Query 042102
Match_columns 317
No_of_seqs 226 out of 1756
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 04:21:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgs_A Dehydrogenase; structur 100.0 7.2E-75 2.5E-79 546.8 30.4 314 3-317 26-340 (340)
2 4g2n_A D-isomer specific 2-hyd 100.0 2.9E-73 1E-77 536.8 38.4 313 5-317 26-345 (345)
3 4e5n_A Thermostable phosphite 100.0 6.5E-71 2.2E-75 519.1 34.0 311 6-317 1-326 (330)
4 3kb6_A D-lactate dehydrogenase 100.0 6.1E-72 2.1E-76 526.7 25.3 305 8-315 1-326 (334)
5 3k5p_A D-3-phosphoglycerate de 100.0 3.1E-70 1.1E-74 525.5 35.1 311 5-317 13-331 (416)
6 1sc6_A PGDH, D-3-phosphoglycer 100.0 1.7E-69 5.9E-74 521.4 34.8 311 5-317 2-320 (404)
7 3hg7_A D-isomer specific 2-hyd 100.0 2.3E-69 7.9E-74 506.2 28.1 302 6-317 4-311 (324)
8 2pi1_A D-lactate dehydrogenase 100.0 1.2E-69 4E-74 511.1 24.5 307 8-317 1-328 (334)
9 2yq5_A D-isomer specific 2-hyd 100.0 7.1E-69 2.4E-73 506.5 28.4 308 8-317 2-332 (343)
10 3evt_A Phosphoglycerate dehydr 100.0 5E-69 1.7E-73 504.5 26.5 302 8-317 2-311 (324)
11 3gg9_A D-3-phosphoglycerate de 100.0 1.9E-68 6.6E-73 505.7 30.7 308 7-317 2-333 (352)
12 3jtm_A Formate dehydrogenase, 100.0 8.5E-69 2.9E-73 507.7 27.8 295 17-311 29-333 (351)
13 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.9E-67 6.4E-72 495.9 36.0 311 7-317 23-333 (333)
14 4hy3_A Phosphoglycerate oxidor 100.0 3.6E-68 1.2E-72 504.9 29.7 306 7-317 27-348 (365)
15 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 8.7E-67 3E-71 491.6 33.4 307 4-314 23-334 (335)
16 1dxy_A D-2-hydroxyisocaproate 100.0 5.6E-67 1.9E-71 493.1 27.7 308 8-317 1-329 (333)
17 2cuk_A Glycerate dehydrogenase 100.0 7.3E-66 2.5E-70 481.3 35.0 307 8-317 1-311 (311)
18 1xdw_A NAD+-dependent (R)-2-hy 100.0 2.2E-66 7.6E-71 488.8 31.4 309 8-317 1-331 (331)
19 1j4a_A D-LDH, D-lactate dehydr 100.0 3.7E-66 1.3E-70 487.7 30.1 307 8-317 2-331 (333)
20 3pp8_A Glyoxylate/hydroxypyruv 100.0 4.8E-66 1.6E-70 482.7 29.2 298 5-317 1-310 (315)
21 1wwk_A Phosphoglycerate dehydr 100.0 6.4E-65 2.2E-69 474.3 33.8 300 6-309 2-307 (307)
22 1gdh_A D-glycerate dehydrogena 100.0 1.8E-64 6E-69 473.8 35.6 307 8-315 2-317 (320)
23 2ekl_A D-3-phosphoglycerate de 100.0 7.3E-65 2.5E-69 475.1 32.9 302 6-313 4-313 (313)
24 2nac_A NAD-dependent formate d 100.0 2.4E-65 8.3E-70 489.8 29.6 295 22-316 61-365 (393)
25 2j6i_A Formate dehydrogenase; 100.0 1.3E-65 4.5E-70 488.9 27.3 307 6-312 16-340 (364)
26 1mx3_A CTBP1, C-terminal bindi 100.0 8.9E-64 3E-68 473.1 32.2 312 5-317 19-346 (347)
27 2d0i_A Dehydrogenase; structur 100.0 8.5E-63 2.9E-67 464.8 31.7 308 6-317 1-318 (333)
28 1qp8_A Formate dehydrogenase; 100.0 4.7E-63 1.6E-67 460.7 29.4 291 8-317 1-296 (303)
29 2w2k_A D-mandelate dehydrogena 100.0 1.1E-62 3.8E-67 466.6 31.4 309 7-317 3-338 (348)
30 2dbq_A Glyoxylate reductase; D 100.0 2.6E-62 8.9E-67 461.8 33.5 310 7-317 2-322 (334)
31 2gcg_A Glyoxylate reductase/hy 100.0 4.5E-62 1.5E-66 459.5 34.0 313 4-317 5-329 (330)
32 3oet_A Erythronate-4-phosphate 100.0 7.9E-62 2.7E-66 462.4 27.2 280 6-311 2-285 (381)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 2.2E-60 7.4E-65 473.5 32.7 309 5-317 2-314 (529)
34 3gvx_A Glycerate dehydrogenase 100.0 1.1E-60 3.8E-65 441.2 27.1 279 9-311 2-284 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 6.7E-59 2.3E-63 443.1 28.1 279 8-312 1-283 (380)
36 3d64_A Adenosylhomocysteinase; 100.0 2.6E-37 9.1E-42 302.4 1.0 222 70-316 212-445 (494)
37 1v8b_A Adenosylhomocysteinase; 100.0 6.3E-37 2.2E-41 298.7 3.1 225 69-316 191-430 (479)
38 3d4o_A Dipicolinate synthase s 100.0 2.6E-29 9E-34 232.3 13.7 205 5-239 3-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 1.2E-26 4E-31 215.1 11.3 211 5-239 5-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 2.1E-26 7.2E-31 225.9 1.9 224 70-316 209-445 (494)
41 2vhw_A Alanine dehydrogenase; 99.9 2.2E-23 7.7E-28 199.1 15.1 244 15-290 17-307 (377)
42 1gtm_A Glutamate dehydrogenase 99.8 7.6E-22 2.6E-26 190.2 0.2 154 143-307 206-385 (419)
43 2eez_A Alanine dehydrogenase; 99.8 5E-20 1.7E-24 175.4 10.5 272 15-315 17-339 (369)
44 1x13_A NAD(P) transhydrogenase 99.8 9.2E-19 3.1E-23 168.3 11.3 219 15-242 24-301 (401)
45 3h9u_A Adenosylhomocysteinase; 99.7 1.4E-17 4.7E-22 160.0 10.5 153 76-248 153-312 (436)
46 1l7d_A Nicotinamide nucleotide 99.7 1.1E-16 3.8E-21 153.0 14.5 221 15-240 17-301 (384)
47 3n58_A Adenosylhomocysteinase; 99.7 9.4E-17 3.2E-21 154.2 9.4 152 76-247 189-347 (464)
48 1gpj_A Glutamyl-tRNA reductase 99.7 8.1E-18 2.8E-22 161.9 -0.2 207 70-310 80-325 (404)
49 3gvp_A Adenosylhomocysteinase 99.6 1.3E-15 4.4E-20 146.1 9.6 151 76-246 162-319 (435)
50 4gbj_A 6-phosphogluconate dehy 99.4 4.7E-13 1.6E-17 123.6 10.2 111 149-261 6-121 (297)
51 3obb_A Probable 3-hydroxyisobu 99.4 1.8E-13 6.2E-18 126.5 7.3 111 149-261 4-121 (300)
52 3l6d_A Putative oxidoreductase 99.3 1E-12 3.5E-17 121.6 7.0 116 144-261 5-125 (306)
53 3p2y_A Alanine dehydrogenase/p 99.3 8.7E-11 3E-15 111.4 20.0 227 2-240 17-309 (381)
54 3ggo_A Prephenate dehydrogenas 99.3 1.1E-11 3.9E-16 115.1 13.3 162 130-296 15-190 (314)
55 3doj_A AT3G25530, dehydrogenas 99.3 4E-12 1.4E-16 117.8 9.9 116 143-260 16-138 (310)
56 4dll_A 2-hydroxy-3-oxopropiona 99.3 2.9E-12 1E-16 119.2 8.2 115 145-261 28-148 (320)
57 3qsg_A NAD-binding phosphogluc 99.3 6.4E-12 2.2E-16 116.6 10.0 135 128-266 3-150 (312)
58 3qha_A Putative oxidoreductase 99.3 6.8E-12 2.3E-16 115.4 8.9 109 148-260 15-128 (296)
59 3pef_A 6-phosphogluconate dehy 99.3 1.3E-11 4.5E-16 112.8 9.2 110 149-260 2-118 (287)
60 4e21_A 6-phosphogluconate dehy 99.2 1.1E-11 3.8E-16 117.2 8.7 116 146-263 20-143 (358)
61 3pdu_A 3-hydroxyisobutyrate de 99.2 1.3E-11 4.3E-16 112.9 7.3 110 149-260 2-118 (287)
62 2g5c_A Prephenate dehydrogenas 99.2 6E-11 2E-15 107.8 11.6 141 149-294 2-156 (281)
63 4dio_A NAD(P) transhydrogenase 99.2 1.4E-10 4.8E-15 110.8 14.5 223 6-241 24-320 (405)
64 3g0o_A 3-hydroxyisobutyrate de 99.2 1.5E-11 5.2E-16 113.4 7.0 111 148-260 7-125 (303)
65 4e12_A Diketoreductase; oxidor 99.2 1E-10 3.4E-15 106.9 12.2 136 149-295 5-170 (283)
66 1c1d_A L-phenylalanine dehydro 99.2 3.7E-11 1.3E-15 113.1 9.0 103 145-255 172-280 (355)
67 2h78_A Hibadh, 3-hydroxyisobut 99.2 2.8E-11 9.7E-16 111.2 7.7 110 149-260 4-120 (302)
68 4ezb_A Uncharacterized conserv 99.2 5.4E-11 1.8E-15 110.6 9.0 104 148-255 24-141 (317)
69 2pv7_A T-protein [includes: ch 99.2 1E-10 3.5E-15 107.7 10.0 136 125-284 4-142 (298)
70 4gwg_A 6-phosphogluconate dehy 99.1 1.1E-10 3.6E-15 114.5 7.7 109 148-257 4-125 (484)
71 3b1f_A Putative prephenate deh 99.1 7E-11 2.4E-15 107.9 5.5 135 149-287 7-158 (290)
72 3ond_A Adenosylhomocysteinase; 99.1 2.6E-10 9E-15 111.1 9.6 142 77-238 208-355 (488)
73 2d5c_A AROE, shikimate 5-dehyd 99.1 1.5E-10 5.1E-15 104.6 6.7 163 50-255 54-224 (263)
74 1np3_A Ketol-acid reductoisome 99.1 4.8E-11 1.6E-15 111.9 3.4 131 144-285 12-155 (338)
75 2zyd_A 6-phosphogluconate dehy 99.0 2.9E-10 1E-14 111.5 8.2 109 146-255 13-133 (480)
76 1vpd_A Tartronate semialdehyde 99.0 3.3E-10 1.1E-14 103.7 7.7 107 149-255 6-119 (299)
77 1yb4_A Tartronic semialdehyde 99.0 3.8E-10 1.3E-14 103.0 7.9 106 149-255 4-116 (295)
78 3ktd_A Prephenate dehydrogenas 99.0 2.9E-10 9.9E-15 106.8 6.9 130 149-285 9-154 (341)
79 3dtt_A NADP oxidoreductase; st 99.0 1.5E-10 5.2E-15 103.5 4.5 92 142-236 13-125 (245)
80 3cky_A 2-hydroxymethyl glutara 99.0 4.1E-10 1.4E-14 103.1 7.4 107 149-255 5-118 (301)
81 2hk9_A Shikimate dehydrogenase 99.0 8.3E-10 2.8E-14 100.5 8.4 165 49-255 65-237 (275)
82 2gf2_A Hibadh, 3-hydroxyisobut 99.0 4.2E-10 1.5E-14 102.8 6.4 104 149-252 1-111 (296)
83 2p4q_A 6-phosphogluconate dehy 99.0 1.2E-09 4E-14 107.6 9.7 106 149-255 11-129 (497)
84 2uyy_A N-PAC protein; long-cha 99.0 9.6E-10 3.3E-14 101.6 8.3 107 149-255 31-144 (316)
85 2cvz_A Dehydrogenase, 3-hydrox 99.0 7.9E-10 2.7E-14 100.5 6.9 104 149-255 2-110 (289)
86 2f1k_A Prephenate dehydrogenas 99.0 4.6E-09 1.6E-13 95.1 11.9 139 149-294 1-150 (279)
87 2q3e_A UDP-glucose 6-dehydroge 98.9 1.4E-09 4.9E-14 106.2 7.1 130 149-280 6-181 (467)
88 2dpo_A L-gulonate 3-dehydrogen 98.9 2.8E-09 9.5E-14 99.2 8.5 137 148-295 6-172 (319)
89 3fr7_A Putative ketol-acid red 98.9 1.2E-09 4.2E-14 105.9 6.2 93 143-238 48-157 (525)
90 1zej_A HBD-9, 3-hydroxyacyl-CO 98.9 3.9E-09 1.3E-13 97.0 9.1 134 146-295 10-156 (293)
91 2pgd_A 6-phosphogluconate dehy 98.9 2.6E-09 9E-14 104.7 8.3 106 149-255 3-121 (482)
92 2iz1_A 6-phosphogluconate dehy 98.9 2.3E-09 7.7E-14 105.0 7.8 106 149-255 6-123 (474)
93 2yjz_A Metalloreductase steap4 98.4 2.6E-10 8.8E-15 99.3 0.0 90 146-240 17-110 (201)
94 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 4.7E-09 1.6E-13 102.9 8.6 106 149-255 2-123 (478)
95 2raf_A Putative dinucleotide-b 98.8 5.8E-09 2E-13 91.0 8.0 80 144-239 15-94 (209)
96 3k6j_A Protein F01G10.3, confi 98.8 1.8E-08 6.1E-13 97.9 12.0 176 101-297 12-217 (460)
97 3d1l_A Putative NADP oxidoredu 98.8 2.2E-09 7.5E-14 96.7 4.6 97 143-241 5-108 (266)
98 1i36_A Conserved hypothetical 98.8 3.5E-09 1.2E-13 95.1 5.3 98 149-252 1-105 (264)
99 1leh_A Leucine dehydrogenase; 98.8 6.4E-09 2.2E-13 98.3 6.7 103 145-255 170-279 (364)
100 1pjc_A Protein (L-alanine dehy 98.8 1.1E-07 3.8E-12 89.7 14.5 211 15-236 17-268 (361)
101 3pid_A UDP-glucose 6-dehydroge 98.7 3E-08 1E-12 95.7 9.3 111 141-254 29-172 (432)
102 3oj0_A Glutr, glutamyl-tRNA re 98.7 1.4E-08 4.9E-13 82.9 5.7 85 148-238 21-113 (144)
103 1f0y_A HCDH, L-3-hydroxyacyl-C 98.7 7.9E-08 2.7E-12 88.2 11.1 99 149-249 16-148 (302)
104 1y81_A Conserved hypothetical 98.7 5.7E-08 2E-12 79.4 8.1 104 145-255 11-118 (138)
105 2rcy_A Pyrroline carboxylate r 98.6 2.4E-07 8.2E-12 82.8 12.4 99 148-252 4-106 (262)
106 1mv8_A GMD, GDP-mannose 6-dehy 98.6 8.6E-08 3E-12 92.7 9.9 102 149-251 1-140 (436)
107 2vns_A Metalloreductase steap3 98.6 1.7E-08 6E-13 88.3 4.5 90 147-241 27-121 (215)
108 3c24_A Putative oxidoreductase 98.6 3.3E-08 1.1E-12 90.0 5.3 87 149-238 12-104 (286)
109 3gg2_A Sugar dehydrogenase, UD 98.6 1.4E-07 4.8E-12 91.7 9.7 102 149-251 3-138 (450)
110 2i99_A MU-crystallin homolog; 98.6 4.3E-08 1.5E-12 90.8 5.7 105 147-260 134-248 (312)
111 2ahr_A Putative pyrroline carb 98.6 8.7E-08 3E-12 85.7 7.1 96 149-252 4-105 (259)
112 2izz_A Pyrroline-5-carboxylate 98.6 7.7E-08 2.6E-12 89.3 7.0 102 146-251 20-132 (322)
113 3gt0_A Pyrroline-5-carboxylate 98.6 5.2E-08 1.8E-12 86.9 5.4 99 149-251 3-111 (247)
114 4a7p_A UDP-glucose dehydrogena 98.5 4.2E-07 1.4E-11 88.1 11.3 102 149-251 9-145 (446)
115 2duw_A Putative COA-binding pr 98.5 1.3E-07 4.4E-12 77.9 5.8 102 148-256 13-120 (145)
116 3tri_A Pyrroline-5-carboxylate 98.5 2.1E-07 7E-12 84.8 7.2 106 148-257 3-119 (280)
117 3mog_A Probable 3-hydroxybutyr 98.5 2.9E-07 1E-11 90.2 8.6 134 149-295 6-169 (483)
118 1yqg_A Pyrroline-5-carboxylate 98.5 9E-08 3.1E-12 85.7 4.3 96 149-252 1-103 (263)
119 1b0a_A Protein (fold bifunctio 98.5 3.4E-07 1.2E-11 83.3 8.1 126 143-304 154-280 (288)
120 2dc1_A L-aspartate dehydrogena 98.5 3.8E-07 1.3E-11 80.8 8.2 99 149-255 1-104 (236)
121 3ngx_A Bifunctional protein fo 98.4 4.3E-07 1.5E-11 82.1 8.3 77 146-238 148-225 (276)
122 3p2o_A Bifunctional protein fo 98.4 5.6E-07 1.9E-11 81.8 9.0 111 143-289 155-266 (285)
123 2c2x_A Methylenetetrahydrofola 98.4 5.8E-07 2E-11 81.5 9.0 109 143-289 153-264 (281)
124 3l07_A Bifunctional protein fo 98.4 5.8E-07 2E-11 81.7 9.0 79 144-238 157-236 (285)
125 4a26_A Putative C-1-tetrahydro 98.4 4.5E-07 1.5E-11 83.0 8.1 81 144-240 161-244 (300)
126 4a5o_A Bifunctional protein fo 98.4 7.8E-07 2.7E-11 80.8 9.5 81 143-239 156-237 (286)
127 2o3j_A UDP-glucose 6-dehydroge 98.4 6E-07 2E-11 87.9 9.4 102 149-251 10-151 (481)
128 3dfu_A Uncharacterized protein 98.4 8.9E-07 3.1E-11 78.4 9.6 70 148-235 6-75 (232)
129 1a4i_A Methylenetetrahydrofola 98.4 8.7E-07 3E-11 81.1 9.6 135 143-308 160-296 (301)
130 1dlj_A UDP-glucose dehydrogena 98.4 1.1E-06 3.9E-11 84.0 10.2 101 149-252 1-134 (402)
131 1wdk_A Fatty oxidation complex 98.4 6.7E-07 2.3E-11 91.6 9.0 135 149-295 315-478 (715)
132 1edz_A 5,10-methylenetetrahydr 98.4 5.1E-07 1.7E-11 83.6 7.2 89 142-237 171-277 (320)
133 1jay_A Coenzyme F420H2:NADP+ o 98.4 1.8E-07 6.1E-12 81.0 3.8 112 149-267 1-137 (212)
134 1bg6_A N-(1-D-carboxylethyl)-L 98.4 5.5E-07 1.9E-11 84.0 7.1 100 149-251 5-124 (359)
135 4huj_A Uncharacterized protein 98.4 4E-07 1.4E-11 79.8 5.8 87 148-238 23-116 (220)
136 1x0v_A GPD-C, GPDH-C, glycerol 98.4 6.3E-07 2.2E-11 83.7 7.4 90 148-239 8-128 (354)
137 3don_A Shikimate dehydrogenase 98.4 8E-07 2.7E-11 80.9 7.8 106 145-255 114-228 (277)
138 1zcj_A Peroxisomal bifunctiona 98.3 1.3E-06 4.4E-11 85.2 9.6 111 148-262 37-174 (463)
139 2y0c_A BCEC, UDP-glucose dehyd 98.3 1.1E-06 3.6E-11 86.1 8.9 102 148-250 8-143 (478)
140 1ks9_A KPA reductase;, 2-dehyd 98.3 6.2E-07 2.1E-11 81.0 6.7 88 149-238 1-100 (291)
141 3g79_A NDP-N-acetyl-D-galactos 98.3 1.2E-06 4E-11 85.7 9.0 98 149-247 19-159 (478)
142 1yj8_A Glycerol-3-phosphate de 98.3 4.9E-07 1.7E-11 85.4 5.5 88 149-238 22-144 (375)
143 1txg_A Glycerol-3-phosphate de 98.3 6.5E-07 2.2E-11 82.7 5.9 100 149-251 1-124 (335)
144 3ojo_A CAP5O; rossmann fold, c 98.3 1.7E-06 5.7E-11 83.5 8.4 104 146-249 9-143 (431)
145 3k96_A Glycerol-3-phosphate de 98.3 8.7E-07 3E-11 83.5 6.3 92 148-241 29-139 (356)
146 1evy_A Glycerol-3-phosphate de 98.3 2.1E-07 7.2E-12 87.6 1.9 90 150-240 17-129 (366)
147 2wtb_A MFP2, fatty acid multif 98.3 1.7E-06 5.7E-11 88.8 8.6 135 149-295 313-476 (725)
148 2ew2_A 2-dehydropantoate 2-red 98.2 6.7E-07 2.3E-11 81.6 4.8 104 149-255 4-127 (316)
149 2egg_A AROE, shikimate 5-dehyd 98.2 1.7E-06 5.7E-11 79.5 7.5 106 145-255 138-258 (297)
150 3u62_A Shikimate dehydrogenase 98.2 1.9E-06 6.6E-11 77.4 7.0 99 146-252 107-214 (253)
151 1z82_A Glycerol-3-phosphate de 98.2 9.4E-07 3.2E-11 82.2 5.2 83 149-238 15-114 (335)
152 3phh_A Shikimate dehydrogenase 98.1 2.8E-06 9.7E-11 76.9 5.8 104 148-255 118-226 (269)
153 2qrj_A Saccharopine dehydrogen 98.1 2.8E-06 9.5E-11 80.7 5.7 83 147-235 213-300 (394)
154 1iuk_A Hypothetical protein TT 98.1 1.5E-05 5.2E-10 65.0 8.6 102 147-255 12-119 (140)
155 1vl6_A Malate oxidoreductase; 98.0 1.8E-05 6.2E-10 74.8 9.6 92 143-239 187-298 (388)
156 2d59_A Hypothetical protein PH 98.0 2.6E-05 8.8E-10 63.8 9.2 104 145-255 18-126 (144)
157 2g1u_A Hypothetical protein TM 98.0 2.4E-05 8.2E-10 64.3 8.6 95 142-238 13-121 (155)
158 2i76_A Hypothetical protein; N 98.0 1.2E-06 4.1E-11 79.4 0.4 82 149-238 3-92 (276)
159 3hdj_A Probable ornithine cycl 98.0 3.4E-05 1.2E-09 71.3 10.0 83 147-237 120-215 (313)
160 3c85_A Putative glutathione-re 97.9 3.9E-06 1.3E-10 70.9 3.2 90 144-235 35-139 (183)
161 3ulk_A Ketol-acid reductoisome 97.9 6.6E-06 2.3E-10 78.7 4.8 91 144-238 33-134 (491)
162 1x7d_A Ornithine cyclodeaminas 97.9 2.2E-05 7.5E-10 73.7 7.6 87 147-237 128-228 (350)
163 3i83_A 2-dehydropantoate 2-red 97.8 5E-05 1.7E-09 70.0 8.7 104 149-255 3-124 (320)
164 3vtf_A UDP-glucose 6-dehydroge 97.8 5.1E-05 1.8E-09 73.3 8.9 133 147-280 20-194 (444)
165 2z2v_A Hypothetical protein PH 97.8 1.6E-05 5.5E-10 75.0 5.2 113 145-266 13-136 (365)
166 2qyt_A 2-dehydropantoate 2-red 97.8 9.3E-06 3.2E-10 74.2 3.3 100 149-253 9-134 (317)
167 3hwr_A 2-dehydropantoate 2-red 97.8 1.9E-05 6.5E-10 72.9 5.0 100 146-250 17-134 (318)
168 3ghy_A Ketopantoate reductase 97.8 2.2E-05 7.5E-10 72.9 5.2 87 148-237 3-106 (335)
169 1omo_A Alanine dehydrogenase; 97.8 5.5E-05 1.9E-09 70.1 7.9 82 147-236 124-218 (322)
170 4b4u_A Bifunctional protein fo 97.7 9.4E-05 3.2E-09 67.5 8.9 79 143-237 174-253 (303)
171 3fwz_A Inner membrane protein 97.7 1.9E-05 6.5E-10 63.9 3.7 84 149-234 8-104 (140)
172 3hn2_A 2-dehydropantoate 2-red 97.7 8.8E-05 3E-09 68.1 8.2 105 149-257 3-124 (312)
173 1lss_A TRK system potassium up 97.7 4.9E-05 1.7E-09 60.4 5.7 85 148-234 4-102 (140)
174 3o8q_A Shikimate 5-dehydrogena 97.7 2E-05 7E-10 71.7 3.7 103 145-252 123-236 (281)
175 1p77_A Shikimate 5-dehydrogena 97.6 2.5E-05 8.5E-10 70.6 3.7 96 145-243 116-222 (272)
176 3ado_A Lambda-crystallin; L-gu 97.6 5.4E-05 1.8E-09 70.1 6.0 100 148-249 6-135 (319)
177 1nyt_A Shikimate 5-dehydrogena 97.6 6.7E-05 2.3E-09 67.7 6.3 90 145-238 116-217 (271)
178 2a9f_A Putative malic enzyme ( 97.6 9.6E-05 3.3E-09 70.0 7.2 154 94-285 156-329 (398)
179 3ic5_A Putative saccharopine d 97.6 3.5E-05 1.2E-09 59.4 3.5 84 147-235 4-100 (118)
180 2hmt_A YUAA protein; RCK, KTN, 97.6 6E-05 2E-09 60.1 4.9 91 146-238 4-107 (144)
181 3pwz_A Shikimate dehydrogenase 97.6 7.9E-05 2.7E-09 67.5 6.2 105 144-252 116-231 (272)
182 2ewd_A Lactate dehydrogenase,; 97.5 6.8E-05 2.3E-09 69.2 5.2 101 148-249 4-135 (317)
183 3llv_A Exopolyphosphatase-rela 97.5 5.1E-05 1.8E-09 61.0 3.6 85 147-233 5-102 (141)
184 1j5p_A Aspartate dehydrogenase 97.5 0.0003 1E-08 62.9 8.6 101 146-255 10-114 (253)
185 2dvm_A Malic enzyme, 439AA lon 97.5 0.00024 8.2E-09 68.5 8.6 106 143-253 181-312 (439)
186 3c7a_A Octopine dehydrogenase; 97.5 5.7E-05 2E-09 71.8 4.2 84 149-234 3-115 (404)
187 3jyo_A Quinate/shikimate dehyd 97.5 0.00031 1.1E-08 63.9 8.6 104 145-252 124-245 (283)
188 3tnl_A Shikimate dehydrogenase 97.4 0.00054 1.9E-08 63.2 9.3 93 144-238 150-266 (315)
189 3g17_A Similar to 2-dehydropan 97.4 4.6E-05 1.6E-09 69.5 1.7 91 149-241 3-102 (294)
190 1nvt_A Shikimate 5'-dehydrogen 97.4 7.7E-05 2.6E-09 67.8 3.2 105 145-254 125-247 (287)
191 3fbt_A Chorismate mutase and s 97.3 0.00033 1.1E-08 63.7 6.7 104 145-255 119-232 (282)
192 1pzg_A LDH, lactate dehydrogen 97.3 0.00055 1.9E-08 63.6 8.1 64 148-211 9-92 (331)
193 1tlt_A Putative oxidoreductase 97.3 0.0006 2E-08 62.5 8.3 102 149-255 6-118 (319)
194 1id1_A Putative potassium chan 97.3 0.00046 1.6E-08 56.3 6.6 88 148-237 3-107 (153)
195 1hyh_A L-hicdh, L-2-hydroxyiso 97.3 0.00022 7.4E-09 65.5 4.9 62 149-211 2-81 (309)
196 3uuw_A Putative oxidoreductase 97.3 0.00032 1.1E-08 64.0 6.0 103 148-255 6-119 (308)
197 4hkt_A Inositol 2-dehydrogenas 97.3 0.00056 1.9E-08 63.0 7.7 63 149-212 4-76 (331)
198 3qy9_A DHPR, dihydrodipicolina 97.2 0.00079 2.7E-08 59.9 7.9 81 149-237 4-85 (243)
199 1a5z_A L-lactate dehydrogenase 97.2 0.00033 1.1E-08 64.6 5.6 88 149-238 1-119 (319)
200 3c1a_A Putative oxidoreductase 97.2 0.00025 8.6E-09 65.0 4.6 102 149-255 11-122 (315)
201 3t4e_A Quinate/shikimate dehyd 97.2 0.00087 3E-08 61.8 8.2 91 145-238 145-260 (312)
202 2ho3_A Oxidoreductase, GFO/IDH 97.2 0.00065 2.2E-08 62.4 7.2 63 149-211 2-74 (325)
203 1guz_A Malate dehydrogenase; o 97.2 0.00084 2.9E-08 61.7 7.7 60 149-209 1-79 (310)
204 1f06_A MESO-diaminopimelate D- 97.2 0.0013 4.6E-08 60.5 9.0 100 149-253 4-110 (320)
205 2hjr_A Malate dehydrogenase; m 97.1 0.001 3.4E-08 61.7 8.1 87 149-236 15-132 (328)
206 3dfz_A SIRC, precorrin-2 dehyd 97.1 0.0011 3.6E-08 58.2 7.8 90 140-235 23-121 (223)
207 2glx_A 1,5-anhydro-D-fructose 97.1 0.00055 1.9E-08 62.9 6.2 102 149-255 1-115 (332)
208 1t2d_A LDH-P, L-lactate dehydr 97.1 0.0016 5.4E-08 60.2 8.7 58 149-207 5-80 (322)
209 3euw_A MYO-inositol dehydrogen 97.1 0.00046 1.6E-08 64.0 5.0 64 149-212 5-78 (344)
210 3bio_A Oxidoreductase, GFO/IDH 97.0 0.0012 4E-08 60.5 7.5 100 149-254 10-118 (304)
211 4fgw_A Glycerol-3-phosphate de 97.0 0.00085 2.9E-08 63.7 6.7 88 149-238 35-154 (391)
212 2i6u_A Otcase, ornithine carba 97.0 0.014 4.6E-07 53.6 14.4 91 145-235 145-265 (307)
213 3cea_A MYO-inositol 2-dehydrog 97.0 0.0011 3.8E-08 61.2 7.2 102 149-255 9-125 (346)
214 2ef0_A Ornithine carbamoyltran 97.0 0.0085 2.9E-07 54.8 12.9 98 145-242 151-271 (301)
215 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0012 4.1E-08 60.6 7.3 102 149-255 3-116 (323)
216 3db2_A Putative NADPH-dependen 97.0 0.00059 2E-08 63.5 5.2 64 149-212 6-79 (354)
217 3e9m_A Oxidoreductase, GFO/IDH 97.0 0.00098 3.4E-08 61.5 6.6 64 149-212 6-80 (330)
218 3q2o_A Phosphoribosylaminoimid 97.0 0.00079 2.7E-08 63.5 5.9 61 145-205 11-81 (389)
219 3ego_A Probable 2-dehydropanto 97.0 0.00055 1.9E-08 62.7 4.5 101 149-255 3-118 (307)
220 2v6b_A L-LDH, L-lactate dehydr 97.0 0.00087 3E-08 61.4 5.8 108 149-257 1-138 (304)
221 3l4b_C TRKA K+ channel protien 97.0 0.00056 1.9E-08 59.2 4.2 83 149-233 1-97 (218)
222 3q2i_A Dehydrogenase; rossmann 96.9 0.00051 1.7E-08 64.0 4.1 64 148-211 13-87 (354)
223 2nu8_A Succinyl-COA ligase [AD 96.9 0.0021 7.2E-08 58.5 8.1 103 148-255 7-117 (288)
224 1jw9_B Molybdopterin biosynthe 96.9 0.00064 2.2E-08 60.5 4.5 87 144-234 27-152 (249)
225 2p2s_A Putative oxidoreductase 96.9 0.0024 8.3E-08 58.8 8.2 64 149-212 5-79 (336)
226 3r7f_A Aspartate carbamoyltran 96.9 0.013 4.3E-07 53.7 12.8 91 145-235 144-250 (304)
227 3ff4_A Uncharacterized protein 96.9 0.0018 6.1E-08 51.4 6.2 99 149-255 5-107 (122)
228 3e82_A Putative oxidoreductase 96.9 0.0023 7.7E-08 59.9 8.0 64 149-212 8-80 (364)
229 3rc1_A Sugar 3-ketoreductase; 96.9 0.0009 3.1E-08 62.4 5.2 66 147-212 26-102 (350)
230 3fef_A Putative glucosidase LP 96.8 0.00086 2.9E-08 64.9 4.9 100 147-247 4-158 (450)
231 3e18_A Oxidoreductase; dehydro 96.8 0.001 3.4E-08 62.2 5.2 64 149-212 6-78 (359)
232 3zwc_A Peroxisomal bifunctiona 96.8 0.0039 1.3E-07 63.9 9.9 110 149-262 317-453 (742)
233 1npy_A Hypothetical shikimate 96.8 0.0033 1.1E-07 56.7 8.1 102 147-255 118-231 (271)
234 1dxh_A Ornithine carbamoyltran 96.8 0.011 3.7E-07 54.8 11.8 92 145-236 152-275 (335)
235 1oi7_A Succinyl-COA synthetase 96.8 0.0025 8.4E-08 58.0 7.2 103 148-255 7-117 (288)
236 3ezy_A Dehydrogenase; structur 96.8 0.0011 3.9E-08 61.3 4.9 64 149-212 3-77 (344)
237 2i6t_A Ubiquitin-conjugating e 96.8 0.002 6.9E-08 59.0 6.4 87 148-236 14-126 (303)
238 1lld_A L-lactate dehydrogenase 96.7 0.0014 4.8E-08 59.9 5.4 91 147-238 6-127 (319)
239 2aef_A Calcium-gated potassium 96.7 0.0012 4E-08 57.7 4.3 84 148-234 9-105 (234)
240 2axq_A Saccharopine dehydrogen 96.7 0.0011 3.7E-08 64.5 4.4 89 142-235 17-119 (467)
241 1zud_1 Adenylyltransferase THI 96.7 0.0019 6.6E-08 57.4 5.7 87 144-234 24-149 (251)
242 3orq_A N5-carboxyaminoimidazol 96.7 0.0018 6.1E-08 60.9 5.6 61 145-205 9-79 (377)
243 4f2g_A Otcase 1, ornithine car 96.6 0.025 8.4E-07 51.9 12.9 91 145-235 151-264 (309)
244 3tum_A Shikimate dehydrogenase 96.6 0.0028 9.5E-08 57.2 6.4 92 145-236 122-226 (269)
245 3l9w_A Glutathione-regulated p 96.6 0.0012 4.2E-08 63.1 4.2 85 148-234 4-101 (413)
246 3evn_A Oxidoreductase, GFO/IDH 96.6 0.0032 1.1E-07 58.0 6.9 64 149-212 6-80 (329)
247 1ldn_A L-lactate dehydrogenase 96.6 0.0024 8.1E-08 58.8 6.0 93 148-242 6-128 (316)
248 1vlv_A Otcase, ornithine carba 96.6 0.026 9E-07 52.0 12.9 97 145-241 164-294 (325)
249 1duv_G Octase-1, ornithine tra 96.6 0.011 3.9E-07 54.7 10.4 92 145-236 152-275 (333)
250 3qvo_A NMRA family protein; st 96.6 0.0025 8.6E-08 55.4 5.7 92 146-239 21-128 (236)
251 3r6d_A NAD-dependent epimerase 96.6 0.0053 1.8E-07 52.6 7.5 86 149-238 6-110 (221)
252 3f4l_A Putative oxidoreductase 96.6 0.0033 1.1E-07 58.3 6.6 64 149-212 3-78 (345)
253 1ydw_A AX110P-like protein; st 96.6 0.0045 1.6E-07 57.6 7.6 102 149-255 7-124 (362)
254 1ur5_A Malate dehydrogenase; o 96.6 0.0049 1.7E-07 56.5 7.6 92 149-243 3-125 (309)
255 3nep_X Malate dehydrogenase; h 96.6 0.0044 1.5E-07 57.1 7.2 93 149-243 1-124 (314)
256 2vt3_A REX, redox-sensing tran 96.5 0.0018 6.1E-08 56.5 4.3 62 149-210 86-156 (215)
257 3vku_A L-LDH, L-lactate dehydr 96.5 0.0026 8.8E-08 59.0 5.6 96 146-243 7-131 (326)
258 3mz0_A Inositol 2-dehydrogenas 96.5 0.0019 6.5E-08 59.8 4.7 64 149-212 3-79 (344)
259 1pg5_A Aspartate carbamoyltran 96.5 0.014 4.9E-07 53.2 10.4 92 145-236 146-261 (299)
260 1oju_A MDH, malate dehydrogena 96.5 0.006 2E-07 55.6 7.7 93 149-244 1-125 (294)
261 3ec7_A Putative dehydrogenase; 96.5 0.0027 9.2E-08 59.2 5.5 65 148-212 23-100 (357)
262 3abi_A Putative uncharacterize 96.5 0.0015 5.1E-08 61.2 3.7 63 147-210 15-88 (365)
263 3gvi_A Malate dehydrogenase; N 96.5 0.0091 3.1E-07 55.2 8.8 90 146-236 5-125 (324)
264 1yqd_A Sinapyl alcohol dehydro 96.5 0.0033 1.1E-07 58.8 5.9 86 147-237 187-284 (366)
265 1y6j_A L-lactate dehydrogenase 96.5 0.0075 2.6E-07 55.5 8.2 110 148-260 7-152 (318)
266 4a7p_A UDP-glucose dehydrogena 96.5 0.0055 1.9E-07 59.2 7.6 97 144-245 318-430 (446)
267 3g79_A NDP-N-acetyl-D-galactos 96.4 0.0096 3.3E-07 57.9 9.2 96 145-244 350-457 (478)
268 2fp4_A Succinyl-COA ligase [GD 96.4 0.0054 1.9E-07 56.2 7.0 107 144-255 9-125 (305)
269 3m2t_A Probable dehydrogenase; 96.4 0.0022 7.6E-08 59.9 4.4 64 148-211 5-80 (359)
270 4ew6_A D-galactose-1-dehydroge 96.4 0.0039 1.3E-07 57.6 5.9 63 147-210 24-92 (330)
271 3dhn_A NAD-dependent epimerase 96.4 0.005 1.7E-07 52.8 6.2 91 149-239 5-115 (227)
272 1pvv_A Otcase, ornithine carba 96.4 0.023 7.8E-07 52.3 10.9 97 145-241 152-280 (315)
273 1oth_A Protein (ornithine tran 96.4 0.041 1.4E-06 50.7 12.4 92 145-236 152-272 (321)
274 3p7m_A Malate dehydrogenase; p 96.3 0.013 4.4E-07 54.1 8.9 94 147-243 4-128 (321)
275 3do5_A HOM, homoserine dehydro 96.3 0.0089 3.1E-07 55.3 7.9 106 149-255 3-136 (327)
276 3ldh_A Lactate dehydrogenase; 96.3 0.0022 7.5E-08 59.5 3.7 93 147-242 20-143 (330)
277 1obb_A Maltase, alpha-glucosid 96.3 0.004 1.4E-07 60.6 5.7 110 148-258 3-174 (480)
278 1ff9_A Saccharopine reductase; 96.3 0.0025 8.6E-08 61.6 4.2 64 147-210 2-79 (450)
279 3e8x_A Putative NAD-dependent 96.3 0.0045 1.5E-07 53.6 5.4 68 143-210 16-95 (236)
280 2we8_A Xanthine dehydrogenase; 96.2 0.017 5.9E-07 54.6 9.5 94 147-255 203-299 (386)
281 3fhl_A Putative oxidoreductase 96.2 0.004 1.4E-07 58.1 5.2 64 149-212 6-78 (362)
282 3kux_A Putative oxidoreductase 96.2 0.0046 1.6E-07 57.4 5.5 64 149-212 8-80 (352)
283 1ml4_A Aspartate transcarbamoy 96.2 0.011 3.9E-07 54.1 7.9 92 145-236 152-269 (308)
284 1h6d_A Precursor form of gluco 96.2 0.0045 1.5E-07 59.4 5.5 103 148-255 83-203 (433)
285 3pqe_A L-LDH, L-lactate dehydr 96.2 0.0051 1.8E-07 56.9 5.7 95 147-243 4-128 (326)
286 3two_A Mannitol dehydrogenase; 96.2 0.0076 2.6E-07 55.7 6.9 87 147-238 176-268 (348)
287 3o9z_A Lipopolysaccaride biosy 96.2 0.0085 2.9E-07 54.8 7.1 63 149-211 4-84 (312)
288 3ojo_A CAP5O; rossmann fold, c 96.2 0.016 5.6E-07 55.6 9.3 87 146-239 313-410 (431)
289 3gdo_A Uncharacterized oxidore 96.2 0.0039 1.3E-07 58.1 4.7 64 149-212 6-78 (358)
290 4a8t_A Putrescine carbamoyltra 96.2 0.073 2.5E-06 49.4 13.1 90 145-235 172-292 (339)
291 3nv9_A Malic enzyme; rossmann 96.1 0.062 2.1E-06 51.6 12.8 157 94-285 187-367 (487)
292 1pjq_A CYSG, siroheme synthase 96.1 0.0058 2E-07 59.1 5.9 42 140-181 4-45 (457)
293 3ohs_X Trans-1,2-dihydrobenzen 96.1 0.0039 1.3E-07 57.4 4.4 64 149-212 3-79 (334)
294 2rir_A Dipicolinate synthase, 96.1 0.027 9.4E-07 51.0 10.0 106 145-255 4-121 (300)
295 3oa2_A WBPB; oxidoreductase, s 96.1 0.0092 3.1E-07 54.8 6.8 63 149-211 4-85 (318)
296 1kyq_A Met8P, siroheme biosynt 96.1 0.0037 1.3E-07 56.5 3.8 42 140-181 5-46 (274)
297 4ep1_A Otcase, ornithine carba 96.1 0.03 1E-06 51.9 10.0 96 146-241 177-303 (340)
298 2w37_A Ornithine carbamoyltran 96.1 0.027 9.3E-07 52.6 9.7 92 145-236 173-296 (359)
299 1xyg_A Putative N-acetyl-gamma 96.1 0.016 5.6E-07 54.2 8.3 83 147-236 15-113 (359)
300 4e4t_A Phosphoribosylaminoimid 96.0 0.0058 2E-07 58.4 5.2 62 144-205 31-102 (419)
301 4fcc_A Glutamate dehydrogenase 96.0 0.007 2.4E-07 58.2 5.7 105 143-255 230-368 (450)
302 3tl2_A Malate dehydrogenase; c 96.0 0.022 7.4E-07 52.4 8.8 96 147-244 7-134 (315)
303 2yfq_A Padgh, NAD-GDH, NAD-spe 96.0 0.028 9.5E-07 53.7 9.8 105 143-255 207-340 (421)
304 3ew7_A LMO0794 protein; Q8Y8U8 96.0 0.016 5.4E-07 49.1 7.4 88 149-237 1-104 (221)
305 3k92_A NAD-GDH, NAD-specific g 96.0 0.029 9.8E-07 53.6 9.7 105 143-255 216-343 (424)
306 3grf_A Ornithine carbamoyltran 96.0 0.032 1.1E-06 51.6 9.7 92 144-235 157-283 (328)
307 2dt5_A AT-rich DNA-binding pro 96.0 0.0048 1.6E-07 53.6 3.8 61 149-210 81-151 (211)
308 3csu_A Protein (aspartate carb 95.9 0.03 1E-06 51.4 9.3 92 145-236 151-268 (310)
309 4a8p_A Putrescine carbamoyltra 95.9 0.089 3E-06 49.0 12.6 96 145-241 150-279 (355)
310 1u8x_X Maltose-6'-phosphate gl 95.9 0.0057 1.9E-07 59.5 4.6 110 148-257 28-193 (472)
311 4f3y_A DHPR, dihydrodipicolina 95.9 0.015 5E-07 52.5 6.9 60 149-208 8-82 (272)
312 3d0o_A L-LDH 1, L-lactate dehy 95.9 0.011 3.7E-07 54.4 6.1 109 147-257 5-147 (317)
313 2ozp_A N-acetyl-gamma-glutamyl 95.9 0.034 1.2E-06 51.7 9.5 82 149-236 5-100 (345)
314 4amu_A Ornithine carbamoyltran 95.9 0.03 1E-06 52.4 9.0 91 146-236 178-301 (365)
315 4fb5_A Probable oxidoreductase 95.8 0.011 3.6E-07 55.1 6.0 65 147-211 24-106 (393)
316 2tmg_A Protein (glutamate dehy 95.8 0.062 2.1E-06 51.2 11.3 105 143-255 204-333 (415)
317 1hdo_A Biliverdin IX beta redu 95.8 0.012 4.2E-07 49.1 5.9 63 148-210 3-78 (206)
318 3gpi_A NAD-dependent epimerase 95.8 0.0091 3.1E-07 53.1 5.3 93 147-239 2-112 (286)
319 3dqp_A Oxidoreductase YLBE; al 95.8 0.0098 3.4E-07 50.8 5.3 63 149-211 1-75 (219)
320 2nqt_A N-acetyl-gamma-glutamyl 95.8 0.025 8.4E-07 52.9 8.2 86 149-241 10-116 (352)
321 3h2s_A Putative NADH-flavin re 95.8 0.015 5E-07 49.6 6.2 88 149-237 1-106 (224)
322 3i23_A Oxidoreductase, GFO/IDH 95.8 0.007 2.4E-07 56.1 4.4 64 149-212 3-78 (349)
323 1lc0_A Biliverdin reductase A; 95.7 0.012 4.1E-07 53.3 5.8 101 149-255 8-118 (294)
324 3aog_A Glutamate dehydrogenase 95.7 0.054 1.9E-06 52.0 10.5 105 143-255 230-358 (440)
325 2ejw_A HDH, homoserine dehydro 95.7 0.013 4.3E-07 54.4 6.0 99 149-252 4-116 (332)
326 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0099 3.4E-07 57.3 5.5 110 145-254 6-139 (451)
327 1xgk_A Nitrogen metabolite rep 95.7 0.0072 2.5E-07 56.1 4.3 92 147-238 4-115 (352)
328 1piw_A Hypothetical zinc-type 95.7 0.01 3.4E-07 55.2 5.0 88 147-237 179-278 (360)
329 3gd5_A Otcase, ornithine carba 95.7 0.055 1.9E-06 49.9 9.9 97 145-241 154-282 (323)
330 3ijp_A DHPR, dihydrodipicolina 95.7 0.031 1.1E-06 50.7 8.1 84 149-237 22-121 (288)
331 2yv1_A Succinyl-COA ligase [AD 95.7 0.014 4.8E-07 53.1 5.9 103 149-255 14-123 (294)
332 4had_A Probable oxidoreductase 95.6 0.0095 3.3E-07 55.0 4.8 63 149-211 24-98 (350)
333 2cdc_A Glucose dehydrogenase g 95.6 0.0061 2.1E-07 56.8 3.4 88 145-236 178-279 (366)
334 1ez4_A Lactate dehydrogenase; 95.6 0.017 5.8E-07 53.1 6.3 108 148-257 5-145 (318)
335 1y1p_A ARII, aldehyde reductas 95.6 0.022 7.6E-07 51.5 7.1 66 144-209 7-93 (342)
336 2d4a_B Malate dehydrogenase; a 95.6 0.013 4.3E-07 53.7 5.3 90 150-242 1-121 (308)
337 2czc_A Glyceraldehyde-3-phosph 95.6 0.014 4.7E-07 54.1 5.6 64 149-212 3-92 (334)
338 3d6n_B Aspartate carbamoyltran 95.6 0.2 6.8E-06 45.4 13.0 65 145-210 143-215 (291)
339 3on5_A BH1974 protein; structu 95.6 0.02 6.9E-07 53.6 6.6 86 148-251 199-286 (362)
340 2ixa_A Alpha-N-acetylgalactosa 95.5 0.0077 2.6E-07 57.9 3.9 63 149-211 21-103 (444)
341 2bka_A CC3, TAT-interacting pr 95.5 0.022 7.6E-07 49.1 6.5 65 146-210 16-95 (242)
342 3tpf_A Otcase, ornithine carba 95.5 0.076 2.6E-06 48.6 10.3 98 145-242 142-272 (307)
343 2yv2_A Succinyl-COA synthetase 95.5 0.024 8.2E-07 51.6 6.9 103 149-255 14-124 (297)
344 3sds_A Ornithine carbamoyltran 95.5 0.082 2.8E-06 49.3 10.5 92 144-235 184-308 (353)
345 2zqz_A L-LDH, L-lactate dehydr 95.5 0.019 6.5E-07 53.0 6.2 93 148-242 9-130 (326)
346 4ina_A Saccharopine dehydrogen 95.5 0.0075 2.6E-07 57.3 3.6 83 149-236 2-108 (405)
347 2nvw_A Galactose/lactose metab 95.5 0.019 6.5E-07 55.8 6.4 64 148-211 39-120 (479)
348 1cdo_A Alcohol dehydrogenase; 95.5 0.038 1.3E-06 51.5 8.2 86 147-237 192-296 (374)
349 3btv_A Galactose/lactose metab 95.4 0.012 4E-07 56.6 4.7 64 148-211 20-101 (438)
350 3ijr_A Oxidoreductase, short c 95.4 0.047 1.6E-06 49.1 8.5 38 144-181 43-81 (291)
351 4aj2_A L-lactate dehydrogenase 95.4 0.019 6.5E-07 53.2 6.0 95 145-242 16-141 (331)
352 2pzm_A Putative nucleotide sug 95.4 0.019 6.6E-07 52.2 6.0 67 143-209 15-98 (330)
353 1b7g_O Protein (glyceraldehyde 95.4 0.033 1.1E-06 51.7 7.6 63 149-211 2-89 (340)
354 3uce_A Dehydrogenase; rossmann 95.4 0.013 4.3E-07 50.4 4.4 91 145-237 3-118 (223)
355 2z1m_A GDP-D-mannose dehydrata 95.4 0.019 6.4E-07 52.1 5.8 36 147-182 2-38 (345)
356 1uuf_A YAHK, zinc-type alcohol 95.4 0.0094 3.2E-07 55.8 3.8 86 147-237 194-290 (369)
357 1rjw_A ADH-HT, alcohol dehydro 95.4 0.0096 3.3E-07 54.9 3.8 86 147-237 164-263 (339)
358 2jhf_A Alcohol dehydrogenase E 95.4 0.04 1.4E-06 51.3 8.1 85 147-236 191-294 (374)
359 1lu9_A Methylene tetrahydromet 95.4 0.0073 2.5E-07 54.4 2.9 37 145-181 116-153 (287)
360 4id9_A Short-chain dehydrogena 95.3 0.015 5E-07 53.2 4.9 67 143-209 14-87 (347)
361 3i6i_A Putative leucoanthocyan 95.3 0.039 1.3E-06 50.5 7.6 35 147-181 9-44 (346)
362 3gg2_A Sugar dehydrogenase, UD 95.3 0.041 1.4E-06 53.1 7.9 91 144-238 314-421 (450)
363 3keo_A Redox-sensing transcrip 95.3 0.015 5E-07 50.5 4.3 63 148-210 84-159 (212)
364 2d8a_A PH0655, probable L-thre 95.2 0.0091 3.1E-07 55.2 3.1 85 147-236 167-268 (348)
365 1ys4_A Aspartate-semialdehyde 95.2 0.02 6.8E-07 53.4 5.5 83 149-236 9-115 (354)
366 3moi_A Probable dehydrogenase; 95.2 0.0083 2.9E-07 56.5 2.9 63 149-211 3-76 (387)
367 1iz0_A Quinone oxidoreductase; 95.2 0.016 5.4E-07 52.4 4.7 83 147-236 125-219 (302)
368 4gqa_A NAD binding oxidoreduct 95.2 0.01 3.5E-07 56.2 3.6 64 149-212 27-109 (412)
369 3aoe_E Glutamate dehydrogenase 95.2 0.12 4.1E-06 49.3 10.9 105 143-255 213-337 (419)
370 1p0f_A NADP-dependent alcohol 95.2 0.044 1.5E-06 51.0 7.9 85 147-236 191-294 (373)
371 2hcy_A Alcohol dehydrogenase 1 95.2 0.02 6.9E-07 52.8 5.5 86 147-237 169-271 (347)
372 1dih_A Dihydrodipicolinate red 95.2 0.0091 3.1E-07 53.8 2.9 60 148-207 5-80 (273)
373 2q3e_A UDP-glucose 6-dehydroge 95.2 0.048 1.6E-06 52.7 8.2 91 145-238 326-445 (467)
374 1e3i_A Alcohol dehydrogenase, 95.2 0.05 1.7E-06 50.7 8.1 85 147-236 195-298 (376)
375 3dty_A Oxidoreductase, GFO/IDH 95.2 0.014 4.9E-07 55.0 4.3 65 148-212 12-98 (398)
376 2cf5_A Atccad5, CAD, cinnamyl 95.1 0.022 7.5E-07 52.9 5.4 85 147-236 180-276 (357)
377 3eag_A UDP-N-acetylmuramate:L- 95.1 0.035 1.2E-06 51.0 6.7 106 148-253 4-134 (326)
378 3c8m_A Homoserine dehydrogenas 95.1 0.024 8.3E-07 52.4 5.6 106 149-255 7-142 (331)
379 1cf2_P Protein (glyceraldehyde 95.1 0.017 5.7E-07 53.7 4.4 63 149-211 2-90 (337)
380 2dq4_A L-threonine 3-dehydroge 95.1 0.015 5.1E-07 53.6 4.1 85 147-236 164-263 (343)
381 2fzw_A Alcohol dehydrogenase c 95.1 0.046 1.6E-06 50.8 7.5 85 147-236 190-293 (373)
382 3k5i_A Phosphoribosyl-aminoimi 95.0 0.023 7.9E-07 53.8 5.4 63 142-205 18-92 (403)
383 1zh8_A Oxidoreductase; TM0312, 95.0 0.014 4.7E-07 54.0 3.7 63 149-211 19-94 (340)
384 1e3j_A NADP(H)-dependent ketos 95.0 0.031 1.1E-06 51.6 6.2 86 147-237 168-273 (352)
385 3cps_A Glyceraldehyde 3-phosph 95.0 0.034 1.2E-06 51.9 6.4 30 149-178 18-48 (354)
386 2xxj_A L-LDH, L-lactate dehydr 95.0 0.026 9E-07 51.7 5.5 93 149-243 1-122 (310)
387 1pl8_A Human sorbitol dehydrog 95.0 0.041 1.4E-06 50.9 6.9 86 147-237 171-275 (356)
388 3u3x_A Oxidoreductase; structu 95.0 0.02 6.9E-07 53.4 4.8 65 147-211 25-100 (361)
389 3fi9_A Malate dehydrogenase; s 95.0 0.023 7.8E-07 52.9 5.1 98 146-246 6-135 (343)
390 4h31_A Otcase, ornithine carba 95.0 0.37 1.3E-05 44.9 13.4 92 144-235 177-300 (358)
391 1zq6_A Otcase, ornithine carba 95.0 0.41 1.4E-05 44.6 13.5 89 146-235 188-315 (359)
392 1s6y_A 6-phospho-beta-glucosid 95.0 0.023 7.9E-07 54.9 5.2 110 148-257 7-174 (450)
393 3uko_A Alcohol dehydrogenase c 95.0 0.044 1.5E-06 51.1 7.1 85 147-236 193-296 (378)
394 1mld_A Malate dehydrogenase; o 95.0 0.063 2.1E-06 49.2 8.0 94 149-244 1-124 (314)
395 2h7i_A Enoyl-[acyl-carrier-pro 95.0 0.021 7.2E-07 50.6 4.6 37 145-181 4-43 (269)
396 1qyc_A Phenylcoumaran benzylic 94.9 0.058 2E-06 48.1 7.5 34 148-181 4-38 (308)
397 1b8p_A Protein (malate dehydro 94.9 0.055 1.9E-06 49.9 7.4 88 148-235 5-133 (329)
398 3ip1_A Alcohol dehydrogenase, 94.9 0.037 1.3E-06 52.2 6.4 87 146-236 212-319 (404)
399 3h5n_A MCCB protein; ubiquitin 94.9 0.037 1.3E-06 51.6 6.2 37 144-180 114-151 (353)
400 3e48_A Putative nucleoside-dip 94.9 0.036 1.2E-06 49.1 5.9 62 149-210 1-76 (289)
401 3oig_A Enoyl-[acyl-carrier-pro 94.8 0.081 2.8E-06 46.5 8.1 37 145-181 4-43 (266)
402 1pqw_A Polyketide synthase; ro 94.8 0.01 3.6E-07 50.0 2.0 35 147-181 38-73 (198)
403 4gx0_A TRKA domain protein; me 94.8 0.053 1.8E-06 53.5 7.4 81 149-231 349-438 (565)
404 1u8f_O GAPDH, glyceraldehyde-3 94.7 0.044 1.5E-06 50.8 6.2 30 149-178 4-35 (335)
405 4gmf_A Yersiniabactin biosynth 94.7 0.019 6.4E-07 54.1 3.7 62 148-210 7-77 (372)
406 3dr3_A N-acetyl-gamma-glutamyl 94.7 0.033 1.1E-06 51.7 5.3 83 149-237 5-108 (337)
407 2csu_A 457AA long hypothetical 94.7 0.074 2.5E-06 51.4 8.0 108 145-255 5-123 (457)
408 3uog_A Alcohol dehydrogenase; 94.7 0.014 4.8E-07 54.3 2.7 36 147-182 189-224 (363)
409 2bma_A Glutamate dehydrogenase 94.7 0.11 3.7E-06 50.2 8.9 105 143-255 247-386 (470)
410 4ekn_B Aspartate carbamoyltran 94.6 0.12 4.2E-06 47.2 8.9 89 145-235 148-263 (306)
411 3orf_A Dihydropteridine reduct 94.6 0.031 1.1E-06 49.0 4.8 93 146-238 20-147 (251)
412 3s2e_A Zinc-containing alcohol 94.6 0.03 1E-06 51.4 4.8 85 147-236 166-264 (340)
413 2gas_A Isoflavone reductase; N 94.6 0.05 1.7E-06 48.6 6.2 34 148-181 2-36 (307)
414 1hdg_O Holo-D-glyceraldehyde-3 94.6 0.025 8.6E-07 52.4 4.2 29 149-177 1-32 (332)
415 3v5n_A Oxidoreductase; structu 94.6 0.024 8.1E-07 54.0 4.2 65 148-212 37-123 (417)
416 4g65_A TRK system potassium up 94.6 0.015 5.2E-07 56.3 2.8 64 148-211 3-80 (461)
417 3m2p_A UDP-N-acetylglucosamine 94.5 0.044 1.5E-06 49.2 5.7 61 148-209 2-72 (311)
418 1ooe_A Dihydropteridine reduct 94.5 0.033 1.1E-06 48.2 4.6 92 147-238 2-132 (236)
419 2y0c_A BCEC, UDP-glucose dehyd 94.5 0.13 4.3E-06 50.0 9.2 94 145-243 325-445 (478)
420 1v9l_A Glutamate dehydrogenase 94.5 0.17 6E-06 48.2 9.9 105 143-255 205-339 (421)
421 3r3s_A Oxidoreductase; structu 94.5 0.11 3.7E-06 46.7 8.1 37 144-180 45-82 (294)
422 1vkn_A N-acetyl-gamma-glutamyl 94.5 0.1 3.4E-06 48.7 8.1 82 148-236 13-108 (351)
423 4eye_A Probable oxidoreductase 94.5 0.025 8.5E-07 52.1 3.9 36 147-182 159-195 (342)
424 2yyy_A Glyceraldehyde-3-phosph 94.5 0.077 2.6E-06 49.3 7.2 83 149-235 3-113 (343)
425 3r3j_A Glutamate dehydrogenase 94.5 0.082 2.8E-06 50.8 7.5 37 143-179 234-271 (456)
426 4ej6_A Putative zinc-binding d 94.4 0.023 7.8E-07 53.1 3.6 85 147-236 182-285 (370)
427 2a35_A Hypothetical protein PA 94.4 0.037 1.3E-06 46.6 4.6 63 147-211 4-77 (215)
428 4h3v_A Oxidoreductase domain p 94.4 0.019 6.3E-07 53.4 2.9 63 149-211 7-87 (390)
429 4gsl_A Ubiquitin-like modifier 94.4 0.061 2.1E-06 53.6 6.7 73 95-180 285-359 (615)
430 2q1s_A Putative nucleotide sug 94.4 0.065 2.2E-06 49.6 6.6 66 145-210 29-110 (377)
431 3e5r_O PP38, glyceraldehyde-3- 94.4 0.054 1.8E-06 50.3 6.0 29 149-177 4-33 (337)
432 3vh1_A Ubiquitin-like modifier 94.4 0.06 2E-06 53.6 6.6 36 144-179 323-359 (598)
433 2zcu_A Uncharacterized oxidore 94.4 0.019 6.6E-07 50.7 2.8 60 150-209 1-75 (286)
434 3nrc_A Enoyl-[acyl-carrier-pro 94.4 0.075 2.6E-06 47.3 6.8 38 144-181 22-62 (280)
435 3pxx_A Carveol dehydrogenase; 94.3 0.14 4.9E-06 45.2 8.6 37 144-180 6-43 (287)
436 3cmc_O GAPDH, glyceraldehyde-3 94.3 0.038 1.3E-06 51.2 4.8 29 149-177 2-31 (334)
437 3rft_A Uronate dehydrogenase; 94.3 0.032 1.1E-06 49.2 4.2 62 147-208 2-73 (267)
438 3m6i_A L-arabinitol 4-dehydrog 94.3 0.071 2.4E-06 49.3 6.7 86 147-237 179-285 (363)
439 1dhr_A Dihydropteridine reduct 94.3 0.053 1.8E-06 47.1 5.5 94 145-238 4-136 (241)
440 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.3 0.053 1.8E-06 48.7 5.6 64 147-210 11-85 (321)
441 2wm3_A NMRA-like family domain 94.2 0.044 1.5E-06 48.9 4.9 61 148-208 5-81 (299)
442 1nvm_B Acetaldehyde dehydrogen 94.2 0.05 1.7E-06 49.9 5.3 61 149-209 5-81 (312)
443 3mw9_A GDH 1, glutamate dehydr 94.2 0.23 7.8E-06 48.2 10.0 101 145-255 241-366 (501)
444 2h6e_A ADH-4, D-arabinose 1-de 94.2 0.027 9.1E-07 51.9 3.4 85 147-236 170-270 (344)
445 1js1_X Transcarbamylase; alpha 94.1 0.19 6.5E-06 46.2 9.0 89 145-235 166-275 (324)
446 2dkn_A 3-alpha-hydroxysteroid 94.1 0.059 2E-06 46.5 5.4 61 149-209 2-72 (255)
447 2r6j_A Eugenol synthase 1; phe 94.1 0.09 3.1E-06 47.3 6.8 60 149-208 12-88 (318)
448 2wyu_A Enoyl-[acyl carrier pro 94.1 0.029 1E-06 49.4 3.4 37 145-181 5-44 (261)
449 4h15_A Short chain alcohol deh 94.0 0.092 3.1E-06 46.7 6.6 38 145-182 8-46 (261)
450 1lnq_A MTHK channels, potassiu 94.0 0.021 7.1E-07 52.5 2.3 81 148-231 115-207 (336)
451 2x0j_A Malate dehydrogenase; o 94.0 0.047 1.6E-06 49.7 4.6 87 149-235 1-118 (294)
452 2dtx_A Glucose 1-dehydrogenase 94.0 0.13 4.3E-06 45.5 7.4 64 145-208 5-83 (264)
453 3npg_A Uncharacterized DUF364 94.0 0.23 8E-06 43.9 9.0 102 146-254 114-235 (249)
454 1xq6_A Unknown protein; struct 94.0 0.048 1.6E-06 46.9 4.5 64 146-209 2-79 (253)
455 3c1o_A Eugenol synthase; pheny 94.0 0.075 2.6E-06 47.8 6.0 61 148-208 4-86 (321)
456 2o3j_A UDP-glucose 6-dehydroge 94.0 0.13 4.5E-06 49.8 8.0 97 145-245 332-455 (481)
457 3fpc_A NADP-dependent alcohol 93.9 0.042 1.4E-06 50.7 4.3 36 147-182 166-202 (352)
458 2r00_A Aspartate-semialdehyde 93.9 0.041 1.4E-06 51.0 4.1 83 149-236 4-97 (336)
459 2c5a_A GDP-mannose-3', 5'-epim 93.9 0.12 4E-06 48.0 7.3 64 146-209 27-103 (379)
460 3mtj_A Homoserine dehydrogenas 93.9 0.059 2E-06 51.8 5.3 104 148-255 10-131 (444)
461 3ay3_A NAD-dependent epimerase 93.9 0.039 1.3E-06 48.5 3.7 61 149-209 3-73 (267)
462 3oqb_A Oxidoreductase; structu 93.9 0.098 3.3E-06 48.8 6.7 63 149-211 7-95 (383)
463 1rm4_O Glyceraldehyde 3-phosph 93.9 0.11 3.6E-06 48.3 6.8 28 149-176 2-32 (337)
464 1mv8_A GMD, GDP-mannose 6-dehy 93.8 0.067 2.3E-06 51.2 5.6 82 147-234 312-419 (436)
465 1v3u_A Leukotriene B4 12- hydr 93.8 0.025 8.4E-07 51.8 2.4 84 147-236 145-245 (333)
466 3gms_A Putative NADPH:quinone 93.8 0.026 9E-07 51.9 2.6 84 147-236 144-244 (340)
467 3ruf_A WBGU; rossmann fold, UD 93.8 0.072 2.5E-06 48.5 5.5 65 145-209 22-110 (351)
468 3upl_A Oxidoreductase; rossman 93.7 0.056 1.9E-06 52.0 4.8 103 149-255 24-160 (446)
469 1ebf_A Homoserine dehydrogenas 93.7 0.088 3E-06 49.2 6.1 62 149-210 5-95 (358)
470 2x5o_A UDP-N-acetylmuramoylala 93.7 0.061 2.1E-06 51.4 5.1 108 145-252 2-129 (439)
471 2ydy_A Methionine adenosyltran 93.7 0.071 2.4E-06 47.8 5.3 62 148-209 2-70 (315)
472 3b1j_A Glyceraldehyde 3-phosph 93.7 0.051 1.7E-06 50.5 4.3 29 149-177 3-34 (339)
473 2q1w_A Putative nucleotide sug 93.7 0.073 2.5E-06 48.3 5.4 67 143-209 16-99 (333)
474 4ffl_A PYLC; amino acid, biosy 93.7 0.081 2.8E-06 48.9 5.7 58 149-206 2-70 (363)
475 1p9l_A Dihydrodipicolinate red 93.7 0.22 7.5E-06 44.0 8.2 50 149-208 1-54 (245)
476 3hhp_A Malate dehydrogenase; M 93.6 0.21 7.1E-06 45.7 8.2 96 149-246 1-127 (312)
477 3l5o_A Uncharacterized protein 93.6 0.2 6.7E-06 45.0 7.8 88 144-240 137-224 (270)
478 3oh8_A Nucleoside-diphosphate 93.6 0.11 3.7E-06 50.7 6.6 62 148-209 147-211 (516)
479 1f8f_A Benzyl alcohol dehydrog 93.5 0.027 9.2E-07 52.4 2.2 85 147-236 190-290 (371)
480 3d7l_A LIN1944 protein; APC893 93.5 0.056 1.9E-06 45.2 3.9 58 150-208 5-67 (202)
481 4dup_A Quinone oxidoreductase; 93.4 0.023 7.8E-07 52.7 1.4 84 147-236 167-266 (353)
482 3ius_A Uncharacterized conserv 93.4 0.056 1.9E-06 47.8 3.9 61 148-210 5-74 (286)
483 1fjh_A 3alpha-hydroxysteroid d 93.4 0.087 3E-06 45.8 5.1 92 149-240 2-118 (257)
484 3slg_A PBGP3 protein; structur 93.4 0.068 2.3E-06 49.2 4.6 65 145-209 21-101 (372)
485 1vj0_A Alcohol dehydrogenase, 93.3 0.092 3.2E-06 49.0 5.5 36 147-182 195-231 (380)
486 2vn8_A Reticulon-4-interacting 93.3 0.19 6.3E-06 46.8 7.6 88 147-238 183-283 (375)
487 3h9e_O Glyceraldehyde-3-phosph 93.3 0.072 2.5E-06 49.4 4.6 32 149-180 8-40 (346)
488 4b7c_A Probable oxidoreductase 93.3 0.018 6E-07 52.8 0.5 85 147-237 149-250 (336)
489 2x4g_A Nucleoside-diphosphate- 93.3 0.11 3.6E-06 47.1 5.8 61 149-209 14-87 (342)
490 1sb8_A WBPP; epimerase, 4-epim 93.3 0.11 3.7E-06 47.5 5.8 65 145-209 24-112 (352)
491 3ip3_A Oxidoreductase, putativ 93.2 0.072 2.4E-06 48.9 4.5 62 149-211 3-79 (337)
492 2d2i_A Glyceraldehyde 3-phosph 93.2 0.065 2.2E-06 50.5 4.2 29 149-177 3-34 (380)
493 1uzm_A 3-oxoacyl-[acyl-carrier 93.2 0.2 6.8E-06 43.6 7.1 40 144-183 11-51 (247)
494 3goh_A Alcohol dehydrogenase, 93.1 0.058 2E-06 48.9 3.6 82 147-235 142-229 (315)
495 1e6u_A GDP-fucose synthetase; 93.1 0.11 3.9E-06 46.5 5.6 61 148-210 3-66 (321)
496 3qwb_A Probable quinone oxidor 93.1 0.064 2.2E-06 49.0 3.9 36 147-182 148-184 (334)
497 3tqh_A Quinone oxidoreductase; 93.1 0.051 1.7E-06 49.5 3.2 84 147-236 152-246 (321)
498 1smk_A Malate dehydrogenase, g 93.0 0.057 1.9E-06 49.7 3.5 92 148-242 8-130 (326)
499 3jyn_A Quinone oxidoreductase; 93.0 0.035 1.2E-06 50.6 2.1 84 147-236 140-240 (325)
500 1qor_A Quinone oxidoreductase; 93.0 0.04 1.4E-06 50.2 2.5 35 147-181 140-175 (327)
No 1
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.2e-75 Score=546.77 Aligned_cols=314 Identities=41% Similarity=0.678 Sum_probs=258.2
Q ss_pred CCCCCcEEEEeCCCChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCC
Q 042102 3 NNSNNIIVLMVCPVSNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGL 82 (317)
Q Consensus 3 ~~~~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 82 (317)
.+++||+||+++++.++..+.|++.|+++......+.++++.+. +++|++++++..++++++++++|+||+|+++|+|+
T Consensus 26 ~~~~~~~vl~~~~~~~~~~~~L~~~~~v~~~~~~~~~~~~~~~~-~~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G~ 104 (340)
T 4dgs_A 26 FRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAAL-PSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVGT 104 (340)
T ss_dssp -------CEECSCCCHHHHHTHHHHSCCEETTCGGGHHHHHHHG-GGCCEEEEETTTCBCHHHHHHCSSCCEEEEESSCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHhcCCcEEEeCCCCCHHHHHHHh-CCcEEEEEcCCCCCCHHHHhhCCCCEEEEECCCCc
Confidence 34578999999999999999999999887643322244455544 88999999887899999999999999999999999
Q ss_pred CcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccC-cccccccccCCeEEEEecChhHH
Q 042102 83 DKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKG-EFKMTTKFTGKSVGILGMGRIGT 161 (317)
Q Consensus 83 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~-~~~~~~~l~g~~vgIiG~G~iG~ 161 (317)
||||+++|+++||.|+|+||+++++||||+++++|+++|+++++++.+++|.|.+. .++.+.+++|+||||||+|.||+
T Consensus 105 d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~ 184 (340)
T 4dgs_A 105 DKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGR 184 (340)
T ss_dssp TTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHH
T ss_pred cccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999853 33457899999999999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 162 AIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 162 ~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
.+|+++++|||+|++|++++....+.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|
T Consensus 185 ~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvd 264 (340)
T 4dgs_A 185 ALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVD 264 (340)
T ss_dssp HHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC----
T ss_pred HHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccC
Confidence 99999999999999999987665555556799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 242 EHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 242 ~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
+++|+++|++|+|+||+||||++||++++|||++|||++|||+||+|.+++.++.+.+++||.+|++|+++.+.||
T Consensus 265 e~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 340 (340)
T 4dgs_A 265 EDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTVN 340 (340)
T ss_dssp ----------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCCTTBC-
T ss_pred HHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 9999999999999999999999999988899999999999999999999999999999999999999999999986
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=2.9e-73 Score=536.77 Aligned_cols=313 Identities=33% Similarity=0.467 Sum_probs=284.9
Q ss_pred CCCcEEEEeCCCChhHHHHHHhcCeEEEecC-CCChHHHHhhccCCceEEEEeCCCCCCHHHHhcC-CCceEEEECCCCC
Q 042102 5 SNNIIVLMVCPVSNYLEQEIEKSFKVFKLWH-FEDKEQFINTHKDSIQAVVGSAAAGADAELIESL-PKLEIVATCSVGL 82 (317)
Q Consensus 5 ~~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~ 82 (317)
++|||||+++++.++..+.|++.|++..... .+..++.+.+.++++|++++++..++++++++++ |+||+|+++|+|+
T Consensus 26 ~~~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~ 105 (345)
T 4g2n_A 26 HPIQKAFLCRRFTPAIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSVGY 105 (345)
T ss_dssp -CCCEEEESSCCCHHHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCcc
Confidence 4689999999999999999999998875432 2224555666789999999887789999999997 7999999999999
Q ss_pred CcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCc--ccccccccCCeEEEEecChhH
Q 042102 83 DKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGE--FKMTTKFTGKSVGILGMGRIG 160 (317)
Q Consensus 83 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~--~~~~~~l~g~~vgIiG~G~iG 160 (317)
|+||+++|+++||.|+|+||+++++||||+++++|++.|++.++++.+++|.|.... ...+.+++|+||||||+|.||
T Consensus 106 D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG 185 (345)
T 4g2n_A 106 DHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIG 185 (345)
T ss_dssp TTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHH
T ss_pred cccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhH
Confidence 999999999999999999999999999999999999999999999999999997421 235789999999999999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCC---CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 161 TAIAKRAEAFDCIIGYNSRTEKPN---LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 161 ~~~a~~l~~~G~~V~~~~~~~~~~---~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
+.+|+++++|||+|++||++.... .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||
T Consensus 186 ~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG 265 (345)
T 4g2n_A 186 RAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRG 265 (345)
T ss_dssp HHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred HHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence 999999999999999999976432 23444568999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 238 LLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 238 ~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
++||+++|+++|++|+|+||+||||++||..++|||++|||++|||+||+|.+++.++.+.+++||.+|++|+++.|.|.
