a~~~g~~~~~~--------------~~~~~il~~~~F~s~~k~msviv~~~~~~~ 558 (1023)
...+++ ...+.++||+|.||+++|...|+.+... ..++++++++||+|+||||||+++.+++++
T Consensus 456 ~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~ 535 (1057)
T TIGR01652 456 EFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRI 535 (1057)
T ss_pred cccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeE
Confidence 221111 1335679999999999999998876432 235889999999999999999999888889
Q ss_pred EEEEeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC------------------
Q 042091 559 HVHWKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW------------------ 619 (1023)
Q Consensus 559 ~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~------------------ 619 (1023)
++++|||||.|+++|+.. ++.. +++++.+++|+.+|+||+++|||.+++++
T Consensus 536 ~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r 605 (1057)
T TIGR01652 536 KLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDR 605 (1057)
T ss_pred EEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhH
Confidence 999999999999999741 1222 67889999999999999999999985321
Q ss_pred --------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---------
Q 042091 620 --------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE--------- 682 (1023)
Q Consensus 620 --------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~--------- 682 (1023)
+..|+|++|+|+++++||+|+|++++|+.|++|||++||+|||+++||.+||++|||.+.+..
T Consensus 606 ~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~ 685 (1057)
T TIGR01652 606 EEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESL 685 (1057)
T ss_pred HHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCch
Confidence 235899999999999999999999999999999999999999999999999999999875431
Q ss_pred ---------------------------CCCCeeeechhhhccCHHH----HHHHHhhce--EeccCCHhhHHHHHHHHHh
Q 042091 683 ---------------------------ANDPNIIEGKVFRALSDKE----REKVAQEIT--VMGRSSPNDKLLLVQALRK 729 (1023)
Q Consensus 683 ---------------------------~~~~~vi~g~~~~~l~~~~----~~~~~~~~~--v~ar~~P~~K~~iV~~lq~ 729 (1023)
....++++|++++.+.+++ +.+++.++. ||||++|+||.++|+.+|+
T Consensus 686 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~ 765 (1057)
T TIGR01652 686 DATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKK 765 (1057)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHh
Confidence 1123689999998655443 445555554 9999999999999999999
Q ss_pred C-CCEEEEEcCCccCHHHhhhCCccEEecCCCCH--HHHhccCccccCCChhHHHHHH-HHHHHHHHhhHHHHHHHHHHH
Q 042091 730 G-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIILDDNFASVVKVV-RWGRSVFANIQKFIQFQLTVN 805 (1023)
Q Consensus 730 ~-g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~--~ak~~adiil~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n 805 (1023)
. |++|+|+|||+||+|||++|||||++ .|++ .|+++||+++. +|..+.+++ .+||++|+|+++++.|.+++|
T Consensus 766 ~~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn 841 (1057)
T TIGR01652 766 STGKTTLAIGDGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKN 841 (1057)
T ss_pred cCCCeEEEEeCCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 8 99999999999999999999999965 5666 59999999998 599999997 889999999999999999999
Q ss_pred HHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHHhcc--CCCCccccccCCC----CCCCCCcchHHHHHHHH
Q 042091 806 VAALLINVVAAISSG---DVPLNAVQLLWVNLIMDTLGALALAT--EPPTDHLMHRLPV----GRKEPLITNIMWRNLIV 876 (1023)
Q Consensus 806 v~~i~~~~~~~~~~~---~~pl~~~qll~~nli~d~l~~lal~~--e~~~~~~m~~~P~----~~~~~~~~~~~~~~~~~ 876 (1023)
++.+++.+++.++++ .+++++++++|+|++++.+|++++|. +++++++|.++|+ +++.++++...+..|++
T Consensus 842 ~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~ 921 (1057)
T TIGR01652 842 LIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWML 921 (1057)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHH
Confidence 999999999887654 46899999999999999999999974 6778899999997 66788888887778889
Q ss_pred HHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHH
Q 042091 877 QALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCV 956 (1023)
Q Consensus 877 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~ 956 (1023)
.|++|+++++++.+..........++.........+++|+++++...+..+..-+ .| +|+.+.++.++++
T Consensus 922 ~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~w-t~~~~~~~~~S~~ 991 (1057)
T TIGR01652 922 DGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEIN---------RW-NWISLITIWGSIL 991 (1057)
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh---------Hh-HHHHHHHHHHHHH
Confidence 9999999887765543322111111111234556777888887777666543221 11 1222222223333
Q ss_pred HHHHHHHHHHHcc---------cCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhc
Q 042091 957 LQIIIIEFLGKFT---------KTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFV 1011 (1023)
Q Consensus 957 ~~~~~v~~~~~~~---------~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~ 1011 (1023)
+.+++......++ ...--++.+|+..++...++++++.++|++++.+.|...+..
T Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i 1055 (1057)
T TIGR01652 992 VWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIV 1055 (1057)
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHh
Confidence 3222221111111 111136789999999999999999999999999999876653
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.3e-101 Score=972.13 Aligned_cols=840 Identities=20% Similarity=0.248 Sum_probs=618.7
Q ss_pred hcCCCcCCCCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 042091 122 SFGSNTYPLKKGRSFLNF----LWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQ 197 (1023)
Q Consensus 122 ~~G~N~~~~~~~~~~~~~----l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~ 197 (1023)
.|..|.+...| |++|.| +++||+++.++++++.+++++++.+++.+. +...+.+++++++..+.+++.||++
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~---~t~~~PL~~vl~v~~ike~~Ed~~r 161 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR---GASILPLAFVLLVTAVKDAYEDWRR 161 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc---chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999776 777665 689999999999999999999998765331 1112222233333334455566666
Q ss_pred HHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCC----eEEeeccccCCCceeccCC
Q 042091 198 SLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS----LAIDESSMTGESKIVRKDH 273 (1023)
Q Consensus 198 ~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGES~pv~K~~ 273 (1023)
+++.++. ++..++|+|+|++++++++||+|||+|.|++||+|||||++++++. ++||||+|||||.|+.|.+
T Consensus 162 ~k~d~~~----N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 162 HRSDRIE----NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHhHHhh----cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 5555444 4568999999999999999999999999999999999999998433 7999999999999998863
Q ss_pred C--------------------------------------------CCeeeccceEeec-ceeEEEEEEecccHHHHHHhh
Q 042091 274 K--------------------------------------------TPFLMSGCKVADG-VGTMMVTGVGINTEWGLLMAS 308 (1023)
Q Consensus 274 ~--------------------------------------------~~~l~aGt~v~~G-~~~~~V~~tG~~T~~g~i~~~ 308 (1023)
+ +|++++||.+.+. .+.|+|++||.+| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 1 3467777877776 4999999999999 46666
Q ss_pred cccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccc-c----ccc----ch-HHHHH
Q 042091 309 ISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGR-T----SVS----DA-VDGVI 378 (1023)
Q Consensus 309 ~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~----~~-~~~~~ 378 (1023)
..++..+.+++++++|++..+++.+.+++|+++.++...|.... .+......|+... . ... .. ...+.
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~--~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRH--RDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccc--cccccccccccccccccccccccccchhhHHHHH
Confidence 66667789999999999998888877777776655543322111 1110011122110 0 000 00 11122
Q ss_pred HHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCC----------cccccchhhhhccCceeeeeCCcccc
Q 042091 379 KIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK----------ALVRRLSACETMGSATTICSDKTGTL 448 (1023)
Q Consensus 379 ~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~----------ilvr~~~~~E~lg~v~~I~~DKTGTL 448 (1023)
. |... +.++...+|.+|+..+.++....+..|.++. +.+|+.+.+|+||+|++||+||||||
T Consensus 393 ~-f~~~-------lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTL 464 (1178)
T PLN03190 393 T-FLMS-------VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTL 464 (1178)
T ss_pred H-HHHH-------HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcc
Confidence 2 2222 5666789999999999999977677776655 78999999999999999999999999
Q ss_pred ccCceEEEEEEeCCcccCCCCC--------------C------C--------------ccc-H--HHHHHHHHHHHccCC
Q 042091 449 TLNEMTVVEAFIGRKKINPPDD--------------S------S--------------QMH-S--IVIYLLSEGIAQNTT 491 (1023)
Q Consensus 449 T~n~m~v~~~~~~~~~~~~~~~--------------~------~--------------~~~-~--~~~~ll~~~i~~~~~ 491 (1023)
|+|+|++++++++|..|+.... . . ... + .....+..+++.||+
T Consensus 465 T~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCht 544 (1178)
T PLN03190 465 TENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNT 544 (1178)
T ss_pred ccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCC
Confidence 9999999999998766642100 0 0 000 0 111223456777777
Q ss_pred CcccccCCC-C-----ceeecCChHHHHHHHHHHHcCCC------------hhcccccccEEEEecCCCCCceEEEEEee
Q 042091 492 GNVFVPKDG-E-----AVEVSGSPTEKAILSWAVKLGMK------------FDRVRSETTVLHVFPFNSEKKRGGVAVKR 553 (1023)
Q Consensus 492 ~~~~~~~~~-~-----~~~~~g~p~e~All~~a~~~g~~------------~~~~~~~~~il~~~~F~s~~k~msviv~~ 553 (1023)
......+++ + ..+.++||+|.||+++|.+.|+. ....+.++++++++||+|+||||||+++.
T Consensus 545 v~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~ 624 (1178)
T PLN03190 545 IVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGC 624 (1178)
T ss_pred ceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEc
Confidence 643211111 1 23566799999999999999973 33445578999999999999999999998
Q ss_pred cCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccccc----C----------
Q 042091 554 INSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDK----W---------- 619 (1023)
Q Consensus 554 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~----~---------- 619 (1023)
+++++.+++|||||.|+++|++..+. +..+++++++++|+++|+|||++|||.++++ |
T Consensus 625 ~~~~~~l~~KGA~e~il~~~~~~~~~--------~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~ 696 (1178)
T PLN03190 625 PDKTVKVFVKGADTSMFSVIDRSLNM--------NVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTA 696 (1178)
T ss_pred CCCcEEEEEecCcHHHHHhhcccccc--------hhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhh
Confidence 88889999999999999999754211 1126788999999999999999999998532 1
Q ss_pred ------------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC-----
Q 042091 620 ------------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE----- 682 (1023)
Q Consensus 620 ------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~----- 682 (1023)
+..|+||+++|+++++||+|++++++|+.|+++||++||+|||+.+||.+||++|||.+...+
T Consensus 697 ~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~ 776 (1178)
T PLN03190 697 LIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIIN 776 (1178)
T ss_pred hhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEec
Confidence 236899999999999999999999999999999999999999999999999999999865421
Q ss_pred ---------------------------------------CCCCeeeechhhhccCH----HHHHHHHhhce--EeccCCH
Q 042091 683 ---------------------------------------ANDPNIIEGKVFRALSD----KEREKVAQEIT--VMGRSSP 717 (1023)
Q Consensus 683 ---------------------------------------~~~~~vi~g~~~~~l~~----~~~~~~~~~~~--v~ar~~P 717 (1023)
.+..++++|+++..+.+ +++.++..++. ||||++|
T Consensus 777 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP 856 (1178)
T PLN03190 777 SNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAP 856 (1178)
T ss_pred CCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCH
Confidence 01247899999988765 45666666665 7999999
Q ss_pred hhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEEecCCCCH--HHHhccCccccCCChhHHHHHH-HHHHHHHHh
Q 042091 718 NDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIILDDNFASVVKVV-RWGRSVFAN 793 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~--~ak~~adiil~~~~~~~i~~~i-~~gR~~~~~ 793 (1023)
+||+++|+.+|++ +++|+|+|||+||+|||++||||| |+.|+| .|+.+||+.+. .|..+.+++ -+||+.|+|
T Consensus 857 ~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R 932 (1178)
T PLN03190 857 LQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQR 932 (1178)
T ss_pred HHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHH
Confidence 9999999999997 589999999999999999999999 557888 79999999999 677788886 579999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHHHHHHHHHHHhc-c--CCCCccccccCCC---CCCCC
Q 042091 794 IQKFIQFQLTVNVAALLINVVAAISSGD---VPLNAVQLLWVNLIMDTLGALALA-T--EPPTDHLMHRLPV---GRKEP 864 (1023)
Q Consensus 794 i~~~i~~~l~~nv~~i~~~~~~~~~~~~---~pl~~~qll~~nli~d~l~~lal~-~--e~~~~~~m~~~P~---~~~~~ 864 (1023)
+.+.+.|.+++|++..++++++.+++++ +.++.+.+.++|++++.+|.+++| . +-|++.+++.|-. +++..
T Consensus 933 ~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~ 1012 (1178)
T PLN03190 933 MGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQE 1012 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCC
Confidence 9999999999999999999998887655 567899999999999999999987 2 3344444444332 45667
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcch
Q 042091 865 LITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKN 944 (1023)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n 944 (1023)
.++...++.|++.|+||+++++++.++.......+ .....++++++.++...+..+...+ .| +
T Consensus 1013 ~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~~-------~~~~~~~~~~~~v~~vnl~i~~~~~---------~w-t 1075 (1178)
T PLN03190 1013 AYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTID-------GSSIGDLWTLAVVILVNLHLAMDII---------RW-N 1075 (1178)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC-------ceeEhHhhhhHHHHHHHHHHHHHHh---------hh-h
Confidence 88887777889999999998887765533211111 1223455555555544444321111 11 1
Q ss_pred HHHHHHHHHHHHHHHHHH------HH---HHHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhcc
Q 042091 945 YLFMGIIGITCVLQIIII------EF---LGKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFVR 1012 (1023)
Q Consensus 945 ~~~~~~~~~~~~~~~~~v------~~---~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~ 1012 (1023)
|+-+.++.+++++.+++. +. .+.++.+ --++.+|+..+++.+++++++.++|++.+.+.|...+..+
T Consensus 1076 ~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~ 1151 (1178)
T PLN03190 1076 WITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAR 1151 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 211111222222221111 11 1112211 1267889999999999999999999999999998766543
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.7e-92 Score=839.92 Aligned_cols=548 Identities=24% Similarity=0.344 Sum_probs=447.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccC--CCcc-ccchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccccCceEE
Q 042091 142 EAWQDLTLIILIVAAIASLALGIKTE--GVEE-GWYDGASIAFAVFLVIVVTAIS----DYRQSLQFQNLNKEKRNIQLE 214 (1023)
Q Consensus 142 ~~~~~~~~~~ll~~ails~~~~~~~~--~~~~-~~~~~~~i~~~lll~~~v~~~~----~~~~~~~~~~l~~~~~~~~~~ 214 (1023)
.+|++|..++++++++++++++.+.+ +... .+++++.+++.+++..+++.++ ++|.+++.++|.+..++.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 57788999999999999998886532 1111 2245566777777766666665 678888889998877643565
Q ss_pred -EEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCC---CCeeeccceEeeccee
Q 042091 215 -AMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHK---TPFLMSGCKVADGVGT 290 (1023)
Q Consensus 215 -V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~---~~~l~aGt~v~~G~~~ 290 (1023)
|.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|.++ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999975 9999999999999999988 77 9999999999999
Q ss_pred EEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccc
Q 042091 291 MMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSV 370 (1023)
Q Consensus 291 ~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (1023)
++|+++|.+|++|++.+++++++.++||+|..+..+...+.. .++++++++..+ ..+.
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~~--~~~~--------------- 243 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYPL--AKFL--------------- 243 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHHH--Hhhc---------------
Confidence 999999999999999999999888999999776655433222 222222221111 0000
Q ss_pred cchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCcccccc
Q 042091 371 SDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 450 (1023)
Q Consensus 371 ~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~ 450 (1023)
++...+.++ +++++.+|||+||..++++++.++++|+|+|+++|+++++|+||++|++|||||||||+
T Consensus 244 -----~~~~~~~~~-------val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~ 311 (673)
T PRK14010 244 -----NFNLSIAML-------IALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311 (673)
T ss_pred -----cHHHHHHHH-------HHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCC
Confidence 012234444 78888899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccc
Q 042091 451 NEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRS 530 (1023)
Q Consensus 451 n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~ 530 (1023)
|++.+.++...+. .. ..+++..+..++. .+.||+++|+++++++.+.+....
T Consensus 312 Gn~~~~~~~~~~~----------~~--~~~ll~~a~~~~~--------------~s~~P~~~AIv~~a~~~~~~~~~~-- 363 (673)
T PRK14010 312 GNRMADAFIPVKS----------SS--FERLVKAAYESSI--------------ADDTPEGRSIVKLAYKQHIDLPQE-- 363 (673)
T ss_pred CCeEEEEEEeCCC----------cc--HHHHHHHHHHhcC--------------CCCChHHHHHHHHHHHcCCCchhh--
Confidence 8877776542110 01 1223333333321 135999999999998876543221
Q ss_pred cccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhh
Q 042091 531 ETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAI 610 (1023)
Q Consensus 531 ~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ 610 (1023)
..+.+||++++|+|++.++ + + .+.||+++.+++.|+. +|...+ ..+++..++++++|+|++++
T Consensus 364 ---~~~~~pF~~~~k~~gv~~~--g-~--~i~kGa~~~il~~~~~----~g~~~~-----~~~~~~~~~~a~~G~~~l~v 426 (673)
T PRK14010 364 ---VGEYIPFTAETRMSGVKFT--T-R--EVYKGAPNSMVKRVKE----AGGHIP-----VDLDALVKGVSKKGGTPLVV 426 (673)
T ss_pred ---hcceeccccccceeEEEEC--C-E--EEEECCHHHHHHHhhh----cCCCCc-----hHHHHHHHHHHhCCCeEEEE
Confidence 1235899999999998753 2 2 4569999999999985 222111 23566778899999999988
Q ss_pred hhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 611 AYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 611 ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
+ .|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 427 ~------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------- 481 (673)
T PRK14010 427 L------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------- 481 (673)
T ss_pred E------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-------------
Confidence 7 578999999999999999999999999999999999999999999999999997
Q ss_pred chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 691 g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
.+|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+
T Consensus 482 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 541 (673)
T PRK14010 482 -------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANL 541 (673)
T ss_pred -------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCE
Confidence 379999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 771 il~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
+++||||+.+++++++||++|.|+++++.|.++.|+..++..+..
T Consensus 542 VLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a 586 (673)
T PRK14010 542 IDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPA 586 (673)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHH
Confidence 999999999999999999999999999999999999877665543
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-92 Score=816.04 Aligned_cols=774 Identities=22% Similarity=0.299 Sum_probs=596.5
Q ss_pred CCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHH
Q 042091 106 EKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFL 185 (1023)
Q Consensus 106 ~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll 185 (1023)
..||+.. ++.+|+..||.|.+..+ .++.+.++.++--+|+.++..++.+++..-. ++|++.+|++.-..
T Consensus 158 ~~gL~~~--~~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQ--EIIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHH--HHHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 4699887 88999999999999976 5999999999999999999888766665443 56666666665555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecC-CCccCccEEEEeeCCeEEeeccccC
Q 042091 186 VIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRI-GDQVPADGVLVTGHSLAIDESSMTG 264 (1023)
Q Consensus 186 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~-Gd~VPaDgill~g~~l~VDES~LTG 264 (1023)
.++.+.++..++++.++++.+.. ..|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||||||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~~~--~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVKFT--CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccccC
Confidence 66777777788888888887664 58999999999999999999999999998 99999999999997 6999999999
Q ss_pred CCceeccCCC------------------CCeeeccceEee------cceeEEEEEEecccHHHHHHhhcccCCCCCChhH
Q 042091 265 ESKIVRKDHK------------------TPFLMSGCKVAD------GVGTMMVTGVGINTEWGLLMASISEDNGEETPLQ 320 (1023)
Q Consensus 265 ES~pv~K~~~------------------~~~l~aGt~v~~------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq 320 (1023)
||.|+.|.+- .+++|+||++++ |.+.+.|++||.+|..|++.+++..++. ++++
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP--~~fk 381 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP--VNFK 381 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC--cccH
Confidence 9999999762 368999999985 6699999999999999999999998653 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhcc
Q 042091 321 VRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVP 400 (1023)
Q Consensus 321 ~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP 400 (1023)
..-|.+..+.+. .++|++.|+..++.+.. +. . ..-.++..+ +-++.+.+|
T Consensus 382 fyrds~~fi~~l--~~ia~~gfiy~~i~l~~-~g-~-------------------~~~~iiirs-------LDliTi~VP 431 (1140)
T KOG0208|consen 382 FYRDSFKFILFL--VIIALIGFIYTAIVLNL-LG-V-------------------PLKTIIIRS-------LDLITIVVP 431 (1140)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhHhHHH-cC-C-------------------CHHHHhhhh-------hcEEEEecC
Confidence 333332222222 22233333332222211 10 0 034455555 888999999
Q ss_pred CchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCC-------CC--
Q 042091 401 EGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPD-------DS-- 471 (1023)
Q Consensus 401 ~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------~~-- 471 (1023)
++||.+.++...++.+||.|+|+.+-+++.+...|++|++|||||||||++.+.+-.+..-...-+... +.
T Consensus 432 PALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~ 511 (1140)
T KOG0208|consen 432 PALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQ 511 (1140)
T ss_pred CCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999987775321100000 00
Q ss_pred --Ccc--cH--HHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHc--------------C------CCh
Q 042091 472 --SQM--HS--IVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKL--------------G------MKF 525 (1023)
Q Consensus 472 --~~~--~~--~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~--------------g------~~~ 525 (1023)
..+ +. .....+..+++.||+.... + ....|||.|.-+.+..... + ++.
T Consensus 512 ~~~~l~~~~~~~~~~~~~~a~atCHSL~~v-~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p 585 (1140)
T KOG0208|consen 512 LFYKLSLRSSSLPMGNLVAAMATCHSLTLV-D-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRP 585 (1140)
T ss_pred ceeeccccccCCchHHHHHHHhhhceeEEe-C-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCC
Confidence 000 00 0112455677888854331 1 2567888888777643210 0 000
Q ss_pred -----hcccc----cccEEEEecCCCCCceEEEEEeecC-CeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHH
Q 042091 526 -----DRVRS----ETTVLHVFPFNSEKKRGGVAVKRIN-SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKA 595 (1023)
Q Consensus 526 -----~~~~~----~~~il~~~~F~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 595 (1023)
+...+ .+.+++.+||+|..+||||+++.++ ++..+|+|||||.|.+.|++- .++ +.+++
T Consensus 586 ~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--------tvP---~dy~e 654 (1140)
T KOG0208|consen 586 PENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--------TVP---ADYQE 654 (1140)
T ss_pred CcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--------cCC---ccHHH
Confidence 00001 4679999999999999999999763 578999999999999999852 111 56889
Q ss_pred HHHHHHhccchhhhhhhcccccc---------CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH
Q 042091 596 AVDEMAARSLRCVAIAYRFILDK---------WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT 666 (1023)
Q Consensus 596 ~~~~~a~~glr~l~~ayk~~~~~---------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 666 (1023)
.++.|+.+|+|++|+|+|++... ++..|.|++|+|++.|++++|++.+.+|++|++|.||++|+||||..|
T Consensus 655 vl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 655 VLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLT 734 (1140)
T ss_pred HHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchhe
Confidence 99999999999999999999543 466899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC--------------------------------------------------CCCCeeeechhhhc
Q 042091 667 AKAIALECGILGSDAE--------------------------------------------------ANDPNIIEGKVFRA 696 (1023)
Q Consensus 667 a~~ia~~~gi~~~~~~--------------------------------------------------~~~~~vi~g~~~~~ 696 (1023)
|..+||+||+..+... .+..++++|+.++-
T Consensus 735 aisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~ 814 (1140)
T KOG0208|consen 735 AISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQV 814 (1140)
T ss_pred eeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHH
Confidence 9999999999876531 11346788888776
Q ss_pred c---CHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCcccc
Q 042091 697 L---SDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 697 l---~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~ 773 (1023)
+ ..+.+++++.+..|||||+|.||.++|+.||+.|+.|+|+|||+||+.|||+||+||+++. ..|.-+|.+.-.
T Consensus 815 i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk 891 (1140)
T KOG0208|consen 815 ILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSK 891 (1140)
T ss_pred HHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccC
Confidence 4 4678889999999999999999999999999999999999999999999999999999973 235667899888
Q ss_pred CCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 042091 774 DDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHL 853 (1023)
Q Consensus 774 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~ 853 (1023)
-.+.+++.++|+|||+.+-.--..++|...|.++..+. +..+++...-++..|.++++++..++.|++++..+|.+.+
T Consensus 892 ~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFis--v~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L 969 (1140)
T KOG0208|consen 892 TPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFIS--VVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKL 969 (1140)
T ss_pred CCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHh--hheeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHh
Confidence 88999999999999999999999999988887764433 2234455678999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--c-cccccccccchhHHHHHHHHHHHHhhcccC
Q 042091 854 MHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLE--G-ERRQHASDVKNTMIFNAFVLSQIFNEFNAR 930 (1023)
Q Consensus 854 m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~-~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r 930 (1023)
-..||. ..+++.......++|.++..++-+.+++......... . ....+.....+|.+|..-.|..+++++...
T Consensus 970 ~~~rP~---~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S 1046 (1140)
T KOG0208|consen 970 FPKRPP---TNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS 1046 (1140)
T ss_pred cCCCCC---ccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec
Confidence 877773 5577777777777777766666655554432211111 0 001233456678888888888888876544
Q ss_pred CCCccceeecCcchHHHHHHHH
Q 042091 931 KPDEINVFTGVTKNYLFMGIIG 952 (1023)
Q Consensus 931 ~~~~~~~~~~~~~n~~~~~~~~ 952 (1023)
. ..++.+++|+|+.|...+.
T Consensus 1047 ~--g~pfr~pl~~n~~f~~~i~ 1066 (1140)
T KOG0208|consen 1047 K--GSPFRRPLWKNVLFKVFIT 1066 (1140)
T ss_pred c--CCcccCchhcCceeeeehh
Confidence 3 2445567889988765443
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.7e-91 Score=828.90 Aligned_cols=555 Identities=25% Similarity=0.353 Sum_probs=453.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC---C---CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEE
Q 042091 141 WEAWQDLTLIILIVAAIASLALGIKTE---G---VEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLE 214 (1023)
Q Consensus 141 ~~~~~~~~~~~ll~~ails~~~~~~~~---~---~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~ 214 (1023)
..+|+++..+++++++++++++++... + ....|..++.+++.+++..++++++++|.++++++|.+..+...++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 368899999999999999998876421 1 1123444455555555666778889999999999999987645799
Q ss_pred EEECCE-EEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCC--eeeccceEeecceeE
Q 042091 215 AMRGGK-AVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTP--FLMSGCKVADGVGTM 291 (1023)
Q Consensus 215 V~R~g~-~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~--~l~aGt~v~~G~~~~ 291 (1023)
|+|||+ +++|+++||+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|++++. .+|+||.|.+|.+++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 899999999999999999999999999999997 5999999999999999998643 499999999999999
Q ss_pred EEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccccccc
Q 042091 292 MVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVS 371 (1023)
Q Consensus 292 ~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (1023)
+|+++|.+|++|++.+++++++.++||+|..++.+...+..+.+++++.++. +.++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhCc------------------
Confidence 9999999999999999999998899999988887766655433322222111 1111110
Q ss_pred chHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccC
Q 042091 372 DAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLN 451 (1023)
Q Consensus 372 ~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n 451 (1023)
...+.++ +++++++|||+|+.+++.+...++++|+++|+++|+++++|+||++|+||||||||||+|
T Consensus 246 ------~~~l~~~-------iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g 312 (679)
T PRK01122 246 ------ALSITVL-------VALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLG 312 (679)
T ss_pred ------hHHHHHH-------HHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCC
Confidence 0134555 889999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHH-cCCChhcccc
Q 042091 452 EMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVK-LGMKFDRVRS 530 (1023)
Q Consensus 452 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~ 530 (1023)
+|++++++..+. ..+ .+++..+ +.++. .+.||.++|+++++++ .+... .+.
T Consensus 313 ~~~v~~~~~~~~----------~~~--~~ll~~a-~~~s~-------------~s~hP~~~AIv~~a~~~~~~~~--~~~ 364 (679)
T PRK01122 313 NRQASEFLPVPG----------VTE--EELADAA-QLSSL-------------ADETPEGRSIVVLAKQRFNLRE--RDL 364 (679)
T ss_pred cEEEEEEEeCCC----------CCH--HHHHHHH-HHhcC-------------CCCCchHHHHHHHHHhhcCCCc--hhh
Confidence 999998874321 111 1222222 22221 1358999999999886 34322 111
Q ss_pred cccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhh
Q 042091 531 ETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAI 610 (1023)
Q Consensus 531 ~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ 610 (1023)
.++..+.+||++++|+|++.+. + ..++||++|.+++.|.. +|... .+++++.+++++++|+|++++
T Consensus 365 ~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~-----~~~~~~~~~~~a~~G~~~l~v 430 (679)
T PRK01122 365 QSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF-----PAELDAAVDEVARKGGTPLVV 430 (679)
T ss_pred ccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC-----hHHHHHHHHHHHhCCCcEEEE
Confidence 2456788999999998888542 3 46899999999999964 22211 156777888999999999999
Q ss_pred hhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 611 AYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 611 ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
| .|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||+
T Consensus 431 a------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId------------- 485 (679)
T PRK01122 431 A------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------- 485 (679)
T ss_pred E------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-------------
Confidence 9 578999999999999999999999999999999999999999999999999996
Q ss_pred chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc
Q 042091 691 GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI 770 (1023)
Q Consensus 691 g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi 770 (1023)
.++||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+
T Consensus 486 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 545 (679)
T PRK01122 486 -------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNM 545 (679)
T ss_pred -------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCE
Confidence 379999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH----HHHHHHHHHHh
Q 042091 771 IILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA----ALLINVVAAIS 818 (1023)
Q Consensus 771 il~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~----~i~~~~~~~~~ 818 (1023)
+++||||+++++++++||++.-.--..-.|++. |-+ ++++.++...+
T Consensus 546 VLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~~ 596 (679)
T PRK01122 546 VDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMFAATY 596 (679)
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999776666778776 444 44444444333
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=7.1e-87 Score=793.26 Aligned_cols=546 Identities=25% Similarity=0.378 Sum_probs=450.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc--CC---Cccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCce
Q 042091 141 WEAWQDLTLIILIVAAIASLALGIKT--EG---VEEGWYDG---ASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQ 212 (1023)
Q Consensus 141 ~~~~~~~~~~~ll~~ails~~~~~~~--~~---~~~~~~~~---~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~ 212 (1023)
..||+++..+++++++++++++++.+ .+ ....||++ +.+++.+++..++++++++|.++++++|.+..++..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 36889999999999999999987642 11 11257875 334444566668888999999999999998876556
Q ss_pred EEEEE-CCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCC--eeeccceEeecce
Q 042091 213 LEAMR-GGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTP--FLMSGCKVADGVG 289 (1023)
Q Consensus 213 ~~V~R-~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~--~l~aGt~v~~G~~ 289 (1023)
++|+| ||++++|+++||+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|++++. .+|+||.|.+|.+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 999999999999999999999999999999999996 5999999999999999998864 3899999999999
Q ss_pred eEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccccccccc
Q 042091 290 TMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTS 369 (1023)
Q Consensus 290 ~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (1023)
+++|+++|.+|++|++++++++++.++||+|..++.+..++..+.+++. +.++.+..+.+
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~---~~~~~~~~~~~----------------- 245 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVT---ATLWPFAAYGG----------------- 245 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcC-----------------
Confidence 9999999999999999999999888899999888877655543322221 11111110000
Q ss_pred ccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccc
Q 042091 370 VSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLT 449 (1023)
Q Consensus 370 ~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT 449 (1023)
....+.++ +++++++|||+|+...+.....+++||+++|+++|+++++|+||++|++|||||||||
T Consensus 246 -------~~~~~~~l-------vallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT 311 (675)
T TIGR01497 246 -------NAISVTVL-------VALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTIT 311 (675)
T ss_pred -------hhHHHHHH-------HHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCccc
Confidence 01134445 8899999999888777777778999999999999999999999999999999999999
Q ss_pred cCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhccc
Q 042091 450 LNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVR 529 (1023)
Q Consensus 450 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~ 529 (1023)
+|+|++++++..+. .+. .+++.. .+.++. .+.||.++|+++++++.+.+....
T Consensus 312 ~g~~~v~~~~~~~~----------~~~--~~ll~~-aa~~~~-------------~s~hP~a~Aiv~~a~~~~~~~~~~- 364 (675)
T TIGR01497 312 LGNRLASEFIPAQG----------VDE--KTLADA-AQLASL-------------ADDTPEGKSIVILAKQLGIREDDV- 364 (675)
T ss_pred CCCeEEEEEEecCC----------CcH--HHHHHH-HHHhcC-------------CCCCcHHHHHHHHHHHcCCCcccc-
Confidence 99999998874211 011 122222 222211 136899999999998876543321
Q ss_pred ccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhh
Q 042091 530 SETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVA 609 (1023)
Q Consensus 530 ~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~ 609 (1023)
.++..+..||++++|++++.+. ++ ..++||++|.+++.|.. +|... .+++++.+++++++|+|+++
T Consensus 365 -~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~-----~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 365 -QSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHI-----PTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred -ccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCC-----cHHHHHHHHHHHhCCCeEEE
Confidence 2345678999999888876543 33 46889999999998863 22211 14577788899999999999
Q ss_pred hhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeee
Q 042091 610 IAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNII 689 (1023)
Q Consensus 610 ~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi 689 (1023)
+| .+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 431 va------------~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------ 486 (675)
T TIGR01497 431 VC------------EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------ 486 (675)
T ss_pred EE------------ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------
Confidence 99 456899999999999999999999999999999999999999999999999996
Q ss_pred echhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC
Q 042091 690 EGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD 769 (1023)
Q Consensus 690 ~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad 769 (1023)
.+++|++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||| +|+++++++||
T Consensus 487 --------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaad 545 (675)
T TIGR01497 487 --------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAAN 545 (675)
T ss_pred --------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCC
Confidence 378999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 042091 770 IIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807 (1023)
Q Consensus 770 iil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~ 807 (1023)
++++||||+++++++++||+++-+......|++..++.
T Consensus 546 ivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 546 MVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999999999999887665
No 21
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.5e-88 Score=826.21 Aligned_cols=847 Identities=20% Similarity=0.263 Sum_probs=621.6
Q ss_pred HHhhcCCCcCCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHH
Q 042091 119 RRNSFGSNTYPLKKGRSFL----NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISD 194 (1023)
Q Consensus 119 r~~~~G~N~~~~~~~~~~~----~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~ 194 (1023)
++..|-.|.+...| |+++ +.+++||++..|++|++.+++++++ +++. .++. .+++++++..+++++|
T Consensus 28 ~~~~~~~N~i~TtK-Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~----~~~~---~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTK-YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF----NPYT---TLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEe-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc----Cccc---eeeceeeeehHHHHHH
Confidence 44489999998765 5444 4579999999999999999999998 5432 2222 2334444444444444
Q ss_pred HHHHHHHHHHhccccCceEEEEECCE-EEEEEeccceeccEEEecCCCccCccEEEEeeCC----eEEeeccccCCCcee
Q 042091 195 YRQSLQFQNLNKEKRNIQLEAMRGGK-AVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS----LAIDESSMTGESKIV 269 (1023)
Q Consensus 195 ~~~~~~~~~l~~~~~~~~~~V~R~g~-~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGES~pv 269 (1023)
..++...++.+++.++.++.|.|++. +++..|++|+|||+|.+..++.+|||.+|++++. |+|++++|+||+..+
T Consensus 99 ~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred HHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 44444444445555567899998644 8999999999999999999999999999999764 999999999999887
Q ss_pred ccCC----------------------------------------------CCCeeeccceEeecc-eeEEEEEEecccHH
Q 042091 270 RKDH----------------------------------------------KTPFLMSGCKVADGV-GTMMVTGVGINTEW 302 (1023)
Q Consensus 270 ~K~~----------------------------------------------~~~~l~aGt~v~~G~-~~~~V~~tG~~T~~ 302 (1023)
.|.. .+++++.|+++.+.. +.+.|+.+|.+|
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt-- 256 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT-- 256 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc--
Confidence 7642 124678888888876 899999999999
Q ss_pred HHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHH
Q 042091 303 GLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVT 382 (1023)
Q Consensus 303 g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1023)
|++.+...+..+++++++.+|.....+..+.+.++++..+....+. ..+... .+ ..|+..... ........|.
T Consensus 257 -K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~-~~~~~~-~~-~~~~~~~~~---~~~~~~~~f~ 329 (1151)
T KOG0206|consen 257 -KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWT-RQDGRH-NG-EWWYLSPSE---AAYAGFVHFL 329 (1151)
T ss_pred -hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheee-eecccc-cC-chhhhcCch---HHHHHHHHHH
Confidence 5566666788899999999998877776666666655544432221 111111 11 233332221 1112222333
Q ss_pred HhhcchhhhhhhhhhhccCchhHHHHHHHHHHHH------HHH----hCCcccccchhhhhccCceeeeeCCccccccCc
Q 042091 383 IATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMR------KMM----ADKALVRRLSACETMGSATTICSDKTGTLTLNE 452 (1023)
Q Consensus 383 ~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~------~l~----~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~ 452 (1023)
.+ +.++...+|.+|...+.+.....+. .|. ...+.+|+.+..|+||++++|++|||||||+|.
T Consensus 330 t~-------~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~ 402 (1151)
T KOG0206|consen 330 TF-------IILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNS 402 (1151)
T ss_pred HH-------HhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccce
Confidence 34 7788889999999877776665552 233 346789999999999999999999999999999
Q ss_pred eEEEEEEeCCcccCCCCCC--------C----------c----------------ccHHHHHHHHHHHHccCCCcccccC
Q 042091 453 MTVVEAFIGRKKINPPDDS--------S----------Q----------------MHSIVIYLLSEGIAQNTTGNVFVPK 498 (1023)
Q Consensus 453 m~v~~~~~~~~~~~~~~~~--------~----------~----------------~~~~~~~ll~~~i~~~~~~~~~~~~ 498 (1023)
|++.+|.++|..|....+. . . ..+.....+..++++||+.....++
T Consensus 403 M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~ 482 (1151)
T KOG0206|consen 403 MEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDE 482 (1151)
T ss_pred eeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCC
Confidence 9999999998766532110 0 0 0112233456778889876553322
Q ss_pred CC-CceeecCChHHHHHHHHHHHcCCChhcc------------cccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCc
Q 042091 499 DG-EAVEVSGSPTEKAILSWAVKLGMKFDRV------------RSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGA 565 (1023)
Q Consensus 499 ~~-~~~~~~g~p~e~All~~a~~~g~~~~~~------------~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa 565 (1023)
++ ...+.+.+|+|.|+++.|+..|+.+..+ ...|+++++.+|+|.||||||+|+.+++++.+|||||
T Consensus 483 ~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGA 562 (1151)
T KOG0206|consen 483 DSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGA 562 (1151)
T ss_pred CccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCc
Confidence 22 4578899999999999999999876433 2378999999999999999999999999999999999
Q ss_pred hHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhccccccC-------------------------
Q 042091 566 AEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDKW------------------------- 619 (1023)
Q Consensus 566 ~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~~------------------------- 619 (1023)
+..|.+++.. + .+.. ++..+++++||.+|+||||+|||.+++++
T Consensus 563 DsvI~erL~~----~------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ 632 (1151)
T KOG0206|consen 563 DSVIFERLSK----N------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEV 632 (1151)
T ss_pred chhhHhhhhh----c------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHH
Confidence 9999999975 1 1222 77888999999999999999999995321
Q ss_pred -CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC----------------
Q 042091 620 -TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---------------- 682 (1023)
Q Consensus 620 -~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---------------- 682 (1023)
+.+|+||+++|.+++||++++||+++|+.|++||||+||+|||..+||.+||..|++...+..
