Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>042094
MTIKELEERVEQLSHQFNEKVEVLSQQSNDLQELILSLHDQFIRFQEDRNNNQPLQINNQ
QPEPAGRIGGALVQPRHIRLDFLVLSGENPTSLIFRCEQYQRLAALLETDVLSLAIGHLD
GDAVPWYHWLEQTMGNMTWAQFKRALVTQFGTFEDGDAVGTQNLPESFFISCFLSGLRED
IKIGVQMLKPASLLQTFELARFQEEYAAVSNRRIPPRPSMSRPSPPLLNSSPTITKTGGS
SQPSLLGPPPPGLPPFRRLSVAEQTERRAKGLCFNCDEQFKPGHRCKAPQLLLLDADIED
KDEQAEALEELPETLEVSLKALTGATPQNTMRLKGNLKKHGVTILIDSSSTHIFLNSSLA
KQYGCPVTTTTQFQVTVADGGVISSSGKCSHVPVNSQGFQFHLDFFLLPVSGCDIVLGAE
WLRSLGAILWDFSKLTMQFTWKGQTVQLTGYDSLPPALANHGEINQLLLQEKQGIFFQIM
AITTS

High Scoring Gene Products

No gene products matching your query constraints were returned by the BLAST search.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042094
        (485 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091793 - symbol:AT3G29750 species:3702 "Arabi...   110  0.00054   2


>TAIR|locus:2091793 [details] [associations]
            symbol:AT3G29750 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
            "aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006418 "tRNA aminoacylation for protein translation"
            evidence=IEA] InterPro:IPR018150 GO:GO:0005524 GO:GO:0005737
            EMBL:CP002686 GO:GO:0006508 GO:GO:0008233 GO:GO:0006418
            InterPro:IPR021109 SUPFAM:SSF50630 GO:GO:0004812 PANTHER:PTHR22594
            InterPro:IPR013242 Pfam:PF08284 IPI:IPI00544562 RefSeq:NP_189618.1
            UniGene:At.53581 ProteinModelPortal:F4J487
            EnsemblPlants:AT3G29750.1 GeneID:822661 KEGG:ath:AT3G29750
            PhylomeDB:F4J487 ArrayExpress:F4J487 Uniprot:F4J487
        Length = 421

 Score = 110 (43.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
 Identities = 33/125 (26%), Positives = 50/125 (40%)

Query:   326 TPQNTMRLKGNLKKHGVTILIDSSSTHIFLNSSLAKQYGCPXXXXXXXXXXXADGGVISS 385
             T    MR  G +  H V + IDS +T  F+   LA     P                I S
Sbjct:   119 TRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQS 178

Query:   386 SGKCSHVPVNSQGFQFHLDFFLLPVS--GCDIVLGAEWLRSLGAILWDFSKLTMQFTWKG 443
              G C  + +  Q  +   +F LL ++    D++LG EWL  LG  + ++      F+   
Sbjct:   179 VGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQ 238

Query:   444 QTVQL 448
             Q + L
Sbjct:   239 QWITL 243

 Score = 49 (22.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query:   164 LPESFFISCFLSGLREDIKIGVQMLKP 190
             LP   F   FL GL+  ++  V+ LKP
Sbjct:    35 LPGQGFEEMFLQGLQPSLQTAVRELKP 61


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      485       404   0.00099  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  260 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.32u 0.07s 27.39t   Elapsed:  00:00:01
  Total cpu time:  27.32u 0.07s 27.39t   Elapsed:  00:00:01
  Start:  Mon May 20 21:17:17 2013   End:  Mon May 20 21:17:18 2013

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