T Consensus 266 ~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~~~~V~ 345 (345)
T 4g2n_A 266 DLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVPDNLIS 345 (345)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred chhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999999999999656799999999999999999999999999999999999999999999874
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=6.5e-71 Score=519.06 Aligned_cols=311 Identities=26% Similarity=0.410 Sum_probs=282.5
Q ss_pred CCcEEEEeCCCChhHHHHHHhcCeEEEecCC-CChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCc
Q 042102 6 NNIIVLMVCPVSNYLEQEIEKSFKVFKLWHF-EDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDK 84 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 84 (317)
|+||||++.++.++..+.|++.++++..... +..++.+.+.++++|++++++..++++++++++|+||+|+++|+|+||
T Consensus 1 m~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~ 80 (330)
T 4e5n_A 1 MLPKLVITHRVHEEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVIGCALKGFDN 80 (330)
T ss_dssp CCCEEEECSCCCHHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHCTTCCEEEESSSCCTT
T ss_pred CCCEEEEecCCCHHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhCCCCcEEEECCCcccc
Confidence 4799999999999999999999877653321 223455566788999999877789999999999999999999999999
Q ss_pred CChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCcc-CcccccccccCCeEEEEecChhHHHH
Q 042102 85 IDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKK-GEFKMTTKFTGKSVGILGMGRIGTAI 163 (317)
Q Consensus 85 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~-~~~~~~~~l~g~~vgIiG~G~iG~~~ 163 (317)
||+++|+++||.|+|+||+++.+||||+++++|+++|++.++++.+++|.|.. .....+.+++|+||||||+|.||+.+
T Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~v 160 (330)
T 4e5n_A 81 FDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAM 160 (330)
T ss_dssp BCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHH
T ss_pred cCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999972 22235789999999999999999999
Q ss_pred HHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 164 AKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 164 a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
|+++++|||+|++||++.... .+. ...++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~ 239 (330)
T 4e5n_A 161 ADRLQGWGATLQYHEAKALDTQTEQRLGL-RQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGS 239 (330)
T ss_dssp HHHTTTSCCEEEEECSSCCCHHHHHHHTE-EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred HHHHHHCCCEEEEECCCCCcHhHHHhcCc-eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence 999999999999999986321 122 24589999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCceEEEeeCCCCC-------CCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 042102 239 LVDEHELVSALLQGRLGGAGLDVFEHE-------PDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKK 310 (317)
Q Consensus 239 ~vd~~aL~~al~~g~i~ga~lDV~~~E-------P~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~ 310 (317)
++|+++|+++|++|+|.||+||||++| |++. +|||++|||++|||+||+|.++++++.+.+++|+.+|++|+
T Consensus 240 ~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~ 319 (330)
T 4e5n_A 240 VVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGE 319 (330)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999 9654 59999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 042102 311 PLLTPVV 317 (317)
Q Consensus 311 ~~~~~v~ 317 (317)
++.|.||
T Consensus 320 ~~~~~vn 326 (330)
T 4e5n_A 320 RPINAVN 326 (330)
T ss_dssp CCTTBSS
T ss_pred CCCCccC
Confidence 9999886
No 4
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=6.1e-72 Score=526.65 Aligned_cols=305 Identities=24% Similarity=0.378 Sum_probs=262.2
Q ss_pred cEEEEeCCCChh---HHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCc
Q 042102 8 IIVLMVCPVSNY---LEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDK 84 (317)
Q Consensus 8 ~~vl~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 84 (317)
||||++.....+ +.+.++ .+....+.. + ..+...+.++++|+++++..+++++++|+++|+||+|+++|+|+||
T Consensus 1 Mkil~~~~~~~~~p~~~e~l~-~~~~~~~~~-~-~~~~~~~~l~~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~ 77 (334)
T 3kb6_A 1 MNVLFTSVPQEDVPFYQEALK-DLSLKIYTT-D-VSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDH 77 (334)
T ss_dssp -CEEECSCCTTHHHHHHHHTT-TSCEEECSS-C-GGGSCHHHHHHCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTT
T ss_pred CEEEEeCCCcccCHHHHHHHH-hCCcEEEeC-C-cccCCHHHhcCCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccch
Confidence 789998743332 223333 333333221 1 1111112245689998888889999999999999999999999999
Q ss_pred CChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHH
Q 042102 85 IDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIA 164 (317)
Q Consensus 85 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a 164 (317)
||+++|+++||.|+|+||+++.+||||+++++|++.|++.++++.++.+.|.......+.+++|+|+||||+|.||+.+|
T Consensus 78 id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va 157 (334)
T 3kb6_A 78 IDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVA 157 (334)
T ss_dssp BCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHH
T ss_pred hcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999875444568899999999999999999999
Q ss_pred HHHhhCCCEEEEeCCCCCCCC--CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCH
Q 042102 165 KRAEAFDCIIGYNSRTEKPNL--NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 165 ~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
+++++|||+|++||+...... ......++++++++||+|++|||+|++|+|+|+++.|++||+|++|||+|||++||+
T Consensus 158 ~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde 237 (334)
T 3kb6_A 158 MYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDT 237 (334)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred HhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccH
Confidence 999999999999998765321 122457899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEeeCCCCCCCCCc----------------ccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHH
Q 042102 243 HELVSALLQGRLGGAGLDVFEHEPDVPE----------------ELIGLENVVLLPHVASATVETRKAMADLVVGNLQAH 306 (317)
Q Consensus 243 ~aL~~al~~g~i~ga~lDV~~~EP~~~~----------------~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~ 306 (317)
+||++||++|+|+||+||||++||++.+ +||++|||++|||+||+|.++++++.+.+++|+.+|
T Consensus 238 ~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~ 317 (334)
T 3kb6_A 238 DALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAF 317 (334)
T ss_dssp HHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999996421 589999999999999999999999999999999999
Q ss_pred HCCCCCCCC
Q 042102 307 FGKKPLLTP 315 (317)
Q Consensus 307 ~~g~~~~~~ 315 (317)
++|+++...
T Consensus 318 l~Ge~~~~~ 326 (334)
T 3kb6_A 318 VKGDLEQIK 326 (334)
T ss_dssp HHTCGGGGG
T ss_pred HcCCCCcCC
Confidence 999976543
No 5
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=3.1e-70 Score=525.52 Aligned_cols=311 Identities=26% Similarity=0.383 Sum_probs=277.2
Q ss_pred CCCcEEEEeCCCChhHHHHHHhc-C-eEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCC
Q 042102 5 SNNIIVLMVCPVSNYLEQEIEKS-F-KVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGL 82 (317)
Q Consensus 5 ~~~~~vl~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 82 (317)
++|||||+++++.+...+.|++. | ++.. ......++.+.+.++++|++++++.+++++++++++|+||+|+++++|+
T Consensus 13 ~~~~kIl~~~~i~~~~~~~l~~~g~~~v~~-~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~ 91 (416)
T 3k5p_A 13 RDRINVLLLEGISQTAVEYFKSSGYTNVTH-LPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAANRLIAVGCFSVGT 91 (416)
T ss_dssp GGGSCEEECSCCCHHHHHHHHHTTCCCEEE-CSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHCTTCCEEEECSSCC
T ss_pred CCCcEEEEECCCCHHHHHHHHHCCCcEEEE-CCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhCCCcEEEEECcccc
Confidence 35799999999999999999864 6 5554 3222245555667889999988888899999999999999999999999
Q ss_pred CcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHH
Q 042102 83 DKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTA 162 (317)
Q Consensus 83 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~ 162 (317)
||||+++|+++||.|+|+|++++++||||+++++|+++|+++++++.+++|.|.+.. ..+.+++|+|+||||+|.||+.
T Consensus 92 d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~-~~~~el~gktvGIIGlG~IG~~ 170 (416)
T 3k5p_A 92 NQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTA-IGSREVRGKTLGIVGYGNIGSQ 170 (416)
T ss_dssp TTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC-TTCCCSTTCEEEEECCSHHHHH
T ss_pred CccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccC-CCCccCCCCEEEEEeeCHHHHH
Confidence 999999999999999999999999999999999999999999999999999998543 2468999999999999999999
Q ss_pred HHHHHhhCCCEEEEeCCCCCCCC-CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 163 IAKRAEAFDCIIGYNSRTEKPNL-NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 163 ~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
+|+++++|||+|++||++..... ......++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||++||
T Consensus 171 vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd 250 (416)
T 3k5p_A 171 VGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVD 250 (416)
T ss_dssp HHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBC
T ss_pred HHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhh
Confidence 99999999999999998765432 23446789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeeCCCCCCCCC-----cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q 042102 242 EHELVSALLQGRLGGAGLDVFEHEPDVP-----EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPV 316 (317)
Q Consensus 242 ~~aL~~al~~g~i~ga~lDV~~~EP~~~-----~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 316 (317)
+++|+++|++|+|+||+||||++||+++ +|||++|||++|||+||+|.|+++++...+++|+.+|+.++.+.+.|
T Consensus 251 ~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~V 330 (416)
T 3k5p_A 251 LEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAV 330 (416)
T ss_dssp HHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTBS
T ss_pred HHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCcee
Confidence 9999999999999999999999999865 48999999999999999999999999999999999999888888877
Q ss_pred C
Q 042102 317 V 317 (317)
Q Consensus 317 ~ 317 (317)
|
T Consensus 331 n 331 (416)
T 3k5p_A 331 N 331 (416)
T ss_dssp S
T ss_pred e
Confidence 5
No 6
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=1.7e-69 Score=521.45 Aligned_cols=311 Identities=25% Similarity=0.350 Sum_probs=272.5
Q ss_pred CCCcEEEEeCCCChhHHHHHHhc-C-eEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCC
Q 042102 5 SNNIIVLMVCPVSNYLEQEIEKS-F-KVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGL 82 (317)
Q Consensus 5 ~~~~~vl~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 82 (317)
.++||||+++++.+...+.|++. | ++.+... ...++.+.+.++++|++++++.+++++++++++|+||+|+++|+|+
T Consensus 2 ~~~~kil~~~~~~~~~~~~l~~~~~~~v~~~~~-~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 80 (404)
T 1sc6_A 2 KDKIKFLLVEGVHQKALESLRAAGYTNIEFHKG-ALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGT 80 (404)
T ss_dssp CSSCCEEECSCCCHHHHHHHHHTTCCCEEECSS-CCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECSSCC
T ss_pred CCceEEEEeCCCCHHHHHHHHhCCCcEEEEcCC-CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCcEEEECCccc
Confidence 45689999999988888888764 6 5664322 2234555566889999988888899999999999999999999999
Q ss_pred CcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHH
Q 042102 83 DKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTA 162 (317)
Q Consensus 83 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~ 162 (317)
||||+++|+++||.|+|+|++++.+||||++++||+++|+++++++.+++|.|.+.. ..+.+++|+|+||||+|.||+.
T Consensus 81 d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~-~~~~el~gktlGiIGlG~IG~~ 159 (404)
T 1sc6_A 81 NQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLA-AGSFEARGKKLGIIGYGHIGTQ 159 (404)
T ss_dssp TTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC------CCCSTTCEEEEECCSHHHHH
T ss_pred CccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccC-CCccccCCCEEEEEeECHHHHH
Confidence 999999999999999999999999999999999999999999999999999997532 2467999999999999999999
Q ss_pred HHHHHhhCCCEEEEeCCCCCCCCC-ccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 163 IAKRAEAFDCIIGYNSRTEKPNLN-YKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 163 ~a~~l~~~G~~V~~~~~~~~~~~~-~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
+|+++++|||+|++||++.....+ .....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|
T Consensus 160 vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd 239 (404)
T 1sc6_A 160 LGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVD 239 (404)
T ss_dssp HHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBC
T ss_pred HHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHh
Confidence 999999999999999997654433 3345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeeCCCCCCCCC-----cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q 042102 242 EHELVSALLQGRLGGAGLDVFEHEPDVP-----EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPV 316 (317)
Q Consensus 242 ~~aL~~al~~g~i~ga~lDV~~~EP~~~-----~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 316 (317)
+++|+++|++|+++||+||||+.||.++ +|||++|||++|||+|++|.|+++++...+++|+.+|++|+++.+.|
T Consensus 240 ~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~v 319 (404)
T 1sc6_A 240 IPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAV 319 (404)
T ss_dssp HHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTBS
T ss_pred HHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 9999999999999999999999999763 48999999999999999999999999999999999999999888877
Q ss_pred C
Q 042102 317 V 317 (317)
Q Consensus 317 ~ 317 (317)
|
T Consensus 320 n 320 (404)
T 1sc6_A 320 N 320 (404)
T ss_dssp S
T ss_pred c
Confidence 5
No 7
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=2.3e-69 Score=506.17 Aligned_cols=302 Identities=22% Similarity=0.356 Sum_probs=268.0
Q ss_pred CCcEEEEeCCCChhHHHHH-HhcCe-EEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCC
Q 042102 6 NNIIVLMVCPVSNYLEQEI-EKSFK-VFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLD 83 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d 83 (317)
.|||||++.+..+.+.+.| ++.++ +.... .. .++.+.+.++++|+++++. .+++++++++|+||||+++|+|+|
T Consensus 4 ~~mkili~~~~~~~~~~~L~~~~~p~~~~~~-~~-~~~~~~~~~~~ad~li~~~--~~~~~~l~~~~~Lk~I~~~~~G~d 79 (324)
T 3hg7_A 4 SQRTLLLLSQDNAHYERLLKAAHLPHLRILR-AD-NQSDAEKLIGEAHILMAEP--ARAKPLLAKANKLSWFQSTYAGVD 79 (324)
T ss_dssp CCEEEEEESTTHHHHHHHHHHSCCTTEEEEE-CS-SHHHHHHHGGGCSEEEECH--HHHGGGGGGCTTCCEEEESSSCCG
T ss_pred cccEEEEecCCCHHHHHHHhhccCCCeEEEe-CC-ChhHHHHHhCCCEEEEECC--CCCHHHHhhCCCceEEEECCCCCC
Confidence 4699999999999999999 66543 33222 22 2334455678899988743 466789999999999999999999
Q ss_pred cCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHH
Q 042102 84 KIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAI 163 (317)
Q Consensus 84 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~ 163 (317)
+||++++++ ||.|+|+||+++.+||||+++++|++.|+++++++.+++|.|... .+.+++|+||||||+|.||+.+
T Consensus 80 ~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~---~~~~l~g~tvGIIGlG~IG~~v 155 (324)
T 3hg7_A 80 VLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH---PYQGLKGRTLLILGTGSIGQHI 155 (324)
T ss_dssp GGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CCCCSTTCEEEEECCSHHHHHH
T ss_pred ccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC---CCcccccceEEEEEECHHHHHH
Confidence 999988764 999999999999999999999999999999999999999999842 3578999999999999999999
Q ss_pred HHHHhhCCCEEEEeCCCCCCCCCc---cccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc
Q 042102 164 AKRAEAFDCIIGYNSRTEKPNLNY---KYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 164 a~~l~~~G~~V~~~~~~~~~~~~~---~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v 240 (317)
|+++++|||+|++|++++...... ....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++
T Consensus 156 A~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~v 235 (324)
T 3hg7_A 156 AHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAI 235 (324)
T ss_dssp HHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGB
T ss_pred HHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhh
Confidence 999999999999999987543322 23468999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 241 DEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 241 d~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
|+++|+++|++|+|+||+||||++||+++ +|||++|||++|||+||+|.+ .++.+.+++|+.+|++|+++.|.|+
T Consensus 236 de~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V~ 311 (324)
T 3hg7_A 236 NEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKID 311 (324)
T ss_dssp CHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred CHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceEC
Confidence 99999999999999999999999999876 499999999999999999976 5799999999999999999999875
No 8
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=1.2e-69 Score=511.12 Aligned_cols=307 Identities=25% Similarity=0.362 Sum_probs=270.5
Q ss_pred cEEEEeCCC--ChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcC
Q 042102 8 IIVLMVCPV--SNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKI 85 (317)
Q Consensus 8 ~~vl~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 85 (317)
|||++.... ..+..+++.+.+++..+. .. ..+.+.+.++++|+++++...++++++++++|+||+|++.|+|+|||
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~i 78 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALKDLSLKIYT-TD-VSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHI 78 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTTTSEEEECS-SC-GGGSCHHHHHHCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTB
T ss_pred CEEEEEccChhhHHHHHHHhhcCCEEEEC-CC-CcHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcccccc
Confidence 588876642 223455565666665432 22 22334455678999998777899999999999999999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHH
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAK 165 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~ 165 (317)
|+++|+++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.+.....+.+|+|+||||||+|.||+++|+
T Consensus 79 d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~ 158 (334)
T 2pi1_A 79 DLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAM 158 (334)
T ss_dssp CHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHH
T ss_pred CHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999854123578999999999999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCC---CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCH
Q 042102 166 RAEAFDCIIGYNSRTEKPN---LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 166 ~l~~~G~~V~~~~~~~~~~---~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
++++|||+|++||++.... .+. ...++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+
T Consensus 159 ~l~~~G~~V~~~d~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~ 237 (334)
T 2pi1_A 159 YGLAFGMKVLCYDVVKREDLKEKGC-VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDT 237 (334)
T ss_dssp HHHHTTCEEEEECSSCCHHHHHTTC-EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred HHHHCcCEEEEECCCcchhhHhcCc-eecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCH
Confidence 9999999999999987543 122 245699999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceEEEeeCCCCCCC---------------C-CcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHH
Q 042102 243 HELVSALLQGRLGGAGLDVFEHEPD---------------V-PEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAH 306 (317)
Q Consensus 243 ~aL~~al~~g~i~ga~lDV~~~EP~---------------~-~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~ 306 (317)
++|+++|++|+|.||+||||++||+ + .+|||++|||++|||+|++|.++++++.+.+++||.+|
T Consensus 238 ~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~ 317 (334)
T 2pi1_A 238 DALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAF 317 (334)
T ss_dssp HHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 2 34899999999999999999999999999999999999
Q ss_pred HCCCCCCCCCC
Q 042102 307 FGKKPLLTPVV 317 (317)
Q Consensus 307 ~~g~~~~~~v~ 317 (317)
++|+++.|.|+
T Consensus 318 ~~g~~~~~~Vn 328 (334)
T 2pi1_A 318 VKGDLEQIKGN 328 (334)
T ss_dssp HHTCGGGGGGG
T ss_pred HcCCCCCceEC
Confidence 99999998874
No 9
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=7.1e-69 Score=506.50 Aligned_cols=308 Identities=19% Similarity=0.259 Sum_probs=266.4
Q ss_pred cEEEEeCCC--ChhHHHHHH-h-cCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHH-HHhcCC--CceEEEECCC
Q 042102 8 IIVLMVCPV--SNYLEQEIE-K-SFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAE-LIESLP--KLEIVATCSV 80 (317)
Q Consensus 8 ~~vl~~~~~--~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-~l~~~~--~Lk~i~~~~~ 80 (317)
|||++.... ...+.+.+. + .+++..... ... +.+.+.++++|+++++...+++++ +++++| +||+|+++|+
T Consensus 2 mki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~-~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~ 79 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQ-ALT-SATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIV 79 (343)
T ss_dssp CEEEEESCCGGGHHHHHHHHHHHTCEEEEESS-CCS-TTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSS
T ss_pred ceEEEEecCcccHHHHHHHHHhCCeEEEECCC-CCC-HHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECce
Confidence 788887732 223344443 2 356654332 212 234466889999999877899999 999986 6999999999
Q ss_pred CCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHH-cCCCccCcccccccccCCeEEEEecChh
Q 042102 81 GLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVR-SGEWKKGEFKMTTKFTGKSVGILGMGRI 159 (317)
Q Consensus 81 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~-~~~w~~~~~~~~~~l~g~~vgIiG~G~i 159 (317)
|+|+||+++|+++||.|+|+||+++++||||+++++|++.|++.++++.++ +|.|.+.....+.+++|+||||||+|.|
T Consensus 80 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~I 159 (343)
T 2yq5_A 80 GFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHI 159 (343)
T ss_dssp CCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHH
T ss_pred eecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHH
Confidence 999999999999999999999999999999999999999999999999999 8877643334678999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCC-CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 160 GTAIAKRAEAFDCIIGYNSRTEKPNL-NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 160 G~~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
|+.+|+++++|||+|++||++..... ......++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+
T Consensus 160 G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 239 (343)
T 2yq5_A 160 GSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGE 239 (343)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred HHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCCh
Confidence 99999999999999999999875432 12234589999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCceEEEeeCCCCCC--CCCc------------ccCCCCceEEcccCCCccHHHHHHHHHHHHHHHH
Q 042102 239 LVDEHELVSALLQGRLGGAGLDVFEHEP--DVPE------------ELIGLENVVLLPHVASATVETRKAMADLVVGNLQ 304 (317)
Q Consensus 239 ~vd~~aL~~al~~g~i~ga~lDV~~~EP--~~~~------------~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~ 304 (317)
+||+++|+++|++|+|.||+||||++|| ++.+ |||++|||++|||+|++|.++++++.+.+++|+.
T Consensus 240 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~ 319 (343)
T 2yq5_A 240 LVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQL 319 (343)
T ss_dssp GBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 3332 7999999999999999999999999999999999
Q ss_pred HHHCCCCCCCCCC
Q 042102 305 AHFGKKPLLTPVV 317 (317)
Q Consensus 305 ~~~~g~~~~~~v~ 317 (317)
+|++|+++.|.|+
T Consensus 320 ~~l~g~~~~~~v~ 332 (343)
T 2yq5_A 320 TIAKGGRPRSIVN 332 (343)
T ss_dssp HHHTTCCCTTBC-
T ss_pred HHHcCCCCCceEC
Confidence 9999999999875
No 10
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5e-69 Score=504.45 Aligned_cols=302 Identities=23% Similarity=0.324 Sum_probs=267.4
Q ss_pred cEEEEeCCCChhHHHHHHhcCe-EEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHH-hcCCCceEEEECCCCCCcC
Q 042102 8 IIVLMVCPVSNYLEQEIEKSFK-VFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELI-ESLPKLEIVATCSVGLDKI 85 (317)
Q Consensus 8 ~~vl~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l-~~~~~Lk~i~~~~~G~d~i 85 (317)
||||+++++.++..+.|++.++ +......+ ...+.+.++|+++++. .++ ++++ +++|+||||+++|+|+|+|
T Consensus 2 ~kil~~~~~~~~~~~~L~~~~~~~~~~~~~~----~~~~~~~~ad~l~~~~-~~~-~~~l~~~~~~Lk~I~~~~~G~d~i 75 (324)
T 3evt_A 2 SLVLMAQATKPEQLQQLQTTYPDWTFKDAAA----VTAADYDQIEVMYGNH-PLL-KTILARPTNQLKFVQVISAGVDYL 75 (324)
T ss_dssp CEEEECSCCCHHHHHHHHHHCTTCEEEETTS----CCTTTGGGEEEEESCC-THH-HHHHHSTTCCCCEEECSSSCCTTS
T ss_pred cEEEEecCCCHHHHHHHHhhCCCeEEecCCc----cChHHhCCcEEEEECC-cCh-HHHHHhhCCCceEEEECCcccccc
Confidence 7899999999999999988653 22111111 1223456789888754 356 8999 7899999999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHH-HHHHHcCCCccCcccccccccCCeEEEEecChhHHHHH
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICES-DRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIA 164 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~-~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a 164 (317)
|+++|+++||.|+|+||+++.+||||+++++|++.|++.++ .+.+++|.|.... .+.+++|+||||||+|.||+.+|
T Consensus 76 d~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~--~~~~l~gktvGIiGlG~IG~~vA 153 (324)
T 3evt_A 76 PLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM--TTSTLTGQQLLIYGTGQIGQSLA 153 (324)
T ss_dssp CHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS--CCCCSTTCEEEEECCSHHHHHHH
T ss_pred CHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC--CCccccCCeEEEECcCHHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999998532 47899999999999999999999
Q ss_pred HHHhhCCCEEEEeCCCCCCCCCc---cccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 165 KRAEAFDCIIGYNSRTEKPNLNY---KYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 165 ~~l~~~G~~V~~~~~~~~~~~~~---~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
+++++|||+|++|+++....... ....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|
T Consensus 154 ~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 233 (324)
T 3evt_A 154 AKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVD 233 (324)
T ss_dssp HHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBC
T ss_pred HHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhh
Confidence 99999999999999887554322 124579999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCC-CCCCCCCC
Q 042102 242 EHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGK-KPLLTPVV 317 (317)
Q Consensus 242 ~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g-~~~~~~v~ 317 (317)
+++|+++|++|+|+||+||||++||+++ +|||++|||++|||+||+|.++.+++.+.+++|+.+|++| +++.|.|+
T Consensus 234 ~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V~ 311 (324)
T 3evt_A 234 TTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVD 311 (324)
T ss_dssp HHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBCC
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceEC
Confidence 9999999999999999999999999876 5999999999999999999999999999999999999965 56788774
No 11
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=1.9e-68 Score=505.67 Aligned_cols=308 Identities=23% Similarity=0.353 Sum_probs=271.8
Q ss_pred CcEEEEeCCCChh-----HHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEE-eCCCCCCHHHHhcCCCceEEEECCC
Q 042102 7 NIIVLMVCPVSNY-----LEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVG-SAAAGADAELIESLPKLEIVATCSV 80 (317)
Q Consensus 7 ~~~vl~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~-~~~~~~~~~~l~~~~~Lk~i~~~~~ 80 (317)
+|||++++.+... .++.|+ .+++..+......++.+.+.++++|++++ +...++++++++++|+||+|+++|+
T Consensus 2 smki~~~d~~~~~~~~~~~~~~l~-~~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~g~ 80 (352)
T 3gg9_A 2 SLKIAVLDDYQDAVRKLDCFSLLQ-DHEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQTGR 80 (352)
T ss_dssp CCEEEECCCTTCCGGGSGGGGGGT-TSEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTCTTCCEEEESSC
T ss_pred ceEEEEEcCccccchhhhhhhhhc-CceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhCCCCeEEEEeCc
Confidence 4899999876532 123454 37777644322244556677899999998 4568899999999999999999999
Q ss_pred CC----CcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCc---------cccccccc
Q 042102 81 GL----DKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGE---------FKMTTKFT 147 (317)
Q Consensus 81 G~----d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~---------~~~~~~l~ 147 (317)
|+ |+||+++|+++||.|+|+||+ +.+||||+++++|++.|+++++++.+++|.|.... ...+.+++
T Consensus 81 G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~ 159 (352)
T 3gg9_A 81 VSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK 159 (352)
T ss_dssp CCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT
T ss_pred ccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC
Confidence 99 999999999999999999999 99999999999999999999999999999998532 12478999
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
|+||||||+|.||+.+|+++++|||+|++||++.... .+.....++++++++||+|++|+|++++|+++|+++.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 9999999999999999999999999999999875321 344445689999999999999999999999999999999
Q ss_pred ccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHH
Q 042102 224 ALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGN 302 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~n 302 (317)
.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||++. +|||++|||++|||+||+|.++++++...+++|
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 319 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQN 319 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999875 599999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCCC
Q 042102 303 LQAHFGKKPLLTPVV 317 (317)
Q Consensus 303 l~~~~~g~~~~~~v~ 317 (317)
|.+|++|+|+ |.||
T Consensus 320 i~~~~~G~p~-~~Vn 333 (352)
T 3gg9_A 320 ILDILQGNVD-SVAN 333 (352)
T ss_dssp HHHHHTTCCT-TBSC
T ss_pred HHHHHcCCCC-cccC
Confidence 9999999764 6664
No 12
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=8.5e-69 Score=507.69 Aligned_cols=295 Identities=23% Similarity=0.389 Sum_probs=263.3
Q ss_pred ChhHHHHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeCC--CCCCHHHHhcCCCceEEEECCCCCCcCChhhHhhC
Q 042102 17 SNYLEQEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSAA--AGADAELIESLPKLEIVATCSVGLDKIDLARCKEK 93 (317)
Q Consensus 17 ~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~--~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 93 (317)
...+.+.|++. ++++.........+.+.+.++++|++++++. .++++++++++|+||+|+++|+|+||||+++|+++
T Consensus 29 ~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~~ 108 (351)
T 3jtm_A 29 ALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAA 108 (351)
T ss_dssp GGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHHT
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHhc
Confidence 33467778764 7777544322233455677899999988643 46999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcc-cccccccCCeEEEEecChhHHHHHHHHhhCCC
Q 042102 94 GIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEF-KMTTKFTGKSVGILGMGRIGTAIAKRAEAFDC 172 (317)
Q Consensus 94 gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~ 172 (317)
||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..... ..+.+++|+||||||+|.||+.+|+++++|||
T Consensus 109 gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~ 188 (351)
T 3jtm_A 109 GLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGC 188 (351)
T ss_dssp TCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCC
T ss_pred CeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999974221 23678999999999999999999999999999
Q ss_pred EEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHH
Q 042102 173 IIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVS 247 (317)
Q Consensus 173 ~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~ 247 (317)
+|++|++++.+. .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|++
T Consensus 189 ~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~ 268 (351)
T 3jtm_A 189 NLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVD 268 (351)
T ss_dssp EEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHH
T ss_pred EEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHH
Confidence 999999876432 233445689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 042102 248 ALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKP 311 (317)
Q Consensus 248 al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 311 (317)
+|++|+|.||+||||++||+++ +|||++|||++|||+||.|.+++.++.+.+.+|+.+|++|++
T Consensus 269 aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~ 333 (351)
T 3jtm_A 269 AVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGED 333 (351)
T ss_dssp HHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999876 499999999999999999999999999999999999999996
No 13
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.9e-67 Score=495.94 Aligned_cols=311 Identities=72% Similarity=1.161 Sum_probs=285.7
Q ss_pred CcEEEEeCCCChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcCC
Q 042102 7 NIIVLMVCPVSNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKID 86 (317)
Q Consensus 7 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 86 (317)
||+|++++++.+...+.|++.+++.......+.++++.+.++++|++++++..++++++++++|+||+|+++|+|+|+||
T Consensus 23 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~p~Lk~I~~~~~G~d~id 102 (333)
T 3ba1_A 23 AIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSFSVGLDKVD 102 (333)
T ss_dssp CCEEEECSCCCHHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHCTTCCEEEESSSCCTTBC
T ss_pred CCEEEEeCCCCHHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhCCCCcEEEEcCccccccC
Confidence 68999999999988899988888765432233455566777899999987777899999999999999999999999999
Q ss_pred hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHHH
Q 042102 87 LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKR 166 (317)
Q Consensus 87 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~ 166 (317)
+++|+++||.|+|+||+++.+||||+++++|+++|++.++++.+++|.|.+.....+.+++|++|||||+|.||+.+|++
T Consensus 103 ~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~ 182 (333)
T 3ba1_A 103 LIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAER 182 (333)
T ss_dssp HHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHH
T ss_pred HHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997433335789999999999999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHH
Q 042102 167 AEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELV 246 (317)
Q Consensus 167 l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~ 246 (317)
+++||++|++|+++.....+.....++++++++||+|++|+|.+++|+++++++.++.||+|++|||++||.++|+++|.
T Consensus 183 l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~ 262 (333)
T 3ba1_A 183 AEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELV 262 (333)
T ss_dssp HHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHH
T ss_pred HHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHH
Confidence 99999999999998765545545678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 247 SALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 247 ~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
++|++|+++||++|||++||.++++||++|||++|||+|+.|.++..++.+.+++|+.+|++|+++.|.||
T Consensus 263 ~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 263 SALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp HHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred HHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999877899999999999999999999999999999999999999999999886
No 14
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=3.6e-68 Score=504.90 Aligned_cols=306 Identities=19% Similarity=0.276 Sum_probs=263.4
Q ss_pred CcEEEEeCCC--------ChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEEC
Q 042102 7 NIIVLMVCPV--------SNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATC 78 (317)
Q Consensus 7 ~~~vl~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~ 78 (317)
.+++++.++. .++.++.|++.|+++.. .....++++++.+.++++++. ..++++++++++|+||+|++.
T Consensus 27 ~r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~-~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~p~Lk~I~~~ 103 (365)
T 4hy3_A 27 ERPLAISAPEPRSLDLIFSDEARAALHSKYEIVEA-DPENIAGLGDDILGRARYIIG--QPPLSAETLARMPALRSILNV 103 (365)
T ss_dssp -CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEEC-CGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTCTTCCEEECC
T ss_pred CCCEEEEcCCcccccccCCHHHHHHHhCCcEEEEC-CCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhCCCCeEEEEe
Confidence 3456666654 44577889888988743 222233444444456777764 468999999999999999975
Q ss_pred -CCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCc--cCcccccccccCCeEEEEe
Q 042102 79 -SVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWK--KGEFKMTTKFTGKSVGILG 155 (317)
Q Consensus 79 -~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~--~~~~~~~~~l~g~~vgIiG 155 (317)
|+|+||||+++|+++||.|+|+||+++.+||||+++++|+++|++.++++.+++|.|. ......+.+++|+||||||
T Consensus 104 ~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIG 183 (365)
T 4hy3_A 104 ESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVG 183 (365)
T ss_dssp SSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEEC
T ss_pred cccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEec
Confidence 8999999999999999999999999999999999999999999999999999999854 2222357899999999999
Q ss_pred cChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEE
Q 042102 156 MGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVL 231 (317)
Q Consensus 156 ~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavl 231 (317)
+|.||+.+|+++++|||+|++||++.... .+. ...++++++++||+|++|+|++++|+++|+++.|+.||+|++|
T Consensus 184 lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gail 262 (365)
T 4hy3_A 184 FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGV-EPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAF 262 (365)
T ss_dssp CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTC-EECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEE
T ss_pred CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCe-eeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEE
Confidence 99999999999999999999999875432 222 2468999999999999999999999999999999999999999
Q ss_pred EEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCC
Q 042102 232 INIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKK 310 (317)
Q Consensus 232 VN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~ 310 (317)
||+|||++||+++|+++|++|+|+ |+||||++||+++ +|||++|||++|||+||+|.+++.++...+++||.+|++|+
T Consensus 263 IN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~ 341 (365)
T 4hy3_A 263 ILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGL 341 (365)
T ss_dssp EECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998 8999999999875 59999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 042102 311 PLLTPVV 317 (317)
Q Consensus 311 ~~~~~v~ 317 (317)
++.+.|+
T Consensus 342 ~~~~~vn 348 (365)
T 4hy3_A 342 PPMRCKR 348 (365)
T ss_dssp CCCSSEE
T ss_pred Ccccccc
Confidence 9988763
No 15
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-67 Score=491.55 Aligned_cols=307 Identities=26% Similarity=0.402 Sum_probs=268.0
Q ss_pred CCCCcEEEEeCCCChhHHHHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCC
Q 042102 4 NSNNIIVLMVCPVSNYLEQEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGL 82 (317)
Q Consensus 4 ~~~~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 82 (317)
++..+||++++++.+...+.|++. +++.... .. .++.+.+.++++|+++++...++++++++++|+||||+++|+|+
T Consensus 23 ~~~~~~vli~~~~~~~~~~~l~~~~~~v~~~~-~~-~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 100 (335)
T 2g76_A 23 MANLRKVLISDSLDPCCRKILQDGGLQVVEKQ-NL-SKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGV 100 (335)
T ss_dssp ---CCEEEECSCCCHHHHHHHHHHTCEEEECC-SC-CHHHHHHHGGGCSEEEECSSSCBCHHHHHHCSSCCEEEESSSSC
T ss_pred hccceEEEEcCCCCHHHHHHHHhCCCEEEECC-CC-CHHHHHHHhcCceEEEEcCCCCCCHHHHhhCCCCcEEEECCCCc
Confidence 334468999999888888888765 5655432 22 33444556789999998777789999999999999999999999
Q ss_pred CcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHH
Q 042102 83 DKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTA 162 (317)
Q Consensus 83 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~ 162 (317)
|+||+++|+++||.|+|+||+++.+||||+++++|++.|+++++++.+++|.|.+.. ..+.+++|+||||||+|.||+.
T Consensus 101 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~-~~~~~l~g~tvgIIGlG~IG~~ 179 (335)
T 2g76_A 101 DNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKK-FMGTELNGKTLGILGLGRIGRE 179 (335)
T ss_dssp TTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGG-GCBCCCTTCEEEEECCSHHHHH
T ss_pred chhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccC-CCCcCCCcCEEEEEeECHHHHH
Confidence 999999999999999999999999999999999999999999999999999997432 2467999999999999999999
Q ss_pred HHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 163 IAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 163 ~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
+|+++++||++|++||++..+. .+.. ..++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+
T Consensus 180 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~ 258 (335)
T 2g76_A 180 VATRMQSFGMKTIGYDPIISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGG 258 (335)
T ss_dssp HHHHHHTTTCEEEEECSSSCHHHHHHTTCE-ECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTT
T ss_pred HHHHHHHCCCEEEEECCCcchhhhhhcCce-eCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCcc
Confidence 9999999999999999876532 2222 3589999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCC
Q 042102 239 LVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLT 314 (317)
Q Consensus 239 ~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~ 314 (317)
++|+++|+++|++|+|+||+||||+.||.+++|||++|||++|||+|++|.+++.++.+.+++|+.+|++|+++.|
T Consensus 259 vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 259 IVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp SBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred ccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999666799999999999999999999999999999999999999999876
No 16
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=5.6e-67 Score=493.14 Aligned_cols=308 Identities=22% Similarity=0.318 Sum_probs=267.4
Q ss_pred cEEEEeC--CCChhHHHHHHhc--CeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCC--ceEEEECCCC
Q 042102 8 IIVLMVC--PVSNYLEQEIEKS--FKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPK--LEIVATCSVG 81 (317)
Q Consensus 8 ~~vl~~~--~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~--Lk~i~~~~~G 81 (317)
|||++.. +......+.+.+. +++..... ... +.+.+.++++|++++++..++++++++++|+ ||+|+++|+|
T Consensus 1 Mkil~~~~~~~~~~~~~~l~~~~~~~v~~~~~-~~~-~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 78 (333)
T 1dxy_A 1 MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTE-FLD-ENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVG 78 (333)
T ss_dssp CEEEECSCCTTTHHHHHHHHHHHCCEEEECSS-CCC-TTGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSC
T ss_pred CEEEEEeccccCHHHHHHHHHhCCeEEEEcCC-CCh-HHHHHHhcCCeEEEEcCCCCCCHHHHHhCcccCceEEEEcCcc
Confidence 4788864 4445566666543 34443222 212 2344567899999987777899999999988 9999999999
Q ss_pred CCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHH
Q 042102 82 LDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGT 161 (317)
Q Consensus 82 ~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~ 161 (317)
+||||+++|+++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.+.....+.+++|+||||||+|.||+
T Consensus 79 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~ 158 (333)
T 1dxy_A 79 TDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQ 158 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHH
T ss_pred cCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999853111246799999999999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCC-CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc
Q 042102 162 AIAKRAEAFDCIIGYNSRTEKPNL-NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 162 ~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v 240 (317)
.+|+++++|||+|++||++..... ......++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++
T Consensus 159 ~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v 238 (333)
T 1dxy_A 159 VAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLI 238 (333)
T ss_dssp HHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSB
T ss_pred HHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCccc
Confidence 999999999999999998765431 1123458999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCceEEEeeCCCCCCC-----------CC---cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHH
Q 042102 241 DEHELVSALLQGRLGGAGLDVFEHEPD-----------VP---EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAH 306 (317)
Q Consensus 241 d~~aL~~al~~g~i~ga~lDV~~~EP~-----------~~---~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~ 306 (317)
|+++|+++|++|+|+||+||||++||. ++ +|||++|||++|||+||+|.+++.++.+.+++|+.+|
T Consensus 239 d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~ 318 (333)
T 1dxy_A 239 DTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDF 318 (333)
T ss_dssp CHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999993 12 3799999999999999999999999999999999999
Q ss_pred HCCCCCCCCCC
Q 042102 307 FGKKPLLTPVV 317 (317)
Q Consensus 307 ~~g~~~~~~v~ 317 (317)
++|+++.|.|+
T Consensus 319 ~~g~~~~~~v~ 329 (333)
T 1dxy_A 319 LTKGETSTEVT 329 (333)
T ss_dssp HHHSCCTTEEC
T ss_pred HcCCCCCceeC
Confidence 99999988764
No 17
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=7.3e-66 Score=481.33 Aligned_cols=307 Identities=36% Similarity=0.541 Sum_probs=276.2
Q ss_pred cEEEEeCCCChhHHHHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcCC
Q 042102 8 IIVLMVCPVSNYLEQEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKID 86 (317)
Q Consensus 8 ~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 86 (317)
||||++.++.++..+.|++. +++..........+.+.+.++++|+++++...++++++++++|+||||+++|+|+|+||
T Consensus 1 ~~vl~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 80 (311)
T 2cuk_A 1 MRVLVTRTLPGKALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDHVD 80 (311)
T ss_dssp CEEEESSCCSSSTTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHSTTCCEEECSSSCCTTBC
T ss_pred CEEEEeCCCCHHHHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcCccccC
Confidence 68999998888777888876 77764322222344455668899999987667899999999999999999999999999
Q ss_pred hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccC--cccccccccCCeEEEEecChhHHHHH
Q 042102 87 LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKG--EFKMTTKFTGKSVGILGMGRIGTAIA 164 (317)
Q Consensus 87 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~--~~~~~~~l~g~~vgIiG~G~iG~~~a 164 (317)
+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+++|.|... ....+.+++|+||||||+|.||+.+|
T Consensus 81 ~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A 160 (311)
T 2cuk_A 81 LEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVA 160 (311)
T ss_dssp HHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHH
T ss_pred HHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999631 11246789999999999999999999
Q ss_pred HHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHH
Q 042102 165 KRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHE 244 (317)
Q Consensus 165 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~a 244 (317)
+++++||++|++|+++..... ....++++++++||+|++|+|.+++|+++++++.|+.||+|+++||+|||+++|+++
T Consensus 161 ~~l~~~G~~V~~~d~~~~~~~--~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~a 238 (311)
T 2cuk_A 161 KRALAFGMRVVYHARTPKPLP--YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEA 238 (311)
T ss_dssp HHHHHTTCEEEEECSSCCSSS--SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHH
T ss_pred HHHHHCCCEEEEECCCCcccc--cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHH
Confidence 999999999999999876543 235689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 245 LVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 245 L~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
|.++|+ |+|.||++|||++||.+. ++||++||+++|||++++|.++..++.+.+++|+.+|++|+++.|.|+
T Consensus 239 L~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 311 (311)
T 2cuk_A 239 LVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPVV 311 (311)
T ss_dssp HHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBCC
T ss_pred HHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCccC
Confidence 999999 999999999999999654 599999999999999999999999999999999999999999998874
No 18
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=2.2e-66 Score=488.84 Aligned_cols=309 Identities=22% Similarity=0.311 Sum_probs=270.1
Q ss_pred cEEEEeC--CCChhHHHHHHhcCe--EEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCC--ceEEEECCCC
Q 042102 8 IIVLMVC--PVSNYLEQEIEKSFK--VFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPK--LEIVATCSVG 81 (317)
Q Consensus 8 ~~vl~~~--~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~--Lk~i~~~~~G 81 (317)
|||+++. +..+...+.+.+.+. +.. ......++.+.+.++++|+++++...++++++++++|+ ||+|++.|+|
T Consensus 1 mki~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 79 (331)
T 1xdw_A 1 MKVLCYGVRDVELPIFEACNKEFGYDIKC-VPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIYKKLGVKYILTRTAG 79 (331)
T ss_dssp CEEEECSCCTTTHHHHHHHGGGTCCEEEE-CSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHHHHHTCCEEEESSSC
T ss_pred CEEEEEecCccCHHHHHHHHHhcCeEEEE-CCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhCcccCceEEEEcccc
Confidence 5788865 555666777766543 433 22221224445668899999987778899999999998 9999999999
Q ss_pred CCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHH
Q 042102 82 LDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGT 161 (317)
Q Consensus 82 ~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~ 161 (317)
+||||+++|+++||.|+|+||+++.+||||++++||++.|+++++++.+++|.|.+.....+.++.|+||||||+|.||+
T Consensus 80 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~ 159 (331)
T 1xdw_A 80 TDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGR 159 (331)
T ss_dssp CTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHH
T ss_pred ccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999863112346789999999999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCC-CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc
Q 042102 162 AIAKRAEAFDCIIGYNSRTEKPNL-NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 162 ~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v 240 (317)
.+|+++++|||+|++||++..... ......++++++++||+|++|+|++++|+++|+++.|+.||+|+++||+|||+++
T Consensus 160 ~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~v 239 (331)
T 1xdw_A 160 VAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLV 239 (331)
T ss_dssp HHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGB
T ss_pred HHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccc
Confidence 999999999999999998765431 1123458999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCceEEEeeCCCCCCC--C--------Cc----ccCCC-CceEEcccCCCccHHHHHHHHHHHHHHHHH
Q 042102 241 DEHELVSALLQGRLGGAGLDVFEHEPD--V--------PE----ELIGL-ENVVLLPHVASATVETRKAMADLVVGNLQA 305 (317)
Q Consensus 241 d~~aL~~al~~g~i~ga~lDV~~~EP~--~--------~~----~L~~~-pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~ 305 (317)
|+++|+++|++|+|+||+||||++||+ + ++ |||++ |||++|||+||+|.+++.++.+.+++|+.+
T Consensus 240 d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~ 319 (331)
T 1xdw_A 240 DTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKD 319 (331)
T ss_dssp CHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999994 2 12 69999 999999999999999999999999999999
Q ss_pred HHCCCCCCCCCC
Q 042102 306 HFGKKPLLTPVV 317 (317)
Q Consensus 306 ~~~g~~~~~~v~ 317 (317)
|++|+++.|.|+
T Consensus 320 ~~~g~~~~~~v~ 331 (331)
T 1xdw_A 320 LAETGDCPNKIK 331 (331)
T ss_dssp HHHHSCCTTBCC
T ss_pred HHcCCCCCCCCC
Confidence 999999999885
No 19
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=3.7e-66 Score=487.71 Aligned_cols=307 Identities=22% Similarity=0.275 Sum_probs=267.8
Q ss_pred cEEEEeCC--CChhHHHHHHhcC---eEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCC--ceEEEECCC
Q 042102 8 IIVLMVCP--VSNYLEQEIEKSF---KVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPK--LEIVATCSV 80 (317)
Q Consensus 8 ~~vl~~~~--~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~--Lk~i~~~~~ 80 (317)
|||++... ......+.+.+.+ ++..... ... +.+.+.++++|+++++...++++++++++|+ ||||+++|+
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~-~~~-~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~ 79 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDK-LLT-PETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNV 79 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSS-CCC-TTTGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSS
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCC-CCc-HHHHHHhcCCcEEEEcCCCCCCHHHHHhccccCCeEEEECCc
Confidence 58888653 3344566776544 5543222 112 2344567899999987677899999999988 999999999
Q ss_pred CCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhH
Q 042102 81 GLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIG 160 (317)
Q Consensus 81 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG 160 (317)
|+|+||+++|+++||.|+|+||+++++||||+++++|++.|++.++++.+++|.|.+.. ..+.+++|+||||||+|.||
T Consensus 80 G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~l~g~~vgIiG~G~IG 158 (333)
T 1j4a_A 80 GVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAP-TIGREVRDQVVGVVGTGHIG 158 (333)
T ss_dssp CCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTT-CCBCCGGGSEEEEECCSHHH
T ss_pred ccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCC-cccccCCCCEEEEEccCHHH
Confidence 99999999999999999999999999999999999999999999999999999996422 35679999999999999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCC--CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 161 TAIAKRAEAFDCIIGYNSRTEKPNL--NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 161 ~~~a~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
+.+|+++++||++|++|+++..+.. ......++++++++||+|++|+|++++|+++|+++.|+.||+|+++||+|||+
T Consensus 159 ~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~ 238 (333)
T 1j4a_A 159 QVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGP 238 (333)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999998775421 12223489999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCceEEEeeCCCCCCC--CC--------c----ccCCCCceEEcccCCCccHHHHHHHHHHHHHHHH
Q 042102 239 LVDEHELVSALLQGRLGGAGLDVFEHEPD--VP--------E----ELIGLENVVLLPHVASATVETRKAMADLVVGNLQ 304 (317)
Q Consensus 239 ~vd~~aL~~al~~g~i~ga~lDV~~~EP~--~~--------~----~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~ 304 (317)
++|+++|+++|++|+|+||+||||++||. ++ + |||++|||++|||+|++|.+++.++.+.+++|+.