T Consensus 633 ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~ 712 (1151)
T KOG0206|consen 633 AEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLD 712 (1151)
T ss_pred HHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchh
Confidence 457999999999999999999999999999999999999999999999999999999876431
Q ss_pred --------------------------CCCCeeeechhhhccCHH-HHH---HHHh--hceEeccCCHhhHHHHHHHHHhC
Q 042091 683 --------------------------ANDPNIIEGKVFRALSDK-ERE---KVAQ--EITVMGRSSPNDKLLLVQALRKG 730 (1023)
Q Consensus 683 --------------------------~~~~~vi~g~~~~~l~~~-~~~---~~~~--~~~v~ar~~P~~K~~iV~~lq~~ 730 (1023)
...+++++|+.+....++ +.. ++.. +..++||++|.||+.+|+..++.
T Consensus 713 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~ 792 (1151)
T KOG0206|consen 713 ATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKG 792 (1151)
T ss_pred hHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhc
Confidence 146789999998764433 322 2222 34799999999999999999854
Q ss_pred -CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 042091 731 -GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809 (1023)
Q Consensus 731 -g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i 809 (1023)
+.++++||||+||++|+++|||||++++.+...|..+||+.+....|.....++ +||+.|.|+.+++.|.+++|+...
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~ 871 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFT 871 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999776666667999999999965555544444 499999999999999999999999
Q ss_pred HHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHHhc--cCCCCccccccCCC----CCCCCCcchHHHHHHHHHHHH
Q 042091 810 LINVVAAISSG---DVPLNAVQLLWVNLIMDTLGALALA--TEPPTDHLMHRLPV----GRKEPLITNIMWRNLIVQALY 880 (1023)
Q Consensus 810 ~~~~~~~~~~~---~~pl~~~qll~~nli~d~l~~lal~--~e~~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~~~~ 880 (1023)
++.|++.++++ ...+.++++.++|++++.+|.+++| ....+.+.+.+.|. +++...+++..++.+++.++|
T Consensus 872 ~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~ 951 (1151)
T KOG0206|consen 872 FTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFY 951 (1151)
T ss_pred HHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHH
Confidence 99999988754 5688999999999999999999998 23444455555553 455667787777788999999
Q ss_pred HHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHhhcccCCCCccceeecCcchHHHHHHHHHHHHHHHH
Q 042091 881 QVTVLLVLNFKGTSILHLEGERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINVFTGVTKNYLFMGIIGITCVLQII 960 (1023)
Q Consensus 881 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 960 (1023)
|+++++++.+...+......++.........+.+|+.+|+...+......+. | .|.|++++ ..++++.++
T Consensus 952 ~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~y-----w--T~i~~i~i---~gSi~~~f~ 1021 (1151)
T KOG0206|consen 952 QSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSY-----W--TWINHIVI---WGSILLWFV 1021 (1151)
T ss_pred hheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehh-----e--eHHHHHHH---HHHHHHHHH
Confidence 9999987766543211111111111234445556665554433332111110 0 12233322 222222222
Q ss_pred HHHHHHH-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhhc
Q 042091 961 IIEFLGK-------------FTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIPVPKTPLAVYFV 1011 (1023)
Q Consensus 961 ~v~~~~~-------------~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~ 1011 (1023)
+..+.+. ++...--++.+|+.+++..+++++++.++|.+.+...|...+.-
T Consensus 1022 f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1022 FLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 2211111 11111136678999999999999999999999999999886643
No 22
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-85 Score=731.02 Aligned_cols=808 Identities=23% Similarity=0.334 Sum_probs=615.6
Q ss_pred HHhhcCCCcCCCCC--CCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 042091 119 RRNSFGSNTYPLKK--GRSFL-NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDY 195 (1023)
Q Consensus 119 r~~~~G~N~~~~~~--~~~~~-~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~ 195 (1023)
++++|-+|.+...| ..+|. ..+++||+-..++++++.+..++++.+... ....|+.+ ..+++++..+-+++.|+
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig-~l~ty~~p--l~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIG-YLSTYWGP--LGFVLTITLIKEAVDDL 151 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheec-chhhhhHH--HHHHHHHHHHHHHHHHH
Confidence 45568899887655 33444 346899999999999998888887766432 22222222 22333334456788888
Q ss_pred HHHHHHHHHhccccCceEEEE-ECCEEEEEEeccceeccEEEecCCCccCccEEEEeeC----CeEEeeccccCCCceec
Q 042091 196 RQSLQFQNLNKEKRNIQLEAM-RGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGH----SLAIDESSMTGESKIVR 270 (1023)
Q Consensus 196 ~~~~~~~~l~~~~~~~~~~V~-R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~----~l~VDES~LTGES~pv~ 270 (1023)
++.+..+.++.++ .+++ |+|...+ ++++|++||+|.+..+++||||.+++..+ +|.|-+..|+||++.+.
T Consensus 152 ~r~~rd~~~Nse~----y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 152 KRRRRDRELNSEK----YTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHhhhhhhhhh----heeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 8877777666554 2444 8887666 99999999999999999999999999853 37999999999997665
Q ss_pred cCC----------------------------------------------CCCeeeccceEeecceeEEEEEEecccHHHH
Q 042091 271 KDH----------------------------------------------KTPFLMSGCKVADGVGTMMVTGVGINTEWGL 304 (1023)
Q Consensus 271 K~~----------------------------------------------~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~ 304 (1023)
|-+ -+|.++++|.+.+|.+.++|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 532 14679999999999999999999999953
Q ss_pred HHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042091 305 LMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIA 384 (1023)
Q Consensus 305 i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 384 (1023)
.| +...++.+.--++..+|.+.+.++...++++++..+. .|.. ..|+ ..+...
T Consensus 305 vM-Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~------~g~~------~~wy--------------i~~~Rf 357 (1051)
T KOG0210|consen 305 VM-NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM------KGFG------SDWY--------------IYIIRF 357 (1051)
T ss_pred Hh-ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh------hcCC------CchH--------------HHHHHH
Confidence 33 4445566666778889999998877666655443221 1111 1232 122222
Q ss_pred hcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhC----CcccccchhhhhccCceeeeeCCccccccCceEEEEEEe
Q 042091 385 TNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMAD----KALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFI 460 (1023)
Q Consensus 385 ~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~ 460 (1023)
+.++-..+|..|-..+.++...-...+.++ |.+||....-|+||++.++.+|||||||+|+|.+++++.
T Consensus 358 -------llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHL 430 (1051)
T KOG0210|consen 358 -------LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHL 430 (1051)
T ss_pred -------HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeee
Confidence 556667799999998888888777777765 567999999999999999999999999999999999998
Q ss_pred CCcccCCCC-------------------------CCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHH
Q 042091 461 GRKKINPPD-------------------------DSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAIL 515 (1023)
Q Consensus 461 ~~~~~~~~~-------------------------~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All 515 (1023)
+.-.|+.+. .....+..+.++ ..+++.||+.....+++|+..|+..+|+|.|++
T Consensus 431 GTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~-V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiV 509 (1051)
T KOG0210|consen 431 GTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNA-VLALALCHNVTPVFEDDGEVSYQAASPDEVAIV 509 (1051)
T ss_pred eeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHH-HHHHHHhccCCcccCCCceEEeecCCCCeEEEE
Confidence 754443210 011223333333 356777777666666667888999999999999
Q ss_pred HHHHHcCCChhccc-------------ccccEEEEecCCCCCceEEEEEeec-CCeEEEEEeCchHHHHHhhccccccCC
Q 042091 516 SWAVKLGMKFDRVR-------------SETTVLHVFPFNSEKKRGGVAVKRI-NSEVHVHWKGAAEMILASCTKYLDTDG 581 (1023)
Q Consensus 516 ~~a~~~g~~~~~~~-------------~~~~il~~~~F~s~~k~msviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~ 581 (1023)
+|.+..|+.+..+. .+|+|+++|||+|+.||||++|+.+ .+++..|.|||+-.|....+.
T Consensus 510 kwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~------ 583 (1051)
T KOG0210|consen 510 KWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY------ 583 (1051)
T ss_pred EeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc------
Confidence 99998887654332 2689999999999999999999987 688999999999887654321
Q ss_pred ccccCCchHHHHHHHHHHHHhccchhhhhhhccccccC---------------------------CCCCCCcEEEeeeec
Q 042091 582 QLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKW---------------------------TLPEEELILLAIVGI 634 (1023)
Q Consensus 582 ~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~---------------------------~~~e~~l~~lG~i~~ 634 (1023)
+ ++.++....||++|+|++.+|.|.+++++ ...|.|+.++|+.|.
T Consensus 584 -----N---dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGV 655 (1051)
T KOG0210|consen 584 -----N---DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGV 655 (1051)
T ss_pred -----c---hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccCh
Confidence 1 57788889999999999999999984321 135899999999999
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC-----------------------CCCCeeeec
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE-----------------------ANDPNIIEG 691 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-----------------------~~~~~vi~g 691 (1023)
||+++++++.+++.||+|||+|||+|||..+||..||+..++...+.. .+.+++++|
T Consensus 656 EDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G 735 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDG 735 (1051)
T ss_pred HHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcC
Confidence 999999999999999999999999999999999999999999987652 467899999
Q ss_pred hhhhcc---CHHHHHHHHhhc--eEeccCCHhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHH
Q 042091 692 KVFRAL---SDKEREKVAQEI--TVMGRSSPNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAK 765 (1023)
Q Consensus 692 ~~~~~l---~~~~~~~~~~~~--~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak 765 (1023)
+.++-. -++|+.++..++ .|+|||+|+||+++++.+|++ |..|+++|||.||+.|+++||+||++-.+....|.
T Consensus 736 ~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQAS 815 (1051)
T KOG0210|consen 736 ESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQAS 815 (1051)
T ss_pred chHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccc
Confidence 988753 356777766654 689999999999999999987 99999999999999999999999966444455688
Q ss_pred hccCccccCCChhHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH---HHHHHHHHHHHHHHH
Q 042091 766 ENSDIIILDDNFASVVKVVRW-GRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNA---VQLLWVNLIMDTLGA 841 (1023)
Q Consensus 766 ~~adiil~~~~~~~i~~~i~~-gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~---~qll~~nli~d~l~~ 841 (1023)
-+||+.+. .|+.+.+++-| ||..|+|-.+.-+|.+...++...++.++.....+.|..- +.|.-+..+++++|.
T Consensus 816 LAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPV 893 (1051)
T KOG0210|consen 816 LAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPV 893 (1051)
T ss_pred hhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhh
Confidence 99999998 79999999744 9999999999999999999998888888877766665544 446678889999999
Q ss_pred HHhccCC-CCccccccCC-------CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccchhH
Q 042091 842 LALATEP-PTDHLMHRLP-------VGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEGERRQHASDVKNTM 913 (1023)
Q Consensus 842 lal~~e~-~~~~~m~~~P-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~t~ 913 (1023)
+++..+. .++++-...| .+|.-++.++..| .+.++||+.++++..+.-. . .......++
T Consensus 894 FSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw---vLISiYQG~vim~g~~~l~---~-------~ef~~ivai 960 (1051)
T KOG0210|consen 894 FSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW---VLISIYQGSVIMYGALLLF---D-------TEFIHIVAI 960 (1051)
T ss_pred heeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh---hhHHHHcccHHHHHHHHHh---h-------hhheEeeee
Confidence 9998654 2333333333 3444455554444 7789999988876543311 1 112344567
Q ss_pred HHHHHHHHHHHhhc-ccCCCCccceeecCcchHHHHHHHHHHHHHHHHHHHHHHHcccCCC-CCHHHHHHHHHHHHHHHH
Q 042091 914 IFNAFVLSQIFNEF-NARKPDEINVFTGVTKNYLFMGIIGITCVLQIIIIEFLGKFTKTVK-LDWKLWLASIGIGLFSWP 991 (1023)
Q Consensus 914 ~f~~~v~~~~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~w~~~~~~~~~~~~ 991 (1023)
.|+++++..+.... ..++ .+|+.+.+-++++++.++.+++++++|.... ++|.+.+...++.+++++
T Consensus 961 sFtaLi~tELiMVaLtv~t-----------w~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~L 1029 (1051)
T KOG0210|consen 961 SFTALILTELIMVALTVRT-----------WHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCL 1029 (1051)
T ss_pred eeHHHHHHHHHHHhhhhhh-----------hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888777765532 2222 2566666777888888888999999887654 467777777888889999
Q ss_pred HHHHhhhccCCCCCchhhhc
Q 042091 992 LAVLGKMIPVPKTPLAVYFV 1011 (1023)
Q Consensus 992 ~~~~~k~~~~~~~p~~~~~~ 1011 (1023)
+-++.|+++|+..|.++...
T Consensus 1030 pl~~~K~lrrk~sPpSYaKl 1049 (1051)
T KOG0210|consen 1030 PLYFIKALRRKLSPPSYAKL 1049 (1051)
T ss_pred HHHHHHHHHhhcCCcchhhc
Confidence 99999999999999886543
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-85 Score=736.85 Aligned_cols=850 Identities=19% Similarity=0.241 Sum_probs=618.5
Q ss_pred hhhhccccccccccchhhHHHHHHHHhhhhhhhcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHH
Q 042091 58 LVLNASRRFRYTLDLKKEEEKEKRRRMIRAHAQVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFL 137 (1023)
Q Consensus 58 ~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~ 137 (1023)
.|-+++.||-|+++.+++...+..-+ +.++... . .+|.. ++.++..-+.+||.|++..+ .++|.
T Consensus 126 ~F~Fqk~ry~~~~e~~~F~~~~fp~~-----------~~~g~~~-k--~~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~ 189 (1160)
T KOG0209|consen 126 FFEFQKKRYLYDEEKGKFSRLTFPTD-----------EPFGYFQ-K--STGHE-EESEIKLAKHKYGKNKFDIV-VPTFS 189 (1160)
T ss_pred EEEEEEeeEEEcccccceeccccCcC-----------Ccchhhh-h--ccCcc-hHHHHHHHHHHhcCCccccC-CccHH
Confidence 47888999999998877765544322 1122223 3 35877 44578777788999999976 68999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhccccCceEE
Q 042091 138 NFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTA---ISDYRQSLQFQNLNKEKRNIQLE 214 (1023)
Q Consensus 138 ~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~---~~~~~~~~~~~~l~~~~~~~~~~ 214 (1023)
++|.+....|+++++.+|..+++.- +.||.++..+ ++++ .+++ .++.+.-+.++++... +..+.
T Consensus 190 eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySlFtL--fMli-~fE~tlV~Qrm~~lse~R~Mg~k--py~I~ 256 (1160)
T KOG0209|consen 190 ELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSLFTL--FMLI-AFEATLVKQRMRTLSEFRTMGNK--PYTIN 256 (1160)
T ss_pred HHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHhcCCC--ceEEE
Confidence 9999999999999999998888755 3788864333 3333 3333 3444444555555433 36899
Q ss_pred EEECCEEEEEEeccceeccEEEecC---CCccCccEEEEeeCCeEEeeccccCCCceeccCC----------------CC
Q 042091 215 AMRGGKAVKISIFDVVVGEIVPLRI---GDQVPADGVLVTGHSLAIDESSMTGESKIVRKDH----------------KT 275 (1023)
Q Consensus 215 V~R~g~~~~I~~~dLv~GDIV~l~~---Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~----------------~~ 275 (1023)
|+|+++|+.+.++||+|||+|.+.. ...||||.+|+.|+ |.||||||||||.|..|.+ +.
T Consensus 257 v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~ 335 (1160)
T KOG0209|consen 257 VYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKL 335 (1160)
T ss_pred EEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhhcCCCccccccccccCChhhhcccccccce
Confidence 9999999999999999999999987 67899999999997 6999999999999999975 23
Q ss_pred CeeeccceEe-------------ecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 276 PFLMSGCKVA-------------DGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAFLVL 342 (1023)
Q Consensus 276 ~~l~aGt~v~-------------~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~ 342 (1023)
+++|+||+++ +|.+.+.|++||.+|..|++++.+-...++.|. |+...++++ +.+++|
T Consensus 336 hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa-----Nn~Etf~FI----LFLlVF 406 (1160)
T KOG0209|consen 336 HVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA-----NNRETFIFI----LFLLVF 406 (1160)
T ss_pred EEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee-----ccHHHHHHH----HHHHHH
Confidence 5899999987 678999999999999999999999887766554 444444333 345556
Q ss_pred HHHHHHHhhccc-cCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHHhC
Q 042091 343 AVLLVRFFTGHT-TKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMMAD 421 (1023)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~ 421 (1023)
++...+|.|-.. .++. .. -.+.|.-+ +.|+...+|+.||+-++++...+...++|.
T Consensus 407 AiaAa~Yvwv~Gskd~~-Rs---------------rYKL~LeC-------~LIlTSVvPpELPmELSmAVNsSL~ALak~ 463 (1160)
T KOG0209|consen 407 AIAAAGYVWVEGSKDPT-RS---------------RYKLFLEC-------TLILTSVVPPELPMELSMAVNSSLIALAKL 463 (1160)
T ss_pred HHHhhheEEEecccCcc-hh---------------hhheeeee-------eEEEeccCCCCCchhhhHHHHHHHHHHHHh
Confidence 666555654332 2221 11 23444444 778888999999999999999999999999
Q ss_pred CcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCC
Q 042091 422 KALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGE 501 (1023)
Q Consensus 422 ~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~ 501 (1023)
++.|..+-.+.-.|++|++|||||||||+..|.|..+--....-......+..+.+.. ..+++||+-.. .+ +
T Consensus 464 ~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~----~vlAscHsLv~-le-~-- 535 (1160)
T KOG0209|consen 464 GVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETV----LVLASCHSLVL-LE-D-- 535 (1160)
T ss_pred ceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHH----HHHHHHHHHHH-hc-C--
Confidence 9999999999999999999999999999999999887531111111111112222222 34556665322 22 1
Q ss_pred ceeecCChHHHHHHHHHHHcCCChhc------cc---ccccEEEEecCCCCCceEEEEEeecC----CeEEEEEeCchHH
Q 042091 502 AVEVSGSPTEKAILSWAVKLGMKFDR------VR---SETTVLHVFPFNSEKKRGGVAVKRIN----SEVHVHWKGAAEM 568 (1023)
Q Consensus 502 ~~~~~g~p~e~All~~a~~~g~~~~~------~~---~~~~il~~~~F~s~~k~msviv~~~~----~~~~~~~KGa~e~ 568 (1023)
...|||.|+|.+++.. .+.+. .+ ...+|.+.+.|+|+.|||+|++...+ .++.+.+|||||.
T Consensus 536 --~lVGDPlEKA~l~~v~---W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEv 610 (1160)
T KOG0209|consen 536 --KLVGDPLEKATLEAVG---WNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEV 610 (1160)
T ss_pred --cccCChHHHHHHHhcC---cccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHH
Confidence 3789999999998753 21111 11 14678999999999999999987653 3688999999999
Q ss_pred HHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhcccc---------ccCCCCCCCcEEEeeeeccCCCc
Q 042091 569 ILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFIL---------DKWTLPEEELILLAIVGIKDPCR 639 (1023)
Q Consensus 569 il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~---------~~~~~~e~~l~~lG~i~~~D~lr 639 (1023)
|..+..... +.+++...+|+++|.||+|++||++. -+++..|+||+|.|++.|..|+|
T Consensus 611 i~~ml~dvP-------------~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK 677 (1160)
T KOG0209|consen 611 IQEMLRDVP-------------KDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLK 677 (1160)
T ss_pred HHHHHHhCc-------------hhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCC
Confidence 988866431 56888899999999999999999994 24577899999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC------------------------------------CC
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA------------------------------------EA 683 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~------------------------------------~~ 683 (1023)
+|++++|+.|++.+++++|+||||+.||.++|+++||..... ..
T Consensus 678 ~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~ 757 (1160)
T KOG0209|consen 678 PDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAE 757 (1160)
T ss_pred ccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhh
Confidence 999999999999999999999999999999999999976411 02
Q ss_pred CCCeeeechhhhccCH-HHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCH
Q 042091 684 NDPNIIEGKVFRALSD-KEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE 762 (1023)
Q Consensus 684 ~~~~vi~g~~~~~l~~-~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~ 762 (1023)
.++++++|..++.+.. +++.++++++.||||+.|.||..++..+++.|+.++|+|||+||+.|||+||||||+- ++++
T Consensus 758 ~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~ 836 (1160)
T KOG0209|consen 758 THDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPE 836 (1160)
T ss_pred hhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCCh
Confidence 3467889999988643 4788999999999999999999999999999999999999999999999999999985 3332
Q ss_pred H-----------------------------------------------------------------------HHhccCcc
Q 042091 763 V-----------------------------------------------------------------------AKENSDII 771 (1023)
Q Consensus 763 ~-----------------------------------------------------------------------ak~~adii 771 (1023)
. |.-+|.+.
T Consensus 837 e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFT 916 (1160)
T KOG0209|consen 837 ESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFT 916 (1160)
T ss_pred hhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccc
Confidence 0 01123333
Q ss_pred ccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHhccCCCCc
Q 042091 772 ILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTD 851 (1023)
Q Consensus 772 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~ 851 (1023)
-.-.+.+++.++|+.||++.-+.-|.+.. +.-|..... .-++.++.-..-++..|...--+++. ...+.+...+|-+
T Consensus 917 sK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisA-YslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLe 993 (1160)
T KOG0209|consen 917 SKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISA-YSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLE 993 (1160)
T ss_pred cccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHH-HHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchh
Confidence 33336889999999999999887766554 233332211 12334445557788888877776654 3456777889999
Q ss_pred cccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhcccc-ccc--cccccccccchhHHHHHHHHHHHHhh-c
Q 042091 852 HLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILH-LEG--ERRQHASDVKNTMIFNAFVLSQIFNE-F 927 (1023)
Q Consensus 852 ~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~--~~~~~~~~~~~t~~f~~~v~~~~~~~-~ 927 (1023)
.+-+..|. .+++|..+...++.|...+...++++.-.....-+ ... ..........+|.+|..-...|+... .
T Consensus 994 tLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAV 1070 (1160)
T KOG0209|consen 994 TLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAV 1070 (1160)
T ss_pred hHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhh
Confidence 99888884 56888777777888888877766655433221111 000 11233456678888877777777653 3
Q ss_pred ccCCCCccceeecCcchHHHHHHHHHHHHHHHHHH----HHHHHcccCCCCCHHHHHHH----HHHHHHHHHHHHHhhhc
Q 042091 928 NARKPDEINVFTGVTKNYLFMGIIGITCVLQIIII----EFLGKFTKTVKLDWKLWLAS----IGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 928 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~w~~~----~~~~~~~~~~~~~~k~~ 999 (1023)
|-+ ..++...+..|+.++.+++++..+.+..+ +=++..|.+++++-.+-... ++--+++|+++.+.|++
T Consensus 1071 NY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1071 NYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred hcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 34566678889877776665544333332 44677888888874332222 22234567777777776
Q ss_pred cCCCCC
Q 042091 1000 PVPKTP 1005 (1023)
Q Consensus 1000 ~~~~~p 1005 (1023)
-...+|
T Consensus 1148 f~~~k~ 1153 (1160)
T KOG0209|consen 1148 FGDHKP 1153 (1160)
T ss_pred ccCCCc
Confidence 554443
No 24
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-84 Score=767.86 Aligned_cols=509 Identities=29% Similarity=0.404 Sum_probs=433.9
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCceEEEEE-CCEEEEEEeccceeccEEEecCCCccCccEEE
Q 042091 172 GWYDGASIAFAVFLV-IVVTAISDYRQSLQFQNLNKEKRNIQLEAMR-GGKAVKISIFDVVVGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R-~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgil 249 (1023)
.||+...++++++++ -+++.....|..++.++|.+..+ ..+++++ ||++++|+++||+|||+|.|+|||+||+||++
T Consensus 172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p-~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V 250 (713)
T COG2217 172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAP-KTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVV 250 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEE
Confidence 566766665555544 47788888888888999988876 5776665 66699999999999999999999999999999
Q ss_pred EeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHH
Q 042091 250 VTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATF 329 (1023)
Q Consensus 250 l~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 329 (1023)
++|++ .||||+|||||.|+.|.+++. +++||.+.+|..+++|+++|.+|.+++|++++++++..++|.|+.+|+++.+
T Consensus 251 ~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~ 328 (713)
T COG2217 251 VSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASY 328 (713)
T ss_pred EeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHc
Confidence 99998 999999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHH
Q 042091 330 IGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTL 409 (1023)
Q Consensus 330 i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~ 409 (1023)
+++..+++++++|++|.+. +. . ++...+..+ +++++++|||+|.+++|+
T Consensus 329 fvp~vl~ia~l~f~~w~~~---~~--~-------------------~~~~a~~~a-------~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 329 FVPVVLVIAALTFALWPLF---GG--G-------------------DWETALYRA-------LAVLVIACPCALGLATPT 377 (713)
T ss_pred cHHHHHHHHHHHHHHHHHh---cC--C-------------------cHHHHHHHH-------HhheeeeCccHHHhHHHH
Confidence 9999999998888854322 11 0 134566667 999999999999999999
Q ss_pred HHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHcc
Q 042091 410 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQN 489 (1023)
Q Consensus 410 ~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~ 489 (1023)
++..++.+.+++|+++|+..++|.++++|+++||||||||+|+|+|+++...+. + .++++.+ +.+.
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------e~~~L~l---aAal- 443 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------EDELLAL---AAAL- 443 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------HHHHHHH---HHHH-
Confidence 999999999999999999999999999999999999999999999999875422 0 1223322 2211
Q ss_pred CCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHH
Q 042091 490 TTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMI 569 (1023)
Q Consensus 490 ~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i 569 (1023)
+..|.||+.+|+++++...+.. ... ..+.+ ...|+..+.++..+.+ |++..+
T Consensus 444 -------------E~~S~HPiA~AIv~~a~~~~~~--~~~----~~~~i------~G~Gv~~~v~g~~v~v---G~~~~~ 495 (713)
T COG2217 444 -------------EQHSEHPLAKAIVKAAAERGLP--DVE----DFEEI------PGRGVEAEVDGERVLV---GNARLL 495 (713)
T ss_pred -------------HhcCCChHHHHHHHHHHhcCCC--Ccc----ceeee------ccCcEEEEECCEEEEE---cCHHHH
Confidence 1357899999999998876621 111 12222 2556766655544444 988776
Q ss_pred HHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHH
Q 042091 570 LASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLC 649 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l 649 (1023)
.+.-.. .+ . ..+..+.+..+|..++.++ .|..++|++++.|++||+++++|++|
T Consensus 496 ~~~~~~----------~~---~-~~~~~~~~~~~G~t~v~va------------~dg~~~g~i~~~D~~R~~a~~aI~~L 549 (713)
T COG2217 496 GEEGID----------LP---L-LSERIEALESEGKTVVFVA------------VDGKLVGVIALADELRPDAKEAIAAL 549 (713)
T ss_pred hhcCCC----------cc---c-hhhhHHHHHhcCCeEEEEE------------ECCEEEEEEEEeCCCChhHHHHHHHH
Confidence 432110 01 1 3455677788898878888 66799999999999999999999999
Q ss_pred HhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh
Q 042091 650 RDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK 729 (1023)
Q Consensus 650 ~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 729 (1023)
|+.|++++|+||||..+|+++|+++||+ .+++.+.|+||.++|+.||+
T Consensus 550 ~~~Gi~~~mLTGDn~~~A~~iA~~lGId--------------------------------~v~AellPedK~~~V~~l~~ 597 (713)
T COG2217 550 KALGIKVVMLTGDNRRTAEAIAKELGID--------------------------------EVRAELLPEDKAEIVRELQA 597 (713)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcChH--------------------------------hheccCCcHHHHHHHHHHHh
Confidence 9999999999999999999999999997 47899999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 042091 730 GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809 (1023)
Q Consensus 730 ~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i 809 (1023)
+|++|+|+|||+||+|||++|||||||| +|+|+|+++||+++++|++..++++++.+|+++++|++|+.|++.||++.+
T Consensus 598 ~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~i 676 (713)
T COG2217 598 EGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676 (713)
T ss_pred cCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 042091 810 LINVVA 815 (1023)
Q Consensus 810 ~~~~~~ 815 (1023)
+++.++
T Consensus 677 plA~~g 682 (713)
T COG2217 677 PLAAGG 682 (713)
T ss_pred HHHHHh
Confidence 988776
No 25
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-84 Score=714.78 Aligned_cols=659 Identities=24% Similarity=0.377 Sum_probs=521.4
Q ss_pred CCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcc
Q 042091 92 IRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEE 171 (1023)
Q Consensus 92 ~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~ 171 (1023)
++++++-+.|...- .||+++ |+++|+++||.|++.+++...+.+|+-- +-+|..+..-.+|++...+.- ..|.+.
T Consensus 21 ~p~eeVfeeL~~t~-~GLt~~--E~~eRlk~fG~NkleEkken~~lKFl~F-m~~PlswVMEaAAimA~~Lan-g~~~~~ 95 (942)
T KOG0205|consen 21 IPIEEVFEELLCTR-EGLTSD--EVEERLKIFGPNKLEEKKESKFLKFLGF-MWNPLSWVMEAAAIMAIGLAN-GGGRPP 95 (942)
T ss_pred CchhhhHHHHhcCC-CCCchH--HHHHHHHhhCchhhhhhhhhHHHHHHHH-HhchHHHHHHHHHHHHHHHhc-CCCCCc
Confidence 34677776665543 499998 8999999999999998776666666533 334445555566666554321 234556
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~ 251 (1023)
.|.|.+.|...++++..++.++|+.+......|.+... .+..|+|||+|.++.+.+||||||+.++.||+|||||+|++
T Consensus 96 DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~ 174 (942)
T KOG0205|consen 96 DWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLE 174 (942)
T ss_pred chhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccccccCceeeeccCCEecCccceec
Confidence 89999888888888889999999999999888887664 68899999999999999999999999999999999999999
Q ss_pred eCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHH
Q 042091 252 GHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIG 331 (1023)
Q Consensus 252 g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 331 (1023)
|+-|+||+|.|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|..|+-..++.. ....-.+|+-++.+..+..
T Consensus 175 gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci 252 (942)
T KOG0205|consen 175 GDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCI 252 (942)
T ss_pred CCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHH
Confidence 9999999999999999999999998 9999999999999999999999999999988876 6677889999998887654
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhh-hhccCchhHHHHHH
Q 042091 332 IVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVV-VAVPEGLPLAVTLT 410 (1023)
Q Consensus 332 ~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv-~~iP~~L~lav~~~ 410 (1023)
.. +++.+++-++.+ ++ ..+- ..+..... +.+++ -.+|.+||..++.+
T Consensus 253 ~s-i~~g~lie~~vm-y~-~q~R----------------------~~r~~i~n-------LlvllIGgiPiamPtVlsvT 300 (942)
T KOG0205|consen 253 CS-IALGMLIEITVM-YP-IQHR----------------------LYRDGIDN-------LLVLLIGGIPIAMPTVLSVT 300 (942)
T ss_pred HH-HHHHHHHHHHhh-hh-hhhh----------------------hhhhhhhh-------eheeeecccccccceeeeeh
Confidence 42 222222222211 22 2110 11111111 33444 44999999999999
Q ss_pred HHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEE--E--EeCCcccCCCCCCCcccHHHHHHHHHHH
Q 042091 411 LAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE--A--FIGRKKINPPDDSSQMHSIVIYLLSEGI 486 (1023)
Q Consensus 411 l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~ll~~~i 486 (1023)
++.+..+|+++|+++++.+|+|.|+.+|++|+|||||||.|+++|.+ + +..| .+++.. +|..+.
T Consensus 301 MAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g-----------v~~D~~-~L~A~r 368 (942)
T KOG0205|consen 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG-----------VDKDDV-LLTAAR 368 (942)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-----------CChHHH-HHHHHH
Confidence 99999999999999999999999999999999999999999999987 2 2221 122211 222333
Q ss_pred HccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCch
Q 042091 487 AQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAA 566 (1023)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~ 566 (1023)
+. .. ...|.+|.|++....+ ..+.+..++.++..|||+..||-...+..++|+.+-..||||
T Consensus 369 As----r~----------en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAP 430 (942)
T KOG0205|consen 369 AS----RK----------ENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAP 430 (942)
T ss_pred Hh----hh----------cChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCCh
Confidence 22 11 1247899999987543 467788999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCC-CCCCcEEEeeeeccCCCcccHHHH
Q 042091 567 EMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTL-PEEELILLAIVGIKDPCRPGVKDA 645 (1023)
Q Consensus 567 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~-~e~~l~~lG~i~~~D~lr~~~~~~ 645 (1023)
|.|++.|..- .+-.+.+.+.+++||++|+|-+++||+...+++++ ......|+|+.-+-||||.+..++
T Consensus 431 eqil~l~~~~----------~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~t 500 (942)
T KOG0205|consen 431 EQILKLCNED----------HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAET 500 (942)
T ss_pred HHHHHHhhcc----------CcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHH
Confidence 9999999752 11127788999999999999999999998776654 445678999999999999999999
Q ss_pred HHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh-hhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 646 VKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV-FRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 646 I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~-~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
|++....|++|.|+|||...-++..++++|+-+..-.. . .+-|.. =..+...+.++++++..=||.+.|+||.++|
T Consensus 501 irral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyps-s--~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV 577 (942)
T KOG0205|consen 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-S--ALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIV 577 (942)
T ss_pred HHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCc-h--hhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHH
Confidence 99999999999999999999999999999987532210 0 011111 0123333556777777889999999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 042091 725 QALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTV 804 (1023)
Q Consensus 725 ~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ 804 (1023)
+.||++|+.|+|+|||+||+|+||.||+|||+. .++|.|+.+||+|++...++.+..++..+|.+|++++.+..|.+..
T Consensus 578 ~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsi 656 (942)
T KOG0205|consen 578 KILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 656 (942)
T ss_pred HHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999998777
Q ss_pred HHHHHHHHHHHHHhcCCCchhHHHHHHHHHH
Q 042091 805 NVAALLINVVAAISSGDVPLNAVQLLWVNLI 835 (1023)
Q Consensus 805 nv~~i~~~~~~~~~~~~~pl~~~qll~~nli 835 (1023)
.+-.++ .|.....-...-|+|...+++-++
T Consensus 657 tiriv~-gfml~alIw~~df~pfmvliiail 686 (942)
T KOG0205|consen 657 TIRIVF-GFMLIALIWEFDFSPFMVLIIAIL 686 (942)
T ss_pred HHHHHH-HHHHHHHHHHhcCCHHHHHHHHHh
Confidence 665442 222222222233455555544443
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.5e-78 Score=742.46 Aligned_cols=514 Identities=25% Similarity=0.340 Sum_probs=435.9
Q ss_pred HHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceecc
Q 042091 154 VAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGE 233 (1023)
Q Consensus 154 ~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GD 233 (1023)
++++.+++.+ .|.+++.+++++++..+++.+.+.|..+..++|.+..+ ..++|+|||++++|++++|+|||
T Consensus 195 ~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p-~~a~vir~g~~~~v~~~~l~~GD 265 (741)
T PRK11033 195 VAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVP-ETATRLRDGEREEVAIADLRPGD 265 (741)
T ss_pred HHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEECCEEEEEEHHHCCCCC
Confidence 4455555554 46777666666666668888889999999999988876 68999999999999999999999
Q ss_pred EEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCC
Q 042091 234 IVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDN 313 (1023)
Q Consensus 234 IV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 313 (1023)
+|.|++||+|||||+|++|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|+|.+++++++
T Consensus 266 iv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~ 343 (741)
T PRK11033 266 VIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAE 343 (741)
T ss_pred EEEECCCCEEecceEEEECcE-EeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhh
Confidence 999999999999999999975 999999999999999999987 999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhh
Q 042091 314 GEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVT 393 (1023)
Q Consensus 314 ~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ 393 (1023)
.+++|+|+.+++++.+++++.+++++++++++...+ +. + +...+..+ ++
T Consensus 344 ~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~--~~---~-------------------~~~~i~~a-------~s 392 (741)
T PRK11033 344 ERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF--AA---P-------------------WQEWIYRG-------LT 392 (741)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cC---C-------------------HHHHHHHH-------HH
Confidence 999999999999999999999999988887753221 10 0 33445556 89
Q ss_pred hhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCc
Q 042091 394 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQ 473 (1023)
Q Consensus 394 ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~ 473 (1023)
+++++|||+|.+++|+++..++.+++|+|+++|+.+++|+|+++|++|||||||||+|+|+|.++...+.
T Consensus 393 vlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------- 462 (741)
T PRK11033 393 LLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG---------- 462 (741)
T ss_pred HHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred ccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceE---EEE
Q 042091 474 MHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRG---GVA 550 (1023)
Q Consensus 474 ~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~m---svi 550 (1023)
..++ +++..+.+. +..+.||+++|+++++.+.+.+ +||.++++.+ ++.
T Consensus 463 ~~~~--~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~ 513 (741)
T PRK11033 463 ISES--ELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIE 513 (741)
T ss_pred CCHH--HHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEE
Confidence 1111 122211111 1236799999999999876643 3455555543 444
Q ss_pred EeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe
Q 042091 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630 (1023)
Q Consensus 551 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG 630 (1023)
...++..+. -|+++.+.+ ++ +++.+.++.+..+|+|++++| .|.+++|
T Consensus 514 ~~~~g~~~~---ig~~~~~~~--------------~~---~~~~~~~~~~~~~g~~~v~va------------~~~~~~g 561 (741)
T PRK11033 514 GQVNGERVL---ICAPGKLPP--------------LA---DAFAGQINELESAGKTVVLVL------------RNDDVLG 561 (741)
T ss_pred EEECCEEEE---Eecchhhhh--------------cc---HHHHHHHHHHHhCCCEEEEEE------------ECCEEEE
Confidence 343444333 388876532 11 234556778899999999999 4678999
Q ss_pred eeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+++++|++|||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 562 ~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------------- 608 (741)
T PRK11033 562 LIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------------- 608 (741)
T ss_pred EEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------------
Confidence 99999999999999999999999999999999999999999999996
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSV 790 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~ 790 (1023)
.+++.+|+||.++|+.+|+. +.|+|+|||.||+|||++|||||||| ++++.++++||+++.++++..+..++++||++
T Consensus 609 ~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~ 686 (741)
T PRK11033 609 FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRAT 686 (741)
T ss_pred eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHH
Confidence 25678999999999999965 58999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 791 FANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 791 ~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
++||++|+.|++.||++.+++.+++
T Consensus 687 ~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 687 HANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988887654
No 27
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-79 Score=706.20 Aligned_cols=565 Identities=25% Similarity=0.324 Sum_probs=455.6
Q ss_pred ccccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccCceEEEEECCE-EEEEEeccceeccEEEecCCCccCccE
Q 042091 170 EEGWYDGASIAFAVFLVI-VVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGK-AVKISIFDVVVGEIVPLRIGDQVPADG 247 (1023)
Q Consensus 170 ~~~~~~~~~i~~~lll~~-~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~-~~~I~~~dLv~GDIV~l~~Gd~VPaDg 247 (1023)
+..+||...|++.++.+. +++....++....+.+|....+ .++.++.+|+ .++|+.+.|++||+|.|+||++||+||
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p-~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG 415 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAP-SKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDG 415 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCc-ccceEeecCCcceEeeeeeeccCCEEEECCCCcccccc
Confidence 557888877777665543 7777777777788888888775 6888888886 899999999999999999999999999
Q ss_pred EEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHH
Q 042091 248 VLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVA 327 (1023)
Q Consensus 248 ill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~ 327 (1023)
++++|++ +||||++|||+.||.|++++. +.+||.+.+|...+.+|++|.+|.+++|.+++++++..++|+|+.+|+++
T Consensus 416 ~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia 493 (951)
T KOG0207|consen 416 VVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIA 493 (951)
T ss_pred EEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhh
Confidence 9999987 999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHH
Q 042091 328 TFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAV 407 (1023)
Q Consensus 328 ~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav 407 (1023)
.+++++.+++++.++++|.+...+... .+ ..+...+...|..+ +++++++|||+|.+++
T Consensus 494 ~yFvP~Vi~lS~~t~~~w~~~g~~~~~-~~-------------~~~~~~~~~a~~~a-------isVlviACPCaLgLAT 552 (951)
T KOG0207|consen 494 GYFVPVVIVLSLATFVVWILIGKIVFK-YP-------------RSFFDAFSHAFQLA-------ISVLVIACPCALGLAT 552 (951)
T ss_pred hcCCchhhHHHHHHHHHHHHHcccccc-Cc-------------chhhHHHHHHHHhh-------heEEEEECchhhhcCC
Confidence 999999999999999988764432110 00 01112345555666 9999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHH
Q 042091 408 TLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIA 487 (1023)
Q Consensus 408 ~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~ 487 (1023)
|++...+....+++|+|+|..+++|.+.++++++||||||||+|+++|.++....... ...+.+.+. .+.
T Consensus 553 PtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~--------~~~e~l~~v-~a~- 622 (951)
T KOG0207|consen 553 PTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI--------SLKEALALV-AAM- 622 (951)
T ss_pred ceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc--------cHHHHHHHH-HHH-
Confidence 9999999999999999999999999999999999999999999999999987643310 011122211 111
Q ss_pred ccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchH
Q 042091 488 QNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAE 567 (1023)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e 567 (1023)
+..+.||+.+|++++|+..... .+...++....|..+.+. +-++..+.++. -|.-+
T Consensus 623 ---------------Es~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~pg~g~~--~~~~~~~~~i~---iGN~~ 678 (951)
T KOG0207|consen 623 ---------------ESGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYFPGEGIY--VTVTVDGNEVL---IGNKE 678 (951)
T ss_pred ---------------hcCCcCchHHHHHHHHHhcccc----cCccccceeecccCCCcc--cceEEeeeEEe---echHH
Confidence 1336799999999999976511 111122233333333322 33333444433 37777
Q ss_pred HHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHH
Q 042091 568 MILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVK 647 (1023)
Q Consensus 568 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~ 647 (1023)
.+... |... + +++++.+++...+|..+.+++ -|.++.|+++++|++|||+..+|+
T Consensus 679 ~~~r~--------~~~~--~---~~i~~~~~~~e~~g~tvv~v~------------vn~~l~gv~~l~D~vr~~a~~av~ 733 (951)
T KOG0207|consen 679 WMSRN--------GCSI--P---DDILDALTESERKGQTVVYVA------------VNGQLVGVFALEDQVRPDAALAVA 733 (951)
T ss_pred HHHhc--------CCCC--c---hhHHHhhhhHhhcCceEEEEE------------ECCEEEEEEEeccccchhHHHHHH
Confidence 65432 2211 1 457788888889999999998 678999999999999999999999
Q ss_pred HHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHH
Q 042091 648 LCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQAL 727 (1023)
Q Consensus 648 ~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l 727 (1023)
.||+.|++++|+||||..+|.++|+++|+. .|+|...|+||.++|+.+
T Consensus 734 ~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------------~V~aev~P~~K~~~Ik~l 781 (951)
T KOG0207|consen 734 ELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------------NVYAEVLPEQKAEKIKEI 781 (951)
T ss_pred HHHhcCceEEEEcCCCHHHHHHHHHhhCcc--------------------------------eEEeccCchhhHHHHHHH
Confidence 999999999999999999999999999976 589999999999999999
Q ss_pred HhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 042091 728 RKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVA 807 (1023)
Q Consensus 728 q~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~ 807 (1023)
|++++.|+|+|||+||+|||.+|||||+|| .|+++|.++||++++++++..++.+++.+|++.+|||.|+.|+++||++
T Consensus 782 q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~ 860 (951)
T KOG0207|consen 782 QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLV 860 (951)
T ss_pred HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CCchhHHHHHHHHHHHHHHHHHHhc-cCCCC
Q 042091 808 ALLINVVAAISSG--DVPLNAVQLLWVNLIMDTLGALALA-TEPPT 850 (1023)
Q Consensus 808 ~i~~~~~~~~~~~--~~pl~~~qll~~nli~d~l~~lal~-~e~~~ 850 (1023)
.++++....+-.+ -.|.-+.-....+.+--.+.++.|= +.+|+
T Consensus 861 ~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 861 GIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred hhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9988654433333 1233333333334433334444443 45554
No 28
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.2e-76 Score=706.82 Aligned_cols=492 Identities=37% Similarity=0.547 Sum_probs=429.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-ccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeec
Q 042091 182 AVFLVIVVTAISDYRQSLQFQNLNKE-KRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDES 260 (1023)
Q Consensus 182 ~lll~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES 260 (1023)
++++..+++.+.+++.++..+++.+. .++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 44566678889999999999998872 334789999999 999999999999999999999999999999996 699999
Q ss_pred cccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHH-HHHHHHHHHHHH
Q 042091 261 SMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVA-TFIGIVGLAVAF 339 (1023)
Q Consensus 261 ~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~-~~i~~~~l~~a~ 339 (1023)
+|||||.|+.|.+++. +++||.+.+|...+.|+.+|.+|..+++...+.++...++|++++.++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887 99999999999999999999999999999999887777899999999999 677777777776
Q ss_pred HHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 042091 340 LVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMM 419 (1023)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~ 419 (1023)
++++++..++... + ++...+..+ +++++++|||+||+++++++..+..+|+
T Consensus 162 ~~~~~~~~~~~~~---~-------------------~~~~~~~~~-------~~vl~~~~P~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 162 AVFLFWAIGLWDP---N-------------------SIFKIFLRA-------LILLVIAIPIALPLAVTIALAVGDARLA 212 (499)
T ss_pred HHHHHHHHHHccc---c-------------------cHHHHHHHH-------HHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 6666554321100 0 134556666 9999999999999999999999999999
Q ss_pred hCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCC
Q 042091 420 ADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKD 499 (1023)
Q Consensus 420 ~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~ 499 (1023)
++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.
T Consensus 213 ~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------ 256 (499)
T TIGR01494 213 KKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------ 256 (499)
T ss_pred HCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC------------------------------------
Confidence 99999999999999999999999999999999999999875321
Q ss_pred CCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhcccccc
Q 042091 500 GEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDT 579 (1023)
Q Consensus 500 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 579 (1023)
++.++||+|+|++++++..+ ++..||++.+++|+++++.+++ .++||+++.+.+.|..
T Consensus 257 ---~~~s~hp~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---- 314 (499)
T TIGR01494 257 ---EYLSGHPDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---- 314 (499)
T ss_pred ---CcCCCChHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH----
Confidence 12367999999999886421 2568999999999999875333 3689999999998853
Q ss_pred CCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEE
Q 042091 580 DGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMV 659 (1023)
Q Consensus 580 ~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~ml 659 (1023)
+.+.+++++.+|+|++++||+ .+++|+++++|++|++++++|+.|+++|++++|+
T Consensus 315 -------------~~~~~~~~~~~g~~~~~~a~~------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~l 369 (499)
T TIGR01494 315 -------------LEEKVKELAQSGLRVLAVASK------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIML 369 (499)
T ss_pred -------------HHHHHHHHHhCCCEEEEEEEC------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEE
Confidence 122344677899999999954 3799999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 042091 660 TGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGD 739 (1023)
Q Consensus 660 TGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGD 739 (1023)
|||+..+|..+|+++|+ +++++|+||.++|+.+|++|+.|+|+||
T Consensus 370 tGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 370 TGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred cCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 99999999999999987 3789999999999999999999999999
Q ss_pred CccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 042091 740 GTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALLINVVAAISS 819 (1023)
Q Consensus 740 G~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i~~~~~~~~~~ 819 (1023)
|.||+|||++|||||+|| |+++||++++++++..+..++++||++++++++++.|.+++|++.+++++++.+
T Consensus 415 g~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~-- 486 (499)
T TIGR01494 415 GVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV-- 486 (499)
T ss_pred ChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999997 689999999999999999999999999999999999999999998888776442
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHH
Q 042091 820 GDVPLNAVQLLWVNLIMDTLGALA 843 (1023)
Q Consensus 820 ~~~pl~~~qll~~nli~d~l~~la 843 (1023)
+|+++++.++++
T Consensus 487 ------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ------------LNLVPPGLAALA 498 (499)
T ss_pred ------------HHHHhcchhhhc
Confidence 778888776653
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=9.8e-75 Score=694.06 Aligned_cols=498 Identities=27% Similarity=0.399 Sum_probs=418.9
Q ss_pred cccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccCceEEEEEC-CEEEEEEeccceeccEEEecCCCccCccEE
Q 042091 171 EGWYDGASIAFAVFLVI-VVTAISDYRQSLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADGV 248 (1023)
Q Consensus 171 ~~~~~~~~i~~~lll~~-~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgi 248 (1023)
+.||+++++++++++.. +++...+++.++..++|.+..+ .+++|+|+ |++++|++++|+|||+|.|++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p-~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQP-STATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 47888887766665554 7787888888888888887765 67888875 777999999999999999999999999999
Q ss_pred EEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHH
Q 042091 249 LVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVAT 328 (1023)
Q Consensus 249 ll~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~ 328 (1023)
+++|++ .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|++.+++.+++.+++|+|+.+++++.
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~ 207 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAG 207 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcCCCCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999986 999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHH
Q 042091 329 FIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVT 408 (1023)
Q Consensus 329 ~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~ 408 (1023)
++.++.++++++++++|. ..+..+ +++++++|||+|++++|
T Consensus 208 ~~~~~v~~~a~~~~~~~~--------------------------------~~~~~~-------~svlvvacPcaL~la~p 248 (562)
T TIGR01511 208 YFVPVVIAIALITFVIWL--------------------------------FALEFA-------VTVLIIACPCALGLATP 248 (562)
T ss_pred HHHHHHHHHHHHHHHHHH--------------------------------HHHHHH-------HHHHHHhccchhhhHHH
Confidence 999988887777665532 123344 89999999999999999
Q ss_pred HHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHc
Q 042091 409 LTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQ 488 (1023)
Q Consensus 409 ~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~ 488 (1023)
+++..++.+++++|+++|+++++|+|+++|+||||||||||+|+|+|.++...+. . ..++++.+ +.+.
T Consensus 249 ~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-~--------~~~~~l~~---aa~~ 316 (562)
T TIGR01511 249 TVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD-R--------DRTELLAL---AAAL 316 (562)
T ss_pred HHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC-C--------CHHHHHHH---HHHH
Confidence 9999999999999999999999999999999999999999999999999865321 0 01222222 1111
Q ss_pred cCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHH
Q 042091 489 NTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEM 568 (1023)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~ 568 (1023)
+..+.||+++|+++++++.+....... -.+.. ...++....++.++ ..|+++.
T Consensus 317 --------------e~~s~HPia~Ai~~~~~~~~~~~~~~~----~~~~~------~g~Gi~~~~~g~~~---~iG~~~~ 369 (562)
T TIGR01511 317 --------------EAGSEHPLAKAIVSYAKEKGITLVEVS----DFKAI------PGIGVEGTVEGTKI---QLGNEKL 369 (562)
T ss_pred --------------hccCCChHHHHHHHHHHhcCCCcCCCC----CeEEE------CCceEEEEECCEEE---EEECHHH
Confidence 123579999999999987765432111 11111 23345445445443 4588887
Q ss_pred HHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHH
Q 042091 569 ILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKL 648 (1023)
Q Consensus 569 il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~ 648 (1023)
+.+. +. .++ ++..+|.+++.++ .|.+++|++.++|++||+++++|+.
T Consensus 370 ~~~~--------~~--~~~-----------~~~~~g~~~~~~~------------~~~~~~g~~~~~d~l~~~a~e~i~~ 416 (562)
T TIGR01511 370 LGEN--------AI--KID-----------GKAEQGSTSVLVA------------VNGELAGVFALEDQLRPEAKEVIQA 416 (562)
T ss_pred HHhC--------CC--CCC-----------hhhhCCCEEEEEE------------ECCEEEEEEEecccccHHHHHHHHH
Confidence 5331 11 011 1235788888877 6789999999999999999999999
Q ss_pred HHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHH
Q 042091 649 CRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALR 728 (1023)
Q Consensus 649 l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq 728 (1023)
|++.|++++|+|||+..++.++++++||. ++++..|++|.++++.++
T Consensus 417 Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K~~~v~~l~ 463 (562)
T TIGR01511 417 LKRRGIEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDKAALIKELQ 463 (562)
T ss_pred HHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHHHHHHHHHH
Confidence 99999999999999999999999999994 467889999999999999
Q ss_pred hCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 042091 729 KGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAA 808 (1023)
Q Consensus 729 ~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~ 808 (1023)
++++.|+|+|||.||++|+++||+||+|| .+++.+++.||+++.++++..+.+++++||+++++|++|+.|++.||++.
T Consensus 464 ~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~ 542 (562)
T TIGR01511 464 EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIA 542 (562)
T ss_pred HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHH
Q 042091 809 LLINVVAA 816 (1023)
Q Consensus 809 i~~~~~~~ 816 (1023)
+++++.+.
T Consensus 543 i~la~~~~ 550 (562)
T TIGR01511 543 IPIAAGVL 550 (562)
T ss_pred HHHHHhhh
Confidence 88776444
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=8.4e-75 Score=697.02 Aligned_cols=523 Identities=29% Similarity=0.422 Sum_probs=432.3
Q ss_pred HHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECC-EEEEEEecccee
Q 042091 153 IVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGG-KAVKISIFDVVV 231 (1023)
Q Consensus 153 l~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g-~~~~I~~~dLv~ 231 (1023)
.++++++++.+ .|.++..+++++++..+++.+++++.++..++|.+..+ ..++|+||| ++++|+++||+|
T Consensus 6 ~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~-~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 6 ALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAP-STARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCCeEEEEEHHHCCC
Confidence 34455555555 56777777777777778899999999999999987765 689999995 999999999999
Q ss_pred ccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhccc
Q 042091 232 GEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISE 311 (1023)
Q Consensus 232 GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 311 (1023)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|++|++.+.+.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCE-EeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999999985 999999999999999999886 9999999999999999999999999999999988
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhh
Q 042091 312 DNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQ 391 (1023)
Q Consensus 312 ~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 391 (1023)
+..+++|+|+.+++++.++.++.++++++++++++.. +. . ..+..+
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~---~~-----------------------~-~~~~~~------- 200 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---GA-----------------------L-GALYRA------- 200 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cc-----------------------c-hHHHHH-------
Confidence 8888999999999999999999888888877765321 11 0 234455
Q ss_pred hhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCC
Q 042091 392 VTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDS 471 (1023)
Q Consensus 392 v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 471 (1023)
+++++++|||+||+++|++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..++..
T Consensus 201 ~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~------ 274 (556)
T TIGR01525 201 LAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS------ 274 (556)
T ss_pred HHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC------
Confidence 89999999999999999999999999999999999999999999999999999999999999999987643210
Q ss_pred CcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEE
Q 042091 472 SQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAV 551 (1023)
Q Consensus 472 ~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv 551 (1023)
...++++.+ +... +..+.||+++|+++++++.+.+... . + -.+.+| ..++..
T Consensus 275 -~~~~~~l~~---a~~~--------------e~~~~hp~~~Ai~~~~~~~~~~~~~--~-~-~~~~~~------~~gi~~ 326 (556)
T TIGR01525 275 -ISEEELLAL---AAAL--------------EQSSSHPLARAIVRYAKKRGLELPK--Q-E-DVEEVP------GKGVEA 326 (556)
T ss_pred -ccHHHHHHH---HHHH--------------hccCCChHHHHHHHHHHhcCCCccc--c-c-CeeEec------CCeEEE
Confidence 001222221 1110 1235799999999999887654321 0 0 011111 112222
Q ss_pred eecC-CeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe
Q 042091 552 KRIN-SEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630 (1023)
Q Consensus 552 ~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG 630 (1023)
..++ .++ ..|+++.+ + .++. + .+++++.++.++.+|+|++.++ .|.+++|
T Consensus 327 ~~~g~~~~---~lg~~~~~-~-------~~~~----~--~~~~~~~~~~~~~~g~~~~~v~------------~~~~~~g 377 (556)
T TIGR01525 327 TVDGQEEV---RIGNPRLL-E-------LAAE----P--ISASPDLLNEGESQGKTVVFVA------------VDGELLG 377 (556)
T ss_pred EECCeeEE---EEecHHHH-h-------hcCC----C--chhhHHHHHHHhhCCcEEEEEE------------ECCEEEE
Confidence 2222 122 23666544 1 0110 0 1223455667888999999998 5679999
Q ss_pred eeeccCCCcccHHHHHHHHHhCC-CEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAG-VKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
.+.++|++|||++++++.|+++| +++.|+|||+..++.++++++|+.
T Consensus 378 ~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-------------------------------- 425 (556)
T TIGR01525 378 VIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-------------------------------- 425 (556)
T ss_pred EEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--------------------------------
Confidence 99999999999999999999999 999999999999999999999996
Q ss_pred eEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHH
Q 042091 710 TVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRS 789 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~ 789 (1023)
.+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|+++| ++++.+++.||+++.+++++.+.+++++||+
T Consensus 426 ~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~ 504 (556)
T TIGR01525 426 EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRK 504 (556)
T ss_pred eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 042091 790 VFANIQKFIQFQLTVNVAALLINVVAA 816 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~nv~~i~~~~~~~ 816 (1023)
+++||++++.|++.||++.+++++.+.
T Consensus 505 ~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 505 TRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988776554
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.1e-74 Score=687.71 Aligned_cols=505 Identities=27% Similarity=0.385 Sum_probs=425.6
Q ss_pred HHHHHHHHHHHhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccce
Q 042091 151 ILIVAAIASLALGIKTEGVEEGWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVV 230 (1023)
Q Consensus 151 ~ll~~ails~~~~~~~~~~~~~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv 230 (1023)
++.++++++++.+ .|+++..+++++++..+++.++++++++..++|.+..+ .+++|+|||+++++++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~-~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAP-DTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCEEEEEEHHHCC
Confidence 3445566666665 68999777777777778999999999999999988765 68999999999999999999
Q ss_pred eccEEEecCCCccCccEEEEeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcc
Q 042091 231 VGEIVPLRIGDQVPADGVLVTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASIS 310 (1023)
Q Consensus 231 ~GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 310 (1023)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|++|++.+++.
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~ 152 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCE-EEeeeEECCceEEEEEEEeccccHHHHHHHHHH
Confidence 999999999999999999999975 999999999999999999886 999999999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhh
Q 042091 311 EDNGEETPLQVRLNGVATFIGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAI 390 (1023)
Q Consensus 311 ~~~~~~t~lq~~l~~~~~~i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 390 (1023)
++..+++|+|+.+++++.++.++.+++++++++++.. .+. ....+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~------ 200 (536)
T TIGR01512 153 EAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LKR-----------------------WPFWVYRA------ 200 (536)
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-----------------------cHHHHHHH------
Confidence 8888899999999999999999888877766654421 110 01144455
Q ss_pred hhhhhhhhccCchhHHHHHHHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCC
Q 042091 391 QVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDD 470 (1023)
Q Consensus 391 ~v~ilv~~iP~~L~lav~~~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 470 (1023)
+++++++|||+||+++|+++..+++++.++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 201 -~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------- 270 (536)
T TIGR01512 201 -LVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------- 270 (536)
T ss_pred -HHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------
Confidence 8999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred CCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEE
Q 042091 471 SSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVA 550 (1023)
Q Consensus 471 ~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msvi 550 (1023)
+++..+.+. +..+.||+++|+++++.+.+ .+. -.+..| ..++.
T Consensus 271 ---------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~~-------~~~~~~------g~gi~ 313 (536)
T TIGR01512 271 ---------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NVE-------SVEEVP------GEGVR 313 (536)
T ss_pred ---------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CCc-------ceEEec------CCeEE
Confidence 222222111 12357999999999988654 111 112222 22333
Q ss_pred EeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe
Q 042091 551 VKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA 630 (1023)
Q Consensus 551 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG 630 (1023)
...++.++. .|+++.+.+. +. ..+..+|.+++.++ .|..++|
T Consensus 314 ~~~~g~~~~---ig~~~~~~~~--------~~---------------~~~~~~~~~~~~v~------------~~~~~~g 355 (536)
T TIGR01512 314 AVVDGGEVR---IGNPRSLEAA--------VG---------------ARPESAGKTIVHVA------------RDGTYLG 355 (536)
T ss_pred EEECCeEEE---EcCHHHHhhc--------CC---------------cchhhCCCeEEEEE------------ECCEEEE
Confidence 333444433 4877654221 00 03445677776666 6789999
Q ss_pred eeeccCCCcccHHHHHHHHHhCCC-EEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhc
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAGV-KVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
.+.++|++|||++++|+.|+++|+ ++.|+|||+..++..+++++|+..
T Consensus 356 ~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------------------- 404 (536)
T TIGR01512 356 YILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------------------- 404 (536)
T ss_pred EEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------------------------
Confidence 999999999999999999999999 999999999999999999999963
Q ss_pred eEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHH
Q 042091 710 TVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRS 789 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~ 789 (1023)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+|++||.++++.++++||+++.++++..+.+++++||+
T Consensus 405 -~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~ 483 (536)
T TIGR01512 405 -VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR 483 (536)
T ss_pred -hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999966899999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHH
Q 042091 790 VFANIQKFIQFQLTVNVAALLINVVA 815 (1023)
Q Consensus 790 ~~~~i~~~i~~~l~~nv~~i~~~~~~ 815 (1023)
+++|+++|+.|++.||++.+++++++
T Consensus 484 ~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 484 TRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998887765
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.2e-73 Score=716.38 Aligned_cols=510 Identities=25% Similarity=0.342 Sum_probs=428.0
Q ss_pred cccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEE
Q 042091 171 EGWYDGASIAFAVFLV-IVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 171 ~~~~~~~~i~~~lll~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgil 249 (1023)
+.||+.+++++++++. -+++...+.+..+..++|.+..+ ..++|+|||++++|+.++|+|||+|.|++||+|||||+|
T Consensus 283 ~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p-~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v 361 (834)
T PRK10671 283 HLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTP-PTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEI 361 (834)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEE
Confidence 4588876666555444 47888888888888899988776 689999999999999999999999999999999999999
Q ss_pred EeeCCeEEeeccccCCCceeccCCCCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHH
Q 042091 250 VTGHSLAIDESSMTGESKIVRKDHKTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATF 329 (1023)
Q Consensus 250 l~g~~l~VDES~LTGES~pv~K~~~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 329 (1023)
++|+ ..||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|++.+++++++..++|+|+.+++++.+
T Consensus 362 ~~g~-~~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 362 TQGE-AWLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EEce-EEEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 9997 4999999999999999999986 9999999999999999999999999999999999888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHH
Q 042091 330 IGIVGLAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTL 409 (1023)
Q Consensus 330 i~~~~l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~ 409 (1023)
++++.++++++++++|++ .+.. . .+...+..+ +++++++|||+|++++|+
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~~~--~------------------~~~~~~~~a-------~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FGPA--P------------------QIVYTLVIA-------TTVLIIACPCALGLATPM 489 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCc--h------------------HHHHHHHHH-------HHHHHHhcccchhhhHHH
Confidence 999888888877776532 1110 0 133445566 999999999999999999
Q ss_pred HHHHHHHHHHhCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHcc
Q 042091 410 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQN 489 (1023)
Q Consensus 410 ~l~~~~~~l~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~ 489 (1023)
++..++.+++++|+++|+++++|+++++|++|||||||||+|+|+|.++...+. ..+ .+++..+.+.+
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----------~~~--~~~l~~a~~~e 557 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG----------VDE--AQALRLAAALE 557 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC----------CCH--HHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998764321 111 12222222211
Q ss_pred CCCcccccCCCCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHH
Q 042091 490 TTGNVFVPKDGEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMI 569 (1023)
Q Consensus 490 ~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i 569 (1023)
..+.||+++|+++++..... .. ..+|+... ..++....++.. +++|+++.+
T Consensus 558 --------------~~s~hp~a~Ai~~~~~~~~~--~~---------~~~~~~~~-g~Gv~~~~~g~~---~~~G~~~~~ 608 (834)
T PRK10671 558 --------------QGSSHPLARAILDKAGDMTL--PQ---------VNGFRTLR-GLGVSGEAEGHA---LLLGNQALL 608 (834)
T ss_pred --------------CCCCCHHHHHHHHHHhhCCC--CC---------cccceEec-ceEEEEEECCEE---EEEeCHHHH
Confidence 23579999999998764321 11 12233222 234443333332 356999876
Q ss_pred HHhhccccccCCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHH
Q 042091 570 LASCTKYLDTDGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLC 649 (1023)
Q Consensus 570 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l 649 (1023)
.+.. ++ .+.+.+.++.++.+|.+++.++ .|..++|++++.|++||+++++|+.|
T Consensus 609 ~~~~------------~~--~~~~~~~~~~~~~~g~~~v~va------------~~~~~~g~~~l~d~~r~~a~~~i~~L 662 (834)
T PRK10671 609 NEQQ------------VD--TKALEAEITAQASQGATPVLLA------------VDGKAAALLAIRDPLRSDSVAALQRL 662 (834)
T ss_pred HHcC------------CC--hHHHHHHHHHHHhCCCeEEEEE------------ECCEEEEEEEccCcchhhHHHHHHHH
Confidence 4321 11 1345666778889999999998 46689999999999999999999999
Q ss_pred HhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh
Q 042091 650 RDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK 729 (1023)
Q Consensus 650 ~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 729 (1023)
++.|+++.|+|||+..++.++++++||. .+++++.|++|.++++.+++
T Consensus 663 ~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--------------------------------~~~~~~~p~~K~~~i~~l~~ 710 (834)
T PRK10671 663 HKAGYRLVMLTGDNPTTANAIAKEAGID--------------------------------EVIAGVLPDGKAEAIKRLQS 710 (834)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcCCC--------------------------------EEEeCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999996 36889999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 042091 730 GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAAL 809 (1023)
Q Consensus 730 ~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~nv~~i 809 (1023)
+++.|+|+|||.||+||+++||+||+|| +|++.++++||++++++++..+..++++||+++++|++|+.|++.||++.+
T Consensus 711 ~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 711 QGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred cCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 042091 810 LINV 813 (1023)
Q Consensus 810 ~~~~ 813 (1023)
++++
T Consensus 790 ~~a~ 793 (834)
T PRK10671 790 PIAA 793 (834)
T ss_pred HHHH
Confidence 8765
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-60 Score=516.48 Aligned_cols=499 Identities=27% Similarity=0.405 Sum_probs=391.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCceEEEEEC-CEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEeeccc
Q 042091 184 FLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRG-GKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAIDESSM 262 (1023)
Q Consensus 184 ll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~-g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VDES~L 262 (1023)
++..+-+++.|-|-+.+...|.+.+....++++++ |..+.+++.+|+.||+|.++.||+||+||.+++|.. +||||.+
T Consensus 77 lFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAI 155 (681)
T COG2216 77 LFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAI 155 (681)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhc
Confidence 33345567777777777777776655556777765 899999999999999999999999999999999986 9999999
Q ss_pred cCCCceeccCCC---CCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 042091 263 TGESKIVRKDHK---TPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVGLAVAF 339 (1023)
Q Consensus 263 TGES~pv~K~~~---~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~a~ 339 (1023)
||||.||-|.+| +. +-.||.+++...++++++...+|.+.++..+++.++.++||-+..++ +...++.+.+
T Consensus 156 TGESaPViresGgD~ss-VtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~-----iLL~~LTliF 229 (681)
T COG2216 156 TGESAPVIRESGGDFSS-VTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT-----ILLSGLTLIF 229 (681)
T ss_pred cCCCcceeeccCCCccc-ccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH-----HHHHHHHHHH
Confidence 999999999987 44 89999999999999999999999999999999999999999554443 3333333222
Q ss_pred HHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 042091 340 LVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYSMRKMM 419 (1023)
Q Consensus 340 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~~~~l~ 419 (1023)
++..+.+.. +. ++ ..+. .-+..+.++++|..+|-.+.-.++..=-.+|.|+.
T Consensus 230 L~~~~Tl~p-~a-~y---------~~g~-----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~ 281 (681)
T COG2216 230 LLAVATLYP-FA-IY---------SGGG-----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVT 281 (681)
T ss_pred HHHHHhhhh-HH-HH---------cCCC-----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhh
Confidence 222221111 11 10 0000 00111227889999998887666655567999999
Q ss_pred hCCcccccchhhhhccCceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCC
Q 042091 420 ADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKD 499 (1023)
Q Consensus 420 ~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~ 499 (1023)
+.|++-++..++|..|.+|++..|||||+|.|+-.-.+++..+.. +. .++...+.. + +++
T Consensus 282 ~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv----------~~--~~la~aa~l-s---Sl~---- 341 (681)
T COG2216 282 QFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV----------SE--EELADAAQL-A---SLA---- 341 (681)
T ss_pred hhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCC----------CH--HHHHHHHHH-h---hhc----
Confidence 999999999999999999999999999999998777666653321 11 122222221 1 121
Q ss_pred CCceeecCChHHHHHHHHHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhcccccc
Q 042091 500 GEAVEVSGSPTEKAILSWAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDT 579 (1023)
Q Consensus 500 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 579 (1023)
-..|..+.+++.|++.+...+...... .....||+.+.+.+|+-.. ++ +-.-|||.+.+.+..+. .
T Consensus 342 ------DeTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~---~ 407 (681)
T COG2216 342 ------DETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRE---R 407 (681)
T ss_pred ------cCCCCcccHHHHHHHhccCCCcccccc-cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHh---c
Confidence 135777889999999886554432211 3567899999887777543 33 34569999999987653 1
Q ss_pred CCccccCCchHHHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEE
Q 042091 580 DGQLQSIDGDEDFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMV 659 (1023)
Q Consensus 580 ~~~~~~l~~~~~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~ml 659 (1023)
+|. . + ++++...++-++.|-..++++ .|-.++|++.++|-++||.+|-+.+||+.|||.+|+
T Consensus 408 ~g~-~--p---~~l~~~~~~vs~~GGTPL~V~------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 408 GGH-I--P---EDLDAAVDEVSRLGGTPLVVV------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred CCC-C--C---HHHHHHHHHHHhcCCCceEEE------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 221 1 1 678888899999999999998 778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 042091 660 TGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGD 739 (1023)
Q Consensus 660 TGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGD 739 (1023)
||||+.||.+||++.|++. ..|.++||+|.++++.-|.+|+.|+|+||
T Consensus 470 TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred eCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 9999999999999999984 36899999999999999999999999999
Q ss_pred CccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHH
Q 042091 740 GTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQL 802 (1023)
Q Consensus 740 G~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 802 (1023)
|+||+|||.+||||+||. +||+.|||++.++=+|.|...+.++++.|+...-.=-..-.|++
T Consensus 518 GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSI 579 (681)
T COG2216 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSI 579 (681)
T ss_pred CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeeh
Confidence 999999999999999999 99999999999999999999999999999987654333333443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.1e-33 Score=304.24 Aligned_cols=225 Identities=32% Similarity=0.545 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCCeEEe
Q 042091 179 IAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHSLAID 258 (1023)
Q Consensus 179 i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~l~VD 258 (1023)
+++++++..+++.++++++++..+++++..++..++|+|||++++++++||+|||+|.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 34556666788999999999999999887765459999999999999999999999999999999999999993347999
Q ss_pred eccccCCCceeccCC----CCCeeeccceEeecceeEEEEEEecccHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHH
Q 042091 259 ESSMTGESKIVRKDH----KTPFLMSGCKVADGVGTMMVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGIVG 334 (1023)
Q Consensus 259 ES~LTGES~pv~K~~----~~~~l~aGt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~ 334 (1023)
||.+|||+.|+.|.+ .++++|+||.+.+|.+.++|++||.+|..|++.+...+.+.+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 999999999999992 3457999999999999999999999999999999998888888999999999999998887
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCcccccccccccchHHHHHHHHHHhhcchhhhhhhhhhhccCchhHHHHHHHHHH
Q 042091 335 LAVAFLVLAVLLVRFFTGHTTKEDGSSAFVKGRTSVSDAVDGVIKIVTIATNSRAIQVTIVVVAVPEGLPLAVTLTLAYS 414 (1023)
Q Consensus 335 l~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v~ilv~~iP~~L~lav~~~l~~~ 414 (1023)
++++++++++++ +.... . ++...+..+ +++++++|||+||+++++++.++
T Consensus 162 ~~~~~~~~~~~~---~~~~~------~--------------~~~~~~~~~-------i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 162 LAIAILVFIIWF---FNDSG------I--------------SFFKSFLFA-------ISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHCH---TGSTT------C--------------HCCHHHHHH-------HHHHHHHS-TTHHHHHHHHHHHH
T ss_pred cccchhhhccce---ecccc------c--------------ccccccccc-------cceeeeecccceeehHHHHHHHH
Confidence 777766654332 11000 0 134455666 89999999999999999999999
Q ss_pred HHHHHhCCcccccchhhhh
Q 042091 415 MRKMMADKALVRRLSACET 433 (1023)
Q Consensus 415 ~~~l~~~~ilvr~~~~~E~ 433 (1023)
+++|.++|+++|+++++|+
T Consensus 212 ~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 212 ARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHTTEEESSTTHHHH
T ss_pred HHHHHHCCEEEeCcccccC
Confidence 9999999999999999995
No 35
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.91 E-value=4.2e-22 Score=222.41 Aligned_cols=435 Identities=11% Similarity=0.119 Sum_probs=284.4
Q ss_pred CchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccc--------------------------
Q 042091 564 GAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFIL-------------------------- 616 (1023)
Q Consensus 564 Ga~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~-------------------------- 616 (1023)
|-.+...+.|+.+++.. .+.|++... +++++.+.+....|+ |+++|||+..
T Consensus 698 g~ad~~~eACTdfWdGa-di~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGA-DIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCCc-eeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 66678889999999743 457888776 788888888788885 9999999870
Q ss_pred --------------cc-C---------------CCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHH
Q 042091 617 --------------DK-W---------------TLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT 666 (1023)
Q Consensus 617 --------------~~-~---------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 666 (1023)
+. + +..-.+.+|.|++..+.+.|++....|+.|.++.||.+.+|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 0 01124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC---------------------------------------CCCeeeechh-------hhccC--
Q 042091 667 AKAIALECGILGSDAEA---------------------------------------NDPNIIEGKV-------FRALS-- 698 (1023)
Q Consensus 667 a~~ia~~~gi~~~~~~~---------------------------------------~~~~vi~g~~-------~~~l~-- 698 (1023)
.+-+|.++||...|++. .....++-++ ++.++
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999999988730 0011111111 00000
Q ss_pred -----------------------HHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhCCcc
Q 042091 699 -----------------------DKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTND--APALHEADIG 753 (1023)
Q Consensus 699 -----------------------~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND--~~aL~~Advg 753 (1023)
-++++++..-+..|..++|+.-.++++.+|++|++++++|...|- ...+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 122333333446899999999999999999999999999999884 4456889999
Q ss_pred EEecCC------------CCH------------------HHHhccCccccCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 042091 754 LAMGIQ------------GTE------------------VAKENSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLT 803 (1023)
Q Consensus 754 Iamg~~------------g~~------------------~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 803 (1023)
||+-.- ++. ...-++|+.+.....-++..+|+.+|.....+|+++.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997310 111 11234566666666778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH-hccCCCCccccccCCCCCCCCC--cchHH-----HHHHH
Q 042091 804 VNVAALLINVVAAISSGDVPLNAVQLLWVNLIMDTLGALA-LATEPPTDHLMHRLPVGRKEPL--ITNIM-----WRNLI 875 (1023)
Q Consensus 804 ~nv~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la-l~~e~~~~~~m~~~P~~~~~~~--~~~~~-----~~~~~ 875 (1023)
..+...++.+++.++..+..++..+++|...+-..+..+. |-..+|...+|-+...++...+ .++.. .+.+.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilkFs 1175 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILKFS 1175 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998855444443 3345555555554332221211 11111 11111
Q ss_pred HHHHHHHHHHHHH-HHhhhcccc---------cccccc----------ccccccchhHHHHHHHHHHHHhhcccCCCCcc
Q 042091 876 VQALYQVTVLLVL-NFKGTSILH---------LEGERR----------QHASDVKNTMIFNAFVLSQIFNEFNARKPDEI 935 (1023)
Q Consensus 876 ~~~~~~~~~~~~l-~~~~~~~~~---------~~~~~~----------~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~ 935 (1023)
..+.+..+++.++ +-+.....+ ..++.. .+....++...-..++...+|..+...+..+.