T Consensus 239 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (333)
T 1j4a_A 239 LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNL 318 (333)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999993 22 2 5999999999999999999999999999999999
Q ss_pred HHHCCCCCCCCCC
Q 042102 305 AHFGKKPLLTPVV 317 (317)
Q Consensus 305 ~~~~g~~~~~~v~ 317 (317)
+|++|+++.|.|+
T Consensus 319 ~~~~g~~~~~~v~ 331 (333)
T 1j4a_A 319 ELVEGKEAETPVK 331 (333)
T ss_dssp HHHTTCCCSSBCC
T ss_pred HHHcCCCCCcccc
Confidence 9999999998875
No 20
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=4.8e-66 Score=482.71 Aligned_cols=298 Identities=22% Similarity=0.310 Sum_probs=259.1
Q ss_pred CCCcEEEEeCCCC--hhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCC
Q 042102 5 SNNIIVLMVCPVS--NYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGL 82 (317)
Q Consensus 5 ~~~~~vl~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 82 (317)
++.|||++..+.. +.+.+.|++.++-+.+...++ . ...++|+++++. .++++++. |+||||++.|+|+
T Consensus 1 ~~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~--~----~~~~ad~~i~~~---~~~~~l~~-~~Lk~I~~~~aG~ 70 (315)
T 3pp8_A 1 SNAMEIIFYHPTFNAAWWVNALEKALPHARVREWKV--G----DNNPADYALVWQ---PPVEMLAG-RRLKAVFVLGAGV 70 (315)
T ss_dssp CCCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT--T----CCSCCSEEEESS---CCHHHHTT-CCCSEEEESSSCC
T ss_pred CCceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC--C----CccCcEEEEECC---CCHHHhCC-CCceEEEECCEec
Confidence 4568999988754 557778887764222211111 1 246899998863 58999999 9999999999999
Q ss_pred CcC-C-hhh---HhhCCcEEEeCCCCC-cHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEec
Q 042102 83 DKI-D-LAR---CKEKGIRVANTPDVL-TDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGM 156 (317)
Q Consensus 83 d~i-d-~~~---~~~~gI~v~n~~~~~-~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~ 156 (317)
||| | +++ +.++||.|+|+++++ +.+||||+++++|++.|++.++++.+++|.|... .+++++|+||||||+
T Consensus 71 d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~---~~~~l~g~tvGIiG~ 147 (315)
T 3pp8_A 71 DAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL---PEYTREEFSVGIMGA 147 (315)
T ss_dssp HHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CCCCSTTCCEEEECC
T ss_pred ccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC---CCCCcCCCEEEEEee
Confidence 999 7 876 788999999998764 7999999999999999999999999999999853 467899999999999
Q ss_pred ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccc---cCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEE
Q 042102 157 GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKY---YPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLIN 233 (317)
Q Consensus 157 G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~---~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN 233 (317)
|.||+.+|+++++|||+|++|+++++...+... ..++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 148 G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN 227 (315)
T 3pp8_A 148 GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLN 227 (315)
T ss_dssp SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEE
Confidence 999999999999999999999988765433322 25799999999999999999999999999999999999999999
Q ss_pred eCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCC
Q 042102 234 IGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPL 312 (317)
Q Consensus 234 ~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~ 312 (317)
+|||++||+++|+++|++|+|.||+||||++||++. +|||++|||++|||+||+|.+ .++.+.+++|+.+|++|+++
T Consensus 228 ~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~~~ 305 (315)
T 3pp8_A 228 LARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGEPV 305 (315)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTCCC
T ss_pred CCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999876 599999999999999999986 57999999999999999999
Q ss_pred CCCCC
Q 042102 313 LTPVV 317 (317)
Q Consensus 313 ~~~v~ 317 (317)
.|.|+
T Consensus 306 ~~~V~ 310 (315)
T 3pp8_A 306 TGQVD 310 (315)
T ss_dssp CCBCC
T ss_pred CceEC
Confidence 99875
No 21
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.4e-65 Score=474.25 Aligned_cols=300 Identities=34% Similarity=0.535 Sum_probs=267.9
Q ss_pred CCcEEEEeCCCChhHHHHHHh-cCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCc
Q 042102 6 NNIIVLMVCPVSNYLEQEIEK-SFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDK 84 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 84 (317)
++|||++++++.++..+.|++ .+++.. .. ...++.+.+.++++|+++++...++++++++++|+||||+++|+|+|+
T Consensus 2 ~~~~il~~~~~~~~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~ 79 (307)
T 1wwk_A 2 KRMKVLVAAPLHEKAIQVLKDAGLEVIY-EE-YPDEDRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDN 79 (307)
T ss_dssp --CEEEECSCCCHHHHHHHHHTTCEEEE-CS-SCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTCTTCCEEEESSSCCTT
T ss_pred CceEEEEeCCCCHHHHHHHHhCCeEEEe-CC-CCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCeEEEECCccccc
Confidence 468999999988888888876 455543 22 223344556688999999876667999999999999999999999999
Q ss_pred CChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHH
Q 042102 85 IDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIA 164 (317)
Q Consensus 85 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a 164 (317)
||+++|+++||.|+|+||+++.+||||+++++|++.|+++++++.+++|.|.+.. ..+.+++|+||||||+|.||+.+|
T Consensus 80 id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~l~g~~vgIiG~G~IG~~~A 158 (307)
T 1wwk_A 80 IDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKE-AMGIELEGKTIGIIGFGRIGYQVA 158 (307)
T ss_dssp BCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTT-CCBCCCTTCEEEEECCSHHHHHHH
T ss_pred cCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccC-cCCcccCCceEEEEccCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997422 246799999999999999999999
Q ss_pred HHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc
Q 042102 165 KRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 165 ~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v 240 (317)
+++++||++|++|+++.... .+.. ..++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++
T Consensus 159 ~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~v 237 (307)
T 1wwk_A 159 KIANALGMNILLYDPYPNEERAKEVNGK-FVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVV 237 (307)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGB
T ss_pred HHHHHCCCEEEEECCCCChhhHhhcCcc-ccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCccc
Confidence 99999999999999987542 2222 348999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCC
Q 042102 241 DEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGK 309 (317)
Q Consensus 241 d~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g 309 (317)
|+++|.++|++|+|.||++|||++||.+. +|||++||+++|||++++|.++..++.+.+++|+.+|++|
T Consensus 238 d~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 238 DTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp CHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999854 5999999999999999999999999999999999999976
No 22
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.8e-64 Score=473.84 Aligned_cols=307 Identities=30% Similarity=0.454 Sum_probs=273.9
Q ss_pred cEEEEeCCCChhHHHHHHhcCeEEEecCC-CChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCC-ceEEEECCCCCCcC
Q 042102 8 IIVLMVCPVSNYLEQEIEKSFKVFKLWHF-EDKEQFINTHKDSIQAVVGSAAAGADAELIESLPK-LEIVATCSVGLDKI 85 (317)
Q Consensus 8 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~-Lk~i~~~~~G~d~i 85 (317)
+||+++.++.++..+.|++.+++...... ...++.+.+.++++|+++++...++++++++++|+ ||||++.|+|+|+|
T Consensus 2 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~i 81 (320)
T 1gdh_A 2 KKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHI 81 (320)
T ss_dssp CEEEESSCCCHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCTTB
T ss_pred cEEEEcCCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhCCccceEEEECCcccccc
Confidence 58999998888888889887776543221 12344555668899999987767899999999999 99999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccC--cccccccccCCeEEEEecChhHHHH
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKG--EFKMTTKFTGKSVGILGMGRIGTAI 163 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~--~~~~~~~l~g~~vgIiG~G~iG~~~ 163 (317)
|+++|+++||.|+|+||+++.+||||+++++|++.|+++++++.+++|.|... ....+.++.|+||||||+|.||+.+
T Consensus 82 d~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~ 161 (320)
T 1gdh_A 82 DLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQAL 161 (320)
T ss_dssp CHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHH
T ss_pred cHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999621 1224679999999999999999999
Q ss_pred HHHHhhCCCEEEEeCC-CCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 164 AKRAEAFDCIIGYNSR-TEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 164 a~~l~~~G~~V~~~~~-~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
|+++++||++|++||+ +.... .+.....++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+
T Consensus 162 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~ 241 (320)
T 1gdh_A 162 AKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGD 241 (320)
T ss_dssp HHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred HHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999 76542 123333489999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q 042102 239 LVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTP 315 (317)
Q Consensus 239 ~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~ 315 (317)
++|+++|.++|++|+|.||++|||+.||...+|||++||+++|||++++|.+++.++.+.+ +|+.+|++|+++.+.
T Consensus 242 ~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~~~ 317 (320)
T 1gdh_A 242 LVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADMSY 317 (320)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCCTT
T ss_pred ccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCccc
Confidence 9999999999999999999999999999545699999999999999999999999999999 999999999988654
No 23
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=7.3e-65 Score=475.05 Aligned_cols=302 Identities=24% Similarity=0.396 Sum_probs=272.4
Q ss_pred CCcEEEEeCCCChhHHHHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCc
Q 042102 6 NNIIVLMVCPVSNYLEQEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDK 84 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 84 (317)
.+|||++++++.+...+.|++. +++.. .. ....+.+.+.++++|++++++..++++++++++|+||+|++.|+|+|+
T Consensus 4 ~~mkil~~~~~~~~~~~~l~~~~~~v~~-~~-~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~ 81 (313)
T 2ekl_A 4 YTVKALITDPIDEILIKTLREKGIQVDY-MP-EISKEELLNIIGNYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGLDN 81 (313)
T ss_dssp CCCEEEECSCCCHHHHHHHHHTTCEEEE-CT-TCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCCTT
T ss_pred cceEEEEECCCCHHHHHHHHhCCcEEEe-CC-CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCCCc
Confidence 3578999999888888888764 55542 21 223344556678999998876678999999999999999999999999
Q ss_pred CChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHH
Q 042102 85 IDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIA 164 (317)
Q Consensus 85 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a 164 (317)
||+++|+++||.|+|+||+++.+||||+++++|++.|+++++++.+++|.|.. ..+.+++|+||||||+|.||+.+|
T Consensus 82 id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~l~g~~vgIIG~G~IG~~~A 158 (313)
T 2ekl_A 82 IDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK---IEGLELAGKTIGIVGFGRIGTKVG 158 (313)
T ss_dssp BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC---CCCCCCTTCEEEEESCSHHHHHHH
T ss_pred cCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC---CCCCCCCCCEEEEEeeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999962 346789999999999999999999
Q ss_pred HHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc
Q 042102 165 KRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 165 ~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v 240 (317)
+++++||++|++||++.... .+.. ..++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++
T Consensus 159 ~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~v 237 (313)
T 2ekl_A 159 IIANAMGMKVLAYDILDIREKAEKINAK-AVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAV 237 (313)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGB
T ss_pred HHHHHCCCEEEEECCCcchhHHHhcCce-ecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCccc
Confidence 99999999999999987542 2232 358999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCceEEEeeCCCCCCCCCc---ccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCC
Q 042102 241 DEHELVSALLQGRLGGAGLDVFEHEPDVPE---ELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLL 313 (317)
Q Consensus 241 d~~aL~~al~~g~i~ga~lDV~~~EP~~~~---~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~ 313 (317)
|+++|.++|++|+|.||++|||+.||.+++ |||++|||++|||++++|.++.+++.+.+++|+.+|++|+++.
T Consensus 238 d~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l~ 313 (313)
T 2ekl_A 238 NGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGMI 313 (313)
T ss_dssp CHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999998877 8999999999999999999999999999999999999999863
No 24
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=2.4e-65 Score=489.79 Aligned_cols=295 Identities=22% Similarity=0.388 Sum_probs=259.9
Q ss_pred HHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeC--CCCCCHHHHhcCCCceEEEECCCCCCcCChhhHhhCCcEEE
Q 042102 22 QEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSA--AAGADAELIESLPKLEIVATCSVGLDKIDLARCKEKGIRVA 98 (317)
Q Consensus 22 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~--~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~ 98 (317)
+.|++. +++....+....++.+.+.++++|++++.. ..++++++|+++|+||+|+++|+|+||||+++|+++||.|+
T Consensus 61 ~~l~~~g~~v~~~~~~~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~ 140 (393)
T 2nac_A 61 KYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVA 140 (393)
T ss_dssp HHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEE
T ss_pred HHHHhCCCEEEEecCCCCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEE
Confidence 456553 455543322222334455678999988753 35799999999999999999999999999999999999999
Q ss_pred eCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcc-cccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEe
Q 042102 99 NTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEF-KMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYN 177 (317)
Q Consensus 99 n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~ 177 (317)
|++++++.+||||++++||++.|++.++++.+++|.|..... ..+.+++|+||||||+|.||+.+|+++++|||+|++|
T Consensus 141 n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~ 220 (393)
T 2nac_A 141 EVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYT 220 (393)
T ss_dssp ECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEE
T ss_pred eCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEE
Confidence 999999999999999999999999999999999999973211 2357899999999999999999999999999999999
Q ss_pred CCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 178 SRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 178 ~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
+++.... .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|.++|++|
T Consensus 221 d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 221 DRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp CSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred cCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 9876432 12333468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q 042102 253 RLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPV 316 (317)
Q Consensus 253 ~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 316 (317)
+|.||+||||++||.+. +|||++|||++|||+|+.|.+++.++...+++||.+|++|+++.|.+
T Consensus 301 ~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~ 365 (393)
T 2nac_A 301 RLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEY 365 (393)
T ss_dssp SEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGG
T ss_pred CeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 99999999999999765 59999999999999999999999999999999999999999998865
No 25
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.3e-65 Score=488.90 Aligned_cols=307 Identities=20% Similarity=0.311 Sum_probs=269.2
Q ss_pred CCcEEEEeCCCChhHHHHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeCC--CCCCHHHHhcCCCceEEEECCCCC
Q 042102 6 NNIIVLMVCPVSNYLEQEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSAA--AGADAELIESLPKLEIVATCSVGL 82 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~--~~~~~~~l~~~~~Lk~i~~~~~G~ 82 (317)
.+|+||+.+...+.+.+.|++. +++..........+.+.+.++++|+++++.. .++++++++++|+||+|+++|+|+
T Consensus 16 ~~~~vl~~d~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 95 (364)
T 2j6i_A 16 DEEKLYGCTENKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGS 95 (364)
T ss_dssp HCTTCTTBTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEESSSCC
T ss_pred cCceEEEecCccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEECCccc
Confidence 4678888888777777777763 6665433221123344566788999887542 468999999999999999999999
Q ss_pred CcCChhhHhhC--CcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcc-cccccccCCeEEEEecChh
Q 042102 83 DKIDLARCKEK--GIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEF-KMTTKFTGKSVGILGMGRI 159 (317)
Q Consensus 83 d~id~~~~~~~--gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-~~~~~l~g~~vgIiG~G~i 159 (317)
||||+++|+++ ||.|+|+||+++.+||||++++||++.|++.++++.+++|.|..... ..+.+++|+||||||+|.|
T Consensus 96 d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~I 175 (364)
T 2j6i_A 96 DHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRI 175 (364)
T ss_dssp TTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHH
T ss_pred ccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHH
Confidence 99999999999 99999999999999999999999999999999999999999973211 2467899999999999999
Q ss_pred HHHHHHHHhhCCCE-EEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEE
Q 042102 160 GTAIAKRAEAFDCI-IGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLIN 233 (317)
Q Consensus 160 G~~~a~~l~~~G~~-V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN 233 (317)
|+.+|+++++|||+ |++||++..+. .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 176 G~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn 255 (364)
T 2j6i_A 176 GYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVN 255 (364)
T ss_dssp HHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEE
Confidence 99999999999997 99999876432 2333345899999999999999999999999999999999999999999
Q ss_pred eCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCC--C---ceEEcccCCCccHHHHHHHHHHHHHHHHHHH
Q 042102 234 IGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGL--E---NVVLLPHVASATVETRKAMADLVVGNLQAHF 307 (317)
Q Consensus 234 ~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~--p---nvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~ 307 (317)
+|||+++|+++|+++|++|+|+||+||||++||++. +|||.+ | ||++|||+||+|.++..++...+++|+.+|+
T Consensus 256 ~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~ 335 (364)
T 2j6i_A 256 TARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESFF 335 (364)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999875 589999 9 9999999999999999999999999999999
Q ss_pred CCCCC
Q 042102 308 GKKPL 312 (317)
Q Consensus 308 ~g~~~ 312 (317)
+|+++
T Consensus 336 ~g~~~ 340 (364)
T 2j6i_A 336 TGKFD 340 (364)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 99944
No 26
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=8.9e-64 Score=473.13 Aligned_cols=312 Identities=24% Similarity=0.324 Sum_probs=268.8
Q ss_pred CCCcEEEEeCCCC-hhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCC
Q 042102 5 SNNIIVLMVCPVS-NYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLD 83 (317)
Q Consensus 5 ~~~~~vl~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d 83 (317)
+.||+|++.+... +..++.++..+++..+ +....+++.++...++|+++++...++++++++++|+||+|+++|+|+|
T Consensus 19 ~~kp~i~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d 97 (347)
T 1mx3_A 19 SHMPLVALLDGRDCTVEMPILKDVATVAFC-DAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFD 97 (347)
T ss_dssp --CCEEEESSCSCCTTTHHHHTTTCEEEEC-CCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSCCEEEESSSCCT
T ss_pred CCCCEEEEEcCCcchhhHHHhhccceEEec-CCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCCCEEEEcccccC
Confidence 4589999998432 2235677776766654 3332334433334567888877777899999999999999999999999
Q ss_pred cCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcc-----cc-cccccCCeEEEEecC
Q 042102 84 KIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEF-----KM-TTKFTGKSVGILGMG 157 (317)
Q Consensus 84 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-----~~-~~~l~g~~vgIiG~G 157 (317)
+||+++|+++||.|+|+||+++++||||++++||+++|++..+++.+++|.|..... .. +.+++|+||||||+|
T Consensus 98 ~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G 177 (347)
T 1mx3_A 98 NIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLG 177 (347)
T ss_dssp TBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCS
T ss_pred cccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeEC
Confidence 999999999999999999999999999999999999999999999999999963211 01 268999999999999
Q ss_pred hhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEE
Q 042102 158 RIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLIN 233 (317)
Q Consensus 158 ~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN 233 (317)
.||+.+|+++++||++|++||++..+. .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 178 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN 257 (347)
T 1mx3_A 178 RVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVN 257 (347)
T ss_dssp HHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEE
Confidence 999999999999999999999876432 1223345899999999999999999999999999999999999999999
Q ss_pred eCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC--cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 042102 234 IGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP--EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKP 311 (317)
Q Consensus 234 ~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~--~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 311 (317)
+|||+++|+++|.++|++|+|.||++|||+.||.+. ++||.+||+++|||+|++|.++..++.+.+++|+.+|++|++
T Consensus 258 ~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~ 337 (347)
T 1mx3_A 258 TARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRI 337 (347)
T ss_dssp CSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999763 589999999999999999999999999999999999999987
Q ss_pred CC---CCCC
Q 042102 312 LL---TPVV 317 (317)
Q Consensus 312 ~~---~~v~ 317 (317)
+. |.|+
T Consensus 338 ~~~l~~~v~ 346 (347)
T 1mx3_A 338 PDSLKNCVN 346 (347)
T ss_dssp TTTCSSBCC
T ss_pred CcccCCCCC
Confidence 65 5553
No 27
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=8.5e-63 Score=464.76 Aligned_cols=308 Identities=32% Similarity=0.486 Sum_probs=276.3
Q ss_pred CCcEEEEeCCCChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcC
Q 042102 6 NNIIVLMVCPVSNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKI 85 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 85 (317)
||+|||+++++.++..+.|++.+++.... ....+.+.+.++++|++++++..++++++++++|+||+|++.|+|+|+|
T Consensus 1 m~~~il~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 78 (333)
T 2d0i_A 1 MRPKVGVLLKMKREALEELKKYADVEIIL--YPSGEELKGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNI 78 (333)
T ss_dssp CCSEEEECSCCCHHHHHHHHTTSEEEECC--SCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTB
T ss_pred CCcEEEEECCCCHHHHHHHHhcCCEEEeC--CCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhCCCceEEEECCcccccc
Confidence 36899999998888888998877766532 2233444556789999987777789999999999999999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCc-cccc----ccccCCeEEEEecChhH
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGE-FKMT----TKFTGKSVGILGMGRIG 160 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~-~~~~----~~l~g~~vgIiG~G~iG 160 (317)
|+++|+++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.... ...+ .+++|++|||||+|.||
T Consensus 79 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG 158 (333)
T 2d0i_A 79 DLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIG 158 (333)
T ss_dssp CHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHH
T ss_pred cHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHH
Confidence 999999999999999999999999999999999999999999999999996311 1235 78999999999999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 161 TAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 161 ~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
+.+|++++++|++|++||++.... .+.. ..++++++++||+|++|+|.+++|+++++++.++.||+| ++||+||
T Consensus 159 ~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 159 KAIARRLIPFGVKLYYWSRHRKVNVEKELKAR-YMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp HHHHHHHGGGTCEEEEECSSCCHHHHHHHTEE-ECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred HHHHHHHHHCCCEEEEECCCcchhhhhhcCce-ecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence 999999999999999999987542 1222 348999999999999999999999999999999999999 9999999
Q ss_pred CcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCC-ceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q 042102 237 GLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLE-NVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTP 315 (317)
Q Consensus 237 g~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~p-nvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~ 315 (317)
|.++|+++|.++|++|+|.||++|||++||.+.++||++| ||++|||+++.|.++..++.+.+++|+.+|++|+++.|.
T Consensus 237 g~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~ 316 (333)
T 2d0i_A 237 GALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDL 316 (333)
T ss_dssp GGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTB
T ss_pred CcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCc
Confidence 9999999999999999999999999999997766999999 999999999999999999999999999999999999887
Q ss_pred CC
Q 042102 316 VV 317 (317)
Q Consensus 316 v~ 317 (317)
|+
T Consensus 317 v~ 318 (333)
T 2d0i_A 317 VN 318 (333)
T ss_dssp SC
T ss_pred cC
Confidence 75
No 28
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.7e-63 Score=460.67 Aligned_cols=291 Identities=23% Similarity=0.299 Sum_probs=261.7
Q ss_pred cEEEEeCCCChhHHHHHHhc-CeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcCC
Q 042102 8 IIVLMVCPVSNYLEQEIEKS-FKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKID 86 (317)
Q Consensus 8 ~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 86 (317)
||||++.++.+...+.|++. +++. .+.++++|+++++. .+.++++++|+||||+++|+|+|+||
T Consensus 1 m~il~~~~~~~~~~~~l~~~~~~v~------------~~~~~~~d~~i~~~---~~~~~l~~~~~Lk~I~~~~~G~d~id 65 (303)
T 1qp8_A 1 MELYVNFELPPEAEEELRKYFKIVR------------GGDLGNVEAALVSR---ITAEELAKMPRLKFIQVVTAGLDHLP 65 (303)
T ss_dssp CEEECCSCCCHHHHHHHHTTCEEEC------------SSCCTTBCCCCBSC---CCHHHHHHCTTCCCEEBSSSCCTTSC
T ss_pred CEEEEccCCCHHHHHHHHhcCCccc------------hhhhCCCEEEEECC---CCHHHHhhCCCCcEEEECCcCccccc
Confidence 48999999888888888764 3221 13467889888753 46799999999999999999999999
Q ss_pred hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHHH
Q 042102 87 LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKR 166 (317)
Q Consensus 87 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~ 166 (317)
++++ ++||.|+|++|+++.+||||++++||++.|++.++++.+++|.|... ....+++|+||||||+|.||+.+|++
T Consensus 66 ~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~--~~~~~l~g~~vgIIG~G~IG~~~A~~ 142 (303)
T 1qp8_A 66 WESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD--VEIPLIQGEKVAVLGLGEIGTRVGKI 142 (303)
T ss_dssp CTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--SCCCCCTTCEEEEESCSTHHHHHHHH
T ss_pred HHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCC--CCCCCCCCCEEEEEccCHHHHHHHHH
Confidence 9885 79999999999999999999999999999999999999999999642 12358999999999999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHH
Q 042102 167 AEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELV 246 (317)
Q Consensus 167 l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~ 246 (317)
+++||++|++|+++.. ..+.....++++++++||+|++|+|++++|+++|+++.|+.||+|+++||+|||+++|+++|.
T Consensus 143 l~~~G~~V~~~dr~~~-~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~ 221 (303)
T 1qp8_A 143 LAALGAQVRGFSRTPK-EGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVL 221 (303)
T ss_dssp HHHTTCEEEEECSSCC-CSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHH
T ss_pred HHHCCCEEEEECCCcc-ccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHH
Confidence 9999999999998775 223334568999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceEEEeeCC-CCCCCCC-cccCCCCceEEcccCCCc--cHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 247 SALLQGRLGGAGLDVF-EHEPDVP-EELIGLENVVLLPHVASA--TVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 247 ~al~~g~i~ga~lDV~-~~EP~~~-~~L~~~pnvi~tPH~a~~--t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
++|++|+|.||++||| ++||++. +|||++||+++|||+||+ |.++++++.+.+++|+.+|++|+++.|.|+
T Consensus 222 ~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~ 296 (303)
T 1qp8_A 222 RILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGRPRNIAK 296 (303)
T ss_dssp HHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSCCSCBCC
T ss_pred HHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceeC
Confidence 9999999999999999 8899875 589999999999999998 999999999999999999999999988875
No 29
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=1.1e-62 Score=466.59 Aligned_cols=309 Identities=26% Similarity=0.411 Sum_probs=270.5
Q ss_pred CcEEEEeCC-C--ChhHHHHHHhcCeEEEecCCCChHHHHhhccC-----CceEEEEe------CCCCCCHHHHhcCC-C
Q 042102 7 NIIVLMVCP-V--SNYLEQEIEKSFKVFKLWHFEDKEQFINTHKD-----SIQAVVGS------AAAGADAELIESLP-K 71 (317)
Q Consensus 7 ~~~vl~~~~-~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ii~~------~~~~~~~~~l~~~~-~ 71 (317)
+||||++++ . .+..++.|++.+++..+. ..+.++++ +.+. ++|+++.. ...++++++|+++| +
T Consensus 3 ~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~ 80 (348)
T 2w2k_A 3 RPRVLLLGDPARHLDDLWSDFQQKFEVIPAN-LTTHDGFK-QALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSS 80 (348)
T ss_dssp CCEEEECSSCCSSCHHHHHHHHHHSEEEECC-CCCHHHHH-HHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTT
T ss_pred CcEEEEECCccccChHHHHHHHhcceEEecC-CCCHHHHH-HHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccC
Confidence 689999987 4 355677888778876533 22233443 3333 78888764 24589999999998 6
Q ss_pred ceEEEECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCC---CccCc---cccccc
Q 042102 72 LEIVATCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGE---WKKGE---FKMTTK 145 (317)
Q Consensus 72 Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~---w~~~~---~~~~~~ 145 (317)
||+|+++|+|+||||+++|+++||.|+|+||+++.+||||++++||+++|++.++++.+++|. |.... ...+.+
T Consensus 81 Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~ 160 (348)
T 2w2k_A 81 LKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHN 160 (348)
T ss_dssp CCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCC
T ss_pred ceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999 94211 124678
Q ss_pred ccCCeEEEEecChhHHHHHHHHh-hCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAE-AFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~-~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
++|++|||||+|.||+.+|++++ +||++|++||++.... .+.....++++++++||+|++|+|.+++|++++++
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~ 240 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDE 240 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCH
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhH
Confidence 99999999999999999999999 9999999999876532 13333458999999999999999999999999999
Q ss_pred HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHH
Q 042102 220 QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLV 299 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~ 299 (317)
+.++.||+|++|||+|||+++|+++|.++|++|+|.||++|||++||...++||++|||++|||+|+.|.++..++.+.+
T Consensus 241 ~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~ 320 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHEFERLT 320 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999555689999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCC
Q 042102 300 VGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 300 ~~nl~~~~~g~~~~~~v~ 317 (317)
++|+.+|++|+++.|.|+
T Consensus 321 ~~ni~~~~~g~~~~~~v~ 338 (348)
T 2w2k_A 321 MTNIDRFLLQGKPLLTPA 338 (348)
T ss_dssp HHHHHHHHHTCCCCSSBC
T ss_pred HHHHHHHHcCCCCcceec
Confidence 999999999999988875
No 30
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=2.6e-62 Score=461.79 Aligned_cols=310 Identities=42% Similarity=0.604 Sum_probs=276.7
Q ss_pred CcEEEEeCCCChhHHHHHHhcCeEEEecCC-CChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcC
Q 042102 7 NIIVLMVCPVSNYLEQEIEKSFKVFKLWHF-EDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKI 85 (317)
Q Consensus 7 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 85 (317)
++||+++.++.+...+.|++.+++...... +..++.+.+.+.++|+++++...++++++++++|+||||++.|+|+|+|
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 81 (334)
T 2dbq_A 2 KPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNI 81 (334)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTB
T ss_pred CcEEEEecCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhCCCceEEEECCcccccc
Confidence 468999998888888889887877653322 1234455566889999998776789999999999999999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCc----c-C-cccccccccCCeEEEEecChh
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWK----K-G-EFKMTTKFTGKSVGILGMGRI 159 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~----~-~-~~~~~~~l~g~~vgIiG~G~i 159 (317)
|+++++++||.|+|+||+++.+||||+++++|++.|+++++++.+++|.|. . . ....+.++.|++|||||+|.|
T Consensus 82 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~i 161 (334)
T 2dbq_A 82 DIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRI 161 (334)
T ss_dssp CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHH
T ss_pred cHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHH
Confidence 999999999999999999999999999999999999999999999999995 1 1 112367899999999999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeC
Q 042102 160 GTAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 160 G~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
|+.+|++++++|++|++|+++.... .+. ...++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|
T Consensus 162 G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~-~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 162 GQAIAKRAKGFNMRILYYSRTRKEEVERELNA-EFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCC-EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHhCCCEEEEECCCcchhhHhhcCc-ccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 9999999999999999999987541 122 23589999999999999999999999999999999999999999999
Q ss_pred CCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q 042102 236 RGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTP 315 (317)
Q Consensus 236 rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~ 315 (317)
||.++|+++|.++|++|+|.||++|||++||...++||++|||++|||+|+.|.++..++.+.+++|+.+|++|+++.|.
T Consensus 241 rg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~ 320 (334)
T 2dbq_A 241 RGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPTL 320 (334)
T ss_dssp CGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCTTB
T ss_pred CCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCccc
Confidence 99999999999999999999999999999994445999999999999999999999999999999999999999999888
Q ss_pred CC
Q 042102 316 VV 317 (317)
Q Consensus 316 v~ 317 (317)
|+
T Consensus 321 v~ 322 (334)
T 2dbq_A 321 VN 322 (334)
T ss_dssp SC
T ss_pred cC
Confidence 75
No 31
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=4.5e-62 Score=459.53 Aligned_cols=313 Identities=30% Similarity=0.464 Sum_probs=276.8
Q ss_pred CCCCcEEEEeCCCChhHHHHHHhc--CeEEEecCC-CChHHHHhhccCCceEEEEeCCCCCCHHHHhcC-CCceEEEECC
Q 042102 4 NSNNIIVLMVCPVSNYLEQEIEKS--FKVFKLWHF-EDKEQFINTHKDSIQAVVGSAAAGADAELIESL-PKLEIVATCS 79 (317)
Q Consensus 4 ~~~~~~vl~~~~~~~~~~~~l~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~-~~Lk~i~~~~ 79 (317)
++++|||++++++.+...+.|++. +++...... ....+.+.+.++++|++++++..++++++++++ |+||||++.|
T Consensus 5 ~~~~~~il~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~ 84 (330)
T 2gcg_A 5 PVRLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMS 84 (330)
T ss_dssp --CCEEEEESSCCCHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECC
Confidence 345789999998888888888876 666543211 123445556678999998877778999999999 9999999999
Q ss_pred CCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCcc-C-cccccccccCCeEEEEecC
Q 042102 80 VGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKK-G-EFKMTTKFTGKSVGILGMG 157 (317)
Q Consensus 80 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~-~-~~~~~~~l~g~~vgIiG~G 157 (317)
+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.. . ....+.+++|++|||||+|
T Consensus 85 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G 164 (330)
T 2gcg_A 85 VGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLG 164 (330)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCS
T ss_pred cccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcC
Confidence 9999999999999999999999999999999999999999999999999999999963 1 1224678999999999999
Q ss_pred hhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEE
Q 042102 158 RIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLI 232 (317)
Q Consensus 158 ~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlV 232 (317)
.||+.+|++++++|++|++|+++.... .+... .++++++++||+|++|+|.+++|+++++++.++.||+|+++|
T Consensus 165 ~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailI 243 (330)
T 2gcg_A 165 RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEF-VSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFI 243 (330)
T ss_dssp HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCcee-CCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEE
Confidence 999999999999999999999875421 12222 389999999999999999999999999999999999999999
Q ss_pred EeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 042102 233 NIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKP 311 (317)
Q Consensus 233 N~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 311 (317)
|+|||.++|+++|.++|++|++.|+++|||++||+++ ++||++|||++|||+|+.|.++..++...+++|+.+|++|++
T Consensus 244 n~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~ 323 (330)
T 2gcg_A 244 NISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEP 323 (330)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999765 589999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 042102 312 LLTPVV 317 (317)
Q Consensus 312 ~~~~v~ 317 (317)
+.|.|+
T Consensus 324 ~~~~v~ 329 (330)
T 2gcg_A 324 MPSELK 329 (330)
T ss_dssp CTTEEC
T ss_pred CCCCCC
Confidence 998875
No 32
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=7.9e-62 Score=462.39 Aligned_cols=280 Identities=22% Similarity=0.304 Sum_probs=246.8
Q ss_pred CCcEEEEeCCCChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcC
Q 042102 6 NNIIVLMVCPVSNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKI 85 (317)
Q Consensus 6 ~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 85 (317)
+.||||+.+.+ +...+.+++..++......+... +.+.++|++++++.+++++++++ .++||||+++|+|+|||
T Consensus 2 ~mmkIl~~~~~-p~~~~~~~~~~~v~~~~~~~~~~----~~l~~ad~li~~~~~~v~~~ll~-~~~Lk~I~~~~~G~D~i 75 (381)
T 3oet_A 2 NAMKILVDENM-PYARELFSRLGEVKAVPGRPIPV----EELNHADALMVRSVTKVNESLLS-GTPINFVGTATAGTDHV 75 (381)
T ss_dssp CCCEEEEETTS-TTHHHHHTTSSEEEEECC---CH----HHHTTCSEEEECTTSCBSHHHHT-TSCCCEEEESSSCCTTB
T ss_pred CceEEEECCCC-cHHHHHHhhCCcEEEeCCCCCCH----HHHCCCEEEEECCCCCCCHHHHc-CCCCEEEEEcccccccc
Confidence 44899998876 45566777767666532221122 33678999999877889999999 57799999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHH
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAK 165 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~ 165 (317)
|+++|+++||.|+|+||+++.+||||+++++|++.|+. +.+++|+||||||+|.||+.+|+
T Consensus 76 D~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~-------------------g~~l~gktvGIIGlG~IG~~vA~ 136 (381)
T 3oet_A 76 DEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD-------------------GFSLRDRTIGIVGVGNVGSRLQT 136 (381)
T ss_dssp CHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT-------------------TCCGGGCEEEEECCSHHHHHHHH
T ss_pred CHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc-------------------CCccCCCEEEEEeECHHHHHHHH
Confidence 99999999999999999999999999999999998863 34699999999999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChh----hhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 166 RAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEE----TQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 166 ~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~----t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
++++|||+|++||+............++++++++||+|++|+|++++ |+++|+++.|+.||+|++|||+|||++||
T Consensus 137 ~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvd 216 (381)
T 3oet_A 137 RLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVD 216 (381)
T ss_dssp HHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccC
Confidence 99999999999998543222233467899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCC
Q 042102 242 EHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKP 311 (317)
Q Consensus 242 ~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 311 (317)
+++|+++|++|++.||+||||++||+++++||.++ +++|||+||+|.|+..++..++++|+.+|+++.+
T Consensus 217 e~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 217 NAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp HHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999888899875 8999999999999999999999999999998754
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=2.2e-60 Score=473.52 Aligned_cols=309 Identities=28% Similarity=0.413 Sum_probs=277.3
Q ss_pred CCCcEEEEeCCCChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCc
Q 042102 5 SNNIIVLMVCPVSNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDK 84 (317)
Q Consensus 5 ~~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 84 (317)
+.+||||+++++.+...+.|++.+++.... .. ..+.+.+.++++|++++++.+++++++++++|+||||+++|+|+||
T Consensus 2 m~~~~vl~~~~~~~~~~~~l~~~~~v~~~~-~~-~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 79 (529)
T 1ygy_A 2 VSLPVVLIADKLAPSTVAALGDQVEVRWVD-GP-DRDKLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDN 79 (529)
T ss_dssp -CCCEEEECSSCCGGGGTTSCSSSEEEECC-TT-SHHHHHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCCTT
T ss_pred CCCcEEEEeCCCCHHHHHHHhcCceEEEcC-CC-CHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCcEEEECCcCcCc
Confidence 457899999998888777777767766532 22 3344556678999999887789999999999999999999999999
Q ss_pred CChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHH
Q 042102 85 IDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIA 164 (317)
Q Consensus 85 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a 164 (317)
||+++|+++||.|+|+|++++.+||||++++||+++|+++++++.+++|.|.+.. ..+.+++|+||||||+|.||+++|
T Consensus 80 id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~-~~~~~l~g~~vgIIG~G~IG~~vA 158 (529)
T 1ygy_A 80 VDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSS-FSGTEIFGKTVGVVGLGRIGQLVA 158 (529)
T ss_dssp BCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGG-CCBCCCTTCEEEEECCSHHHHHHH
T ss_pred cCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccC-cCccccCCCEEEEEeeCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997532 247899999999999999999999
Q ss_pred HHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc
Q 042102 165 KRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 165 ~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v 240 (317)
++|+++|++|++||++.... .+... .++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||.++
T Consensus 159 ~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv 237 (529)
T 1ygy_A 159 QRIAAFGAYVVAYDPYVSPARAAQLGIEL-LSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLV 237 (529)
T ss_dssp HHHHTTTCEEEEECTTSCHHHHHHHTCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSB
T ss_pred HHHHhCCCEEEEECCCCChhHHHhcCcEE-cCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchh
Confidence 99999999999999876321 12222 38999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q 042102 241 DEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPLLTPVV 317 (317)
Q Consensus 241 d~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 317 (317)
|+++|+++|++|++.||++|||+.||...++||++||+++|||+++.|.++++++...+++|+.+|++|+++.+.|+
T Consensus 238 ~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~ 314 (529)
T 1ygy_A 238 DEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVN 314 (529)
T ss_dssp CHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCS
T ss_pred hHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999999999877799999999999999999999999999999999999999998777653
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.1e-60 Score=441.25 Aligned_cols=279 Identities=23% Similarity=0.297 Sum_probs=243.4
Q ss_pred EEEEeCCCChhHHHHHH---hcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcC
Q 042102 9 IVLMVCPVSNYLEQEIE---KSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKI 85 (317)
Q Consensus 9 ~vl~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 85 (317)
+|.+..++.....+... +.+....+ +.++++|+++++ ...+ ++|+||||+++|+|+|+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~ad~li~~-~~~~------~~~~Lk~I~~~~~G~d~i 63 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGFDLHWY-----------PDYYDAEAQVIK-DRYV------LGKRTKMIQAISAGVDHI 63 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTSCEEET-----------TSCCCCSEEEES-SCCC------CCSSCCEEEECSSCCTTS
T ss_pred ceEEecCCcchHHHHHHHHhcccccccC-----------cchhhhhhhhhh-hhhh------hhhhhHHHHHHhcCCcee
Confidence 56677777665544333 23443321 346789999883 3332 789999999999999999
Q ss_pred ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHH
Q 042102 86 DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAK 165 (317)
Q Consensus 86 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~ 165 (317)
|+++|++++|.++| +|.++.+||||+++++|++.|++.++++.+++|.|.+.. ..+++|+||||||+|.||+++|+
T Consensus 64 d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~---~~~l~g~tvGIIGlG~IG~~vA~ 139 (290)
T 3gvx_A 64 DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP---TTLLYGKALGILGYGGIGRRVAH 139 (290)
T ss_dssp CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC---CCCCTTCEEEEECCSHHHHHHHH
T ss_pred ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC---ceeeecchheeeccCchhHHHHH
Confidence 99999987766655 588999999999999999999999999999999998532 36899999999999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHH
Q 042102 166 RAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHEL 245 (317)
Q Consensus 166 ~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL 245 (317)
++++|||+|++||++...........++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|
T Consensus 140 ~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL 219 (290)
T 3gvx_A 140 LAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDM 219 (290)
T ss_dssp HHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHH
T ss_pred HHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcch
Confidence 99999999999999876554444556899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCC-CccHHHHHHHHHHHHHHHHHHHCCCC
Q 042102 246 VSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVA-SATVETRKAMADLVVGNLQAHFGKKP 311 (317)
Q Consensus 246 ~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a-~~t~~~~~~~~~~~~~nl~~~~~g~~ 311 (317)
+++|++|++.||++|||++||. +|||++|||++|||+| ++|.++.+++.+.+++||.+|++|+.
T Consensus 220 ~~aL~~g~i~ga~lDV~~~EP~--~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 220 IGFLKERSDVWYLSDVWWNEPE--ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp HHHHHHCTTCEEEESCCTTTTS--CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred hhhhhhccceEEeeccccCCcc--cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999999999998 8999999999999999 89999999999999999999999874
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.7e-59 Score=443.12 Aligned_cols=279 Identities=19% Similarity=0.288 Sum_probs=244.8
Q ss_pred cEEEEeCCCChhHHHHHHhcCeEEEecCCCChHHHHhhccCCceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcCCh
Q 042102 8 IIVLMVCPVSNYLEQEIEKSFKVFKLWHFEDKEQFINTHKDSIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKIDL 87 (317)
Q Consensus 8 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~ 87 (317)
|||++.+..+ ...+.+++..++...... +...+.++++|++++++.+++++++++ +|+||||+++++|+||||+
T Consensus 1 mkil~~~~~~-~~~~~~~~~~~v~~~~~~----~~~~~~l~~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D~iD~ 74 (380)
T 2o4c_A 1 MRILADENIP-VVDAFFADQGSIRRLPGR----AIDRAALAEVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTDHLDL 74 (380)
T ss_dssp CEEEEETTCT-THHHHHGGGSEEEEECGG----GCSTTTTTTCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCSTTBCH
T ss_pred CEEEEecCch-HHHHHHHhCCcEEEecCC----cCChHHHCCcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccchhhH
Confidence 5888887654 455666666665542211 112234688999998877889999999 8999999999999999999
Q ss_pred hhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHHHH
Q 042102 88 ARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRA 167 (317)
Q Consensus 88 ~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l 167 (317)
++++++||.|+|+||+++.+||||+++++|++.|+. +.+++|+||||||+|+||+.+|++|
T Consensus 75 ~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~-------------------~~~l~g~tvGIIGlG~IG~~vA~~l 135 (380)
T 2o4c_A 75 DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR-------------------GADLAERTYGVVGAGQVGGRLVEVL 135 (380)
T ss_dssp HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH-------------------TCCGGGCEEEEECCSHHHHHHHHHH
T ss_pred HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh-------------------hcccCCCEEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999999999873 2469999999999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChh----hhccccHHHHhccCCCcEEEEeCCCcccCHH
Q 042102 168 EAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEE----TQHIVNRQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 168 ~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~----t~~li~~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
++||++|++||++...........++++++++||+|++|+|++++ |+++++++.|+.||+|+++||+|||+++|++
T Consensus 136 ~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~ 215 (380)
T 2o4c_A 136 RGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQ 215 (380)
T ss_dssp HHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHH
T ss_pred HHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHH
Confidence 999999999997643221112356899999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHHHHHHHHCCCCC
Q 042102 244 ELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVGNLQAHFGKKPL 312 (317)
Q Consensus 244 aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~ 312 (317)
+|+++|++|+|.||+||||++||.++++|+. +|+++|||+||+|.++..++...+++|+.+|++|++.
T Consensus 216 aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~ 283 (380)
T 2o4c_A 216 ALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAER 283 (380)
T ss_dssp HHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999987778887 4999999999999999999999999999999999863
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=2.6e-37 Score=302.39 Aligned_cols=222 Identities=14% Similarity=0.160 Sum_probs=189.8
Q ss_pred CCceEEE-ECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccC
Q 042102 70 PKLEIVA-TCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTG 148 (317)
Q Consensus 70 ~~Lk~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g 148 (317)
|+++.|+ .+++|+|++ +++.++||.++|++++++ +|||+. +|++....+.+..| |.+ ..+.++.|
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~---~~g~~L~G 277 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR---ATDVMIAG 277 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH---HHCCCCTT
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh---ccccccCC
Confidence 8899998 889999998 789999999999999999 999953 47776665555556 753 23568999
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
++|||||+|.||+.+|+++++||++|+++++++... .++ ...++++++++||+|++|+ .|+++|+++.|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~ 352 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY-RVVTMEYAADKADIFVTAT----GNYHVINHDHMK 352 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECS----SSSCSBCHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCC-EeCCHHHHHhcCCEEEECC----CcccccCHHHHh
Confidence 999999999999999999999999999999886432 122 2458999999999999997 588999999999
Q ss_pred ccCCCcEEEEeCCCcc-cCHHHHHHHHHhCCceEEEeeCCCCCCCCC-cccCCC--CceEEcccCC-CccHH-HHHHHHH
Q 042102 224 ALGPKGVLINIGRGLL-VDEHELVSALLQGRLGGAGLDVFEHEPDVP-EELIGL--ENVVLLPHVA-SATVE-TRKAMAD 297 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~-vd~~aL~~al~~g~i~ga~lDV~~~EP~~~-~~L~~~--pnvi~tPH~a-~~t~~-~~~~~~~ 297 (317)
.||+|++|||+|||++ ||+++| ++|++|+|+ +++|| ||+++ +|||.+ ||+++| |+| |++.+ ...+++.
T Consensus 353 ~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~ 426 (494)
T 3d64_A 353 AMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTN 426 (494)
T ss_dssp HCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHH
T ss_pred hCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHH
Confidence 9999999999999999 699999 999999997 55555 46554 589988 999999 999 66754 6788999
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q 042102 298 LVVGNLQAHFGKKPLLTPV 316 (317)
Q Consensus 298 ~~~~nl~~~~~g~~~~~~v 316 (317)
.+++|+..|++|+++.+.|
T Consensus 427 ~~~~ni~~~~~g~~~~n~V 445 (494)
T 3d64_A 427 QTLAQIELFTRGGEYANKV 445 (494)
T ss_dssp HHHHHHHHHHHGGGSCSSE
T ss_pred HHHHHHHHHHcCCCCCCce
Confidence 9999999999999988876
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=6.3e-37 Score=298.71 Aligned_cols=225 Identities=13% Similarity=0.141 Sum_probs=196.4
Q ss_pred CCCceEEE-ECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCccccccccc
Q 042102 69 LPKLEIVA-TCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFT 147 (317)
Q Consensus 69 ~~~Lk~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~ 147 (317)
+|+++.|+ .+++|+|++ +++.++||.++|+++++. +|+| +++|++..+.+.+++| |.+ ..+.++.
T Consensus 191 ~~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r---~~~~~l~ 256 (479)
T 1v8b_A 191 AKKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR---ATDFLIS 256 (479)
T ss_dssp HTTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH---HHCCCCT
T ss_pred hcCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh---ccccccC
Confidence 47899998 889999998 789999999999999999 9999 3468888888888888 863 2356899
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
|++|||||+|.||+.+|+++++||++|+++++++... .++ ...++++++++||+|++|+ .|+++|+++.|
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l 331 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVVTLDEIVDKGDFFITCT----GNVDVIKLEHL 331 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECC----SSSSSBCHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCC-EecCHHHHHhcCCEEEECC----ChhhhcCHHHH
Confidence 9999999999999999999999999999999886432 222 3468999999999999995 68999999999
Q ss_pred hccCCCcEEEEeCCCcc-cCHHHHHH--HHHhCCceEEEeeCCCCCCCCCcccCCC--CceEEcccCC-CccHH-HHHHH
Q 042102 223 NALGPKGVLINIGRGLL-VDEHELVS--ALLQGRLGGAGLDVFEHEPDVPEELIGL--ENVVLLPHVA-SATVE-TRKAM 295 (317)
Q Consensus 223 ~~mk~gavlVN~~rg~~-vd~~aL~~--al~~g~i~ga~lDV~~~EP~~~~~L~~~--pnvi~tPH~a-~~t~~-~~~~~ 295 (317)
+.||+|++|||+|||++ ||+++|.+ +|++|+|+ +++|||+.++ .++||.+ ||+++| |+| |++.+ ....+
T Consensus 332 ~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv~t-H~atghp~e~~~~s~ 407 (479)
T 1v8b_A 332 LKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLLNL-GCATGHPAFVMSFSF 407 (479)
T ss_dssp TTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBHHH-HSSCCSCHHHHHHHH
T ss_pred hhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEEEE-eccCCCCchhHHHHH
Confidence 99999999999999999 99999999 99999998 8999984422 3588888 999999 999 66766 67888
Q ss_pred HHHHHHHHHHHHCCC--CCCCCC
Q 042102 296 ADLVVGNLQAHFGKK--PLLTPV 316 (317)
Q Consensus 296 ~~~~~~nl~~~~~g~--~~~~~v 316 (317)
+..+++|+..|++|+ ++.|.|
T Consensus 408 a~~~~~ni~~~~~g~~~~l~n~V 430 (479)
T 1v8b_A 408 CNQTFAQLDLWQNKDTNKYENKV 430 (479)
T ss_dssp HHHHHHHHHHHHTTTSSSCCSSE
T ss_pred HHHHHHHHHHHHcCCCCcCCcce
Confidence 899999999999999 888765
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=2.6e-29 Score=232.30 Aligned_cols=205 Identities=14% Similarity=0.164 Sum_probs=162.7
Q ss_pred CCCcEEEEeCCC--ChhHHHHHHh-cCeEEEecC-CCC-------hHHHHhhccCCceEEEEe----------------C
Q 042102 5 SNNIIVLMVCPV--SNYLEQEIEK-SFKVFKLWH-FED-------KEQFINTHKDSIQAVVGS----------------A 57 (317)
Q Consensus 5 ~~~~~vl~~~~~--~~~~~~~l~~-~~~~~~~~~-~~~-------~~~~~~~~~~~~~~ii~~----------------~ 57 (317)
..+|||++.... ..+..+.|.+ .+++..... ..+ ..+.+.+.++++|+++++ .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 446788888743 3345667766 466654321 110 123345567789999875 2
Q ss_pred CCCCCHHHHhcCCCceEEEECCCCCCcCCh-hhHhhCCcEEEeCC------CCCcHHHHHHHHHHHHHHhhchhHHHHHH
Q 042102 58 AAGADAELIESLPKLEIVATCSVGLDKIDL-ARCKEKGIRVANTP------DVLTDDVADLAIGLILAVLRRICESDRYV 130 (317)
Q Consensus 58 ~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~-~~~~~~gI~v~n~~------~~~~~~vAE~al~~~L~~~r~~~~~~~~~ 130 (317)
..++++++++.+|+||+|+ +|+|++|+ ++++++||.|+|++ ++++.+|||++++++|..
T Consensus 83 ~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~----------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH----------- 148 (293)
T ss_dssp CCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred CccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh-----------
Confidence 3468999999999999998 89999998 89999999999998 889999999999998863
Q ss_pred HcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc--cCCHHHhcccCCEE
Q 042102 131 RSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY--YPNLIDLASNCQIL 203 (317)
Q Consensus 131 ~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~--~~~l~el~~~aDvV 203 (317)
.+.++.|++|||||+|.||+.+|++++++|++|++++++..+. .+... ..++++++++||+|
T Consensus 149 -----------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvV 217 (293)
T 3d4o_A 149 -----------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVC 217 (293)
T ss_dssp -----------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEE
T ss_pred -----------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEE
Confidence 1346899999999999999999999999999999999876432 12221 24688999999999
Q ss_pred EEeccCChhhhccccHHHHhccCCCcEEEEeCCCcc
Q 042102 204 VVACSLTEETQHIVNRQVINALGPKGVLINIGRGLL 239 (317)
Q Consensus 204 ~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~ 239 (317)
++|+|. ++++++.++.||+|+++||++||+.
T Consensus 218 i~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 218 INTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred EECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 999995 6889999999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.94 E-value=1.2e-26 Score=215.12 Aligned_cols=211 Identities=13% Similarity=0.185 Sum_probs=157.2
Q ss_pred CCCcEEEEeCCC--ChhHHHHHHh-cCeEEEec-CCCC-------hHHHHhhccCCceEEEEe----C----------CC
Q 042102 5 SNNIIVLMVCPV--SNYLEQEIEK-SFKVFKLW-HFED-------KEQFINTHKDSIQAVVGS----A----------AA 59 (317)
Q Consensus 5 ~~~~~vl~~~~~--~~~~~~~l~~-~~~~~~~~-~~~~-------~~~~~~~~~~~~~~ii~~----~----------~~ 59 (317)
+..|||++.... ..+..+.|.+ .+++.... ...+ ..+.+.+.++++|+++.+ . ..
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 346789999753 3345566765 46665322 1111 112234556789998872 1 34
Q ss_pred C--CCHHHHhcCCCceEEEECCCCCCcCC-hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCc
Q 042102 60 G--ADAELIESLPKLEIVATCSVGLDKID-LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWK 136 (317)
Q Consensus 60 ~--~~~~~l~~~~~Lk~i~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~ 136 (317)
+ +++++++.+|++|+|+ +|+|++| +++|+++||.|+|+|+++ ++ ++.|+++.+ +|.|.
T Consensus 85 ~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~~ 145 (300)
T 2rir_A 85 EVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTIM 145 (300)
T ss_dssp CEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHHH
T ss_pred CccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHHH
Confidence 5 7899999999999998 8999999 899999999999999964 33 335666554 34453
Q ss_pred cCcccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc--ccCCHHHhcccCCEEEEeccC
Q 042102 137 KGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK--YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 137 ~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~--~~~~l~el~~~aDvV~~~lp~ 209 (317)
......+.+++|++|||||+|.||+.+|++++++|++|.+++++..+. .+.. ...++++++++||+|++|+|.
T Consensus 146 ~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 146 LAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS 225 (300)
T ss_dssp HHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred HHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh
Confidence 211123568999999999999999999999999999999999876432 1222 135788999999999999996
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCCCcc
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGRGLL 239 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~rg~~ 239 (317)
++++++.++.||+|+++||++||+.
T Consensus 226 -----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 226 -----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp -----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred -----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 6889999999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.92 E-value=2.1e-26 Score=225.88 Aligned_cols=224 Identities=13% Similarity=0.154 Sum_probs=177.0
Q ss_pred CCce-EEEECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccC
Q 042102 70 PKLE-IVATCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTG 148 (317)
Q Consensus 70 ~~Lk-~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g 148 (317)
++++ ++-.+++|+|++ .++.++||.++|+++.+. +|+|+. +|++.........+ |.+ ..+..+.|
T Consensus 209 ~~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g-~~r---~~~~~l~G 274 (494)
T 3ce6_A 209 ESVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG-INR---GTDALIGG 274 (494)
T ss_dssp HHCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH-HHH---HHCCCCTT
T ss_pred cCeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH-HHh---ccCCCCCc
Confidence 3444 445889999998 678899999999999998 999953 45554443333333 432 11346899
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
++|+|+|+|.||+.+|++++++|++|+++++++... .++. ..+++++++++|+|+.|++ +.++++++.|+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~ 349 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATG----NKDIIMLEHIK 349 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSS----SSCSBCHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCC----CHHHHHHHHHH
Confidence 999999999999999999999999999999876432 2333 3578899999999999975 56788989999
Q ss_pred ccCCCcEEEEeCCCcc-cCHHHHHH-HHHhCCceEEEeeCCCCCCC-CCcccCCCCceE----EcccCCCccHHHHHHHH
Q 042102 224 ALGPKGVLINIGRGLL-VDEHELVS-ALLQGRLGGAGLDVFEHEPD-VPEELIGLENVV----LLPHVASATVETRKAMA 296 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~-vd~~aL~~-al~~g~i~ga~lDV~~~EP~-~~~~L~~~pnvi----~tPH~a~~t~~~~~~~~ 296 (317)
.||+|++++|+||+.. +|+++|.+ ++++++|. +.+|+++.++. .+-.++..+|++ +|||+++.+.+. +.
T Consensus 350 ~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s---~~ 425 (494)
T 3ce6_A 350 AMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNS---FA 425 (494)
T ss_dssp HSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHH---HH
T ss_pred hcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHH---HH
Confidence 9999999999999999 99999998 88888888 56898876431 122477788988 999999888765 47
Q ss_pred HHHHHHHHHHHCCCCCCCCC
Q 042102 297 DLVVGNLQAHFGKKPLLTPV 316 (317)
Q Consensus 297 ~~~~~nl~~~~~g~~~~~~v 316 (317)
+.+.++++.|.+|+++.+.|
T Consensus 426 ~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 426 NQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp HHHHHHHHHHHTGGGCCSSE
T ss_pred HHHHHHHHHHHcCCCCCCEE
Confidence 78999999999988776543
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.90 E-value=2.2e-23 Score=199.07 Aligned_cols=244 Identities=11% Similarity=0.119 Sum_probs=178.0
Q ss_pred CCChhHHHHHHh-cCeEEEecCCC-----ChHHHH----------hhccCCceEEEEeCCCCCCHHHHhcCCCceEEEEC
Q 042102 15 PVSNYLEQEIEK-SFKVFKLWHFE-----DKEQFI----------NTHKDSIQAVVGSAAAGADAELIESLPKLEIVATC 78 (317)
Q Consensus 15 ~~~~~~~~~l~~-~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~ 78 (317)
++.|+..++|.+ .+++..-.... .++++. .+.++++|+|+ ....++++++....++..++...
T Consensus 17 ~ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~-~vk~p~~~e~~~l~~~~~l~~~~ 95 (377)
T 2vhw_A 17 AITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLL-KVKEPIAAEYGRLRHGQILFTFL 95 (377)
T ss_dssp SCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEE-CSSCCCGGGGGGCCTTCEEEECC
T ss_pred CcCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEE-EeCCCChHHHhhcCCCCEEEEEe
Confidence 467888888865 57765422110 123333 12334578764 45567778888878898888888
Q ss_pred CCCCCcCChhhHhhCCcEEE----------eCCCCCcHHHHHHHHHHHHHHh-hchhHHHHHHHcCCCccCccccccccc
Q 042102 79 SVGLDKIDLARCKEKGIRVA----------NTPDVLTDDVADLAIGLILAVL-RRICESDRYVRSGEWKKGEFKMTTKFT 147 (317)
Q Consensus 79 ~~G~d~id~~~~~~~gI~v~----------n~~~~~~~~vAE~al~~~L~~~-r~~~~~~~~~~~~~w~~~~~~~~~~l~ 147 (317)
..++|...++++.++||++. |.|.+ .++||++..+++.+. |++.+ ...|+|.... . ..++.
T Consensus 96 ~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~--s~~ae~ag~~a~~~a~r~l~~----~~~g~~~~~~-~-~~~l~ 167 (377)
T 2vhw_A 96 HLAASRACTDALLDSGTTSIAYETVQTADGALPLL--APMSEVAGRLAAQVGAYHLMR----TQGGRGVLMG-G-VPGVE 167 (377)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTT--HHHHHHHHHHHHHHHHHHTSG----GGTSCCCCTT-C-BTTBC
T ss_pred cccCCHHHHHHHHHcCCeEEEeeeccccCCCcccc--CchHHHHHHHHHHHHHHHHHH----hcCCCccccc-C-CCCCC
Confidence 88999999999999999998 55554 466799985554444 77632 3344432111 1 23689
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCcc------ccCCHHHhcccCCEEEEec--cCChhh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYK------YYPNLIDLASNCQILVVAC--SLTEET 213 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~------~~~~l~el~~~aDvV~~~l--p~~~~t 213 (317)
|++|+|+|+|.||+.+++.++++|++|+++|+++... .+.. ...+++++++++|+|+.++ |.+ ++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t 246 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KA 246 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CC
Confidence 9999999999999999999999999999999876431 1111 1235778889999999976 554 68
Q ss_pred hccccHHHHhccCCCcEEEEeC--CCcccCHHHHHHHHHhCCceEEEeeCCCC-CCCC-CcccCCCCceE--EcccCCCc
Q 042102 214 QHIVNRQVINALGPKGVLINIG--RGLLVDEHELVSALLQGRLGGAGLDVFEH-EPDV-PEELIGLENVV--LLPHVASA 287 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~--rg~~vd~~aL~~al~~g~i~ga~lDV~~~-EP~~-~~~L~~~pnvi--~tPH~a~~ 287 (317)
.++++++.++.||+|+++||+| +|. ||+. ||.+ +.|+|..+|++ +|||+++.
T Consensus 247 ~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~ 304 (377)
T 2vhw_A 247 PKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVANMPAS 304 (377)
T ss_dssp CCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTTGGGG
T ss_pred cceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCCcchh
Confidence 8899999999999999999998 332 6777 8864 45899999998 99999998
Q ss_pred cHH
Q 042102 288 TVE 290 (317)
Q Consensus 288 t~~ 290 (317)
+..
T Consensus 305 ~~~ 307 (377)
T 2vhw_A 305 VPK 307 (377)
T ss_dssp SHH
T ss_pred hHH
Confidence 865
No 42
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.82 E-value=7.6e-22 Score=190.19 Aligned_cols=154 Identities=14% Similarity=0.159 Sum_probs=123.4
Q ss_pred ccc-ccCCeEEEEecChhHHHHHHHHhh-CCCEEEEeCCCCCCCCCccccCCHHHhcccCCE-EEEeccCChhhhccccH
Q 042102 143 TTK-FTGKSVGILGMGRIGTAIAKRAEA-FDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQI-LVVACSLTEETQHIVNR 219 (317)
Q Consensus 143 ~~~-l~g~~vgIiG~G~iG~~~a~~l~~-~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDv-V~~~lp~~~~t~~li~~ 219 (317)
+.+ ++|+||||+|+|+||+.+|+++++ ||++|++++++...... ....+++++++.+|. .++ +|+ ++|++ |+.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~-~~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~ 281 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYN-PDGLNADEVLKWKNEHGSV-KDF-PGATN-ITN 281 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEE-EEEECHHHHHHHHHHHSSS-TTC-TTSEE-ECH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccC-ccCCCHHHHHHHHHhcCEe-ecC-ccCee-eCH
Confidence 456 999999999999999999999999 99999988543321111 112257777665553 222 566 56788 799
Q ss_pred HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCC--cccCCCCceEEcccC----C--------
Q 042102 220 QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVP--EELIGLENVVLLPHV----A-------- 285 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~--~~L~~~pnvi~tPH~----a-------- 285 (317)
+.|..||+ .++||++||.+||+++ +++|+++.|.+++ +||..+ ++||+.+||++|||+ |
T Consensus 282 ~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E 354 (419)
T 1gtm_A 282 EELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFE 354 (419)
T ss_dssp HHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHH
T ss_pred HHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcceeeeeh
Confidence 99999998 6999999999999999 6999999999886 899765 389999999999999 6
Q ss_pred ---------CccHHHHHHHHHHHHHHHHHHH
Q 042102 286 ---------SATVETRKAMADLVVGNLQAHF 307 (317)
Q Consensus 286 ---------~~t~~~~~~~~~~~~~nl~~~~ 307 (317)
+.+.+...++.+.+.+++.+++
T Consensus 355 ~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 355 WVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888888888888876
No 43
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.81 E-value=5e-20 Score=175.36 Aligned_cols=272 Identities=16% Similarity=0.154 Sum_probs=173.6
Q ss_pred CCChhHHHHHHh-cCeEEEecCCC-----ChHHHHh---------hccCCceEEEEeCCCCCCHHHHhcC-CCceEEEEC
Q 042102 15 PVSNYLEQEIEK-SFKVFKLWHFE-----DKEQFIN---------THKDSIQAVVGSAAAGADAELIESL-PKLEIVATC 78 (317)
Q Consensus 15 ~~~~~~~~~l~~-~~~~~~~~~~~-----~~~~~~~---------~~~~~~~~ii~~~~~~~~~~~l~~~-~~Lk~i~~~ 78 (317)
++.|+..++|.+ .+++..-.... .++++.. +.+ ++|+|+. ...+++++ ++.+ |+.++|+..
T Consensus 17 ~l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~-vk~p~~~~-~~~l~~~~~~~~~~ 93 (369)
T 2eez_A 17 ALTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVK-VKEPLPEE-YGFLREGLILFTYL 93 (369)
T ss_dssp SSCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEEC-SSCCCGGG-GGGCCTTCEEEECC
T ss_pred CcCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEE-ECCCCHHH-HhhcCCCcEEEEEe
Confidence 467888888865 57665422111 1334432 244 7898764 34455444 6665 789999999
Q ss_pred CCCCCcCChhhHhhCCcEEE---eCCCC-Cc----HHHHHHHH--HHHHHHhhchhHHHHHHHcCCCccCcccccccccC
Q 042102 79 SVGLDKIDLARCKEKGIRVA---NTPDV-LT----DDVADLAI--GLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTG 148 (317)
Q Consensus 79 ~~G~d~id~~~~~~~gI~v~---n~~~~-~~----~~vAE~al--~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g 148 (317)
..+.|..+++++.++||.+. +.+.. .. .++++.+- +.++ .++.+..... ..+.|.. . ..++++
T Consensus 94 ~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~-a~~~l~~~~~--g~~~~~~---~-~~~l~~ 166 (369)
T 2eez_A 94 HLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQV-GAQFLEKPKG--GRGVLLG---G-VPGVAP 166 (369)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHH-HHHHTSGGGT--SCCCCTT---C-BTBBCC
T ss_pred cccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHH-HHHHHHHhcC--CCceecC---C-CCCCCC
Confidence 99999999999999999998 44432 11 44555443 3332 2333322210 1122321 1 136899
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCcc------ccCCHHHhcccCCEEEEeccCCh-hhhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYK------YYPNLIDLASNCQILVVACSLTE-ETQH 215 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~------~~~~l~el~~~aDvV~~~lp~~~-~t~~ 215 (317)
++|+|+|.|.||+.+++.++++|++|+++|+++... .+.. ...+++++++++|+|+.+++... .+..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~ 246 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPK 246 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------C
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccch
Confidence 999999999999999999999999999999875421 1111 12346778899999999998765 5778
Q ss_pred cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCC-CcccCCCCceE---------EcccCC
Q 042102 216 IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDV-PEELIGLENVV---------LLPHVA 285 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~-~~~L~~~pnvi---------~tPH~a 285 (317)
++.++.++.||+|+++||++-. .| |+ +|++ ||.. +.+++..+|+. +|||+|
T Consensus 247 li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~a 307 (369)
T 2eez_A 247 LVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTS 307 (369)
T ss_dssp CSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHH
T ss_pred hHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHH
Confidence 8899999999999999999821 12 44 8988 5543 45788889999 889988
Q ss_pred Cc--cHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q 042102 286 SA--TVETRKAMADLVVGNLQAHFGKKPLLTP 315 (317)
Q Consensus 286 ~~--t~~~~~~~~~~~~~nl~~~~~g~~~~~~ 315 (317)
+. +.+....+.+++.+++..++.++.+.+.