T Consensus 1176 ls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIThih~tkp 1255 (1354)
T KOG4383|consen 1176 LSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQITHIHCTKP 1255 (1354)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEEEEEEecc
Confidence 1222222211111 111111111 111100 01111223333444566667777766666677
Q ss_pred ceeecCcchHHHHHHHHHHHHHHHHH----HHHH-----HHcccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042091 936 NVFTGVTKNYLFMGIIGITCVLQIII----IEFL-----GKFTKTVKLDWKLWLASIGIGLFSWPLAVLGKMIP 1000 (1023)
Q Consensus 936 ~~~~~~~~n~~~~~~~~~~~~~~~~~----v~~~-----~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 1000 (1023)
.+|+...+|.||-..+-..+.-++++ .+.. +.-|+....+..-|++.+++..++.+.+|++|.-.
T Consensus 1256 l~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKihe 1329 (1354)
T KOG4383|consen 1256 LSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHE 1329 (1354)
T ss_pred hhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHHH
Confidence 78887777766543322211112111 2222 23456666677789988888888888899999743
No 36
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.91 E-value=3.5e-24 Score=221.62 Aligned_cols=179 Identities=34% Similarity=0.547 Sum_probs=144.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 042091 821 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRLPVGRKEPLITNIMWRNLIVQALYQVTVLLVLNFKGTSILHLEG 900 (1023)
Q Consensus 821 ~~pl~~~qll~~nli~d~l~~lal~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 900 (1023)
|.|+++.|+||+|+++|.+|+++++.|||++++|+|||++++++++++.+|+.++.+|+++++++++.++.+.+.++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999988888777665444332
Q ss_pred cccccccccchhHHHHHHHHHHHHhhcccCCCCccce-eecCcchHHHHHHHHHHHHHHHHHH--HHHHHcccCCCCCHH
Q 042091 901 ERRQHASDVKNTMIFNAFVLSQIFNEFNARKPDEINV-FTGVTKNYLFMGIIGITCVLQIIII--EFLGKFTKTVKLDWK 977 (1023)
Q Consensus 901 ~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~ 977 (1023)
.........++|++|++++++|+++.+++|+.++..+ |.+.++|++++.++++++++|++++ |+++.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 1111234568999999999999999999999664333 3588899999999999998887774 569999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q 042091 978 LWLASIGIGLFSWPLAVLGKMI 999 (1023)
Q Consensus 978 ~w~~~~~~~~~~~~~~~~~k~~ 999 (1023)
+|+++++++++.++++|++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.90 E-value=8.4e-24 Score=224.55 Aligned_cols=211 Identities=33% Similarity=0.462 Sum_probs=145.7
Q ss_pred ceeeeeCCccccccCceEEEEEEeCCcccCCCCCCCcccHHHHHHHHHHHHccCCCcccccCCCCceeecCChHHHHHHH
Q 042091 437 ATTICSDKTGTLTLNEMTVVEAFIGRKKINPPDDSSQMHSIVIYLLSEGIAQNTTGNVFVPKDGEAVEVSGSPTEKAILS 516 (1023)
Q Consensus 437 v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~g~p~e~All~ 516 (1023)
|++||||||||||+|+|.+ .. + -......++ ... ...+.||+..++..
T Consensus 1 i~~i~fDktGTLt~~~~~v--~~-----~--------~~~~~~~~~-~~~----------------~~~s~~p~~~~~~~ 48 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV--AP-----P--------SNEAALAIA-AAL----------------EQGSEHPIGKAIVE 48 (215)
T ss_dssp ESEEEEECCTTTBESHHEE--ES-----C--------SHHHHHHHH-HHH----------------HCTSTSHHHHHHHH
T ss_pred CeEEEEecCCCcccCeEEE--Ee-----c--------cHHHHHHHH-HHh----------------hhcCCCcchhhhhh
Confidence 6899999999999999999 00 0 011222222 111 12357999999999
Q ss_pred HHHHcCCChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccccccCCccccCCchHHHHHHH
Q 042091 517 WAVKLGMKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKYLDTDGQLQSIDGDEDFFKAA 596 (1023)
Q Consensus 517 ~a~~~g~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~ 596 (1023)
++...... . ...-...++ .+ ++.....+. + +|.++.+...+.... .....
T Consensus 49 ~~~~~~~~-~----~~~~~~~~~-----~~-~~~~~~~~~----~-~g~~~~~~~~~~~~~--------------~~~~~ 98 (215)
T PF00702_consen 49 FAKNHQWS-K----SLESFSEFI-----GR-GISGDVDGI----Y-LGSPEWIHELGIRVI--------------SPDLV 98 (215)
T ss_dssp HHHHHHHH-S----CCEEEEEET-----TT-EEEEEEHCH----E-EHHHHHHHHHHHHHH--------------HHHHH
T ss_pred hhhhccch-h----hhhhheeee-----ec-ccccccccc----c-cccchhhhhcccccc--------------ccchh
Confidence 88752211 0 001111111 11 111111111 1 288887766554310 01111
Q ss_pred HHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCC
Q 042091 597 VDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 597 ~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
......++...+.++ .+..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||
T Consensus 99 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 99 EEIQESQGRTVIVLA------------VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp HHHHHHHHHHCEEEE------------ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred hhHHHhhCCccccee------------ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccc
Confidence 122234454455554 37899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC--CHhhH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 042091 677 LGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS--SPNDK--LLLVQALRKGGDVVAVTGDGTNDAPALHEAD 751 (1023)
Q Consensus 677 ~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~--~P~~K--~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Ad 751 (1023)
.. ..+|+++ +|++| .++++.||.+++.|+|+|||.||++|+++||
T Consensus 167 ~~------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 167 FD------------------------------SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp CS------------------------------EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cc------------------------------ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 53 1489999 99999 9999999977779999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.50 E-value=1.6e-13 Score=125.70 Aligned_cols=126 Identities=23% Similarity=0.321 Sum_probs=108.6
Q ss_pred cEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH
Q 042091 626 LILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV 705 (1023)
Q Consensus 626 l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~ 705 (1023)
....+.++---.+=++++++|++|++. ++|++.|||...+....|+-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 346677777778889999999999999 99999999999999999999998753
Q ss_pred HhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC--CCHHHHhccCccccCCChhHHHHH
Q 042091 706 AQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQ--GTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~--g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
.+|+...|+.|.++++.|++.++.|.|+|||.||.+||++||+||..-.+ ..+-+.++||+++. +...++++
T Consensus 72 ----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 72 ----RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred ----eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 58999999999999999999999999999999999999999999976422 23446689999997 55556555
Q ss_pred H
Q 042091 784 V 784 (1023)
Q Consensus 784 i 784 (1023)
+
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 4
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.50 E-value=5.2e-14 Score=127.18 Aligned_cols=73 Identities=41% Similarity=0.663 Sum_probs=64.3
Q ss_pred eeecCChHHHHHHHHHHHcC--CChhcccccccEEEEecCCCCCceEEEEEeecCCeEEEEEeCchHHHHHhhccc
Q 042091 503 VEVSGSPTEKAILSWAVKLG--MKFDRVRSETTVLHVFPFNSEKKRGGVAVKRINSEVHVHWKGAAEMILASCTKY 576 (1023)
Q Consensus 503 ~~~~g~p~e~All~~a~~~g--~~~~~~~~~~~il~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~ 576 (1023)
.+..|+|+|.||+.++.+.| .+....+..+++++++||+|+||+|+|+++ +++.+.+++|||||.|+++|+++
T Consensus 17 ~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 17 EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 34899999999999999984 567778889999999999999999999998 44467779999999999999863
No 40
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.04 E-value=1.5e-09 Score=119.69 Aligned_cols=67 Identities=25% Similarity=0.320 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|..-++.+.++ | +.|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+|..+++-.++..+++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3677777777654 2 56999999999999999999999999 999999999999999889999998886
No 41
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.04 E-value=1e-09 Score=117.92 Aligned_cols=148 Identities=22% Similarity=0.232 Sum_probs=106.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeec---hhhhc--c--------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEG---KVFRA--L-------------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g---~~~~~--l-------------- 697 (1023)
++.+.+.++|++++++|+++++.||+....+..+++++|+..+....+++.+... +.+.. +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3788999999999999999999999999999999999998754333333333321 11000 0
Q ss_pred -------------------------CHHHHHHHHhhc----eEe-----ccCCH--hhHHHHHHHHHhC----CCEEEEE
Q 042091 698 -------------------------SDKEREKVAQEI----TVM-----GRSSP--NDKLLLVQALRKG----GDVVAVT 737 (1023)
Q Consensus 698 -------------------------~~~~~~~~~~~~----~v~-----ar~~P--~~K~~iV~~lq~~----g~~V~~i 737 (1023)
..++..+.+.+. .+. ....| .+|...++.+.++ ...++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 011122222211 111 12222 2477777777664 3469999
Q ss_pred cCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 738 GDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 738 GDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
||+.||.+|++.|++|+||+ ++.+.+|+.||++..+++-.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999999889999998886
No 42
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.02 E-value=2e-09 Score=118.95 Aligned_cols=157 Identities=15% Similarity=0.156 Sum_probs=107.6
Q ss_pred CcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--chhh--------
Q 042091 625 ELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--GKVF-------- 694 (1023)
Q Consensus 625 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g~~~-------- 694 (1023)
|.|++. -...+.+.++++|++++++|+++++.||++...+..+.+++|+.......+++.+.+ |+.+
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 445553 123588999999999999999999999999999999999999864322111111110 0000
Q ss_pred -------------------------------------------------hcc------------CHHHHHH---HHh---
Q 042091 695 -------------------------------------------------RAL------------SDKEREK---VAQ--- 707 (1023)
Q Consensus 695 -------------------------------------------------~~l------------~~~~~~~---~~~--- 707 (1023)
..+ .++++++ .+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 000 0111111 111
Q ss_pred --hceEe------ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc--c
Q 042091 708 --EITVM------GRSSP--NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI--I 771 (1023)
Q Consensus 708 --~~~v~------ar~~P--~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi--i 771 (1023)
.+.+. ...+| ..|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||+ +
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v 245 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPV 245 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCee
Confidence 01111 11222 2688888888765 3 56999999999999999999999999 999999999996 6
Q ss_pred ccCCChhHHHHHHH
Q 042091 772 ILDDNFASVVKVVR 785 (1023)
Q Consensus 772 l~~~~~~~i~~~i~ 785 (1023)
+.+++-+++..+|+
T Consensus 246 ~~~n~edGva~~l~ 259 (272)
T PRK15126 246 IGHCRNQAVSHYLT 259 (272)
T ss_pred cCCCcchHHHHHHH
Confidence 77888889988885
No 43
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.02 E-value=4.5e-10 Score=96.14 Aligned_cols=68 Identities=26% Similarity=0.526 Sum_probs=63.0
Q ss_pred hcCCHHHHHHHhCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 042091 90 QVIRVKGLSELLKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIAS 159 (1023)
Q Consensus 90 ~~~~v~~l~~~l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails 159 (1023)
|...++++++.|+++..+||+++ |+.+|+++||+|.++.++.+++|+.++++|.++++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~--ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSE--EVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHH--HHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHH--HHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 34458999999999999999987 999999999999999889999999999999999999999999886
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.01 E-value=1.2e-09 Score=116.12 Aligned_cols=146 Identities=23% Similarity=0.244 Sum_probs=105.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc--------c-----------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA--------L----------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~--------l----------- 697 (1023)
++.+.+.++|++|+++|+++++.||++...+..+++++++..+....+++.+...+.-.. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999875443333333333111000 0
Q ss_pred -------------------CHHHHHHHHhhc--eEe-----cc--CCHhhHHHHHHHHHhC----CCEEEEEcCCccCHH
Q 042091 698 -------------------SDKEREKVAQEI--TVM-----GR--SSPNDKLLLVQALRKG----GDVVAVTGDGTNDAP 745 (1023)
Q Consensus 698 -------------------~~~~~~~~~~~~--~v~-----ar--~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~ 745 (1023)
..+++.+.+.+. .+. .. ....+|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 001111111111 111 01 2245888888888764 235899999999999
Q ss_pred HhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHH
Q 042091 746 ALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 746 aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777777654
No 45
>PRK10976 putative hydrolase; Provisional
Probab=99.00 E-value=3.1e-09 Score=116.94 Aligned_cols=148 Identities=22% Similarity=0.221 Sum_probs=102.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--chhhh--ccC--------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--GKVFR--ALS-------------- 698 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g~~~~--~l~-------------- 698 (1023)
.+.+.+.++|++++++|+++++.||+....+..+.+++|+.......+++.+.+ |+.+. .++
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 588899999999999999999999999999999999999864322212222211 11000 000
Q ss_pred -------------------------------------------------------HHHHHH---HHh-----hceEe---
Q 042091 699 -------------------------------------------------------DKEREK---VAQ-----EITVM--- 712 (1023)
Q Consensus 699 -------------------------------------------------------~~~~~~---~~~-----~~~v~--- 712 (1023)
.++..+ .+. .+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 011110 000 01110
Q ss_pred ---ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC--ccccCCChhHHH
Q 042091 713 ---GRSSP--NDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD--IIILDDNFASVV 781 (1023)
Q Consensus 713 ---ar~~P--~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad--iil~~~~~~~i~ 781 (1023)
....| .+|..-++.+.++ | +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.|| .++.+++-+++.
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHH
Confidence 01112 2577777777654 2 56999999999999999999999999 99999999988 677788888998
Q ss_pred HHHH
Q 042091 782 KVVR 785 (1023)
Q Consensus 782 ~~i~ 785 (1023)
.+++
T Consensus 258 ~~l~ 261 (266)
T PRK10976 258 HYLR 261 (266)
T ss_pred HHHH
Confidence 8885
No 46
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.99 E-value=4.6e-09 Score=115.43 Aligned_cols=148 Identities=30% Similarity=0.320 Sum_probs=107.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhh-----------------------
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVF----------------------- 694 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~----------------------- 694 (1023)
+.+.++++|+++++.|+++.+.||+....+..+.+++|+.......+++.+....+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999863322111111111000
Q ss_pred -------------------------------------h--------c--cCHH---HHHHHHh-----hceEeccCCH--
Q 042091 695 -------------------------------------R--------A--LSDK---EREKVAQ-----EITVMGRSSP-- 717 (1023)
Q Consensus 695 -------------------------------------~--------~--l~~~---~~~~~~~-----~~~v~ar~~P-- 717 (1023)
. . ...+ +..+.+. ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0 0011 1111111 1122222222
Q ss_pred -------hhHHHHHHHHHhC-CC---EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHH
Q 042091 718 -------NDKLLLVQALRKG-GD---VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 718 -------~~K~~iV~~lq~~-g~---~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.+|...++.+.++ |- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.++..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 4898888888774 43 4999999999999999999999999 9999999999999899999999999874
No 47
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.97 E-value=4e-09 Score=110.49 Aligned_cols=125 Identities=15% Similarity=0.084 Sum_probs=99.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee------eechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI------IEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v------i~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..... ..+. ++|..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~tG~~----------------- 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRVVGYQ----------------- 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCeeECee-----------------
Confidence 68999999999999986 999999999999999999999974211 0111 12221
Q ss_pred EeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWG 787 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~g 787 (1023)
...+++|...++.+++.|..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 127 ---~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 127 ---LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred ---ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 13578999999999888888999999999999999999999995 6777666665544445788888887664
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.91 E-value=7.2e-09 Score=110.98 Aligned_cols=148 Identities=20% Similarity=0.255 Sum_probs=104.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh----h-hcc--------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV----F-RAL-------------- 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~----~-~~l-------------- 697 (1023)
.+.+.+.++|++++++|+++++.||++...+..+++++|+.......+++.+..... + ..+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999754433222332222110 0 000
Q ss_pred ----------------------CHHHHHHHHhhc----eEe-----ccCCH--hhHHHHHHHHHhC----CCEEEEEcCC
Q 042091 698 ----------------------SDKEREKVAQEI----TVM-----GRSSP--NDKLLLVQALRKG----GDVVAVTGDG 740 (1023)
Q Consensus 698 ----------------------~~~~~~~~~~~~----~v~-----ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG 740 (1023)
..+....+..+. .++ ....| .+|...++.+.++ .+.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 111112222211 111 11122 4788888888664 3569999999
Q ss_pred ccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH----HHHHHH
Q 042091 741 TNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS----VVKVVR 785 (1023)
Q Consensus 741 ~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~----i~~~i~ 785 (1023)
.||.+|++.|++|+||+ ++.+.+|+.||++..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999998888888 666654
No 49
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.90 E-value=9.3e-09 Score=113.50 Aligned_cols=66 Identities=27% Similarity=0.418 Sum_probs=57.1
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 566666666543 3 46999999999999999999999999 899999999999999989999999886
No 50
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.89 E-value=6.4e-09 Score=116.28 Aligned_cols=131 Identities=23% Similarity=0.345 Sum_probs=101.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec-cC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG-RS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a-r~ 715 (1023)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..... +...+.+|.... .+.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~ltg--------------~v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKLTG--------------NVLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEEEe--------------EecCccC
Confidence 689999999999999999999999999888999999999963110 000111111000 0001 12
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
..+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++.+++.++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 346788888888764 3 6799999999999999999999999 788999999999999889999888764
No 51
>PLN02887 hydrolase family protein
Probab=98.86 E-value=1.4e-08 Score=121.21 Aligned_cols=66 Identities=30% Similarity=0.421 Sum_probs=56.6
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 719 DKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+|..-++.|.+. | +.|+++|||.||.+||+.|++||||| |+.+.+|+.||+|..+++-+++..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 455555555543 2 46999999999999999999999999 999999999999999999999999886
No 52
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.84 E-value=6.2e-09 Score=87.74 Aligned_cols=61 Identities=34% Similarity=0.525 Sum_probs=56.2
Q ss_pred hCCCcCCCCCCCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 042091 101 LKTNLEKGISGDDTDLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALG 163 (1023)
Q Consensus 101 l~~~~~~GLs~~~~~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~ 163 (1023)
++++...||+++ |+.+|+++||.|+++.++.+++|+.++++|.++++++|+++++++++.+
T Consensus 3 l~~~~~~GLs~~--~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 3 LQTSLESGLSSE--EAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 678887899988 8999999999999998888999999999999999999999999998764
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.83 E-value=1.2e-08 Score=110.76 Aligned_cols=148 Identities=24% Similarity=0.264 Sum_probs=104.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee-e-echhhh--cc--------------
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI-I-EGKVFR--AL-------------- 697 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v-i-~g~~~~--~l-------------- 697 (1023)
..+.+.+.+++++++++|+++++.||+....+..+..++++..+....+++.+ . +|+.+. .+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45779999999999999999999999999999999999998743221111111 0 000000 00
Q ss_pred -------------------------------------------------------CHHHHHH-------HHhhceEecc-
Q 042091 698 -------------------------------------------------------SDKEREK-------VAQEITVMGR- 714 (1023)
Q Consensus 698 -------------------------------------------------------~~~~~~~-------~~~~~~v~ar- 714 (1023)
..++++. .......+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 1111111 1111111111
Q ss_pred --------CCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHH
Q 042091 715 --------SSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 715 --------~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
....+|...++.+.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|+.||+++...+-.++.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 2235898888888764 357999999999999999999999999 999999999999998877788877
Q ss_pred HH
Q 042091 783 VV 784 (1023)
Q Consensus 783 ~i 784 (1023)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 54
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.78 E-value=6.4e-08 Score=105.84 Aligned_cols=147 Identities=16% Similarity=0.103 Sum_probs=100.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh--------h--hccCHHHHHHHH-
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV--------F--RALSDKEREKVA- 706 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~--------~--~~l~~~~~~~~~- 706 (1023)
..+.+.++|++|+++|++++++||+....+..+.+++|+.......+++.+..... + ..++.+...+++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999875444444544443211 0 001111111100
Q ss_pred ----------------------------------------------------------hh--ceEec-----cC--CHhh
Q 042091 707 ----------------------------------------------------------QE--ITVMG-----RS--SPND 719 (1023)
Q Consensus 707 ----------------------------------------------------------~~--~~v~a-----r~--~P~~ 719 (1023)
.+ +.+.. .. .-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 00000 00 1236
Q ss_pred HHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEEecCCCC---HHHHhc--c-CccccCCChhHHHHHHH
Q 042091 720 KLLLVQALRKG------GDVVAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKEN--S-DIIILDDNFASVVKVVR 785 (1023)
Q Consensus 720 K~~iV~~lq~~------g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~---~~ak~~--a-diil~~~~~~~i~~~i~ 785 (1023)
|...++.+.+. .+.|+++||+.||.+||+.|++|+||+ ++. +..|+. | +++..+++-+++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666666543 456999999999999999999999999 887 467776 4 58888889999998886
No 55
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.75 E-value=3.9e-08 Score=104.89 Aligned_cols=129 Identities=22% Similarity=0.326 Sum_probs=95.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc-C
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR-S 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar-~ 715 (1023)
+++|++.+.++.|+++|+++.++||.....+..+.+.+|+..... .....++..+.. .+.++ .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~~-------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLTG-------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEEE-------------EecCccc
Confidence 689999999999999999999999999999999999999974211 000000000000 00111 1
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHH
Q 042091 716 SPNDKLLLVQALRKG-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g---~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
.+..|..+++.+.++ + +.+.++||+.||.+|++.|+++++++ +.+..++.||+++.++++..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 233466777665544 2 35889999999999999999999985 678889999999999999887754
No 56
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.72 E-value=1.5e-07 Score=103.84 Aligned_cols=148 Identities=16% Similarity=0.053 Sum_probs=98.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC-CCCCCCCCeeeechh--------h--hccCHHHHHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG-SDAEANDPNIIEGKV--------F--RALSDKEREKV 705 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~-~~~~~~~~~vi~g~~--------~--~~l~~~~~~~~ 705 (1023)
.+-+.++++|++|+++|+++++.||+....+..+++++|+.. +....+++.+..... + ..++.+...++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 355678999999999999999999999999999999999852 333344444443210 0 00111111110
Q ss_pred H-------------------------------------------------------------h--hceEe-----ccCCH
Q 042091 706 A-------------------------------------------------------------Q--EITVM-----GRSSP 717 (1023)
Q Consensus 706 ~-------------------------------------------------------------~--~~~v~-----ar~~P 717 (1023)
+ . .+.+. -...|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 0 0 00010 01112
Q ss_pred --hhHHHHHHHHHh-------CCCEEEEEcCCccCHHHhhhCCccEEecCCCC-HH-----HHhccCccccCCChhHHHH
Q 042091 718 --NDKLLLVQALRK-------GGDVVAVTGDGTNDAPALHEADIGLAMGIQGT-EV-----AKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 718 --~~K~~iV~~lq~-------~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~-~~-----ak~~adiil~~~~~~~i~~ 782 (1023)
.+|..-++.+.+ ....|+++|||.||.+||+.|++|+||| ++. +. .+..+|++....+-+++.+
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~ 262 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWRE 262 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHH
Confidence 366666666654 2357999999999999999999999999 444 32 3457899999888889888
Q ss_pred HHH
Q 042091 783 VVR 785 (1023)
Q Consensus 783 ~i~ 785 (1023)
+++
T Consensus 263 ~l~ 265 (271)
T PRK03669 263 GLD 265 (271)
T ss_pred HHH
Confidence 886
No 57
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.71 E-value=6.8e-08 Score=101.75 Aligned_cols=118 Identities=25% Similarity=0.280 Sum_probs=91.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...... ..+. +++|... -
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~v~-----------------g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGRVV-----------------G 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEeceee-----------------e
Confidence 58999999999999999999999999999999999999999854321 0111 3444432 1
Q ss_pred ccCCHhhHHHHHHHHHhC-CC---EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCcccc
Q 042091 713 GRSSPNDKLLLVQALRKG-GD---VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIIL 773 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~-g~---~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~ 773 (1023)
-.+..+.|.+.++.+.+. |. .+.++|||.||.|||+.|+.+++++ +....+..|+....
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 234557898888666653 44 5899999999999999999999995 66666666666554
No 58
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=98.70 E-value=8.2e-09 Score=77.78 Aligned_cols=45 Identities=62% Similarity=0.897 Sum_probs=40.7
Q ss_pred CCCCCcccccCCCCChhhhhhHHHhh-hhhhccccccccccchhhHH
Q 042091 32 VSSDPFDIAQAKHVPVASLKRWRQAS-LVLNASRRFRYTLDLKKEEE 77 (1023)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~w~~~~-~~l~~~~~~~y~~~~~~~~~ 77 (1023)
|++++||++ +||++.++++|||++. .++|+.|||+|++|+++.++
T Consensus 1 yl~~~Fdi~-~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFDIP-AKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccCCC-CCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 467899999 6999999999999997 99999999999999987643
No 59
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.70 E-value=5.8e-08 Score=98.26 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=83.3
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
.+|+.|+++|+++.++|+.+...+..+.+.+|+..... ...-.|+.-..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~------------------------------~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE------------------------------GIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe------------------------------cCCCCHHHHHHH
Confidence 57899999999999999999999999999999973110 012234555555
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChh
Q 042091 724 VQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFA 778 (1023)
Q Consensus 724 V~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~ 778 (1023)
++.++-..+.++++||+.||.+|++.|++++||+ ++.+..++.|+++..+++-.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCC
Confidence 5555444467999999999999999999999999 99999999999998755443
No 60
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.66 E-value=1.5e-07 Score=102.96 Aligned_cols=146 Identities=26% Similarity=0.326 Sum_probs=101.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeec--hh---------------------
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEG--KV--------------------- 693 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g--~~--------------------- 693 (1023)
++.+++.++|++++++|+++.+.||++...+..+.+++|+.......+++.+... +.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999998643221111111100 00
Q ss_pred ----------------------------------------------hhc----cCHH---HHHHHHh------hceEe--
Q 042091 694 ----------------------------------------------FRA----LSDK---EREKVAQ------EITVM-- 712 (1023)
Q Consensus 694 ----------------------------------------------~~~----l~~~---~~~~~~~------~~~v~-- 712 (1023)
... .+++ ++.+.+. .+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 000 0011 1111111 11111
Q ss_pred ----ccCCH--hhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHH
Q 042091 713 ----GRSSP--NDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 713 ----ar~~P--~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
-...| .+|..-++.+.+. .+.++++||+.||.+|++.|+.|+||+ ++.+.+|+.||+++.+++-.++..
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 11222 3688888888765 256999999999999999999999999 899999999999998888777765
Q ss_pred H
Q 042091 783 V 783 (1023)
Q Consensus 783 ~ 783 (1023)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
No 61
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.63 E-value=1e-07 Score=95.65 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=82.1
Q ss_pred HHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHH
Q 042091 645 AVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLV 724 (1023)
Q Consensus 645 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV 724 (1023)
+|+.|+++|+++.++||+....+..+.+++|+... ++ .. ..|.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------~~-----------------------~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------YQ-----------------------GQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------Ee-----------------------cc--cchHHHH
Confidence 89999999999999999999999999999998731 11 11 2344444
Q ss_pred HHHHh----CCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhH-HHHHH
Q 042091 725 QALRK----GGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFAS-VVKVV 784 (1023)
Q Consensus 725 ~~lq~----~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~-i~~~i 784 (1023)
+.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.-.+ +.+++
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 44432 3467999999999999999999999999 888899999999998664333 44443
No 62
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.54 E-value=8.7e-07 Score=97.91 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=101.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh----------------hh--cc
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV----------------FR--AL 697 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~----------------~~--~l 697 (1023)
+.+.+++.++|+.|+++|++++++||+....+..+.+++|+..+....+++.+...+. +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 4567889999999999999999999999999999999999875444444444432110 00 01
Q ss_pred CHHHHHHHH------------------------------------hh--c--eEe-c-----------------------
Q 042091 698 SDKEREKVA------------------------------------QE--I--TVM-G----------------------- 713 (1023)
Q Consensus 698 ~~~~~~~~~------------------------------------~~--~--~v~-a----------------------- 713 (1023)
+.+...+++ .. + .++ .
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 111000000 00 0 000 0
Q ss_pred ----cC-CHhhHHHHHHHHHhC----C-CEEEEEcCCccCHHHhhhCCccEEecCCCCHHHH----hcc-Cccc--cCCC
Q 042091 714 ----RS-SPNDKLLLVQALRKG----G-DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAK----ENS-DIII--LDDN 776 (1023)
Q Consensus 714 ----r~-~P~~K~~iV~~lq~~----g-~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak----~~a-diil--~~~~ 776 (1023)
.. .+.+|...++.+.+. . +.|+++||+.||.+|++.|++|+||+ |+.+..| ..| +.+. ..++
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 00 011566666666543 4 88999999999999999999999999 9999988 666 6777 4556
Q ss_pred hhHHHHHHH
Q 042091 777 FASVVKVVR 785 (1023)
Q Consensus 777 ~~~i~~~i~ 785 (1023)
-.++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 778888875
No 63
>PRK08238 hypothetical protein; Validated
Probab=98.49 E-value=2.8e-05 Score=91.75 Aligned_cols=99 Identities=19% Similarity=0.235 Sum_probs=76.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.++.. .++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~~------------------~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDGT------------------TNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCCc------------------cccC
Confidence 588999999999999999999999999999999999999832 23333221 2456
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 763 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ 763 (1023)
|+.|.+.++..... +.+.++||+.||.|+++.|+-.++++ .+...
T Consensus 126 g~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 126 GAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred CchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 77776655432222 22578899999999999999999997 44443
No 64
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.43 E-value=1.4e-06 Score=91.86 Aligned_cols=126 Identities=20% Similarity=0.269 Sum_probs=92.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec--c
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG--R 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a--r 714 (1023)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+..... .....+++.. +.. -
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~~----------------i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDGM----------------ITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCCe----------------EECccc
Confidence 5789999999999999 9999999999999999999999863111 0011111100 001 1
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCc-cccCCChhHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDI-IILDDNFASVVKVVR 785 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adi-il~~~~~~~i~~~i~ 785 (1023)
..|..|...++.++..+..++|+|||.||.+|.+.|++|+..+ ...+.....++. ++. ++..+...+.
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~ 196 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAID 196 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHH
Confidence 2477898999999888889999999999999999999999887 443444455665 443 5666665553
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.42 E-value=3.6e-07 Score=90.37 Aligned_cols=110 Identities=24% Similarity=0.339 Sum_probs=80.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+-||+++.++.|++.|.+|.++||--..-+..+|.++||+..+...+....-..-++...... -.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~-----------~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTN-----------EPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccC-----------Ccccc
Confidence 5789999999999999999999999999999999999999875443222111110001000000 01133
Q ss_pred HhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 717 PNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 717 P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
...|.++++.++++ -+.++|+|||.||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 45899999999885 457899999999999999988877765
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.42 E-value=7.2e-07 Score=92.18 Aligned_cols=96 Identities=18% Similarity=0.249 Sum_probs=77.8
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
.+++.|+++|+++.++||.....+..+++++|+... |. ..++|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------------------------------f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------------------------------YQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------ec--CCCcHHHH
Confidence 689999999999999999999999999999998631 11 12335455
Q ss_pred HHHHHh-C---CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccC
Q 042091 724 VQALRK-G---GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILD 774 (1023)
Q Consensus 724 V~~lq~-~---g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~ 774 (1023)
++.+.+ . ...|+|+||+.||.+|++.|+++++++ ++.+..+..||+++..
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRI 154 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecC
Confidence 444433 2 357999999999999999999999998 7888889999999964
No 67
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.39 E-value=1.3e-06 Score=94.26 Aligned_cols=144 Identities=14% Similarity=0.209 Sum_probs=96.3
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC--CCCCCCCeeeech------h----h-------------
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS--DAEANDPNIIEGK------V----F------------- 694 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~vi~g~------~----~------------- 694 (1023)
++..++++ ++++|++++++||+....+..+.+++++..+ ....+++.+.... . +
T Consensus 18 ~~~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (236)
T TIGR02471 18 ASFVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEAL 96 (236)
T ss_pred HHHHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHH
Confidence 33446666 6999999999999999999999999998533 1122222221110 0 0
Q ss_pred hcc--------------------CH------HHHHHHHhh----ce-Eec-----cCCH--hhHHHHHHHHHhC-C---C
Q 042091 695 RAL--------------------SD------KEREKVAQE----IT-VMG-----RSSP--NDKLLLVQALRKG-G---D 732 (1023)
Q Consensus 695 ~~l--------------------~~------~~~~~~~~~----~~-v~a-----r~~P--~~K~~iV~~lq~~-g---~ 732 (1023)
..+ .+ +++.+.+.. .. +++ ...| ..|...++.+.++ | .
T Consensus 97 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~ 176 (236)
T TIGR02471 97 ADIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLE 176 (236)
T ss_pred hcCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHH
Confidence 000 00 011111111 11 111 1233 3788888888664 3 3
Q ss_pred EEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC----ccccCCChhHHHHHHH
Q 042091 733 VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD----IIILDDNFASVVKVVR 785 (1023)
Q Consensus 733 ~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad----iil~~~~~~~i~~~i~ 785 (1023)
.|+++||+.||.+|++.+++|++|+ ++.+..|+.|| ++...++-.++.++|+
T Consensus 177 ~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 177 QILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred HEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 5899999999999999999999999 99999999999 7777777788888885
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.32 E-value=2e-06 Score=90.25 Aligned_cols=117 Identities=20% Similarity=0.228 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+++|++.+.++.|+++|+++.++|+-....+..+++.+|+..... ..+...+ -..... ..+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~----~~~~~~~-~g~~~p----------~~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS----NELVFDE-KGFIQP----------DGIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE----EEEEEcC-CCeEec----------ceeeEEc
Confidence 689999999999999999999999999999999999999753110 0111100 000000 0011234
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccC
Q 042091 717 PNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSD 769 (1023)
Q Consensus 717 P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~ad 769 (1023)
|..|.++++.+.++ .+.++++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 56677777766543 346999999999999999999999997 55555555555
No 69
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.22 E-value=8.4e-06 Score=87.14 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=45.0
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE 690 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~ 690 (1023)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+..+....+++.+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 34556679999999999999999999999999999999999865444444444443
No 70
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.20 E-value=4.4e-06 Score=80.33 Aligned_cols=115 Identities=22% Similarity=0.348 Sum_probs=91.1
Q ss_pred HHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHH
Q 042091 644 DAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLL 723 (1023)
Q Consensus 644 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~i 723 (1023)
..|+.+.+.|+++-++||++...+..=|+++||.. + | .--.+|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------~-----------------------~--qG~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------L-----------------------Y--QGISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------e-----------------------e--echHhHHHH
Confidence 46889999999999999999999999999999973 1 1 223577777
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCC----hhHHHHHHHHHHHHHHh
Q 042091 724 VQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDN----FASVVKVVRWGRSVFAN 793 (1023)
Q Consensus 724 V~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~----~~~i~~~i~~gR~~~~~ 793 (1023)
.+.|.++ -+.|+++||-.||.|+|+..++++|.. ++-+..++.||+|+.... +..+.++|..++..+.-
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 7666654 457999999999999999999999998 888889999999997553 44455555555544443
No 71
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.14 E-value=1.5e-05 Score=84.76 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=88.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe--c
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM--G 713 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~--a 713 (1023)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.... ... ....++|..+....+ .-..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~-n~~~~~~~~~~~~~p--------~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYC-NEADFSNEYIHIDWP--------HPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEe-ceeEeeCCeeEEeCC--------CCCccccc
Confidence 37999999999999999999999999999999999988754321 100 112233332211000 00000 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHh--ccCccccCCChhHHHHHHH
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--NSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~--~adiil~~~~~~~i~~~i~ 785 (1023)
......|..+++.++...+.+.|+|||.||.+|++.||+.+|-+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 139 ~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11135799999999887788999999999999999999988644 21121121 122222 36777776664
No 72
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.09 E-value=2.9e-05 Score=82.88 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=41.6
Q ss_pred cccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCC-CCCCCCCCCeeee
Q 042091 639 RPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGIL-GSDAEANDPNIIE 690 (1023)
Q Consensus 639 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~-~~~~~~~~~~vi~ 690 (1023)
-+.++++|+.|+++|++++++||+....+..+.+++|+. .+....+++.+.+
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~ 70 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHL 70 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEc
Confidence 344899999999999999999999999999999999986 3333344444443
No 73
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.05 E-value=3.6e-06 Score=87.50 Aligned_cols=92 Identities=27% Similarity=0.385 Sum_probs=69.0
Q ss_pred ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHh-
Q 042091 640 PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPN- 718 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~- 718 (1023)
+++.+.|+.++++|++++++||+....+.++++.+|+.... ++..+....- +.....+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~~~~~~~~~----------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VIGNELFDNG----------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EEEEEEECTT----------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EEEEeeeecc----------cceeeeeECCCC
Confidence 78889999999999999999999999999999999998521 1111100000 11223444444
Q ss_pred --hHHHHHHHH------HhCCCEEEEEcCCccCHHHhh
Q 042091 719 --DKLLLVQAL------RKGGDVVAVTGDGTNDAPALH 748 (1023)
Q Consensus 719 --~K~~iV~~l------q~~g~~V~~iGDG~ND~~aL~ 748 (1023)
.|...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999986
No 74
>PLN02954 phosphoserine phosphatase
Probab=98.04 E-value=2.8e-05 Score=83.12 Aligned_cols=128 Identities=25% Similarity=0.306 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee------eechhhhccCHHHHHHHHhhce
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI------IEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v------i~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+++|++.+.++.|+++|+++.++||.....+..+.+.+|+.....-. .... +.|.... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~-~~~~~~~~g~~~g~~~~--------------~ 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA-NQILFGDSGEYAGFDEN--------------E 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE-eEEEEcCCCcEECccCC--------------C
Confidence 47899999999999999999999999999999999999996311000 0001 1111000 0
Q ss_pred EeccCCHhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhh--CCccEEecCCC-CHHHHhccCccccCCChhHHHHH
Q 042091 711 VMGRSSPNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHE--ADIGLAMGIQG-TEVAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~--AdvgIamg~~g-~~~ak~~adiil~~~~~~~i~~~ 783 (1023)
..+....|.+.++.+.++ .+.++|+||+.||..|.+. ++++++.|... .+.....+|+++. ++..+..+
T Consensus 149 --~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 --PTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred --cccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 001123477777776654 3568999999999999777 46666655221 2334556899886 56665543
No 75
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.03 E-value=2.7e-05 Score=84.79 Aligned_cols=150 Identities=14% Similarity=0.121 Sum_probs=100.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCC--CCCCCCCeeeechhh------------------
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGS--DAEANDPNIIEGKVF------------------ 694 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~vi~g~~~------------------ 694 (1023)
..+..|...+++++++++|+.+++.||+....++.+.+++++..+ ....+++.+..+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 346779999999999999999999999999999999999998765 222333333322100
Q ss_pred --------hc-----------------cCHHH----H---HHHHhh----ceE-ec-----cCCH--hhHHHHHHHHHhC
Q 042091 695 --------RA-----------------LSDKE----R---EKVAQE----ITV-MG-----RSSP--NDKLLLVQALRKG 730 (1023)
Q Consensus 695 --------~~-----------------l~~~~----~---~~~~~~----~~v-~a-----r~~P--~~K~~iV~~lq~~ 730 (1023)
.. ...+. + .+.+.+ +.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 00111 1 111111 111 11 1233 4888888888764
Q ss_pred ----CCEEEEEcCCccCHHHhhh-CCccEEecCCCCHHHHhccC-------ccccCCChhHHHHHHH
Q 042091 731 ----GDVVAVTGDGTNDAPALHE-ADIGLAMGIQGTEVAKENSD-------IIILDDNFASVVKVVR 785 (1023)
Q Consensus 731 ----g~~V~~iGDG~ND~~aL~~-AdvgIamg~~g~~~ak~~ad-------iil~~~~~~~i~~~i~ 785 (1023)
...|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3679999999999999998 67999999 89888886543 5444445677777764
No 76
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.94 E-value=1.8e-05 Score=81.17 Aligned_cols=98 Identities=21% Similarity=0.288 Sum_probs=71.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..-... ......++|+... -.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QV 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------cc
Confidence 4789999999999999999999999999999999999998632110 0000022222110 01
Q ss_pred cCCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC
Q 042091 714 RSSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEA 750 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~A 750 (1023)
.+.+..|...++.++++ ...+.++|||.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24568899999887654 34689999999999999875
No 77
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.92 E-value=7.1e-05 Score=80.04 Aligned_cols=128 Identities=22% Similarity=0.320 Sum_probs=90.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.||+.+.++.|++.|+++.++||........+.+.+|+.... ..++.++... ....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-----SVVIGGDSLP----------------NKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----cEEEcCCCCC----------------CCCc
Confidence 368999999999999999999999999999999999999986421 1233322211 0112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEec--CC-CCHHHHhccCccccCCChhHHHHHHHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI-GLAMG--IQ-GTEVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv-gIamg--~~-g~~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
.|+--..+++.++...+.++++||+.||..+.+.|++ +|.+. .. ..+.....+|+++. ++..+..++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 2333344445555455679999999999999999998 45443 11 23444567888874 78888887754
No 78
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.92 E-value=3.5e-05 Score=79.74 Aligned_cols=113 Identities=15% Similarity=0.141 Sum_probs=77.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc-C
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR-S 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar-~ 715 (1023)
++++++.+.++.|++.|+++.++|+.+......+.+..|+..... .+++++.... .+..+.-...++.++.. .
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI-----EIYSNPASFD-NDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee-----EEeccCceEC-CCCcEEEecCCCCccCcCC
Confidence 789999999999999999999999999999999999999864211 1222111000 00000000000111111 1
Q ss_pred CHhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
....|.++++.++++ .+.+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 223699999999887 8889999999999999999987664
No 79
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.89 E-value=3.9e-05 Score=80.57 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=78.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC---CCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE---ANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
..+++|++.+.++.++++|+++.++||.....+..+++.+|+..-... .......+|+...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~---------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG---------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence 346899999999999999999999999999999999999999642110 0001112222110
Q ss_pred eccCCHhhHHHHHHHHHh-CC---CEEEEEcCCccCHHHhhhCCccEEec
Q 042091 712 MGRSSPNDKLLLVQALRK-GG---DVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~-~g---~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
-.+.++.|...++.+.+ .+ +.+.++||+.+|.||++.|+.++++.
T Consensus 149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 12456788887776654 33 36899999999999999999999886
No 80
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.89 E-value=4.7e-05 Score=81.21 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=85.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceE--e-c
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITV--M-G 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v--~-a 713 (1023)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +....... ....++|+.+..-.+ .-.. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~-n~~~~~~~~~~~~kp--------~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYC-NGSDFSGEYITITWP--------HPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEE-eEEEecCCeeEEecc--------CCccccccc
Confidence 68999999999999999999999999999999999988 64311000 011223332210000 0000 0 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHh--ccCccccCCChhHHHHHHH
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--NSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~--~adiil~~~~~~~i~~~i~ 785 (1023)
++ ...|..+++.++.....+.|+|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 01 13488888888877778999999999999999999977632 11122222 233333 36777666653
No 81
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.86 E-value=9.5e-05 Score=78.91 Aligned_cols=128 Identities=23% Similarity=0.356 Sum_probs=96.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
...+-|+++++++.|+++|++..++|++....+..+.+..|+..... .++.+.... ...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----VIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----eEEcCCCCC----------------CCC
Confidence 45788999999999999999999999999999999999999986432 222222211 122
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEEecCC-CCHHHHhccCccccCCChhHHHHHHH
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEAD---IGLAMGIQ-GTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Ad---vgIamg~~-g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
-.|.....+++.+....+.++||||..+|..|=+.|+ ||+..|.+ +.......+|+++. ++..+...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 3566666666666655447999999999999999998 77888742 45567777999987 6777666553
No 82
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.78 E-value=0.00019 Score=77.80 Aligned_cols=53 Identities=4% Similarity=-0.048 Sum_probs=43.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCee
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNI 688 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~v 688 (1023)
+..-+.+.++|++|+++||.|++.||........+.+++|+..+....+++.+
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I 69 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAI 69 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEE
Confidence 34566799999999999999999999999999999999999754433333333
No 83
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.78 E-value=0.00017 Score=86.41 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=37.0
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
.-+.+.++|+.|+++|+.+++.||+....+..+++++|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 33567999999999999999999999999999999999853
No 84
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.76 E-value=0.00014 Score=76.54 Aligned_cols=126 Identities=18% Similarity=0.243 Sum_probs=87.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+.... ..++..++.. ..+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-----DHVIGSDEVP----------------RPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-----eeEEecCcCC----------------CCCCC
Confidence 78899999999999999999999999999999999999986421 1222222110 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecC-CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA---MGI-QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa---mg~-~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=..+++.++-..+.++|+||+.+|..+-++|++... -|. +..+..++.+|+++. ++..+..+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~~ 204 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALCR 204 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHhh
Confidence 333344444454445679999999999999999998643 231 223346678999875 5666665543
No 85
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.75 E-value=7.4e-05 Score=72.22 Aligned_cols=117 Identities=21% Similarity=0.246 Sum_probs=77.9
Q ss_pred eccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 633 GIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 633 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.-..++++++.+.++.|++.|++++++||.....+....+++|+..... .++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD-----PVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh-----heeccchhhhhccccccccccccccc
Confidence 3456899999999999999999999999999999999999999842211 11111100000000000001111234
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC-CccE
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA-DIGL 754 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~A-dvgI 754 (1023)
.+-.|+.+..+.+.+....+.++++||+.||..|.+.+ .-+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 46667777777777766667899999999999999984 4443
No 86
>PLN02382 probable sucrose-phosphatase
Probab=97.74 E-value=0.00022 Score=83.03 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=93.4
Q ss_pred CcccHHHHH-HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--CCCCCeeeechhh--------------------
Q 042091 638 CRPGVKDAV-KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDA--EANDPNIIEGKVF-------------------- 694 (1023)
Q Consensus 638 lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~~~~~~vi~g~~~-------------------- 694 (1023)
+.+...+++ +++++.|+.+++.||+.+..+..+.++.++..+.. ..++..+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 88999999999999999999999999999877631 1111111111000
Q ss_pred ---h----------------c----cCHHH-------HHHHHh----hceEe------ccCCH--hhHHHHHHHHHhC--
Q 042091 695 ---R----------------A----LSDKE-------REKVAQ----EITVM------GRSSP--NDKLLLVQALRKG-- 730 (1023)
Q Consensus 695 ---~----------------~----l~~~~-------~~~~~~----~~~v~------ar~~P--~~K~~iV~~lq~~-- 730 (1023)
. . ..++. +.+.+. ++.+. -...| ..|...++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 0 01111 111121 11211 12233 3698888888765
Q ss_pred --C---CEEEEEcCCccCHHHhhhCC-ccEEecCCCCHHHHhcc--------Ccccc-CCChhHHHHHHH
Q 042091 731 --G---DVVAVTGDGTNDAPALHEAD-IGLAMGIQGTEVAKENS--------DIIIL-DDNFASVVKVVR 785 (1023)
Q Consensus 731 --g---~~V~~iGDG~ND~~aL~~Ad-vgIamg~~g~~~ak~~a--------diil~-~~~~~~i~~~i~ 785 (1023)
| ..++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-+++.++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 47899999999999999999 699999 9999888743 44433 345667777775
No 87
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.61 E-value=0.00022 Score=78.27 Aligned_cols=139 Identities=14% Similarity=0.216 Sum_probs=86.9
Q ss_pred CCcccHHHHHHHHHh-CCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeee--c----------------------
Q 042091 637 PCRPGVKDAVKLCRD-AGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIE--G---------------------- 691 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~--g---------------------- 691 (1023)
.+-+++.++|+.|++ .|++++++||+....+..+.+.+++.-. ..++..+.+ |
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i--~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLA--GVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEE--EeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 455789999999998 7999999999999999988877764210 000111100 0
Q ss_pred -----------hh------hhccC--HHHHHHHHhh-------ceEe-----ccCCH--hhHHHHHHHHHhC----CCEE
Q 042091 692 -----------KV------FRALS--DKEREKVAQE-------ITVM-----GRSSP--NDKLLLVQALRKG----GDVV 734 (1023)
Q Consensus 692 -----------~~------~~~l~--~~~~~~~~~~-------~~v~-----ar~~P--~~K~~iV~~lq~~----g~~V 734 (1023)
+. ++... .+.+..+... ..+. ....| .+|...++.+.+. ...|
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 00 00011 1111111111 1111 11222 4888888877654 3578
Q ss_pred EEEcCCccCHHHhhhC----CccEEecCCCCHHHHhccCccccCCChhHHHHHH
Q 042091 735 AVTGDGTNDAPALHEA----DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 735 ~~iGDG~ND~~aL~~A----dvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i 784 (1023)
+++||+.||.+|++.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 9999999999999999 9999999 654 44777776 455555555
No 88
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.45 E-value=0.0007 Score=74.70 Aligned_cols=127 Identities=19% Similarity=0.285 Sum_probs=84.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.|++.++++.|+++|+++.++|+.+...+..+..+.|+.... ..++.++... ....
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~----------------~~Kp 158 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP----------------QKKP 158 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC----------------CCCC
Confidence 478999999999999999999999999999999999888885321 1223222210 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEec--C-CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMG--I-QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg--~-~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.|+-=..+.+.+.-..+.++++||+.||..+.+.|++. +++. . ...+..+..+|+++. ++..+..++.
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 22222333333333356799999999999999999973 4433 1 122234457888885 6777765543
No 89
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.41 E-value=0.00068 Score=71.91 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=85.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+.....+..+-+..|+.... ..++.++... .....
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF-----DVVITLDDVE----------------HAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce-----eEEEecCcCC----------------CCCCC
Confidence 47899999999999999999999999999999999999987421 1223222210 01233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EEecCCCC-HHHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG---LAMGIQGT-EVAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg---Iamg~~g~-~~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+--.++++.+......+++|||+.+|..+-++|++- +.-|.... +.....+|+++. ++..+..++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 4444444555544456789999999999999999984 33331112 233456888876 677776655
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.40 E-value=0.00072 Score=71.56 Aligned_cols=123 Identities=17% Similarity=0.212 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.+...+..+.+..|+.... ..++.++... ...-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----SVLIGGDSLA----------------QRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----cEEEecCCCC----------------CCCCC
Confidence 68999999999999999999999999999999999999986421 1233322211 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC--C--CHHHHhccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQ--G--TEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~--g--~~~ak~~adiil~~~~~~~i~~ 782 (1023)
|+-=..+.+.+....+.++++||+.||..+.++|++-...-.. + .+.....+|+++. ++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 2222333333333346699999999999999999987542211 1 1233456888775 4555443
No 91
>PTZ00174 phosphomannomutase; Provisional
Probab=97.40 E-value=0.00078 Score=73.22 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhC-CccEEecCCCCHHHHhccCccc
Q 042091 718 NDKLLLVQALRKGGDVVAVTGD----GTNDAPALHEA-DIGLAMGIQGTEVAKENSDIII 772 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGD----G~ND~~aL~~A-dvgIamg~~g~~~ak~~adiil 772 (1023)
.+|..-++.|.++.+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4788888888777778999999 99999999976 6778888 88888887776543
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.18 E-value=0.0017 Score=69.41 Aligned_cols=119 Identities=15% Similarity=0.225 Sum_probs=79.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
-++.||+.++++.|+++|+++.++|+........+.++.|+.... ..++.+.... ..+-
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF-----DALASAEKLP----------------YSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----cEEEEcccCC----------------CCCC
Confidence 368899999999999999999999999999999999999987532 1233332211 1122
Q ss_pred CHhhHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEEecCCCC---HHHHhccCccccCCChhHH
Q 042091 716 SPNDKLLLVQALRKG---GDVVAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~---g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~---~~ak~~adiil~~~~~~~i 780 (1023)
.|+ -+.+.+++. .+.++++||+.||+.+-+.|++....-..+. +.-...+|+++. ++..+
T Consensus 150 ~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl 215 (222)
T PRK10826 150 HPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTEL 215 (222)
T ss_pred CHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHH
Confidence 232 223333333 3568999999999999999998754431221 122235677765 45544
No 93
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.17 E-value=0.0024 Score=68.64 Aligned_cols=127 Identities=17% Similarity=0.163 Sum_probs=87.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.... ...-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-----AVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-----cEEEecCcCC----------------CCCCC
Confidence 68899999999999999999999999999888888889886421 2333333211 12234
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCC-CC-HHHHhccCccccCCChhHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA---MGIQ-GT-EVAKENSDIIILDDNFASVVKVVRW 786 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa---mg~~-g~-~~ak~~adiil~~~~~~~i~~~i~~ 786 (1023)
|+-=..+++.+.-..+.++|+||+.||..+-+.|++... -|.. .. +.....+|+++. ++..+...+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 444445555555556779999999999999999988743 2211 11 223456898886 66666665543
No 94
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.15 E-value=0.0011 Score=69.84 Aligned_cols=118 Identities=26% Similarity=0.316 Sum_probs=76.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeech-hh-h--------------c----
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGK-VF-R--------------A---- 696 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~-~~-~--------------~---- 696 (1023)
++.+.+.+++++|++.|++++++||+....+..+.++++. .....+++.+.... .. . .
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~--~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL--PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCC--CEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCce
Confidence 5778999999999999999999999999999999988542 11111111111100 00 0 0
Q ss_pred ---c-------------------------CHH---HHHHHHh-------hceEec------cCCH--hhHHHHHHHHHhC
Q 042091 697 ---L-------------------------SDK---EREKVAQ-------EITVMG------RSSP--NDKLLLVQALRKG 730 (1023)
Q Consensus 697 ---l-------------------------~~~---~~~~~~~-------~~~v~a------r~~P--~~K~~iV~~lq~~ 730 (1023)
+ .++ ++.+.+. .+.+.. ...| .+|...++.+.++
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 0 000 1111111 122221 1223 6899999888765
Q ss_pred -C---CEEEEEcCCccCHHHhhhCCccEEe
Q 042091 731 -G---DVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 731 -g---~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
| ..++++||+.||.+|++.+++|+||
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 3 5699999999999999999999997
No 95
>PRK11590 hypothetical protein; Provisional
Probab=97.13 E-value=0.0019 Score=68.43 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=74.9
Q ss_pred CCcccHHHHH-HHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhc-cCHHHHHHHHhhceE-ec
Q 042091 637 PCRPGVKDAV-KLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRA-LSDKEREKVAQEITV-MG 713 (1023)
Q Consensus 637 ~lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~-l~~~~~~~~~~~~~v-~a 713 (1023)
.++|++.+.| +.+++.|+++.++|+-...-+..+++.+|+.... .++ |.+++. ++ -.+ -.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~~i--~t~l~~~~t----------g~~~g~ 157 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----NLI--ASQMQRRYG----------GWVLTL 157 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----ceE--EEEEEEEEc----------cEECCc
Confidence 4689999999 5788899999999999999999999999963210 111 111110 00 011 12
Q ss_pred cCCHhhHHHHHHHH-HhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 714 RSSPNDKLLLVQAL-RKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 714 r~~P~~K~~iV~~l-q~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
.|..+.|..-++.. ........+-||+.||.|||+.|+.+++++
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 46778998877754 333445568899999999999999999986
No 96
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.09 E-value=0.0022 Score=80.77 Aligned_cols=171 Identities=16% Similarity=0.153 Sum_probs=101.4
Q ss_pred HHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeec--cCCCcccHHHHHHHHHh-CCCEEEEECCCCHHHHHHH
Q 042091 594 KAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGI--KDPCRPGVKDAVKLCRD-AGVKVRMVTGDNLQTAKAI 670 (1023)
Q Consensus 594 ~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~i 670 (1023)
+.....|.....|.+++- -|.|++....- ...+.+++.+++++|.+ .|+.|+++||+........
T Consensus 481 ~~~~~~y~~~~~rLi~~D------------~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~ 548 (726)
T PRK14501 481 EEIIARYRAASRRLLLLD------------YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERW 548 (726)
T ss_pred HHHHHHHHhccceEEEEe------------cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHH
Confidence 334444444445656554 45666654211 12367899999999999 6999999999999998887
Q ss_pred HHHcCCCCCCCCCCCCeee-echhhhc-----------------------------------------cCH-------HH
Q 042091 671 ALECGILGSDAEANDPNII-EGKVFRA-----------------------------------------LSD-------KE 701 (1023)
Q Consensus 671 a~~~gi~~~~~~~~~~~vi-~g~~~~~-----------------------------------------l~~-------~~ 701 (1023)
....++. ....++..+. .|..+.. .+. ++
T Consensus 549 ~~~~~l~--liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~ 626 (726)
T PRK14501 549 FGDLPIH--LVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626 (726)
T ss_pred hCCCCeE--EEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHH
Confidence 7655531 0001111110 0000000 000 11
Q ss_pred HHHHHhh------ceEe-------ccCCHhhHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhC---CccEEecCCCCHH
Q 042091 702 REKVAQE------ITVM-------GRSSPNDKLLLVQALRKG--GDVVAVTGDGTNDAPALHEA---DIGLAMGIQGTEV 763 (1023)
Q Consensus 702 ~~~~~~~------~~v~-------ar~~P~~K~~iV~~lq~~--g~~V~~iGDG~ND~~aL~~A---dvgIamg~~g~~~ 763 (1023)
+.+.+.. +.+. -+..-.+|...++.+.+. ...|+++||+.||.+|++.+ +.+|+|| ++
T Consensus 627 l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~--- 702 (726)
T PRK14501 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG--- 702 (726)
T ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC---
Confidence 1111111 1111 112225899999888874 35899999999999999986 6899998 53
Q ss_pred HHhccCccccCCChhHHHHHHH
Q 042091 764 AKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 764 ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+.+|++.+.+. ..+..+++
T Consensus 703 -~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 703 -ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred -CCcceEeCCCH--HHHHHHHH
Confidence 56788888743 55666554
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.06 E-value=0.0026 Score=67.19 Aligned_cols=106 Identities=11% Similarity=0.108 Sum_probs=74.5
Q ss_pred CCcccHHHHHH-HHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVK-LCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++|++.+.|+ .++++|++++++|+-....+..+|+..|+..... + + |.+++.-.. .. ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-----~-i-~t~le~~~g-------g~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-----L-I-ASQIERGNG-------GW-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-----E-E-EEEeEEeCC-------ce-EcCccC
Confidence 47999999996 7888999999999999999999999966643111 1 1 111110000 00 011346
Q ss_pred CHhhHHHHHHHHH-hCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 716 SPNDKLLLVQALR-KGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 716 ~P~~K~~iV~~lq-~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
.-++|.+-++..- .......+-||+.||.|||+.||.+++++
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7789988776543 23344568899999999999999999985
No 98
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.99 E-value=0.0046 Score=68.09 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=82.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.+...+..+-+.+|+.... ..++.++.. ...
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-----~~vi~~~~~-------------------~~k 197 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-----SVVQAGTPI-------------------LSK 197 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-----EEEEecCCC-------------------CCC
Confidence 57899999999999999999999999999999999999986431 123333221 011
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCCCCH--HHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA---MGIQGTE--VAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa---mg~~g~~--~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+-=..+++.+.-..+.++||||+.+|..+-++|++-.. -| .... .....+|+++. ++..+..++
T Consensus 198 ~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 198 RRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 221122222232234569999999999999999988643 22 1222 23456898885 677777655
No 99
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.96 E-value=0.0047 Score=65.78 Aligned_cols=125 Identities=23% Similarity=0.316 Sum_probs=82.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCC--CCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGIL--GSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~--~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
.++.||+.+.++.|+++|+++.++|+-....+..+.+.+|+. ... ..++.+.+.. ..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-----~~i~~~~~~~----------------~~ 144 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-----DAVVCPSDVA----------------AG 144 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-----CEEEcCCcCC----------------CC
Confidence 379999999999999999999999999999999999999986 321 2333333221 01
Q ss_pred cCCHhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEEec-CCCCH----HHHhccCccccCCChhHHHHH
Q 042091 714 RSSPNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIGLAMG-IQGTE----VAKENSDIIILDDNFASVVKV 783 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~AdvgIamg-~~g~~----~ak~~adiil~~~~~~~i~~~ 783 (1023)
+-.|+-=...++.+.-. .+.++|+||+.+|..+-+.|++..+++ ..|.. .....+|+++. ++..+..+
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 22233222233333322 357999999999999999999986322 12221 12345777765 55555443
No 100
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.95 E-value=0.0066 Score=62.01 Aligned_cols=145 Identities=17% Similarity=0.272 Sum_probs=91.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC-----CC-----------------Ceeeechhh
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA-----ND-----------------PNIIEGKVF 694 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~-----~~-----------------~~vi~g~~~ 694 (1023)
.+-||+.++++.+++. ...+++|-...+-+.++|.-+|+....... +. ...++|+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876 456677777888999999999996543211 00 011222211
Q ss_pred --------hccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCC-cc-EEecCCCC
Q 042091 695 --------RALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG---GDVVAVTGDGTNDAPALHEAD-IG-LAMGIQGT 761 (1023)
Q Consensus 695 --------~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~---g~~V~~iGDG~ND~~aL~~Ad-vg-Iamg~~g~ 761 (1023)
..+.+.|..+++.++.+... ..|.++++.+.+. ....+++||++.|..||+.+. -| +|+.-||.
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 00112222223333322222 2444444444442 344689999999999999883 22 44444899
Q ss_pred HHHHhccCccccCCChhHHHHHHH
Q 042091 762 EVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 762 ~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
+-|...||+.+.+.+......+|+
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 999999999999888888777774
No 101
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.92 E-value=0.0064 Score=66.52 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=81.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+.... ..++.+.+.. ...-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F-----d~ii~~~d~~----------------~~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF-----SVVLAAEDVY----------------RGKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC-----cEEEecccCC----------------CCCCC
Confidence 57899999999999999999999999999999999999986532 2445544331 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-EecCCCCHHHHhccCccccCCChhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL-AMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI-amg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
|+-=...++.+.-....++||||..+|..+-+.|++-. ++...........+|+++. ++..+
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 33223334444444566999999999999999999843 2221222222334677765 44444
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.87 E-value=0.0063 Score=66.18 Aligned_cols=117 Identities=18% Similarity=0.141 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+-....+..+-+.+|+.... ..++.+++.. ...-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F-----d~iv~~~~~~----------------~~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF-----QAVIIGSECE----------------HAKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC-----cEEEecCcCC----------------CCCCC
Confidence 57899999999999999999999999999999999999997532 2444444331 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCC-C--HHHHhccCccccC
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQG-T--EVAKENSDIIILD 774 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g-~--~~ak~~adiil~~ 774 (1023)
|+-=....+.+.-..+.++|+||+.+|..+=++|++-...-..+ . +.....+|+++.+
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 44444445555444567999999999999999998853321112 1 2233468888763
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.78 E-value=0.0096 Score=64.94 Aligned_cols=97 Identities=21% Similarity=0.197 Sum_probs=68.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+.... ...++.+++.. ...-.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~~----------------~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDVP----------------AGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccCC----------------CCCCC
Confidence 57899999999999999999999999999999999999987531 12334433321 11223
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|+-=....+.+.-. .+.++||||+.+|..+=+.|++-
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 33323333333322 34599999999999999999964
No 104
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.70 E-value=0.014 Score=63.75 Aligned_cols=130 Identities=13% Similarity=0.180 Sum_probs=82.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCC-------CCCeeeechhhhccCHHHHHHHHhhc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEA-------NDPNIIEGKVFRALSDKEREKVAQEI 709 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~-------~~~~vi~g~~~~~l~~~~~~~~~~~~ 709 (1023)
++|||+.+.++.|++.|+++.++||-....+..+.+++|+....... +..-+.+|..-
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~--------------- 185 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKG--------------- 185 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCC---------------
Confidence 78999999999999999999999999999999999999986433210 01112223110
Q ss_pred eEeccCCHhhHHHHHHH-----HH--hCCCEEEEEcCCccCHHHhhhC---CccEEecC-CCC-----HHHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQA-----LR--KGGDVVAVTGDGTNDAPALHEA---DIGLAMGI-QGT-----EVAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~-----lq--~~g~~V~~iGDG~ND~~aL~~A---dvgIamg~-~g~-----~~ak~~adiil~ 773 (1023)
--.....|.+.+.. ++ .....|.++|||.||+.|..-. .--+.+|- +.. +.-+++-|||+.
T Consensus 186 ---P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 186 ---PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred ---CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 00112355544432 22 2236799999999999995433 11222221 111 225678899999
Q ss_pred CCChhHHHHHH
Q 042091 774 DDNFASVVKVV 784 (1023)
Q Consensus 774 ~~~~~~i~~~i 784 (1023)
+|.=-.++..|
T Consensus 263 ~D~t~~v~~~i 273 (277)
T TIGR01544 263 QDETLEVANSI 273 (277)
T ss_pred CCCCchHHHHH
Confidence 88655555544
No 105
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.69 E-value=0.013 Score=64.53 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=65.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++-||+.++++.|+++|+++.++||.....+..+-+..|+.... ...++.+++. .+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~------------------~~~K 158 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDV------------------PAGR 158 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcC------------------CCCC
Confidence 57899999999999999999999999999888888887775421 0123333221 1122
Q ss_pred HhhHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc
Q 042091 717 PNDKLLLVQALRKGG----DVVAVTGDGTNDAPALHEADI 752 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g----~~V~~iGDG~ND~~aL~~Adv 752 (1023)
|. ..-+.+.+++.| +.++||||+.+|..+-+.|++
T Consensus 159 P~-p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 159 PY-PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred CC-hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 31 222334444432 569999999999999999997
No 106
>PRK11587 putative phosphatase; Provisional
Probab=96.63 E-value=0.013 Score=62.32 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=75.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++.++... ...-.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~----------------~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK----------------RGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc----------------CCCCC
Confidence 5789999999999999999999999887777766667777321 2344443321 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCC-HHHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQGT-EVAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g~-~~ak~~adiil~ 773 (1023)
|+-=....+.+.-..+.++||||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 3333333344443457799999999999999999984 4454 322 223345677665
No 107
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.62 E-value=0.0076 Score=63.01 Aligned_cols=94 Identities=20% Similarity=0.116 Sum_probs=69.6
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
.+++.+++.++++.|+++|+++.++||.....+..+-+.+|+.... ..++.+++. ..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~-----------------~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-----PVQIWMEDC-----------------PPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-----CEEEeecCC-----------------CCC
Confidence 4557778899999999999999999999999999999999987422 233333321 123
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA 750 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~A 750 (1023)
..|+--..+++.+.-..+.++||||+.+|+.+-+.|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 445554555666655567799999999999886654
No 108
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.62 E-value=0.0059 Score=66.31 Aligned_cols=46 Identities=26% Similarity=0.315 Sum_probs=37.0
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEEecCCCCHH
Q 042091 717 PNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV 763 (1023)
Q Consensus 717 P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ 763 (1023)
...|...|+.|+++ .+.|+++||+.||.+||..++-||.+| ++.+.
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 35899999999876 245778999999999999999999999 77776
No 109
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.51 E-value=0.0067 Score=64.96 Aligned_cols=90 Identities=21% Similarity=0.240 Sum_probs=64.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC----HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN----LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+..... ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~------------------ 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP------------------ 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC------------------
Confidence 477889999999999999999999964 669999999999942110 1223333210
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
...+|.. .+++.| .++++||..+|..+-+.|++-.
T Consensus 173 ---~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 ---GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred ---CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 1134444 344445 4889999999999999998753
No 110
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.50 E-value=0.03 Score=57.37 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=34.5
Q ss_pred cHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 641 GVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 641 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 46788999999999999999999999999999999973
No 111
>PRK06769 hypothetical protein; Validated
Probab=96.44 E-value=0.011 Score=60.38 Aligned_cols=113 Identities=13% Similarity=-0.035 Sum_probs=66.5
Q ss_pred CCcEEEeeeeccC----CCcccHHHHHHHHHhCCCEEEEECCCCHH--------HHHHHHHHcCCCCCCCCCCCCeeeec
Q 042091 624 EELILLAIVGIKD----PCRPGVKDAVKLCRDAGVKVRMVTGDNLQ--------TAKAIALECGILGSDAEANDPNIIEG 691 (1023)
Q Consensus 624 ~~l~~lG~i~~~D----~lr~~~~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~~gi~~~~~~~~~~~vi~g 691 (1023)
.|.++.|-..+.+ ++-||+.++++.|++.|+++.++|+.... ......+..|+...... ....+
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~~~~~ 86 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC----PHKHG 86 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC----cCCCC
Confidence 5556655544332 36899999999999999999999987631 12233344555421000 00000
Q ss_pred hhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 692 KVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 692 ~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
++.. ..+-.|+-=..+++.+...-+.++||||..+|..+=++|++-...
T Consensus 87 ~~~~----------------~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 87 DGCE----------------CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCC----------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 0000 012233333444444443446799999999999999999886543
No 112
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.43 E-value=0.0078 Score=64.50 Aligned_cols=89 Identities=21% Similarity=0.224 Sum_probs=64.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC----CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD----NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+.... ..++.++...
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----~~i~~~d~~~----------------- 171 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----PVIFAGDKPG----------------- 171 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----eEEECCCCCC-----------------
Confidence 34555999999999999999999998 677999999999996421 2333333221
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
...| +|. ..+++.| .++|+||..||..+-+.|++-
T Consensus 172 -~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 -QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred -CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 1112 232 2445555 478999999999999999764
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.23 E-value=0.019 Score=59.95 Aligned_cols=95 Identities=14% Similarity=0.202 Sum_probs=67.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+-+......+.+.+|+.... ..++..++. ....
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~------------------~~~K 148 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-----DAVLSADAV------------------RAYK 148 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-----heeEehhhc------------------CCCC
Confidence 57899999999999999999999999999999999999985321 123333222 1223
Q ss_pred Hhh--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 PND--KLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P~~--K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
|.- =..+.+.+.-.-+.++++||+.+|+.+-+.|++-.
T Consensus 149 P~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 149 PAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred CCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 321 12333334333467899999999999999988753
No 114
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.05 E-value=0.014 Score=60.10 Aligned_cols=94 Identities=15% Similarity=0.225 Sum_probs=61.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+.... ..++++.+.. ..+..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF-----DAIVDPAEIK----------------KGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC-----cEEEehhhcC----------------CCCCC
Confidence 6789999999999999999999997532 45677888876421 2333333221 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|+-=....+.+.-..+.++||||+.+|+.+-+.|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2222223333332335689999999999999999874
No 115
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.04 E-value=0.016 Score=57.71 Aligned_cols=104 Identities=19% Similarity=0.175 Sum_probs=74.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcC----CCCCCCC-CCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECG----ILGSDAE-ANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g----i~~~~~~-~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
.++|+-++.++.+++.+++++++|+--.--...+-..++ |..-... .+..+-.+|+-.. +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 589999999999999999999999988877777777765 2211100 0111112222111 1
Q ss_pred ecc--CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 712 MGR--SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 712 ~ar--~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
+.. .--.+|...|+.+++..+.+.++|||+.|..|-+.+|+-+|
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 111 12358999999999999999999999999999998888775
No 116
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.04 E-value=0.033 Score=66.37 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=83.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+++.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f-----~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV-----TETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc-----ceeEecCCCC-----------------CCCC
Confidence 68899999999999999999999999999999999999986421 2334443321 1123
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecC-CCCHHHHhccCccccCCChhHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGI-QGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~-~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
|+-=...++.+ ..+.++|+||+.+|..+-+.|++- |++.. .+.+.....+|+++. ++..+..++.
T Consensus 388 P~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 33212222222 235699999999999999999973 33321 122222345788875 6777766654
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.03 E-value=0.021 Score=60.73 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=67.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+-+...+....+.+|+.... ..++.+.+. .+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~------------------~~~K 150 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-----DAVITSEEE------------------GVEK 150 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-----cEEEEeccC------------------CCCC
Confidence 58899999999999999999999999988888888899986422 123333322 1223
Q ss_pred H--hhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc
Q 042091 717 P--NDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG 753 (1023)
Q Consensus 717 P--~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg 753 (1023)
| +-=..+.+.+.-....++|+||.. +|..+-+.|++-
T Consensus 151 P~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 151 PHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 3 222223333333345799999998 999999999874
No 118
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.03 E-value=0.047 Score=56.24 Aligned_cols=128 Identities=16% Similarity=0.156 Sum_probs=72.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL---------------QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
.+.||+.++++.|+++|+++.++|..+. .....+-+..|+... .++....... + +
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~~--~-~ 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHPE--D-G 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCCC--C-C
Confidence 4679999999999999999999998763 111223334555210 1111000000 0 0
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC-CCCH---HHHhcc--CccccCC
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGI-QGTE---VAKENS--DIIILDD 775 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~-~g~~---~ak~~a--diil~~~ 775 (1023)
.-...-.|+--..+++.+.-..+.++||||+.+|..+-+.|++. +++. .|.. .....+ |+++.
T Consensus 99 --------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~-- 167 (181)
T PRK08942 99 --------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD-- 167 (181)
T ss_pred --------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--
Confidence 00112234433444555544457799999999999999999974 2221 2221 122335 77765
Q ss_pred ChhHHHHHHH
Q 042091 776 NFASVVKVVR 785 (1023)
Q Consensus 776 ~~~~i~~~i~ 785 (1023)
++..+..++.
T Consensus 168 ~l~el~~~l~ 177 (181)
T PRK08942 168 SLADLPQALK 177 (181)
T ss_pred CHHHHHHHHH
Confidence 5666666553
No 119
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.99 E-value=0.052 Score=62.05 Aligned_cols=121 Identities=16% Similarity=0.181 Sum_probs=82.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+.....+..+-+..||.... ..++.+++.. ...-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF-----d~Iv~sddv~----------------~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF-----SVIVAAEDVY----------------RGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc-----eEEEecCcCC----------------CCCCC
Confidence 47899999999999999999999999999999999999997432 2344444321 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHH-HhccCccccCCChhHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVA-KENSDIIILDDNFASV 780 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~a-k~~adiil~~~~~~~i 780 (1023)
|+-=...++.+.-....++|+||..+|+.|-+.|++-...-..+.... ...+|+++. ++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 333334444554456789999999999999999998543221222222 234777765 45444
No 120
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.95 E-value=0.032 Score=57.20 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=64.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...- ..++.+.+.. ...-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF-----DVVIFSGDVG----------------RGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC-----CEEEEcCCCC----------------CCCCC
Confidence 688999999999999999999999988877 6666668886421 2333332211 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI 752 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv 752 (1023)
|+-=..+.+.+.-....++++||...|+.+-+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333334444444445779999999999999888876
No 121
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.90 E-value=0.054 Score=54.38 Aligned_cols=102 Identities=22% Similarity=0.335 Sum_probs=67.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHH---HHHHHc---C--CCCCCCCCCCCeeeech-hhhccCHHHHHHH
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAK---AIALEC---G--ILGSDAEANDPNIIEGK-VFRALSDKEREKV 705 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~---g--i~~~~~~~~~~~vi~g~-~~~~l~~~~~~~~ 705 (1023)
+|...+++++++++++++|++++++||+....+. ....++ | +.. ..++..+. .+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~~------ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALHR------ 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhhc------
Confidence 5788999999999999999999999999999885 444442 2 321 11222211 1110100
Q ss_pred HhhceEeccCCHh-hHHHHHHHHHh-----CCCEEEEEcCCccCHHHhhhCCcc
Q 042091 706 AQEITVMGRSSPN-DKLLLVQALRK-----GGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 706 ~~~~~v~ar~~P~-~K~~iV~~lq~-----~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.+. ...|+ .|...++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 ----e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ----EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 112 23344 48888887777 346778899999999998877654
No 122
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.90 E-value=0.034 Score=59.49 Aligned_cols=95 Identities=9% Similarity=0.026 Sum_probs=67.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+.... ..++.+.+. .+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~iv~s~~~------------------~~~K 149 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-----DLLLSTHTF------------------GYPK 149 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-----CEEEEeeeC------------------CCCC
Confidence 67899999999999999999999999888888888888886421 133333222 1222
Q ss_pred H--hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 P--NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P--~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
| +-=..+.+.+.-..+.++|+||+.+|+.+-+.|++..