T Consensus 308 s~~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~ 339 (369)
T 2eez_A 308 TFALTNQTLPYVLKLAEKGLDALLEDAALLKG 339 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHSCHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcChhhhhcChHHhcC
Confidence 74 5667788888888888777777655443
No 44
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.77 E-value=9.2e-19 Score=168.33 Aligned_cols=219 Identities=15% Similarity=0.200 Sum_probs=147.2
Q ss_pred CCChhHHHHHHh-cCeEEEecCCCC-----hHHHHhh---------ccCCceEEEEeCCCCCCHHHHhcC-CCceEEEEC
Q 042102 15 PVSNYLEQEIEK-SFKVFKLWHFED-----KEQFINT---------HKDSIQAVVGSAAAGADAELIESL-PKLEIVATC 78 (317)
Q Consensus 15 ~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~~---------~~~~~~~ii~~~~~~~~~~~l~~~-~~Lk~i~~~ 78 (317)
++.|+..++|.+ .++|........ ++++.+. ..+ +|+|+.. .. .+++.++.+ |++++|+..
T Consensus 24 ~ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~-adiil~v-k~-p~~~~i~~l~~~~~li~~~ 100 (401)
T 1x13_A 24 AATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQ-SEIILKV-NA-PLDDEIALLNPGTTLVSFI 100 (401)
T ss_dssp SCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGS-SSEEECS-SC-CCHHHHTTCCTTCEEEECC
T ss_pred CCCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhc-CCeEEEe-CC-CCHHHHHHhcCCCcEEEEe
Confidence 357788788755 566654321111 2333311 223 7887753 33 357778886 789999999
Q ss_pred CCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHH--HHHHHcCCCccCccc-----ccccccCCeE
Q 042102 79 SVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICES--DRYVRSGEWKKGEFK-----MTTKFTGKSV 151 (317)
Q Consensus 79 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~--~~~~~~~~w~~~~~~-----~~~~l~g~~v 151 (317)
+.|+|++|++++.++||++.+ .++|+|++.++.|.+++.+... +..++.+.|....+. ...++.|++|
T Consensus 101 ~~~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g~l~g~~V 175 (401)
T 1x13_A 101 WPAQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKV 175 (401)
T ss_dssp CGGGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEE
T ss_pred cCCCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeeccCcCCCEE
Confidence 999999999999999999975 3444554444432222222221 122222222111010 0115889999
Q ss_pred EEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccC---------------------------CHHHhccc
Q 042102 152 GILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYP---------------------------NLIDLASN 199 (317)
Q Consensus 152 gIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~---------------------------~l~el~~~ 199 (317)
+|+|+|.||..+++.++++|++|+++|+++... .+..... ++.+++++
T Consensus 176 ~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~ 255 (401)
T 1x13_A 176 MVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE 255 (401)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999876531 1222111 36788889
Q ss_pred CCEEEEe--ccCChhhhccccHHHHhccCCCcEEEEeC--CCcccCH
Q 042102 200 CQILVVA--CSLTEETQHIVNRQVINALGPKGVLINIG--RGLLVDE 242 (317)
Q Consensus 200 aDvV~~~--lp~~~~t~~li~~~~l~~mk~gavlVN~~--rg~~vd~ 242 (317)
+|+|+.+ +|.. .+.++++++.++.||+|+++||+| ||+.+++
T Consensus 256 aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 256 VDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp CSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred CCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 9999999 5543 356789999999999999999999 8887765
No 45
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.72 E-value=1.4e-17 Score=160.05 Aligned_cols=153 Identities=16% Similarity=0.185 Sum_probs=115.1
Q ss_pred EECCCCCCcCC-hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEE
Q 042102 76 ATCSVGLDKID-LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGIL 154 (317)
Q Consensus 76 ~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIi 154 (317)
=-+++|+..+. ..+..+.+|+|.|++.....+..+...+..-++...+. . ..+.++.|++|||+
T Consensus 153 EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~----r-----------atg~~L~GktVgIi 217 (436)
T 3h9u_A 153 EETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK----R-----------ATDVMIAGKTACVC 217 (436)
T ss_dssp ECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH----H-----------HHCCCCTTCEEEEE
T ss_pred eccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHH----H-----------hcCCcccCCEEEEE
Confidence 34567776552 34556789999999876555544433332222222221 1 02457999999999
Q ss_pred ecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCc
Q 042102 155 GMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKG 229 (317)
Q Consensus 155 G~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 229 (317)
|+|.||+.+|++|++||++|+++++++... .++ ...++++++++||+|++ ++.|.++|+++.|+.||+|+
T Consensus 218 G~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~-~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~gA 292 (436)
T 3h9u_A 218 GYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGY-QVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRDDA 292 (436)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCTTE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCC-eecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCCCc
Confidence 999999999999999999999999876432 222 24589999999999996 34578999999999999999
Q ss_pred EEEEeCCCcc-cCHHHHHHH
Q 042102 230 VLINIGRGLL-VDEHELVSA 248 (317)
Q Consensus 230 vlVN~~rg~~-vd~~aL~~a 248 (317)
++||+|||.+ ||.++|.+.
T Consensus 293 IVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 293 IVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp EEEECSSSGGGBCHHHHHHH
T ss_pred EEEEeCCCCCccCHHHHHhh
Confidence 9999999997 899988764
No 46
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.70 E-value=1.1e-16 Score=152.99 Aligned_cols=221 Identities=10% Similarity=0.149 Sum_probs=145.5
Q ss_pred CCChhHHHHHHh-cCeEEEecCCC-----ChHHHH----------hhccCCceEEEEeCCCCC----CHHHHhcCC-Cce
Q 042102 15 PVSNYLEQEIEK-SFKVFKLWHFE-----DKEQFI----------NTHKDSIQAVVGSAAAGA----DAELIESLP-KLE 73 (317)
Q Consensus 15 ~~~~~~~~~l~~-~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~ii~~~~~~~----~~~~l~~~~-~Lk 73 (317)
++.|+..++|.+ .+++..-.... .++++. .+.+.++|+|+.. ..++ +++.++.++ .++
T Consensus 17 ~l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v-~~p~~~~~~~~~i~~l~~~~~ 95 (384)
T 1l7d_A 17 AISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKV-QRPMTAEEGTDEVALIKEGAV 95 (384)
T ss_dssp SCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEE-ECCCCGGGSCCGGGGSCTTCE
T ss_pred CCCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEe-cCcccccCCHHHHHhhccCCE
Confidence 467888888866 46665422111 123333 2445778988764 3455 788889886 699
Q ss_pred EEEECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCc---ccc-c-ccccC
Q 042102 74 IVATCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGE---FKM-T-TKFTG 148 (317)
Q Consensus 74 ~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~---~~~-~-~~l~g 148 (317)
+|+....+.|+.+++++.++||.+++.. ...+.+++..+. +|+..+.+. .+..+..+.|.... ..+ + .++.|
T Consensus 96 ~i~~~~~~~~~~~~~~~~~~gi~~~~~e-~~~~~~~~~~l~-~l~~~a~~a-g~~av~~~~~~~~~~~~~~~~~~~~l~g 172 (384)
T 1l7d_A 96 LMCHLGALTNRPVVEALTKRKITAYAME-LMPRISRAQSMD-ILSSQSNLA-GYRAVIDGAYEFARAFPMMMTAAGTVPP 172 (384)
T ss_dssp EEEECCGGGCHHHHHHHHHTTCEEEEGG-GCCCSGGGGGGC-HHHHHHHHH-HHHHHHHHHHHCSSCSSCEEETTEEECC
T ss_pred EEEEecccCCHHHHHHHHHCCCEEEEec-cccccccccccc-hhhHHHHHH-HHHHHHHHHHHhhhcccchhccCCCCCC
Confidence 9999999999999999999999999842 122211222222 222222221 11222222221000 001 1 36899
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcccc---C----------------C----------HH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYY---P----------------N----------LI 194 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~---~----------------~----------l~ 194 (317)
++|+|+|+|.||+.+++.++++|++|.++|+++... .+.... . + +.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~ 252 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVL 252 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHH
Confidence 999999999999999999999999999999876531 122111 0 1 67
Q ss_pred HhcccCCEEEEec--cCChhhhccccHHHHhccCCCcEEEEeC--CCccc
Q 042102 195 DLASNCQILVVAC--SLTEETQHIVNRQVINALGPKGVLINIG--RGLLV 240 (317)
Q Consensus 195 el~~~aDvV~~~l--p~~~~t~~li~~~~l~~mk~gavlVN~~--rg~~v 240 (317)
++++++|+|+.+. |..+ +.++++++.++.||+|+++||++ ||..+
T Consensus 253 ~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 253 KELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp HHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 8889999999877 4433 45688999999999999999999 76644
No 47
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.67 E-value=9.4e-17 Score=154.15 Aligned_cols=152 Identities=14% Similarity=0.147 Sum_probs=110.9
Q ss_pred EECCCCCCcCC-hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEE
Q 042102 76 ATCSVGLDKID-LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGIL 154 (317)
Q Consensus 76 ~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIi 154 (317)
=-+++|+-.+- ....-...+++.|+... +..+-+-....+.+.+.....+ ..+.++.|+||||+
T Consensus 189 EeTtTGv~rL~~m~~~g~L~~PvinVnds----~tK~~fDn~yG~~eslvdgI~R-----------atg~~L~GKTVgVI 253 (464)
T 3n58_A 189 EETTTGVNRLYQLQKKGLLPFPAINVNDS----VTKSKFDNKYGCKESLVDGIRR-----------GTDVMMAGKVAVVC 253 (464)
T ss_dssp ECSHHHHHHHHHHHHHTCCCSCEEECTTS----HHHHTTHHHHHHHHHHHHHHHH-----------HHCCCCTTCEEEEE
T ss_pred eccccchHHHHHHHHcCCCCCCEEeeccH----hhhhhhhhhhcchHHHHHHHHH-----------hcCCcccCCEEEEE
Confidence 34566766542 22334567899998654 4444333333333333222211 12457999999999
Q ss_pred ecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCc
Q 042102 155 GMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKG 229 (317)
Q Consensus 155 G~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 229 (317)
|+|.||+.+|+++++||++|+++++++... .++ ...++++++++||+|+++. .|+++|+++.|+.||+|+
T Consensus 254 G~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~-~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GA 328 (464)
T 3n58_A 254 GYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGF-EVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMC 328 (464)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC-EECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTE
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCc-eeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCe
Confidence 999999999999999999999998765321 222 2458999999999999864 378999999999999999
Q ss_pred EEEEeCCCcc-cCHHHHHH
Q 042102 230 VLINIGRGLL-VDEHELVS 247 (317)
Q Consensus 230 vlVN~~rg~~-vd~~aL~~ 247 (317)
++||+|||.+ +|.++|.+
T Consensus 329 ILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 329 IVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp EEEECSSSTTTBTCGGGTT
T ss_pred EEEEcCCCCcccCHHHHHh
Confidence 9999999998 99988874
No 48
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.65 E-value=8.1e-18 Score=161.92 Aligned_cols=207 Identities=16% Similarity=0.263 Sum_probs=156.1
Q ss_pred CCceEEEECCCCCCcCChhhHh-----hCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCc--ccc
Q 042102 70 PKLEIVATCSVGLDKIDLARCK-----EKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGE--FKM 142 (317)
Q Consensus 70 ~~Lk~i~~~~~G~d~id~~~~~-----~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~--~~~ 142 (317)
+.+++|...++|+|++++.++. ++++.+++.+|. ..+++++.+..++.+.|++..... ...+.|.... ...
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~-~~~~~~s~a~~av~~ 157 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETR-ISEGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSS-TTCSCCSHHHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhh-hcCCCccHHHHHHHH
Confidence 4678899999999999998887 889999998887 568999999999999999866532 2234453110 011
Q ss_pred c----ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC------CCcc--ccCCHHHhcccCCEEEEeccC
Q 042102 143 T----TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN------LNYK--YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 143 ~----~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~------~~~~--~~~~l~el~~~aDvV~~~lp~ 209 (317)
. .++.|++|+|+|+|.||+.+++.++.+|+ +|++++|+..+. .+.. ...++.+++.++|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 1 14789999999999999999999999999 999999976432 1221 124677888999999999874
Q ss_pred ChhhhccccHHHHhc--cC----CCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC-CCcccCCCCceEE--
Q 042102 210 TEETQHIVNRQVINA--LG----PKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPD-VPEELIGLENVVL-- 280 (317)
Q Consensus 210 ~~~t~~li~~~~l~~--mk----~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~-~~~~L~~~pnvi~-- 280 (317)
+ ..+++++.++. || ++.++||++ +|. ..++++++|||++
T Consensus 238 ~---~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d 285 (404)
T 1gpj_A 238 P---HPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRT 285 (404)
T ss_dssp S---SCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEE
T ss_pred C---CceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEe
Confidence 4 45677777876 42 456667765 354 3458999999999
Q ss_pred cccCCCccHHHHH----------HHHHHHHHHHHHHHCCC
Q 042102 281 LPHVASATVETRK----------AMADLVVGNLQAHFGKK 310 (317)
Q Consensus 281 tPH~a~~t~~~~~----------~~~~~~~~nl~~~~~g~ 310 (317)
+||+++.+.++.+ .+.+..++++..|+++.
T Consensus 286 ~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~ 325 (404)
T 1gpj_A 286 IDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKL 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998887654 56667777888887654
No 49
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.61 E-value=1.3e-15 Score=146.07 Aligned_cols=151 Identities=16% Similarity=0.250 Sum_probs=108.5
Q ss_pred EECCCCCCcC-ChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEE
Q 042102 76 ATCSVGLDKI-DLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGIL 154 (317)
Q Consensus 76 ~~~~~G~d~i-d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIi 154 (317)
=-+++|+-.+ .....-+..++|.|+.+....+--+-.-+.--++...+. + ..+..+.|++|+|+
T Consensus 162 EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~----r-----------at~~~L~GktV~Vi 226 (435)
T 3gvp_A 162 EESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLK----R-----------TTDMMFGGKQVVVC 226 (435)
T ss_dssp ECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHH----H-----------HHCCCCTTCEEEEE
T ss_pred eccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHHHH----H-----------hhCceecCCEEEEE
Confidence 3456676554 223334568999999876555544422221111111111 0 02456999999999
Q ss_pred ecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCc
Q 042102 155 GMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKG 229 (317)
Q Consensus 155 G~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 229 (317)
|+|.||+.+|++|++||++|+++++++... .++ ...++++++++||+|+++ +.|.++|+++.|+.||+|+
T Consensus 227 G~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~-~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~ga 301 (435)
T 3gvp_A 227 GYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGF-RLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSC 301 (435)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCC-EeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCc
Confidence 999999999999999999999999875321 222 246899999999999995 4578899999999999999
Q ss_pred EEEEeCCCcc-cCHHHHH
Q 042102 230 VLINIGRGLL-VDEHELV 246 (317)
Q Consensus 230 vlVN~~rg~~-vd~~aL~ 246 (317)
++||+|||.. +|.++|.
T Consensus 302 ilINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 302 IVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp EEEECSSTTTTBTGGGGC
T ss_pred EEEEecCCCccCCHHHHH
Confidence 9999999998 7877664
No 50
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.42 E-value=4.7e-13 Score=123.56 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=94.3
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
++|||||+|.||..||++|...|++|.+|||++.+.. +.....++.|+++.||+|++++|..+.++.++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 4799999999999999999999999999999876532 34456789999999999999999988888888888999
Q ss_pred ccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeC
Q 042102 224 ALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDV 261 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV 261 (317)
.+++|.++||++...+-..+.+.+.+.+..+. .+|.
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 99999999999999999999999999999887 6674
No 51
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.42 E-value=1.8e-13 Score=126.52 Aligned_cols=111 Identities=10% Similarity=0.179 Sum_probs=97.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc--HHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN--RQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~--~~~ 221 (317)
++|||||+|.||..||++|...|++|.+|||++.+. .+.....++.|+++.||+|++|+|..++++.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 589999999999999999999999999999987543 3456678999999999999999999999888763 346
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeC
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDV 261 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV 261 (317)
++.+++|.++||++...+-+...+.+.+++..+. .+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 7889999999999999999999999999999887 6774
No 52
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.34 E-value=1e-12 Score=121.56 Aligned_cols=116 Identities=9% Similarity=0.028 Sum_probs=97.1
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~ 218 (317)
.+...++|||||+|.||+.+|+.|...|++|.+||+++... .+.....++.+++++||+|++++|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 34567899999999999999999999999999999986532 2344567899999999999999998877888775
Q ss_pred HHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeC
Q 042102 219 RQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDV 261 (317)
Q Consensus 219 ~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV 261 (317)
++.+..+++|.++||+++....+.+.+.+.+.+..+. .+|.
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vda 125 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVKG 125 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEEE
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEec
Confidence 4346678899999999999999999999999887765 4563
No 53
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.33 E-value=8.7e-11 Score=111.40 Aligned_cols=227 Identities=10% Similarity=0.086 Sum_probs=136.3
Q ss_pred CCCCCCcEEEEeC---------CCChhHHHHHHh-cCeEEEecCCCC-----hHHHHh------hccCCceEEEEeCCCC
Q 042102 2 DNNSNNIIVLMVC---------PVSNYLEQEIEK-SFKVFKLWHFED-----KEQFIN------THKDSIQAVVGSAAAG 60 (317)
Q Consensus 2 ~~~~~~~~vl~~~---------~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~------~~~~~~~~ii~~~~~~ 60 (317)
|.+..+|+|-|.. ++.|+..++|.+ .+++..-..... ++++.+ +.+. +|+|+.- ..
T Consensus 17 ~~~~~~m~IgvpkE~~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~-adiIlkV--k~ 93 (381)
T 3p2y_A 17 QGPGSMTLIGVPRESAEGERRVALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWP-ADVVVKV--NP 93 (381)
T ss_dssp ---CTTCEEEECCCCSTTCCCCSSCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTT-SSEEECS--SC
T ss_pred cCCCcceEEEEEecCCCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeec-CCEEEEe--CC
Confidence 3456678888875 356888888755 566654322211 344432 1123 6766532 23
Q ss_pred CCHHHHhcCC-CceEEEECCCCCCcCChhhHhhCCcEEEe---CCCCC-c------HHHHHHHHHHHHHHhhchhHHHHH
Q 042102 61 ADAELIESLP-KLEIVATCSVGLDKIDLARCKEKGIRVAN---TPDVL-T------DDVADLAIGLILAVLRRICESDRY 129 (317)
Q Consensus 61 ~~~~~l~~~~-~Lk~i~~~~~G~d~id~~~~~~~gI~v~n---~~~~~-~------~~vAE~al~~~L~~~r~~~~~~~~ 129 (317)
.+++.++.++ +-.+|+....-.|.=-++++.++||+..- .+... + .+++|.+= .+-+......
T Consensus 94 p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAG------y~Av~~aa~~ 167 (381)
T 3p2y_A 94 PTSDEISQLKPGSVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAG------YKAVLLGASL 167 (381)
T ss_dssp CCHHHHTTSCTTCEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHH------HHHHHHHHHH
T ss_pred CChhHHhhccCCCEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHH------HHHHHHHHHH
Confidence 4556666664 55566655555554445788899999865 22211 1 22333221 1111111111
Q ss_pred HHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc---------------
Q 042102 130 VRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY--------------- 189 (317)
Q Consensus 130 ~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~--------------- 189 (317)
. +.....-..-...+.+++|+|+|+|.||..+++.++++|++|.++|+++... .+..+
T Consensus 168 l--~~~~~~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 168 S--TRFVPMLTTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp C--SSCSSCEECSSCEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-----------
T ss_pred h--hhhhhhhhcccCCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchh
Confidence 1 1110000001235789999999999999999999999999999999986531 11111
Q ss_pred ----------cCCHHHhcccCCEEEEec--cCChhhhccccHHHHhccCCCcEEEEeC--CCccc
Q 042102 190 ----------YPNLIDLASNCQILVVAC--SLTEETQHIVNRQVINALGPKGVLINIG--RGLLV 240 (317)
Q Consensus 190 ----------~~~l~el~~~aDvV~~~l--p~~~~t~~li~~~~l~~mk~gavlVN~~--rg~~v 240 (317)
..++.++++++|+|+.++ |..+ +..+++++.++.||||+++||++ +|..+
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~-ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITKFDIVITTALVPGRP-APRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSC-CCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred hhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcc-cceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 124678999999999875 5433 56789999999999999999997 45443
No 54
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.33 E-value=1.1e-11 Score=115.10 Aligned_cols=162 Identities=16% Similarity=0.151 Sum_probs=102.4
Q ss_pred HHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCC-----CCc--cccCCHHH-hccc
Q 042102 130 VRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPN-----LNY--KYYPNLID-LASN 199 (317)
Q Consensus 130 ~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~-----~~~--~~~~~l~e-l~~~ 199 (317)
+..+.|.....+...++..++|||||+|.||+.+|+.|+..|+ +|.+||+++... .+. ....++++ ++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 15 VPRGSHMKNIIKILKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFS 94 (314)
T ss_dssp --------------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGC
T ss_pred cccccCcCcCCchhhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhcc
Confidence 3445564333333334556899999999999999999999999 999999976432 122 23457788 8999
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCC---CCCC-cccCCC
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHE---PDVP-EELIGL 275 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~E---P~~~-~~L~~~ 275 (317)
||+|++++|... +..++ ++....+++++++++++.......+++.+.+.. ++.+. -=++..| |... ..|+.-
T Consensus 95 aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g 170 (314)
T 3ggo_A 95 PDFVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEG 170 (314)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTT
T ss_pred CCEEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcC
Confidence 999999999764 34444 566777999999999987765445566666644 22211 1233333 1111 258888
Q ss_pred CceEEcccCCCccHHHHHHHH
Q 042102 276 ENVVLLPHVASATVETRKAMA 296 (317)
Q Consensus 276 pnvi~tPH~a~~t~~~~~~~~ 296 (317)
..+++||+-+ .+.+..+++.
T Consensus 171 ~~~il~~~~~-~~~~~~~~v~ 190 (314)
T 3ggo_A 171 KKVILTPTKK-TDKKRLKLVK 190 (314)
T ss_dssp CEEEECCCTT-SCHHHHHHHH
T ss_pred CEEEEEeCCC-CCHHHHHHHH
Confidence 8999999843 4555444443
No 55
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.32 E-value=4e-12 Score=117.76 Aligned_cols=116 Identities=13% Similarity=0.080 Sum_probs=95.3
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccc
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIV 217 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li 217 (317)
.+....++|||||+|.||+.+|+.|...|++|.+||+++... .+.....++.+++++||+|++++|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 344566899999999999999999999999999999987543 234456789999999999999999877777665
Q ss_pred --cHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 218 --NRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 218 --~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
.++.++.+++|.++||+++..+...+.+.+.+.+..+. .+|
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~v~ 138 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR--FVE 138 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 24566789999999999999988888999988887665 455
No 56
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.31 E-value=2.9e-12 Score=119.24 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=95.8
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
....++|||||+|.||+.+|+.|...|++|.+||+++... .+.....++++++++||+|++++|....++.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 3456799999999999999999999999999999986532 23445678999999999999999987777776643
Q ss_pred -HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeC
Q 042102 220 -QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDV 261 (317)
Q Consensus 220 -~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV 261 (317)
..++.+++|.++||++++.+...+.+.+.+.+..+. .+|.
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~~ 148 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA--HLDT 148 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE--EEeC
Confidence 567789999999999999999999999999887765 4553
No 57
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.30 E-value=6.4e-12 Score=116.55 Aligned_cols=135 Identities=10% Similarity=0.093 Sum_probs=91.7
Q ss_pred HHHHcCCCc-cCcccccccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCC--CC-----CCCccccCCHHHhcc
Q 042102 128 RYVRSGEWK-KGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTE--KP-----NLNYKYYPNLIDLAS 198 (317)
Q Consensus 128 ~~~~~~~w~-~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~--~~-----~~~~~~~~~l~el~~ 198 (317)
++.+.+.|. +.+++.......++|||||+|.||+.+|+.|...|+ +|.+||+++ .. ..+.....++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 3 HHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAG 82 (312)
T ss_dssp ----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHH
T ss_pred cccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHh
Confidence 456677776 233333334456799999999999999999999999 999999963 21 124445678999999
Q ss_pred cCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC--CceEEEee--CCCCCC
Q 042102 199 NCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG--RLGGAGLD--VFEHEP 266 (317)
Q Consensus 199 ~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g--~i~ga~lD--V~~~EP 266 (317)
+||+|++++|...... .+ ++..+.+++|.++||+++........+.+.+.+. .+. .+| |+.++|
T Consensus 83 ~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~--~vd~pv~g~~~ 150 (312)
T 3qsg_A 83 ECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ--YAAVAVMSAVK 150 (312)
T ss_dssp HCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE--EEEEEECSCST
T ss_pred cCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe--EEeccccCCch
Confidence 9999999999877655 23 5677889999999999999988888999888876 443 455 444333
No 58
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.28 E-value=6.8e-12 Score=115.44 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=93.3
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
.++|||||+|.||+.+|+.|...|++|.+||+++... .+.....+++++++ ||+|++++|....++.++ ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 3689999999999999999999999999999987653 23445678999999 999999999887777777 6778
Q ss_pred hccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 223 NALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 223 ~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
+.+++|.++||+++......+.+.+.+.+..+. .+|
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 128 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH--IVD 128 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE--EEE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 889999999999999998888999999877665 445
No 59
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.25 E-value=1.3e-11 Score=112.78 Aligned_cols=110 Identities=14% Similarity=0.240 Sum_probs=93.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc--HHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN--RQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~--~~~ 221 (317)
++|||||+|.||+.+|+.|...|++|.+||+++... .+.....++++++++||+|++++|....++.++. ++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999987543 2344567899999999999999998777777662 456
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
++.+++|.++||+++....+.+.+.+.+.+..+. .+|
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR--FLE 118 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE--EEE
Confidence 7789999999999999988889999999887665 445
No 60
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.25 E-value=1.1e-11 Score=117.20 Aligned_cols=116 Identities=9% Similarity=0.175 Sum_probs=96.0
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccC---CEEEEeccCChhhhccc
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNC---QILVVACSLTEETQHIV 217 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~a---DvV~~~lp~~~~t~~li 217 (317)
+.+++|||||+|.||+.+|+.|...|++|.+||+++... .+.....+++++++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 567899999999999999999999999999999986432 2344567899999999 9999999987 777776
Q ss_pred cHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCC
Q 042102 218 NRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFE 263 (317)
Q Consensus 218 ~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~ 263 (317)
...+..+++|.++||++++...+...+.+.+.+..+......|+.
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 567788999999999999999999999999998888744333443
No 61
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.22 E-value=1.3e-11 Score=112.91 Aligned_cols=110 Identities=14% Similarity=0.158 Sum_probs=92.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc--HHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN--RQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~--~~~ 221 (317)
++|||||+|.||+.+|+.|...|++|.+||+++... .+.....++++++++||+|++++|....++.++. +..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 479999999999999999999999999999987643 1334567899999999999999998777776652 456
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
++.+++|.++||++++.....+.+.+.+.+..+. .+|
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR--FLE 118 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 6789999999999999998888999988887665 445
No 62
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.22 E-value=6e-11 Score=107.84 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=99.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCC-----CCcc--ccCCHHHhcc-cCCEEEEeccCChhhhcccc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPN-----LNYK--YYPNLIDLAS-NCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~-----~~~~--~~~~l~el~~-~aDvV~~~lp~~~~t~~li~ 218 (317)
++|||||+|.||+.+++.|+..|+ +|.++++++... .+.. ...+++++++ +||+|++++|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 489999999999999999999998 999999875421 1221 2356888899 999999999965 3445553
Q ss_pred HHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCC---CCC-cccCCCCceEEcccCCCccHHHHHH
Q 042102 219 RQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEP---DVP-EELIGLENVVLLPHVASATVETRKA 294 (317)
Q Consensus 219 ~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP---~~~-~~L~~~pnvi~tPH~a~~t~~~~~~ 294 (317)
+..+.+++++++++++++.....+.+.+.+.++-+. ..-++..|. ... .+++..++++++||.++. .+..+.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~--~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~~~ 156 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVG--GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRLKL 156 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEEC--EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHHHH
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhcccccee--eccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHHHH
Confidence 456678999999999988866667788877664221 112333332 212 257788889999997654 343333
No 63
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.22 E-value=1.4e-10 Score=110.77 Aligned_cols=223 Identities=13% Similarity=0.194 Sum_probs=134.2
Q ss_pred CCcEEEEeC---------CCChhHHHHHHh-cCeEEEecCCCC-----hHHHHh--------hccCCceEEEEeCCCCCC
Q 042102 6 NNIIVLMVC---------PVSNYLEQEIEK-SFKVFKLWHFED-----KEQFIN--------THKDSIQAVVGSAAAGAD 62 (317)
Q Consensus 6 ~~~~vl~~~---------~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~--------~~~~~~~~ii~~~~~~~~ 62 (317)
+.|+|=|.. ++.|+..++|.+ .++|..-..... ++++.+ +.+.++|+|+.-. . .+
T Consensus 24 ~~m~IGvpkE~~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkVk-~-p~ 101 (405)
T 4dio_A 24 VSEIVFIAKESDPNEGRVAGSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVR-R-PS 101 (405)
T ss_dssp --CEEEECCCCCTTCCCCSCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEEE-C-CC
T ss_pred cceEEEEecCCCCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEeC-C-CC
Confidence 457777765 367888787754 577654332211 333322 1133567766422 2 23
Q ss_pred HHHHhcC-CCceEEEECCCCCCcCChhhHhhCCcEEEe---CCCCC-c------HHHHHHHHHHHHHHhhchhHHHHHHH
Q 042102 63 AELIESL-PKLEIVATCSVGLDKIDLARCKEKGIRVAN---TPDVL-T------DDVADLAIGLILAVLRRICESDRYVR 131 (317)
Q Consensus 63 ~~~l~~~-~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n---~~~~~-~------~~vAE~al~~~L~~~r~~~~~~~~~~ 131 (317)
++.++.+ ++-.+|+..-..-|.=-++++.++||+..- .+... + .+++|.+= .+-+.......
T Consensus 102 ~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAG------y~Av~~aa~~l- 174 (405)
T 4dio_A 102 AQEISGYRSGAVVIAIMDPYGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAG------YQAVIDAAYEY- 174 (405)
T ss_dssp TTTGGGSCTTCEEEEECCCTTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHH------HHHHHHHHHHC-
T ss_pred hhHHhhcCCCcEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHH------HHHHHHHHHHh-
Confidence 3444555 456666666555554445788899999865 33211 1 12333221 11111111111
Q ss_pred cCCCccCcccc--cccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc----------------
Q 042102 132 SGEWKKGEFKM--TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK---------------- 188 (317)
Q Consensus 132 ~~~w~~~~~~~--~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~---------------- 188 (317)
...+. ..+ ...+.+.+|+|+|+|.||..+++.++++|++|.++|+++... .+..
T Consensus 175 ~~~~~---~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~ 251 (405)
T 4dio_A 175 DRALP---MMMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAG 251 (405)
T ss_dssp SSCSS---CEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC----------
T ss_pred Hhhhc---hhhccCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeeccccccccccccc
Confidence 00111 011 135789999999999999999999999999999999886531 1111
Q ss_pred -c------------cCCHHHhcccCCEEEEec--cCChhhhccccHHHHhccCCCcEEEEeC--CCcccC
Q 042102 189 -Y------------YPNLIDLASNCQILVVAC--SLTEETQHIVNRQVINALGPKGVLINIG--RGLLVD 241 (317)
Q Consensus 189 -~------------~~~l~el~~~aDvV~~~l--p~~~~t~~li~~~~l~~mk~gavlVN~~--rg~~vd 241 (317)
+ ..++.+++++||+|+.++ |..+ ...+++++.++.||||+++||++ +|..++
T Consensus 252 ~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~-ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e 320 (405)
T 4dio_A 252 GYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRP-APRLVTREMLDSMKPGSVVVDLAVERGGNIE 320 (405)
T ss_dssp -------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSC-CCCCBCHHHHTTSCTTCEEEETTGGGTCSBT
T ss_pred chhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCC-CCEEecHHHHhcCCCCCEEEEEeCCCCCCcc
Confidence 0 125778899999999874 5433 56789999999999999999998 666554
No 64
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.20 E-value=1.5e-11 Score=113.39 Aligned_cols=111 Identities=17% Similarity=0.151 Sum_probs=91.7
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc-cCCHHHhcccCCEEEEeccCChhhhcccc--H
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY-YPNLIDLASNCQILVVACSLTEETQHIVN--R 219 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~-~~~l~el~~~aDvV~~~lp~~~~t~~li~--~ 219 (317)
.++|||||+|.||+.+|+.|...|++|.+||+++... .+... ..+++++++.||+|++++|....++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 4689999999999999999999999999999986432 23333 56889999999999999998777776652 4
Q ss_pred HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 220 QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
+.++.+++|.++||+++......+.+.+.+.+..+. .+|
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 125 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN--MLD 125 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 566789999999999999988888999988886665 455
No 65
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.20 E-value=1e-10 Score=106.93 Aligned_cols=136 Identities=12% Similarity=0.112 Sum_probs=99.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------------------C------------ccccCCHHHhcc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------------------N------------YKYYPNLIDLAS 198 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------------~------------~~~~~~l~el~~ 198 (317)
++|+|||+|.||+.+|+.+...|++|.++|++++... . .....+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 6899999999999999999999999999998764310 0 123467888999
Q ss_pred cCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCce
Q 042102 199 NCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENV 278 (317)
Q Consensus 199 ~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnv 278 (317)
+||+|+.++|.+.+....+-++..+.+++++++++.+.+ +..+.+.+.+... -...++..+ .|.+..+.+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~-------~p~~~~~lv 154 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFA-------NHVWVNNTA 154 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEEC-------SSTTTSCEE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccC-------CCcccCceE
Confidence 999999999998776666666777889999999965544 3566777777432 233455544 245677888
Q ss_pred EEcccCCCccHHHHHHH
Q 042102 279 VLLPHVASATVETRKAM 295 (317)
Q Consensus 279 i~tPH~a~~t~~~~~~~ 295 (317)
.++||- ..+.+..++.
T Consensus 155 evv~~~-~t~~~~~~~~ 170 (283)
T 4e12_A 155 EVMGTT-KTDPEVYQQV 170 (283)
T ss_dssp EEEECT-TSCHHHHHHH
T ss_pred EEEeCC-CCCHHHHHHH
Confidence 999983 3344444443
No 66
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.19 E-value=3.7e-11 Score=113.13 Aligned_cols=103 Identities=17% Similarity=0.254 Sum_probs=86.6
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcc-cCCEEEEeccCChhhhcccc
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLAS-NCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~-~aDvV~~~lp~~~~t~~li~ 218 (317)
++.|+||+|+|+|+||+.+|++++.+|++|+++|++.... .+.. ..+.++++. +||+++.| ++.++|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~-~v~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT-AVALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE-EeChHHhhcCccceecHh-----HHHhhcC
Confidence 6899999999999999999999999999999998764321 1222 336778887 89998753 5788999
Q ss_pred HHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 219 RQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 219 ~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++.++.|| ..+++|.+++.++++++ .++|+++.+.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 78999999999999888 5899999886
No 67
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.18 E-value=2.8e-11 Score=111.22 Aligned_cols=110 Identities=10% Similarity=0.180 Sum_probs=91.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc--HHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN--RQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~--~~~ 221 (317)
++|||||+|.||+.+|+.|...|++|.+|++++... .+.....++++++++||+|++++|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999876432 2444567899999999999999998777776664 256
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
++.++++.++||++++.....+.+.+.+.+..+. .+|
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~--~~~ 120 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLD 120 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC--EEE
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 6789999999999999988888999999876554 455
No 68
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.17 E-value=5.4e-11 Score=110.62 Aligned_cols=104 Identities=11% Similarity=0.091 Sum_probs=87.3
Q ss_pred CCeEEEEecChhHHHHHHHHhhCC-CEEEEeCCCCCC-------C-----CCccccC-CHHHhcccCCEEEEeccCChhh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFD-CIIGYNSRTEKP-------N-----LNYKYYP-NLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~~-------~-----~~~~~~~-~l~el~~~aDvV~~~lp~~~~t 213 (317)
.++|||||+|.||..+|+.|...| ++|.+||+++.. . .+. .. ++.+++++||+|++++|.....
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~ 101 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATK 101 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHH
Confidence 368999999999999999999999 999999987621 0 122 45 7889999999999999987766
Q ss_pred hccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 214 QHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
..+ ++..+.+++|.++||+++......+.+.+.+++..+.
T Consensus 102 ~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~ 141 (317)
T 4ezb_A 102 AVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGS 141 (317)
T ss_dssp HHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCE
T ss_pred HHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 543 6677889999999999999988899999999887665
No 69
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.15 E-value=1e-10 Score=107.70 Aligned_cols=136 Identities=15% Similarity=0.104 Sum_probs=89.5
Q ss_pred HHHHHHHcCCCccCcccccccccCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEE
Q 042102 125 ESDRYVRSGEWKKGEFKMTTKFTGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQIL 203 (317)
Q Consensus 125 ~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV 203 (317)
+++..+++..|.... + ..++||||| +|.||+.+|+.|+..|++|.++++++. .+..+++++||+|
T Consensus 4 ~~~~~~~~~~~~~~~-~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~--------~~~~~~~~~aDvV 69 (298)
T 2pv7_A 4 ESYANENQFGFKTIN-S-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW--------AVAESILANADVV 69 (298)
T ss_dssp ---------CCCCSC-T-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG--------GGHHHHHTTCSEE
T ss_pred hHHhhhhccCccccC-C-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc--------cCHHHHhcCCCEE
Confidence 444555667785311 1 246899999 999999999999999999999998653 2577889999999
Q ss_pred EEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCC--CCcccCCCCceEEc
Q 042102 204 VVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPD--VPEELIGLENVVLL 281 (317)
Q Consensus 204 ~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~--~~~~L~~~pnvi~t 281 (317)
++++|... +..++ ++....++++++++++++......+.+.+.+ ... +....|. +..+++...+++++
T Consensus 70 ilavp~~~-~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~~~-----~v~~hP~~g~~~~~~~g~~~~l~ 139 (298)
T 2pv7_A 70 IVSVPINL-TLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH---TGA-----VLGLHPMFGADIASMAKQVVVRC 139 (298)
T ss_dssp EECSCGGG-HHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSE-----EEEEEECSCTTCSCCTTCEEEEE
T ss_pred EEeCCHHH-HHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---CCC-----EEeeCCCCCCCchhhcCCeEEEe
Confidence 99999665 56665 3455678999999999876543344444432 122 2222332 12246666689999
Q ss_pred ccC
Q 042102 282 PHV 284 (317)
Q Consensus 282 PH~ 284 (317)
||-
T Consensus 140 ~~~ 142 (298)
T 2pv7_A 140 DGR 142 (298)
T ss_dssp EEE
T ss_pred cCC
Confidence 974
No 70
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.10 E-value=1.1e-10 Score=114.48 Aligned_cols=109 Identities=10% Similarity=0.142 Sum_probs=91.7
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------C--ccccCCHHHhcc---cCCEEEEeccCChhhh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------N--YKYYPNLIDLAS---NCQILVVACSLTEETQ 214 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------~--~~~~~~l~el~~---~aDvV~~~lp~~~~t~ 214 (317)
.++|||||+|.||+.+|+.|...|++|.+||+++.... + .....+++++++ .+|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 36899999999999999999999999999999875321 1 112467888876 5999999999988888
Q ss_pred ccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEE
Q 042102 215 HIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGA 257 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga 257 (317)
.++ ++..+.|++|.++||++++...+...+.+.+.+..+...
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fv 125 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFV 125 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccc
Confidence 877 577788999999999999999999999999988877633
No 71
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.08 E-value=7e-11 Score=107.87 Aligned_cols=135 Identities=12% Similarity=0.136 Sum_probs=95.0
Q ss_pred CeEEEEecChhHHHHHHHHhhC--CCEEEEeCCCCCCC-----CCc--cccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF--DCIIGYNSRTEKPN-----LNY--KYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~-----~~~--~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
++|||||+|.||+.+++.|... |.+|.++|+++... .+. ....++++++++||+|++++|.... ..++ +
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~-~~v~-~ 84 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKT-IDFI-K 84 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHH-HHHH-H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHH-HHHH-H
Confidence 6899999999999999999865 68999999875422 122 1245677888999999999996543 4454 3
Q ss_pred HHHhc-cCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee---CCCC---CCCCC-cccCCCCceEEcccCCCc
Q 042102 220 QVINA-LGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD---VFEH---EPDVP-EELIGLENVVLLPHVASA 287 (317)
Q Consensus 220 ~~l~~-mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD---V~~~---EP~~~-~~L~~~pnvi~tPH~a~~ 287 (317)
+..+. ++++.+++++++......+.+.+.+.+..+. .++ ++.. .|... .+++.-++++++||.++.
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 45566 8999999999887766667777777652333 233 2222 23222 267788889999987653
No 72
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.08 E-value=2.6e-10 Score=111.07 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=98.8
Q ss_pred ECCCCCCcCC-hhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEe
Q 042102 77 TCSVGLDKID-LARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILG 155 (317)
Q Consensus 77 ~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG 155 (317)
-+++|+..+- +.+.....|+|.|+.+....+.-+-..+.--++.. +.|. ..+.++.|++++|+|
T Consensus 208 eTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~d-----------gi~r----~tg~~L~GKtVvVtG 272 (488)
T 3ond_A 208 ETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPD-----------GLMR----ATDVMIAGKVAVVAG 272 (488)
T ss_dssp CSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHH-----------HHHH----HHCCCCTTCEEEEEC
T ss_pred cccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHH-----------HHHH----HcCCcccCCEEEEEC
Confidence 4567777652 22334567999999775444322221111111111 1111 123468999999999
Q ss_pred cChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcE
Q 042102 156 MGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGV 230 (317)
Q Consensus 156 ~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gav 230 (317)
+|.||+.+|++|+++|++|+++++++... .++ ...+++++++.+|+|+.+. .+.++++.+.|+.||++++
T Consensus 273 aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~-dv~~lee~~~~aDvVi~at----G~~~vl~~e~l~~mk~gai 347 (488)
T 3ond_A 273 YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL-QVLTLEDVVSEADIFVTTT----GNKDIIMLDHMKKMKNNAI 347 (488)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCGGGTTTTCSEEEECS----SCSCSBCHHHHTTSCTTEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC-ccCCHHHHHHhcCEEEeCC----CChhhhhHHHHHhcCCCeE
Confidence 99999999999999999999999875332 122 2457889999999998764 3567899999999999999
Q ss_pred EEEeCCCc
Q 042102 231 LINIGRGL 238 (317)
Q Consensus 231 lVN~~rg~ 238 (317)
++|+|++.
T Consensus 348 VvNaG~~~ 355 (488)
T 3ond_A 348 VCNIGHFD 355 (488)
T ss_dssp EEESSSTT
T ss_pred EEEcCCCC
Confidence 99999983
No 73
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.06 E-value=1.5e-10 Score=104.62 Aligned_cols=163 Identities=15% Similarity=0.082 Sum_probs=115.3
Q ss_pred ceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHH
Q 042102 50 IQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDRY 129 (317)
Q Consensus 50 ~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~ 129 (317)
+.++.+ +.++.++++..++++.-++....|+|.++. +.|-. .|+|+.. .+++.++.|
T Consensus 54 ~~G~~v--t~P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g~~----~g~ntd~-----~g~~~~l~~-------- 110 (263)
T 2d5c_A 54 FRGVNL--TLPLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEGRL----FGFNTDA-----PGFLEALKA-------- 110 (263)
T ss_dssp CSEEEE--CTTCTTGGGGGCSEECHHHHHHTCCCEEEE----ETTEE----EEECCHH-----HHHHHHHHH--------
T ss_pred CceEEE--cccCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCCeE----EEeCCCH-----HHHHHHHHH--------
Confidence 445544 346778899999999999999999999975 34422 2455543 233333321
Q ss_pred HHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------CccccCCHHHhcccCCEE
Q 042102 130 VRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------NYKYYPNLIDLASNCQIL 203 (317)
Q Consensus 130 ~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDvV 203 (317)
.+.++.| +++|||+|.+|+.+++.|...|++|.+++|+..... +.. ..+++++ +++|+|
T Consensus 111 ------------~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Div 175 (263)
T 2d5c_A 111 ------------GGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLL 175 (263)
T ss_dssp ------------TTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEE
T ss_pred ------------hCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEE
Confidence 1235789 999999999999999999999999999998754321 111 3567888 999999
Q ss_pred EEeccCCh--hhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 204 VVACSLTE--ETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 204 ~~~lp~~~--~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++++|... .+...+. .+.+++|.+++|++.+. .+. .|.+++++..+.
T Consensus 176 i~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p-~~t-~l~~~a~~~g~~ 224 (263)
T 2d5c_A 176 VNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRP-LWT-RFLREAKAKGLK 224 (263)
T ss_dssp EECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSS-SSC-HHHHHHHHTTCE
T ss_pred EEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCC-ccc-HHHHHHHHCcCE
Confidence 99999773 3334453 46689999999999874 344 477777765554
No 74
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.06 E-value=4.8e-11 Score=111.94 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=91.1
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhccc
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIV 217 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li 217 (317)
..+.+++|||||+|.||+.+|+.|+..|++|.+++++.... .+.... ++++++++||+|++++|.... ..++
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~-~~v~ 89 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQ-GRLY 89 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHH-HHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHH-HHHH
Confidence 45889999999999999999999999999999999876431 233223 788999999999999996653 5555
Q ss_pred cHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCc----ccCC---CCceEEcccCC
Q 042102 218 NRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPE----ELIG---LENVVLLPHVA 285 (317)
Q Consensus 218 ~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~----~L~~---~pnvi~tPH~a 285 (317)
.++....|++|+++++++ | +.. ....+. ....+||+...|..+. .++. -.++++|||..
T Consensus 90 ~~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 90 KEEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 445667799999999874 3 222 111111 1223455555554332 2444 56788999954
No 75
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.04 E-value=2.9e-10 Score=111.47 Aligned_cols=109 Identities=13% Similarity=0.218 Sum_probs=90.1
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----C----CccccCCHHHhccc---CCEEEEeccCChhh
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----L----NYKYYPNLIDLASN---CQILVVACSLTEET 213 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~----~~~~~~~l~el~~~---aDvV~~~lp~~~~t 213 (317)
...++|||||+|.||+.+|+.|...|++|.+|+|++... . +.....+++++++. +|+|++++|....+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 456789999999999999999999999999999976431 1 33445688888876 99999999998788
Q ss_pred hccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 214 QHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+.++ ++..+.+++|.++||++.|...+.+.+.+.+.+..+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 8877 4667789999999999999988888888888876554
No 76
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.03 E-value=3.3e-10 Score=103.67 Aligned_cols=107 Identities=16% Similarity=0.266 Sum_probs=87.5
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc--HHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN--RQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~--~~~ 221 (317)
++|+|||+|.||+.+++.|...|++|.++++++... .+.....+++++++++|+|++++|....++.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 489999999999999999999999999999875432 2334456888999999999999998777776663 345
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+.+++|.++|+++.|...+.+.|.+.+.+..+.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5778999999999999887788898888775443
No 77
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.03 E-value=3.8e-10 Score=102.96 Aligned_cols=106 Identities=8% Similarity=0.109 Sum_probs=85.6
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccH--HH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR--QV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~--~~ 221 (317)
++|||||+|.||+.+++.|...|++|.+++ ++... .+.....+++++++++|+|++++|....+..++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999998 65432 13334567889999999999999987766666542 44
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+.+++|.++|+++.|...+.+.+.+.+.+..+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5678999999999999878888899888874443
No 78
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.02 E-value=2.9e-10 Score=106.76 Aligned_cols=130 Identities=12% Similarity=0.123 Sum_probs=87.6
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhccc----CCEEEEeccCChhhhccccH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASN----CQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~----aDvV~~~lp~~~~t~~li~~ 219 (317)
++|||||+|.||+++|+.|+..|++|.+||+++... .+.....++++++++ ||+|++++|. ..+..++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~- 86 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD- 86 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH-
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH-
Confidence 589999999999999999999999999999876432 233335678877764 7999999995 45666662
Q ss_pred HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee---CCCCC---CCCC-cccCCCCceEEcccCC
Q 042102 220 QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD---VFEHE---PDVP-EELIGLENVVLLPHVA 285 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD---V~~~E---P~~~-~~L~~~pnvi~tPH~a 285 (317)
.+..+++|++++|++.-..--.+++.+.+. ... .++ ++..| |... ..|+.-.++++||+-.
T Consensus 87 -~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~--~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~ 154 (341)
T 3ktd_A 87 -AVHTHAPNNGFTDVVSVKTAVYDAVKARNM--QHR--YVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQL 154 (341)
T ss_dssp -HHHHHCTTCCEEECCSCSHHHHHHHHHTTC--GGG--EECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGG
T ss_pred -HHHccCCCCEEEEcCCCChHHHHHHHHhCC--CCc--EecCCccccccccchhhhhhHHhcCCeEEEEeCCC
Confidence 344469999999998755322233333322 122 222 22222 1111 2588888899999743
No 79
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.01 E-value=1.5e-10 Score=103.50 Aligned_cols=92 Identities=17% Similarity=0.282 Sum_probs=66.9
Q ss_pred ccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC--------------C------CCccccCCHHHhcccCC
Q 042102 142 MTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP--------------N------LNYKYYPNLIDLASNCQ 201 (317)
Q Consensus 142 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~--------------~------~~~~~~~~l~el~~~aD 201 (317)
...++.+++|||||+|.||+.+|+.|...|++|.+|+|+++. . .+.....++.+++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 456899999999999999999999999999999999987654 0 11223457889999999
Q ss_pred EEEEeccCChhhhccccHHH-HhccCCCcEEEEeCC
Q 042102 202 ILVVACSLTEETQHIVNRQV-INALGPKGVLINIGR 236 (317)
Q Consensus 202 vV~~~lp~~~~t~~li~~~~-l~~mk~gavlVN~~r 236 (317)
+|++++|...... .+. +. ...+ +|.++|+++-
T Consensus 93 vVilavp~~~~~~-~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 93 LVVNATEGASSIA-ALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EEEECSCGGGHHH-HHH-HHCHHHH-TTSEEEECCC
T ss_pred EEEEccCcHHHHH-HHH-Hhhhhhc-CCCEEEECCC
Confidence 9999999765443 222 22 2334 7999999993
No 80
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.01 E-value=4.1e-10 Score=103.11 Aligned_cols=107 Identities=12% Similarity=0.142 Sum_probs=87.5
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhcccc--HHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN--RQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~--~~~ 221 (317)
++|||||+|.||+.+++.|...|++|.++++++... .+.....+++++++++|+|++++|....++.++. ++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 589999999999999999999999999999875421 2334456888999999999999998777777764 355
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+.+++|.++|++++|...+.+.+.+.+.+..+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~ 118 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGID 118 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6778999999999998877778888888775443
No 81
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.99 E-value=8.3e-10 Score=100.51 Aligned_cols=165 Identities=16% Similarity=0.171 Sum_probs=112.8
Q ss_pred CceEEEEeCCCCCCHHHHhcCCCceEEEECCCCCCcCChhhHhhCCcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHH
Q 042102 49 SIQAVVGSAAAGADAELIESLPKLEIVATCSVGLDKIDLARCKEKGIRVANTPDVLTDDVADLAIGLILAVLRRICESDR 128 (317)
Q Consensus 49 ~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~ 128 (317)
+++++.++ .+..++++..++.+.-.+....++|.++. +.|-. .|+|+... +++.++.+
T Consensus 65 ~~~G~nvt--iP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~~----~g~nTd~~-----G~~~~l~~------- 122 (275)
T 2hk9_A 65 KVKGINVT--VPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGKA----YGYNTDWI-----GFLKSLKS------- 122 (275)
T ss_dssp TCCEEEEC--TTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTEE----EEECCHHH-----HHHHHHHH-------
T ss_pred CCCEEEEC--ccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCEE----EeecCCHH-----HHHHHHHH-------
Confidence 46677664 45667788888888888888888888754 34522 24555332 33333321
Q ss_pred HHHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccccCCHHHhcccCCE
Q 042102 129 YVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKYYPNLIDLASNCQI 202 (317)
Q Consensus 129 ~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~l~el~~~aDv 202 (317)
.+.++.|++++|||.|.+|+.+++.|...|++|.+++|+.... .+.....++.++++++|+
T Consensus 123 -------------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDi 189 (275)
T 2hk9_A 123 -------------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQV 189 (275)
T ss_dssp -------------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSE
T ss_pred -------------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCE
Confidence 0224788999999999999999999999999999999875421 122223478888999999
Q ss_pred EEEeccCChh--hhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 203 LVVACSLTEE--TQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 203 V~~~lp~~~~--t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
|++++|.... +...++ ++.+++|.++++++. .. ..+.+..++..+.
T Consensus 190 Vi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~---~~-t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 190 IVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY---KE-TKLLKKAKEKGAK 237 (275)
T ss_dssp EEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS---SC-CHHHHHHHHTTCE
T ss_pred EEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC---Ch-HHHHHHHHHCcCE
Confidence 9999997642 223443 456899999999988 33 3455555544443
No 82
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.98 E-value=4.2e-10 Score=102.77 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=82.7
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccH--HH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR--QV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~--~~ 221 (317)
++|||||+|.||+.+++.|...|++|.+|++++... .+.....+++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999999876532 23334568889999999999999988777776643 24
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
++.+++|.++|+++....-+.+.+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999998877776666777777653
No 83
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.2e-09 Score=107.63 Aligned_cols=106 Identities=13% Similarity=0.200 Sum_probs=89.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----------CCccccCCHHHhccc---CCEEEEeccCChhhhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----------LNYKYYPNLIDLASN---CQILVVACSLTEETQH 215 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~l~el~~~---aDvV~~~lp~~~~t~~ 215 (317)
.+|||||+|.||+.+|..|...|++|.+|+|++... .+.....+++++++. +|+|++++|....++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 90 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDA 90 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHH
Confidence 489999999999999999999999999999986432 123345688888876 9999999998888888
Q ss_pred cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 216 IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++ ++..+.+++|.++|+++.+...+.+.+.+.+.+..+.
T Consensus 91 vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 91 LI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 77 5667789999999999999888888888888875554
No 84
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.97 E-value=9.6e-10 Score=101.58 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=86.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccH--HH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR--QV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~--~~ 221 (317)
++|||||+|.||+.+|+.|...|++|.++++++... .+.....++.++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999876542 23334567889999999999999977777666543 24
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++.+++|.++|+++++.....+.+.+.+....+.
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~ 144 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGR 144 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 5678999999999998877778888888665444
No 85
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.95 E-value=7.9e-10 Score=100.45 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=83.3
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
++|||||+|.||+.+++.|.. |++|.++++++.... +..... ++++++++|+|++++|....+..++ ++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 999999998764321 122223 6788899999999999776676655 45567
Q ss_pred ccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 224 ALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+++|.++|+++.+...+.+.+.+.+.+..+.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 110 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVT 110 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 78999999999998888888899988875443
No 86
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.95 E-value=4.6e-09 Score=95.08 Aligned_cols=139 Identities=16% Similarity=0.158 Sum_probs=92.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCc--cccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNY--KYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~--~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
++|+|||+|.||+.+++.|...|++|.++++++... .+. ....+++++ +++|+|++++|.. .+..++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~-~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ-LILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH-HHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH-HHHHHH-HHH
Confidence 479999999999999999999999999999875421 121 124577888 9999999999943 445555 345
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCC---CCCCc-ccCCCCceEEcccCCCccHHHHHH
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHE---PDVPE-ELIGLENVVLLPHVASATVETRKA 294 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~E---P~~~~-~L~~~pnvi~tPH~a~~t~~~~~~ 294 (317)
.+.+++++++|+++.......+.+.+.+. ++-+. .-++..+ |.... .++.-+.++++|+-++ +.+..+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~-~~~~~~~ 150 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT-DPEQLAC 150 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTC-CHHHHHH
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCC-CHHHHHH
Confidence 56789999999997766555555555433 33221 1233212 22112 4667778899997543 4444333
No 87
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.90 E-value=1.4e-09 Score=106.19 Aligned_cols=130 Identities=11% Similarity=0.131 Sum_probs=92.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC--CCEEEEeCCCCCCC------------------------CCccccCCHHHhcccCCE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF--DCIIGYNSRTEKPN------------------------LNYKYYPNLIDLASNCQI 202 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~------------------------~~~~~~~~l~el~~~aDv 202 (317)
++|+|||+|.||..+|..|... |++|.++|++++.. .+.....++.+.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999887 89999999865321 012223577888999999
Q ss_pred EEEeccCChhhhccc-------------cHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee---CCCCCC
Q 042102 203 LVVACSLTEETQHIV-------------NRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD---VFEHEP 266 (317)
Q Consensus 203 V~~~lp~~~~t~~li-------------~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD---V~~~EP 266 (317)
|++|+|......+.+ .+...+.|++|+++|++|+..+-..+.+.+.+++.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 999998654433211 13355678999999999998887778888888875422 233 345565
Q ss_pred CCCc----ccCCCCceEE
Q 042102 267 DVPE----ELIGLENVVL 280 (317)
Q Consensus 267 ~~~~----~L~~~pnvi~ 280 (317)
..+. .+...+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 5443 3566777764
No 88
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.90 E-value=2.8e-09 Score=99.20 Aligned_cols=137 Identities=14% Similarity=0.070 Sum_probs=92.0
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----------------CC--------------ccccCCHHHhc
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----------------LN--------------YKYYPNLIDLA 197 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~--------------~~~~~~l~el~ 197 (317)
-++|||||.|.||..+|..+...|++|.+||+++... .+ .....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 3689999999999999999999999999999876421 01 12356889999
Q ss_pred ccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCc
Q 042102 198 SNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLEN 277 (317)
Q Consensus 198 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pn 277 (317)
++||+|+.++|.+.+...-+-++..+.+++++++++.+.+ +....+.+.+.. +-+..+...+. |. ...+-
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~-----~~~~l 155 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PP-----YYIPL 155 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--ST-----TTCCE
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--ch-----hhcce
Confidence 9999999999988766544445677788999999876655 344566665532 22323333333 22 12345
Q ss_pred eEEcccCCCccHHHHHHH
Q 042102 278 VVLLPHVASATVETRKAM 295 (317)
Q Consensus 278 vi~tPH~a~~t~~~~~~~ 295 (317)
+.++|+-. .+.+..+++
T Consensus 156 veiv~g~~-t~~e~~~~~ 172 (319)
T 2dpo_A 156 VELVPHPE-TSPATVDRT 172 (319)
T ss_dssp EEEEECTT-CCHHHHHHH
T ss_pred EEEeCCCC-CCHHHHHHH
Confidence 66777633 334444433
No 89
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.90 E-value=1.2e-09 Score=105.88 Aligned_cols=93 Identities=17% Similarity=0.393 Sum_probs=72.3
Q ss_pred cccccC-CeEEEEecChhHHHHHHHHhhC------CCEEEEeCCC-CCCC-----CCccc----cCCHHHhcccCCEEEE
Q 042102 143 TTKFTG-KSVGILGMGRIGTAIAKRAEAF------DCIIGYNSRT-EKPN-----LNYKY----YPNLIDLASNCQILVV 205 (317)
Q Consensus 143 ~~~l~g-~~vgIiG~G~iG~~~a~~l~~~------G~~V~~~~~~-~~~~-----~~~~~----~~~l~el~~~aDvV~~ 205 (317)
...|+| ++|||||+|.||+++|+.|+.. |++|++..+. .+.. .+... ..++.+++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 467899 9999999999999999999987 9988755443 2211 23322 2578999999999999
Q ss_pred eccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 206 ACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 206 ~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
++|..... .++. +.++.||+|++ |..+.|-
T Consensus 128 aVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 128 LISDAAQA-DNYE-KIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp CSCHHHHH-HHHH-HHHHHSCTTCE-EEESSSH
T ss_pred CCChHHHH-HHHH-HHHHhcCCCCe-EEEeCCC
Confidence 99987664 4665 68899999999 5777773
No 90
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.89 E-value=3.9e-09 Score=97.01 Aligned_cols=134 Identities=17% Similarity=0.138 Sum_probs=89.4
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------------CccccCCHHHhcccCCEEEEeccCChhh
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------------NYKYYPNLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~l~el~~~aDvV~~~lp~~~~t 213 (317)
-+.|+|||||+|.||..||..+. .|++|.+||+++.... +.....++++ +++||+|+.++|.+.+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 46789999999999999999999 9999999999864321 1223456666 89999999999999887
Q ss_pred hccccHHHHhccCCCcEEE-EeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHH
Q 042102 214 QHIVNRQVINALGPKGVLI-NIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETR 292 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlV-N~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~ 292 (317)
+..+-++ ++.+ ++++++ |+|.-+ ...+.+.+. ...+..++-.|. |. ...+-+.++|+-. .+.+..
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~---~~~~a~~~~-~~~r~~G~Hf~~--Pv-----~~~~lveiv~g~~-t~~~~~ 153 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVIS---VDDIAERLD-SPSRFLGVHWMN--PP-----HVMPLVEIVISRF-TDSKTV 153 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSC---HHHHHTTSS-CGGGEEEEEECS--ST-----TTCCEEEEEECTT-CCHHHH
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcC---HHHHHHHhh-cccceEeEEecC--cc-----ccCCEEEEECCCC-CCHHHH
Confidence 6655333 5667 999985 777644 344444332 223334555554 32 3356677887532 344444
Q ss_pred HHH
Q 042102 293 KAM 295 (317)
Q Consensus 293 ~~~ 295 (317)
++.