T Consensus 150 P~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 150 EDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 3 2222222333333456999999999999999999963
No 123
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.76 E-value=0.038 Score=53.59 Aligned_cols=93 Identities=20% Similarity=0.157 Sum_probs=65.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCC--------HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDN--------LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ 707 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~ 707 (1023)
-++.|++.++++.|+++|+++.++|+.. ......+.+.+|+... ...+.+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~-------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H-------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C--------------
Confidence 3678999999999999999999999998 7778888888888521 011111 0
Q ss_pred hceEeccCCHhhHHHHHHHHH-hCCCEEEEEcC-CccCHHHhhhCCcc
Q 042091 708 EITVMGRSSPNDKLLLVQALR-KGGDVVAVTGD-GTNDAPALHEADIG 753 (1023)
Q Consensus 708 ~~~v~ar~~P~~K~~iV~~lq-~~g~~V~~iGD-G~ND~~aL~~Advg 753 (1023)
...-.|+-=..+++.++ -..+.++|+|| ..+|..+-+.+++-
T Consensus 83 ----~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ----CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ----CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01222332234444442 34567999999 59999999988764
No 124
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.70 E-value=0.025 Score=63.40 Aligned_cols=108 Identities=15% Similarity=0.027 Sum_probs=76.0
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 634 IKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 634 ~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... .. +.|.+. ...+.+-.--.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f----~~-i~~~~~--------~~~~~~~~~~~ 250 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF----DD-LIGRPP--------DMHFQREQGDK 250 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch----hh-hhCCcc--------hhhhcccCCCC
Confidence 567999999999999999999999999999999999999998874111 00 011100 00000000012
Q ss_pred cCCHhhHHHHHHHHHh-CCCEEEEEcCCccCHHHhhhCCccE
Q 042091 714 RSSPNDKLLLVQALRK-GGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
+-.|+-+...++.+-. .-..++|+||..+|+.+-+.|++-.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 4556777777766543 2378999999999999999999874
No 125
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.70 E-value=0.022 Score=57.53 Aligned_cols=97 Identities=18% Similarity=0.243 Sum_probs=70.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.|++.+.++.|++.|++++++|+..........+.+|+.... ..++...+... ...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f-----~~i~~~~~~~~----------------~Kp 134 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF-----DEIISSDDVGS----------------RKP 134 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC-----SEEEEGGGSSS----------------STT
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc-----ccccccchhhh----------------hhh
Confidence 378999999999999999999999999999999999999987321 13333332210 112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.|+-=..+++.+.-..+.+++|||+..|..+-++|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22333344444444456799999999999999998864
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.62 E-value=0.027 Score=57.93 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=62.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+++|+++.++|+. ..+..+-+.+|+.... ..++.+... .+..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-----~~v~~~~~~------------------~~~k 142 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-----DAIVDADEV------------------KEGK 142 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-----CEeeehhhC------------------CCCC
Confidence 68999999999999999999999987 5677777888886321 122222211 1122
Q ss_pred HhhH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 042091 717 PNDK--LLLVQALRKGGDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K--~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
|... ....+.+.-..+.++++||+.+|..+-+.|++.
T Consensus 143 p~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 143 PHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 3211 222233322345688999999999999999875
No 127
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.55 E-value=0.044 Score=58.23 Aligned_cols=122 Identities=11% Similarity=0.078 Sum_probs=75.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.|++.+.++.|++. +++.++|+-....+..+.+++|+.... ..++.+.+.. ..+-.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----DDIFVSEDAG----------------IQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----CEEEEcCccC----------------CCCCC
Confidence 5789999999999999 999999999999999999999986422 1222222110 01122
Q ss_pred HhhHHHHHHHH-HhCCCEEEEEcCCc-cCHHHhhhCCccE-EecC-CCCHHHHhccCccccCCChhHHHH
Q 042091 717 PNDKLLLVQAL-RKGGDVVAVTGDGT-NDAPALHEADIGL-AMGI-QGTEVAKENSDIIILDDNFASVVK 782 (1023)
Q Consensus 717 P~~K~~iV~~l-q~~g~~V~~iGDG~-ND~~aL~~AdvgI-amg~-~g~~~ak~~adiil~~~~~~~i~~ 782 (1023)
|+-=...++.+ .-..+.+++|||+. +|..+=+.+++-. .... ...+.....+|.++. ++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 22223333434 32345699999998 8999999999633 2221 111112234566654 4555543
No 128
>PLN02580 trehalose-phosphatase
Probab=95.52 E-value=0.088 Score=60.17 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHhC-C-----C-EEEEEcCCccCHHHhhh-----CCccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G-----D-VVAVTGDGTNDAPALHE-----ADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g-----~-~V~~iGDG~ND~~aL~~-----AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
.+|...|+.+.+. | . .++++||+.||..|++. +++||+|| ++.. ...|++.+. +-..+..+++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHHHHHHHHH
Confidence 4999998888764 2 1 25899999999999996 69999999 6543 235788876 5566666653
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.51 E-value=0.074 Score=54.23 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=72.9
Q ss_pred EEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCC-CHHHHHHHHHHcCCCCCCCC----CCCCeeeechhhhccCHHH
Q 042091 627 ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGD-NLQTAKAIALECGILGSDAE----ANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 627 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~gi~~~~~~----~~~~~vi~g~~~~~l~~~~ 701 (1023)
......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+...... .....++.+.+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~------- 107 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKP------- 107 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCC-------
Confidence 455555566688999999999999999999999976 88899999999998521100 000111211110
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRKG------GDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~~------g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
. .|..=..+.+.+.+. -+.++|+||...|+.+-++|++-...-
T Consensus 108 -----------~--~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 108 -----------N--KAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred -----------c--hHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 0 011112334444332 357999999999999999998866543
No 130
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.33 E-value=0.073 Score=59.16 Aligned_cols=118 Identities=17% Similarity=0.145 Sum_probs=74.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.+.++.|++.|+++.++|+-+......+-+..+..... ....++.+.+.. ...-.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~---~~~~~v~~~~~~----------------~~KP~ 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA---QGLDVFAGDDVP----------------KKKPD 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc---CceEEEeccccC----------------CCCCC
Confidence 58899999999999999999999999888887776655322110 001122332211 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCH--HHHhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~--~ak~~adiil~ 773 (1023)
|+-=..+.+.+.-....++||||+.+|..+-+.|++.......|.. .....+|+++.
T Consensus 205 p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 3333444444544456799999999999999999987554323221 11235777765
No 131
>PLN02940 riboflavin kinase
Probab=95.29 E-value=0.067 Score=62.01 Aligned_cols=97 Identities=20% Similarity=0.187 Sum_probs=67.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHH-HcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIAL-ECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.||+.+.++.|++.|+++.++|+.....+...-+ ..|+.... ..++.+++.. ...-
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F-----d~ii~~d~v~----------------~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF-----SVIVGGDEVE----------------KGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC-----CEEEehhhcC----------------CCCC
Confidence 577999999999999999999999998888776655 57775321 2344444321 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.|+-=..+++.+.-..+.++|+||+.+|..+-+.|++..
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 233323334444334567999999999999999999864
No 132
>PRK09449 dUMP phosphatase; Provisional
Probab=95.18 E-value=0.1 Score=55.60 Aligned_cols=124 Identities=12% Similarity=0.112 Sum_probs=76.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|+ +|+++.++|......+...-+..|+...- ..++.+.+.. ...-.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~----------------~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-----DLLVISEQVG----------------VAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-----CEEEEECccC----------------CCCCC
Confidence 47899999999999 68999999999888888888888886421 1233332211 01112
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCc-cCHHHhhhCCcc-EEecCCCCH-HHHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKG-GDVVAVTGDGT-NDAPALHEADIG-LAMGIQGTE-VAKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~-g~~V~~iGDG~-ND~~aL~~Advg-Iamg~~g~~-~ak~~adiil~~~~~~~i~~~i 784 (1023)
|+-=..+++.+.-. .+.+++|||+. +|+.+=+.|++- |.+...+.. .....+|+++. ++..+..++
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 22222233333211 25699999998 799999999985 333311211 11124677775 566666554
No 133
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.73 E-value=0.09 Score=53.60 Aligned_cols=85 Identities=22% Similarity=0.182 Sum_probs=60.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN-LQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~--------------------------------~~~~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL--------------------------------PHAV 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE--------------------------------cCCC
Confidence 678999999999999999999999988 6777888888887520 0112
Q ss_pred CH--hhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc
Q 042091 716 SP--NDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG 753 (1023)
Q Consensus 716 ~P--~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg 753 (1023)
.| +-=..+.+.+.-..+.++||||.. .|..+-+.|++-
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 23 211222222222345699999998 799999999874
No 134
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.52 E-value=0.12 Score=51.29 Aligned_cols=98 Identities=21% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL---------------QTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
++.||+.++++.|+++|+++.++|.... ..+..+.+.+|+.... .+.+.....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~----- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-------VLFCPHHPA----- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEECCCCCC-----
Confidence 4789999999999999999999998763 4556667778875210 000000000
Q ss_pred HHHHHhhceEeccCCHhhH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 702 REKVAQEITVMGRSSPNDK--LLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K--~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.-.....|.-+ ..+++.+.-..+.++||||...|..+-+.+++-.
T Consensus 95 --------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 --------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000123211 2222223223466999999999999988888753
No 135
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.44 E-value=0.15 Score=50.35 Aligned_cols=108 Identities=19% Similarity=0.242 Sum_probs=76.0
Q ss_pred HHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCC
Q 042091 597 VDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 597 ~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
.+.+..+|++.+.+- -|-|+++.= ....-|++++-++.++++|+++.++|.-++..+..+++.+|+
T Consensus 20 ~~~L~~~Gikgvi~D------------lDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 20 PDILKAHGIKGVILD------------LDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred HHHHHHcCCcEEEEe------------ccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 456777888887765 233444432 235678899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCC
Q 042091 677 LGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKG---GDVVAVTGDGT-NDAPALHEAD 751 (1023)
Q Consensus 677 ~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~---g~~V~~iGDG~-ND~~aL~~Ad 751 (1023)
.. ++--..|-.+ .+-+++++. -+.|+||||.. -|+-+=+.|+
T Consensus 86 ~f--------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 86 PF--------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred ce--------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 73 2222334433 344555554 57899999984 4766544443
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.42 E-value=0.13 Score=53.92 Aligned_cols=95 Identities=13% Similarity=0.108 Sum_probs=60.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++-||+.++++.|+++|+++.++|+-.. ......+.+|+.... ..++...+.. ...-+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~f-----d~i~~s~~~~----------------~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLLEYF-----DFVVTSYEVG----------------AEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcHHhc-----ceEEeecccC----------------CCCCC
Confidence 5789999999999999999999997654 346677778875321 1222222110 01122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCcc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEADIG 753 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~Advg 753 (1023)
|+-=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 2211222233332346799999997 899988888753
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.35 E-value=0.19 Score=54.78 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=58.9
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
..++-|++.+.++.+++.|+++.++|+..... +...-+..|+..... . .+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d------------------------~l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---E------------------------HL 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---c------------------------eE
Confidence 34678999999999999999999999987443 345556778863211 0 12
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 042091 712 MGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPAL 747 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL 747 (1023)
+.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 333222345555556655556799999999998653
No 138
>PLN03017 trehalose-phosphatase
Probab=94.06 E-value=0.69 Score=52.59 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=38.7
Q ss_pred CCcEEEeeeeccC--CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHH
Q 042091 624 EELILLAIVGIKD--PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA 671 (1023)
Q Consensus 624 ~~l~~lG~i~~~D--~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia 671 (1023)
-|.||+-++.-.| .+-++..++|++|. .|+.+.++||+.......+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 5677776665434 47789999999999 78999999999999999884
No 139
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.97 E-value=0.24 Score=50.69 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=24.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNL 664 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 664 (1023)
++.|++.++++.|+++|+++.++|.-+.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3578999999999999999999997663
No 140
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.76 E-value=0.22 Score=49.49 Aligned_cols=91 Identities=21% Similarity=0.258 Sum_probs=58.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +.... ..++..... .....
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----~~i~~~~~~-----------------~~Kp~ 120 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----DLILGSDEF-----------------GAKPE 120 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----cEEEecCCC-----------------CCCcC
Confidence 44589999999999999999999999999988887775 33211 112111111 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEAD 751 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Ad 751 (1023)
|+-=..+.+.+.-.. .++++||+.+|..+-+.|+
T Consensus 121 ~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 222222223332224 7999999999999877764
No 141
>PLN02811 hydrolase
Probab=93.73 E-value=0.19 Score=53.41 Aligned_cols=98 Identities=15% Similarity=0.253 Sum_probs=60.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHH-HHHHcCCCCCCCCCCCCeeeech--hhhccCHHHHHHHHhhceEec
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKA-IALECGILGSDAEANDPNIIEGK--VFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~~gi~~~~~~~~~~~vi~g~--~~~~l~~~~~~~~~~~~~v~a 713 (1023)
++.||+.+.++.|++.|+++.++||-....... ..+..++... ...++.+. +.. ..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~~----------------~~ 136 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEVK----------------QG 136 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhcc----------------CC
Confidence 578999999999999999999999977654432 2222233321 11233333 110 01
Q ss_pred cCCHhhHHHHHHHHH---hCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 714 RSSPNDKLLLVQALR---KGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq---~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.-.|+-=...++.+. -..+.++||||+..|+.+-+.|++-..
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 122322233444443 224679999999999999999998543
No 142
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.65 E-value=0.31 Score=52.11 Aligned_cols=103 Identities=21% Similarity=0.278 Sum_probs=68.8
Q ss_pred CCcccHHHHHHHH--HhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH-HhhceEec
Q 042091 637 PCRPGVKDAVKLC--RDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV-AQEITVMG 713 (1023)
Q Consensus 637 ~lr~~~~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~-~~~~~v~a 713 (1023)
|+.|+.+++++.+ ++.|+.++++|--|..--..+=+.-|+..... .+.+.+..-. ++-...+ ..+.+-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~-----~I~TNpa~~~--~~G~l~v~pyh~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS-----EIFTNPACFD--ADGRLRVRPYHSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc-----eEEeCCceec--CCceEEEeCccCCCCC
Confidence 7889999999999 56899999999999999999999999874321 1121111000 0000000 00001234
Q ss_pred cCCH-hhHHHHHHHHHhC----C---CEEEEEcCCccCHHH
Q 042091 714 RSSP-NDKLLLVQALRKG----G---DVVAVTGDGTNDAPA 746 (1023)
Q Consensus 714 r~~P-~~K~~iV~~lq~~----g---~~V~~iGDG~ND~~a 746 (1023)
+|.| .=|..+++.+++. | ..|.++|||.||-..
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 5544 4799999888775 4 689999999999764
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.62 E-value=0.091 Score=52.21 Aligned_cols=93 Identities=15% Similarity=-0.009 Sum_probs=66.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...++.+++. .+.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~------------------~~~ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDEC------------------VFV 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECccc------------------ccc
Confidence 368999999999999 57999999999999999999999885311 1223333332 112
Q ss_pred CHhhHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRK---GGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~---~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.|. +.+.++. ..+.+.++||..+|..+-++|+|-|.
T Consensus 101 KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 232 4444443 35679999999999998777766553
No 144
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=93.61 E-value=0.25 Score=62.88 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=38.6
Q ss_pred CCcEEEeeeeccCCCcccHHHHHHHH-HhCCCEEEEECCCCHHHHHHHHHHc
Q 042091 624 EELILLAIVGIKDPCRPGVKDAVKLC-RDAGVKVRMVTGDNLQTAKAIALEC 674 (1023)
Q Consensus 624 ~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~~~ 674 (1023)
-|.|++-.....-.+.++..+++++| ++.|+.|.++||+...+....-..+
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45555533322335668999999997 7889999999999999998877543
No 145
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.47 E-value=0.54 Score=50.87 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=60.0
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHH--HHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAK--AIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ 707 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~ 707 (1023)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+..+. ...+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~----~~~Ii~s~~~------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL----PEMIISSGEI------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc----cceEEccHHH-------------
Confidence 444456778999999999999999999999996554443 556788886311 1122222211
Q ss_pred hceEeccCCHhhHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCC
Q 042091 708 EITVMGRSSPNDKLLLVQALRK---GGDVVAVTGDGTNDAPALHEAD 751 (1023)
Q Consensus 708 ~~~v~ar~~P~~K~~iV~~lq~---~g~~V~~iGDG~ND~~aL~~Ad 751 (1023)
...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 -----------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -----------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -----------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 01112222232 2467999999999998886543
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.36 E-value=0.38 Score=51.09 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=57.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|+..- ..+++.+..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d------------------ 175 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLED------------------ 175 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCC------------------
Confidence 3888999999999999999999999999765 3233345676531 1122222100
Q ss_pred ccCC-HhhHHHHHHHHHhCCC-EEEEEcCCccCHH
Q 042091 713 GRSS-PNDKLLLVQALRKGGD-VVAVTGDGTNDAP 745 (1023)
Q Consensus 713 ar~~-P~~K~~iV~~lq~~g~-~V~~iGDG~ND~~ 745 (1023)
.+.+ -+-|.+.-+.+.+.|+ +++.+||-.+|..
T Consensus 176 ~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 176 SNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0111 1227777777777776 5678999998873
No 147
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.25 E-value=0.2 Score=50.61 Aligned_cols=96 Identities=20% Similarity=0.089 Sum_probs=59.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCC---------------HHHHHHHHHHcCCCCCCCCCCCCeeee----chhhhcc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDN---------------LQTAKAIALECGILGSDAEANDPNIIE----GKVFRAL 697 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~~gi~~~~~~~~~~~vi~----g~~~~~l 697 (1023)
++-|++.++++.|+++|+++.++|.-. ...+..+.+++|+.-. ..++. .++.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~~~~~~~~~~--- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLICPHFPDDNC--- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEECCCCCCCCC---
Confidence 467899999999999999999999742 3456666777777510 01111 0110
Q ss_pred CHHHHHHHHhhceEeccCCHhh--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 698 SDKEREKVAQEITVMGRSSPND--KLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 698 ~~~~~~~~~~~~~v~ar~~P~~--K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
....|.. =..+++.+.-....+.||||+.+|..+-+.|++-...
T Consensus 100 ---------------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 100 ---------------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0112321 1122222222235699999999999999999887543
No 148
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.76 E-value=0.14 Score=55.57 Aligned_cols=68 Identities=18% Similarity=0.149 Sum_probs=50.7
Q ss_pred ccCCHhhHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC--------CccEEecCCCCHHHHhccCccccCCChhHH
Q 042091 713 GRSSPNDKLLLVQALRKG----GDVVAVTGDGTNDAPALHEA--------DIGLAMGIQGTEVAKENSDIIILDDNFASV 780 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~----g~~V~~iGDG~ND~~aL~~A--------dvgIamg~~g~~~ak~~adiil~~~~~~~i 780 (1023)
.+..+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+ .+. .+..|++++. +...+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLT--GPQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCC--CHHHH
Confidence 345577898888887664 34799999999999999999 5888885 332 3567898887 56666
Q ss_pred HHHHH
Q 042091 781 VKVVR 785 (1023)
Q Consensus 781 ~~~i~ 785 (1023)
...++
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 66553
No 149
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.44 E-value=1.8 Score=47.24 Aligned_cols=41 Identities=34% Similarity=0.347 Sum_probs=33.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILG 678 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~ 678 (1023)
+=|++.++|+.|+++|++++++||.+..+ .....+++|+..
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 78899999999999999999999977776 444455678753
No 150
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.42 E-value=0.3 Score=51.95 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=64.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.| ++++.++|+.....+...-+..|+...-. ..++.+.+... .+-.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~----~~v~~~~~~~~----------------~KP~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP----DKLFSGYDIQR----------------WKPD 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc----ceEeeHHhcCC----------------CCCC
Confidence 5678999999998 48999999999888888878888864211 13444433210 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
|+-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2222333333333345689999999999999999987753
No 151
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.40 E-value=0.39 Score=62.88 Aligned_cols=136 Identities=18% Similarity=0.200 Sum_probs=87.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
.+.||+.+.++.|+++|+++.++|+-....+..+-++.|+.... ...++.+++... ..-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~~~----------------~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAFEN----------------LKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECccccc----------------CCCC
Confidence 36799999999999999999999999999999888999985211 123444433210 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCC---CHHHHhccCccccCCChhHHHHHHHHHHHHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIG-LAMGIQG---TEVAKENSDIIILDDNFASVVKVVRWGRSVFA 792 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Advg-Iamg~~g---~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~ 792 (1023)
|+-=....+.+.-..+.++++||..+|+.+-+.|++- |.+. .+ .+.....+|+++.+-.--++..++..|-..+.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~ 299 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATP 299 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCC
Confidence 3222334444444456799999999999999999883 3333 22 22344567888764433345555554444444
Q ss_pred h
Q 042091 793 N 793 (1023)
Q Consensus 793 ~ 793 (1023)
|
T Consensus 300 ~ 300 (1057)
T PLN02919 300 N 300 (1057)
T ss_pred C
Confidence 3
No 152
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.37 E-value=0.34 Score=46.83 Aligned_cols=39 Identities=8% Similarity=0.108 Sum_probs=34.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC-CHHHHHHHHHHcC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD-NLQTAKAIALECG 675 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~g 675 (1023)
++.+|+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777777766
No 153
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.21 E-value=0.32 Score=51.70 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=65.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcC---CCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceE
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECG---ILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITV 711 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g---i~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v 711 (1023)
+-++.||+.++++.|+++|+++.++|..+......+-+..+ +..... ..++. .+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~-----~~fd~------------------~~ 149 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFS-----GYFDT------------------TV 149 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcc-----eEEEe------------------Cc
Confidence 34799999999999999999999999998887777665542 221000 00100 11
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe
Q 042091 712 MGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAM 756 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIam 756 (1023)
...-.|+-=..+.+.+.-..+.++++||...|+.+-++|++-...
T Consensus 150 g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 150 GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 112233332344444443446799999999999999999986543
No 154
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.02 E-value=0.25 Score=52.13 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=57.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHH--HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEecc
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQT--AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGR 714 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar 714 (1023)
++.|++.+.++.|+++|+++.++|...... ........++.... ..++...+.. ...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~~~----------------~~K 152 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----DAVVESCLEG----------------LRK 152 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----CEEEEeeecC----------------CCC
Confidence 678999999999999999999999875433 22222233442211 1122111110 012
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 715 SSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 715 ~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
-.|+-=..+.+.+.-....++||||...|+.+=++|++-.
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 2233223333333333456899999999999999998853
No 155
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.58 E-value=0.54 Score=53.53 Aligned_cols=97 Identities=25% Similarity=0.182 Sum_probs=59.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGD---------------NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKE 701 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~ 701 (1023)
++.|++.++++.|+++|+++.++|.- ....+..+.+..|+... ...+...... +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~~~~s---d-- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICPHFPE---D-- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeCCcCc---c--
Confidence 68999999999999999999999982 23345566677777410 1111100000 0
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHH-Hh---CCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQAL-RK---GGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~l-q~---~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
...+| .|. ..++..+ ++ ....+.||||+.+|..+-+.|++-..
T Consensus 99 --------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00111 222 2233222 22 24679999999999999999988754
No 156
>PLN02423 phosphomannomutase
Probab=91.56 E-value=1.3 Score=48.13 Aligned_cols=39 Identities=31% Similarity=0.352 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHhCCCEEEEEcC----CccCHHHhhh-CCccEEec
Q 042091 718 NDKLLLVQALRKGGDVVAVTGD----GTNDAPALHE-ADIGLAMG 757 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGD----G~ND~~aL~~-AdvgIamg 757 (1023)
.+|..-++.|+ ....|+++|| |.||.+||+. --.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 48888888888 6778999999 8999999997 67788875
No 157
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.49 E-value=0.66 Score=46.84 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=63.2
Q ss_pred cCCCcccHHHHHHHHHhCCC--EEEEECCC-------CHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH
Q 042091 635 KDPCRPGVKDAVKLCRDAGV--KVRMVTGD-------NLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV 705 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi--~v~mlTGD-------~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~ 705 (1023)
++.+-|+..+.+++|++.+. +|.++|-- +...|..+++.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 56788999999999999987 49999986 4889999999999861
Q ss_pred HhhceEeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCc-cCHHH
Q 042091 706 AQEITVMGRSSPNDKLLLVQALRKG-----GDVVAVTGDGT-NDAPA 746 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~-ND~~a 746 (1023)
-.+..-.|.-..++.+.++.+ -+.++||||-. -|+-+
T Consensus 110 ----l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 110 ----LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred ----EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 113345787777888888765 56799999973 35554
No 158
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.93 E-value=0.82 Score=46.38 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=57.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHH------------HHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQ------------TAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKV 705 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~ 705 (1023)
+-||+.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-------~~ii~~~~~~---------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-------QVLAATHAGL---------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-------EEEEecCCCC----------
Confidence 4489999999999999999999975442 4566778888742 1122111100
Q ss_pred HhhceEeccCCHhhHHHHHHHHH--hCCCEEEEEcCCc--------cCHHHhhhCCccE
Q 042091 706 AQEITVMGRSSPNDKLLLVQALR--KGGDVVAVTGDGT--------NDAPALHEADIGL 754 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq--~~g~~V~~iGDG~--------ND~~aL~~AdvgI 754 (1023)
...-.|+-=..+.+.+. -..+.++||||.. +|..+-++|++-.
T Consensus 106 ------~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 106 ------YRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ------CCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 00111222122333332 2235699999986 6998888887654
No 159
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=90.53 E-value=0.51 Score=43.55 Aligned_cols=49 Identities=20% Similarity=0.265 Sum_probs=36.3
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHH---HHcCCCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA---LECGILG 678 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~~ 678 (1023)
|++...+.+=|++.++|+.|+++|++++++|-....+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 445557788899999999999999999999998866655555 5567763
No 160
>PRK10444 UMP phosphatase; Provisional
Probab=90.47 E-value=2 Score=46.59 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=41.0
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc---CCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC---GIL 677 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~---gi~ 677 (1023)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 445556678899999999999999999999999999888888874 663
No 161
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=90.41 E-value=2 Score=44.01 Aligned_cols=52 Identities=29% Similarity=0.364 Sum_probs=44.2
Q ss_pred EEEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH---cCCCC
Q 042091 627 ILLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE---CGILG 678 (1023)
Q Consensus 627 ~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~---~gi~~ 678 (1023)
.+-|.+.++|..-|++.||++.|++++.+|..+|.-..+.-..+.++ ||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 46799999999999999999999999999999988777776666655 56653
No 162
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.94 E-value=0.76 Score=48.00 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=58.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE-CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
++.|++.++++.|+++|+++.++|.-+.......-.. .++... ...++...+. ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~------------------~~~ 140 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDL------------------GMR 140 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEeccc------------------CCC
Confidence 4789999999999999999999999776654432222 233211 0112222211 112
Q ss_pred CH--hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 716 SP--NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 716 ~P--~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
.| +-=..+++.+.-..+.++++||...|+.+-++|++-.
T Consensus 141 KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 23 2222333333333466899999999999999998854
No 163
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.85 E-value=0.85 Score=51.58 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=67.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH----cCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE----CGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
++.++++++++.|+++|+.+.++|.-+...+..+-+. +|+...-. .+ .+-
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~------~~--------------------~~~ 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD------AR--------------------SIN 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee------EE--------------------EEe
Confidence 4578999999999999999999999999999999888 77753110 00 011
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 042091 713 GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg 757 (1023)
....|+.=..+.+.+.-.-..++|+||...|..+.+.+...+.+.
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 122233333333333333467999999999999999988876543
No 164
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=89.82 E-value=4.6 Score=48.30 Aligned_cols=156 Identities=10% Similarity=0.013 Sum_probs=86.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH-cCCCCCCC---CCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE-CGILGSDA---EANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~---~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+++++.+.+ ++.|.+ +++|+-...-++.+|++ +|++.--. +....-.++|.-.. .
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 666655544 567754 99999999999999988 89973100 00001122222100 0
Q ss_pred -cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHH
Q 042091 714 -RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFA 792 (1023)
Q Consensus 714 -r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~ 792 (1023)
.+.-++|.+-++..........+-||+.||.|||+.|+-+.+++.+. . . -+..+.. --.-+.+-||-.++
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~--~----~--~~~~~~~-~~~~~fhdgrl~~~ 240 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTK--C----E--PLPRNKL-LSPVIFHEGRLVQR 240 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCC--C----C--cCCcccC-CCceeeeCCcccCC
Confidence 13556788777643321222368899999999999999999998311 1 0 0111111 01122355777777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 042091 793 NIQKFIQFQLTVNVAALLINVVAAISSGDVP 823 (1023)
Q Consensus 793 ~i~~~i~~~l~~nv~~i~~~~~~~~~~~~~p 823 (1023)
=.-......+.+-=+.+++.++-.+.+...|
T Consensus 241 p~~~~~l~~~~~~p~g~~l~~~r~~~~~~lp 271 (497)
T PLN02177 241 PTPLVALLTFLWMPIGFILSLLRVYLNIPLP 271 (497)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 5555555555544444444444444443333
No 165
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.72 E-value=1.6 Score=45.21 Aligned_cols=113 Identities=22% Similarity=0.261 Sum_probs=73.6
Q ss_pred CCcccHHHHHHHHHhCCC-EEEEECCCCHHHHHHHHHHcCCCCCC---------CCCCCCeeeechhhhccCHHHHHHHH
Q 042091 637 PCRPGVKDAVKLCRDAGV-KVRMVTGDNLQTAKAIALECGILGSD---------AEANDPNIIEGKVFRALSDKEREKVA 706 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~---------~~~~~~~vi~g~~~~~l~~~~~~~~~ 706 (1023)
|.-|+..++|+.+++.|. .++++|--|.--...+-+..|+..-- .+.++.+.+..-. +
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH----~-------- 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH----T-------- 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC----C--------
Confidence 788999999999999997 99999999998888888888875310 0111112211100 0
Q ss_pred hhceEeccCCHh-hHHHHHHHHHhCC-------CEEEEEcCCccCH-HHhhhCCccEEecCCCCHH
Q 042091 707 QEITVMGRSSPN-DKLLLVQALRKGG-------DVVAVTGDGTNDA-PALHEADIGLAMGIQGTEV 763 (1023)
Q Consensus 707 ~~~~v~ar~~P~-~K~~iV~~lq~~g-------~~V~~iGDG~ND~-~aL~~AdvgIamg~~g~~~ 763 (1023)
-+=+.+|-|. =|..++..++..+ +.+.++|||.||. |+++...--+||-..|-+.
T Consensus 152 --~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 152 --QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred --CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0112333222 4777776665432 3789999999995 5777776667776555444
No 166
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=88.63 E-value=4.7 Score=43.76 Aligned_cols=47 Identities=11% Similarity=0.048 Sum_probs=38.9
Q ss_pred eccCCCcccHHHHHHHHHhCCCEEEEECC---CCHHHHHHHHHHcCCCCC
Q 042091 633 GIKDPCRPGVKDAVKLCRDAGVKVRMVTG---DNLQTAKAIALECGILGS 679 (1023)
Q Consensus 633 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~~ 679 (1023)
.-.+.+=|++.++|++|+++|++++++|| ..........+++|+...
T Consensus 13 ~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 13 YKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 34456667999999999999999999996 778888888888998654
No 167
>PLN02645 phosphoglycolate phosphatase
Probab=88.04 E-value=1.5 Score=49.45 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=38.8
Q ss_pred eeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHH---HHcCCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIA---LECGIL 677 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~ 677 (1023)
|.+--.+.+=|++.++|+.|+++|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 333444566799999999999999999999999988777777 557774
No 168
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=87.72 E-value=1.5 Score=45.13 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=63.1
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCH
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSP 717 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P 717 (1023)
+-|+ .+.++.|++. +++.++||.....+..+-+..|+.... ..++.+++.. ..+-.|
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~p 145 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF-----DAVVAADDVQ----------------HHKPAP 145 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc-----eEEEehhhcc----------------CCCCCh
Confidence 3454 6899999875 899999999999999999999986421 2344433321 112223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 718 NDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 718 ~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
+-=....+.++-....+.++||..+|+.+=+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 146 DTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 3333333444333456889999999999999998753
No 169
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.84 E-value=2 Score=44.67 Aligned_cols=93 Identities=16% Similarity=0.081 Sum_probs=55.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++.|++.+ +.+++|.-+.......-+.+|+...... ....++.+.. ..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~-~f~~i~~~~~---------------------~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG-AFSEVLMCGH---------------------DE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC-cccEEEEecc---------------------Cc
Confidence 47899999999999985 5666676554444445556666421110 0012222221 11
Q ss_pred HhhHHHHHH-HHHhCC-CEEEEEcCCccCHHHhhhC--CccE
Q 042091 717 PNDKLLLVQ-ALRKGG-DVVAVTGDGTNDAPALHEA--DIGL 754 (1023)
Q Consensus 717 P~~K~~iV~-~lq~~g-~~V~~iGDG~ND~~aL~~A--dvgI 754 (1023)
| |.+++. .+++.| +.++++||..+|..+-++| ++-.
T Consensus 131 ~--kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 131 S--KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred c--cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 2 223332 333333 4588999999999999999 8854
No 170
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=86.07 E-value=2.2 Score=43.80 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=64.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.+++.++++.|+ .++.++|.-+...+..+.+.+|+.... ..++.+++...- ...+.-.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~------------~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----DGIFCFDTANPD------------YLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----CeEEEeecccCc------------cCCCCCC
Confidence 47789999999998 478999999999999999999986421 123333222100 0001222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGL 754 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgI 754 (1023)
|+-=..+++.+....+.++|+||...|..+=+.|++..
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 33223444444444567899999999999888887653
No 171
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=85.76 E-value=5.6 Score=39.68 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=69.6
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHH---c-----CCCCCCCCCCCCeeeechhh-hccCHHHHHHH
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALE---C-----GILGSDAEANDPNIIEGKVF-RALSDKEREKV 705 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~---~-----gi~~~~~~~~~~~vi~g~~~-~~l~~~~~~~~ 705 (1023)
+|..++++.+..+.+++.|++++.+|++..--+...-.- . ++.. +.+......+ ..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------ 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc------
Confidence 479999999999999999999999999997655443322 2 3322 2222221111 11111
Q ss_pred HhhceEeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCcc
Q 042091 706 AQEITVMGRSSPNDKLLLVQALRKG-----GDVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 706 ~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~ND~~aL~~Advg 753 (1023)
.+..+-.-+.|...++.++.. ...++..|...+|+.+-++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 234455567898888888864 44678889999999998887664
No 172
>PLN02151 trehalose-phosphatase
Probab=84.48 E-value=8.3 Score=43.84 Aligned_cols=63 Identities=17% Similarity=0.217 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHhC-C------CEEEEEcCCccCHHHhhhC-----CccEEecCCCCHHHHhccCccccCCChhHHHHHHH
Q 042091 718 NDKLLLVQALRKG-G------DVVAVTGDGTNDAPALHEA-----DIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVR 785 (1023)
Q Consensus 718 ~~K~~iV~~lq~~-g------~~V~~iGDG~ND~~aL~~A-----dvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~ 785 (1023)
-+|...|+.+.+. + ..++++||-..|-.|++.. ++||-+| .+.. ...|++.+. +-..+..+++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 3899998888764 2 2489999999999998753 6777776 3221 235788887 5566666653
No 173
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=80.81 E-value=6.6 Score=40.20 Aligned_cols=98 Identities=28% Similarity=0.298 Sum_probs=62.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHh-----hceE
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQ-----EITV 711 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~-----~~~v 711 (1023)
.+.+++.+++..++++|++++|+|- +-||... -.++..+..++..-...+.. ....
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg--------yf~~~~f~~~~~~m~~~l~~~gv~id~i~ 91 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG--------YFTEADFDKLHNKMLKILASQGVKIDGIL 91 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc--------CccHHHHHHHHHHHHHHHHHcCCccceEE
Confidence 3678999999999999999999985 4455432 12233333332211111111 1124
Q ss_pred eccCCHhh--------HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 042091 712 MGRSSPND--------KLLLVQALRKGG---DVVAVTGDGTNDAPALHEADIG 753 (1023)
Q Consensus 712 ~ar~~P~~--------K~~iV~~lq~~g---~~V~~iGDG~ND~~aL~~Advg 753 (1023)
+|.-.|++ ...+.+.+++.+ ....||||...|..+-..|++.
T Consensus 92 ~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 92 YCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 55555553 455666666664 6789999999999988888776
No 174
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=80.03 E-value=4.8 Score=42.84 Aligned_cols=99 Identities=17% Similarity=0.240 Sum_probs=74.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRS 715 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~ 715 (1023)
.++.||+.+.++.|++.|+.+.+.|+-....+..+.+..|+.... ..++++.+... ..-
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f-----~~~v~~~dv~~----------------~KP 143 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF-----DVIVTADDVAR----------------GKP 143 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc-----chhccHHHHhc----------------CCC
Confidence 379999999999999999999999999999999999999998642 23444444321 123
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 042091 716 SPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLA 755 (1023)
Q Consensus 716 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIa 755 (1023)
.|+-=+.-.+.|.-....+.++.|..|.+.|-++|+.-+-
T Consensus 144 ~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 144 APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 4444444455554456678999999999999999987653
No 175
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=78.29 E-value=11 Score=41.06 Aligned_cols=88 Identities=18% Similarity=0.198 Sum_probs=53.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHH----HHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhce
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQ----TAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEIT 710 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~----ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~ 710 (1023)
+.|.=|++.+..+.+++.|++|+++||+... |..++ ++.|.... ..+++.+..=.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-----~~LiLR~~~D~--------------- 201 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-----EKLILKDPQDN--------------- 201 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-----ceeeecCCCCC---------------
Confidence 4477789999999999999999999999864 33333 23566531 11222211000
Q ss_pred EeccCCHhhHHHHHHHHHhCCC-EEEEEcCCccCH
Q 042091 711 VMGRSSPNDKLLLVQALRKGGD-VVAVTGDGTNDA 744 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~~g~-~V~~iGDG~ND~ 744 (1023)
-.....+-|...-+.+.+.|+ +++.+||-.+|.
T Consensus 202 -~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 202 -SAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred -ccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 000112345455555556665 567899999887
No 176
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=77.85 E-value=2.3 Score=45.56 Aligned_cols=90 Identities=24% Similarity=0.292 Sum_probs=56.9
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQT---AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
++.=|++.+.++.+++.|++|+.+||++... +..=-++.|.... ..+++.+..-..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-----~~l~lr~~~~~~---------------- 172 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-----DHLILRPDKDPS---------------- 172 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-----SCGEEEEESSTS----------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-----chhccccccccc----------------
Confidence 4666889999999999999999999987652 2222345565431 123332221100
Q ss_pred ccCCHhhHHHHHHHHHhCCC-EEEEEcCCccCHHH
Q 042091 713 GRSSPNDKLLLVQALRKGGD-VVAVTGDGTNDAPA 746 (1023)
Q Consensus 713 ar~~P~~K~~iV~~lq~~g~-~V~~iGDG~ND~~a 746 (1023)
.....+-|..--+.++++|+ +++.+||-.+|...
T Consensus 173 ~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 173 KKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp S------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 01123458888888888864 66789999999875
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=77.75 E-value=6.8 Score=37.70 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=29.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHH
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAK 668 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~ 668 (1023)
+++.+++.++++.++++|+.++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678999999999999999999999999876543
No 178
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=73.16 E-value=7.6 Score=38.89 Aligned_cols=87 Identities=22% Similarity=0.292 Sum_probs=58.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCHH----HHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEec
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNLQ----TAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMG 713 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~~----ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~a 713 (1023)
+++=+++.|..-++.|=.++.+||+.+. +++.+|+...|... .+++..|.. .