T Consensus 154 ~~~ 156 (293)
T 1zej_A 154 AFV 156 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 91
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.89 E-value=2.6e-09 Score=104.74 Aligned_cols=106 Identities=10% Similarity=0.163 Sum_probs=86.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----------CCccccCCHHHhcc---cCCEEEEeccCChhhhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----------LNYKYYPNLIDLAS---NCQILVVACSLTEETQH 215 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~l~el~~---~aDvV~~~lp~~~~t~~ 215 (317)
++|||||+|.||+.+|..|...|++|.+|+|++... .+.....+++++++ .+|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 579999999999999999999999999999876431 12334567888864 89999999998877887
Q ss_pred cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 216 IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++ ++....+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 77 3566789999999999999887878888888775554
No 92
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.88 E-value=2.3e-09 Score=105.01 Aligned_cols=106 Identities=16% Similarity=0.265 Sum_probs=87.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----C----CccccCCHHHhccc---CCEEEEeccCChhhhcc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----L----NYKYYPNLIDLASN---CQILVVACSLTEETQHI 216 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~----~~~~~~~l~el~~~---aDvV~~~lp~~~~t~~l 216 (317)
++|||||+|.||+.+|+.|...|++|.+|+|++... . +.....+++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 589999999999999999999999999999875431 1 33345688888776 99999999988777777
Q ss_pred ccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 217 VNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 217 i~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+ ++....+++|.++|+++.|...+.+.+.+.+.+..+.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 7 4566789999999999999877888888888765554
No 93
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.37 E-value=2.6e-10 Score=99.28 Aligned_cols=90 Identities=16% Similarity=0.184 Sum_probs=72.0
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
+.+++|||||+|.||+.+++.|...|++|.+++|+.... .+.. ..++.++++++|+|++++|.. .++.++ .
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~-~~~~~~~~~~aDvVilav~~~-~~~~v~---~ 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAE-VLCYSEAASRSDVIVLAVHRE-HYDFLA---E 91 (201)
Confidence 677899999999999999999999999999999876521 1112 236778899999999999975 566665 2
Q ss_pred HhccCCCcEEEEeCCCccc
Q 042102 222 INALGPKGVLINIGRGLLV 240 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~v 240 (317)
+..+++++++||+++|-..
T Consensus 92 l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 4556789999999999864
No 94
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.85 E-value=4.7e-09 Score=102.87 Aligned_cols=106 Identities=16% Similarity=0.247 Sum_probs=86.6
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CC-------ccccCCHHHhcc---cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LN-------YKYYPNLIDLAS---NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~-------~~~~~~l~el~~---~aDvV~~~lp~~~~ 212 (317)
++|||||+|.||+.+|..|...|++|.+|+|++... .+ .....+++++++ .+|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 479999999999999999999999999999875421 12 234567888877 49999999998877
Q ss_pred hhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++.++ ++....+++|.++|+++.|...+.+.+.+.+.+..+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLR 123 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCe
Confidence 77777 4566788999999999999887888888888876554
No 95
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.84 E-value=5.8e-09 Score=91.04 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=63.4
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
.++.+++|+|||+|.||+.+|+.|...|.+|.+++++++ .+++||+|++++| ...++.++. +..+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------~~~~aD~vi~av~-~~~~~~v~~-~l~~ 79 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------ATTLGEIVIMAVP-YPALAALAK-QYAT 79 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------CSSCCSEEEECSC-HHHHHHHHH-HTHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------HhccCCEEEEcCC-cHHHHHHHH-HHHH
Confidence 357889999999999999999999999999999998754 5678999999999 666666653 3445
Q ss_pred ccCCCcEEEEeCCCcc
Q 042102 224 ALGPKGVLINIGRGLL 239 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~ 239 (317)
.++ ++++|++++|--
T Consensus 80 ~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHT-TSEEEECCCCBC
T ss_pred hcC-CCEEEEECCCCC
Confidence 677 999999999765
No 96
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.83 E-value=1.8e-08 Score=97.95 Aligned_cols=176 Identities=15% Similarity=0.139 Sum_probs=107.7
Q ss_pred CCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCc----ccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEE
Q 042102 101 PDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGE----FKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGY 176 (317)
Q Consensus 101 ~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~----~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~ 176 (317)
.|.|-..|.|.+.++++..-| ..++|...+ +.....-.=++|||||.|.||..+|..+...|++|.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~---------~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 12 TGENLYFQGSEVRSYLMEAHS---------LAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp TSGGGGGCBCHHHHHHHHTTC---------CTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccchhhhhHHHHHHHHhHHH---------hhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 344555566666666666222 234576321 1111111236899999999999999999999999999
Q ss_pred eCCCCCCC-------------CC-------------ccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcE
Q 042102 177 NSRTEKPN-------------LN-------------YKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGV 230 (317)
Q Consensus 177 ~~~~~~~~-------------~~-------------~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gav 230 (317)
+|++++.. .+ .....+++ .+++||+|+.++|.+.+.+.-+-++..+.++++++
T Consensus 83 ~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aI 161 (460)
T 3k6j_A 83 VVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCI 161 (460)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCE
T ss_pred EECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCE
Confidence 99876510 11 01234564 68999999999998877665444667778999999
Q ss_pred EEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHH
Q 042102 231 LINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMAD 297 (317)
Q Consensus 231 lVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~ 297 (317)
|++.+.+ +....+.+.+.. +-+..++..|. |.. ..+-+.+.|+-. .+.+..+++..
T Consensus 162 lasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~-----~m~LvEIv~g~~-Ts~e~~~~~~~ 217 (460)
T 3k6j_A 162 FGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN-----VIRLVEIIYGSH-TSSQAIATAFQ 217 (460)
T ss_dssp EEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT-----TCCEEEEECCSS-CCHHHHHHHHH
T ss_pred EEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh-----hCCEEEEEeCCC-CCHHHHHHHHH
Confidence 9654443 344555555432 33445666665 322 234466777522 34444444433
No 97
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.81 E-value=2.2e-09 Score=96.66 Aligned_cols=97 Identities=12% Similarity=0.284 Sum_probs=75.2
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCE-EEEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhc
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCI-IGYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQH 215 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~-V~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~ 215 (317)
.+++.+++|||||+|.||+.+++.+...|++ |.+++++++.. .+.....+++++++++|+|++++|... ...
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~-~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA-FAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH-HHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH-HHH
Confidence 3456678999999999999999999988998 88999875432 133345678899999999999999663 344
Q ss_pred cccHHHHhccCCCcEEEEeCCCcccC
Q 042102 216 IVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
++ ++..+.+++|+++|+++.|...+
T Consensus 84 v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 84 LL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp HH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred HH-HHHHhhcCCCcEEEECCCCCchH
Confidence 44 34556788999999999987654
No 98
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.80 E-value=3.5e-09 Score=95.15 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=76.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCC--CCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRT--EKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~--~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
++|||||+|.||+.+++.|...|++|.++++. +... .+.. .++++++++||+|++++|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 47999999999999999999999999998873 2111 1222 56788899999999999987665554 456
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
.+.+++ ++|+++.+...+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 667776 99999988777777888877653
No 99
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.78 E-value=6.4e-09 Score=98.32 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=81.2
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------CccccCCHHHhcc-cCCEEEEeccCChhhhccc
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------NYKYYPNLIDLAS-NCQILVVACSLTEETQHIV 217 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~-~aDvV~~~lp~~~~t~~li 217 (317)
+|.|++|+|+|+|+||+.+|++|..+|++|+++|++..... +.. ..+.++++. +||+++.|. +.++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~-~v~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD-AVAPNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE-ECCGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEChHHHhccCCcEeeccc-----hHHHh
Confidence 68999999999999999999999999999999998654221 221 235566665 899998773 57788
Q ss_pred cHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 218 NRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 218 ~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+.+.++.|+ ..++++.+++.+.+++ ..+.|+++.+.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 888888884 5788999999988865 55677777764
No 100
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.76 E-value=1.1e-07 Score=89.70 Aligned_cols=211 Identities=12% Similarity=0.068 Sum_probs=130.1
Q ss_pred CCChhHHHHHHh-cCeEEEecCCC---C--hHHHH----------hhccCCceEEEEeCCCCCCHHHHhcCCCceEEEEC
Q 042102 15 PVSNYLEQEIEK-SFKVFKLWHFE---D--KEQFI----------NTHKDSIQAVVGSAAAGADAELIESLPKLEIVATC 78 (317)
Q Consensus 15 ~~~~~~~~~l~~-~~~~~~~~~~~---~--~~~~~----------~~~~~~~~~ii~~~~~~~~~~~l~~~~~Lk~i~~~ 78 (317)
++.|+..++|.+ .+++..-.... . ++++. .+.+ ++|+|+. ...+...+.....+++.++...
T Consensus 17 ~~~P~~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~-~ad~i~~-vksP~~~~~~~~~~g~~~~~y~ 94 (361)
T 1pjc_A 17 GLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAW-SREMVVK-VKEPLPAEYDLMQKDQLLFTYL 94 (361)
T ss_dssp SCCHHHHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHH-TSSEEEC-SSCCCGGGGGGCCTTCEEEECC
T ss_pred CcCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHh-cCCeEEE-ECCCCHHHHHhhcCCCEEEEEe
Confidence 467888888855 57765422111 1 23332 1223 5787664 3444433433334677677666
Q ss_pred CCCCCcCChhhHhhCCcEEEeC---CCCC-----cHHHHHHHH--HHHHHHhhchhHHHHHHHcC--CCccCcccccccc
Q 042102 79 SVGLDKIDLARCKEKGIRVANT---PDVL-----TDDVADLAI--GLILAVLRRICESDRYVRSG--EWKKGEFKMTTKF 146 (317)
Q Consensus 79 ~~G~d~id~~~~~~~gI~v~n~---~~~~-----~~~vAE~al--~~~L~~~r~~~~~~~~~~~~--~w~~~~~~~~~~l 146 (317)
...++.-.++.+.++|+...|. |... -.++++.+- +.++.+ .++... ..| .+.. .. ..+
T Consensus 95 ~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA-~nt~~~----~~g~G~~l~---~l-~~l 165 (361)
T 1pjc_A 95 HLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGA-RFLERQ----QGGRGVLLG---GV-PGV 165 (361)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHH-HHTSGG----GTSCCCCTT---CB-TTB
T ss_pred ccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHH-HHHhhc----cCCCceecc---CC-CCC
Confidence 6666665567788889888763 4321 245555443 334433 222111 111 1100 01 247
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----Cccc-------cCCHHHhcccCCEEEEeccCCh-hh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYKY-------YPNLIDLASNCQILVVACSLTE-ET 213 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-------~~~l~el~~~aDvV~~~lp~~~-~t 213 (317)
.+++|.|+|.|.+|+.+++.++.+|++|.++++++.+.. .... ..++.+.+..+|+|+.+++... ..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 789999999999999999999999999999998764321 0011 1245567789999999887543 23
Q ss_pred hccccHHHHhccCCCcEEEEeCC
Q 042102 214 QHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~r 236 (317)
..++.++.++.|++|+++||++-
T Consensus 246 ~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 246 PILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCBCHHHHTTSCTTCEEEETTC
T ss_pred CeecCHHHHhhCCCCCEEEEEec
Confidence 45568889999999999999974
No 101
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.72 E-value=3e-08 Score=95.72 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=81.2
Q ss_pred cccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----C-------------------CccccCCHHHhc
Q 042102 141 KMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----L-------------------NYKYYPNLIDLA 197 (317)
Q Consensus 141 ~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~-------------------~~~~~~~l~el~ 197 (317)
.++++..-++|+|||+|.||..+|..|.. |.+|++||+++... . ......++.+++
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 35667777899999999999999999988 99999999875421 0 122346788999
Q ss_pred ccCCEEEEeccCChh----------hhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCc
Q 042102 198 SNCQILVVACSLTEE----------TQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRL 254 (317)
Q Consensus 198 ~~aDvV~~~lp~~~~----------t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i 254 (317)
+.||+|++++|.... .+..+ +...+ +++|+++|+.|.-.+--.+.+.+.+.+..+
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~-~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVI-RDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHH-HHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHH-HHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 999999999996532 12111 44556 999999999998887777888888876544
No 102
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.70 E-value=1.4e-08 Score=82.92 Aligned_cols=85 Identities=20% Similarity=0.287 Sum_probs=68.0
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------C--ccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------N--YKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~--~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
|++|+|||.|.||+.+++.|+..|++|.+++++..... + .....++.++++++|+|+.++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 88999999999999999999999999999998764321 1 123567889999999999999966 234554
Q ss_pred HHHhccCCCcEEEEeCCCc
Q 042102 220 QVINALGPKGVLINIGRGL 238 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~ 238 (317)
+.+++|.+++|++...
T Consensus 98 ---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp ---GGCCTTCEEEECCSSC
T ss_pred ---HHcCCCCEEEEccCCc
Confidence 4568899999998754
No 103
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.70 E-value=7.9e-08 Score=88.22 Aligned_cols=99 Identities=15% Similarity=0.148 Sum_probs=71.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC----------------C------------------ccccCCHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL----------------N------------------YKYYPNLI 194 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~------------------~~~~~~l~ 194 (317)
++|+|||+|.||..+|..+...|++|.++|+++.... + .....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 5899999999999999999999999999998753210 0 11245777
Q ss_pred HhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHH
Q 042102 195 DLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSAL 249 (317)
Q Consensus 195 el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al 249 (317)
+.++.||+|++++|...+...-+-++..+.++++++++....+- ..+.+.+.+
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~ 148 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANAT 148 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhc
Confidence 88999999999999876544333344555688899988654443 334555544
No 104
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.66 E-value=5.7e-08 Score=79.38 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=80.3
Q ss_pred cccCCeEEEEec----ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHH
Q 042102 145 KFTGKSVGILGM----GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 145 ~l~g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~ 220 (317)
-++-++|+|||. |.+|+.+++.|...|++|+.+++......+...+.+++|+....|++++++| .+....++. +
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~-~ 88 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAK-E 88 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHH-H
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHH-H
Confidence 356779999999 9999999999999999988888876544566667889999999999999999 466666664 3
Q ss_pred HHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 221 VINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 221 ~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
..+ ...++++++++. ..+.+.+..++..+.
T Consensus 89 ~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 89 AVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 333 566777777643 257788888887776
No 105
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.64 E-value=2.4e-07 Score=82.83 Aligned_cols=99 Identities=22% Similarity=0.376 Sum_probs=70.9
Q ss_pred CCeEEEEecChhHHHHHHHHhhCC----CEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFD----CIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
.++|||||+|.||+.+++.|...| .+|.+|+++++. .+.....+..+++++||+|++++|. ..+..++. +..+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~~-~l~~ 80 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVLN-NIKP 80 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHHH-HSGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHHH-HHHH
Confidence 468999999999999999998888 689999988765 3444456788999999999999994 44555442 3444
Q ss_pred ccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 224 ALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
.++ +.++|....| ++.+.+.+.+..+
T Consensus 81 ~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 81 YLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp GCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred hcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 564 5555555444 3345666666543
No 106
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.63 E-value=8.6e-08 Score=92.69 Aligned_cols=102 Identities=9% Similarity=0.090 Sum_probs=76.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------------------------CC-ccccCCHHHhcccCCEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------------------------LN-YKYYPNLIDLASNCQIL 203 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------------------------~~-~~~~~~l~el~~~aDvV 203 (317)
++|+|||+|.||..+|..|...|.+|.++|++++.. .+ .....++++.++.||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 479999999999999999999999999999865321 01 22345778889999999
Q ss_pred EEeccCChh---------hhccccHHHHhccCC---CcEEEEeCCCcccC-HHHHHHHHHh
Q 042102 204 VVACSLTEE---------TQHIVNRQVINALGP---KGVLINIGRGLLVD-EHELVSALLQ 251 (317)
Q Consensus 204 ~~~lp~~~~---------t~~li~~~~l~~mk~---gavlVN~~rg~~vd-~~aL~~al~~ 251 (317)
++++|.... +...+ +...+.+++ +.++|+.|...+-. .+.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999996654 33322 344556888 99999998766545 5667777765
No 107
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.63 E-value=1.7e-08 Score=88.30 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=68.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
.+++|+|||+|.||+.+++.|...|.+|.+++|+.+.. .+.... +++++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 45799999999999999999999999999999875421 122222 788889999999999995 34555553
Q ss_pred HhccCCCcEEEEeCCCcccC
Q 042102 222 INALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd 241 (317)
+..+.+++++|++++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 33334799999999987543
No 108
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.59 E-value=3.3e-08 Score=90.04 Aligned_cols=87 Identities=13% Similarity=0.254 Sum_probs=69.0
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
++|||||+ |.||+.+++.|...|++|.++++++... .+.. ..+..+++++||+|++++|... +..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-LTDGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-CCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-cCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 58999999 9999999999999999999999875431 1221 2367788999999999999654 45555 4555
Q ss_pred hccCCCcEEEEeCCCc
Q 042102 223 NALGPKGVLINIGRGL 238 (317)
Q Consensus 223 ~~mk~gavlVN~~rg~ 238 (317)
..+++++++|+++.|.
T Consensus 89 ~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 89 PRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGSCTTCEEEESCSHH
T ss_pred HhCCCCCEEEECCCCc
Confidence 6789999999988876
No 109
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.58 E-value=1.4e-07 Score=91.70 Aligned_cols=102 Identities=9% Similarity=0.128 Sum_probs=76.6
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------------------------C-CccccCCHHHhcccCCEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------------------------L-NYKYYPNLIDLASNCQIL 203 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------------------------~-~~~~~~~l~el~~~aDvV 203 (317)
++|+|||+|.||..+|..|...|.+|.+||+++... . ......+++++++.||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 589999999999999999999999999999875321 0 012346788899999999
Q ss_pred EEeccCCh---------hhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 204 VVACSLTE---------ETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 204 ~~~lp~~~---------~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
++++|... ..+..+ +...+.+++|.++|+.|.-.+-..+.+.+.+++
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998653 333333 456677899999999996554445556555554
No 110
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.58 E-value=4.3e-08 Score=90.76 Aligned_cols=105 Identities=14% Similarity=0.177 Sum_probs=76.1
Q ss_pred cCCeEEEEecChhHHHHHHHHhh-CCC-EEEEeCCCCCCC------CC--ccccCCHHHhcccCCEEEEeccCChhhhcc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEA-FDC-IIGYNSRTEKPN------LN--YKYYPNLIDLASNCQILVVACSLTEETQHI 216 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~-~G~-~V~~~~~~~~~~------~~--~~~~~~l~el~~~aDvV~~~lp~~~~t~~l 216 (317)
.+++|||||+|.||+.+++.+.. +|. +|.+|+|++... .+ .....+++++++++|+|++++|.. ..+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Ccc
Confidence 46799999999999999999865 487 899999976432 12 334578999999999999999953 456
Q ss_pred ccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEee
Q 042102 217 VNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLD 260 (317)
Q Consensus 217 i~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lD 260 (317)
+.. +.+++|.++++++....-. ..+.+.+.+... ..+|
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRPDW-RELDDELMKEAV--LYVD 248 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE--EEES
T ss_pred cCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE--EEEC
Confidence 654 5689999999998765522 333333333222 3667
No 111
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.56 E-value=8.7e-08 Score=85.74 Aligned_cols=96 Identities=19% Similarity=0.287 Sum_probs=73.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
++|||||+|.||+.+++.|...|.+|.++++++... .+.....+++++++++|+|++++| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 589999999999999999999999999999875432 133345678899999999999999 3333 3445
Q ss_pred hccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 223 NALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 223 ~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
..+++|.++|++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55778999999976643 34566666543
No 112
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.56 E-value=7.7e-08 Score=89.28 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=76.2
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCC----CEEEEeCCCCC--CC-----CCccccCCHHHhcccCCEEEEeccCChhhh
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFD----CIIGYNSRTEK--PN-----LNYKYYPNLIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G----~~V~~~~~~~~--~~-----~~~~~~~~l~el~~~aDvV~~~lp~~~~t~ 214 (317)
...++|||||+|.||..+|..|...| .+|.+++|++. .. .+.....+..++++.||+|++++| ...+.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 44568999999999999999999888 78999998864 21 133344578889999999999999 45555
Q ss_pred ccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 215 HIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
.++ ++....++++.++|+++.|-- .+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 555 345556889999999977643 4456666654
No 113
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.56 E-value=5.2e-08 Score=86.87 Aligned_cols=99 Identities=15% Similarity=0.225 Sum_probs=73.6
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC----EEEEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhcccc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC----IIGYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~----~V~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~ 218 (317)
++|||||+|.||+.+++.|...|. +|.+|+|+++.. .+.....+..+++++||+|++++|.. ....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~-~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD-LYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT-THHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH-HHHHHH-
Confidence 589999999999999999999998 999999986532 13344578899999999999999743 344444
Q ss_pred HHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 219 RQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 219 ~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
++....++++.++|.+..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 34555688999999776554 34566666643
No 114
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.53 E-value=4.2e-07 Score=88.14 Aligned_cols=102 Identities=11% Similarity=0.184 Sum_probs=77.7
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CC---------------------ccccCCHHHhcccCCEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LN---------------------YKYYPNLIDLASNCQIL 203 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~---------------------~~~~~~l~el~~~aDvV 203 (317)
-+++|||+|.+|..+|..|...|.+|++||++++.. .+ .....++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 379999999999999999999999999999886531 00 12346788999999999
Q ss_pred EEeccCChh----------hhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 204 VVACSLTEE----------TQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 204 ~~~lp~~~~----------t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
++|+|.... .+..+ +...+.+++|.++|+.|.-.+--.+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999885432 33333 456678999999999986555455666666655
No 115
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.49 E-value=1.3e-07 Score=77.88 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=79.6
Q ss_pred CCeEEEEec----ChhHHHHHHHHhhCCCEEEEeCCCC--CCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 148 GKSVGILGM----GRIGTAIAKRAEAFDCIIGYNSRTE--KPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 148 g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
-++|+|||+ |.+|..+++.|+..|++|+.+++.. ....+...+.++.++....|++++++| .+....++. +.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~-~~ 90 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ-EA 90 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-HH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 678999999 8999999999999999988888876 444455667789999899999999999 466666664 33
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceE
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGG 256 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~g 256 (317)
.+ ...++++++.+ .. ++.+.+.+++..+.-
T Consensus 91 ~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~~ 120 (145)
T 2duw_A 91 IA-IGAKTLWLQLG--VI--NEQAAVLAREAGLSV 120 (145)
T ss_dssp HH-HTCCEEECCTT--CC--CHHHHHHHHTTTCEE
T ss_pred HH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCEE
Confidence 33 56677888753 22 678888888888773
No 116
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.47 E-value=2.1e-07 Score=84.81 Aligned_cols=106 Identities=15% Similarity=0.127 Sum_probs=78.1
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC---EEEEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhcccc
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC---IIGYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~---~V~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~ 218 (317)
.++|||||+|+||+.+++.+...|+ +|.+++|++... .+.....+..+++++||+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4689999999999999999999898 899999986532 1344456888999999999999974 3344444
Q ss_pred HHHHhc-cCCCcEEEEeCCCcccCHHHHHHHHHh-CCceEE
Q 042102 219 RQVINA-LGPKGVLINIGRGLLVDEHELVSALLQ-GRLGGA 257 (317)
Q Consensus 219 ~~~l~~-mk~gavlVN~~rg~~vd~~aL~~al~~-g~i~ga 257 (317)
++.-.. ++++.++|++.-|-- .+.|.+.+.. .++.++
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi~--~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGVT--TPLIEKWLGKASRIVRA 119 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTCC--HHHHHHHHTCCSSEEEE
T ss_pred HHHHhhccCCCeEEEEecCCCC--HHHHHHHcCCCCeEEEE
Confidence 334444 688889998876643 4677777754 244433
No 117
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.47 E-value=2.9e-07 Score=90.17 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=88.2
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----------------CCc-------------cccCCHHHhccc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----------------LNY-------------KYYPNLIDLASN 199 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~~-------------~~~~~l~el~~~ 199 (317)
++|||||+|.||..+|..+...|++|.++|++++.. .+. ....+++ .+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~ 84 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALAA 84 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-HhcC
Confidence 589999999999999999999999999999876421 110 1234554 6899
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEE-EEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCce
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVL-INIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENV 278 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavl-VN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnv 278 (317)
||+|+.++|.+.+...-+-++..+.+++++++ .|+|.- ....+.+.+. ..-...++..|.+-|. .+-+
T Consensus 85 aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti---~i~~ia~~~~-~p~~~ig~hf~~Pa~v-------~~Lv 153 (483)
T 3mog_A 85 ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI---SITAIAAEIK-NPERVAGLHFFNPAPV-------MKLV 153 (483)
T ss_dssp CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS---CHHHHTTTSS-SGGGEEEEEECSSTTT-------CCEE
T ss_pred CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC---CHHHHHHHcc-CccceEEeeecChhhh-------CCeE
Confidence 99999999988766543445566778999998 466653 3345555443 2333456666654332 2446
Q ss_pred EEcccCCCccHHHHHHH
Q 042102 279 VLLPHVASATVETRKAM 295 (317)
Q Consensus 279 i~tPH~a~~t~~~~~~~ 295 (317)
.+.|+-. .+.+..+++
T Consensus 154 evv~g~~-Ts~e~~~~~ 169 (483)
T 3mog_A 154 EVVSGLA-TAAEVVEQL 169 (483)
T ss_dssp EEEECSS-CCHHHHHHH
T ss_pred EEecCCC-CCHHHHHHH
Confidence 6666532 234443333
No 118
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.46 E-value=9e-08 Score=85.69 Aligned_cols=96 Identities=19% Similarity=0.224 Sum_probs=69.3
Q ss_pred CeEEEEecChhHHHHHHHHhhCC-CEEEEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD-CIIGYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
++|||||+|.||+.+++.|...| .+|.+++|+++.. .+.....++.+++ ++|+|++++| ......++.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~-- 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKN-- 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTT--
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHH--
Confidence 47999999999999999999889 8999999875432 1333345667778 9999999999 5554444421
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
+.. + +.++|+++.|-- .+.+.+.+..+
T Consensus 77 l~~-~-~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 77 IRT-N-GALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp CCC-T-TCEEEECCTTCC--HHHHHHHTTSC
T ss_pred hcc-C-CCEEEEecCCCC--HHHHHHHcCCC
Confidence 122 4 899999865543 36677766653
No 119
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.46 E-value=3.4e-07 Score=83.29 Aligned_cols=126 Identities=15% Similarity=0.204 Sum_probs=88.2
Q ss_pred cccccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 143 TTKFTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
+.+++|+++.|||.|. +|+.+|+.|...|++|+++++.. .++.+.+++||+|+.+++ ..++|.++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg----~p~lI~~~~ 220 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------KNLRHHVENADLLIVAVG----KPGFIPGDW 220 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------SCHHHHHHHCSEEEECSC----CTTCBCTTT
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhccCCEEEECCC----CcCcCCHHH
Confidence 3469999999999997 59999999999999999886432 478999999999999998 334687766
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHHH
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVVG 301 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~~ 301 (317)
+|+|+++||+|.-.+-| |++ .-||-..+ ..+. --.+||==||...-...-+.+.+++
T Consensus 221 ---vk~GavVIDVgi~r~~~----------g~l---~GDVdf~~------v~~~-a~~iTPVPGGVGpmT~a~Ll~Ntv~ 277 (288)
T 1b0a_A 221 ---IKEGAIVIDVGINRLEN----------GKV---VGDVVFED------AAKR-ASYITPVPGGVGPMTVATLIENTLQ 277 (288)
T ss_dssp ---SCTTCEEEECCCEECTT----------SCE---ECSBCHHH------HHHH-CSEECCSSSSSHHHHHHHHHHHHHH
T ss_pred ---cCCCcEEEEccCCccCC----------CCc---cCCcCHHH------Hhhh-ccEecCCCCCccHHHHHHHHHHHHH
Confidence 48999999999765432 444 45663211 1111 2268887777665443333333333
Q ss_pred HHH
Q 042102 302 NLQ 304 (317)
Q Consensus 302 nl~ 304 (317)
..+
T Consensus 278 aa~ 280 (288)
T 1b0a_A 278 ACV 280 (288)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 120
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.45 E-value=3.8e-07 Score=80.75 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=74.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEE-EEeCCCCCCCCCccccCCHHHhc-ccCCEEEEeccCChhhhccccHHHHhccC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCII-GYNSRTEKPNLNYKYYPNLIDLA-SNCQILVVACSLTEETQHIVNRQVINALG 226 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V-~~~~~~~~~~~~~~~~~~l~el~-~~aDvV~~~lp~~~~t~~li~~~~l~~mk 226 (317)
++|||||+|.||+.+++.+..-|+++ .++|++.+... .+.++++++ .++|+|++++|..... +-....++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~~---~~~~~~~l~~~~~DvVv~~~~~~~~~-----~~~~~~l~ 72 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHEK---MVRGIDEFLQREMDVAVEAASQQAVK-----DYAEKILK 72 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCTT---EESSHHHHTTSCCSEEEECSCHHHHH-----HHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchhh---hcCCHHHHhcCCCCEEEECCCHHHHH-----HHHHHHHH
Confidence 47999999999999999998889987 68888753211 466899998 7999999999944322 22345678
Q ss_pred CCcEEEEeCCCcccCH---HHHHHHHHhCCce
Q 042102 227 PKGVLINIGRGLLVDE---HELVSALLQGRLG 255 (317)
Q Consensus 227 ~gavlVN~~rg~~vd~---~aL~~al~~g~i~ 255 (317)
.|..+|+.+.+..-+. +.|.++.++....
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 8999999988877666 5677777664443
No 121
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.44 E-value=4.3e-07 Score=82.12 Aligned_cols=77 Identities=17% Similarity=0.323 Sum_probs=66.6
Q ss_pred ccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhc
Q 042102 146 FTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINA 224 (317)
Q Consensus 146 l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~ 224 (317)
+.|+++.|||.|. +|+.+|+.|...|++|+++++. ..++++.+++||+|+.+++. .+++.++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------TKDIGSMTRSSKIVVVAVGR----PGFLNREM--- 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHHHSSEEEECSSC----TTCBCGGG---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------cccHHHhhccCCEEEECCCC----CccccHhh---
Confidence 8999999999986 8999999999999999988753 25789999999999999984 34677765
Q ss_pred cCCCcEEEEeCCCc
Q 042102 225 LGPKGVLINIGRGL 238 (317)
Q Consensus 225 mk~gavlVN~~rg~ 238 (317)
+|+|+++||+|.-.
T Consensus 212 vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 VTPGSVVIDVGINY 225 (276)
T ss_dssp CCTTCEEEECCCEE
T ss_pred ccCCcEEEEeccCc
Confidence 59999999998755
No 122
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.44 E-value=5.6e-07 Score=81.79 Aligned_cols=111 Identities=14% Similarity=0.215 Sum_probs=82.8
Q ss_pred cccccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 143 TTKFTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
+.++.|+++.|||.|. +|+.+|..|...|++|++++++. .++++.+++||+|+.+++. .++|.++.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 221 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------KDLSLYTRQADLIIVAAGC----VNLLRSDM 221 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHTTCSEEEECSSC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhhcCCEEEECCCC----CCcCCHHH
Confidence 3469999999999988 69999999999999999887542 4789999999999999983 45677765
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccH
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATV 289 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~ 289 (317)
+|+|+++||++.-.+-| |++ .-||...+ ..+. --.+||==||...
T Consensus 222 ---vk~GavVIDVgi~~~~~----------gkl---~GDVdf~~------v~~~-a~~iTPVPGGVGp 266 (285)
T 3p2o_A 222 ---VKEGVIVVDVGINRLES----------GKI---VGDVDFEE------VSKK-SSYITPVPGGVGP 266 (285)
T ss_dssp ---SCTTEEEEECCCEECTT----------SCE---ECSBCHHH------HTTT-EEEECCSSSSHHH
T ss_pred ---cCCCeEEEEeccCcccC----------CCE---eccccHHH------HHhh-heEeCCCCCcCcH
Confidence 59999999998765432 554 44663211 1111 2478996666544
No 123
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.44 E-value=5.8e-07 Score=81.48 Aligned_cols=109 Identities=18% Similarity=0.274 Sum_probs=82.3
Q ss_pred cccccCCeEEEEecChh-HHHHHHHHhhC--CCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 143 TTKFTGKSVGILGMGRI-GTAIAKRAEAF--DCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~i-G~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
+.+++|+++.|||.|.+ |+.+|+.|... |++|+++.++. .++.+.+++||+|+.+++ ..++|.+
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------~~L~~~~~~ADIVI~Avg----~p~~I~~ 219 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------RDLPALTRQADIVVAAVG----VAHLLTA 219 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------SCHHHHHTTCSEEEECSC----CTTCBCG
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------hHHHHHHhhCCEEEECCC----CCcccCH
Confidence 34699999999999985 99999999999 89999886543 479999999999999988 3346887
Q ss_pred HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccH
Q 042102 220 QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATV 289 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~ 289 (317)
+. +|+|+++||+|.-.+-| | ..-||- .+ ..+. --.+||-=||...
T Consensus 220 ~~---vk~GavVIDVgi~r~~~----------g----lvGDVd-~~------v~~~-a~~iTPVPGGVGp 264 (281)
T 2c2x_A 220 DM---VRPGAAVIDVGVSRTDD----------G----LVGDVH-PD------VWEL-AGHVSPNPGGVGP 264 (281)
T ss_dssp GG---SCTTCEEEECCEEEETT----------E----EEESBC-GG------GGGT-CSEEECSSSSSHH
T ss_pred HH---cCCCcEEEEccCCCCCC----------C----ccCccc-cc------hhhh-eeeecCCCCCccH
Confidence 76 48999999999765433 3 456775 21 1111 2357887666654
No 124
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.43 E-value=5.8e-07 Score=81.71 Aligned_cols=79 Identities=16% Similarity=0.278 Sum_probs=67.5
Q ss_pred ccccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 144 TKFTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
.++.|+++.|||.|. +|+.+|..|...|++|.+..++ ..++++.+++||+|+.+++. .++|.++.
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~- 222 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---------TTDLKSHTTKADILIVAVGK----PNFITADM- 222 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGGG-
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---------chhHHHhcccCCEEEECCCC----CCCCCHHH-
Confidence 469999999999998 6999999999999999988653 24789999999999999983 45677765
Q ss_pred hccCCCcEEEEeCCCc
Q 042102 223 NALGPKGVLINIGRGL 238 (317)
Q Consensus 223 ~~mk~gavlVN~~rg~ 238 (317)
+|+|+++||++.-.
T Consensus 223 --vk~GavVIDvgi~~ 236 (285)
T 3l07_A 223 --VKEGAVVIDVGINH 236 (285)
T ss_dssp --SCTTCEEEECCCEE
T ss_pred --cCCCcEEEEecccC
Confidence 59999999998755
No 125
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.42 E-value=4.5e-07 Score=82.99 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=68.0
Q ss_pred ccccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHH--HhcccCCEEEEeccCChhhhccccHH
Q 042102 144 TKFTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLI--DLASNCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~--el~~~aDvV~~~lp~~~~t~~li~~~ 220 (317)
.++.|+++.|||.|. +|+.+|..|...|++|+++++.. .+++ +.+++||+|+.+++. .++|.++
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T---------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~ 227 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT---------STEDMIDYLRTADIVIAAMGQ----PGYVKGE 227 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS---------CHHHHHHHHHTCSEEEECSCC----TTCBCGG
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCchhhhhhccCCEEEECCCC----CCCCcHH
Confidence 468999999999988 79999999999999999987632 2566 999999999999994 3567776
Q ss_pred HHhccCCCcEEEEeCCCccc
Q 042102 221 VINALGPKGVLINIGRGLLV 240 (317)
Q Consensus 221 ~l~~mk~gavlVN~~rg~~v 240 (317)
. +|+|+++||++.-.+-
T Consensus 228 ~---vk~GavVIDvgi~~~~ 244 (300)
T 4a26_A 228 W---IKEGAAVVDVGTTPVP 244 (300)
T ss_dssp G---SCTTCEEEECCCEEES
T ss_pred h---cCCCcEEEEEeccCCc
Confidence 5 5999999999875543
No 126
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.42 E-value=7.8e-07 Score=80.85 Aligned_cols=81 Identities=19% Similarity=0.307 Sum_probs=68.3
Q ss_pred cccccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 143 TTKFTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
+.++.|+++.|||.|. +|+.+|..|...|++|+++.+.. .++++.+++||+|+.+++. .++|.++.
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 222 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------RDLADHVSRADLVVVAAGK----PGLVKGEW 222 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHHTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------cCHHHHhccCCEEEECCCC----CCCCCHHH
Confidence 3468999999999987 79999999999999999886532 3789999999999999983 45677765
Q ss_pred HhccCCCcEEEEeCCCcc
Q 042102 222 INALGPKGVLINIGRGLL 239 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~ 239 (317)
+|+|+++||++.-.+
T Consensus 223 ---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 223 ---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp ---SCTTCEEEECCSCSS
T ss_pred ---cCCCeEEEEeccccc
Confidence 499999999987654
No 127
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.42 E-value=6e-07 Score=87.94 Aligned_cols=102 Identities=7% Similarity=0.117 Sum_probs=74.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC--CCEEEEeCCCCCCC------------CC------------ccccCCHHHhcccCCE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF--DCIIGYNSRTEKPN------------LN------------YKYYPNLIDLASNCQI 202 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~------------~~------------~~~~~~l~el~~~aDv 202 (317)
++|+|||+|.||..+|..|... |.+|.++|++++.. .+ .....++.+.++.||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 78999999864321 00 1223466788899999
Q ss_pred EEEeccCChh--------------hhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 203 LVVACSLTEE--------------TQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 203 V~~~lp~~~~--------------t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
|++|+|.... +...+ +...+.+++|.++|+.|.-.+-..+.+.+.+++
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999886432 22222 445667999999999886555555667777776
No 128
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.42 E-value=8.9e-07 Score=78.44 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=57.7
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGP 227 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ 227 (317)
.++|||||+|.||.++|+.|+..|.+|.+|++. ++ ++.|| ++++|.. .+..++ ++....+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l~~ 67 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAFARR 67 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTTCCT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHhcCC
Confidence 368999999999999999999999999999872 22 57899 8889976 555555 455667899
Q ss_pred CcEEEEeC
Q 042102 228 KGVLINIG 235 (317)
Q Consensus 228 gavlVN~~ 235 (317)
|+++|+++
T Consensus 68 g~ivvd~s 75 (232)
T 3dfu_A 68 GQMFLHTS 75 (232)
T ss_dssp TCEEEECC
T ss_pred CCEEEEEC
Confidence 99999975
No 129
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.41 E-value=8.7e-07 Score=81.09 Aligned_cols=135 Identities=16% Similarity=0.190 Sum_probs=90.3
Q ss_pred cccccCCeEEEEecCh-hHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 143 TTKFTGKSVGILGMGR-IGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
+.+++|+++.|||.|. +|+.+|+.|...|++|+++++. ..++.+.+++||+|+.+++. .++|.++.
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 226 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------TAHLDEEVNKGDILVVATGQ----PEMVKGEW 226 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------cccHHHHhccCCEEEECCCC----cccCCHHH
Confidence 3469999999999996 6999999999999999988643 24799999999999999885 34688776
Q ss_pred HhccCCCcEEEEeCCCcccCHHHHHHHHHhC-CceEEEeeCCCCCCCCCcccCCCCceEEcccCCCccHHHHHHHHHHHH
Q 042102 222 INALGPKGVLINIGRGLLVDEHELVSALLQG-RLGGAGLDVFEHEPDVPEELIGLENVVLLPHVASATVETRKAMADLVV 300 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~~vd~~aL~~al~~g-~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a~~t~~~~~~~~~~~~ 300 (317)
+|+|+++||+|.-.+-|.. -.+| ++. =||-.. ...+. --.+||-=||...-...-+.+.++
T Consensus 227 ---vk~GavVIDVgi~~~~d~~-----~~~g~klv---GDVdf~------~v~~~-a~~iTPVPGGVGpmTiamLl~Ntv 288 (301)
T 1a4i_A 227 ---IKPGAIVIDCGINYVPDDK-----KPNGRKVV---GDVAYD------EAKER-ASFITPVPGGVGPMTVAMLMQSTV 288 (301)
T ss_dssp ---SCTTCEEEECCCBC---------------CCB---CSBCHH------HHTTT-CSEECCSSSSHHHHHHHHHHHHHH
T ss_pred ---cCCCcEEEEccCCCccccc-----ccCCCeee---ccccHH------Hhhhh-ceEeCCCCCCccHHHHHHHHHHHH
Confidence 4899999999986643321 1233 443 365321 11111 236899777766544444444444
Q ss_pred HHHHHHHC
Q 042102 301 GNLQAHFG 308 (317)
Q Consensus 301 ~nl~~~~~ 308 (317)
+..++++.
T Consensus 289 ~aa~~~~~ 296 (301)
T 1a4i_A 289 ESAKRFLE 296 (301)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 44444443
No 130
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.38 E-value=1.1e-06 Score=83.98 Aligned_cols=101 Identities=9% Similarity=0.076 Sum_probs=74.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CC------------------ccccCCHHHhcccCCEEEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LN------------------YKYYPNLIDLASNCQILVV 205 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~------------------~~~~~~l~el~~~aDvV~~ 205 (317)
++|+|||+|.||..+|..|.. |.+|.++|+++... .+ .....++.+.++.||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 99999999875321 11 1223467788899999999
Q ss_pred eccCCh----------hhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 206 ACSLTE----------ETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 206 ~lp~~~----------~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
++|... .+...+ +...+ +++|+++|+.+.-.+-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999763 234333 34455 8999999997776665566777766554
No 131
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.38 E-value=6.7e-07 Score=91.63 Aligned_cols=135 Identities=17% Similarity=0.121 Sum_probs=87.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC----------------C-------------ccccCCHHHhccc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL----------------N-------------YKYYPNLIDLASN 199 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~-------------~~~~~~l~el~~~ 199 (317)
++|||||+|.||..+|..+...|++|+++|+++.... + .....++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 5799999999999999999999999999998754211 1 0112345 67899
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceE
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVV 279 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi 279 (317)
||+|+.++|.+.+...-+-++..+.++++++++..+.+ +....+.+.+. ..-...++..|. |. ...+.+.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~-~~~~~ig~hf~~--P~-----~~~~lve 463 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALK-RPENFVGMHFFN--PV-----HMMPLVE 463 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCS-CGGGEEEEECCS--ST-----TTCCEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhc-CccceEEEEccC--Cc-----ccCceEE
Confidence 99999999988776554445566778999999754433 33345555442 222234556554 22 2344566
Q ss_pred EcccCCCccHHHHHHH
Q 042102 280 LLPHVASATVETRKAM 295 (317)
Q Consensus 280 ~tPH~a~~t~~~~~~~ 295 (317)
+.|+-. .+.+..+.+
T Consensus 464 vv~g~~-t~~e~~~~~ 478 (715)
T 1wdk_A 464 VIRGEK-SSDLAVATT 478 (715)
T ss_dssp EEECSS-CCHHHHHHH
T ss_pred EEECCC-CCHHHHHHH
Confidence 666422 244444443
No 132
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.38 E-value=5.1e-07 Score=83.64 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=69.1
Q ss_pred ccccccCCeEEEEecChh-HHHHHHHHhhCCCEEEEeCCCCCC------CCC--cc-c-----c--CCHHHhcccCCEEE
Q 042102 142 MTTKFTGKSVGILGMGRI-GTAIAKRAEAFDCIIGYNSRTEKP------NLN--YK-Y-----Y--PNLIDLASNCQILV 204 (317)
Q Consensus 142 ~~~~l~g~~vgIiG~G~i-G~~~a~~l~~~G~~V~~~~~~~~~------~~~--~~-~-----~--~~l~el~~~aDvV~ 204 (317)
++.++.|+++.|||.|.| |+.+|+.|.+.|++|.+++|+... ... .. . . .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 455799999999999975 999999999999999999886211 000 11 1 1 46889999999999
Q ss_pred EeccCChhhhcc-ccHHHHhccCCCcEEEEeCCC
Q 042102 205 VACSLTEETQHI-VNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 205 ~~lp~~~~t~~l-i~~~~l~~mk~gavlVN~~rg 237 (317)
.+++. .++ |.++. +|+|+++||+|..
T Consensus 251 sAtg~----p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPS----ENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCC----TTCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCC----CcceeCHHH---cCCCeEEEEcCCC
Confidence 99884 234 77766 4899999999864
No 133
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.37 E-value=1.8e-07 Score=81.00 Aligned_cols=112 Identities=19% Similarity=0.190 Sum_probs=79.0
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCC------C------ccccCCHHHhcccCCEEEEeccCChhhhc
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------N------YKYYPNLIDLASNCQILVVACSLTEETQH 215 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~------~~~~~~l~el~~~aDvV~~~lp~~~~t~~ 215 (317)
++|+|+| .|.||+.+++.|...|++|.+++|+++... + .....+++++++++|+|++++|. ..+..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~-~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW-EHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh-hhHHH
Confidence 4799999 999999999999999999999998753210 1 01124677889999999999993 33444
Q ss_pred cccHHHHhccCCCcEEEEeCCCcccC------------HHHHHHHHHhCCceEEEeeCCCCCCC
Q 042102 216 IVNRQVINALGPKGVLINIGRGLLVD------------EHELVSALLQGRLGGAGLDVFEHEPD 267 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~vd------------~~aL~~al~~g~i~ga~lDV~~~EP~ 267 (317)
++. +..+.++ +.++|+++.|--.+ .+.+.+.+.. . ..++++.+.|.
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~--~~v~~~~~~~~ 137 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--E--KVVSALHTIPA 137 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--S--CEEECCTTCCH
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--C--eEEEEccchHH
Confidence 442 3334454 89999999876532 4667666653 2 35677777663
No 134
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.36 E-value=5.5e-07 Score=83.98 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=73.3
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----C-Cc--------------cccCCHHHhcccCCEEEEecc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----L-NY--------------KYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~-~~--------------~~~~~l~el~~~aDvV~~~lp 208 (317)
++|+|||+|.||+.+|..|...|.+|.++++++... . +. ....+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 689999999999999999999999999999874321 0 10 134578888899999999999
Q ss_pred CChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 209 LTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
.... ..++ +...+.+++++++|++ .|.......+.+.+.+
T Consensus 85 ~~~~-~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIHH-ASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGGH-HHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chHH-HHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 6654 4444 4556678999999998 4422334445555554
No 135
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.35 E-value=4e-07 Score=79.78 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=61.5
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEE-eCCCCCCCC------CccccCCHHHhcccCCEEEEeccCChhhhccccHH
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGY-NSRTEKPNL------NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~~~~~~------~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~ 220 (317)
-++|||||+|.||+.+|+.|...|.+|.+ ++|+++... +.....+..+.++++|+|++++|.. ....++.+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HHHHHHHH-
Confidence 36899999999999999999999999988 998765431 2222234556689999999999832 22322221
Q ss_pred HHhccCCCcEEEEeCCCc
Q 042102 221 VINALGPKGVLINIGRGL 238 (317)
Q Consensus 221 ~l~~mk~gavlVN~~rg~ 238 (317)
+.. .++.++|+++-|-
T Consensus 101 -l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp -CSC-CTTCEEEECCCCB
T ss_pred -hhc-cCCCEEEEcCCCC
Confidence 112 3588999998654
No 136
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.35 E-value=6.3e-07 Score=83.71 Aligned_cols=90 Identities=23% Similarity=0.240 Sum_probs=68.2
Q ss_pred CCeEEEEecChhHHHHHHHHhhCC-------CEEEEeCCCCC-----CCC-------------------CccccCCHHHh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFD-------CIIGYNSRTEK-----PNL-------------------NYKYYPNLIDL 196 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~el 196 (317)
.++|+|||+|.||..+|..|...| .+|.+|++++. ... ......+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 358999999999999999998888 89999998765 110 01123567888
Q ss_pred cccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcc
Q 042102 197 ASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLL 239 (317)
Q Consensus 197 ~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~ 239 (317)
++.||+|++++|. ..+..++ ++....+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 8999999999995 3444444 344456788999999988754
No 137
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.35 E-value=8e-07 Score=80.91 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=74.9
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCCCcc------ccCCHHHhcccCCEEEEeccCC--hhhhc
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNLNYK------YYPNLIDLASNCQILVVACSLT--EETQH 215 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~------~~~~l~el~~~aDvV~~~lp~~--~~t~~ 215 (317)
++.|+++.|+|.|.+|++++..|...|+ +|.+++|+..+..... ...++.++++++|+|+.++|.. +....
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 4789999999999999999999999999 8999999875432111 1234667788999999999964 22222
Q ss_pred cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 216 IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+. .+.++++.+++|+...+. .+ .|+++.++..+.
T Consensus 194 ~l~---~~~l~~~~~V~D~vY~P~-~T-~ll~~A~~~G~~ 228 (277)
T 3don_A 194 VIS---LNRLASHTLVSDIVYNPY-KT-PILIEAEQRGNP 228 (277)
T ss_dssp SSC---CTTCCSSCEEEESCCSSS-SC-HHHHHHHHTTCC
T ss_pred CCC---HHHcCCCCEEEEecCCCC-CC-HHHHHHHHCcCE
Confidence 232 356789999999987643 34 465555555444
No 138
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.34 E-value=1.3e-06 Score=85.17 Aligned_cols=111 Identities=17% Similarity=0.149 Sum_probs=74.8
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCC---------------------------ccccCCHHHhcccC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLN---------------------------YKYYPNLIDLASNC 200 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~---------------------------~~~~~~l~el~~~a 200 (317)
-++|||||+|.||..+|..+...|++|.++|+++..... .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 358999999999999999999999999999987532100 0112455 568899
Q ss_pred CEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCC
Q 042102 201 QILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVF 262 (317)
Q Consensus 201 DvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~ 262 (317)
|+|+.++|.+.+...-+-++..+.+++++++++... + +....+.+.+.. .-...+...|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs-~-~~~~~la~~~~~-~~~~ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS-A-LNVDDIASSTDR-PQLVIGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS-S-SCHHHHHTTSSC-GGGEEEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCC-C-cCHHHHHHHhcC-CcceEEeecC
Confidence 999999997655443333455567899999987333 3 233466655532 2223455555
No 139
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.33 E-value=1.1e-06 Score=86.09 Aligned_cols=102 Identities=8% Similarity=0.079 Sum_probs=73.0
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------------CC-------------ccccCCHHHhcccCCE
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------------LN-------------YKYYPNLIDLASNCQI 202 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------------~~-------------~~~~~~l~el~~~aDv 202 (317)
.++|+|||+|.||..+|..|...|.+|++||++++.. .+ .....++++.++.||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 3699999999999999999999999999999864321 11 1233567788899999
Q ss_pred EEEeccCC---------hhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHH
Q 042102 203 LVVACSLT---------EETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALL 250 (317)
Q Consensus 203 V~~~lp~~---------~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~ 250 (317)
|++|+|.. ..++..+ +...+.+++|+++|+.+.-.+=..+.+.+.+.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999863 3344333 44556789999999998433333344444444
No 140
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.33 E-value=6.2e-07 Score=80.98 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=65.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------Cc----cccCCHHHhcccCCEEEEeccCChhhhcc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------NY----KYYPNLIDLASNCQILVVACSLTEETQHI 216 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------~~----~~~~~l~el~~~aDvV~~~lp~~~~t~~l 216 (317)
++|+|||+|.||..+|..|...|.+|.+++|++.... +. ....+..+.++.+|+|++++|... +..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~-~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ-VSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG-HHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHh-HHHH
Confidence 4799999999999999999999999999998765321 10 001122467789999999999764 4544
Q ss_pred ccHHHHhccCCCcEEEEeCCCc
Q 042102 217 VNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 217 i~~~~l~~mk~gavlVN~~rg~ 238 (317)
+ ++..+.+++++++|++..|-
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSSS
T ss_pred H-HHHHhhCCCCCEEEEecCCC
Confidence 4 34556788899999986653
No 141
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.33 E-value=1.2e-06 Score=85.68 Aligned_cols=98 Identities=17% Similarity=0.155 Sum_probs=72.9
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CC-EEEEeCCCCC----CC----C----------------------C-ccccCCHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DC-IIGYNSRTEK----PN----L----------------------N-YKYYPNLID 195 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~-~V~~~~~~~~----~~----~----------------------~-~~~~~~l~e 195 (317)
++|+|||+|.+|..+|..|... |. +|++||+++. .. . + .....+ .+
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~e 97 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-FS 97 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-HH
Confidence 5899999999999999999999 99 9999998876 21 0 0 011234 57
Q ss_pred hcccCCEEEEeccCCh--------hhhccc--cHHHHhccCCCcEEEEeCCCcccCHHHHHH
Q 042102 196 LASNCQILVVACSLTE--------ETQHIV--NRQVINALGPKGVLINIGRGLLVDEHELVS 247 (317)
Q Consensus 196 l~~~aDvV~~~lp~~~--------~t~~li--~~~~l~~mk~gavlVN~~rg~~vd~~aL~~ 247 (317)
.+++||+|++++|... ++..+. .+...+.+++|.++|+.|.-++--.+.+.+
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 7899999999999653 222222 245667899999999999766655555654
No 142
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.30 E-value=4.9e-07 Score=85.45 Aligned_cols=88 Identities=16% Similarity=0.220 Sum_probs=66.6
Q ss_pred CeEEEEecChhHHHHHHHHhhCC-------CEEEEeCCCCC-----CCC-------------------CccccCCHHHhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD-------CIIGYNSRTEK-----PNL-------------------NYKYYPNLIDLA 197 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~el~ 197 (317)
++|+|||.|.||..+|..|...| .+|.+|++++. ... +.....++.+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998778 89999998765 110 112235677888
Q ss_pred ccCCEEEEeccCChhhhccccHHHHh----ccCCCcEEEEeCCCc
Q 042102 198 SNCQILVVACSLTEETQHIVNRQVIN----ALGPKGVLINIGRGL 238 (317)
Q Consensus 198 ~~aDvV~~~lp~~~~t~~li~~~~l~----~mk~gavlVN~~rg~ 238 (317)
+.||+|++++|. ..++.++. +... .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~~-~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVLA-SIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHHH-HHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCCH-HHHHHHHH-HHhhhhhccCCCCCEEEEeCCcc
Confidence 999999999994 45555442 3344 678899999998773
No 143
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.29 E-value=6.5e-07 Score=82.72 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=71.5
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCC--CCCCC-----CCc-----------cccC--CHHHhcccCCEEEEecc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSR--TEKPN-----LNY-----------KYYP--NLIDLASNCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~--~~~~~-----~~~-----------~~~~--~l~el~~~aDvV~~~lp 208 (317)
++|+|||+|.||+.+|..|...|.+|.++++ ++... .+. .... ++.+.++.+|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988999999998 54321 110 1233 67788899999999999
Q ss_pred CChhhhccccHHHHhccCCCcEEEEeCCCc---cc-CHHHHHHHHHh
Q 042102 209 LTEETQHIVNRQVINALGPKGVLINIGRGL---LV-DEHELVSALLQ 251 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~gavlVN~~rg~---~v-d~~aL~~al~~ 251 (317)
.. .+..++ +.... ++++.++|+++.|- -. ..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 65 444444 34455 78899999998775 11 22345555544
No 144
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.27 E-value=1.7e-06 Score=83.54 Aligned_cols=104 Identities=11% Similarity=0.137 Sum_probs=73.3
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CC--ccccCCHHHh---------------cccCCEEE
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LN--YKYYPNLIDL---------------ASNCQILV 204 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~--~~~~~~l~el---------------~~~aDvV~ 204 (317)
-+|.++.|||+|.+|..+|..|...|++|++||+++++. .+ ......++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 468899999999999999999999999999999876431 11 1112233332 45799999
Q ss_pred EeccCChhhh--------ccc--cHHHHhccCCCcEEEEeCCCcccCHHHHHHHH
Q 042102 205 VACSLTEETQ--------HIV--NRQVINALGPKGVLINIGRGLLVDEHELVSAL 249 (317)
Q Consensus 205 ~~lp~~~~t~--------~li--~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al 249 (317)
+|+|...... .+. .+...+.|++|.++|+.|.-++--.+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 9999655221 222 24566779999999999977766666776654
No 145
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.27 E-value=8.7e-07 Score=83.52 Aligned_cols=92 Identities=17% Similarity=0.149 Sum_probs=71.1
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-------------CC------ccccCCHHHhcccCCEEEEecc
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-------------LN------YKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-------------~~------~~~~~~l~el~~~aDvV~~~lp 208 (317)
.++|+|||.|.+|..+|..|...|.+|.+|+++++.. .+ .....++++.++.||+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 4689999999999999999999999999999874321 00 1224678899999999999999
Q ss_pred CChhhhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 209 LTEETQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
.. .++.++ ++....+++++++|++..|-..+
T Consensus 109 ~~-~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 109 SF-AFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp HH-HHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 43 444444 45556788999999998876554
No 146
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.26 E-value=2.1e-07 Score=87.56 Aligned_cols=90 Identities=12% Similarity=0.117 Sum_probs=67.8
Q ss_pred eEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----C--------------CccccCCHHHhcccCCEEEEeccCC
Q 042102 150 SVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----L--------------NYKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 150 ~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~--------------~~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
+|+|||+|.||..+|..|...|.+|.+|++++... . ......++.++++.+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 89999999999999999999999999999875321 0 112235788889999999999994
Q ss_pred hhhhccccHH---HHhccCC-CcEEEEeCCCccc
Q 042102 211 EETQHIVNRQ---VINALGP-KGVLINIGRGLLV 240 (317)
Q Consensus 211 ~~t~~li~~~---~l~~mk~-gavlVN~~rg~~v 240 (317)
..+..++... ....+++ ++++|+++.|-..
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 4555555321 4455778 9999999876433
No 147
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.26 E-value=1.7e-06 Score=88.82 Aligned_cols=135 Identities=13% Similarity=0.080 Sum_probs=85.7
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----------------CC-------------ccccCCHHHhccc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----------------LN-------------YKYYPNLIDLASN 199 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~-------------~~~~~~l~el~~~ 199 (317)
++|||||.|.||..+|..+...|++|.++|+++... .+ .....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 579999999999999999999999999999875321 01 0122345 57899
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceE
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVV 279 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi 279 (317)
||+|+.++|.+.+...-+-++..+.++++++++..+.+ +....+.+.+.. .-...++..|. |. ..+|.+.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~--P~-----~~~~lve 461 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFS--PA-----HIMPLLE 461 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECS--ST-----TTCCEEE
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCC--Cc-----ccCceEE
Confidence 99999999988765544445566778999998654333 333445544422 11224555554 22 2345566
Q ss_pred EcccCCCccHHHHHHH
Q 042102 280 LLPHVASATVETRKAM 295 (317)
Q Consensus 280 ~tPH~a~~t~~~~~~~ 295 (317)
+.|+-. .+.+..+++
T Consensus 462 vv~g~~-t~~e~~~~~ 476 (725)
T 2wtb_A 462 IVRTNH-TSAQVIVDL 476 (725)
T ss_dssp EEECSS-CCHHHHHHH
T ss_pred EEECCC-CCHHHHHHH
Confidence 666422 244444443
No 148
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.24 E-value=6.7e-07 Score=81.64 Aligned_cols=104 Identities=9% Similarity=0.074 Sum_probs=71.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc------------cCCHHHhcc---cCCEEEEecc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY------------YPNLIDLAS---NCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~------------~~~l~el~~---~aDvV~~~lp 208 (317)
++|+|||+|.||+.+|..|...|.+|.++++++... .+... ..+..++.+ .+|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 589999999999999999999999999999865321 01100 013334444 8999999999
Q ss_pred CChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 209 LTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.. .+..++ +...+.+++++++|+++.|- -..+.+.+.+.+.++.
T Consensus 84 ~~-~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 AQ-QLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp HH-HHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred cc-cHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 43 445444 34556688999999997653 2345566666554443
No 149
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.24 E-value=1.7e-06 Score=79.54 Aligned_cols=106 Identities=13% Similarity=0.141 Sum_probs=75.5
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC------Cc---cc--cCCHHHhcccCCEEEEeccCChh
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL------NY---KY--YPNLIDLASNCQILVVACSLTEE 212 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~------~~---~~--~~~l~el~~~aDvV~~~lp~~~~ 212 (317)
.+.|++++|+|.|.+|+.++..|...|+ +|.+++|+..+.. +. .. ..++.+.+.++|+|+.++|....
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCC
Confidence 4778999999999999999999999998 9999999854321 11 11 12466778999999999997542
Q ss_pred h--hc-cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 213 T--QH-IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 213 t--~~-li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
. .. .+. .+.++++.+++|++-. .... .|.+..++..+.
T Consensus 218 ~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T-~ll~~A~~~G~~ 258 (297)
T 2egg_A 218 PRVEVQPLS---LERLRPGVIVSDIIYN-PLET-KWLKEAKARGAR 258 (297)
T ss_dssp SCCSCCSSC---CTTCCTTCEEEECCCS-SSSC-HHHHHHHHTTCE
T ss_pred CCCCCCCCC---HHHcCCCCEEEEcCCC-CCCC-HHHHHHHHCcCE
Confidence 1 11 133 2457899999999885 3334 366666665554
No 150
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.21 E-value=1.9e-06 Score=77.36 Aligned_cols=99 Identities=17% Similarity=0.089 Sum_probs=73.7
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCCC----c--cccCCHHHhcccCCEEEEeccCC--hhhhcc
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNLN----Y--KYYPNLIDLASNCQILVVACSLT--EETQHI 216 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~----~--~~~~~l~el~~~aDvV~~~lp~~--~~t~~l 216 (317)
+.| +++|+|.|.+|++++..|...|+ +|.+++|+.++... . ....++.+.++++|+|++++|.. ++ ...
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~~~ 184 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-ELP 184 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-CCS
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-CCC
Confidence 578 99999999999999999999999 89999998653211 1 12456778899999999999864 22 123
Q ss_pred ccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 217 VNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 217 i~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
+..+. ++++.+++++.-+ ..+-+.++.+.|
T Consensus 185 i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 185 VSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 44433 5789999999888 455555666555
No 151
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.21 E-value=9.4e-07 Score=82.18 Aligned_cols=83 Identities=18% Similarity=0.215 Sum_probs=63.5
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CC-----------ccccCCHHHhcccCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LN-----------YKYYPNLIDLASNCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~-----------~~~~~~l~el~~~aDvV~~~lp~~~~ 212 (317)
.+|+|||+|.||..+|..|...|.+|.+|+|++... .+ .....++.+ ++.+|+|++++|. ..
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~~ 92 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-QY 92 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-GG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-HH
Confidence 589999999999999999999999999999874321 11 233456778 8899999999994 55
Q ss_pred hhccccHHHHhccC-CCcEEEEeCCCc
Q 042102 213 TQHIVNRQVINALG-PKGVLINIGRGL 238 (317)
Q Consensus 213 t~~li~~~~l~~mk-~gavlVN~~rg~ 238 (317)
++.++ ..++ ++.++|+++.|-
T Consensus 93 ~~~v~-----~~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 93 IREHL-----LRLPVKPSMVLNLSKGI 114 (335)
T ss_dssp HHHHH-----TTCSSCCSEEEECCCCC
T ss_pred HHHHH-----HHhCcCCCEEEEEeCCC
Confidence 55443 3344 789999998763
No 152
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.11 E-value=2.8e-06 Score=76.91 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=71.7
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCcc----ccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYK----YYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
|+++.|+|.|.+|++++..|...|.+|.+++|+.++..... ...+++++ +++|+|+.++|..-.....+..+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 78999999999999999999999999999999876531110 01122333 38999999999753322245555333
Q ss_pred -ccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 224 -ALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 224 -~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.++++.+++|+...+ ... |+++.++..+.
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~~ 226 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTP-FLSLAKELKTP 226 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCH-HHHHHHHTTCC
T ss_pred hhCCCCCEEEEeCCCC--chH-HHHHHHHCcCE
Confidence 577889999998875 444 55544444443
No 153
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.09 E-value=2.8e-06 Score=80.69 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=69.6
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCC---EEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDC---IIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~---~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
...+|.|||. |.+|+..++.++++|+ .|.++|++.... +.. + +.++++|+|+.++......-.+|.++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~-g~~----~-~~i~~aDivIn~vlig~~aP~Lvt~e~v 286 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR-GGP----F-DEIPQADIFINCIYLSKPIAPFTNMEKL 286 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT-CSC----C-THHHHSSEEEECCCCCSSCCCSCCHHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc-CCc----h-hhHhhCCEEEECcCcCCCCCcccCHHHH
Confidence 4668999999 9999999999999998 899999765221 111 1 3466999999999987767789999999
Q ss_pred hcc-CCCcEEEEeC
Q 042102 223 NAL-GPKGVLINIG 235 (317)
Q Consensus 223 ~~m-k~gavlVN~~ 235 (317)
+.| |||+++||++
T Consensus 287 ~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 287 NNPNRRLRTVVDVS 300 (394)
T ss_dssp CCTTCCCCEEEETT
T ss_pred hcCcCCCeEEEEEe
Confidence 999 9999999996
No 154
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.05 E-value=1.5e-05 Score=64.98 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=75.2
Q ss_pred cCCeEEEEec----ChhHHHHHHHHhhCCCEEEEeCCC--CCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHH
Q 042102 147 TGKSVGILGM----GRIGTAIAKRAEAFDCIIGYNSRT--EKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 147 ~g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~--~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~ 220 (317)
+-++|+|||. |.+|..+++.++..|++|+..++. .....+...+.+++|+-...|++++++|. +....++. +
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~-~ 89 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP-E 89 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH-H
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH-H
Confidence 4679999999 899999999999999997777665 33334555677899998899999999997 55666663 3
Q ss_pred HHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 221 VINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 221 ~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
..+ ...++++++.+.. ++.+.+..++..++
T Consensus 90 ~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 90 VLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp HHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred HHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 333 3345666654332 57788888887776
No 155
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.01 E-value=1.8e-05 Score=74.81 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=74.3
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCC----CCCC---C------------CccccCCHHHhcccCCE
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRT----EKPN---L------------NYKYYPNLIDLASNCQI 202 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~----~~~~---~------------~~~~~~~l~el~~~aDv 202 (317)
+..+.+.+|.|+|.|.+|..+|+.|.+.|. +|+.+|++ .... . ......+|.|.++++|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 346888999999999999999999999999 79999987 3221 0 01123569999999999
Q ss_pred EEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcc
Q 042102 203 LVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLL 239 (317)
Q Consensus 203 V~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~ 239 (317)
++-+.. .++|.++.++.|+++++++.+|+...
T Consensus 267 lIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 267 FIGVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 887732 38999999999999999999997543
No 156
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.00 E-value=2.6e-05 Score=63.84 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=75.7
Q ss_pred ccc-CCeEEEEec----ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 145 KFT-GKSVGILGM----GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 145 ~l~-g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
-+. .++|+|||. |.+|..+++.|+..|++|+..++......+...+.+++++....|++++++|. +....++.
T Consensus 18 ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~- 95 (144)
T 2d59_A 18 ILTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE- 95 (144)
T ss_dssp HHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-
T ss_pred HHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-
Confidence 354 689999999 79999999999999999777776543334555677899998899999999996 44555553
Q ss_pred HHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 220 QVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+..+ ...++++++. |. .++.+.+.+++..+.
T Consensus 96 ~~~~-~gi~~i~~~~--g~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 96 QAIK-KGAKVVWFQY--NT--YNREASKKADEAGLI 126 (144)
T ss_dssp HHHH-HTCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred HHHH-cCCCEEEECC--Cc--hHHHHHHHHHHcCCE
Confidence 3333 3344666553 32 367888888887776
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.97 E-value=2.4e-05 Score=64.28 Aligned_cols=95 Identities=15% Similarity=0.057 Sum_probs=61.8
Q ss_pred ccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccc----cCC---HHHh-cccCCEEEEec
Q 042102 142 MTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKY----YPN---LIDL-ASNCQILVVAC 207 (317)
Q Consensus 142 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~----~~~---l~el-~~~aDvV~~~l 207 (317)
++....+++|.|+|+|.+|+.+++.|+..|.+|.++++++... .+... ..+ +.+. +..+|+|++++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 4556788999999999999999999999999999998865432 11111 112 3333 67899999999
Q ss_pred cCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 208 SLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 208 p~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
|....+.. -....+.+.+...+|-..++.
T Consensus 93 ~~~~~~~~--~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 93 NDDSTNFF--ISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SCHHHHHH--HHHHHHHTSCCSEEEEECSSG
T ss_pred CCcHHHHH--HHHHHHHHCCCCeEEEEECCH
Confidence 86543332 223444445556666665554
No 158
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.96 E-value=1.2e-06 Score=79.36 Aligned_cols=82 Identities=16% Similarity=0.047 Sum_probs=54.7
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEE-EEeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCII-GYNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V-~~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
++|||||+|.||+.+++.|... ++| .++++++... .+. ...++++++++||+|++++|... . .+.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~-----~~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-I-----KTV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-H-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-H-----HHH
Confidence 4799999999999999999877 888 5888875431 122 34567788889999999999654 2 233
Q ss_pred Hhcc-CCCcEEEEeCCCc
Q 042102 222 INAL-GPKGVLINIGRGL 238 (317)
Q Consensus 222 l~~m-k~gavlVN~~rg~ 238 (317)
+..+ +++.++||++-+-
T Consensus 75 ~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp HTTTCCSSCCEEECCSSS
T ss_pred HHHhccCCCEEEECCCCC
Confidence 3334 6889999998553
No 159
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.95 E-value=3.4e-05 Score=71.33 Aligned_cols=83 Identities=22% Similarity=0.266 Sum_probs=64.5
Q ss_pred cCCeEEEEecChhHHHHHHHHhh-CCC-EEEEeCCCCCCCC---------Cc--cccCCHHHhcccCCEEEEeccCChhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEA-FDC-IIGYNSRTEKPNL---------NY--KYYPNLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~-~G~-~V~~~~~~~~~~~---------~~--~~~~~l~el~~~aDvV~~~lp~~~~t 213 (317)
..++++|||.|.+|+.+++.+.. ++. +|.+|+|+ +... +. ... ++++++++||+|++|+|..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~--- 194 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST--- 194 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---
Confidence 35799999999999999999875 454 79999998 4310 11 224 8999999999999999864
Q ss_pred hccccHHHHhccCCCcEEEEeCCC
Q 042102 214 QHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~rg 237 (317)
..++.. +.+|+|+.++++|..
T Consensus 195 ~pvl~~---~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 195 TPLFAG---QALRAGAFVGAIGSS 215 (313)
T ss_dssp SCSSCG---GGCCTTCEEEECCCS
T ss_pred CcccCH---HHcCCCcEEEECCCC
Confidence 345654 357999999999864
No 160
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.94 E-value=3.9e-06 Score=70.86 Aligned_cols=90 Identities=20% Similarity=0.177 Sum_probs=63.6
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhC-CCEEEEeCCCCCCC-----CCccc----cCC---HHHh--cccCCEEEEecc
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAF-DCIIGYNSRTEKPN-----LNYKY----YPN---LIDL--ASNCQILVVACS 208 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~-----~~~~~----~~~---l~el--~~~aDvV~~~lp 208 (317)
.++.+++|+|+|+|.+|+.+++.|+.. |++|.++++++... .+... ..+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 457788999999999999999999998 99999999875431 12211 122 3444 678999999999
Q ss_pred CChhhhccccHHHHhccCCCcEEEEeC
Q 042102 209 LTEETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
..+.+..++ ..++.+.++..+|...
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEE
Confidence 766554433 3455666666666543
No 161
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.92 E-value=6.6e-06 Score=78.69 Aligned_cols=91 Identities=19% Similarity=0.254 Sum_probs=70.1
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCC---C--C------CCCccccCCHHHhcccCCEEEEeccCChh
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTE---K--P------NLNYKYYPNLIDLASNCQILVVACSLTEE 212 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~---~--~------~~~~~~~~~l~el~~~aDvV~~~lp~~~~ 212 (317)
.-|+||||+|||+|.-|++=|..|+..|.+|.+--|.. . + ..+. ...+..|+++.||+|.+.+|+..+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf-~v~~~~eA~~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGF-KVGTYEELIPQADLVINLTPDKQH 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTC-EEEEHHHHGGGCSEEEECSCGGGH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCC-EecCHHHHHHhCCEEEEeCChhhH
Confidence 45899999999999999999999999999987654411 0 0 1222 235789999999999999997655
Q ss_pred hhccccHHHHhccCCCcEEEEeCCCc
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
.. +. ++..+.||+|+.+. .++|=
T Consensus 112 ~~-vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 SD-VV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp HH-HH-HHHGGGSCTTCEEE-ESSCH
T ss_pred HH-HH-HHHHhhCCCCCEEE-ecCcc
Confidence 44 44 46889999999976 56664
No 162
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.88 E-value=2.2e-05 Score=73.73 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=65.8
Q ss_pred cCCeEEEEecChhHHHHHHHHh-hCCC-EEEEeCCCCCCC-------C---C--ccccCCHHHhcccCCEEEEeccCChh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAE-AFDC-IIGYNSRTEKPN-------L---N--YKYYPNLIDLASNCQILVVACSLTEE 212 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~-~~G~-~V~~~~~~~~~~-------~---~--~~~~~~l~el~~~aDvV~~~lp~~~~ 212 (317)
.++++||||.|.+|+.+++.+. ..+. +|.+|+|++... . + .....++++++++||+|++++|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 4579999999999999998874 3454 799999975431 0 2 2235689999999999999999762
Q ss_pred hhccccHHHHhccCCCcEEEEeCCC
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
...++.. +.+++|..++++|..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 3345554 457899999999863
No 163
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.82 E-value=5e-05 Score=70.05 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=73.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC---CC---------------ccccCCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN---LN---------------YKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---~~---------------~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
++|+|||.|.||..+|..|...|.+|.+++|+.... .+ .....+++++.+.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 589999999999999999999999999999865210 00 011245667767899999999966
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
. +...+ +..-..+++++++|.+.-|= -.++.+.+.+...++.
T Consensus 83 ~-~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 83 E-GADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVI 124 (320)
T ss_dssp T-TCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEE
T ss_pred C-hHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEE
Confidence 4 23333 33445678889999987762 2346677777655554
No 164
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.80 E-value=5.1e-05 Score=73.25 Aligned_cols=133 Identities=13% Similarity=0.117 Sum_probs=81.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC------------CCC-------------ccccCCHHHhcccCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP------------NLN-------------YKYYPNLIDLASNCQ 201 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~------------~~~-------------~~~~~~l~el~~~aD 201 (317)
+-.+|+|||+|.+|..+|..+...|++|+++|.++++ +.+ ..+..+.++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 3468999999999999999999999999999976432 011 113457788899999
Q ss_pred EEEEeccCChhhhcccc--------HHHHhcc---CCCcEEEEeCCCcccCHHHHH-HHHHhCCceEEEee-CCCCCCCC
Q 042102 202 ILVVACSLTEETQHIVN--------RQVINAL---GPKGVLINIGRGLLVDEHELV-SALLQGRLGGAGLD-VFEHEPDV 268 (317)
Q Consensus 202 vV~~~lp~~~~t~~li~--------~~~l~~m---k~gavlVN~~rg~~vd~~aL~-~al~~g~i~ga~lD-V~~~EP~~ 268 (317)
++++|+|-.....+-.| +..-+.| .+|.++|.-|.-.+=-.+.+. ..+++.. .+.-++ ++.+|-..
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl~ 178 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFLR 178 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCCC
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCccccc
Confidence 99999874221111111 2222334 368899998875553333333 3343322 211122 24566554
Q ss_pred Cc----ccCCCCceEE
Q 042102 269 PE----ELIGLENVVL 280 (317)
Q Consensus 269 ~~----~L~~~pnvi~ 280 (317)
+. .+...|++++
T Consensus 179 eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 179 EGSALEDFFKPDRIVI 194 (444)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred CCccccccccCCcEEE
Confidence 42 4667777763
No 165
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.80 E-value=1.6e-05 Score=75.02 Aligned_cols=113 Identities=15% Similarity=0.063 Sum_probs=77.1
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC----Cc-------cccCCHHHhcccCCEEEEeccCChhh
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL----NY-------KYYPNLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~-------~~~~~l~el~~~aDvV~~~lp~~~~t 213 (317)
+-++++|+|+|+|.||+.+++.|... .+|.+++|+.++.. .. ....+++++++++|+|+.++|.....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH
Confidence 34688999999999999999999877 89999998764321 11 11235778899999999998854321
Q ss_pred hccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCC
Q 042102 214 QHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEP 266 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP 266 (317)
. + ....++.|..+++++-- .-+..+|.+..++..+. .+.-..-.|
T Consensus 92 ~-v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~--~l~g~G~dP 136 (365)
T 2z2v_A 92 K-S----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT--IVFDAGFAP 136 (365)
T ss_dssp H-H----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE--EECSCBTTT
T ss_pred H-H----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE--EEECCCCcc
Confidence 1 1 23456789999998752 33445677777777665 444444445
No 166
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.79 E-value=9.3e-06 Score=74.23 Aligned_cols=100 Identities=9% Similarity=0.118 Sum_probs=68.3
Q ss_pred CeEEEEecChhHHHHHHHHhhC-----C-CEEEEeCCCCCCC------CCccccC-------------CHHHhcccCCEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-----D-CIIGYNSRTEKPN------LNYKYYP-------------NLIDLASNCQIL 203 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-----G-~~V~~~~~~~~~~------~~~~~~~-------------~l~el~~~aDvV 203 (317)
++|+|||+|.||..+|..|... | .+|.+++| .... .+..... +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 4899999999999999999887 8 99999998 3210 1211110 223457889999
Q ss_pred EEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCH-HHHHHHHHhCC
Q 042102 204 VVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDE-HELVSALLQGR 253 (317)
Q Consensus 204 ~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~-~aL~~al~~g~ 253 (317)
++++|... +..++ +.....++++.++|++.-| +.. +.+.+.+...+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPDTV 134 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCTTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCCCc
Confidence 99999765 34443 3444557788999998776 333 45555554433
No 167
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.76 E-value=1.9e-05 Score=72.89 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=67.1
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CC-------------ccccCCHHHhcccCCEEEEec
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LN-------------YKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~-------------~~~~~~l~el~~~aDvV~~~l 207 (317)
...++|+|||.|.||..+|..|...|.+|..+ ++++.. .+ .....++++ ++.+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 45679999999999999999999999999988 543210 00 011234544 58999999999
Q ss_pred cCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHH
Q 042102 208 SLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALL 250 (317)
Q Consensus 208 p~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~ 250 (317)
|.. .++.++ +..-..+++++++|.+.-|=- .++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHcC
Confidence 965 445444 334456788999999977632 2245555553
No 168
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.75 E-value=2.2e-05 Score=72.94 Aligned_cols=87 Identities=14% Similarity=0.205 Sum_probs=63.8
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCc-------------cccCCHHHhcccCCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNY-------------KYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~-------------~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
.++|+|||.|.||..+|..|...|.+|.+++|..... .+. ....++++ ++.+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 3689999999999999999999999999999842110 111 11246666 5889999999996
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
..+..++ +..-..+++++++|.+..|
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 3444443 2333456789999999888
No 169
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.75 E-value=5.5e-05 Score=70.11 Aligned_cols=82 Identities=16% Similarity=0.202 Sum_probs=63.1
Q ss_pred cCCeEEEEecChhHHHHHHHHhh-CCC-EEEEeCCCCCCCC-----------CccccCCHHHhcccCCEEEEeccCChhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEA-FDC-IIGYNSRTEKPNL-----------NYKYYPNLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~-~G~-~V~~~~~~~~~~~-----------~~~~~~~l~el~~~aDvV~~~lp~~~~t 213 (317)
..++++|||.|.+|+.+++.+.. .+. +|.+|+|+++... ... ..++++++ ++|+|++++|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 45699999999999999998876 444 7899999864321 123 56889999 9999999999642
Q ss_pred hccccHHHHhccCCCcEEEEeCC
Q 042102 214 QHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~r 236 (317)
.++.. +.+++|..++++|.
T Consensus 200 -pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 -PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp -CCBCG---GGCCTTCEEEECSC
T ss_pred -ceecH---HHcCCCeEEEECCC
Confidence 45543 45789999999964
No 170
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.73 E-value=9.4e-05 Score=67.55 Aligned_cols=79 Identities=18% Similarity=0.290 Sum_probs=65.3
Q ss_pred cccccCCeEEEEecChh-HHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHH
Q 042102 143 TTKFTGKSVGILGMGRI-GTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~i-G~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
+.++.||++.|||-+++ |+.+|..|...|++|+.+... ..++.+..++||+|+.++. ..++|..+.
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~---------T~dl~~~~~~ADIvV~A~G----~p~~i~~d~ 240 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR---------TQNLPELVKQADIIVGAVG----KAELIQKDW 240 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHHTCSEEEECSC----STTCBCGGG
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCC---------CCCHHHHhhcCCeEEeccC----CCCcccccc
Confidence 34699999999998865 999999999999999877542 2478999999999999876 346787765
Q ss_pred HhccCCCcEEEEeCCC
Q 042102 222 INALGPKGVLINIGRG 237 (317)
Q Consensus 222 l~~mk~gavlVN~~rg 237 (317)
.|+|+++||+|--
T Consensus 241 ---vk~GavVIDVGin 253 (303)
T 4b4u_A 241 ---IKQGAVVVDAGFH 253 (303)
T ss_dssp ---SCTTCEEEECCCB
T ss_pred ---ccCCCEEEEecee
Confidence 5899999999853
No 171
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.72 E-value=1.9e-05 Score=63.89 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=59.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc----cCC---HHHh-cccCCEEEEeccCChhhhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY----YPN---LIDL-ASNCQILVVACSLTEETQH 215 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~----~~~---l~el-~~~aDvV~~~lp~~~~t~~ 215 (317)
.++.|+|+|.+|+.+++.|+..|++|.+++++++.. .+... ..+ +.++ +.++|+|++++|....+..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHH
Confidence 479999999999999999999999999999876432 12211 112 2332 5789999999997766543
Q ss_pred cccHHHHhccCCCcEEEEe
Q 042102 216 IVNRQVINALGPKGVLINI 234 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~ 234 (317)
++ ..++.+.++..+|-.
T Consensus 88 ~~--~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 88 IV--ASARAKNPDIEIIAR 104 (140)
T ss_dssp HH--HHHHHHCSSSEEEEE
T ss_pred HH--HHHHHHCCCCeEEEE
Confidence 32 345556666666654
No 172
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.69 E-value=8.8e-05 Score=68.14 Aligned_cols=105 Identities=13% Similarity=0.158 Sum_probs=71.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC---CCc--------------cccCCHHHhcccCCEEEEeccCCh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN---LNY--------------KYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---~~~--------------~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
++|+|||.|.||..+|..|...|.+|.+++|+.... .+. ....+.++ ++.+|+|++++|...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~~ 81 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTFA 81 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCCC
Confidence 589999999999999999999999999999865210 010 01234544 678999999999553
Q ss_pred hhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEE
Q 042102 212 ETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGA 257 (317)
Q Consensus 212 ~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga 257 (317)
++..+ +..-..+++++++|.+.-|= -.++.+.+.+...++.++
T Consensus 82 -~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 82 -NSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIGG 124 (312)
T ss_dssp -GGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEEE
T ss_pred -cHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEEE
Confidence 33332 33445678899999987762 225566676665565443
No 173
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.69 E-value=4.9e-05 Score=60.42 Aligned_cols=85 Identities=15% Similarity=0.200 Sum_probs=56.9
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccc----cCCHH---Hh-cccCCEEEEeccCChhh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKY----YPNLI---DL-ASNCQILVVACSLTEET 213 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~----~~~l~---el-~~~aDvV~~~lp~~~~t 213 (317)
+++|+|+|+|.+|+.+++.|...|.+|.++++++... .+... ..+.+ +. +.++|+|++++|....+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 5789999999999999999999999999998865321 12111 11222 22 67899999998865433
Q ss_pred hccccHHHHhccCCCcEEEEe
Q 042102 214 QHIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~ 234 (317)
. .-....+.++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 223345567777666543
No 174
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.68 E-value=2e-05 Score=71.71 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=70.6
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCCC---------ccccCCHHHhcccCCEEEEeccCChhhh
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNLN---------YKYYPNLIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~---------~~~~~~l~el~~~aDvV~~~lp~~~~t~ 214 (317)
++.|+++.|+|.|.+|+.++..|...|+ +|.+++|+..+... .....+++++..++|+|+.++|..-...
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC---
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCC
Confidence 5789999999999999999999999997 89999997643210 0112245566688999999999753321
Q ss_pred -ccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 215 -HIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 215 -~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
-.+.. +.++++.+++++.-.+ ..+. |+++.++.
T Consensus 203 ~~~l~~---~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~ 236 (281)
T 3o8q_A 203 LPAIDP---VIFSSRSVCYDMMYGK-GYTV-FNQWARQH 236 (281)
T ss_dssp -CSCCG---GGEEEEEEEEESCCCS-SCCH-HHHHHHHT
T ss_pred CCCCCH---HHhCcCCEEEEecCCC-ccCH-HHHHHHHC
Confidence 12333 3467888999987654 3444 44444443
No 175
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.64 E-value=2.5e-05 Score=70.63 Aligned_cols=96 Identities=14% Similarity=0.029 Sum_probs=59.7
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCC------c---cccCCHHHhcc-cCCEEEEeccCChhhh
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLN------Y---KYYPNLIDLAS-NCQILVVACSLTEETQ 214 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~------~---~~~~~l~el~~-~aDvV~~~lp~~~~t~ 214 (317)
.+.|++++|+|.|.+|++++..|...|.+|.+++|+..+... . ....+++++.+ ++|+|+.++|......
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~ 195 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGG 195 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-----
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCC
Confidence 467899999999999999999999999999999997543210 0 00123334434 8999999998654311
Q ss_pred c-cccHHHHhccCCCcEEEEeCCCcccCHH
Q 042102 215 H-IVNRQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 215 ~-li~~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
- -+..+. ++++.+++|+.-....+..
T Consensus 196 ~~~i~~~~---l~~~~~v~D~~y~p~~~t~ 222 (272)
T 1p77_A 196 TASVDAEI---LKLGSAFYDMQYAKGTDTP 222 (272)
T ss_dssp --CCCHHH---HHHCSCEEESCCCTTSCCH
T ss_pred CCCCCHHH---cCCCCEEEEeeCCCCcCCH
Confidence 0 022222 2455666666654433233
No 176
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.64 E-value=5.4e-05 Score=70.12 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=73.9
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC--------------------C---C-------ccccCCHHHhc
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN--------------------L---N-------YKYYPNLIDLA 197 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~--------------------~---~-------~~~~~~l~el~ 197 (317)
-.+|+|||.|.||+.+|..+...|++|..+|++++.. . . .....++.+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 4589999999999999999999999999999875320 0 0 01246788999
Q ss_pred ccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHH
Q 042102 198 SNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSAL 249 (317)
Q Consensus 198 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al 249 (317)
+.||+|+=++|-+-+.+.-+-++.=+.++++++|-...++ +....+.+.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~ 135 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGL 135 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTC
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhc
Confidence 9999999999988887654545555668999998544443 3445565554
No 177
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.63 E-value=6.7e-05 Score=67.69 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=62.5
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------Cc---cccCCHHHhc-ccCCEEEEeccCChhhh
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------NY---KYYPNLIDLA-SNCQILVVACSLTEETQ 214 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~---~~~~~l~el~-~~aDvV~~~lp~~~~t~ 214 (317)
.+.|+++.|+|.|.+|+.+++.|...|.+|.+++|+..+.. +. ....+++++. .++|+|+.++|.....
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~- 194 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG- 194 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT-
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC-
Confidence 46789999999999999999999999999999998754210 00 0112333433 5899999999865431
Q ss_pred cc--ccHHHHhccCCCcEEEEeCCCc
Q 042102 215 HI--VNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 215 ~l--i~~~~l~~mk~gavlVN~~rg~ 238 (317)
.+ +..+ .++++.+++|+.-..
T Consensus 195 ~~~~i~~~---~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPSS---LIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCGG---GCCTTCEEEESCCCS
T ss_pred CCCCCCHH---HcCCCCEEEEeccCC
Confidence 11 2222 256788888887654
No 178
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.61 E-value=9.6e-05 Score=69.96 Aligned_cols=154 Identities=17% Similarity=0.202 Sum_probs=102.0
Q ss_pred CcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCC-
Q 042102 94 GIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDC- 172 (317)
Q Consensus 94 gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~- 172 (317)
.|++.|. + -.-+|=-+++.+++.+| + .+..+...+|.|+|.|..|..+|+.+.++|.
T Consensus 156 ~ipvf~D-D--iqGTa~V~lAall~al~-l------------------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~ 213 (398)
T 2a9f_A 156 HIPVFHD-D--QHGTAIVVLAAIFNSLK-L------------------LKKSLDEVSIVVNGGGSAGLSITRKLLAAGAT 213 (398)
T ss_dssp SSCEEEH-H--HHHHHHHHHHHHHHHHH-T------------------TTCCTTSCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred Ccceecc-h--hhhHHHHHHHHHHHHHH-H------------------hCCCCCccEEEEECCCHHHHHHHHHHHHcCCC
Confidence 5888883 2 12344445555555544 1 2446888999999999999999999999999
Q ss_pred EEEEeCCCC-----C-C-CCCc-----------cccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEe
Q 042102 173 IIGYNSRTE-----K-P-NLNY-----------KYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 173 ~V~~~~~~~-----~-~-~~~~-----------~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~ 234 (317)
+|+.+|++. . . .... ....+|+|+++.+|+++-.- .-+++.++.++.|+++++++.+
T Consensus 214 ~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 214 KVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIFAM 288 (398)
T ss_dssp EEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEEEC
T ss_pred eEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEEEC
Confidence 899998762 1 1 1110 01346999999999887662 2589999999999999999999
Q ss_pred CCCcccCHHHHHHHHHhCC-ceEEEeeCCCCCCCCCcccCCCCceEEcccCC
Q 042102 235 GRGLLVDEHELVSALLQGR-LGGAGLDVFEHEPDVPEELIGLENVVLLPHVA 285 (317)
Q Consensus 235 ~rg~~vd~~aL~~al~~g~-i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a 285 (317)
|+... |-.-.++.+.|+ |-+.+ -... .-+..|+++-|=++
T Consensus 289 sNPt~--E~~pe~a~~~g~~i~atG---rs~~------p~Q~NN~~~FPgi~ 329 (398)
T 2a9f_A 289 ANPIP--EIYPDEALEAGAYIVGTG---RSDF------PNQINNVLAFPGIF 329 (398)
T ss_dssp CSSSC--SSCHHHHHTTTCSEEEES---CTTS------SSBCCGGGTHHHHH
T ss_pred CCCCc--cCCHHHHHHhCCeEEEeC---CCCC------CCcCCceeEcchHH
Confidence 98653 222223333466 33222 1111 23556777777554
No 179
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.60 E-value=3.5e-05 Score=59.39 Aligned_cols=84 Identities=12% Similarity=0.123 Sum_probs=56.2
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCC-CEEEEeCCCCCCC-----CCcc-------ccCCHHHhcccCCEEEEeccCChhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFD-CIIGYNSRTEKPN-----LNYK-------YYPNLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~-----~~~~-------~~~~l~el~~~aDvV~~~lp~~~~t 213 (317)
.+++|+|+|.|.||+.+++.|...| .+|.++++++... .+.. ...++.++++++|+|+.+.|....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~- 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT- 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH-
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh-
Confidence 3579999999999999999999999 8999998875321 1111 112355678889999998874321
Q ss_pred hccccHHHHhccCCCcEEEEeC
Q 042102 214 QHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~ 235 (317)
..++. ...+.|...++.+
T Consensus 83 ~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC
T ss_pred HHHHH----HHHHhCCCEEEec
Confidence 11111 1234566666664
No 180
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.59 E-value=6e-05 Score=60.11 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=57.5
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc-c---cCC---HHHh-cccCCEEEEeccCChh
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK-Y---YPN---LIDL-ASNCQILVVACSLTEE 212 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~-~---~~~---l~el-~~~aDvV~~~lp~~~~ 212 (317)
+.++++.|+|+|.+|+.+++.|...|++|.++++++... .+.. . ..+ +.++ +.++|+|+.+++...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 567889999999999999999999999998888764321 1111 1 122 2333 6789999999886522
Q ss_pred hhccccHHHHhccCCCcEEEEeCCCc
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
+. +.-....+.+.+. .+|-...+.
T Consensus 84 ~~-~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 AS-TLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HH-HHHHHHHHHTTCS-EEEEECCSH
T ss_pred HH-HHHHHHHHHcCCC-eEEEEeCCH
Confidence 21 1223344556665 455544443
No 181
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.59 E-value=7.9e-05 Score=67.47 Aligned_cols=105 Identities=17% Similarity=0.065 Sum_probs=68.5
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCCC------c--cccCCHHHhc-ccCCEEEEeccCChhh
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNLN------Y--KYYPNLIDLA-SNCQILVVACSLTEET 213 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~------~--~~~~~l~el~-~~aDvV~~~lp~~~~t 213 (317)
.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++... . ....+++++- .++|+|+.++|..-..
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~ 195 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTA 195 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGT
T ss_pred CCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCC
Confidence 35789999999999999999999999996 89999997643210 0 1112334433 7899999999864321
Q ss_pred h-ccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 214 Q-HIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 214 ~-~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
. -.+.. +.++++.+++++.-.+ ..+.-|..|-+.|
T Consensus 196 ~~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 196 DLPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp CCCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred CCCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 1 12333 3457788888886653 3344333444444
No 182
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.54 E-value=6.8e-05 Score=69.16 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=65.9
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCCC-----------------ccccCCHHHhcccCCEEEEeccC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNLN-----------------YKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
.++|+|||.|.||..+|..+...|. +|..+|++++.... .....++ +.++.||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988888 99999987642111 1112456 778999999999842
Q ss_pred Ch-----------hhhcccc--HHHHhccCCCcEEEEeCCCcccCHHHHHHHH
Q 042102 210 TE-----------ETQHIVN--RQVINALGPKGVLINIGRGLLVDEHELVSAL 249 (317)
Q Consensus 210 ~~-----------~t~~li~--~~~l~~mk~gavlVN~~rg~~vd~~aL~~al 249 (317)
.. ++..++. -+.+....|++++|+++...-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 1111110 1122233579999999875544444555543
No 183
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.52 E-value=5.1e-05 Score=60.98 Aligned_cols=85 Identities=7% Similarity=0.052 Sum_probs=54.8
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc----ccCC---HHHh-cccCCEEEEeccCChhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK----YYPN---LIDL-ASNCQILVVACSLTEET 213 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~----~~~~---l~el-~~~aDvV~~~lp~~~~t 213 (317)
.++++.|+|+|.+|+.+++.|...|.+|.++|++++.. .+.. ...+ +.++ +.++|+|+++.|..+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 45789999999999999999999999999999875421 1111 1122 2222 56899999998844332
Q ss_pred hccccHHHHhccCCCcEEEE
Q 042102 214 QHIVNRQVINALGPKGVLIN 233 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN 233 (317)
+.-....+.+....+++-
T Consensus 85 --~~~~~~a~~~~~~~iia~ 102 (141)
T 3llv_A 85 --LKILKALRSVSDVYAIVR 102 (141)
T ss_dssp --HHHHHHHHHHCCCCEEEE
T ss_pred --HHHHHHHHHhCCceEEEE
Confidence 333344455553344443
No 184
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.51 E-value=0.0003 Score=62.88 Aligned_cols=101 Identities=19% Similarity=0.171 Sum_probs=70.6
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEE-EEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhc
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCII-GYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINA 224 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V-~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~ 224 (317)
-+.++|+++|+|.||+.+++. . ++++ .+|+ ......+.....+++++++++|+|+=|.+ .+ -+.+...+.
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~gelgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RISKDIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSCCCCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-ccccccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHHHHHH
Confidence 456799999999999999998 3 7765 4566 21111233345778999889998887753 22 233345666
Q ss_pred cCCCcEEEEeCCCcccCH---HHHHHHHHhCCce
Q 042102 225 LGPKGVLINIGRGLLVDE---HELVSALLQGRLG 255 (317)
Q Consensus 225 mk~gavlVN~~rg~~vd~---~aL~~al~~g~i~ 255 (317)
++.|.-+|-+|-|.+.|. +.|.++.++|.-+
T Consensus 81 L~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 81 LKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp TTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 888999999999988887 4566666666654
No 185
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.50 E-value=0.00024 Score=68.45 Aligned_cols=106 Identities=13% Similarity=0.160 Sum_probs=78.0
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCC---EEEEeC----CC----CC-C---CCCc-----c------ccCCHHHh
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDC---IIGYNS----RT----EK-P---NLNY-----K------YYPNLIDL 196 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~---~V~~~~----~~----~~-~---~~~~-----~------~~~~l~el 196 (317)
+..+.++++.|+|.|..|+.+++.|...|+ +|+++| |+ .. . .... . ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 346789999999999999999999999998 798888 65 21 1 1110 0 13468889
Q ss_pred cccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCC
Q 042102 197 ASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGR 253 (317)
Q Consensus 197 ~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~ 253 (317)
++++|+++.+.|..+ +++.++.++.|++++++++++.. ..+.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCC
Confidence 999999999988532 56667788899999999999543 34445555555555
No 186
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.50 E-value=5.7e-05 Score=71.79 Aligned_cols=84 Identities=6% Similarity=0.027 Sum_probs=60.5
Q ss_pred CeEEEEecChhHHHHHHHHhh-CCCEEEEeC---CCCCC------CC----------C--c-------cccCCHHHhccc
Q 042102 149 KSVGILGMGRIGTAIAKRAEA-FDCIIGYNS---RTEKP------NL----------N--Y-------KYYPNLIDLASN 199 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~~~~---~~~~~------~~----------~--~-------~~~~~l~el~~~ 199 (317)
++|+|||.|.||..+|..|.. .|.+|.+++ ++++. .. + . ....+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 489999999999999999977 599999998 53210 00 1 0 123467888899
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEe
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~ 234 (317)
+|+|++++|... .+.++ ++....+++++++|+.
T Consensus 83 aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999654 33333 3344557789999984
No 187
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.47 E-value=0.00031 Score=63.86 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=70.7
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC-------------Cccc--cCCHHHhcccCCEEEEecc
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL-------------NYKY--YPNLIDLASNCQILVVACS 208 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-------------~~~~--~~~l~el~~~aDvV~~~lp 208 (317)
.+.|+++.|+|.|.+|+.++..|...|+ +|.+++|+..+.. .... ..++.+.++++|+|+.+.|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 4789999999999999999999999999 7999999864321 0111 2378888899999999999
Q ss_pred CChhhh--ccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 209 LTEETQ--HIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 209 ~~~~t~--~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
..-... -.+. .+.++++.+++++.-.+ ....-|..|-+.|
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G 245 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALG 245 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCc
Confidence 532111 1133 23467788888876544 2333333444444
No 188
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.40 E-value=0.00054 Score=63.25 Aligned_cols=93 Identities=17% Similarity=0.144 Sum_probs=63.5
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCC---CCC----------C--c--cccCC---HHHhcccCCE
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEK---PNL----------N--Y--KYYPN---LIDLASNCQI 202 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~---~~~----------~--~--~~~~~---l~el~~~aDv 202 (317)
.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.+ +.. + . ....+ +.+.++++|+
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence 35889999999999999999999999999 8999999832 110 0 0 11222 4566789999
Q ss_pred EEEeccCC--hhhhc-cccHHHHhccCCCcEEEEeCCCc
Q 042102 203 LVVACSLT--EETQH-IVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 203 V~~~lp~~--~~t~~-li~~~~l~~mk~gavlVN~~rg~ 238 (317)
|+.+.|.. +.... .+. ....++++.+++++.-.+
T Consensus 230 IINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 230 FTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp EEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred EEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 99999853 11111 121 123467788888876544
No 189
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.38 E-value=4.6e-05 Score=69.46 Aligned_cols=91 Identities=15% Similarity=0.122 Sum_probs=63.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCc---cccCCHHHhc-ccCCEEEEeccCChhhhccccH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNY---KYYPNLIDLA-SNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~---~~~~~l~el~-~~aDvV~~~lp~~~~t~~li~~ 219 (317)
++|+|||.|.||..+|..|...|.+|.+++|+.+.. .+. ....+..+.+ ..+|+|++++|... +..++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~-~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQ-LDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGG-HHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccC-HHHHH-H
Confidence 589999999999999999998899999998875321 111 0111233444 88999999999653 44443 2
Q ss_pred HHHhccCCCcEEEEeCCCcccC
Q 042102 220 QVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 220 ~~l~~mk~gavlVN~~rg~~vd 241 (317)
..-..+++++++|.+.-|=-..
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCCG
T ss_pred HHHHhhCCCCEEEEeccCcccH
Confidence 3334567788999988775443
No 190
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.37 E-value=7.7e-05 Score=67.82 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=69.5
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCcc---------------ccCCHHHhcccCCEEEEeccC
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYK---------------YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~---------------~~~~l~el~~~aDvV~~~lp~ 209 (317)
++.|+++.|+|.|.+|+++++.|...| +|.+++|+........ ...++.+.+.++|+|+.+.|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 478899999999999999999999999 9999998754211000 011224567889999999886
Q ss_pred Chhhh--c-cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCc
Q 042102 210 TEETQ--H-IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRL 254 (317)
Q Consensus 210 ~~~t~--~-li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i 254 (317)
..... . .+. ..+.++++.+++|+.-.. ... .|.+..++..+
T Consensus 204 ~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t-~ll~~a~~~G~ 247 (287)
T 1nvt_A 204 GMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LET-VLLKEAKKVNA 247 (287)
T ss_dssp TCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSC-HHHHHHHTTTC
T ss_pred CCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccC-HHHHHHHHCCC
Confidence 53211 0 120 134578899999998643 233 35554444433
No 191
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.32 E-value=0.00033 Score=63.70 Aligned_cols=104 Identities=10% Similarity=0.117 Sum_probs=69.5
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC----Cc--cccCCHHHhcccCCEEEEeccCC--hhhh-
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL----NY--KYYPNLIDLASNCQILVVACSLT--EETQ- 214 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~----~~--~~~~~l~el~~~aDvV~~~lp~~--~~t~- 214 (317)
++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++.. .. ....++.+ + ++|+|+.++|.. +...
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~ 196 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGE 196 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTC
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCcc
Confidence 4789999999999999999999999998 8999998864321 11 11223334 4 899999999863 2211
Q ss_pred ccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 215 HIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
-.+..+. ++++.+++++.-.+. .+ .|+++.++..+.
T Consensus 197 ~pi~~~~---l~~~~~v~DlvY~P~-~T-~ll~~A~~~G~~ 232 (282)
T 3fbt_A 197 SPVDKEV---VAKFSSAVDLIYNPV-ET-LFLKYARESGVK 232 (282)
T ss_dssp CSSCHHH---HTTCSEEEESCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCCCHHH---cCCCCEEEEEeeCCC-CC-HHHHHHHHCcCe
Confidence 1244443 578889999865442 33 455444444443
No 192
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.30 E-value=0.00055 Score=63.58 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=49.8
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC-------------C----ccccCCHHHhcccCCEEEEec--
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL-------------N----YKYYPNLIDLASNCQILVVAC-- 207 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-------------~----~~~~~~l~el~~~aDvV~~~l-- 207 (317)
.++|+|||.|.+|..+|..|...|. +|..+|+.++... . .....++++.++.||+|+++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3689999999999999999988887 8999998764211 0 112367888899999999998
Q ss_pred cCCh
Q 042102 208 SLTE 211 (317)
Q Consensus 208 p~~~ 211 (317)
|..+
T Consensus 89 p~~~ 92 (331)
T 1pzg_A 89 TKVP 92 (331)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 6443
No 193
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.30 E-value=0.0006 Score=62.50 Aligned_cols=102 Identities=24% Similarity=0.254 Sum_probs=68.1
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCCC------CccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPNL------NYKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
.+|||||+|.||+. +++.++.. |+++. ++|+++.... +...+.+++++..++|+|++++|......
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~----- 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFD----- 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHH-----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHH-----
Confidence 58999999999997 88887654 67765 8888765421 22345677777678999999999654322
Q ss_pred HHHhccCCCc-EEEEe-CCCcccCHHHHHHHHHhCCce
Q 042102 220 QVINALGPKG-VLINI-GRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 220 ~~l~~mk~ga-vlVN~-~rg~~vd~~aL~~al~~g~i~ 255 (317)
-....++.|. +++.- .-..+-+.+.|.++.++..+.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 2223455665 55542 223344566788888777665
No 194
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.29 E-value=0.00046 Score=56.27 Aligned_cols=88 Identities=6% Similarity=-0.041 Sum_probs=58.3
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC---------CCCccc----c---CCHHHh-cccCCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP---------NLNYKY----Y---PNLIDL-ASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~---------~~~~~~----~---~~l~el-~~~aDvV~~~lp~~ 210 (317)
++++.|+|+|.+|+.+++.|...|.+|.+.++++.. ..+... . ..+.++ +.++|.|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 468999999999999999999999999998886310 111111 1 124444 78999999998866
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
+.+. .-....+.+.+...+|...+.
T Consensus 83 ~~n~--~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 83 ADNA--FVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp HHHH--HHHHHHHHHTSSSCEEEECSS
T ss_pred HHHH--HHHHHHHHHCCCCEEEEEECC
Confidence 5433 334455556454555554333
No 195
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.26 E-value=0.00022 Score=65.45 Aligned_cols=62 Identities=15% Similarity=0.231 Sum_probs=47.3
Q ss_pred CeEEEEecChhHHHHHHHHhhCC--CEEEEeCCCCCCCC---------------Cccc-cCCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD--CIIGYNSRTEKPNL---------------NYKY-YPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G--~~V~~~~~~~~~~~---------------~~~~-~~~l~el~~~aDvV~~~lp~~ 210 (317)
++|+|||.|.||..+|..|...| .+|..+|++.+... .... ..++ +.++.||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998778 68999998753210 0111 2456 7789999999999864
Q ss_pred h
Q 042102 211 E 211 (317)
Q Consensus 211 ~ 211 (317)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 4
No 196
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.26 E-value=0.00032 Score=64.02 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=67.9
Q ss_pred CCeEEEEecChhHHH-HHHHHhh-CCCEEE-EeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCChhhhcccc
Q 042102 148 GKSVGILGMGRIGTA-IAKRAEA-FDCIIG-YNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 148 g~~vgIiG~G~iG~~-~a~~l~~-~G~~V~-~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~ 218 (317)
..+|||||+|.||+. .++.++. -++++. ++|+++... .+...+.+++++++++|+|++++|.......
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~--- 82 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEI--- 82 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHH---
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHH---
Confidence 368999999999996 8888876 467775 788876432 1233467899999999999999996544321
Q ss_pred HHHHhccCCCc-EEEE-eCCCcccCHHHHHHHHHhCCce
Q 042102 219 RQVINALGPKG-VLIN-IGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 219 ~~~l~~mk~ga-vlVN-~~rg~~vd~~aL~~al~~g~i~ 255 (317)
....++.|. +++. ..--.+-+.+.|.++.++..+.
T Consensus 83 --~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 83 --IKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp --HHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 223344453 4443 1223334556777777765554
No 197
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.26 E-value=0.00056 Score=63.05 Aligned_cols=63 Identities=17% Similarity=0.260 Sum_probs=50.1
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.+... ++++. ++|+++... .+.. +.+++++++ ++|+|++++|....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTH 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhH
Confidence 4899999999999999999876 77865 688875432 2333 678999998 89999999996544
No 198
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.22 E-value=0.00079 Score=59.86 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=55.4
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEE-EeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGP 227 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ 227 (317)
++|+|+|+|+||+.+++.+...+-++. ++++......+.....++++++ ++|+++-..+. ..+. +.++ ++.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~-----~~~~-l~~ 75 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSNP-NLLF-----PLLD-EDF 75 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSCH-HHHH-----HHHT-SCC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCCh-HHHH-----HHHH-Hhc
Confidence 589999999999999999987655754 5788765545555667888888 99998744321 1222 2333 677
Q ss_pred CcEEEEeCCC
Q 042102 228 KGVLINIGRG 237 (317)
Q Consensus 228 gavlVN~~rg 237 (317)
|.-+|....|
T Consensus 76 g~~vVigTTG 85 (243)
T 3qy9_A 76 HLPLVVATTG 85 (243)
T ss_dssp CCCEEECCCS
T ss_pred CCceEeCCCC
Confidence 7666755555
No 199
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.21 E-value=0.00033 Score=64.63 Aligned_cols=88 Identities=16% Similarity=0.316 Sum_probs=58.7
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCCC--------------cc-ccCCHHHhcccCCEEEEeccCCh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNLN--------------YK-YYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~--------------~~-~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
++|+|||.|.||..++..|...|. +|..+|++++.... .. ...+ .+.++.||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999988888 99999987532100 01 1134 456789999999998643
Q ss_pred h---hh--------ccccHHHHh---ccCCCcEEEEeCCCc
Q 042102 212 E---TQ--------HIVNRQVIN---ALGPKGVLINIGRGL 238 (317)
Q Consensus 212 ~---t~--------~li~~~~l~---~mk~gavlVN~~rg~ 238 (317)
. ++ .++ ++.++ ...|++++|+++-+.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPV 119 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcH
Confidence 2 01 111 22222 235788998875543
No 200
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.20 E-value=0.00025 Score=64.99 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=66.2
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCCC----CccccCCHHHhcc--cCCEEEEeccCChhhhccccHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPNL----NYKYYPNLIDLAS--NCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~----~~~~~~~l~el~~--~aDvV~~~lp~~~~t~~li~~~ 220 (317)
.+|||||+|.||+..++.++.. ++++ .++|+++.... ....+.+++++++ ++|+|++++|...... -
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-----~ 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAE-----I 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHH-----H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHH-----H
Confidence 4899999999999999999876 5765 47887653221 1234568899985 7999999999543322 2
Q ss_pred HHhccCCCc-EEEEe-CCCcccCHHHHHHHHHhCCce
Q 042102 221 VINALGPKG-VLINI-GRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 221 ~l~~mk~ga-vlVN~-~rg~~vd~~aL~~al~~g~i~ 255 (317)
....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 86 ~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 86 TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 223355664 55552 122333456677777665544
No 201
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.20 E-value=0.00087 Score=61.78 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=61.7
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCC---CC----------Cc----cccCCH---HHhcccCCEE
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKP---NL----------NY----KYYPNL---IDLASNCQIL 203 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~---~~----------~~----~~~~~l---~el~~~aDvV 203 (317)
++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.+. .. +. ....++ .+.++++|+|
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 5789999999999999999999999999 89999998322 10 00 112343 5567889999
Q ss_pred EEeccCCh--hhhccc--cHHHHhccCCCcEEEEeCCCc
Q 042102 204 VVACSLTE--ETQHIV--NRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 204 ~~~lp~~~--~t~~li--~~~~l~~mk~gavlVN~~rg~ 238 (317)
+.+.|..- .....+ +. +.++++.+++++.-.+
T Consensus 225 INaTp~Gm~~~~~~~~~~~~---~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 225 TNGTKVGMKPLENESLIGDV---SLLRPELLVTECVYNP 260 (312)
T ss_dssp EECSSTTSTTSTTCCSCCCG---GGSCTTCEEEECCCSS
T ss_pred EECCcCCCCCCCCCcccCCH---HHcCCCCEEEEeccCC
Confidence 99988642 111111 22 3356777777775543
No 202
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.17 E-value=0.00065 Score=62.42 Aligned_cols=63 Identities=16% Similarity=0.260 Sum_probs=48.1
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCC------CC-ccccCCHHHhc-ccCCEEEEeccCCh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPN------LN-YKYYPNLIDLA-SNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~------~~-~~~~~~l~el~-~~aDvV~~~lp~~~ 211 (317)
.+|||||+|.||+.+++.++.. ++++ .++++++... .+ ...+.++++++ .++|+|++++|...
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~ 74 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSL 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGG
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHH
Confidence 3799999999999999999876 5675 4788765421 12 13457899998 78999999999543
No 203
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.16 E-value=0.00084 Score=61.66 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=46.1
Q ss_pred CeEEEEecChhHHHHHHHHhh--CCCEEEEeCCCCCCCC---------------C--ccccCCHHHhcccCCEEEEeccC
Q 042102 149 KSVGILGMGRIGTAIAKRAEA--FDCIIGYNSRTEKPNL---------------N--YKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~--~G~~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
++|+|||.|.+|..+|..|.. +|.+|..+|+.++... . .....++++ ++.||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999976 5789999998764211 0 011245666 8999999999974
No 204
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.15 E-value=0.0013 Score=60.54 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=65.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCCC--CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPNL--NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINA 224 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~--~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~ 224 (317)
.+|||||+|+||+.+++.+... ++++ .+++++..... +...+.++++++.++|+|++++|..... +.....
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~~a 78 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQAPK 78 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHHHH
Confidence 4799999999999999999876 5775 57777643321 2223457788888899999999865332 233455
Q ss_pred cCCCcEEEEeCCCcc-c-CH-HHHHHHHHhCC
Q 042102 225 LGPKGVLINIGRGLL-V-DE-HELVSALLQGR 253 (317)
Q Consensus 225 mk~gavlVN~~rg~~-v-d~-~aL~~al~~g~ 253 (317)
++.|.-+|...-..+ + +. +.|.++.+++.
T Consensus 79 l~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 79 FAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 666776665544332 2 22 45666666554
No 205
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.14 E-value=0.001 Score=61.72 Aligned_cols=87 Identities=21% Similarity=0.245 Sum_probs=58.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---------------C--ccccCCHHHhcccCCEEEEec--c
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---------------N--YKYYPNLIDLASNCQILVVAC--S 208 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDvV~~~l--p 208 (317)
++|+|||.|.+|..+|..+...|. +|..+|++.+... . .....++ +.++.||+|+++. |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999998888 9999998764321 0 1112456 7889999999998 4
Q ss_pred CChh-h--------hcccc--HHHHhccCCCcEEEEeCC
Q 042102 209 LTEE-T--------QHIVN--RQVINALGPKGVLINIGR 236 (317)
Q Consensus 209 ~~~~-t--------~~li~--~~~l~~mk~gavlVN~~r 236 (317)
..+. + ..++. .+.+....|++++++++-
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 3221 1 11110 112223348899988754
No 206
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.14 E-value=0.0011 Score=58.24 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=58.6
Q ss_pred ccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC------C-ccc-cCC-HHHhcccCCEEEEeccCC
Q 042102 140 FKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL------N-YKY-YPN-LIDLASNCQILVVACSLT 210 (317)
Q Consensus 140 ~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~-~~~-~~~-l~el~~~aDvV~~~lp~~ 210 (317)
+|+.-++.|++|.|||.|.+|..-++.|...|++|.++++...+.. + ... ..+ ..+.+..+|+|+.+.. +
T Consensus 23 ~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d 101 (223)
T 3dfz_A 23 YTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-D 101 (223)
T ss_dssp CEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-C
T ss_pred cccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-C
Confidence 5667789999999999999999999999999999999987643210 0 110 011 1245677887776543 3
Q ss_pred hhhhccccHHHHhccCCCcEEEEeC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
++. |.......+ -.++||+.
T Consensus 102 ~~~----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 102 QAV----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp THH----HHHHHHHSC-TTCEEEC-
T ss_pred HHH----HHHHHHHHh-CCCEEEEe
Confidence 332 333333345 55667764
No 207
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.13 E-value=0.00055 Score=62.94 Aligned_cols=102 Identities=17% Similarity=0.131 Sum_probs=63.0
Q ss_pred CeEEEEecChhHHHH-HHHHhhCCCEEE-EeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCChhhhccc
Q 042102 149 KSVGILGMGRIGTAI-AKRAEAFDCIIG-YNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTEETQHIV 217 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~-a~~l~~~G~~V~-~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~~t~~li 217 (317)
.+|||||+|.||+.+ ++.++.-|+++. ++|+++... .+. ..+.+++++++ ++|+|++++|......
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~--- 77 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHRE--- 77 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHH---
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHH---
Confidence 379999999999998 777766778765 778875432 122 24578999987 5999999999543321
Q ss_pred cHHHHhccCCCc-EEEEe-CCCcccCHHHHHHHHHhCCce
Q 042102 218 NRQVINALGPKG-VLINI-GRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 218 ~~~~l~~mk~ga-vlVN~-~rg~~vd~~aL~~al~~g~i~ 255 (317)
-....++.|. +++.- .....-+.+.|.++.++..+.
T Consensus 78 --~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 78 --QTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp --HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 2223345564 44431 112233445566666554443
No 208
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.07 E-value=0.0016 Score=60.24 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=45.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---------------C--ccccCCHHHhcccCCEEEEec
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---------------N--YKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDvV~~~l 207 (317)
++|+|||.|.+|..+|..+...|. +|..+|..++... . .....++ +.++.||+|+++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 589999999999999999998887 8999998764210 1 1112566 7799999999998
No 209
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.06 E-value=0.00046 Score=63.95 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=50.7
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++.. ++++. ++|+++... .+...+.+++++++ ++|+|++++|....
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTH 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhh
Confidence 4899999999999999999876 67765 788765431 23445678999998 89999999996554
No 210
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.05 E-value=0.0012 Score=60.49 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=60.1
Q ss_pred CeEEEEecChhHHHHHHHHhh-CCCEEE-EeCCCCCCCC--Cc--cccCCHHHhcccCCEEEEeccCChhhhccccHHHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEA-FDCIIG-YNSRTEKPNL--NY--KYYPNLIDLASNCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~-~~~~~~~~~~--~~--~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
.+|||||+|.||+.+++.++. -++++. ++|+++.... +. ....++.+. .++|+|++++|..... +-..
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~~~~ 83 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----RTAL 83 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----HHHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----HHHH
Confidence 589999999999999999986 467876 6887664321 11 123455555 7899999999854332 2223
Q ss_pred hccCCCcEEEEeCC--C-cccCHHHHHHHHHhCCc
Q 042102 223 NALGPKGVLINIGR--G-LLVDEHELVSALLQGRL 254 (317)
Q Consensus 223 ~~mk~gavlVN~~r--g-~~vd~~aL~~al~~g~i 254 (317)
..++.|.-++...- + .+.+.+.|.++.++..+
T Consensus 84 ~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~ 118 (304)
T 3bio_A 84 EILKKGICTADSFDIHDGILALRRSLGDAAGKSGA 118 (304)
T ss_dssp HHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCC
Confidence 44566666665432 1 12233566666655443
No 211
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.00085 Score=63.71 Aligned_cols=88 Identities=24% Similarity=0.226 Sum_probs=62.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCC--------CEEEEeCCCCCCC------------------CC------ccccCCHHHh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD--------CIIGYNSRTEKPN------------------LN------YKYYPNLIDL 196 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G--------~~V~~~~~~~~~~------------------~~------~~~~~~l~el 196 (317)
.+|+|||.|..|.++|..|...| .+|..|.|.++.. ++ .....++++.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHH
Confidence 38999999999999999997543 3588887654310 01 1134679999
Q ss_pred cccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc
Q 042102 197 ASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 197 ~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
++.||+|++++|.. ..+.++ ++.-..++++..+|+++-|=
T Consensus 115 l~~ad~ii~avPs~-~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 115 VKDVDIIVFNIPHQ-FLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HTTCSEEEECSCGG-GHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred HhcCCEEEEECChh-hhHHHH-HHhccccCCCceeEEecccc
Confidence 99999999999932 233332 34445678899999998873
No 212
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.03 E-value=0.014 Score=53.60 Aligned_cols=91 Identities=8% Similarity=0.074 Sum_probs=69.0
Q ss_pred cccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEe
Q 042102 145 KFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~ 206 (317)
.+.|.+|+++|=| ++.++.+..+..+|++|.+..+..-... + .....+++++++++|+|..-
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 3789999999986 9999999999999999988876432111 1 22357899999999999883
Q ss_pred ccC-------Chh-----hhccccHHHHhccCCCcEEEEeC
Q 042102 207 CSL-------TEE-----TQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 207 lp~-------~~~-----t~~li~~~~l~~mk~gavlVN~~ 235 (317)
.=. .++ ....++++.++.+||+++|.-+.
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 320 000 12457899999999999999986
No 213
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.03 E-value=0.0011 Score=61.25 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=65.7
Q ss_pred CeEEEEecChhHHHHHHHHh-h-CCCEE-EEeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCChhhhcc
Q 042102 149 KSVGILGMGRIGTAIAKRAE-A-FDCII-GYNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTEETQHI 216 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~-~-~G~~V-~~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~~t~~l 216 (317)
.+|||||+|.||+..++.++ . -|+++ .++|+++... .+. ..+.+++++++ ++|+|++++|......
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-- 86 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE-- 86 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH--
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH--
Confidence 58999999999999999987 5 47775 5778765432 123 34578999986 6999999999543322
Q ss_pred ccHHHHhccCCCcE-EEEe-CCCcccCHHHHHHHHHhC-Cce
Q 042102 217 VNRQVINALGPKGV-LINI-GRGLLVDEHELVSALLQG-RLG 255 (317)
Q Consensus 217 i~~~~l~~mk~gav-lVN~-~rg~~vd~~aL~~al~~g-~i~ 255 (317)
-....++.|.. ++.- .-..+-+.+.|.++.++. .+.
T Consensus 87 ---~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 87 ---MTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ---HHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred ---HHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 22344556653 4421 111222344577777776 554
No 214
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.02 E-value=0.0085 Score=54.79 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=73.4
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-------CccccCCHHHhcccCCEEEEeccC-------
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-------NYKYYPNLIDLASNCQILVVACSL------- 209 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~l~el~~~aDvV~~~lp~------- 209 (317)
.+.|.+|+++|= +++.++.+..+..+|++|.+..+..-... ......+++++++++|+|..-.=.
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 378999999997 89999999999999999988876543221 133467899999999999873320
Q ss_pred -Ch--h--hhccccHHHHhccCCCcEEEEeC---CCcccCH
Q 042102 210 -TE--E--TQHIVNRQVINALGPKGVLINIG---RGLLVDE 242 (317)
Q Consensus 210 -~~--~--t~~li~~~~l~~mk~gavlVN~~---rg~~vd~ 242 (317)
.. + ....++++.++.+||+++|.-+. ||.=|+.
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~ 271 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTE 271 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCH
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCH
Confidence 11 1 12457899999999999999997 5655553
No 215
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.01 E-value=0.0012 Score=60.62 Aligned_cols=102 Identities=9% Similarity=0.046 Sum_probs=63.7
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEEEeCCCCCCC------CCccc-cCCHHHhc-ccCCEEEEeccCChhhhcccc
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIGYNSRTEKPN------LNYKY-YPNLIDLA-SNCQILVVACSLTEETQHIVN 218 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~~~~~~~~~~------~~~~~-~~~l~el~-~~aDvV~~~lp~~~~t~~li~ 218 (317)
.+|||||+|.||+. +++.++.. ++++.++|+++... .+... ..+..+++ .++|+|++++|......
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~---- 78 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST---- 78 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH----
Confidence 47999999999984 88888765 67777888875432 12221 33444555 78999999999443221
Q ss_pred HHHHhccCCCc-EEEEe-CCCcccCHHHHHHHHHhCCce
Q 042102 219 RQVINALGPKG-VLINI-GRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 219 ~~~l~~mk~ga-vlVN~-~rg~~vd~~aL~~al~~g~i~ 255 (317)
-....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 79 -~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 79 -LAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp -HHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 1223445554 55552 112333455677877776665
No 216
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.00 E-value=0.00059 Score=63.52 Aligned_cols=64 Identities=17% Similarity=0.225 Sum_probs=50.7
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCccccCCHHHhc--ccCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNYKYYPNLIDLA--SNCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~el~--~~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++.. ++++. ++|+++... .+...+.++++++ .+.|+|++++|....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHH
Confidence 5899999999999999999887 78854 778875432 1333467899999 669999999997654
No 217
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.00 E-value=0.00098 Score=61.48 Aligned_cols=64 Identities=14% Similarity=0.139 Sum_probs=50.1
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++.. +++|. ++|++.... .+. ..+.+++++++ ++|+|++++|....
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGH 80 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHH
Confidence 5899999999999999999875 67765 678776432 122 34678999987 79999999996643
No 218
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.98 E-value=0.00079 Score=63.50 Aligned_cols=61 Identities=23% Similarity=0.410 Sum_probs=47.1
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC----Ccc---ccCC---HHHhcccCCEEEE
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL----NYK---YYPN---LIDLASNCQILVV 205 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~---~~~~---l~el~~~aDvV~~ 205 (317)
.+.|+||+|+|.|.+|+.+++.++.+|++|+++|+.+.... ... .+.+ +.++++++|+|+.
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 47899999999999999999999999999999887654321 111 1222 6678889999865
No 219
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.96 E-value=0.00055 Score=62.74 Aligned_cols=101 Identities=17% Similarity=0.269 Sum_probs=62.7
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcccc---------CCH-HHhcccCCEEEEeccCChhh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYY---------PNL-IDLASNCQILVVACSLTEET 213 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~---------~~l-~el~~~aDvV~~~lp~~~~t 213 (317)
++|+|||.|.||..++..|. .|.+|.+++|+.... .+.... .+. .+....+|+|++++|... +
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~-~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQ-L 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGG-H
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHH-H
Confidence 68999999999999999999 899999999875321 111000 001 245678999999998542 3
Q ss_pred hccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 214 QHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
...+ +.++.+.++. +|.+.-|=- .++.+.+.+-..++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEE
Confidence 3332 2233345566 787766632 223444443444443
No 220
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.96 E-value=0.00087 Score=61.39 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=65.5
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------C------cc-ccCCHHHhcccCCEEEEeccCCh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------N------YK-YYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------~------~~-~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
++|+|||.|.+|..+|..+...|. +|..+|+...... . .. ...+ .+.++.||+|+++.+...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 489999999999999999998888 8999998653110 0 00 1123 367899999999985332
Q ss_pred h-----------hhcccc--HHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEE
Q 042102 212 E-----------TQHIVN--RQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGA 257 (317)
Q Consensus 212 ~-----------t~~li~--~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga 257 (317)
. +..++. .+.+....|++++|+++-+.=+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 111111 122333468999999765443333344444444566544
No 221
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.96 E-value=0.00056 Score=59.17 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=55.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccc----cC---CHHHh-cccCCEEEEeccCChhhh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKY----YP---NLIDL-ASNCQILVVACSLTEETQ 214 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~----~~---~l~el-~~~aDvV~~~lp~~~~t~ 214 (317)
++|.|+|+|.+|+.+|+.|...|.+|.+++++++.. .+... .. .+.++ +.++|+|+++++....+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 80 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNL 80 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHH
Confidence 479999999999999999999999999998765421 11111 11 24444 788999999998765433
Q ss_pred ccccHHHHhccCCCcEEEE
Q 042102 215 HIVNRQVINALGPKGVLIN 233 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN 233 (317)
+-....+.+.+...+|-
T Consensus 81 --~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 81 --FIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp --HHHHHHHHTSCCCEEEE
T ss_pred --HHHHHHHHHcCCCeEEE
Confidence 22333343333444443
No 222
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.94 E-value=0.00051 Score=63.98 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=50.6
Q ss_pred CCeEEEEecChhHHHHHHHHhhC--CCEEE-EeCCCCCCC------CCccccCCHHHhcc--cCCEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAF--DCIIG-YNSRTEKPN------LNYKYYPNLIDLAS--NCQILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~--G~~V~-~~~~~~~~~------~~~~~~~~l~el~~--~aDvV~~~lp~~~ 211 (317)
-.+|||||+|.||+..++.++.. ++++. ++|+++... .+...+.+++++++ ++|+|++++|...