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m-----~pv~f~Gdk-------------------~ 170 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM-----NPVIFAGDK-------------------P 170 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC-----cceeeccCC-------------------C
Confidence 5666788899999999999999999875 45666666666432 123332221 1
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 042091 714 RSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADI 752 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~Adv 752 (1023)
|...-+| ...+|+++ .-..-||+-||..|-|+|++
T Consensus 171 k~~qy~K---t~~i~~~~-~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 171 KPGQYTK---TQWIQDKN-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred Ccccccc---cHHHHhcC-ceEEecCCchhhhHHHhcCc
Confidence 1112234 34566665 34567999999999999975
No 179
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=72.48 E-value=7.6 Score=41.79 Aligned_cols=92 Identities=17% Similarity=0.107 Sum_probs=56.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++-||+.++++.|++. +++.++|.-+.. .+..|+.... ..++...+. .+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f-----d~i~~~~~~------------------~~~K 163 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF-----EFVLRAGPH------------------GRSK 163 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh-----ceeEecccC------------------CcCC
Confidence 5678999999999975 899999886654 1456664321 122222211 1122
Q ss_pred Hh--hHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCccEEec
Q 042091 717 PN--DKLLLVQALRKGGDVVAVTGDG-TNDAPALHEADIGLAMG 757 (1023)
Q Consensus 717 P~--~K~~iV~~lq~~g~~V~~iGDG-~ND~~aL~~AdvgIamg 757 (1023)
|. -=....+.+.-..+.++||||. ..|+.+=+.|++-....
T Consensus 164 P~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 164 PFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred CcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 32 1122223333234679999999 59999999998765543
No 180
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=72.37 E-value=2.2 Score=43.07 Aligned_cols=42 Identities=12% Similarity=-0.066 Sum_probs=38.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCC
Q 042091 635 KDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGIL 677 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 677 (1023)
.=..||++.+.++.|.+. +.+++.|......|..+...++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 336899999999999988 999999999999999999998875
No 181
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=72.12 E-value=6.2 Score=43.42 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=38.6
Q ss_pred Cc-ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 638 CR-PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 638 lr-~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
+| |++.+++++|+++|+++.++|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999999999999999999985
No 182
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=71.49 E-value=18 Score=40.03 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=34.2
Q ss_pred eccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHH---HHHHcCCC
Q 042091 633 GIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKA---IALECGIL 677 (1023)
Q Consensus 633 ~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~---ia~~~gi~ 677 (1023)
.-.+.+=|++.++|+.|+++|++++++|+....+... --+++|+.
T Consensus 14 ~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 14 WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3356677889999999999999999999976544433 23557775
No 183
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=71.13 E-value=16 Score=39.87 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=79.7
Q ss_pred EeeeeccCCCcccHHHHHHHHHhC-CCEEEEECCCCHHHHHHHHHHcCC--CCCCCCCCCCeeeechhhhccCHHH----
Q 042091 629 LAIVGIKDPCRPGVKDAVKLCRDA-GVKVRMVTGDNLQTAKAIALECGI--LGSDAEANDPNIIEGKVFRALSDKE---- 701 (1023)
Q Consensus 629 lG~i~~~D~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi--~~~~~~~~~~~vi~g~~~~~l~~~~---- 701 (1023)
+..--...++-++..+.+++|... ...++++||.+.........-.|| ...... ....+.|+......+++
T Consensus 32 i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa--~~r~~~g~~~~~~~~~~~~~~ 109 (266)
T COG1877 32 IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGA--EVRDPNGKWWINLAEEADLRW 109 (266)
T ss_pred cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecce--EEecCCCCeeEecCHHHHhhH
Confidence 333444567888899999999988 457999999999998887763333 211110 00011222222211110
Q ss_pred -------HHHHH------------------------------------------------hhceEeccCCHhhHHHHHHH
Q 042091 702 -------REKVA------------------------------------------------QEITVMGRSSPNDKLLLVQA 726 (1023)
Q Consensus 702 -------~~~~~------------------------------------------------~~~~v~ar~~P~~K~~iV~~ 726 (1023)
++..+ .+..|-+|.+-..|...++.
T Consensus 110 ~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~ 189 (266)
T COG1877 110 LKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKY 189 (266)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHH
Confidence 00000 01134456666679999986
Q ss_pred HHhC----CCEEEEEcCCccCHHHhhhCC----ccEEecCCCCHHHH
Q 042091 727 LRKG----GDVVAVTGDGTNDAPALHEAD----IGLAMGIQGTEVAK 765 (1023)
Q Consensus 727 lq~~----g~~V~~iGDG~ND~~aL~~Ad----vgIamg~~g~~~ak 765 (1023)
+.+. |..+.+.||-.-|-.|++..+ ++|-+| .+...|+
T Consensus 190 i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~-~~~t~a~ 235 (266)
T COG1877 190 IMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG-VGSTQAK 235 (266)
T ss_pred HHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec-CCccccc
Confidence 5544 446899999999999999887 455556 4433333
No 184
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=69.64 E-value=12 Score=41.58 Aligned_cols=64 Identities=19% Similarity=0.269 Sum_probs=42.8
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCC-ccCHH---HhhhCCccEEecCCCC---HHHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDG-TNDAP---ALHEADIGLAMGIQGT---EVAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG-~ND~~---aL~~AdvgIamg~~g~---~~ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...- .|+.|+++|-| .-=.| +|..++.-+.+-.+.+ ..+...||+++.
T Consensus 136 ~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 136 DVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred CCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 34667888877777776643 39999999997 44444 4667777766542222 224567899886
No 185
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=69.12 E-value=15 Score=39.42 Aligned_cols=60 Identities=22% Similarity=0.245 Sum_probs=30.3
Q ss_pred cCCHhhHHHHHHHHHhC-C------CEEEEEcCCccCHHHhhhC------CccEEecCCCC-HHHHhccCccccC
Q 042091 714 RSSPNDKLLLVQALRKG-G------DVVAVTGDGTNDAPALHEA------DIGLAMGIQGT-EVAKENSDIIILD 774 (1023)
Q Consensus 714 r~~P~~K~~iV~~lq~~-g------~~V~~iGDG~ND~~aL~~A------dvgIamg~~g~-~~ak~~adiil~~ 774 (1023)
|..-..|...|+.+-+. + ..++++||...|-.|++.. +++|.++ ... ..-..+|++-+.+
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 44444699999887765 3 3699999999999998763 6788887 443 2234556666654
No 186
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=67.99 E-value=8.8 Score=42.32 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=37.6
Q ss_pred Cc-ccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 638 CR-PGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 638 lr-~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
+| |++.+++++|+++|+++.++|+.+...+..+.+++|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 56 899999999999999999999888888899999999974
No 187
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=67.14 E-value=3.2e+02 Score=36.48 Aligned_cols=75 Identities=19% Similarity=0.345 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe---eCC
Q 042091 179 IAFAVFLVIVVT-AISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT---GHS 254 (1023)
Q Consensus 179 i~~~lll~~~v~-~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~---g~~ 254 (1023)
-.++++++.++. .+.-+++.++.++|+++ . .......| ++-|....+...|.+|-|.++++ |..
T Consensus 195 ~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~---~-----~~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~ 262 (1054)
T TIGR01657 195 YSLCIVFMSSTSISLSVYQIRKQMQRLRDM---V-----HKPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKT 262 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---h-----cCCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCE
Confidence 344444444444 44555555566655432 1 11222222 34588999999999999999997 444
Q ss_pred eEEeeccccCC
Q 042091 255 LAIDESSMTGE 265 (1023)
Q Consensus 255 l~VDES~LTGE 265 (1023)
+-.|=-.+.|+
T Consensus 263 iPaD~~ll~g~ 273 (1054)
T TIGR01657 263 MPCDSVLLSGS 273 (1054)
T ss_pred ecceEEEEeCc
Confidence 55666667774
No 188
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=66.51 E-value=6.3 Score=39.87 Aligned_cols=85 Identities=14% Similarity=0.099 Sum_probs=54.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++.||+.++++ ++.++|.-+........+.+|+.... ..++++++.. ...-.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~----------------~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF-----DRAFSVDTVR----------------AYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH-----hhhccHhhcC----------------CCCCC
Confidence 58899999998 37789998888888888899986421 1223333211 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhh
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPALHE 749 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~ 749 (1023)
|+-=..+.+.+.-..+.++||||+..|+.+-++
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 222234444444445679999999999877554
No 189
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.76 E-value=24 Score=38.91 Aligned_cols=64 Identities=17% Similarity=0.287 Sum_probs=42.3
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcC-CccCHH---HhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGD-GTNDAP---ALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGD-G~ND~~---aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...- .|+.|+++|- |.-=.| +|.+++.-+.+-.+.+. .....||+++.
T Consensus 135 ~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 135 PVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 34677888887777766543 3899999999 555555 46666666655323232 24577999885
No 190
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.26 E-value=28 Score=36.65 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=70.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++-+++.++++.+++. +++.++|--....+....+++|+...-. .++++++. ....
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd----~v~~s~~~-------------------g~~K 154 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD----AVFISEDV-------------------GVAK 154 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh----eEEEeccc-------------------ccCC
Confidence 6778999999999999 9999999988888899999999764321 22222221 2233
Q ss_pred HhhHHHHHHHHHhC---CCEEEEEcCC-ccCHHHhhhCCcc-EEecCCCCHH--HHhccCccccCCChhHHHHHH
Q 042091 717 PNDKLLLVQALRKG---GDVVAVTGDG-TNDAPALHEADIG-LAMGIQGTEV--AKENSDIIILDDNFASVVKVV 784 (1023)
Q Consensus 717 P~~K~~iV~~lq~~---g~~V~~iGDG-~ND~~aL~~Advg-Iamg~~g~~~--ak~~adiil~~~~~~~i~~~i 784 (1023)
|..+ -.-..+++. .+.++||||. .||+..-++++.- +-+...+... .....|+.+. ++..+..++
T Consensus 155 P~~~-~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~--~l~~l~~~~ 226 (229)
T COG1011 155 PDPE-IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEIS--SLAELLDLL 226 (229)
T ss_pred CCcH-HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEc--CHHHHHHHH
Confidence 4322 222333333 4579999997 6673444555442 3333112111 1134555554 455555544
No 191
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=63.26 E-value=19 Score=39.44 Aligned_cols=47 Identities=21% Similarity=0.307 Sum_probs=40.3
Q ss_pred EEeeeeccCCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc
Q 042091 628 LLAIVGIKDPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC 674 (1023)
Q Consensus 628 ~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~ 674 (1023)
+=|.+.-...+=|++.++|+.|+++|++++.+|-....+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34667778889999999999999999999999999888888666664
No 192
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.79 E-value=20 Score=39.92 Aligned_cols=64 Identities=17% Similarity=0.269 Sum_probs=40.9
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEc-CCccCHH---HhhhCCccEEecCC---CCHHHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTG-DGTNDAP---ALHEADIGLAMGIQ---GTEVAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iG-DG~ND~~---aL~~AdvgIamg~~---g~~~ak~~adiil~ 773 (1023)
..|.-|||..=.++++...- .|+.|+++| -+.-=.| +|..++..+.+-.+ ..+.+...||+++.
T Consensus 135 ~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 135 TALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 34667888877777776542 499999999 4444444 46667777765521 12334567898875
No 193
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.46 E-value=26 Score=38.99 Aligned_cols=63 Identities=14% Similarity=0.190 Sum_probs=39.9
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc---CHH-Hhh------hCCccEEecCCCC--HHHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN---DAP-ALH------EADIGLAMGIQGT--EVAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N---D~~-aL~------~AdvgIamg~~g~--~~ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...- .|+.|+++|.+.. -.. ||. .|.|-++-. ... ...-..||+++.
T Consensus 136 ~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~ 212 (295)
T PRK14174 136 KCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIA 212 (295)
T ss_pred CCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 34667888877777766643 3899999999854 222 333 355555544 222 225578999886
No 194
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=56.42 E-value=1.6e+02 Score=37.57 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCC-eEE
Q 042091 180 AFAVFLVIVVTAISDYRQSLQ-FQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS-LAI 257 (1023)
Q Consensus 180 ~~~lll~~~v~~~~~~~~~~~-~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~-l~V 257 (1023)
.+++++++++++.-++.++++ -+.+.+..+ .. . ... .-++-|....+...|.+|-|.++++... +-+
T Consensus 58 ~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~-~~-----~-~~~----~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 126 (755)
T TIGR01647 58 FVIILGLLLLNATIGFIEENKAGNAVEALKQ-SL-----A-PKA----RVLRDGKWQEIPASELVPGDVVRLKIGDIVPA 126 (755)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh-hC-----C-CeE----EEEECCEEEEEEhhhCcCCCEEEECCCCEEec
Confidence 344445556666666666644 455554432 11 1 111 1224478889999999999999998543 455
Q ss_pred eeccccCCCceeccCC--C--CCe-eeccceEeeccee
Q 042091 258 DESSMTGESKIVRKDH--K--TPF-LMSGCKVADGVGT 290 (1023)
Q Consensus 258 DES~LTGES~pv~K~~--~--~~~-l~aGt~v~~G~~~ 290 (1023)
|=-.+.|+..-+.-.. | .|+ ...|..+..|+..
T Consensus 127 Dg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v 164 (755)
T TIGR01647 127 DCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTV 164 (755)
T ss_pred eEEEEecCceEEEcccccCCccceEeccCCeeeccCEE
Confidence 6666666643333221 2 221 2356777777643
No 195
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.85 E-value=36 Score=37.54 Aligned_cols=138 Identities=14% Similarity=0.164 Sum_probs=75.6
Q ss_pred CCCcccHHHHHHHHHhCCCE---EEEECCCCHHHH------HHHHHHcCCCCCCCC---------------------CCC
Q 042091 636 DPCRPGVKDAVKLCRDAGVK---VRMVTGDNLQTA------KAIALECGILGSDAE---------------------AND 685 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~---v~mlTGD~~~ta------~~ia~~~gi~~~~~~---------------------~~~ 685 (1023)
++++++.++.++.+++.|++ ..++-||++... ...|+++||...... .-+
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~ 90 (282)
T PRK14169 11 KKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVD 90 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCC
Confidence 45677777778888777765 355667776654 344666777642210 001
Q ss_pred Ceeeech------------------hhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc---
Q 042091 686 PNIIEGK------------------VFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN--- 742 (1023)
Q Consensus 686 ~~vi~g~------------------~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N--- 742 (1023)
.+++--+ +.+-++...+.+++..-.-|.-|||..=.++++...- .|+.|+++|.+..
T Consensus 91 GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGk 170 (282)
T PRK14169 91 AILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGR 170 (282)
T ss_pred EEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchH
Confidence 1221111 1111222233333333334667888887777777653 4899999999844
Q ss_pred -CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 743 -DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 743 -D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
=+.+|...|.-+.+.-+-|. ..-..||+++.
T Consensus 171 Pla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 171 PLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 12255555555544423332 24467898875
No 196
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=52.67 E-value=39 Score=40.84 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=32.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEECCCCH------------HHHHHHHHHcCCC
Q 042091 638 CRPGVKDAVKLCRDAGVKVRMVTGDNL------------QTAKAIALECGIL 677 (1023)
Q Consensus 638 lr~~~~~~I~~l~~aGi~v~mlTGD~~------------~ta~~ia~~~gi~ 677 (1023)
+-|++.++++.|+++|++++++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997444 3466777777774
No 197
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.39 E-value=36 Score=37.61 Aligned_cols=71 Identities=14% Similarity=0.227 Sum_probs=42.9
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc-C---HHHhhh------CCccEEecCCCCH--HHHhc
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN-D---APALHE------ADIGLAMGIQGTE--VAKEN 767 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N-D---~~aL~~------AdvgIamg~~g~~--~ak~~ 767 (1023)
+.++...-.-|.-|||..=.++++..+- .|+.|.++|.+.. = +-+|.. |.|-++-. ...+ ..-..
T Consensus 126 ~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ 204 (286)
T PRK14184 126 MGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECRE 204 (286)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHh
Confidence 3333333344677888877777777653 3899999998844 1 224544 55555543 2222 24578
Q ss_pred cCcccc
Q 042091 768 SDIIIL 773 (1023)
Q Consensus 768 adiil~ 773 (1023)
||+++.
T Consensus 205 ADIVI~ 210 (286)
T PRK14184 205 ADFLFV 210 (286)
T ss_pred CCEEEE
Confidence 888875
No 198
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.30 E-value=43 Score=36.82 Aligned_cols=64 Identities=20% Similarity=0.315 Sum_probs=41.8
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH-H--HHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE-V--AKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~-~--ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...- .|+.|+++|.+.. =+.+|.+.|.-+.+.-+-|. . .-..||+++.
T Consensus 135 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIs 207 (278)
T PRK14172 135 KCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVV 207 (278)
T ss_pred CCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 34677888888888877653 4899999999854 12256656655555433332 2 3467899875
No 199
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.28 E-value=45 Score=36.83 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=43.2
Q ss_pred HHHHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH---HHHhccCc
Q 042091 700 KEREKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE---VAKENSDI 770 (1023)
Q Consensus 700 ~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~---~ak~~adi 770 (1023)
..+.+++..-..|.-|||..=.++++.++- .|+.|+++|-+.- =+.+|...|.-+.+.-+.|. ..-..||+
T Consensus 125 ~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADI 204 (284)
T PRK14190 125 INVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADI 204 (284)
T ss_pred hhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCE
Confidence 333444443345677888888877777653 4899999998743 12244444443333323332 24577888
Q ss_pred ccc
Q 042091 771 IIL 773 (1023)
Q Consensus 771 il~ 773 (1023)
++.
T Consensus 205 vI~ 207 (284)
T PRK14190 205 LIV 207 (284)
T ss_pred EEE
Confidence 874
No 200
>PTZ00445 p36-lilke protein; Provisional
Probab=49.09 E-value=18 Score=37.92 Aligned_cols=135 Identities=18% Similarity=0.189 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHhccchhhhhhhccccccCCCCCCCcEEEe--eeeccC----------CCcccHHHHHHHHHhCCCEEEE
Q 042091 591 DFFKAAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLA--IVGIKD----------PCRPGVKDAVKLCRDAGVKVRM 658 (1023)
Q Consensus 591 ~~~~~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG--~i~~~D----------~lr~~~~~~I~~l~~aGi~v~m 658 (1023)
+..+...+.+.+.|.|++++- -|.|+++ .=|--+ .++|+.++.+++|+++||+|.+
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D------------~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~V 96 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASD------------FDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISV 96 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEec------------chhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEE
Confidence 556667778888999988876 3444444 011222 3799999999999999999999
Q ss_pred ECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCH--HHHHHHHhhceEec------------------cCCHh
Q 042091 659 VTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSD--KEREKVAQEITVMG------------------RSSPN 718 (1023)
Q Consensus 659 lTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~--~~~~~~~~~~~v~a------------------r~~P~ 718 (1023)
+|=-...+ +.. ...+..|.|.++....- ...+..+. .|+| .-.|+
T Consensus 97 VTfSd~~~---------~~~----~~~~~~Isg~~li~~~lk~s~~~~~i~--~~~~yyp~~w~~p~~y~~~gl~KPdp~ 161 (219)
T PTZ00445 97 VTFSDKEL---------IPS----ENRPRYISGDRMVEAALKKSKCDFKIK--KVYAYYPKFWQEPSDYRPLGLDAPMPL 161 (219)
T ss_pred EEccchhh---------ccc----cCCcceechHHHHHHHHHhcCccceee--eeeeeCCcccCChhhhhhhcccCCCcc
Confidence 99655544 211 12345666666533110 00000001 1221 12344
Q ss_pred hHHHHHHH-HHhC---CCEEEEEcCCccCHHHhhhCCc
Q 042091 719 DKLLLVQA-LRKG---GDVVAVTGDGTNDAPALHEADI 752 (1023)
Q Consensus 719 ~K~~iV~~-lq~~---g~~V~~iGDG~ND~~aL~~Adv 752 (1023)
.|.-=.+. +++. -+.++++=|....+.+-++.++
T Consensus 162 iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 162 DKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred chHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 54332222 2332 4568999999888888776543
No 201
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.74 E-value=54 Score=36.16 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=36.7
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 712 MGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 712 ~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
|.-|||..=.++++..+- .|+.|+++|.|.. =+.||...|.-+.+--+.|. ..-..||+++.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~ 206 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVA 206 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 566777777777766642 3899999999844 12255444443333323332 23357888875
No 202
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=46.44 E-value=71 Score=36.07 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=37.8
Q ss_pred eeeeccCCCcccHHHHHHHHHhC----CCEEEEECCCC---HHH-HHHHHHHcCCC
Q 042091 630 AIVGIKDPCRPGVKDAVKLCRDA----GVKVRMVTGDN---LQT-AKAIALECGIL 677 (1023)
Q Consensus 630 G~i~~~D~lr~~~~~~I~~l~~a----Gi~v~mlTGD~---~~t-a~~ia~~~gi~ 677 (1023)
|++.-.+++-+++.++++.|++. |+++..+|-.. ..+ +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 55666788899999999999999 99999999655 333 55566778875
No 203
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=46.40 E-value=68 Score=36.53 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=34.8
Q ss_pred cccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHc-C
Q 042091 639 RPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALEC-G 675 (1023)
Q Consensus 639 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~-g 675 (1023)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999999996 6
No 204
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=45.28 E-value=38 Score=36.44 Aligned_cols=133 Identities=18% Similarity=0.321 Sum_probs=69.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCC--------CCCCee--eechhhhccCHHHHHHHH
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAE--------ANDPNI--IEGKVFRALSDKEREKVA 706 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~--------~~~~~v--i~g~~~~~l~~~~~~~~~ 706 (1023)
.+|+++.+.++.|++.+|.+.++|+--......+-++-|...++.. .....+ ..|+-+-.+...+-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~---- 165 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNES---- 165 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHH----
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcc----
Confidence 6899999999999999999999999888888888888887665431 011111 12222211111110
Q ss_pred hhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC---CccEEecC-CCC-H----HHHhccCccccCCCh
Q 042091 707 QEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEA---DIGLAMGI-QGT-E----VAKENSDIIILDDNF 777 (1023)
Q Consensus 707 ~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~A---dvgIamg~-~g~-~----~ak~~adiil~~~~~ 777 (1023)
+. +.+| .-+.++. ...|+..||..-|+.|-.-. +.-+.+|= +.. + .-+++-|||+.+|.=
T Consensus 166 ----~l-~~~~-----~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 166 ----AL-EDSP-----YFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp ----HH-TTHH-----HHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred ----cc-cCch-----HHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 00 0011 1122222 45799999999999996555 32233220 111 2 345788999998864
Q ss_pred hHHHHHH
Q 042091 778 ASVVKVV 784 (1023)
Q Consensus 778 ~~i~~~i 784 (1023)
-.++..|
T Consensus 235 m~v~~~i 241 (246)
T PF05822_consen 235 MDVPNAI 241 (246)
T ss_dssp -HHHHHH
T ss_pred chHHHHH
Confidence 4444443
No 205
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.98 E-value=58 Score=35.95 Aligned_cols=63 Identities=19% Similarity=0.210 Sum_probs=40.4
Q ss_pred EeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 711 VMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
-|.-|||..=.++++...- .|+.|+++|-|.. =+.+|...|.-+.+.-+.|. ..-..||+++.
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIs 206 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIV 206 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4567888877777776643 4899999999854 12255555555554423332 23477898875
No 206
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=43.91 E-value=3.9e+02 Score=27.93 Aligned_cols=15 Identities=27% Similarity=0.421 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHH
Q 042091 980 LASIGIGLFSWPLAV 994 (1023)
Q Consensus 980 ~~~~~~~~~~~~~~~ 994 (1023)
++.+++|++.++..+
T Consensus 181 ~~~iiig~i~~~~~~ 195 (206)
T PF06570_consen 181 WVYIIIGVIAFALRF 195 (206)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344466666665543
No 207
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.07 E-value=34 Score=37.73 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=74.3
Q ss_pred CCCcccHHHHHHHHHhCCCE---EEEECCCCHHHH------HHHHHHcCCCCCCCC---------------------CCC
Q 042091 636 DPCRPGVKDAVKLCRDAGVK---VRMVTGDNLQTA------KAIALECGILGSDAE---------------------AND 685 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~---v~mlTGD~~~ta------~~ia~~~gi~~~~~~---------------------~~~ 685 (1023)
..++++.++.++.+++.|++ ..+..||++... ...|+++||...... .-+
T Consensus 12 ~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~ 91 (284)
T PRK14170 12 KEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIH 91 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCC
Confidence 45677788888888877765 456678777654 345667787642210 011
Q ss_pred Ceeeech------------------hhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc---
Q 042091 686 PNIIEGK------------------VFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN--- 742 (1023)
Q Consensus 686 ~~vi~g~------------------~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N--- 742 (1023)
.+++--+ +.+.+++..+.+++..-.-|.-|||..=.++++...- .|+.|+++|-|..
T Consensus 92 GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGk 171 (284)
T PRK14170 92 GILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGK 171 (284)
T ss_pred eEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchH
Confidence 1221111 1111222222333322234667888777777766543 3899999999844
Q ss_pred -CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 743 -DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 743 -D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
=+.+|...|.-+.+--+.|. ..-..||+++.
T Consensus 172 Pla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 206 (284)
T PRK14170 172 PVAQLLLNENATVTIAHSRTKDLPQVAKEADILVV 206 (284)
T ss_pred HHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 12245444444433323332 23467888875
No 208
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.16 E-value=2.8e+02 Score=30.71 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=76.1
Q ss_pred EeeeeccCCCccc--HHHHHHHHHhCCCEEEEECCCC---HHHHHHHHHHcCCCCCCCCCCCCeeee-------------
Q 042091 629 LAIVGIKDPCRPG--VKDAVKLCRDAGVKVRMVTGDN---LQTAKAIALECGILGSDAEANDPNIIE------------- 690 (1023)
Q Consensus 629 lG~i~~~D~lr~~--~~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~~~vi~------------- 690 (1023)
++++...|.+-.. ++.-++.|++.|+.+.++-=+. .+.....=++++-+... +.+++-
T Consensus 35 Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V----~GIlvq~Plp~~i~~~~i~ 110 (285)
T PRK14189 35 LAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKI----HGILVQLPLPKHIDSHKVI 110 (285)
T ss_pred EEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCC----CeEEEeCCCCCCCCHHHHH
Confidence 4455555555443 3566888999999876654332 23333334444333211 112221
Q ss_pred -----chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc-C---HHHhhhCCccEEecCC
Q 042091 691 -----GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN-D---APALHEADIGLAMGIQ 759 (1023)
Q Consensus 691 -----g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N-D---~~aL~~AdvgIamg~~ 759 (1023)
-++.+.++...+.+++..-..|.-|||..=.++++..+- .|..|+++|-|.. = +.+|...+.-+.+.-+
T Consensus 111 ~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs 190 (285)
T PRK14189 111 EAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS 190 (285)
T ss_pred hhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC
Confidence 122222333444444433345677888877777776643 3899999999855 2 2255555555544323
Q ss_pred CC-H--HHHhccCcccc
Q 042091 760 GT-E--VAKENSDIIIL 773 (1023)
Q Consensus 760 g~-~--~ak~~adiil~ 773 (1023)
.+ + ..-..||+++.
T Consensus 191 ~t~~l~~~~~~ADIVV~ 207 (285)
T PRK14189 191 KTRDLAAHTRQADIVVA 207 (285)
T ss_pred CCCCHHHHhhhCCEEEE
Confidence 32 2 24578898876
No 209
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=41.09 E-value=1.8e+02 Score=27.92 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCEEEEEcCCcc--CHHHhhhCCccEEec
Q 042091 722 LLVQALRKGGDVVAVTGDGTN--DAPALHEADIGLAMG 757 (1023)
Q Consensus 722 ~iV~~lq~~g~~V~~iGDG~N--D~~aL~~AdvgIamg 757 (1023)
++++.+ .+-+.+...|-|.| |..++++-+|-++-.
T Consensus 53 ~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 53 EVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 445555 34567888999988 888999999888754
No 210
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.87 E-value=65 Score=35.48 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=44.5
Q ss_pred HHHHHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCC-ccCHH---HhhhCCccEEecCCCCH---HHHhccC
Q 042091 699 DKEREKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDG-TNDAP---ALHEADIGLAMGIQGTE---VAKENSD 769 (1023)
Q Consensus 699 ~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG-~ND~~---aL~~AdvgIamg~~g~~---~ak~~ad 769 (1023)
...+.+++..-.-|.-|||..=.++++...- .|..|.++|-| .-=-| +|...+--+...-+.+. ..-..||
T Consensus 118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~AD 197 (279)
T PRK14178 118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQAD 197 (279)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCC
Confidence 3333444433345677888887777777653 38999999998 33444 55544444433322232 2446788
Q ss_pred cccc
Q 042091 770 IIIL 773 (1023)
Q Consensus 770 iil~ 773 (1023)
+++.
T Consensus 198 IvI~ 201 (279)
T PRK14178 198 ILVS 201 (279)
T ss_pred EEEE
Confidence 8876
No 211
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=40.25 E-value=4.7e+02 Score=34.61 Aligned_cols=20 Identities=30% Similarity=0.293 Sum_probs=11.4
Q ss_pred ccEEEecCCCccCccEEEEe
Q 042091 232 GEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 232 GDIV~l~~Gd~VPaDgill~ 251 (1023)
|-...+...|.+|-|.++++
T Consensus 149 g~~~~I~~~~lv~GDiv~l~ 168 (997)
T TIGR01106 149 GEKMSINAEQVVVGDLVEVK 168 (997)
T ss_pred CEEEEeeHHHCCCCCEEEEC
Confidence 44555555555555655555
No 212
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=39.73 E-value=93 Score=35.28 Aligned_cols=63 Identities=19% Similarity=0.171 Sum_probs=38.9
Q ss_pred EeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCC---HHHHhccCcccc
Q 042091 711 VMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGT---EVAKENSDIIIL 773 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~---~~ak~~adiil~ 773 (1023)
-|.-|||..=.++++...- .|+.|.++|-+.. =+.+|...|.-+.+--+-| +..-..||+++.
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIs 263 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIA 263 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEE
Confidence 4667888877777766543 3899999998843 1225555555544432222 224467888875
No 213
>COG3329 Predicted permease [General function prediction only]
Probab=39.10 E-value=1.4e+02 Score=32.91 Aligned_cols=62 Identities=21% Similarity=0.333 Sum_probs=39.2
Q ss_pred HHHHHHhhcCCCcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchh
Q 042091 115 DLSNRRNSFGSNTYPLKKGRSFLNFLWEAWQDLTLIILIVAAIASLALGIKTEGVEEGWYDG 176 (1023)
Q Consensus 115 ~~~~r~~~~G~N~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ails~~~~~~~~~~~~~~~~~ 176 (1023)
|....|+.|-+-...+...-..|+.+.|.|.++....++...++.++.|-..+..-+.+|++
T Consensus 186 d~~ssr~~~~~~~~~ed~~v~~~ell~Esflnpal~lllggl~iGlitGe~g~~vl~~F~~~ 247 (372)
T COG3329 186 DLASSRQEYLSPQWGEDNRVKIWELLQESFLNPALVLLLGGLAIGLITGEQGESVLKPFFDP 247 (372)
T ss_pred hhhhhhhhhcccccCcccchhhHHHHHHHHcCchHHHHHHHHHHhheeccCchhhhhhhhHH
Confidence 55555666655444444445678999999999998888877666666553322222355554
No 214
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.85 E-value=42 Score=37.30 Aligned_cols=62 Identities=21% Similarity=0.263 Sum_probs=39.1
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc---C-HHHhhh------CCccEEecCCCCH---HHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN---D-APALHE------ADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N---D-~~aL~~------AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
.-|.-|||..=.++++..+- .|+.|+++|-+.. - +-+|.+ |.|-++- +.|. ..-..||+++.
T Consensus 134 ~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvch--s~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 134 ARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCH--SRTDDLAAKTRRADIVVA 210 (297)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeC--CCCCCHHHHHhhCCEEEE
Confidence 34667888887777777653 4899999999844 1 224443 3444443 3332 24578899886
No 215
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=37.93 E-value=34 Score=32.34 Aligned_cols=41 Identities=27% Similarity=0.232 Sum_probs=31.5
Q ss_pred CCcccHHHHHHHHHhCCCE-EEEECCCCHHHHHHHHHHcCCC
Q 042091 637 PCRPGVKDAVKLCRDAGVK-VRMVTGDNLQTAKAIALECGIL 677 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~-v~mlTGD~~~ta~~ia~~~gi~ 677 (1023)
-+.+.+.+.+++|.+.|++ +|+.+|.....+...|++.|+.
T Consensus 63 ~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 63 VPPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 3567789999999999997 9999999999999999998885
No 216
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.12 E-value=48 Score=36.62 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=41.8
Q ss_pred HHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc-C---HHHhhhCCccEEecCCCCH-H--HHhccCccc
Q 042091 702 REKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN-D---APALHEADIGLAMGIQGTE-V--AKENSDIII 772 (1023)
Q Consensus 702 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N-D---~~aL~~AdvgIamg~~g~~-~--ak~~adiil 772 (1023)
+.+++..-.-|.-|||..=.++++..+- .|..|+++|.|.. = +.+|...+.-+.+--+-+. . .-..||+++
T Consensus 126 ~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV 205 (285)
T PRK14191 126 IGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVC 205 (285)
T ss_pred HHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEE
Confidence 3334333344667888888888777654 3899999999822 2 2244444433333212232 2 346788877
Q ss_pred c
Q 042091 773 L 773 (1023)
Q Consensus 773 ~ 773 (1023)
.
T Consensus 206 ~ 206 (285)
T PRK14191 206 V 206 (285)
T ss_pred E
Confidence 5
No 217
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.06 E-value=38 Score=37.44 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=36.4
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCC-HH--HHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGT-EV--AKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~-~~--ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...- .|..|+++|-|.. =+.+|...+.-+.+.-+-+ +. .-..||+++.
T Consensus 135 ~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIs 207 (286)
T PRK14175 135 QTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVS 207 (286)
T ss_pred CCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEE
Confidence 34667888877777776642 4899999999752 1224433333333321222 21 3456777764
No 218
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=34.99 E-value=55 Score=31.13 Aligned_cols=79 Identities=10% Similarity=0.138 Sum_probs=51.6
Q ss_pred HHhccchhhhhhhcccccc--CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCC-E-EEEECCCCHHHHHHHHHHcC
Q 042091 600 MAARSLRCVAIAYRFILDK--WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGV-K-VRMVTGDNLQTAKAIALECG 675 (1023)
Q Consensus 600 ~a~~glr~l~~ayk~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi-~-v~mlTGD~~~ta~~ia~~~g 675 (1023)
+...|++|+.++-..-.++ ....+.+-.++++-.......+.+++.++.|+++|. + .+++-|..+..-.+-.++.|
T Consensus 23 l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G 102 (122)
T cd02071 23 LRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMG 102 (122)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCC
Confidence 4556777766663211110 011234556788888888899999999999999977 4 45666666655566677899
Q ss_pred CCC
Q 042091 676 ILG 678 (1023)
Q Consensus 676 i~~ 678 (1023)
+..
T Consensus 103 ~d~ 105 (122)
T cd02071 103 VAE 105 (122)
T ss_pred CCE
Confidence 763
No 219
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=34.97 E-value=2.2e+02 Score=29.96 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCC
Q 042091 183 VFLVIVVTAISDYRQ-SLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS 254 (1023)
Q Consensus 183 lll~~~v~~~~~~~~-~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~ 254 (1023)
++++.++..+.++.+ .+..+.+.+..+. ...+...+ +.-|....+...|.+|-|.+.+..+.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~ 64 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNL------NPQKKVTV----IRDGRWQKIPSSELVPGDIIILKAGD 64 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTT------SSSEEEEE----EETTEEEEEEGGGT-TTSEEEEETTE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhcc------CCCccEEE----EeccccccchHhhccceeeeeccccc
Confidence 344445555545545 4555555555431 11121222 33478999999999999999998543
No 220
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=33.92 E-value=2.1e+02 Score=36.77 Aligned_cols=69 Identities=10% Similarity=0.039 Sum_probs=45.6
Q ss_pred HHHHHHHhccchhhhhhhccccccCCCCCCCcEEEeeeecc-C----CCcccHHHHHHHHHhC-CCEEEEECCCCHHHHH
Q 042091 595 AAVDEMAARSLRCVAIAYRFILDKWTLPEEELILLAIVGIK-D----PCRPGVKDAVKLCRDA-GVKVRMVTGDNLQTAK 668 (1023)
Q Consensus 595 ~~~~~~a~~glr~l~~ayk~~~~~~~~~e~~l~~lG~i~~~-D----~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~ 668 (1023)
+.++.|.+..-|.+.+- -|.|+.....-. + .+-+++.++++.|.+. +..|+++||+...+..
T Consensus 497 ~~~~~y~~a~~rll~LD------------yDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~ 564 (797)
T PLN03063 497 DVIQQYSKSNNRLLILG------------FYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILD 564 (797)
T ss_pred HHHHHHHhccCeEEEEe------------cCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHH
Confidence 34455555555666655 455666432211 1 2567888999999765 7889999999999988
Q ss_pred HHHHHcC
Q 042091 669 AIALECG 675 (1023)
Q Consensus 669 ~ia~~~g 675 (1023)
.....++
T Consensus 565 ~~~~~~~ 571 (797)
T PLN03063 565 KNFGEYN 571 (797)
T ss_pred HHhCCCC
Confidence 8776543
No 221
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.84 E-value=54 Score=36.44 Aligned_cols=63 Identities=17% Similarity=0.245 Sum_probs=38.4
Q ss_pred EeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 711 VMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
-|.-|||..=.++++...- .|+.|+++|-+.. =+-+|...+.-+.+.-+.|. ..-..||+++.