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 87 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGL 87 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHH
Confidence 35899999999999999999877 78765 788875432 13345678999987 7999999999654
No 223
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.94 E-value=0.0021 Score=58.45 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=68.6
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEE-EeCCCCC--CCCCccccCCHHHhcc--cCCEEEEeccCChhhhccccHHH
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIG-YNSRTEK--PNLNYKYYPNLIDLAS--NCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~-~~~~~~~--~~~~~~~~~~l~el~~--~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
..+|+|+|+ |.+|+..++.++..|++++ .+++... ...+...+.+++++.. ..|++++++|.... ..++ .+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~-~~~~-~ea 84 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFC-KDSI-LEA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGH-HHHH-HHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHH-HHHH-HHH
Confidence 468999999 9999999999988898854 5666421 2234445778999988 89999999995432 2222 222
Q ss_pred HhccCCC-cEEEEeCCCcc-cCHHHHHHHHHhCCce
Q 042102 222 INALGPK-GVLINIGRGLL-VDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~g-avlVN~~rg~~-vd~~aL~~al~~g~i~ 255 (317)
+ +.| ..+|..+.|-- -+.+.|.++.++..+.
T Consensus 85 ~---~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 85 I---DAGIKLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp H---HTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred H---HCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2 233 23344555432 3455888888877665
No 224
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.93 E-value=0.00064 Score=60.51 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=59.7
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCC-------------------CCC-----------CCcc--c-
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTE-------------------KPN-----------LNYK--Y- 189 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~-------------------~~~-----------~~~~--~- 189 (317)
..|.+++|.|||+|.+|..+++.|...|. ++.++|+.. .+. .... .
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 45889999999999999999999999998 888888764 110 0000 0
Q ss_pred ---c--CCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEe
Q 042102 190 ---Y--PNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 190 ---~--~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~ 234 (317)
. .+++++++++|+|+.+++ +.+++.++++...+. |..+|+.
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 124567888999988875 456776776554442 3335554
No 225
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.89 E-value=0.0024 Score=58.83 Aligned_cols=64 Identities=6% Similarity=0.104 Sum_probs=48.9
Q ss_pred CeEEEEecChhHH-HHHHHHhhCCCEE-EEeCCCCCCCC-------CccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGT-AIAKRAEAFDCII-GYNSRTEKPNL-------NYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~-~~a~~l~~~G~~V-~~~~~~~~~~~-------~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.+|. .++..++.-|+++ .++|+++.... ....+.+++++++ +.|+|++++|....
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 79 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDR 79 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGH
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhH
Confidence 5899999999996 6777777678886 57888765431 2345678999987 68999999996543
No 226
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.88 E-value=0.013 Score=53.72 Aligned_cols=91 Identities=11% Similarity=0.180 Sum_probs=67.2
Q ss_pred cccCCeEEEEecC---hhHHHHHHHHhhCCCEEEEeCCCCCCC--CCccccCCHHHhcccCCEEEEeccCCh--------
Q 042102 145 KFTGKSVGILGMG---RIGTAIAKRAEAFDCIIGYNSRTEKPN--LNYKYYPNLIDLASNCQILVVACSLTE-------- 211 (317)
Q Consensus 145 ~l~g~~vgIiG~G---~iG~~~a~~l~~~G~~V~~~~~~~~~~--~~~~~~~~l~el~~~aDvV~~~lp~~~-------- 211 (317)
.+.|.+|++||=| ++.++.+..+..||++|.+..|..-.. .......+++|+++++|+|..-.-..+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~ 223 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQ 223 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchhhccccchhH
Confidence 3789999999975 699999999999999998877632111 111235689999999999877421111
Q ss_pred ---hhhccccHHHHhccCCCcEEEEeC
Q 042102 212 ---ETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 212 ---~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
.....++.+.++.+|++++|.-+.
T Consensus 224 ~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 224 EGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp TTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred HHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 112457889999999999998885
No 227
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.88 E-value=0.0018 Score=51.37 Aligned_cols=99 Identities=20% Similarity=0.166 Sum_probs=71.8
Q ss_pred CeEEEEec----ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhc
Q 042102 149 KSVGILGM----GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINA 224 (317)
Q Consensus 149 ~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~ 224 (317)
++|+|||. |..|..+.+.|+..|++|+-.++....-.+...+.++.++-. -|++++++|.. .+..++.+ ...
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~~-~v~~~v~e--~~~ 80 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYINPQ-NQLSEYNY--ILS 80 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSCHH-HHGGGHHH--HHH
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeCHH-HHHHHHHH--HHh
Confidence 68999998 568999999999999999998887655566666778888877 99999999843 33444432 223
Q ss_pred cCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 225 LGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 225 mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+...+++++.| - .++.+.+..++..++
T Consensus 81 ~g~k~v~~~~G--~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 81 LKPKRVIFNPG--T--ENEELEEILSENGIE 107 (122)
T ss_dssp HCCSEEEECTT--C--CCHHHHHHHHHTTCE
T ss_pred cCCCEEEECCC--C--ChHHHHHHHHHcCCe
Confidence 34456666543 2 356777777777776
No 228
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.88 E-value=0.0023 Score=59.94 Aligned_cols=64 Identities=14% Similarity=0.211 Sum_probs=48.4
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCC----CCccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPN----LNYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~----~~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+. .+..++.. +++|. ++|+++... .+...+.+++++++ +.|+|++++|....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H 80 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATH 80 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHH
Confidence 48999999999997 67777765 67764 778765432 23345689999998 78999999996543
No 229
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.88 E-value=0.0009 Score=62.37 Aligned_cols=66 Identities=15% Similarity=0.050 Sum_probs=49.6
Q ss_pred cCCeEEEEecChhHH-HHHHHHhhC-CCEEE-EeCCCCCCC------CCccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 147 TGKSVGILGMGRIGT-AIAKRAEAF-DCIIG-YNSRTEKPN------LNYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~-~~a~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.-.+|||||+|.||+ .+++.++.. +++|. ++|+++... .+...+.+++++++ +.|+|++++|....
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h 102 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLH 102 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGH
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHH
Confidence 346899999999998 788888877 77765 778765432 13334578999986 58999999996543
No 230
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.84 E-value=0.00086 Score=64.86 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=66.0
Q ss_pred cCCeEEEEecChh--HHHHHHHHhh----CCCEEEEeCCCCCCC--------------CCccccCCHHHhcccCCEEEEe
Q 042102 147 TGKSVGILGMGRI--GTAIAKRAEA----FDCIIGYNSRTEKPN--------------LNYKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 147 ~g~~vgIiG~G~i--G~~~a~~l~~----~G~~V~~~~~~~~~~--------------~~~~~~~~l~el~~~aDvV~~~ 206 (317)
.+++|+|||.|.+ |..++..+.. .| +|..+|..+... .......+++++++.||+|+.+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 3569999999998 5788877653 46 999999875321 0122346899999999999999
Q ss_pred ccCC-----------hhhhccccH------------------------HHHhccCCCcEEEEeCCCcccCHHHHHH
Q 042102 207 CSLT-----------EETQHIVNR------------------------QVINALGPKGVLINIGRGLLVDEHELVS 247 (317)
Q Consensus 207 lp~~-----------~~t~~li~~------------------------~~l~~mk~gavlVN~~rg~~vd~~aL~~ 247 (317)
++.. |.-.|+... +.+....|++++||++..--+-..++.+
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k 158 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYK 158 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHH
Confidence 9642 223333211 2333446899999997755444444444
No 231
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.84 E-value=0.001 Score=62.23 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=50.3
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC-----CCccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN-----LNYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~-----~~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++.. ++++. ++|+++... .+...+.+++++++ +.|+|++++|....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSH 78 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 5899999999999999999877 67765 678765431 23445678999987 79999999996543
No 232
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.83 E-value=0.0039 Score=63.90 Aligned_cols=110 Identities=17% Similarity=0.163 Sum_probs=76.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC--------------------CC-------ccccCCHHHhcccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN--------------------LN-------YKYYPNLIDLASNCQ 201 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~--------------------~~-------~~~~~~l~el~~~aD 201 (317)
++|||||.|.||+.+|..+...|+.|..+|.+++.. .. .....++ +.+++||
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~aD 395 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTVD 395 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCG-GGGGSCS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcH-HHHhhCC
Confidence 699999999999999999999999999999875321 00 0012233 4578999
Q ss_pred EEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCceEEEeeCC
Q 042102 202 ILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLGGAGLDVF 262 (317)
Q Consensus 202 vV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~ 262 (317)
+|+=++|-+-+.+.-+-++.=+.++++++|-.-.++ +....|.+.+. .+-+.+++=.|
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFf 453 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFF 453 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECC
T ss_pred EEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-Ccccccccccc
Confidence 999999988887765556666678999998544333 44445655542 33333455444
No 233
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.80 E-value=0.0033 Score=56.70 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=65.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC------CccccCCHHHhcccCCEEEEeccCChhh----hc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL------NYKYYPNLIDLASNCQILVVACSLTEET----QH 215 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~l~el~~~aDvV~~~lp~~~~t----~~ 215 (317)
.++++.|+|.|.+|+.++..|...|+ +|.+++|+..+.. +.....++. +.++|+|+.++|..-.. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 46799999999999999999999998 7999999854321 111111222 46899999999965321 11
Q ss_pred -cccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 216 -IVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 216 -li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+..+. ++++.+++|+.-.+ ... .|.+..++..+.
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY~P-~~T-~ll~~A~~~G~~ 231 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVAMP-VET-PFIRYAQARGKQ 231 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCCSS-SSC-HHHHHHHHTTCE
T ss_pred CCCCHHH---cCCCCEEEEeecCC-CCC-HHHHHHHHCCCE
Confidence 133233 45577888887643 233 454544444443
No 234
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.79 E-value=0.011 Score=54.85 Aligned_cols=92 Identities=10% Similarity=0.076 Sum_probs=69.5
Q ss_pred cccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEe
Q 042102 145 KFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~ 206 (317)
.+.|.+|+++|=| ++.++.+..+..+|++|.+..|..-... + .....++++.++++|+|..-
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 4889999999996 9999999999999999988876432111 1 22357899999999998773
Q ss_pred ccC--------Chh-----hhccccHHHHhcc-CCCcEEEEeCC
Q 042102 207 CSL--------TEE-----TQHIVNRQVINAL-GPKGVLINIGR 236 (317)
Q Consensus 207 lp~--------~~~-----t~~li~~~~l~~m-k~gavlVN~~r 236 (317)
.=. ..+ ....++.+.++.+ ||+++|.-+.-
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 320 111 1245789999999 99999999854
No 235
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.77 E-value=0.0025 Score=58.03 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=68.6
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEE-EeCCCCC--CCCCccccCCHHHhcc--cCCEEEEeccCChhhhccccHHH
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIG-YNSRTEK--PNLNYKYYPNLIDLAS--NCQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~-~~~~~~~--~~~~~~~~~~l~el~~--~aDvV~~~lp~~~~t~~li~~~~ 221 (317)
.++|+|+|+ |++|+.+++.++..|++++ ..++... ...+...+.+++++.. .+|++++++|... +...+. +.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~-~~~~~~-ea 84 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPA-AADAAL-EA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHH-HHHHHH-HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHH-HHHHHH-HH
Confidence 468999999 9999999999998899853 5666541 2234555778999988 8999999998432 232332 22
Q ss_pred HhccCCCcE-EEEeCCCc-ccCHHHHHHHHHhCCce
Q 042102 222 INALGPKGV-LINIGRGL-LVDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~gav-lVN~~rg~-~vd~~aL~~al~~g~i~ 255 (317)
. +.|.- +|..+.|= .-+++.+.+..++..+.
T Consensus 85 ~---~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 85 A---HAGIPLIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp H---HTTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H---HCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2 22322 44455442 23456888888877665
No 236
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.76 E-value=0.0011 Score=61.34 Aligned_cols=64 Identities=28% Similarity=0.436 Sum_probs=49.4
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++.. ++++. ++|+++... .+. ..+.+++++++ ++|+|++++|....
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 77 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTH 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcch
Confidence 4899999999999999999875 67765 678875432 122 24678999988 89999999996543
No 237
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.75 E-value=0.002 Score=59.04 Aligned_cols=87 Identities=13% Similarity=0.205 Sum_probs=56.1
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCC-----------CCccccCCHHHhcccCCEEEEeccCCh---
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPN-----------LNYKYYPNLIDLASNCQILVVACSLTE--- 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~-----------~~~~~~~~l~el~~~aDvV~~~lp~~~--- 211 (317)
.++|+|||.|.+|..++..+...|. +|..+|...+.. .......++ +.++.||+|+.+.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3699999999999999999877777 899999876411 011122466 67899999999963211
Q ss_pred -------hhhccccHHH---HhccCCCcEEEEeCC
Q 042102 212 -------ETQHIVNRQV---INALGPKGVLINIGR 236 (317)
Q Consensus 212 -------~t~~li~~~~---l~~mk~gavlVN~~r 236 (317)
.+..++ ++. +....|++++++++-
T Consensus 93 tR~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMF-RALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHTTTCEEEECSS
T ss_pred CHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEcCC
Confidence 111111 122 223348999999876
No 238
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.75 E-value=0.0014 Score=59.94 Aligned_cols=91 Identities=11% Similarity=0.225 Sum_probs=58.1
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------Cc------c-cc-CCHHHhcccCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------NY------K-YY-PNLIDLASNCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------~~------~-~~-~~l~el~~~aDvV~~~lp 208 (317)
..++|+|||.|.+|..++..|...|. +|..+|++..... +. . .. .+ .+.++.||+|+++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECCC
Confidence 34689999999999999999998888 9999998652210 00 0 01 13 356789999999985
Q ss_pred CChh---hh--------cccc--HHHHhccCCCcEEEEeCCCc
Q 042102 209 LTEE---TQ--------HIVN--RQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 209 ~~~~---t~--------~li~--~~~l~~mk~gavlVN~~rg~ 238 (317)
.... ++ .++. .+.+....+++++|+++-|-
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 3321 00 0110 11122236789999886653
No 239
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.69 E-value=0.0012 Score=57.67 Aligned_cols=84 Identities=11% Similarity=0.082 Sum_probs=56.6
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccc----cCC---HHHh-cccCCEEEEeccCChhhhc
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKY----YPN---LIDL-ASNCQILVVACSLTEETQH 215 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~----~~~---l~el-~~~aDvV~~~lp~~~~t~~ 215 (317)
.+++.|+|+|.+|+.+++.|...|. |.+.++++... .+... ..+ ++++ +.++|.|++++|.+..+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n-- 85 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET-- 85 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH--
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH--
Confidence 4589999999999999999999999 99999875421 11111 122 3344 78999999998865443
Q ss_pred cccHHHHhccCCC-cEEEEe
Q 042102 216 IVNRQVINALGPK-GVLINI 234 (317)
Q Consensus 216 li~~~~l~~mk~g-avlVN~ 234 (317)
+.-....+.+.++ .+++.+
T Consensus 86 ~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 86 IHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp HHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHCCCCeEEEEE
Confidence 3334455566666 344443
No 240
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.0011 Score=64.53 Aligned_cols=89 Identities=18% Similarity=0.209 Sum_probs=56.8
Q ss_pred ccccccCCeEEEEecChhHHHHHHHHhhC-CCEEEEeCCCCCCC------CCcc--c--c---CCHHHhcccCCEEEEec
Q 042102 142 MTTKFTGKSVGILGMGRIGTAIAKRAEAF-DCIIGYNSRTEKPN------LNYK--Y--Y---PNLIDLASNCQILVVAC 207 (317)
Q Consensus 142 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~------~~~~--~--~---~~l~el~~~aDvV~~~l 207 (317)
.+..+.+++|+|+|.|.+|+.+++.|... |.+|.+++|+..+. .+.. . . .++.++++.+|+|+.++
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 45578899999999999999999999887 78999999875321 1111 0 1 24567788999999999
Q ss_pred cCChhhhccccHHHHhccCCCcEEEEeC
Q 042102 208 SLTEETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 208 p~~~~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
|..... . +.. ..++.|..+++++
T Consensus 97 p~~~~~-~-v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 97 PYTFHP-N-VVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp CGGGHH-H-HHH---HHHHHTCEEEECS
T ss_pred chhhhH-H-HHH---HHHhcCCEEEEee
Confidence 864221 1 111 2234566666654
No 241
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.69 E-value=0.0019 Score=57.45 Aligned_cols=87 Identities=16% Similarity=0.231 Sum_probs=59.2
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCC------C-------C-----------------Cc--cc-
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKP------N-------L-----------------NY--KY- 189 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~------~-------~-----------------~~--~~- 189 (317)
..|++++|.|+|+|.+|..+++.|...|. ++.++|...-. . . .. ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 46899999999999999999999999998 67777653210 0 0 00 00
Q ss_pred ---c--CCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEe
Q 042102 190 ---Y--PNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 190 ---~--~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~ 234 (317)
. .++.++++++|+|+.+.. +.+++..+++...+. +.-+|+.
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~ 149 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITA 149 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEE
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEE
Confidence 0 134567888999988876 566777777655442 3335554
No 242
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.66 E-value=0.0018 Score=60.92 Aligned_cols=61 Identities=21% Similarity=0.356 Sum_probs=46.4
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCC----cc---cc---CCHHHhcccCCEEEE
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLN----YK---YY---PNLIDLASNCQILVV 205 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~----~~---~~---~~l~el~~~aDvV~~ 205 (317)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+.+..... .. .. ..+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 467899999999999999999999999999998876543211 00 11 225677888998865
No 243
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.65 E-value=0.025 Score=51.89 Aligned_cols=91 Identities=10% Similarity=0.190 Sum_probs=66.1
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCC-CCC---------CccccCCHHHhcccCCEEEEec----cC
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEK-PNL---------NYKYYPNLIDLASNCQILVVAC----SL 209 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~-~~~---------~~~~~~~l~el~~~aDvV~~~l----p~ 209 (317)
.+.|++|++||= +++.++.+..+..||++|.+..|..- +.. ......+++|.++++|+|..-. ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 378999999996 57888888899999999988776321 111 1223578999999999998743 11
Q ss_pred ---Ch-----hhhccccHHHHhccCCCcEEEEeC
Q 042102 210 ---TE-----ETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 210 ---~~-----~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
.+ -....++.+.++.+|++++|.-+.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 00 023457899999999999999886
No 244
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.64 E-value=0.0028 Score=57.15 Aligned_cols=92 Identities=13% Similarity=0.134 Sum_probs=61.7
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCCC----------ccccCCHHHhcccCCEEEEeccCChh-
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNLN----------YKYYPNLIDLASNCQILVVACSLTEE- 212 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~l~el~~~aDvV~~~lp~~~~- 212 (317)
++.|+++.|+|.|..+++++..|...|. +|.+++|+..+... ........+.++++|+|+.+.|..-.
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~ 201 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGT 201 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCST
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCC
Confidence 5778999999999999999999999997 78999987643210 00111122345678999998885321
Q ss_pred -hhccccHHHHhccCCCcEEEEeCC
Q 042102 213 -TQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 213 -t~~li~~~~l~~mk~gavlVN~~r 236 (317)
..--++...++.++++.++.++--
T Consensus 202 ~~~~p~~~~~~~~l~~~~~v~D~vY 226 (269)
T 3tum_A 202 RAELPLSAALLATLQPDTLVADVVT 226 (269)
T ss_dssp TCCCSSCHHHHHTCCTTSEEEECCC
T ss_pred CCCCCCChHHHhccCCCcEEEEEcc
Confidence 111245566666777776666543
No 245
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.64 E-value=0.0012 Score=63.14 Aligned_cols=85 Identities=18% Similarity=0.177 Sum_probs=58.9
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc--c--cCC---HHHh-cccCCEEEEeccCChhhh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK--Y--YPN---LIDL-ASNCQILVVACSLTEETQ 214 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~--~--~~~---l~el-~~~aDvV~~~lp~~~~t~ 214 (317)
+.+|.|+|+|.+|+.+++.|+..|..|++.|+++... .+.. . ..+ |.++ +.+||+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 4579999999999999999999999999998875421 1211 1 122 4444 788999999998765443
Q ss_pred ccccHHHHhccCCCcEEEEe
Q 042102 215 HIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~ 234 (317)
.-....+.+.|...+|--
T Consensus 84 --~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 84 --QLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp --HHHHHHHHHCTTCEEEEE
T ss_pred --HHHHHHHHhCCCCeEEEE
Confidence 233455566676555443
No 246
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.63 E-value=0.0032 Score=57.97 Aligned_cols=64 Identities=16% Similarity=0.247 Sum_probs=48.8
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCCC------Cc-cccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPNL------NY-KYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~------~~-~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++.. ++++ .++|+++.... +. ..+.+++++++ +.|+|++++|....
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDH 80 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGH
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 5899999999999999988765 4565 47787765432 22 24678999998 79999999996543
No 247
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.63 E-value=0.0024 Score=58.83 Aligned_cols=93 Identities=16% Similarity=0.209 Sum_probs=59.3
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCCC---------------ccccCCHHHhcccCCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNLN---------------YKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~---------------~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
.++|+|||.|.||..++..++..|. +|..+|+..+...+ .....+..+.++.||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3699999999999999999976664 89999986532110 000123456799999999997654
Q ss_pred hhh-----------hcccc--HHHHhccCCCcEEEEeCCCcccCH
Q 042102 211 EET-----------QHIVN--RQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 211 ~~t-----------~~li~--~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
..- ..++. .+.+....|++++++++. .+|.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN--Pv~~ 128 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN--PVDI 128 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS--SHHH
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC--chHH
Confidence 310 01110 112233358899999744 5544
No 248
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.61 E-value=0.026 Score=52.05 Aligned_cols=97 Identities=13% Similarity=0.172 Sum_probs=71.2
Q ss_pred cccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEe
Q 042102 145 KFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~ 206 (317)
.+.|.+|+++|=| ++.++.+..+..||++|.+..|..-... + .....+++++++++|+|..-
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 3789999999996 9999999999999999998876432111 1 22357899999999998873
Q ss_pred ccC-------Chh-----hhccccHHHHhcc-CCCcEEEEeC---CCcccC
Q 042102 207 CSL-------TEE-----TQHIVNRQVINAL-GPKGVLINIG---RGLLVD 241 (317)
Q Consensus 207 lp~-------~~~-----t~~li~~~~l~~m-k~gavlVN~~---rg~~vd 241 (317)
.=. .++ ....++++.++.+ ||+++|.-+. ||.=|+
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~ 294 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVT 294 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBC
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccC
Confidence 221 011 1345789999999 9999999986 354444
No 249
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.60 E-value=0.011 Score=54.69 Aligned_cols=92 Identities=9% Similarity=0.065 Sum_probs=69.1
Q ss_pred cccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCC--------------CC--ccccCCHHHhcccCCEEEEe
Q 042102 145 KFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPN--------------LN--YKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~--------------~~--~~~~~~l~el~~~aDvV~~~ 206 (317)
.+.|.+|++||=| ++.++.+..+..+|++|.+..|..-.. .+ .....++++.++++|+|..-
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 4889999999986 999999999999999998887643211 11 22357899999999999873
Q ss_pred ccC-----C---hh-----hhccccHHHHhcc-CCCcEEEEeCC
Q 042102 207 CSL-----T---EE-----TQHIVNRQVINAL-GPKGVLINIGR 236 (317)
Q Consensus 207 lp~-----~---~~-----t~~li~~~~l~~m-k~gavlVN~~r 236 (317)
.=. . .+ ....++++.++.+ ||+++|.-+.-
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 321 0 01 1245789999999 99999999854
No 250
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.60 E-value=0.0025 Score=55.41 Aligned_cols=92 Identities=17% Similarity=0.020 Sum_probs=61.9
Q ss_pred ccCCeEEEEe-cChhHHHHHHHHhhCC-CEEEEeCCCCCCCC-----Cc-------cccCCHHHhcccCCEEEEeccCCh
Q 042102 146 FTGKSVGILG-MGRIGTAIAKRAEAFD-CIIGYNSRTEKPNL-----NY-------KYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~-----~~-------~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
...++|.|.| .|.||+.+++.|...| ++|.+.+|+..... .. ....+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 3457899999 6999999999999999 89999888754321 11 112246678899999998876543
Q ss_pred hhhccccHHHHhccCC--CcEEEEeCCCcc
Q 042102 212 ETQHIVNRQVINALGP--KGVLINIGRGLL 239 (317)
Q Consensus 212 ~t~~li~~~~l~~mk~--gavlVN~~rg~~ 239 (317)
... ..+..++.|++ ...||++|....
T Consensus 101 ~~~--~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LDI--QANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HHH--HHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hhH--HHHHHHHHHHHcCCCEEEEEeccee
Confidence 211 12345555543 246899987443
No 251
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.57 E-value=0.0053 Score=52.58 Aligned_cols=86 Identities=17% Similarity=0.172 Sum_probs=59.3
Q ss_pred CeEEEEe-cChhHHHHHHHHh-hCCCEEEEeCCCCC-CC-------CCcc-------ccCCHHHhcccCCEEEEeccCCh
Q 042102 149 KSVGILG-MGRIGTAIAKRAE-AFDCIIGYNSRTEK-PN-------LNYK-------YYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~-~~G~~V~~~~~~~~-~~-------~~~~-------~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
|++.|.| .|.||+.+++.|. ..|++|.+.+|++. .. .... ...++.++++.+|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 5799999 5999999999999 89999999888755 21 1111 11345678899999998876531
Q ss_pred hhhccccHHHHhccCC-C-cEEEEeCCCc
Q 042102 212 ETQHIVNRQVINALGP-K-GVLINIGRGL 238 (317)
Q Consensus 212 ~t~~li~~~~l~~mk~-g-avlVN~~rg~ 238 (317)
.. .+..++.|++ | ..||++|...
T Consensus 86 -~~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 86 -SD---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp -HH---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred -hh---HHHHHHHHHhcCCCeEEEEeece
Confidence 11 4455555643 2 3688887544
No 252
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.57 E-value=0.0033 Score=58.26 Aligned_cols=64 Identities=14% Similarity=0.236 Sum_probs=46.0
Q ss_pred CeEEEEecChhHHH-HHH-HHh-hCCCEEE-EeCCCCCCC------CCccccCCHHHhccc--CCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTA-IAK-RAE-AFDCIIG-YNSRTEKPN------LNYKYYPNLIDLASN--CQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~-~l~-~~G~~V~-~~~~~~~~~------~~~~~~~~l~el~~~--aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+. .+. .+. .-++++. ++|+++... .+...+.+++++++. .|+|++++|....
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSH 78 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHH
Confidence 47999999999996 455 334 3467765 788876432 123346789999886 8999999996543
No 253
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.56 E-value=0.0045 Score=57.63 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=67.0
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCC------CC----ccccCCHHHhcc--cCCEEEEeccCChhhh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPN------LN----YKYYPNLIDLAS--NCQILVVACSLTEETQ 214 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~------~~----~~~~~~l~el~~--~aDvV~~~lp~~~~t~ 214 (317)
.+|||||+|.||+..++.++.. ++++ .+++++.... .+ ...+.+++++++ ++|+|++++|.....
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~- 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV- 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH-
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH-
Confidence 4899999999999999988875 5665 5778765421 12 234578999986 599999999954332
Q ss_pred ccccHHHHhccCCCcEEEEeC--CCcccCHHHHHHHHHhCCce
Q 042102 215 HIVNRQVINALGPKGVLINIG--RGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~--rg~~vd~~aL~~al~~g~i~ 255 (317)
+-....++.|.-++.-. --.+-+.+.|.++.++..+.
T Consensus 86 ----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 86 ----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 22234466665443321 12223456788888777665
No 254
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.56 E-value=0.0049 Score=56.53 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=59.2
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---------------C--ccccCCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---------------N--YKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
++|+|||.|.+|..++..+...|. +|..+|...+... . .....+. +.++.||+|+++.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999998886 8989997653210 0 1112456 7789999999997532
Q ss_pred hh-----------hhcccc--HHHHhccCCCcEEEEeCCCcccCHH
Q 042102 211 EE-----------TQHIVN--RQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 211 ~~-----------t~~li~--~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
.. +..++. .+.+....|++++++++ ..+|.-
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t--NPv~~~ 125 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN--NPLDAM 125 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC--SSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC--CchHHH
Confidence 21 111110 11233335899999974 345443
No 255
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.55 E-value=0.0044 Score=57.07 Aligned_cols=93 Identities=13% Similarity=0.226 Sum_probs=60.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC---------------Ccccc-CCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL---------------NYKYY-PNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~---------------~~~~~-~~l~el~~~aDvV~~~lp~~ 210 (317)
++|+|+|.|.||..+|..+...|. +|..+|..+.... ..... .+..+.++.||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999987776 8999998764311 01111 24568899999999986543
Q ss_pred hh---hh-ccc--c-------HHHHhccCCCcEEEEeCCCcccCHH
Q 042102 211 EE---TQ-HIV--N-------RQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 211 ~~---t~-~li--~-------~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
.. ++ .++ | .+.+....|++++++++ .++|.-
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 124 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDVM 124 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHHH
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhHH
Confidence 21 11 111 1 12334456899999997 455443
No 256
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.55 E-value=0.0018 Score=56.50 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=41.8
Q ss_pred CeEEEEecChhHHHHHHH--HhhCCCEE-EEeCCCCCCCC----Cc--cccCCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKR--AEAFDCII-GYNSRTEKPNL----NY--KYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~--l~~~G~~V-~~~~~~~~~~~----~~--~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
++++|||.|++|+.+++. ....|+++ .++|.++.... +. ....++++++++.|++++++|..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCch
Confidence 479999999999999994 44567875 46776654321 11 12467888887779999999953
No 257
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.53 E-value=0.0026 Score=58.97 Aligned_cols=96 Identities=20% Similarity=0.210 Sum_probs=61.3
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------------CccccCCHHHhcccCCEEEEeccC
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------------NYKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
-.+++|+|||.|.||..+|..+...|. ++..+|....... ......+..+.++.||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356799999999999999999987776 8999998643210 111123346789999999998643
Q ss_pred Chh---hh-ccc--c-------HHHHhccCCCcEEEEeCCCcccCHH
Q 042102 210 TEE---TQ-HIV--N-------RQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 210 ~~~---t~-~li--~-------~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
... ++ .++ | .+.+....|++++++++ .++|.-
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi~ 131 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDIL 131 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS--SSHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHHH
Confidence 211 12 122 1 12334456899999996 455543
No 258
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.53 E-value=0.0019 Score=59.82 Aligned_cols=64 Identities=19% Similarity=0.264 Sum_probs=49.3
Q ss_pred CeEEEEecChhHHHHHHHHh-h-CCCEEE-EeCCCCCCC------CC--ccccCCHHHhccc--CCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAE-A-FDCIIG-YNSRTEKPN------LN--YKYYPNLIDLASN--CQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~-~-~G~~V~-~~~~~~~~~------~~--~~~~~~l~el~~~--aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+..++.++ . -++++. ++|+++... .+ ...+.+++++++. .|+|++++|....
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 79 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAH 79 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhH
Confidence 47999999999999999998 5 467765 778765431 12 3456789999876 9999999996543
No 259
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.52 E-value=0.014 Score=53.20 Aligned_cols=92 Identities=18% Similarity=0.204 Sum_probs=69.1
Q ss_pred cccCCeEEEEec---ChhHHHHHHHHhhC-CCEEEEeCCCCCCC-------CC--ccccCCHHHhcccCCEEEEeccCCh
Q 042102 145 KFTGKSVGILGM---GRIGTAIAKRAEAF-DCIIGYNSRTEKPN-------LN--YKYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 145 ~l~g~~vgIiG~---G~iG~~~a~~l~~~-G~~V~~~~~~~~~~-------~~--~~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
.+.|.+|+++|= |++.++.+..+..+ |++|.+..+..-.. .+ .....+++++++++|+|..-.=-.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 378999999998 59999999999999 99998887643211 12 2234689999999999877543321
Q ss_pred ------h-h----hccccHHHHhccCCCcEEEEeCC
Q 042102 212 ------E-T----QHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 212 ------~-t----~~li~~~~l~~mk~gavlVN~~r 236 (317)
+ . ...++++.++.+||+++|.-+.-
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCC
Confidence 1 1 24578899999999999988863
No 260
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.49 E-value=0.006 Score=55.64 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=62.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC---------------C--ccccCCHHHhcccCCEEEEeccC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL---------------N--YKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
++|+|+|.|.+|..+|..|...|. +|..+|+.++... . .....+ .+.++.||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 489999999999999999987777 8999998653210 0 011235 7889999999998654
Q ss_pred Chh---hh-ccc--c-------HHHHhccCCCcEEEEeCCCcccCHHH
Q 042102 210 TEE---TQ-HIV--N-------RQVINALGPKGVLINIGRGLLVDEHE 244 (317)
Q Consensus 210 ~~~---t~-~li--~-------~~~l~~mk~gavlVN~~rg~~vd~~a 244 (317)
... ++ .++ | .+.+....|++++++++ .++|.-.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t 125 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMT 125 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHH
Confidence 311 11 111 1 12344457899999997 5566543
No 261
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.49 E-value=0.0027 Score=59.25 Aligned_cols=65 Identities=18% Similarity=0.284 Sum_probs=50.1
Q ss_pred CCeEEEEecChhHHHHHHHHh-h-CCCEEE-EeCCCCCCC------CC--ccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 148 GKSVGILGMGRIGTAIAKRAE-A-FDCIIG-YNSRTEKPN------LN--YKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~-~-~G~~V~-~~~~~~~~~------~~--~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
..+|||||+|.||+..++.++ . -++++. ++|+++... .+ ...+.+++++++ +.|+|++++|....
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 458999999999999999987 4 367765 788876542 12 345678999987 48999999996543
No 262
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.48 E-value=0.0015 Score=61.20 Aligned_cols=63 Identities=19% Similarity=0.233 Sum_probs=45.6
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----------CCccccCCHHHhcccCCEEEEeccCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----------LNYKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
+.++|+|+|.|.+|+.+++.|+. ..+|.+.+++.+.. .+.....++.++++++|+|+.++|..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 44589999999999999999975 46788777654321 01111234778899999999999854
No 263
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.46 E-value=0.0091 Score=55.18 Aligned_cols=90 Identities=16% Similarity=0.240 Sum_probs=59.4
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---------------Ccc--ccCCHHHhcccCCEEEEec
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---------------NYK--YYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~~~--~~~~l~el~~~aDvV~~~l 207 (317)
...++|+|||.|.+|..+|..+...|. +|..+|..++... ... ...+. +.++.||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 346799999999999999999988787 9999998764310 111 12344 7899999999986
Q ss_pred cCC--hh-hhc-cc--cH-------HHHhccCCCcEEEEeCC
Q 042102 208 SLT--EE-TQH-IV--NR-------QVINALGPKGVLINIGR 236 (317)
Q Consensus 208 p~~--~~-t~~-li--~~-------~~l~~mk~gavlVN~~r 236 (317)
+.. +. ++. ++ |. +.+....|++++++++.
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 432 11 111 11 11 12333458999999974
No 264
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.46 E-value=0.0033 Score=58.80 Aligned_cols=86 Identities=22% Similarity=0.309 Sum_probs=62.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccc---cCC---HHHhcccCCEEEEeccCChhhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKY---YPN---LIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~---~~~---l~el~~~aDvV~~~lp~~~~t~ 214 (317)
.|.+|.|+|.|.||..+++.++.+|++|++.+++.... .+... ..+ +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 68899999999999999999999999999888765431 22211 122 33344568999888764322
Q ss_pred ccccHHHHhccCCCcEEEEeCCC
Q 042102 215 HIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~rg 237 (317)
-+..++.|+++..+|+++..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 24567888999999998753
No 265
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.46 E-value=0.0075 Score=55.51 Aligned_cols=110 Identities=20% Similarity=0.240 Sum_probs=65.5
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCCC--------------ccccCCHHHhcccCCEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNLN--------------YKYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~--------------~~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
.++|+|||.|.+|..++..+...|. +|..+|...+...+ .....+-.+.++.||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999988887 89999976543210 0011123567999999999987532
Q ss_pred hhhcc-----c--c-------HHHHhccCCCcEEEEeCCCcccCHHH--HHHH--HHhCCceEE--Eee
Q 042102 212 ETQHI-----V--N-------RQVINALGPKGVLINIGRGLLVDEHE--LVSA--LLQGRLGGA--GLD 260 (317)
Q Consensus 212 ~t~~l-----i--~-------~~~l~~mk~gavlVN~~rg~~vd~~a--L~~a--l~~g~i~ga--~lD 260 (317)
. .+. + | .+.+....|+++++++ ...+|.-. +.+. +...++.|. .||
T Consensus 87 k-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 87 K-PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred C-CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 1 111 0 1 1122333689999997 34554433 3232 234466665 256
No 266
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.46 E-value=0.0055 Score=59.17 Aligned_cols=97 Identities=21% Similarity=0.288 Sum_probs=70.0
Q ss_pred ccccCCeEEEEecC----------hhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccccCCHHHhcccCCEEEEecc
Q 042102 144 TKFTGKSVGILGMG----------RIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 144 ~~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDvV~~~lp 208 (317)
..+.|++|+|+|+. .-...+++.|...|++|.+||+..... .+.....++++.++.+|.|++++.
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~ 397 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVTE 397 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECSC
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEeeC
Confidence 45789999999997 668899999999999999999875321 123345678999999999999987
Q ss_pred CChhhhccccHHHH-hccCCCcEEEEeCCCcccCHHHH
Q 042102 209 LTEETQHIVNRQVI-NALGPKGVLINIGRGLLVDEHEL 245 (317)
Q Consensus 209 ~~~~t~~li~~~~l-~~mk~gavlVN~~rg~~vd~~aL 245 (317)
..+ -+. ++-+.+ +.|+ +.+++|+ |+ +.|.+.+
T Consensus 398 ~~~-f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 398 WDA-FRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CTT-TTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CHH-hhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 654 222 454444 4465 5678885 54 3555433
No 267
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.44 E-value=0.0096 Score=57.95 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=69.5
Q ss_pred cccCCeEEEEecC----------hhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhh
Q 042102 145 KFTGKSVGILGMG----------RIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 145 ~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~ 214 (317)
.+.|++|+|+|+- .-...+++.|...|++|.+||+............++++.++.+|.|++++...+ .+
T Consensus 350 ~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~~-f~ 428 (478)
T 3g79_A 350 KMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVLAGHSA-YS 428 (478)
T ss_dssp CSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEECSCCHH-HH
T ss_pred CCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEEecCCHH-HH
Confidence 4689999999974 236889999999999999999876533223345688999999999999987543 23
Q ss_pred ccccHHH-HhccC-CCcEEEEeCCCcccCHHH
Q 042102 215 HIVNRQV-INALG-PKGVLINIGRGLLVDEHE 244 (317)
Q Consensus 215 ~li~~~~-l~~mk-~gavlVN~~rg~~vd~~a 244 (317)
. ++.+. .+.|+ ++.+++|+ |+- .|.+.
T Consensus 429 ~-~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~ 457 (478)
T 3g79_A 429 S-LKADWAKKVSAKANPVIIDG-RNV-IEPDE 457 (478)
T ss_dssp S-CCHHHHHHHHCCSSCEEEES-SSC-SCHHH
T ss_pred h-hhHHHHHHHhccCCCEEEEC-CCC-CCHHH
Confidence 2 45444 44677 47899994 554 45433
No 268
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.43 E-value=0.0054 Score=56.22 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=73.1
Q ss_pred ccccCCeEEEE-ec-ChhHHHHHHHHhhCCCEEE-EeCCCCC--CCCCccccCCHHHhcc--cCCEEEEeccCChhhhcc
Q 042102 144 TKFTGKSVGIL-GM-GRIGTAIAKRAEAFDCIIG-YNSRTEK--PNLNYKYYPNLIDLAS--NCQILVVACSLTEETQHI 216 (317)
Q Consensus 144 ~~l~g~~vgIi-G~-G~iG~~~a~~l~~~G~~V~-~~~~~~~--~~~~~~~~~~l~el~~--~aDvV~~~lp~~~~t~~l 216 (317)
.-+..++++|| |+ |+.|+.+++.++..|++++ ..++... ...+...+.+++|+.+ ..|++++++|.... ...
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~~~~-~~~ 87 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFA-AAA 87 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHH-HHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCHHHH-HHH
Confidence 44677899999 99 9999999999999999844 5565431 2234555678999988 89999999995432 222
Q ss_pred ccHHHHhccCCC-cEEEEeCCCccc-CHHHHHHHHHhC-Cce
Q 042102 217 VNRQVINALGPK-GVLINIGRGLLV-DEHELVSALLQG-RLG 255 (317)
Q Consensus 217 i~~~~l~~mk~g-avlVN~~rg~~v-d~~aL~~al~~g-~i~ 255 (317)
+. +.. +.| ..+|+.+.|-.. ++..+.+..++. .+.
T Consensus 88 ~~-e~i---~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 88 IN-EAI---DAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HH-HHH---HTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HH-HHH---HCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 32 222 223 234666666432 445888888887 665
No 269
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.41 E-value=0.0022 Score=59.86 Aligned_cols=64 Identities=14% Similarity=0.091 Sum_probs=47.8
Q ss_pred CCeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCC-------CCccccCCHHHhcccC--CEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPN-------LNYKYYPNLIDLASNC--QILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~-------~~~~~~~~l~el~~~a--DvV~~~lp~~~ 211 (317)
..+|||||+|.||+. .++.++.. ++++. ++|+++... .....+.+++++++.. |+|++++|...
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 80 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQL 80 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHH
Confidence 358999999999995 88888776 67765 778865432 1223467899999854 99999999543
No 270
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.40 E-value=0.0039 Score=57.58 Aligned_cols=63 Identities=11% Similarity=0.136 Sum_probs=48.6
Q ss_pred cCCeEEEEecChhHH-HHHHHHhhC-CCEE-EEeCCCCCCCCCccccCCHHHhccc---CCEEEEeccCC
Q 042102 147 TGKSVGILGMGRIGT-AIAKRAEAF-DCII-GYNSRTEKPNLNYKYYPNLIDLASN---CQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~-~~a~~l~~~-G~~V-~~~~~~~~~~~~~~~~~~l~el~~~---aDvV~~~lp~~ 210 (317)
...+|||||+|.||+ ..++.++.. +++| .++|++.+. .+...+.+++++++. .|+|++++|..
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-~g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-EGVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-TTSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-cCCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 346899999999998 688888776 6776 467776543 344567899999865 89999999953
No 271
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.39 E-value=0.005 Score=52.76 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=57.8
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCCC----cc-------ccCCHHHhcccCCEEEEeccCChhhhcc
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNLN----YK-------YYPNLIDLASNCQILVVACSLTEETQHI 216 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~----~~-------~~~~l~el~~~aDvV~~~lp~~~~t~~l 216 (317)
++|.|.| .|.||+.+++.|...|.+|.+.+|+...... .. ...++.++++.+|+|+.+.........+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~ 84 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNPDI 84 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC------C
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCChhH
Confidence 6899999 5999999999999999999999987653211 11 1224667889999998876544221111
Q ss_pred c------cHHHHhccCC-C-cEEEEeCCCcc
Q 042102 217 V------NRQVINALGP-K-GVLINIGRGLL 239 (317)
Q Consensus 217 i------~~~~l~~mk~-g-avlVN~~rg~~ 239 (317)
+ ....++.+++ + ..||.+|....
T Consensus 85 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 115 (227)
T 3dhn_A 85 YDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115 (227)
T ss_dssp CSHHHHHHHHHHHHHHHTTCSEEEEECCSTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCChhh
Confidence 1 1223333332 2 36888877543
No 272
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.39 E-value=0.023 Score=52.27 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=71.8
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEec
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~l 207 (317)
.+.|.+|+++|= +++.++.+..+..+|++|.+..+..-... + .....++++.++++|+|..-.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 378999999997 89999999999999999988876432111 1 223578999999999998743
Q ss_pred cC-------Chh-----hhccccHHHHhccCCCcEEEEeC---CCcccC
Q 042102 208 SL-------TEE-----TQHIVNRQVINALGPKGVLINIG---RGLLVD 241 (317)
Q Consensus 208 p~-------~~~-----t~~li~~~~l~~mk~gavlVN~~---rg~~vd 241 (317)
=. .++ ....++++.++.+||+++|.-+. ||.=|+
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~ 280 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVT 280 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBC
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccC
Confidence 21 111 12457899999999999999986 354444
No 273
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.36 E-value=0.041 Score=50.72 Aligned_cols=92 Identities=13% Similarity=0.119 Sum_probs=67.5
Q ss_pred cccCCeEEEEecC-hhHHHHHHHHhhCCCEEEEeCCCCCCCC----------------CccccCCHHHhcccCCEEEEec
Q 042102 145 KFTGKSVGILGMG-RIGTAIAKRAEAFDCIIGYNSRTEKPNL----------------NYKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 145 ~l~g~~vgIiG~G-~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~el~~~aDvV~~~l 207 (317)
.+.|.+|++||=| ++.++.+..+..||++|.+..+..-... ......+++++++++|+|..-+
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 3789999999985 4888888888899999988876432110 1233578999999999998843
Q ss_pred ----cCChh--------hhccccHHHHhccCCCcEEEEeCC
Q 042102 208 ----SLTEE--------TQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 208 ----p~~~~--------t~~li~~~~l~~mk~gavlVN~~r 236 (317)
....+ ....++++.++.+|++++|.-+.-
T Consensus 232 w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP 272 (321)
T 1oth_A 232 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLP 272 (321)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred cccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCC
Confidence 11111 114568999999999999999863
No 274
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.32 E-value=0.013 Score=54.09 Aligned_cols=94 Identities=17% Similarity=0.207 Sum_probs=61.3
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---------------Ccc-c-cCCHHHhcccCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---------------NYK-Y-YPNLIDLASNCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~~~-~-~~~l~el~~~aDvV~~~lp 208 (317)
..++|+|||.|.+|..+|..+...|+ +|..+|..+.... ... . ..+ .+.++.||+|+++.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence 35799999999999999999987776 9999998764310 111 1 123 478999999999864
Q ss_pred CC--hh-hhc-cc--cH-------HHHhccCCCcEEEEeCCCcccCHH
Q 042102 209 LT--EE-TQH-IV--NR-------QVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 209 ~~--~~-t~~-li--~~-------~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
.. +. ++. ++ |. +.+....|++++++++ .++|.-
T Consensus 83 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 128 (321)
T 3p7m_A 83 VPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIM 128 (321)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred cCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHH
Confidence 32 11 111 11 11 1233345899999994 555544
No 275
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.32 E-value=0.0089 Score=55.32 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=69.6
Q ss_pred CeEEEEecChhHHHHHHHHhh---------CCCEEE-EeCCCCCCCCC-------------ccccC--CHHHhcc--cCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEA---------FDCIIG-YNSRTEKPNLN-------------YKYYP--NLIDLAS--NCQ 201 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~---------~G~~V~-~~~~~~~~~~~-------------~~~~~--~l~el~~--~aD 201 (317)
.+|||+|+|.||+.+++.+.. .+.+|. +++++...... ...+. ++++++. +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 389999999999999999875 467765 56665322110 11223 8888885 589
Q ss_pred EEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc-CHHHHHHHHHhCCce
Q 042102 202 ILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV-DEHELVSALLQGRLG 255 (317)
Q Consensus 202 vV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v-d~~aL~~al~~g~i~ 255 (317)
+|+.++|....... .-+-....++.|.-+|...-+.+. +.+.|.++.++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999996543221 123345667888887776555543 566788877777765
No 276
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.32 E-value=0.0022 Score=59.53 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=60.8
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~lp 208 (317)
..++|+|||.|.||..+|..+...|+ +|..+|...+... . .....+.++ ++.||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999987787 8999997643210 0 011235555 899999999854
Q ss_pred CChh---hh-ccc--c-------HHHHhccCCCcEEEEeCCCcccCH
Q 042102 209 LTEE---TQ-HIV--N-------RQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 209 ~~~~---t~-~li--~-------~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
.... ++ .++ | .+.+....|++++++++ ..+|.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt--NPvdi 143 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP--ELGTD 143 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC--CccHH
Confidence 3211 11 111 1 12334457899999987 34443
No 277
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.31 E-value=0.004 Score=60.65 Aligned_cols=110 Identities=12% Similarity=0.163 Sum_probs=69.6
Q ss_pred CCeEEEEecChhH--HHHHHHHh---hC-CCEEEEeCCCCCCC---------------CC--ccccCCHHHhcccCCEEE
Q 042102 148 GKSVGILGMGRIG--TAIAKRAE---AF-DCIIGYNSRTEKPN---------------LN--YKYYPNLIDLASNCQILV 204 (317)
Q Consensus 148 g~~vgIiG~G~iG--~~~a~~l~---~~-G~~V~~~~~~~~~~---------------~~--~~~~~~l~el~~~aDvV~ 204 (317)
.++|+|||.|.+| .++|..+. ++ |.+|..+|+..+.. .. .....++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4689999999975 55566553 34 78999999876421 01 112357888899999999
Q ss_pred EeccCCh---------------------hhh-------cccc-----------HHHHhccCCCcEEEEeCCCcccCHHHH
Q 042102 205 VACSLTE---------------------ETQ-------HIVN-----------RQVINALGPKGVLINIGRGLLVDEHEL 245 (317)
Q Consensus 205 ~~lp~~~---------------------~t~-------~li~-----------~~~l~~mk~gavlVN~~rg~~vd~~aL 245 (317)
++.|... +|. |++- .+.+....|++++||++-.--+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997411 110 1110 123444568999999987554445555
Q ss_pred HHHHHhCCceEEE
Q 042102 246 VSALLQGRLGGAG 258 (317)
Q Consensus 246 ~~al~~g~i~ga~ 258 (317)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 44 5555666653
No 278
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.30 E-value=0.0025 Score=61.60 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=47.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CC-cc----cc---CCHHHhcccCCEEEEeccCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LN-YK----YY---PNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~-~~----~~---~~l~el~~~aDvV~~~lp~~ 210 (317)
.+++|+|+|.|.||+.+++.|...|.+|.+++|+.... .+ .. .. .++.++++++|+|+.+.|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 36899999999999999999999999999988864321 01 10 11 24557788999999999864
No 279
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.29 E-value=0.0045 Score=53.61 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=49.7
Q ss_pred cccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCc-c-----ccCCHHHhcccCCEEEEeccCC
Q 042102 143 TTKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNY-K-----YYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 143 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~-~-----~~~~l~el~~~aDvV~~~lp~~ 210 (317)
...+.|++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+. . ...++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 45689999999998 9999999999999999999998875432 111 1 1145678889999999887654
No 280
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.25 E-value=0.017 Score=54.63 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=66.1
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh---
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN--- 223 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~--- 223 (317)
...++-|+|.|.+|+.+++.++.+|++|.++|..+.... .+-+..+|-++...| .+ .+.. +.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~--------~~~fp~a~~~~~~~p--~~---~~~~--~~~~~ 267 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT--------TARFPTADEVVVDWP--HR---YLAA--QAEAG 267 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC--------TTTCSSSSEEEESCH--HH---HHHH--HHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc--------cccCCCceEEEeCCh--HH---HHHh--hcccc
Confidence 345899999999999999999999999999987654221 122345665554444 11 1111 11
Q ss_pred ccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 224 ALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.+.+++.+|=+.++.-.|...|..+|+++...
T Consensus 268 ~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~ 299 (386)
T 2we8_A 268 AIDARTVVCVLTHDPKFDVPLLEVALRLPDIA 299 (386)
T ss_dssp CCCTTCEEEECCCCHHHHHHHHHHHTTSSCCS
T ss_pred CCCCCcEEEEEECChHhHHHHHHHHhcCCCCC
Confidence 15678888888899889999999999887333
No 281
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.25 E-value=0.004 Score=58.07 Aligned_cols=64 Identities=13% Similarity=0.130 Sum_probs=48.3
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCCC----CccccCCHHHhccc--CCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPNL----NYKYYPNLIDLASN--CQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~~----~~~~~~~l~el~~~--aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+. .+..++.. +++|. ++|+++.... +...+.+++++++. .|+|++++|....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTH 78 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHH
Confidence 58999999999997 67777765 67764 7787764321 23346789999987 8999999996543
No 282
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.23 E-value=0.0046 Score=57.40 Aligned_cols=64 Identities=14% Similarity=0.112 Sum_probs=48.6
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCC----CCccccCCHHHhccc--CCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPN----LNYKYYPNLIDLASN--CQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~----~~~~~~~~l~el~~~--aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+. .+..++.. +++|. ++|+++... .+...+.+++++++. .|+|++++|....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 80 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTH 80 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHH
Confidence 58999999999997 77777766 67764 778765421 133456789999876 9999999997654
No 283
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.23 E-value=0.011 Score=54.15 Aligned_cols=92 Identities=17% Similarity=0.113 Sum_probs=67.5
Q ss_pred cccCCeEEEEecC---hhHHHHHHHHhhCCCEEEEeCCCCCCCC----------C--ccccCCHHHhcccCCEEEEeccC
Q 042102 145 KFTGKSVGILGMG---RIGTAIAKRAEAFDCIIGYNSRTEKPNL----------N--YKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 145 ~l~g~~vgIiG~G---~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
.+.|.+|++||=| ++.++.+..+..||++|.+..+..-... + .....+++++++++|+|..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 3789999999984 8999999999999999988876432111 2 22346899999999998774321
Q ss_pred C------hhh-----hccccHHHHhccCCCcEEEEeCC
Q 042102 210 T------EET-----QHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 210 ~------~~t-----~~li~~~~l~~mk~gavlVN~~r 236 (317)
. ++- ...++++.++.+||+++|.-+.-
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 1 111 23467888888899999888763
No 284
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.23 E-value=0.0045 Score=59.38 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=63.2
Q ss_pred CCeEEEEecChhHH-HHHHHHhhC-CCEE-EEeCCCCCCC------CCcc-----ccCCHHHhcc--cCCEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGT-AIAKRAEAF-DCII-GYNSRTEKPN------LNYK-----YYPNLIDLAS--NCQILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~-~~a~~l~~~-G~~V-~~~~~~~~~~------~~~~-----~~~~l~el~~--~aDvV~~~lp~~~ 211 (317)
-.+|||||+|.||+ ..++.++.. ++++ .++|++.... .+.. .+.+++++++ +.|+|++++|...
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 35899999999997 899988765 5675 5788765421 1221 3678999987 7999999999654
Q ss_pred hhhccccHHHHhccCCCc-EEEEe-CCCcccCHHHHHHHHHhCCce
Q 042102 212 ETQHIVNRQVINALGPKG-VLINI-GRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 212 ~t~~li~~~~l~~mk~ga-vlVN~-~rg~~vd~~aL~~al~~g~i~ 255 (317)
... -....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 163 h~~-----~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 203 (433)
T 1h6d_A 163 HAE-----FAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 203 (433)
T ss_dssp HHH-----HHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred HHH-----HHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCe
Confidence 322 2223344554 44432 111222344566665554443
No 285
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.22 E-value=0.0051 Score=56.92 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=61.1
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC---------------CccccCCHHHhcccCCEEEEeccC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL---------------NYKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~---------------~~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
..++|+|||.|.+|..+|..+...|. +|..+|...+... ......+..+.++.||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35689999999999999999987776 8999998643210 011112234678999999998753
Q ss_pred Chh---hh-ccc--c-------HHHHhccCCCcEEEEeCCCcccCHH
Q 042102 210 TEE---TQ-HIV--N-------RQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 210 ~~~---t~-~li--~-------~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
... ++ .++ | .+.+....|++++++++- ++|.-
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN--Pvd~~ 128 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN--PVDIL 128 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS--SHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC--hHHHH
Confidence 211 11 111 1 122334568999999973 45443
No 286
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.22 E-value=0.0076 Score=55.72 Aligned_cols=87 Identities=20% Similarity=0.302 Sum_probs=61.8
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc-cCCHHHhcccCCEEEEeccCChhhhccccHH
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY-YPNLIDLASNCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~-~~~l~el~~~aDvV~~~lp~~~~t~~li~~~ 220 (317)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++. .+... ..+.+++.+..|+|+-+...... -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHH
Confidence 57899999999999999999999999999988776542 12111 12333444468888877664321 245
Q ss_pred HHhccCCCcEEEEeCCCc
Q 042102 221 VINALGPKGVLINIGRGL 238 (317)
Q Consensus 221 ~l~~mk~gavlVN~~rg~ 238 (317)
.++.++++..++.++...
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 677888888888887543
No 287
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.22 E-value=0.0085 Score=54.84 Aligned_cols=63 Identities=10% Similarity=0.151 Sum_probs=48.7
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEE-EEeCCCCCCC------CCccccCCHHHhc----------ccCCEEEEeccCC
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCII-GYNSRTEKPN------LNYKYYPNLIDLA----------SNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V-~~~~~~~~~~------~~~~~~~~l~el~----------~~aDvV~~~lp~~ 210 (317)
.++||||+ |.||+..++.++..+.++ .++|+++... .....+.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 789999999999889875 5778766532 1223457888887 6799999999965
Q ss_pred h
Q 042102 211 E 211 (317)
Q Consensus 211 ~ 211 (317)
.
T Consensus 84 ~ 84 (312)
T 3o9z_A 84 L 84 (312)
T ss_dssp G
T ss_pred h
Confidence 4
No 288
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.21 E-value=0.016 Score=55.58 Aligned_cols=87 Identities=8% Similarity=0.175 Sum_probs=65.5
Q ss_pred ccCCeEEEEecC----------hhHHHHHHHHhhC-CCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhh
Q 042102 146 FTGKSVGILGMG----------RIGTAIAKRAEAF-DCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 146 l~g~~vgIiG~G----------~iG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~ 214 (317)
+.|++|+|+|+. .-...+++.|... |++|.+||+..... ....++++.++.+|.|+++....+ -+
T Consensus 313 ~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~---~~~~~~~~~~~~ad~vvi~t~~~~-f~ 388 (431)
T 3ojo_A 313 LSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD---FVEHDMSHAVKDASLVLILSDHSE-FK 388 (431)
T ss_dssp SSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT---TBCSTTHHHHTTCSEEEECSCCGG-GT
T ss_pred cCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc---cccCCHHHHHhCCCEEEEecCCHH-Hh
Confidence 589999999974 3468899999999 99999999876543 234678899999999999987553 22
Q ss_pred ccccHHHHhccCCCcEEEEeCCCcc
Q 042102 215 HIVNRQVINALGPKGVLINIGRGLL 239 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~rg~~ 239 (317)
. ++.+.++.|+ +.+++|+ |+-+
T Consensus 389 ~-~d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 389 N-LSDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp S-CCGGGGTTCS-SCEEEES-SCCC
T ss_pred c-cCHHHHHhCC-CCEEEEC-CCCC
Confidence 2 3444556676 6788885 5443
No 289
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.18 E-value=0.0039 Score=58.14 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=48.6
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCC----CCccccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPN----LNYKYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~----~~~~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+. .+..++.. +++|. ++|+++... .+...+.+++++++ +.|+|++++|....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLH 78 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTH
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHH
Confidence 48999999999997 67777766 67764 677765331 13345678999988 78999999997654
No 290
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.17 E-value=0.073 Score=49.36 Aligned_cols=90 Identities=11% Similarity=0.068 Sum_probs=65.1
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEec
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~l 207 (317)
.+.|++|++||= +++.++.+..+..||++|.+..+..-... + .....+++ .++++|+|..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 488999999996 57888899999999999988876432211 1 22356788 999999998632
Q ss_pred --cC-----C-hh----h--hccccHHHHhccCCCcEEEEeC
Q 042102 208 --SL-----T-EE----T--QHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 208 --p~-----~-~~----t--~~li~~~~l~~mk~gavlVN~~ 235 (317)
.. . .+ . ...++++.++.+|++++|.-+.
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 11 0 11 1 1456888888899999998886
No 291
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.15 E-value=0.062 Score=51.64 Aligned_cols=157 Identities=14% Similarity=0.127 Sum_probs=105.5
Q ss_pred CcEEEeCCCCCcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCC-
Q 042102 94 GIRVANTPDVLTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDC- 172 (317)
Q Consensus 94 gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~- 172 (317)
.|+|.|..- .-+|=-+++.+++.+|-. ++.+...+|.|.|.|..|-.+|+.+...|.
T Consensus 187 ~ipvFnDD~---qGTA~V~lAgllnAlki~-------------------gk~l~d~riV~~GAGaAGigia~ll~~~G~~ 244 (487)
T 3nv9_A 187 DIPVWHDDQ---QGTASVTLAGLLNALKLV-------------------KKDIHECRMVFIGAGSSNTTCLRLIVTAGAD 244 (487)
T ss_dssp SSCEEETTT---HHHHHHHHHHHHHHHHHH-------------------TCCGGGCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred cCCcccccc---chHHHHHHHHHHHHHHHh-------------------CCChhhcEEEEECCCHHHHHHHHHHHHcCCC
Confidence 799999863 456667788888876643 456888999999999999999999999998
Q ss_pred --EEEEeCCCC----CCC-C----------------CccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhccCCCc
Q 042102 173 --IIGYNSRTE----KPN-L----------------NYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINALGPKG 229 (317)
Q Consensus 173 --~V~~~~~~~----~~~-~----------------~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 229 (317)
+++.+|+.. ... . ......+|.|+++.+|+++-.--. ..|.|.++.++.|.+.+
T Consensus 245 ~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~---~pg~ft~e~V~~Ma~~P 321 (487)
T 3nv9_A 245 PKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTP---GPGVVKAEWIKSMGEKP 321 (487)
T ss_dssp GGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCS---SCCCCCHHHHHTSCSSC
T ss_pred cccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEeccc---CCCCCCHHHHHhhcCCC
Confidence 688887642 110 0 000234799999999977655311 14789999999999999
Q ss_pred EEEEeCCCcccCHHHHHHHHHhCCceEEEeeCCCCCCCCCcccCCCCceEEcccCC
Q 042102 230 VLINIGRGLLVDEHELVSALLQGRLGGAGLDVFEHEPDVPEELIGLENVVLLPHVA 285 (317)
Q Consensus 230 vlVN~~rg~~vd~~aL~~al~~g~i~ga~lDV~~~EP~~~~~L~~~pnvi~tPH~a 285 (317)
++.-.|.... |-.-.++.+.|+..-| +...+.| -+..|+++-|-++
T Consensus 322 IIFaLSNPtp--Ei~pe~A~~~G~aIvA----TGrsd~P----nQ~NN~liFPGI~ 367 (487)
T 3nv9_A 322 IVFCCANPVP--EIYPYEAKEAGAYIVA----TGRGDFP----NQVNNSVGFPGIL 367 (487)
T ss_dssp EEEECCSSSC--SSCHHHHHHTTCSEEE----ESCTTSS----SBCCGGGTHHHHH
T ss_pred EEEECCCCCc--cCCHHHHHHhCCEEEE----ECCCCCc----ccCcceeEcchhh
Confidence 9999987554 2111223335663322 1111212 2456777777544
No 292
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.15 E-value=0.0058 Score=59.12 Aligned_cols=42 Identities=14% Similarity=0.130 Sum_probs=37.6
Q ss_pred ccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 140 FKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 140 ~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
+++.-+++|++|.|||.|.+|.+.++.|...|++|.++++..
T Consensus 4 ~P~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 4 LPIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp EEEEECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred eeeEEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 455667999999999999999999999999999999998753
No 293
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.14 E-value=0.0039 Score=57.45 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=48.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCC---CEE-EEeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD---CII-GYNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G---~~V-~~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~~ 212 (317)
.++||||+|.||+..++.++..+ +++ .+++++.... .+. ..+.+++++++ +.|+|++++|....