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 136 GLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 3567888887777777653 3899999998843 12245444444433322232 23467888875
No 222
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.68 E-value=1.4e+02 Score=27.58 Aligned_cols=31 Identities=13% Similarity=0.305 Sum_probs=19.5
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHccc
Q 042091 940 GVTKNYLFMGIIGITCVLQIIIIEFLGKFTK 970 (1023)
Q Consensus 940 ~~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~ 970 (1023)
..+++.-+++.++.+++..+++-.++|..++
T Consensus 37 ~~~~~l~~~g~IG~~~v~pil~G~~lG~WLD 67 (100)
T TIGR02230 37 SIWEGLGMFGLIGWSVAIPTLLGVAVGIWLD 67 (100)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566667777777777666666665543
No 223
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=31.50 E-value=23 Score=31.26 Aligned_cols=21 Identities=33% Similarity=0.697 Sum_probs=15.9
Q ss_pred EeccceeccEEEe-cCCCccCc
Q 042091 225 SIFDVVVGEIVPL-RIGDQVPA 245 (1023)
Q Consensus 225 ~~~dLv~GDIV~l-~~Gd~VPa 245 (1023)
.-.+|.+||.|.+ ++||.||-
T Consensus 46 ~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 46 KELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHTT-BBT-EEEEEEETTTEEE
T ss_pred HHcCCCCCCEEEEEECCCccce
Confidence 3468999999998 58999996
No 224
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=31.32 E-value=2.9e+02 Score=30.57 Aligned_cols=160 Identities=14% Similarity=0.114 Sum_probs=83.3
Q ss_pred EeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccccc-----C--------------CC
Q 042091 562 WKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDK-----W--------------TL 621 (1023)
Q Consensus 562 ~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~-----~--------------~~ 621 (1023)
.-|.+..+.+....- +-....-+=.. .++...+.+++++||.++.++.+.-.+- + +.
T Consensus 73 AHGv~~~~~~~~~~~---gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~ 149 (280)
T TIGR00216 73 AHGVPPEVREELEKK---GLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLEN 149 (280)
T ss_pred CCCCCHHHHHHHHHC---CCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHh
Confidence 347777777655431 11222222233 7888999999999999999996533110 0 00
Q ss_pred CCCCcEEEeeeeccCCCcccHHHHHHHHHhCC--C------EEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechh
Q 042091 622 PEEELILLAIVGIKDPCRPGVKDAVKLCRDAG--V------KVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKV 693 (1023)
Q Consensus 622 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG--i------~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~ 693 (1023)
.. ...-++++.=--..+++..+.++.|++.. . .++..|-+....+..+|+++.+.
T Consensus 150 l~-~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m---------------- 212 (280)
T TIGR00216 150 FK-VEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM---------------- 212 (280)
T ss_pred CC-CCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE----------------
Confidence 00 00113333333333444444444444433 1 13333444444444444443332
Q ss_pred hhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhC-CccEEec
Q 042091 694 FRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGT-NDAPALHEA-DIGLAMG 757 (1023)
Q Consensus 694 ~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~-ND~~aL~~A-dvgIamg 757 (1023)
-|.+.-+...-.++.+..++.|..+..+.+-. -|...|+.+ .|||.-|
T Consensus 213 ----------------iVVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 213 ----------------IVIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred ----------------EEECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 23444444455567777788887777776642 256677755 4688777
No 225
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.25 E-value=73 Score=35.36 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=37.7
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc---C-HHHhhh------CCccEEecCCCCH--HHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN---D-APALHE------ADIGLAMGIQGTE--VAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N---D-~~aL~~------AdvgIamg~~g~~--~ak~~adiil~ 773 (1023)
.-|.-|||..=.++++..+- .|+.|+++|-+.. - +.+|.. |.|-++-. ...+ ..-..||+++.
T Consensus 134 ~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs-~T~nl~~~~~~ADIvIs 210 (293)
T PRK14185 134 PCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHS-RSKNLKKECLEADIIIA 210 (293)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecC-CCCCHHHHHhhCCEEEE
Confidence 34677888887777777653 3899999998843 1 224443 33444332 2222 23467888874
No 226
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=31.22 E-value=96 Score=30.20 Aligned_cols=78 Identities=13% Similarity=0.119 Sum_probs=48.1
Q ss_pred HHhccchhhhhhhcccccc--CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCC--EEEEECCCC------HHHHHH
Q 042091 600 MAARSLRCVAIAYRFILDK--WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGV--KVRMVTGDN------LQTAKA 669 (1023)
Q Consensus 600 ~a~~glr~l~~ayk~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi--~v~mlTGD~------~~ta~~ 669 (1023)
+...|++|+-++...-.++ +...|.+-.++|+-++-=.--+..++.++.|+++|. .++++-|-. ......
T Consensus 25 l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~ 104 (134)
T TIGR01501 25 FTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEK 104 (134)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHH
Confidence 3456777766664322111 011234566788877777777788999999999987 355566632 111244
Q ss_pred HHHHcCCC
Q 042091 670 IALECGIL 677 (1023)
Q Consensus 670 ia~~~gi~ 677 (1023)
-++++|+.
T Consensus 105 ~l~~~Gv~ 112 (134)
T TIGR01501 105 RFKEMGFD 112 (134)
T ss_pred HHHHcCCC
Confidence 57888865
No 227
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=31.16 E-value=74 Score=31.84 Aligned_cols=42 Identities=21% Similarity=0.117 Sum_probs=38.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 042091 636 DPCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILG 678 (1023)
Q Consensus 636 D~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 678 (1023)
=.+||++.+.++.|++. +++.++|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 35899999999999955 9999999999999999999998763
No 228
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=30.58 E-value=4.2e+02 Score=34.86 Aligned_cols=37 Identities=30% Similarity=0.201 Sum_probs=22.7
Q ss_pred ECCEEEEEEeccceeccEEEecCCCccCccEEEEeeCC
Q 042091 217 RGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVTGHS 254 (1023)
Q Consensus 217 R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~g~~ 254 (1023)
.-|....+...|.+|.|.+.++. +..=+|=-.+.|++
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~g-~~l~VdES~LTGES 221 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFISG-LSLEIDESSITGES 221 (941)
T ss_pred CCCCEEEECCCCEecccEEEEEc-CcEEEEecccCCCC
Confidence 45777778888888888877753 22334444444444
No 229
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.54 E-value=22 Score=36.30 Aligned_cols=14 Identities=36% Similarity=0.344 Sum_probs=12.6
Q ss_pred eeeCCccccccCce
Q 042091 440 ICSDKTGTLTLNEM 453 (1023)
Q Consensus 440 I~~DKTGTLT~n~m 453 (1023)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999983
No 230
>PF15584 Imm44: Immunity protein 44
Probab=30.31 E-value=23 Score=31.58 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=15.6
Q ss_pred eccEEEecCCCccCccEEE
Q 042091 231 VGEIVPLRIGDQVPADGVL 249 (1023)
Q Consensus 231 ~GDIV~l~~Gd~VPaDgil 249 (1023)
+.+-..|+.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556778999999999985
No 231
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=30.18 E-value=8.9e+02 Score=31.52 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=24.8
Q ss_pred ccEEEecCCCccCccEEEEeeCC-eEEeeccccCCCc
Q 042091 232 GEIVPLRIGDQVPADGVLVTGHS-LAIDESSMTGESK 267 (1023)
Q Consensus 232 GDIV~l~~Gd~VPaDgill~g~~-l~VDES~LTGES~ 267 (1023)
|....+...|.+|-|.++++... +-+|=-.+.|++.
T Consensus 139 g~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l 175 (867)
T TIGR01524 139 GSMDEVPIDALVPGDLIELAAGDIIPADARVISARDL 175 (867)
T ss_pred CeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCce
Confidence 67788888889999988888543 3345555555543
No 232
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=29.23 E-value=6.5e+02 Score=27.88 Aligned_cols=16 Identities=31% Similarity=0.368 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHh
Q 042091 829 LLWVNLIMDTLGALAL 844 (1023)
Q Consensus 829 ll~~nli~d~l~~lal 844 (1023)
++..|++||.+.-..-
T Consensus 8 ~fl~N~~md~~lL~~t 23 (293)
T PF03419_consen 8 LFLVNFLMDYFLLWLT 23 (293)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678999998754433
No 233
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.05 E-value=81 Score=34.85 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=38.4
Q ss_pred eEeccCCHhhHHHHHHHHHhC--CCEEEEEcCCcc----CHHHhhhCCccEEecCCCC-HH--HHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRKG--GDVVAVTGDGTN----DAPALHEADIGLAMGIQGT-EV--AKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~~--g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~-~~--ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...-. |+.|+++|-|.. =+-+|...+.-+.+.-+-| +. --..||+++.
T Consensus 135 ~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIs 207 (282)
T PRK14180 135 KCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIV 207 (282)
T ss_pred CCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEE
Confidence 345678888877777776533 899999998844 1224544444444432222 22 3467888775
No 234
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.98 E-value=3e+02 Score=30.53 Aligned_cols=44 Identities=14% Similarity=0.208 Sum_probs=29.0
Q ss_pred cCCCcccHHHHHHHHHhC-CCE---EEEECCCCHHHHH------HHHHHcCCCC
Q 042091 635 KDPCRPGVKDAVKLCRDA-GVK---VRMVTGDNLQTAK------AIALECGILG 678 (1023)
Q Consensus 635 ~D~lr~~~~~~I~~l~~a-Gi~---v~mlTGD~~~ta~------~ia~~~gi~~ 678 (1023)
.+.++++.++-++.+++. |++ .++.-||++.... ..++++||..
T Consensus 12 a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~ 65 (283)
T PRK14192 12 AKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDS 65 (283)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeE
Confidence 345677888888888766 665 3556677776553 4456778764
No 235
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=28.95 E-value=2.8e+02 Score=30.33 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=21.0
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCccCHHH
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTNDAPA 746 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~ND~~a 746 (1023)
+++-.++++.+++.-..-.++|-|+|+...
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 455667788888765555677999995543
No 236
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=28.74 E-value=72 Score=34.30 Aligned_cols=96 Identities=7% Similarity=0.002 Sum_probs=51.2
Q ss_pred cccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHh
Q 042091 639 RPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPN 718 (1023)
Q Consensus 639 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~ 718 (1023)
-++..++++.|++.|++. ++|......+.......|.. .-+. .+...-.+...+..-+|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g--------------~~~~-----~i~~~g~~~~~~gKP~~~ 199 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG--------------YYAE-----LIKQLGGKVIYSGKPYPA 199 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc--------------HHHH-----HHHHhCCcEecCCCCCHH
Confidence 478899999999999997 66775554443222222211 0000 000000011112333333
Q ss_pred hHHHHHHHHHhC-CCEEEEEcCC-ccCHHHhhhCCccE
Q 042091 719 DKLLLVQALRKG-GDVVAVTGDG-TNDAPALHEADIGL 754 (1023)
Q Consensus 719 ~K~~iV~~lq~~-g~~V~~iGDG-~ND~~aL~~AdvgI 754 (1023)
-=....+.+... .+.++|+||. .+|..+=+.|++-.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 200 IFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 223344444322 3479999999 59999888887653
No 237
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=28.09 E-value=1.5e+03 Score=29.70 Aligned_cols=87 Identities=11% Similarity=0.148 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccCceEEEEECCEEEEEEecccee---ccEEEecCCCccCccEEEEe
Q 042091 176 GASIAFAVFLVIVVTAISDYRQS-LQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVV---GEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 176 ~~~i~~~lll~~~v~~~~~~~~~-~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~---GDIV~l~~Gd~VPaDgill~ 251 (1023)
...-.++++++++++.+-++.++ ++-+.+.++.. . ... + ..|- .+-.. |....+...|.+|-|.++++
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~-l----~~~-~-a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~ 192 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKA-M----VSN-T-ATVL-RVINDKGENGWLEIPIDQLVPGDIIKLA 192 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h----CCC-e-EEEE-ECCccCCCCeEEEEEHHhCCCCCEEEEC
Confidence 33444555556666666666555 44555565542 1 111 1 1221 11111 56889999999999999998
Q ss_pred eCC-eEEeeccccCCCceec
Q 042091 252 GHS-LAIDESSMTGESKIVR 270 (1023)
Q Consensus 252 g~~-l~VDES~LTGES~pv~ 270 (1023)
... +-+|=-.+.|+..-+.
T Consensus 193 ~Gd~IPaDg~li~g~~l~VD 212 (902)
T PRK10517 193 AGDMIPADLRILQARDLFVA 212 (902)
T ss_pred CCCEEeeeEEEEEcCceEEE
Confidence 543 4456666677664443
No 238
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=27.95 E-value=3.3e+02 Score=30.47 Aligned_cols=49 Identities=8% Similarity=0.060 Sum_probs=32.0
Q ss_pred EeCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhc
Q 042091 562 WKGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYR 613 (1023)
Q Consensus 562 ~KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk 613 (1023)
.-|.+..+.+...+ .+-.....+=.. .++.+.+.+++.+||.++.++.+
T Consensus 73 AHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~ 122 (298)
T PRK01045 73 AHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHK 122 (298)
T ss_pred CCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCC
Confidence 34777777765542 111222222233 78889999999999999999954
No 239
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=27.88 E-value=72 Score=35.25 Aligned_cols=159 Identities=13% Similarity=0.177 Sum_probs=76.8
Q ss_pred eCchHHHHHhhccccccCCccccCCchH-HHHHHHHHHHHhccchhhhhhhcccccc-----C----------------C
Q 042091 563 KGAAEMILASCTKYLDTDGQLQSIDGDE-DFFKAAVDEMAARSLRCVAIAYRFILDK-----W----------------T 620 (1023)
Q Consensus 563 KGa~e~il~~c~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~glr~l~~ayk~~~~~-----~----------------~ 620 (1023)
-|.+..+.+.... .+-.....+=.. .++.+.+.+++++||.++.++-+.-.+- + .
T Consensus 72 HGv~~~~~~~l~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~ 148 (281)
T PF02401_consen 72 HGVPPEVYEELKE---RGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEK 148 (281)
T ss_dssp T---HHHHHHHHH---TTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHH
T ss_pred CCCCHHHHHHHHH---cCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcc
Confidence 3777777665442 111122223334 7888999999999999999986543110 0 0
Q ss_pred CCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCCEEE--------EECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeech
Q 042091 621 LPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGVKVR--------MVTGDNLQTAKAIALECGILGSDAEANDPNIIEGK 692 (1023)
Q Consensus 621 ~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi~v~--------mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~ 692 (1023)
.+..+..-++++.=--..+++..+.++.|++..-... ..|-+....+..+|+++.+.
T Consensus 149 l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m--------------- 213 (281)
T PF02401_consen 149 LPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM--------------- 213 (281)
T ss_dssp GGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE---------------
T ss_pred cCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE---------------
Confidence 0011112233333333444444455555544433332 11222222333333322221
Q ss_pred hhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhC-CccEEec
Q 042091 693 VFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTND--APALHEA-DIGLAMG 757 (1023)
Q Consensus 693 ~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND--~~aL~~A-dvgIamg 757 (1023)
.|.+.-+...-.++.+..++.|..+..+.+- .| ...|+.+ .|||.-|
T Consensus 214 -----------------iVIGg~~SsNT~kL~eia~~~~~~t~~Ie~~-~el~~~~l~~~~~VGItaG 263 (281)
T PF02401_consen 214 -----------------IVIGGKNSSNTRKLAEIAKEHGKPTYHIETA-DELDPEWLKGVKKVGITAG 263 (281)
T ss_dssp -----------------EEES-TT-HHHHHHHHHHHHCTTCEEEESSG-GG--HHHHTT-SEEEEEE-
T ss_pred -----------------EEecCCCCccHHHHHHHHHHhCCCEEEeCCc-cccCHhHhCCCCEEEEEcc
Confidence 2445555566677888889888888888764 34 4467777 8899888
No 240
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=27.63 E-value=1.6e+02 Score=30.00 Aligned_cols=107 Identities=13% Similarity=0.169 Sum_probs=64.7
Q ss_pred cHHHHHHHHHhCCCEEEEECCCCHHH-HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhh
Q 042091 641 GVKDAVKLCRDAGVKVRMVTGDNLQT-AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPND 719 (1023)
Q Consensus 641 ~~~~~I~~l~~aGi~v~mlTGD~~~t-a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~ 719 (1023)
|...+++.+++.|-++-+++=.+... ...+..-+|+. +..+.=.++++
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-------------------------------i~~~~~~~~~e 113 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-------------------------------IKIYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-------------------------------EEEEEESSHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-------------------------------eEEEEECCHHH
Confidence 44555555555565666665444443 55555555553 23455567888
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCCHHHHhccCccccCCChhHHHHHHHHHHHHHHhhHH
Q 042091 720 KLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKENSDIIILDDNFASVVKVVRWGRSVFANIQK 796 (1023)
Q Consensus 720 K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~AdvgIamg~~g~~~ak~~adiil~~~~~~~i~~~i~~gR~~~~~i~~ 796 (1023)
=...++.+++.| .-+.+|++.- +..-++. .-..++...+..++..++.+++++++..++
T Consensus 114 ~~~~i~~~~~~G-~~viVGg~~~-~~~A~~~----------------gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 114 IEAAIKQAKAEG-VDVIVGGGVV-CRLARKL----------------GLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHTT---EEEESHHH-HHHHHHT----------------TSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CcEEECCHHH-HHHHHHc----------------CCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 888999999988 4566777632 2222222 233456666789999999999999887764
No 241
>PLN02591 tryptophan synthase
Probab=27.47 E-value=3.8e+02 Score=29.12 Aligned_cols=86 Identities=19% Similarity=0.159 Sum_probs=47.5
Q ss_pred ccHHHHHHHHHhCCCEEE-EECCCC-HHHHHHHHHHc-CCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCC
Q 042091 640 PGVKDAVKLCRDAGVKVR-MVTGDN-LQTAKAIALEC-GILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSS 716 (1023)
Q Consensus 640 ~~~~~~I~~l~~aGi~v~-mlTGD~-~~ta~~ia~~~-gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~ 716 (1023)
++..+..+.|++.|+..+ ++|-.. .+..+.+|+.. |..- . -...-++|.. ...
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-~---Vs~~GvTG~~--------------------~~~ 173 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-L---VSSTGVTGAR--------------------ASV 173 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-E---eeCCCCcCCC--------------------cCC
Confidence 667777777777777643 444444 24566666654 2210 0 0000011110 122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcc---CHHHhhh
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDGTN---DAPALHE 749 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG~N---D~~aL~~ 749 (1023)
|++-.+.++.+++....-.++|-|++ |+..+.+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 66667778888887666778899998 4555444
No 242
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=27.32 E-value=1.1e+02 Score=26.03 Aligned_cols=31 Identities=29% Similarity=0.248 Sum_probs=23.7
Q ss_pred ceEEEEECCEEEEEEe---ccceeccEEEecCCC
Q 042091 211 IQLEAMRGGKAVKISI---FDVVVGEIVPLRIGD 241 (1023)
Q Consensus 211 ~~~~V~R~g~~~~I~~---~dLv~GDIV~l~~Gd 241 (1023)
..+.|-.+|..++|+. .++.|||.|++..|-
T Consensus 17 ~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 17 GMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 4677778999999974 578899999999884
No 243
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=26.36 E-value=1.4e+02 Score=25.99 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=39.0
Q ss_pred eeeccCCCcccHHHHHHHHHhCCCEEEE-ECCCCHHHHHHHHHHcCCC
Q 042091 631 IVGIKDPCRPGVKDAVKLCRDAGVKVRM-VTGDNLQTAKAIALECGIL 677 (1023)
Q Consensus 631 ~i~~~D~lr~~~~~~I~~l~~aGi~v~m-lTGD~~~ta~~ia~~~gi~ 677 (1023)
++.+.+..++.+.+..+.|+++|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 4455677888999999999999999988 6777777888888888886
No 244
>PRK11507 ribosome-associated protein; Provisional
Probab=26.00 E-value=65 Score=27.54 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.6
Q ss_pred EEEECCEEEEEEeccceeccEEEecC
Q 042091 214 EAMRGGKAVKISIFDVVVGEIVPLRI 239 (1023)
Q Consensus 214 ~V~R~g~~~~I~~~dLv~GDIV~l~~ 239 (1023)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 56779999999999999999999853
No 245
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.62 E-value=86 Score=34.65 Aligned_cols=64 Identities=22% Similarity=0.344 Sum_probs=38.7
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc-CHH---Hhhh--CCccEEecCCCCH---HHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN-DAP---ALHE--ADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N-D~~---aL~~--AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
.-+.-|||..=.++++..+- .|+.|+++|-+.. =-| +|.. .+..+.+.-+.|. ..-..||+++.
T Consensus 135 ~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~ 209 (284)
T PRK14193 135 PAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVA 209 (284)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEE
Confidence 33567888887777777654 3899999998844 122 4443 4444444323332 23467888875
No 246
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=25.61 E-value=1.8e+02 Score=32.34 Aligned_cols=74 Identities=30% Similarity=0.421 Sum_probs=45.9
Q ss_pred CEEEEECCCCHHHHHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh----
Q 042091 654 VKVRMVTGDNLQTAKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK---- 729 (1023)
Q Consensus 654 i~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~---- 729 (1023)
+..+|+-|....+...+|+..++.- +.| +++ ..-|.|-+.=+..+++
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VPV----------iNg-----LtD--------------~~HP~Q~LADl~Ti~E~~g~ 150 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVPV----------ING-----LTD--------------EFHPCQALADLMTIKEHFGS 150 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCce----------Ecc-----ccc--------------ccCcHHHHHHHHHHHHhcCc
Confidence 6678999999999999999988862 222 111 1235444433334444
Q ss_pred -CCCEEEEEcCCccCHH--HhhhCCccEEe
Q 042091 730 -GGDVVAVTGDGTNDAP--ALHEADIGLAM 756 (1023)
Q Consensus 730 -~g~~V~~iGDG~ND~~--aL~~AdvgIam 756 (1023)
+|.+++++|||.|=+. ++..|=.|+-+
T Consensus 151 l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 151 LKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred ccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 3789999999944332 44555444443
No 247
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=25.40 E-value=81 Score=41.49 Aligned_cols=62 Identities=24% Similarity=0.372 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCc----eE------EEEECCEEEEEEeccceeccEEEecCCC
Q 042091 180 AFAVFLVIVVTAISDYRQSLQFQNLNKEKRNI----QL------EAMRGGKAVKISIFDVVVGEIVPLRIGD 241 (1023)
Q Consensus 180 ~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~----~~------~V~R~g~~~~I~~~dLv~GDIV~l~~Gd 241 (1023)
.+++.+..+-.+++||+++++..+.+...... .+ +-++-|..+.+.-.+.+|+|++++...+
T Consensus 88 ~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~ 159 (1151)
T KOG0206|consen 88 LFVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSD 159 (1151)
T ss_pred eeeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCC
Confidence 34455666889999999999988887653211 11 1235688888999999999999998755
No 248
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.65 E-value=1e+02 Score=34.10 Aligned_cols=64 Identities=20% Similarity=0.258 Sum_probs=38.2
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc-CHH---HhhhCCccEEecCCCCH-H--HHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN-DAP---ALHEADIGLAMGIQGTE-V--AKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N-D~~---aL~~AdvgIamg~~g~~-~--ak~~adiil~ 773 (1023)
.-|.-|||..=.++++..+- .|+.|+++|.|.. =-| +|...+.-+.+.-+-|. . .-..||+++.
T Consensus 134 ~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~ 206 (281)
T PRK14183 134 DGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIV 206 (281)
T ss_pred CCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEE
Confidence 34567788777777766643 3899999999833 222 45444444433322332 2 3467888875
No 249
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.61 E-value=25 Score=37.88 Aligned_cols=6 Identities=33% Similarity=0.368 Sum_probs=0.0
Q ss_pred ccCCCC
Q 042091 855 HRLPVG 860 (1023)
Q Consensus 855 ~~~P~~ 860 (1023)
+||||.
T Consensus 13 ~r~pr~ 18 (381)
T PF05297_consen 13 RRPPRC 18 (381)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 356653
No 250
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=24.52 E-value=1.4e+03 Score=30.02 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=19.8
Q ss_pred ccEEEecCCCccCccEEEEeeCC-eEEeeccccCCC
Q 042091 232 GEIVPLRIGDQVPADGVLVTGHS-LAIDESSMTGES 266 (1023)
Q Consensus 232 GDIV~l~~Gd~VPaDgill~g~~-l~VDES~LTGES 266 (1023)
|....+...|.+|-|.++++... +-+|=-.+.|++
T Consensus 162 g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~ 197 (903)
T PRK15122 162 PVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD 197 (903)
T ss_pred CeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc
Confidence 34566667777777777766332 334444444544
No 251
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.30 E-value=6.4e+02 Score=27.96 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=75.3
Q ss_pred eeeeccCCCccc--HHHHHHHHHhCCCEEEEE--CCC-CHHHHHHHHHHcCCCCCCCCCCCCeeee--------------
Q 042091 630 AIVGIKDPCRPG--VKDAVKLCRDAGVKVRMV--TGD-NLQTAKAIALECGILGSDAEANDPNIIE-------------- 690 (1023)
Q Consensus 630 G~i~~~D~lr~~--~~~~I~~l~~aGi~v~ml--TGD-~~~ta~~ia~~~gi~~~~~~~~~~~vi~-------------- 690 (1023)
+++...|.+-.. ++.-++.|++.|+++.++ ..+ ..+...+.=++++-++.. +.+++-
T Consensus 37 aii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V----~GIlvqlPLp~~i~~~~i~~ 112 (284)
T PRK14177 37 ATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNV----DGILLQHPVPSQIDERAAFD 112 (284)
T ss_pred EEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC----CeEEEcCCCCCCCCHHHHHh
Confidence 344444444333 355688899999987774 333 333344444455443221 112211
Q ss_pred ----chhhhccCHHHHHHHHhhceEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCC
Q 042091 691 ----GKVFRALSDKEREKVAQEITVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQG 760 (1023)
Q Consensus 691 ----g~~~~~l~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g 760 (1023)
-++.+.++...+.++...-.-|..|||..=.++++...- .|+.|+++|-+.. =+.+|...+.-+.+.-+.
T Consensus 113 ~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~ 192 (284)
T PRK14177 113 RIALEKDVDGVTTLSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK 192 (284)
T ss_pred ccCcccccccCChhhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence 122233344444455544455778888777777766543 3889999998744 122455544444443233
Q ss_pred CH---HHHhccCcccc
Q 042091 761 TE---VAKENSDIIIL 773 (1023)
Q Consensus 761 ~~---~ak~~adiil~ 773 (1023)
|. ..-..||+++.
T Consensus 193 T~~l~~~~~~ADIvIs 208 (284)
T PRK14177 193 TQNLPSIVRQADIIVG 208 (284)
T ss_pred CCCHHHHHhhCCEEEE
Confidence 32 24567888875
No 252
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=24.12 E-value=1.2e+02 Score=28.43 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=29.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHcCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQTAKAIALECGI 676 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 676 (1023)
---+++.++++.+++.|++++.+|++.+ -...+.+-|.
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 3456889999999999999999999874 3335555454
No 253
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=23.25 E-value=1.2e+02 Score=30.73 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=31.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEC-CCCHHHHHHHHHHcCCC
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVT-GDNLQTAKAIALECGIL 677 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlT-GD~~~ta~~ia~~~gi~ 677 (1023)
.+-|+++++++.|++.|+++-+.| -+.+..|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 577999999999999999999999 58899999999999998
No 254
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=22.16 E-value=3.6e+02 Score=29.06 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=54.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEECCCCHHH----HHHHHHHcCCCCCCCCCCCCeeeechhhhccCHHHHHHHHhhceEe
Q 042091 637 PCRPGVKDAVKLCRDAGVKVRMVTGDNLQT----AKAIALECGILGSDAEANDPNIIEGKVFRALSDKEREKVAQEITVM 712 (1023)
Q Consensus 637 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t----a~~ia~~~gi~~~~~~~~~~~vi~g~~~~~l~~~~~~~~~~~~~v~ 712 (1023)
.+=||+.|.++...+.|.+|..+|-+.... +..=-++.|+..... ...++
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~--------------------------~~~ll 175 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE--------------------------SHLLL 175 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc--------------------------cceEE
Confidence 466899999999999999999999887765 333344566653211 00111
Q ss_pred --ccCCHhhHHHHHHHHHhCCCEEEEEcCCccCHHHhhh
Q 042091 713 --GRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHE 749 (1023)
Q Consensus 713 --ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~~aL~~ 749 (1023)
-..+.+...+.|+. .-.+|+.+||..+|-.....
T Consensus 176 kk~~k~Ke~R~~~v~k---~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 176 KKDKKSKEVRRQAVEK---DYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred eeCCCcHHHHHHHHhh---ccceeeEecCchhhhcchhh
Confidence 12344444444443 45688899999998765443
No 255
>PRK06846 putative deaminase; Validated
Probab=22.15 E-value=1e+03 Score=27.72 Aligned_cols=123 Identities=15% Similarity=0.116 Sum_probs=68.6
Q ss_pred EEeeeeccCCC--cccHHHHHHHHHhCCCEEE-EECCCC--------HHHHHHHHHHcCCCCCCCCCCCCeeeechhhh-
Q 042091 628 LLAIVGIKDPC--RPGVKDAVKLCRDAGVKVR-MVTGDN--------LQTAKAIALECGILGSDAEANDPNIIEGKVFR- 695 (1023)
Q Consensus 628 ~lG~i~~~D~l--r~~~~~~I~~l~~aGi~v~-mlTGD~--------~~ta~~ia~~~gi~~~~~~~~~~~vi~g~~~~- 695 (1023)
-.+++.+.+.- +....+.+++..+.|..++ .+.-.. .......|++.|+.-. ..+....-.
T Consensus 161 ~~~~~a~~~~g~~~~~~~~lL~~al~~Ga~~i~gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~-------~Hv~e~~~~~ 233 (410)
T PRK06846 161 TYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVD-------IHLHDTGPLG 233 (410)
T ss_pred eEEEEeccCcccCCccHHHHHHHHHHcCCCEEeCCCCccCCcCHHHHHHHHHHHHHHhCCCcE-------EEECCCCChh
Confidence 34455554432 4556677888888886533 222222 5667888888887632 111100000
Q ss_pred ccCHHHHHHHHhhc-----e--Eec----cCCHhhHHHHHHHHHhCCCEEEE---EcCCccCHHHhhhCCccEEec
Q 042091 696 ALSDKEREKVAQEI-----T--VMG----RSSPNDKLLLVQALRKGGDVVAV---TGDGTNDAPALHEADIGLAMG 757 (1023)
Q Consensus 696 ~l~~~~~~~~~~~~-----~--v~a----r~~P~~K~~iV~~lq~~g~~V~~---iGDG~ND~~aL~~AdvgIamg 757 (1023)
....++.-+...+. . .+| ..+.++-.++++.+++.|-.|.. .|.|......|.+++|-+++|
T Consensus 234 ~~~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~~~~g~~p~~~l~~~Gv~v~lG 309 (410)
T PRK06846 234 VATIKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLG 309 (410)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCCCCCCCCCHHHHHhCCCeEEEe
Confidence 00001111111111 1 122 23455556678899999865543 488999999999999999988
No 256
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=22.08 E-value=1.7e+02 Score=25.97 Aligned_cols=48 Identities=19% Similarity=0.230 Sum_probs=39.3
Q ss_pred eeeeccC---CCcccHHHHHHHHHhCCCEEEEE-CCCCHHHHHHHHHHcCCC
Q 042091 630 AIVGIKD---PCRPGVKDAVKLCRDAGVKVRMV-TGDNLQTAKAIALECGIL 677 (1023)
Q Consensus 630 G~i~~~D---~lr~~~~~~I~~l~~aGi~v~ml-TGD~~~ta~~ia~~~gi~ 677 (1023)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4556666 67778899999999999998887 677777888888888887
No 257
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.80 E-value=1.3e+02 Score=33.52 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=36.4
Q ss_pred EeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc---C-HHHhhh------CCccEEecCCCCH--HHHhccCcccc
Q 042091 711 VMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN---D-APALHE------ADIGLAMGIQGTE--VAKENSDIIIL 773 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N---D-~~aL~~------AdvgIamg~~g~~--~ak~~adiil~ 773 (1023)
-|.-|||..=.++++...- .|+.|+++|.+.. - +.+|.. |.|-++-. ...+ ..-..||+++.
T Consensus 139 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs-~T~~l~~~~~~ADIvVs 214 (297)
T PRK14168 139 KFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHT-RSKNLARHCQRADILIV 214 (297)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecC-CCcCHHHHHhhCCEEEE
Confidence 4567788777777666543 3899999998843 1 123433 44555432 2222 23477888875
No 258
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=21.66 E-value=1.3e+02 Score=34.35 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=35.9
Q ss_pred eEeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 710 TVMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 710 ~v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
.-|.-|||..=.++++...- .|+.|.++|-+.- =+-+|...|.-+.+--+-|. ..-..||+++.
T Consensus 208 ~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIs 280 (364)
T PLN02616 208 PLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIIS 280 (364)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEE
Confidence 34667888876666655443 2889999998733 12245444433433322221 23466787764
No 259
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.50 E-value=1.3e+02 Score=33.43 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=37.2
Q ss_pred EeccCCHhhHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEEecCCCCH---HHHhccCcccc
Q 042091 711 VMGRSSPNDKLLLVQALRK--GGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE---VAKENSDIIIL 773 (1023)
Q Consensus 711 v~ar~~P~~K~~iV~~lq~--~g~~V~~iGDG~N----D~~aL~~AdvgIamg~~g~~---~ak~~adiil~ 773 (1023)
-|.-|||..=.++++...- .|+.|+++|-+.. =+-+|...|.-+.+--+-|. ..-..||+++.
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVs 209 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVA 209 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4667888877777766543 3889999998743 12245444444444322222 23467788764
No 260
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=21.10 E-value=6.3e+02 Score=29.22 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=24.7
Q ss_pred eEeccCCHh-hHHHHHHHHHhCCCEEEEEc-CCccCHHHh
Q 042091 710 TVMGRSSPN-DKLLLVQALRKGGDVVAVTG-DGTNDAPAL 747 (1023)
Q Consensus 710 ~v~ar~~P~-~K~~iV~~lq~~g~~V~~iG-DG~ND~~aL 747 (1023)
.+..-.+.+ .=.++.+..+++|+.|.+-+ |..|.+--|
T Consensus 218 pLL~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~L 257 (389)
T TIGR00381 218 CLLASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTL 257 (389)
T ss_pred cEEEecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHH
Confidence 345555666 44567777788898776666 776666544
No 261
>PLN03190 aminophospholipid translocase; Provisional
Probab=20.93 E-value=3.2e+02 Score=36.75 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=50.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCceEEEEECCEEEEEEeccceeccEEEecCCCccCccEEEEe
Q 042091 172 GWYDGASIAFAVFLVIVVTAISDYRQSLQFQNLNKEKRNIQLEAMRGGKAVKISIFDVVVGEIVPLRIGDQVPADGVLVT 251 (1023)
Q Consensus 172 ~~~~~~~i~~~lll~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R~g~~~~I~~~dLv~GDIV~l~~Gd~VPaDgill~ 251 (1023)
......+.+++++++.++.++.+..++.+.++.+ ..+ +.+...+ +.-|..+.++..|..|-|.+.+.
T Consensus 132 s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d-----~~~----N~~~~~v----~~~~~~~~i~~~~i~vGDiv~v~ 198 (1178)
T PLN03190 132 AVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSD-----RIE----NNRLAWV----LVDDQFQEKKWKDIRVGEIIKIQ 198 (1178)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH-----Hhh----cCcEEEE----EECCeEEEEeHHHCCCCCEEEEC
Confidence 4455667888999999999999998887765432 222 2333222 34578888999999999999998
Q ss_pred eCC
Q 042091 252 GHS 254 (1023)
Q Consensus 252 g~~ 254 (1023)
.+.
T Consensus 199 ~ge 201 (1178)
T PLN03190 199 AND 201 (1178)
T ss_pred CCC
Confidence 553
No 262
>TIGR02854 spore_II_GA sigma-E processing peptidase SpoIIGA. Members of this protein family are the stage II sporulation protein SpoIIGA. This protein acts as an activating protease for Sigma-E, one of several specialized sigma factors of the sporulation process in Bacillus subtilis and related endospore-forming bacteria.
Probab=20.70 E-value=1.1e+03 Score=26.24 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHh
Q 042091 829 LLWVNLIMDTLGALAL 844 (1023)
Q Consensus 829 ll~~nli~d~l~~lal 844 (1023)
++..|++||.+.-+.-
T Consensus 8 ~~l~Nf~~d~~LL~~t 23 (288)
T TIGR02854 8 VFLENFIIDYFLLYLT 23 (288)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678999998754433
No 263
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=20.63 E-value=1.5e+02 Score=28.91 Aligned_cols=79 Identities=10% Similarity=0.138 Sum_probs=52.4
Q ss_pred HHHhccchhhhhhhcccccc--CCCCCCCcEEEeeeeccCCCcccHHHHHHHHHhCCC-E-EEEECCCC------HHHHH
Q 042091 599 EMAARSLRCVAIAYRFILDK--WTLPEEELILLAIVGIKDPCRPGVKDAVKLCRDAGV-K-VRMVTGDN------LQTAK 668 (1023)
Q Consensus 599 ~~a~~glr~l~~ayk~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGi-~-v~mlTGD~------~~ta~ 668 (1023)
-+...|++|+.++...-.++ ....+.+-.++|+-.+.-...+.+++.++.|++.|. + .+++-|-- +....
T Consensus 26 ~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~ 105 (137)
T PRK02261 26 ALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVE 105 (137)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHH
Confidence 34568888888875432211 111245667888888888999999999999999965 2 34555533 34455
Q ss_pred HHHHHcCCC
Q 042091 669 AIALECGIL 677 (1023)
Q Consensus 669 ~ia~~~gi~ 677 (1023)
.-++++|..
T Consensus 106 ~~l~~~G~~ 114 (137)
T PRK02261 106 KKFKEMGFD 114 (137)
T ss_pred HHHHHcCCC
Confidence 677888864
No 264
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=20.34 E-value=73 Score=27.18 Aligned_cols=57 Identities=19% Similarity=0.231 Sum_probs=35.8
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCccEEecCCCC---HHH---HhccCcccc
Q 042091 717 PNDKLLLVQALRKGGDVVAVTGDG-TNDAPALHEADIGLAMGIQGT---EVA---KENSDIIIL 773 (1023)
Q Consensus 717 P~~K~~iV~~lq~~g~~V~~iGDG-~ND~~aL~~AdvgIamg~~g~---~~a---k~~adiil~ 773 (1023)
|.-=..+.+.+.-....++||||. ..|..+=+++++--.+-.+|. +.. ...+|+++.
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 333344445554445679999999 999999999987543321322 222 257788775
No 265
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=20.29 E-value=1.1e+02 Score=32.71 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=32.3
Q ss_pred eccCCCcccHHHHHHHHHhCCCEEEEEC---CCCHHHHHHHHHH-cCCC
Q 042091 633 GIKDPCRPGVKDAVKLCRDAGVKVRMVT---GDNLQTAKAIALE-CGIL 677 (1023)
Q Consensus 633 ~~~D~lr~~~~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~-~gi~ 677 (1023)
.-.+.+=+++.++|+.++++|++++++| |.........-.+ .|+.
T Consensus 10 ~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 10 WLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 3345566799999999999999999998 5555544443334 5664
Done!