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 79 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQH 79 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 48999999999999999998664 454 5678765432 122 24678999987 69999999996543
No 294
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.12 E-value=0.027 Score=51.03 Aligned_cols=106 Identities=10% Similarity=0.049 Sum_probs=75.1
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC--CCCccccCCHHHhcccCCEEEEeccCCh----------h
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP--NLNYKYYPNLIDLASNCQILVVACSLTE----------E 212 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~--~~~~~~~~~l~el~~~aDvV~~~lp~~~----------~ 212 (317)
.+.|++|.|+|........++.|...|++|.+....... ..+.....++.+.++++|+|+...|... .
T Consensus 4 ~~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~ 83 (300)
T 2rir_A 4 MLTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSN 83 (300)
T ss_dssp CCCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCccccccccc
Confidence 367889999999999999999999999998876432211 1223334557788899999887444321 1
Q ss_pred hhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+...++++.++.++++.+++ ++ +|..++.+++.+..+.
T Consensus 84 ~~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 84 EEVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRK 121 (300)
T ss_dssp SCEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCC
T ss_pred CCccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCE
Confidence 23347889999999988877 33 2667766777777776
No 295
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.12 E-value=0.0092 Score=54.77 Aligned_cols=63 Identities=6% Similarity=0.111 Sum_probs=48.4
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEE-EEeCCCCCCC------CCccccCCHHHhc-----------ccCCEEEEeccC
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCII-GYNSRTEKPN------LNYKYYPNLIDLA-----------SNCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V-~~~~~~~~~~------~~~~~~~~l~el~-----------~~aDvV~~~lp~ 209 (317)
.++||||+ |.||+..++.++..|.++ .++|+++... .....+.++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 789999999999889875 5778765432 1223456888876 579999999996
Q ss_pred Ch
Q 042102 210 TE 211 (317)
Q Consensus 210 ~~ 211 (317)
..
T Consensus 84 ~~ 85 (318)
T 3oa2_A 84 YL 85 (318)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 296
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.07 E-value=0.0037 Score=56.50 Aligned_cols=42 Identities=14% Similarity=0.288 Sum_probs=37.3
Q ss_pred ccccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 140 FKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 140 ~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
+++...+.|++|.|||.|.+|...++.|...|++|.++++..
T Consensus 5 lpl~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 5 LQLAHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EEEEECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eeEEEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 455678999999999999999999999999999999988643
No 297
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.06 E-value=0.03 Score=51.91 Aligned_cols=96 Identities=9% Similarity=0.083 Sum_probs=69.1
Q ss_pred ccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEecc
Q 042102 146 FTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~lp 208 (317)
+.|++|++||= +++.++.+..+..||++|.+..|..-... + .....+++++++++|+|..-.=
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVW 256 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCc
Confidence 78999999996 57788888899999999988876432111 1 2235689999999999876432
Q ss_pred CC------hh-----hhccccHHHHhccCCCcEEEEeC---CCcccC
Q 042102 209 LT------EE-----TQHIVNRQVINALGPKGVLINIG---RGLLVD 241 (317)
Q Consensus 209 ~~------~~-----t~~li~~~~l~~mk~gavlVN~~---rg~~vd 241 (317)
.. ++ ....++++.++.+|++++|.-+. ||.=|+
T Consensus 257 ~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt 303 (340)
T 4ep1_A 257 MSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVT 303 (340)
T ss_dssp ------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBC
T ss_pred cCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeC
Confidence 11 01 12457899999999999999986 554443
No 298
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.06 E-value=0.027 Score=52.58 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=68.9
Q ss_pred cccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEe
Q 042102 145 KFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~ 206 (317)
.+.|.+|+++|=| ++.++.+..+..+|++|.+..+..-... + .....+++++++.+|+|..-
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 252 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD 252 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence 3789999999996 9999999999999999988876432111 1 22357899999999998774
Q ss_pred cc---CC--h-h-----hhccccHHHHhccC---CCcEEEEeCC
Q 042102 207 CS---LT--E-E-----TQHIVNRQVINALG---PKGVLINIGR 236 (317)
Q Consensus 207 lp---~~--~-~-----t~~li~~~~l~~mk---~gavlVN~~r 236 (317)
.= .. . + ....++++.++.+| ++++|.-+.-
T Consensus 253 ~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 253 VWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp CSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred ccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 32 01 1 0 12457899999999 9999999854
No 299
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.05 E-value=0.016 Score=54.23 Aligned_cols=83 Identities=12% Similarity=0.169 Sum_probs=53.4
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCC-CEEEEeCCCCCCCCCc-------c-------ccCCHHHhcccCCEEEEeccCC
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFD-CIIGYNSRTEKPNLNY-------K-------YYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~~~-------~-------~~~~l~el~~~aDvV~~~lp~~ 210 (317)
...+|||+| +|.+|+.+.+.|.... +++.+..........+ . ...+ ++.++.+|+|++|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 9999999999998765 4766554322111100 0 0112 45567899999999855
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
.. .+.....+.|+.+|+.+.
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSS
T ss_pred hH------HHHHHHHhCCCEEEECCc
Confidence 43 222222367899999874
No 300
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.04 E-value=0.0058 Score=58.38 Aligned_cols=62 Identities=18% Similarity=0.335 Sum_probs=46.3
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCcc---ccC---CHHHhcccCCEEEE
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYK---YYP---NLIDLASNCQILVV 205 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~---~~~---~l~el~~~aDvV~~ 205 (317)
.-+.|++|+|+|-|.+|+.+++.++.+|++|+++|+.+... .... .+. .+.++++++|+|+.
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 35689999999999999999999999999999998765432 1100 112 35566778998874
No 301
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.04 E-value=0.007 Score=58.19 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=69.8
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC---CCC----------------------------ccccC
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP---NLN----------------------------YKYYP 191 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~---~~~----------------------------~~~~~ 191 (317)
+.++.|+||.|=|+|++|+.+|+.|...|++|+..+.+... ..+ ....
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~- 308 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYL- 308 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEE-
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEe-
Confidence 35689999999999999999999999999998765422100 000 0000
Q ss_pred CHHHh-cccCCEEEEeccCChhhhccccHHHHhccCCC--cEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 192 NLIDL-ASNCQILVVACSLTEETQHIVNRQVINALGPK--GVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 192 ~l~el-~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~g--avlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+-+++ -..||+++-|. +.+.|+.+..+.++.+ .++++-+-+.+-.+ + .+.|.+..|.
T Consensus 309 ~~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl 368 (450)
T 4fcc_A 309 EGQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL 368 (450)
T ss_dssp ETCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE
T ss_pred cCcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE
Confidence 11111 23689877773 4567888888888754 46777777776443 3 3567777776
No 302
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.02 E-value=0.022 Score=52.43 Aligned_cols=96 Identities=15% Similarity=0.228 Sum_probs=61.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCC--CCCC---------------Ccc-ccCCHHHhcccCCEEEEec
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTE--KPNL---------------NYK-YYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~--~~~~---------------~~~-~~~~l~el~~~aDvV~~~l 207 (317)
..++|+|||.|.+|..+|..+...|. +|..+|+.+ .... ... ...+-.+.++.||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999998898 999999873 2110 000 1112246789999999986
Q ss_pred cCC--hh-hh-ccc--c----H---HHHhccCCCcEEEEeCCCcccCHHH
Q 042102 208 SLT--EE-TQ-HIV--N----R---QVINALGPKGVLINIGRGLLVDEHE 244 (317)
Q Consensus 208 p~~--~~-t~-~li--~----~---~~l~~mk~gavlVN~~rg~~vd~~a 244 (317)
... +. ++ .++ | + +.+....|++++++++ .++|.-.
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd~~t 134 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVDAMT 134 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHHHHH
Confidence 422 11 11 122 1 1 1233346899999997 4454433
No 303
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.01 E-value=0.028 Score=53.74 Aligned_cols=105 Identities=11% Similarity=0.142 Sum_probs=63.4
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEEE-eCCCC----CC---CCC------------------c--cccCCHH
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGY-NSRTE----KP---NLN------------------Y--KYYPNLI 194 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~~----~~---~~~------------------~--~~~~~l~ 194 (317)
+.++.|++|.|.|+|++|+.+|+.|..+|++|+. .|.+. .. ..+ + ....+.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 3468999999999999999999999999999884 44442 00 000 0 0011122
Q ss_pred Hhc-ccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 195 DLA-SNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 195 el~-~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+++ ..||+++-|.. .+.|+.+....++ ..+++-.+-+.+- .+ -.+.|++..+.
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l~-ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTIN-AKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTCC-CSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHcC-CeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 332 36888877744 4567888877774 5677777778764 33 33455555555
No 304
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.01 E-value=0.016 Score=49.11 Aligned_cols=88 Identities=19% Similarity=0.244 Sum_probs=58.5
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccc------cCCHHHhcccCCEEEEeccCChhhhc--
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKY------YPNLIDLASNCQILVVACSLTEETQH-- 215 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~------~~~l~el~~~aDvV~~~lp~~~~t~~-- 215 (317)
++|.|.| .|.||+.+++.|...|.+|.+.+|++... .+... ..+. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~~ 79 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL-SDLSDQNVVVDAYGISPDEAEKH 79 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH-HHHTTCSEEEECCCSSTTTTTSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh-hhhcCCCEEEECCcCCccccchH
Confidence 4799999 49999999999999999999998875431 11110 1112 678899999988765433211
Q ss_pred -cccHHHHhccCC--CcEEEEeCCC
Q 042102 216 -IVNRQVINALGP--KGVLINIGRG 237 (317)
Q Consensus 216 -li~~~~l~~mk~--gavlVN~~rg 237 (317)
......++.|++ ...+|++|..
T Consensus 80 ~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 80 VTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecc
Confidence 112445666654 3567877764
No 305
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.00 E-value=0.029 Score=53.62 Aligned_cols=105 Identities=14% Similarity=0.177 Sum_probs=71.4
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEE-EeCCCC-----CC-----------CCC----c-cccCCHHHhc-cc
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRTE-----KP-----------NLN----Y-KYYPNLIDLA-SN 199 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~-----~~-----------~~~----~-~~~~~l~el~-~~ 199 (317)
+.++.|+||.|-|+|++|+.+|+.|...|++|+ +.|.+. +. ..+ + ....+.++++ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 456899999999999999999999999999975 455431 00 001 0 0112345543 56
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
||+++-|.. .+.|+.+....++ -.+++-.+-+.+- . +-.+.|.+..|.
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~t-~-eA~~iL~~rGI~ 343 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPTT-I-DATKILNERGVL 343 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCBC-H-HHHHHHHHTTCE
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCCC-H-HHHHHHHHCCCE
Confidence 999887744 4668877777774 5667777788764 3 345677777776
No 306
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.98 E-value=0.032 Score=51.55 Aligned_cols=92 Identities=11% Similarity=0.149 Sum_probs=67.6
Q ss_pred ccccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCC--C----------------CC--ccccCCHHHhcccCC
Q 042102 144 TKFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKP--N----------------LN--YKYYPNLIDLASNCQ 201 (317)
Q Consensus 144 ~~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~--~----------------~~--~~~~~~l~el~~~aD 201 (317)
..+.|++|++||=| ++.++.+..+..||++|.+..+..-. . .+ .....++++.++++|
T Consensus 157 ~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aD 236 (328)
T 3grf_A 157 NGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVD 236 (328)
T ss_dssp TTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCS
T ss_pred cccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCC
Confidence 35899999999986 88899999999999999888764322 1 11 223568999999999
Q ss_pred EEEEe----ccCCh----h-----hhccccHHHHhccCCCcEEEEeC
Q 042102 202 ILVVA----CSLTE----E-----TQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 202 vV~~~----lp~~~----~-----t~~li~~~~l~~mk~gavlVN~~ 235 (317)
+|..- +...+ + ....++++.++.+|++++|.-+.
T Consensus 237 vvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 237 VVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp EEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 99863 22111 0 12457899999999999999886
No 307
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.96 E-value=0.0048 Score=53.58 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=43.8
Q ss_pred CeEEEEecChhHHHHHHH--HhhCCCEEE-EeCCCCCCC----CCc--cccCCHHHhcc-cCCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKR--AEAFDCIIG-YNSRTEKPN----LNY--KYYPNLIDLAS-NCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~--l~~~G~~V~-~~~~~~~~~----~~~--~~~~~l~el~~-~aDvV~~~lp~~ 210 (317)
++++|||+|.+|+.+++. ... |+++. ++|..+... .+. ....+++++++ +.|+|++++|..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 589999999999999985 334 88764 667655432 111 12467888876 589999999954
No 308
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.95 E-value=0.03 Score=51.38 Aligned_cols=92 Identities=10% Similarity=0.149 Sum_probs=66.6
Q ss_pred cccCCeEEEEec---ChhHHHHHHHHhhC-CCEEEEeCCCCCCCC----------C--ccccCCHHHhcccCCEEEEecc
Q 042102 145 KFTGKSVGILGM---GRIGTAIAKRAEAF-DCIIGYNSRTEKPNL----------N--YKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 145 ~l~g~~vgIiG~---G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDvV~~~lp 208 (317)
.+.|++|+++|= |++.++.+..+..+ |++|.+..+..-... + .....+++++++++|+|..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 378999999998 59999999999999 999988876432111 2 2235789999999999877532
Q ss_pred CCh----h--h----hccccHHHHhccCCCcEEEEeCC
Q 042102 209 LTE----E--T----QHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 209 ~~~----~--t----~~li~~~~l~~mk~gavlVN~~r 236 (317)
-.+ + . ...++++.++.+||+++|.-+.-
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 268 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLP 268 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCSC
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCC
Confidence 111 1 0 24568888888899999888863
No 309
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=95.95 E-value=0.089 Score=49.04 Aligned_cols=96 Identities=13% Similarity=0.064 Sum_probs=68.2
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEec
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~l 207 (317)
.+.|.+|++||= +++.++.+..+..||++|.+..+..-... + .....+++ .++++|+|..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 488999999996 67888999999999999988876432211 1 22356788 999999998632
Q ss_pred ----cC---C-hh----h--hccccHHHHhccCCCcEEEEeC---CCcccC
Q 042102 208 ----SL---T-EE----T--QHIVNRQVINALGPKGVLINIG---RGLLVD 241 (317)
Q Consensus 208 ----p~---~-~~----t--~~li~~~~l~~mk~gavlVN~~---rg~~vd 241 (317)
.. . ++ . ...++.+.++.+|++++|.-+. ||.=|+
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt 279 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVT 279 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBC
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeC
Confidence 10 0 11 1 1457889999999999999886 454443
No 310
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.92 E-value=0.0057 Score=59.47 Aligned_cols=110 Identities=7% Similarity=0.014 Sum_probs=68.5
Q ss_pred CCeEEEEecChh-HHHHHHHHhhC-----CCEEEEeCCCCCCC---------------CC--ccccCCHHHhcccCCEEE
Q 042102 148 GKSVGILGMGRI-GTAIAKRAEAF-----DCIIGYNSRTEKPN---------------LN--YKYYPNLIDLASNCQILV 204 (317)
Q Consensus 148 g~~vgIiG~G~i-G~~~a~~l~~~-----G~~V~~~~~~~~~~---------------~~--~~~~~~l~el~~~aDvV~ 204 (317)
.++|+|||.|.. |.++|..|... +.+|..||+.++.. .. .....++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 66666555443 55799999876421 01 112357889999999999
Q ss_pred EeccCChh---hh--------c--------------------ccc--HHHHhccCCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 205 VACSLTEE---TQ--------H--------------------IVN--RQVINALGPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 205 ~~lp~~~~---t~--------~--------------------li~--~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
++.|.... ++ + ++- .+.+....|+++++|++-.-=+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99986321 11 0 110 123344568999999976543444444444434
Q ss_pred CCceEE
Q 042102 252 GRLGGA 257 (317)
Q Consensus 252 g~i~ga 257 (317)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 466655
No 311
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.90 E-value=0.015 Score=52.47 Aligned_cols=60 Identities=18% Similarity=0.245 Sum_probs=45.2
Q ss_pred CeEEEEe-cChhHHHHHHHHhh-CCCEEE-EeCCCCCCC------------CCccccCCHHHhcccCCEEEEecc
Q 042102 149 KSVGILG-MGRIGTAIAKRAEA-FDCIIG-YNSRTEKPN------------LNYKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~-~G~~V~-~~~~~~~~~------------~~~~~~~~l~el~~~aDvV~~~lp 208 (317)
.+|+|+| +|.||+.+++.+.. -++++. +++++.... .+.....+++++++++|+|+-+.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 5899999 99999999998864 467765 477764211 123345789999999999988765
No 312
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.88 E-value=0.011 Score=54.37 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=66.6
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC---------------CccccCCHHHhcccCCEEEEeccC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL---------------NYKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~---------------~~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
..++|+|||.|.+|..++..+...|. +|..+|..++... ......+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 34699999999999999999886674 7989987642110 001111346779999999999865
Q ss_pred Chh---hh--------cccc--HHHHhccCCCcEEEEeCCCcccCHH--HHHHH--HHhCCceEE
Q 042102 210 TEE---TQ--------HIVN--RQVINALGPKGVLINIGRGLLVDEH--ELVSA--LLQGRLGGA 257 (317)
Q Consensus 210 ~~~---t~--------~li~--~~~l~~mk~gavlVN~~rg~~vd~~--aL~~a--l~~g~i~ga 257 (317)
... ++ .++. .+.+....|++++++++ ..+|.- .+.+. +...++.|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHhCCCHHHEEec
Confidence 321 11 1110 12233347899999975 445443 33332 233356555
No 313
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.85 E-value=0.034 Score=51.70 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=51.9
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCC-CEEEEeCCCCCCCC----------C--ccccCCHHHhcccCCEEEEeccCChhhh
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFD-CIIGYNSRTEKPNL----------N--YKYYPNLIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDvV~~~lp~~~~t~ 214 (317)
.+|||+| .|.+|+.+.+.|.... +++.+..+...... + .....++++ +..+|+|++|+|.....+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s~~ 83 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVFAR 83 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHHHH
Confidence 5899999 7999999999998655 47655433221110 0 001123444 578999999999764422
Q ss_pred ccccHHHHhccCCCcEEEEeCC
Q 042102 215 HIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~r 236 (317)
+ -+. .++.|..+|+.+-
T Consensus 84 -~-a~~---~~~aG~~VId~Sa 100 (345)
T 2ozp_A 84 -E-FDR---YSALAPVLVDLSA 100 (345)
T ss_dssp -T-HHH---HHTTCSEEEECSS
T ss_pred -H-HHH---HHHCCCEEEEcCc
Confidence 1 122 2467888999875
No 314
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=95.85 E-value=0.03 Score=52.42 Aligned_cols=91 Identities=12% Similarity=0.102 Sum_probs=67.7
Q ss_pred ccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCC--C--------------C--ccccCCHHHhcccCCEEEE
Q 042102 146 FTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPN--L--------------N--YKYYPNLIDLASNCQILVV 205 (317)
Q Consensus 146 l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~--~--------------~--~~~~~~l~el~~~aDvV~~ 205 (317)
+.|++|++||=| ++.++.+..+..+|++|.+..|..-.. . + .....+++++++.+|+|..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 889999999988 788999999999999998887643111 0 1 2235789999999999987
Q ss_pred ec----cCChh---------hhccccHHHHhccCCCcEEEEeCC
Q 042102 206 AC----SLTEE---------TQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 206 ~l----p~~~~---------t~~li~~~~l~~mk~gavlVN~~r 236 (317)
-+ ....+ ....++++.++.+|++++|.-+.-
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP 301 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLP 301 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSC
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCC
Confidence 32 11111 124578999999999999998853
No 315
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.84 E-value=0.011 Score=55.11 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=45.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhC--------CCEE-EEeCCCCCCCC------Cc-cccCCHHHhcc--cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAF--------DCII-GYNSRTEKPNL------NY-KYYPNLIDLAS--NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~--------G~~V-~~~~~~~~~~~------~~-~~~~~l~el~~--~aDvV~~~lp 208 (317)
+..+|||||+|.||+.-++.++.+ +++| .++|+++.... +. ..+.+++++++ +.|+|++++|
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC
Confidence 445899999999999877766543 4665 47788765431 22 34678999986 4799999999
Q ss_pred CCh
Q 042102 209 LTE 211 (317)
Q Consensus 209 ~~~ 211 (317)
...
T Consensus 104 ~~~ 106 (393)
T 4fb5_A 104 NQF 106 (393)
T ss_dssp GGG
T ss_pred hHH
Confidence 654
No 316
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.84 E-value=0.062 Score=51.25 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=69.8
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhh-CCCEEE-EeCCCCC---C--C---------------CCcc--ccCCHHHhc-
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEA-FDCIIG-YNSRTEK---P--N---------------LNYK--YYPNLIDLA- 197 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~-~G~~V~-~~~~~~~---~--~---------------~~~~--~~~~l~el~- 197 (317)
+.++.|++|.|.|+|++|+.+++.|.. .|++|+ +.|.+.. + . .++. ...+.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 446899999999999999999999998 999987 4454210 0 0 0000 111345554
Q ss_pred ccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 198 SNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 198 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
..||+++-|.. .+.++.+....++ ..+++-.+-+.+- .++ .+.|.+..+.
T Consensus 284 ~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 333 (415)
T 2tmg_A 284 LDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEA-DEILSRRGIL 333 (415)
T ss_dssp CSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHH-HHHHHHCCCE
Confidence 47999888865 4557777777774 5566777777764 333 3556666665
No 317
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.84 E-value=0.012 Score=49.14 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=47.4
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----Ccc-------ccCCHHHhcccCCEEEEeccCC
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYK-------YYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~el~~~aDvV~~~lp~~ 210 (317)
+++|.|.|. |.||+.+++.|...|.+|.+.+|++.... ... ...++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 478999998 99999999999999999998888654321 111 1124567788999998887644
No 318
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.84 E-value=0.0091 Score=53.15 Aligned_cols=93 Identities=19% Similarity=0.207 Sum_probs=58.4
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC-Cc-------cccCCHHHhccc-CCEEEEeccCChhh-hc-
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL-NY-------KYYPNLIDLASN-CQILVVACSLTEET-QH- 215 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~-------~~~~~l~el~~~-aDvV~~~lp~~~~t-~~- 215 (317)
.+++|.|.|.|.||+.+++.|...|.+|.+.+|+..... +. ....++.++++. +|+|+.+...+... ..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 81 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHY 81 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC----
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHH
Confidence 357899999999999999999999999999888754321 11 112234556666 99988776432110 00
Q ss_pred ----cc-cHHHHhccCC-C-cEEEEeCCCcc
Q 042102 216 ----IV-NRQVINALGP-K-GVLINIGRGLL 239 (317)
Q Consensus 216 ----li-~~~~l~~mk~-g-avlVN~~rg~~ 239 (317)
+. ....++.++. + ..||.+|...+
T Consensus 82 ~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~v 112 (286)
T 3gpi_A 82 RLSYVEGLRNTLSALEGAPLQHVFFVSSTGV 112 (286)
T ss_dssp -CCSHHHHHHHHHHTTTSCCCEEEEEEEGGG
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEcccEE
Confidence 00 1334455543 2 46777776544
No 319
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.83 E-value=0.0098 Score=50.77 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=47.8
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCCC----------ccc-cCCHHHhcccCCEEEEeccCCh
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNLN----------YKY-YPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~----------~~~-~~~l~el~~~aDvV~~~lp~~~ 211 (317)
++|.|.| .|.||+.+++.|...|++|.+.+|+...... ... ..++.++++++|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 4789999 7999999999999999999999887643211 111 2245677889999998877553
No 320
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.79 E-value=0.025 Score=52.89 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=55.1
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCC------CEEEEeC-CC-CCCCC-----------Cccc-cCCHHHhcccCCEEEEec
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFD------CIIGYNS-RT-EKPNL-----------NYKY-YPNLIDLASNCQILVVAC 207 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G------~~V~~~~-~~-~~~~~-----------~~~~-~~~l~el~~~aDvV~~~l 207 (317)
++|+|+| .|.+|+.+.+.|...+ .++..+. ++ ..+.. .... ..+. +.++.+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 6899999 9999999999998766 4665543 22 21110 0000 1132 3356899999999
Q ss_pred cCChhhhccccHHHHhccCCCcEEEEeCCCcccC
Q 042102 208 SLTEETQHIVNRQVINALGPKGVLINIGRGLLVD 241 (317)
Q Consensus 208 p~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd 241 (317)
|... ..+..+.++.|..+|+.|..--.+
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~ 116 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLT 116 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCS
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCC
Confidence 9653 344444456689999987544333
No 321
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.78 E-value=0.015 Score=49.56 Aligned_cols=88 Identities=17% Similarity=0.147 Sum_probs=57.5
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc------cCCHHHhcccCCEEEEeccCC--hh--
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY------YPNLIDLASNCQILVVACSLT--EE-- 212 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~------~~~l~el~~~aDvV~~~lp~~--~~-- 212 (317)
++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+... ..+. +.+..+|+|+.+.... +.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~ 79 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVPWGSGRG 79 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCCTTSSCT
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-hhcccCCEEEECCccCCCcchh
Confidence 47899997 9999999999999999999998875321 11110 1112 6788999998887653 11
Q ss_pred hhcc-ccHHHHhccCC-CcEEEEeCCC
Q 042102 213 TQHI-VNRQVINALGP-KGVLINIGRG 237 (317)
Q Consensus 213 t~~l-i~~~~l~~mk~-gavlVN~~rg 237 (317)
..++ .....++.|++ |..+|++|..
T Consensus 80 ~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 80 YLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred hHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 0011 12445666653 4678888653
No 322
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.77 E-value=0.007 Score=56.12 Aligned_cols=64 Identities=8% Similarity=0.143 Sum_probs=46.8
Q ss_pred CeEEEEecChhHH-HHHHHHhhC-CCEEE-EeCCCCCCC-------CCccccCCHHHhccc--CCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGT-AIAKRAEAF-DCIIG-YNSRTEKPN-------LNYKYYPNLIDLASN--CQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~-~~a~~l~~~-G~~V~-~~~~~~~~~-------~~~~~~~~l~el~~~--aDvV~~~lp~~~~ 212 (317)
.+|||||+|.||+ ..+..++.. +++|. +++++.... .+...+.+++++++. .|+|++++|....
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTH 78 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHH
Confidence 4899999999998 567777665 67764 778762111 233456789999886 8999999996543
No 323
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.74 E-value=0.012 Score=53.33 Aligned_cols=101 Identities=16% Similarity=0.096 Sum_probs=62.4
Q ss_pred CeEEEEecChhHHHHHHHHhh----CCCEEE-EeCCCCCCC-CCccccCCHHHhcc--cCCEEEEeccCChhhhccccHH
Q 042102 149 KSVGILGMGRIGTAIAKRAEA----FDCIIG-YNSRTEKPN-LNYKYYPNLIDLAS--NCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~----~G~~V~-~~~~~~~~~-~~~~~~~~l~el~~--~aDvV~~~lp~~~~t~~li~~~ 220 (317)
.+|||||+|.||+..++.+.. -++++. +++++.... .+.. ..+++++++ +.|+|++++|...... -
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~-----~ 81 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVR-QISLEDALRSQEIDVAYICSESSSHED-----Y 81 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHH-----H
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHHHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHH-----H
Confidence 489999999999999888865 356654 667653221 1222 478999987 6899999999543322 2
Q ss_pred HHhccCCCc-EEEEe-CCCcccCHHHHHHHHHhCCce
Q 042102 221 VINALGPKG-VLINI-GRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 221 ~l~~mk~ga-vlVN~-~rg~~vd~~aL~~al~~g~i~ 255 (317)
....++.|. +++.- ---.+-+.+.|.++.++..+.
T Consensus 82 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 82 IRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp HHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 223344454 55552 111223445677766655544
No 324
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.74 E-value=0.054 Score=51.95 Aligned_cols=105 Identities=17% Similarity=0.147 Sum_probs=69.7
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEE-EeCCCC-----CC---------------CCCc--cccCCHHHhc-c
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRTE-----KP---------------NLNY--KYYPNLIDLA-S 198 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~-----~~---------------~~~~--~~~~~l~el~-~ 198 (317)
+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+. +. ..++ ....+.++++ .
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 346889999999999999999999999999987 445421 00 0000 0112345554 4
Q ss_pred cCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 199 NCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 199 ~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
.||+++-|.. .+.|+.+....++ ..+++-.+-+.+- .++ .+.|.+..|.
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAA-DDILLEKGVL 358 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHHTCE
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHH-HHHHHHCCCE
Confidence 7999988854 4567777777774 5667777777764 333 3556666665
No 325
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.74 E-value=0.013 Score=54.40 Aligned_cols=99 Identities=21% Similarity=0.175 Sum_probs=61.2
Q ss_pred CeEEEEecChhHHHHHHHHhhC---------CCEE-EEeCCCCCCCCCc---cccCCHHHhcccCCEEEEeccCChhhhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF---------DCII-GYNSRTEKPNLNY---KYYPNLIDLASNCQILVVACSLTEETQH 215 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~---------G~~V-~~~~~~~~~~~~~---~~~~~l~el~~~aDvV~~~lp~~~~t~~ 215 (317)
.+|||||+|.||+.+++.+... +++| .+++++.....+. ....++++++ +.|+|+.+.|.......
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~ 82 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR 82 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH
Confidence 4799999999999999988665 4565 4667665433221 2345778888 99999999886532111
Q ss_pred cccHHHHhccCCCcEEEEeCCCcc-cCHHHHHHHHHhC
Q 042102 216 IVNRQVINALGPKGVLINIGRGLL-VDEHELVSALLQG 252 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg~~-vd~~aL~~al~~g 252 (317)
-..+.++.|.-+|...-..+ -..+.|.++.++.
T Consensus 83 ----~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 ----LVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp ----HHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred ----HHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 11234455555554322222 2445666666665
No 326
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.74 E-value=0.0099 Score=57.25 Aligned_cols=110 Identities=15% Similarity=0.220 Sum_probs=69.6
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC---------CCccc--cCCHHHhccc-CCEEEEeccC---
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN---------LNYKY--YPNLIDLASN-CQILVVACSL--- 209 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---------~~~~~--~~~l~el~~~-aDvV~~~lp~--- 209 (317)
++.|++|.|||+|..|.++|+.|+..|++|.++|...... .+... -...++++.. +|+|+..-..
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 4789999999999999999999999999999999754211 12211 1223356666 8988886322
Q ss_pred Chhh-----hc--cccH-HHHhccCCCcEE-EEeCCCcccCHHHHHHHHHhCCc
Q 042102 210 TEET-----QH--IVNR-QVINALGPKGVL-INIGRGLLVDEHELVSALLQGRL 254 (317)
Q Consensus 210 ~~~t-----~~--li~~-~~l~~mk~gavl-VN~~rg~~vd~~aL~~al~~g~i 254 (317)
+|.. ++ ++++ +.+..+.+..++ |--+.|..--..-+...|+....
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 2221 11 3443 334343344444 44356887777777777775443
No 327
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.73 E-value=0.0072 Score=56.10 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=59.6
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC--------CCcc--------ccCCHHHhcccCCEEEEeccC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN--------LNYK--------YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~--------~~~~--------~~~~l~el~~~aDvV~~~lp~ 209 (317)
.+++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+.. ...++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 3678999995 9999999999998999999887765431 0111 112356778999999876654
Q ss_pred ChhhhccccHHHHhccCC-C--cEEEEeCCCc
Q 042102 210 TEETQHIVNRQVINALGP-K--GVLINIGRGL 238 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~-g--avlVN~~rg~ 238 (317)
.....+......++.++. | ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311112223445554433 3 4788887754
No 328
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.67 E-value=0.01 Score=55.24 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=60.5
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc-----cC-CHHHh-cccCCEEEEeccCChhhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY-----YP-NLIDL-ASNCQILVVACSLTEETQ 214 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~-----~~-~l~el-~~~aDvV~~~lp~~~~t~ 214 (317)
.|.+|.|+|.|.+|..+++.++.+|++|++.+++++.. .+... .. ++.+. ....|+|+-+...++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 47899999999999999999999999999988765432 11111 11 33332 246899988877521 0
Q ss_pred ccccHHHHhccCCCcEEEEeCCC
Q 042102 215 HIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~rg 237 (317)
..+ ...++.++++..+|.++..
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCCC
T ss_pred HHH-HHHHHHhcCCCEEEEecCC
Confidence 112 3456778888888888753
No 329
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=95.67 E-value=0.055 Score=49.86 Aligned_cols=97 Identities=11% Similarity=0.177 Sum_probs=69.0
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEec
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~l 207 (317)
.+.|+||++||= +++.++.+..+..+|++|.+..|..-... + .....+++++++++|+|..-.
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 378999999996 57888888889999999988876432111 1 224578999999999987643
Q ss_pred cCC----h------h--hhccccHHHHhccCCCcEEEEeC---CCcccC
Q 042102 208 SLT----E------E--TQHIVNRQVINALGPKGVLINIG---RGLLVD 241 (317)
Q Consensus 208 p~~----~------~--t~~li~~~~l~~mk~gavlVN~~---rg~~vd 241 (317)
=.. . + ....++.+.++.+|++++|.-+. ||.=|+
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~ 282 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEIT 282 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBC
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeC
Confidence 111 0 0 12357899999999999999885 454343
No 330
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.66 E-value=0.031 Score=50.75 Aligned_cols=84 Identities=14% Similarity=0.065 Sum_probs=54.6
Q ss_pred CeEEEEe-cChhHHHHHHHHh-hCCCEEE-EeCCCCCC-------------CCCccccCCHHHhcccCCEEEEeccCChh
Q 042102 149 KSVGILG-MGRIGTAIAKRAE-AFDCIIG-YNSRTEKP-------------NLNYKYYPNLIDLASNCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~-~~G~~V~-~~~~~~~~-------------~~~~~~~~~l~el~~~aDvV~~~lp~~~~ 212 (317)
.+|+|+| +|+||+.+++.+. .-++++. +++++... ..+.....++++++.++|+|+-..+ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 5899999 9999999999886 4578754 66775421 1223345789999999999987654 22
Q ss_pred hhccccHHHHhccCCCcEEEEeCCC
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
.. .+.....++.|.-+|-...|
T Consensus 100 a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 100 AS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HH---HHHHHHHHHHTCEEEECCCC
T ss_pred HH---HHHHHHHHHcCCCEEEECCC
Confidence 11 11122234456556655555
No 331
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.66 E-value=0.014 Score=53.11 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=66.0
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCE-EEEeCCCCC--CCCCccccCCHHHhcc--cCCEEEEeccCChhhhccccHHHH
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCI-IGYNSRTEK--PNLNYKYYPNLIDLAS--NCQILVVACSLTEETQHIVNRQVI 222 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~-V~~~~~~~~--~~~~~~~~~~l~el~~--~aDvV~~~lp~~~~t~~li~~~~l 222 (317)
.++.|+|. |++|+.+++.+...|++ |...++... ...+...+.+++++.. .+|++++++|... +...+ ++..
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~-~~~~v-~ea~ 91 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPF-AKDAV-FEAI 91 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHH-HHHHH-HHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHH-HHHHH-HHHH
Confidence 35788899 99999999999988987 335554421 1134455788999988 8999999998432 22222 2222
Q ss_pred hccCCCcEEEEeCCC-cccCHHHHHHHHHhCCce
Q 042102 223 NALGPKGVLINIGRG-LLVDEHELVSALLQGRLG 255 (317)
Q Consensus 223 ~~mk~gavlVN~~rg-~~vd~~aL~~al~~g~i~ 255 (317)
+ .+... +|..+.| ..-+++.|.++.++..+.
T Consensus 92 ~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 92 D-AGIEL-IVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp H-TTCSE-EEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2 12222 3444444 223566888888877665
No 332
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.64 E-value=0.0095 Score=54.99 Aligned_cols=63 Identities=11% Similarity=0.289 Sum_probs=46.0
Q ss_pred CeEEEEecChhHHH-HHHHHhhC-CCEEE-EeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCCh
Q 042102 149 KSVGILGMGRIGTA-IAKRAEAF-DCIIG-YNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~ 211 (317)
.++||||+|.||+. .+..++.. +++|. ++|++++.. .+. ..+.+++++++ +.|+|++++|...
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~ 98 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQ 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCch
Confidence 48999999999986 56667655 67765 678775432 122 24678999985 4799999999654
No 333
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.62 E-value=0.0061 Score=56.83 Aligned_cols=88 Identities=23% Similarity=0.309 Sum_probs=59.5
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCC---CCC-----CCcccc-C-CHHHhc----ccCCEEEEeccCC
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTE---KPN-----LNYKYY-P-NLIDLA----SNCQILVVACSLT 210 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~---~~~-----~~~~~~-~-~l~el~----~~aDvV~~~lp~~ 210 (317)
.+.|++|.|+|.|.+|..+++.++.+|++|++.+++. +.. .+.... . ++.+.+ ...|+|+.+....
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4679999999999999999999999999999988765 321 111111 0 111111 3478888877643
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
... + +..++.|+++..+|+++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 322 0 455677888888888864
No 334
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.61 E-value=0.017 Score=53.14 Aligned_cols=108 Identities=14% Similarity=0.169 Sum_probs=65.1
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------------CccccCCHHHhcccCCEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------------NYKYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
.++|+|||.|.+|..++..+...+. ++..+|...+... ......+..+.++.||+|+++.+...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 3699999999999999999986665 7888998543210 01111244677999999999976532
Q ss_pred h---hh--------cccc--HHHHhccCCCcEEEEeCCCcccCHH--HHHHH--HHhCCceEE
Q 042102 212 E---TQ--------HIVN--RQVINALGPKGVLINIGRGLLVDEH--ELVSA--LLQGRLGGA 257 (317)
Q Consensus 212 ~---t~--------~li~--~~~l~~mk~gavlVN~~rg~~vd~~--aL~~a--l~~g~i~ga 257 (317)
. ++ .++. .+.+....|+++++++ ..++|.- .+.+. +...++.|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA--ANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEEC--SSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCcHHHHHHHHHHHcCCCHHHEEec
Confidence 2 11 1110 1223334789999997 4455443 23232 233356555
No 335
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.61 E-value=0.022 Score=51.51 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=48.4
Q ss_pred ccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC------------C--------CccccCCHHHhcccCCE
Q 042102 144 TKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN------------L--------NYKYYPNLIDLASNCQI 202 (317)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~------------~--------~~~~~~~l~el~~~aDv 202 (317)
..+.|++|.|.|. |.||+.+++.|...|++|.+.+|+.... . +.....+++++++.+|+
T Consensus 7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 3467899999998 9999999999999999999887753210 0 11112345677788998
Q ss_pred EEEeccC
Q 042102 203 LVVACSL 209 (317)
Q Consensus 203 V~~~lp~ 209 (317)
|+.+...
T Consensus 87 vih~A~~ 93 (342)
T 1y1p_A 87 VAHIASV 93 (342)
T ss_dssp EEECCCC
T ss_pred EEEeCCC
Confidence 8877643
No 336
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.59 E-value=0.013 Score=53.75 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=57.6
Q ss_pred eEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---------------C--ccccCCHHHhcccCCEEEEeccCCh
Q 042102 150 SVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---------------N--YKYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 150 ~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
+|+|||.|.+|..++..+...|+ +|..+|...+... . .....+. +.++.||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999998876676 6988998754211 1 1111454 67999999999966433
Q ss_pred h-----------hhcccc--HHHHhccCCCcEEEEeCCCcccCH
Q 042102 212 E-----------TQHIVN--RQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 212 ~-----------t~~li~--~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
. +..++. .+.+....|++++|+++- .+|.
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN--Pv~~ 121 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN--PVDA 121 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC--chHH
Confidence 1 111110 112233358999999744 5554
No 337
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.58 E-value=0.014 Score=54.09 Aligned_cols=64 Identities=23% Similarity=0.206 Sum_probs=45.7
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCc------------------cccCCHHHhcccCCE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNY------------------KYYPNLIDLASNCQI 202 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~------------------~~~~~l~el~~~aDv 202 (317)
.+|||+|+|.||+.+++.+... ++++. +.+++++.. .++ ....+.++++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3799999999999999999765 46764 555543211 110 123578888889999
Q ss_pred EEEeccCChh
Q 042102 203 LVVACSLTEE 212 (317)
Q Consensus 203 V~~~lp~~~~ 212 (317)
|+.++|....
T Consensus 83 V~~aTp~~~h 92 (334)
T 2czc_A 83 IVDATPGGIG 92 (334)
T ss_dssp EEECCSTTHH
T ss_pred EEECCCcccc
Confidence 9999996643
No 338
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.56 E-value=0.2 Score=45.42 Aligned_cols=65 Identities=12% Similarity=0.058 Sum_probs=51.6
Q ss_pred cccCCeEEEEec---ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----CccccCCHHHhcccCCEEEEeccCC
Q 042102 145 KFTGKSVGILGM---GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 145 ~l~g~~vgIiG~---G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
.+.|.+|+++|= +++.++.+..+..+|++|.+..+..-... +.....+++++++++|+|.. +-..
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q 215 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQ 215 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcc
Confidence 378999999997 89999999999999999988876432111 23346789999999999988 5543
No 339
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.56 E-value=0.02 Score=53.64 Aligned_cols=86 Identities=10% Similarity=0.101 Sum_probs=59.3
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHhc--c
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVINA--L 225 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~~--m 225 (317)
-.++-|+|.|.+|+++++.++.+|++|.++|..+.... .+-+..+|-++...| .+.+.. +
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~--------~~~fp~a~~v~~~~p----------~~~~~~~~~ 260 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE--------KHFFPDADEIIVDFP----------ADFLRKFLI 260 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC--------GGGCTTCSEEEESCH----------HHHHHHSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc--------cccCCCceEEecCCH----------HHHHhhcCC
Confidence 35799999999999999999999999999887653221 112344564444333 112222 4
Q ss_pred CCCcEEEEeCCCcccCHHHHHHHHHh
Q 042102 226 GPKGVLINIGRGLLVDEHELVSALLQ 251 (317)
Q Consensus 226 k~gavlVN~~rg~~vd~~aL~~al~~ 251 (317)
.+++.+|=+.++.-.|...|..+|++
T Consensus 261 ~~~t~vvv~TH~h~~D~~~L~~aL~~ 286 (362)
T 3on5_A 261 RPDDFVLIMTHHFQKDQEILHFLLEK 286 (362)
T ss_dssp CTTCEEEECCSCHHHHHHHHHHHSSS
T ss_pred CCCeEEEEEeCCchhhHHHHHHHhcC
Confidence 56777777778777787777777765
No 340
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.55 E-value=0.0077 Score=57.87 Aligned_cols=63 Identities=11% Similarity=0.133 Sum_probs=47.8
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCC---------CC---ccccC----CHHHhcc--cCCEEEEecc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPN---------LN---YKYYP----NLIDLAS--NCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~---------~~---~~~~~----~l~el~~--~aDvV~~~lp 208 (317)
.+|||||+|.||+..++.++.. |++| .++|+++... .+ ...+. +++++++ +.|+|++++|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 5899999999999999988875 6776 5778765421 01 23355 8999997 5899999999
Q ss_pred CCh
Q 042102 209 LTE 211 (317)
Q Consensus 209 ~~~ 211 (317)
...
T Consensus 101 ~~~ 103 (444)
T 2ixa_A 101 WEW 103 (444)
T ss_dssp GGG
T ss_pred cHH
Confidence 654
No 341
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.55 E-value=0.022 Score=49.09 Aligned_cols=65 Identities=17% Similarity=0.134 Sum_probs=49.5
Q ss_pred ccCCeEEEEe-cChhHHHHHHHHhhCCC--EEEEeCCCCCCCCC------------ccccCCHHHhcccCCEEEEeccCC
Q 042102 146 FTGKSVGILG-MGRIGTAIAKRAEAFDC--IIGYNSRTEKPNLN------------YKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~------------~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
+.++++.|.| .|.||+.+++.|...|+ +|.+.+|++..... .....+++++++.+|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5678999999 69999999999999999 99988886543211 111234667788999998887654
No 342
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.55 E-value=0.076 Score=48.58 Aligned_cols=98 Identities=11% Similarity=0.111 Sum_probs=70.6
Q ss_pred ccc-CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC----------------CccccCCHHHhcccCCEEEEe
Q 042102 145 KFT-GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL----------------NYKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~-g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~el~~~aDvV~~~ 206 (317)
.+. |++|++||= +++.++.+..+..||++|.+..|..-... ......++++.++++|+|..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 377 999999996 57888888899999999988876432111 112346899999999999775
Q ss_pred c---cCCh-h--------hhccccHHHHhccCCCcEEEEeC---CCcccCH
Q 042102 207 C---SLTE-E--------TQHIVNRQVINALGPKGVLINIG---RGLLVDE 242 (317)
Q Consensus 207 l---p~~~-~--------t~~li~~~~l~~mk~gavlVN~~---rg~~vd~ 242 (317)
. -..+ + ....++.+.++.+|++++|.-+. ||.=|+.
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~ 272 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSE 272 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCH
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCH
Confidence 4 1110 0 12457899999999999999986 5655543
No 343
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.52 E-value=0.024 Score=51.64 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=65.0
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCE-EEEeCCCC--CCCCCccccCCHHHhcc--c-CCEEEEeccCChhhhccccHHH
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCI-IGYNSRTE--KPNLNYKYYPNLIDLAS--N-CQILVVACSLTEETQHIVNRQV 221 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~-V~~~~~~~--~~~~~~~~~~~l~el~~--~-aDvV~~~lp~~~~t~~li~~~~ 221 (317)
.++.|+|. |++|+.+++.+...|++ |...++.. ....+...+.+++++.. . .|++++++|.... ...+. +.
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~-~~~v~-ea 91 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAPFA-PDAVY-EA 91 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGGGH-HHHHH-HH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHHHH-HHHHH-HH
Confidence 35677798 99999999999988997 34556543 11234556788999887 5 9999999985432 32222 22
Q ss_pred HhccCCCcEEEEeCCCc-ccCHHHHHHHHHhCCce
Q 042102 222 INALGPKGVLINIGRGL-LVDEHELVSALLQGRLG 255 (317)
Q Consensus 222 l~~mk~gavlVN~~rg~-~vd~~aL~~al~~g~i~ 255 (317)
.+ .+... +|..+.|= .-+++.|.++.++..+.
T Consensus 92 ~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 92 VD-AGIRL-VVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22 12222 34444442 23556888888877665
No 344
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.51 E-value=0.082 Score=49.27 Aligned_cols=92 Identities=10% Similarity=0.053 Sum_probs=65.6
Q ss_pred ccccCCeEEEEecC-hhHHHHHHHHhhCCCEEEEeCCCCCC-C-----------------CCccccCCHHHhcccCCEEE
Q 042102 144 TKFTGKSVGILGMG-RIGTAIAKRAEAFDCIIGYNSRTEKP-N-----------------LNYKYYPNLIDLASNCQILV 204 (317)
Q Consensus 144 ~~l~g~~vgIiG~G-~iG~~~a~~l~~~G~~V~~~~~~~~~-~-----------------~~~~~~~~l~el~~~aDvV~ 204 (317)
..+.|++|++||=+ ++.++.+..+..||++|.+..+..-. . ..+....+++|+++++|+|.
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvy 263 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIV 263 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEE
Confidence 45899999999976 57788888889999999888764321 1 01224578999999999997
Q ss_pred Eec--cCChh----------hhccccHHHHhc--cCCCcEEEEeC
Q 042102 205 VAC--SLTEE----------TQHIVNRQVINA--LGPKGVLINIG 235 (317)
Q Consensus 205 ~~l--p~~~~----------t~~li~~~~l~~--mk~gavlVN~~ 235 (317)
.-. +...+ ....++.+.++. +|++++|.-+.
T Consensus 264 td~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 264 TDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp ECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred eCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 632 21111 123578888888 89999998886
No 345
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.51 E-value=0.019 Score=53.01 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=59.3
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------------CccccCCHHHhcccCCEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------------NYKYYPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDvV~~~lp~~~ 211 (317)
.++|+|||.|.+|..++..+...+. ++..+|...+... ......+..+.++.||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4699999999999999999976665 7888997543210 01111244677999999999976533
Q ss_pred hh---h--------cccc--HHHHhccCCCcEEEEeCCCcccCH
Q 042102 212 ET---Q--------HIVN--RQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 212 ~t---~--------~li~--~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
.- + .++. .+.+....|+++++++ ..++|.
T Consensus 89 k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~ 130 (326)
T 2zqz_A 89 KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDI 130 (326)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHH
Confidence 21 0 1110 1122333689999997 445554
No 346
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.50 E-value=0.0075 Score=57.35 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=54.0
Q ss_pred CeEEEEecChhHHHHHHHHhhCC---CEEEEeCCCCCCCC------------Ccc-------ccCCHHHhccc--CCEEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD---CIIGYNSRTEKPNL------------NYK-------YYPNLIDLASN--CQILV 204 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G---~~V~~~~~~~~~~~------------~~~-------~~~~l~el~~~--aDvV~ 204 (317)
++|+|+|.|.||+.+++.|...| .+|.+.+|+..+.. ... ...++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999888 38988888653210 010 11346677777 89999
Q ss_pred EeccCChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 205 VACSLTEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 205 ~~lp~~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
.+.|.... ..++ . ..++.|.-+++++-
T Consensus 82 n~ag~~~~-~~v~-~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQD-LTIM-E---ACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGGH-HHHH-H---HHHHHTCCEEESSC
T ss_pred ECCCcccC-hHHH-H---HHHHhCCCEEEecC
Confidence 88774321 1111 1 22345666777644
No 347
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.46 E-value=0.019 Score=55.80 Aligned_cols=64 Identities=19% Similarity=0.292 Sum_probs=48.9
Q ss_pred CCeEEEEec----ChhHHHHHHHHhhC--CCEE-EEeCCCCCCC------CCc---cccCCHHHhcc--cCCEEEEeccC
Q 042102 148 GKSVGILGM----GRIGTAIAKRAEAF--DCII-GYNSRTEKPN------LNY---KYYPNLIDLAS--NCQILVVACSL 209 (317)
Q Consensus 148 g~~vgIiG~----G~iG~~~a~~l~~~--G~~V-~~~~~~~~~~------~~~---~~~~~l~el~~--~aDvV~~~lp~ 209 (317)
-.+|||||+ |.||+..++.++.. +++| .++|+++... .+. ..+.+++++++ +.|+|++++|.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 368999999 99999999999876 6776 4788765421 122 25678999986 69999999995
Q ss_pred Ch
Q 042102 210 TE 211 (317)
Q Consensus 210 ~~ 211 (317)
..
T Consensus 119 ~~ 120 (479)
T 2nvw_A 119 PE 120 (479)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 348
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.038 Score=51.50 Aligned_cols=86 Identities=13% Similarity=0.139 Sum_probs=60.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc----c---CCHHHhcc-----cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY----Y---PNLIDLAS-----NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~el~~-----~aDvV~~~lp 208 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++++.. .+... . .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 899988765432 12111 1 23433332 4788888766
Q ss_pred CChhhhccccHHHHhccCCC-cEEEEeCCC
Q 042102 209 LTEETQHIVNRQVINALGPK-GVLINIGRG 237 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~g-avlVN~~rg 237 (317)
..+. -...++.++++ ..+|.++-.
T Consensus 272 ~~~~-----~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 NVGV-----MRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSCC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEEcCC
Confidence 3221 24567788988 888888743
No 349
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.45 E-value=0.012 Score=56.56 Aligned_cols=64 Identities=20% Similarity=0.283 Sum_probs=48.9
Q ss_pred CCeEEEEec----ChhHHHHHHHHhhC--CCEE-EEeCCCCCCC------CCc---cccCCHHHhcc--cCCEEEEeccC
Q 042102 148 GKSVGILGM----GRIGTAIAKRAEAF--DCII-GYNSRTEKPN------LNY---KYYPNLIDLAS--NCQILVVACSL 209 (317)
Q Consensus 148 g~~vgIiG~----G~iG~~~a~~l~~~--G~~V-~~~~~~~~~~------~~~---~~~~~l~el~~--~aDvV~~~lp~ 209 (317)
-.+|||||+ |.||+..++.++.. +++| .++|++.... .+. ..+.+++++++ +.|+|++++|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 358999999 99999999999887 6776 5788765421 122 24678999986 68999999995
Q ss_pred Ch
Q 042102 210 TE 211 (317)
Q Consensus 210 ~~ 211 (317)
..
T Consensus 100 ~~ 101 (438)
T 3btv_A 100 AS 101 (438)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 350
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.45 E-value=0.047 Score=49.09 Aligned_cols=38 Identities=29% Similarity=0.253 Sum_probs=33.7
Q ss_pred ccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 144 TKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
..+.||++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999997 6899999999999999998887764
No 351
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.45 E-value=0.019 Score=53.21 Aligned_cols=95 Identities=15% Similarity=0.234 Sum_probs=61.1
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------------C--ccccCCHHHhcccCCEEEEe
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------------N--YKYYPNLIDLASNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDvV~~~ 206 (317)
....++|+|||.|.+|..+|..+...|. ++..+|....... . .....+.+ .++.||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999998877776 8999997643210 0 01123444 58999999988
Q ss_pred ccCCh---hhh-cccc---------HHHHhccCCCcEEEEeCCCcccCH
Q 042102 207 CSLTE---ETQ-HIVN---------RQVINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 207 lp~~~---~t~-~li~---------~~~l~~mk~gavlVN~~rg~~vd~ 242 (317)
..... .++ .++. .+.+....|++++++++. .+|.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN--Pvdi 141 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN--PVDI 141 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS--SHHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC--hHHH
Confidence 54321 122 1221 123344578999999974 4543
No 352
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.44 E-value=0.019 Score=52.20 Aligned_cols=67 Identities=10% Similarity=-0.060 Sum_probs=49.2
Q ss_pred cccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-------Ccc-------ccCCHHHhcc--cCCEEEE
Q 042102 143 TTKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-------NYK-------YYPNLIDLAS--NCQILVV 205 (317)
Q Consensus 143 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------~~~-------~~~~l~el~~--~aDvV~~ 205 (317)
...+.|++|.|.|. |.||+.+++.|...|++|.+.+|...... ... ...++.++++ .+|+|+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 46789999999997 99999999999999999998887543211 111 0123556677 8998887
Q ss_pred eccC
Q 042102 206 ACSL 209 (317)
Q Consensus 206 ~lp~ 209 (317)
+...
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 7654
No 353
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.42 E-value=0.033 Score=51.69 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=42.2
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCccc-----------------cCCHHHhcccCCEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNYKY-----------------YPNLIDLASNCQIL 203 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~~~-----------------~~~l~el~~~aDvV 203 (317)
.+|||+|+|.||+.+++.+... ++++. +.+++.... .+... ..+++++++++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 3799999999999999998765 46764 556543221 01111 11344566789999
Q ss_pred EEeccCCh
Q 042102 204 VVACSLTE 211 (317)
Q Consensus 204 ~~~lp~~~ 211 (317)
+.|+|...
T Consensus 82 ~~aTp~~~ 89 (340)
T 1b7g_O 82 VDTTPNGV 89 (340)
T ss_dssp EECCSTTH
T ss_pred EECCCCch
Confidence 99998654
No 354
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=95.41 E-value=0.013 Score=50.45 Aligned_cols=91 Identities=15% Similarity=0.103 Sum_probs=59.2
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhc---ccCCEEEEeccCCh---------
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLA---SNCQILVVACSLTE--------- 211 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~---~~aDvV~~~lp~~~--------- 211 (317)
.+.||++.|.|. |.||+++|+.|...|++|.+.+|+... +.....++++++ ...|+++.+.....
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~ 80 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL--DISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVE 80 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTC--CTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCccc--CCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCC
Confidence 367899999997 689999999999999999999886541 121122333333 46798887654321
Q ss_pred -h-hhcc----------ccHHHHhccCCCcEEEEeCCC
Q 042102 212 -E-TQHI----------VNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 212 -~-t~~l----------i~~~~l~~mk~gavlVN~~rg 237 (317)
+ .+.. +.+..++.|+++..+||++..
T Consensus 81 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 81 VTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 0 0000 123455678888899999863
No 355
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.40 E-value=0.019 Score=52.11 Aligned_cols=36 Identities=25% Similarity=0.211 Sum_probs=32.0
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEK 182 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~ 182 (317)
.|++|.|.|. |.||+.+++.|...|++|.+.+|+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 5789999998 99999999999999999999988654
No 356
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.39 E-value=0.0094 Score=55.77 Aligned_cols=86 Identities=19% Similarity=0.263 Sum_probs=60.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc---cCC---HHHhcccCCEEEEeccCChhhhc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY---YPN---LIDLASNCQILVVACSLTEETQH 215 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~---~~~---l~el~~~aDvV~~~lp~~~~t~~ 215 (317)
.|.+|.|+|.|.+|..+++.++.+|++|++.+++++.. .+... ..+ .+++....|+|+-++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 47899999999999999999999999998888765432 11111 111 22333567888888764321
Q ss_pred cccHHHHhccCCCcEEEEeCCC
Q 042102 216 IVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~rg 237 (317)
-+..++.++++..+|.++..
T Consensus 271 --~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCCC
T ss_pred --HHHHHHHhccCCEEEEeccC
Confidence 24567788889888888753
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.39 E-value=0.0096 Score=54.88 Aligned_cols=86 Identities=16% Similarity=0.203 Sum_probs=60.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc-----cCCHHHhc----ccCCEEEEeccCChh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY-----YPNLIDLA----SNCQILVVACSLTEE 212 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~-----~~~l~el~----~~aDvV~~~lp~~~~ 212 (317)
.|++|.|+|.|.+|..+++.++.+|++|++.++++... .+... ..++.+.+ ...|+|+.+....+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 47899999999999999999999999999998765321 12111 11232222 468888887653222
Q ss_pred hhccccHHHHhccCCCcEEEEeCCC
Q 042102 213 TQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
-+..++.|+++..+|.++..
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCCC
T ss_pred -----HHHHHHHhhcCCEEEEeccc
Confidence 24567788999999988753
No 358
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.38 E-value=0.04 Score=51.31 Aligned_cols=85 Identities=11% Similarity=0.149 Sum_probs=57.4
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc----c---CCHHHhcc-----cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY----Y---PNLIDLAS-----NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~el~~-----~aDvV~~~lp 208 (317)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++++.. .+... . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 57899999999999999999999999 899988765432 12111 1 12333222 4788877765
Q ss_pred CChhhhccccHHHHhccCCC-cEEEEeCC
Q 042102 209 LTEETQHIVNRQVINALGPK-GVLINIGR 236 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~g-avlVN~~r 236 (317)
..+. -...++.++++ ..+|.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RLDT-----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CHHH-----HHHHHHHBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEecc
Confidence 3221 14556778888 88887763
No 359
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.38 E-value=0.0073 Score=54.45 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=33.6
Q ss_pred cccCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 145 KFTGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 145 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
.+.|+++.|+| .|.+|+++++.|...|++|.+.+|+.
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 46789999999 99999999999999999999888864
No 360
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.35 E-value=0.015 Score=53.18 Aligned_cols=67 Identities=10% Similarity=0.031 Sum_probs=45.9
Q ss_pred cccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-C-----CccccCCHHHhcccCCEEEEeccC
Q 042102 143 TTKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-L-----NYKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 143 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-~-----~~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
.....+++|.|.|. |.||+.+++.|...|++|.+.+|..... . +.....++.++++.+|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 45688999999998 9999999999999999999988875431 1 111123466788899998877554
No 361
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.28 E-value=0.039 Score=50.46 Aligned_cols=35 Identities=23% Similarity=0.099 Sum_probs=30.6
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
..++|.|.|. |.||+.+++.|...|.+|.+.+|+.
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3679999998 9999999999999999999988865
No 362
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.27 E-value=0.041 Score=53.07 Aligned_cols=91 Identities=14% Similarity=0.278 Sum_probs=65.6
Q ss_pred ccccCCeEEEEecC----------hhHHHHHHHHhhCCCEEEEeCCCCCCC----C--CccccCCHHHhcccCCEEEEec
Q 042102 144 TKFTGKSVGILGMG----------RIGTAIAKRAEAFDCIIGYNSRTEKPN----L--NYKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 144 ~~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~----~--~~~~~~~l~el~~~aDvV~~~l 207 (317)
..+.|++|+|+|+- .-...+++.|...|++|.+||+..... . ......++++.++.+|.|++++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t 393 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVT 393 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECS
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEcc
Confidence 34689999999984 346889999999999999999876321 1 1234467889999999999998
Q ss_pred cCChhhhccccHHHHh-ccCCCcEEEEeCCCc
Q 042102 208 SLTEETQHIVNRQVIN-ALGPKGVLINIGRGL 238 (317)
Q Consensus 208 p~~~~t~~li~~~~l~-~mk~gavlVN~~rg~ 238 (317)
...+ -+. ++-+.+. .|+ +.+++|+ |+-
T Consensus 394 ~~~~-f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 394 EWKE-FRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp CCGG-GSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred CCHH-Hhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 7653 222 4544444 465 6788995 544
No 363
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.27 E-value=0.015 Score=50.51 Aligned_cols=63 Identities=14% Similarity=0.101 Sum_probs=44.2
Q ss_pred CCeEEEEecChhHHHHHHHH--hhCCCEEE-EeCCCCC-CC-----CCcc--ccCCHHHhccc--CCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRA--EAFDCIIG-YNSRTEK-PN-----LNYK--YYPNLIDLASN--CQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l--~~~G~~V~-~~~~~~~-~~-----~~~~--~~~~l~el~~~--aDvV~~~lp~~ 210 (317)
..+++|+|.|++|+.+++.+ ...|+++. ++|..+. .. .+.. ...++++++++ .|.+++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 45899999999999999973 45678764 6676655 21 1111 24567888764 89999999854
No 364
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.24 E-value=0.0091 Score=55.20 Aligned_cols=85 Identities=18% Similarity=0.227 Sum_probs=56.4
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCcc-----ccCCHHHhc------ccCCEEEEeccC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYK-----YYPNLIDLA------SNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~-----~~~~l~el~------~~aDvV~~~lp~ 209 (317)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++++.. .+.. ...++.+.+ ...|+|+-++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 899988765321 1111 012232222 146777777653
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
.+. -...++.++++..+|.++.
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEcc
Confidence 221 1345666777777777764
No 365
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.24 E-value=0.02 Score=53.43 Aligned_cols=83 Identities=10% Similarity=0.087 Sum_probs=50.9
Q ss_pred CeEEEEe-cChhHHHHHHHHhhCC-CEEEEeC--CCCCCC-C----C-------------ccc-cCCHHHhcc-cCCEEE
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAFD-CIIGYNS--RTEKPN-L----N-------------YKY-YPNLIDLAS-NCQILV 204 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~--~~~~~~-~----~-------------~~~-~~~l~el~~-~aDvV~ 204 (317)
.+|||+| .|.+|+.+++.|.... ++|.+.. +..... . + ... ..+++++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 9999999999997654 5775543 321111 0 0 000 114455556 899999
Q ss_pred EeccCChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 205 VACSLTEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 205 ~~lp~~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
+|+|...... + -+.. ++.|..+|+.+-
T Consensus 89 ~atp~~~~~~-~-a~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDLAKK-F-EPEF---AKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHHHHH-H-HHHH---HHTTCEEEECCS
T ss_pred ECCCchHHHH-H-HHHH---HHCCCEEEECCc
Confidence 9998543211 1 1222 356888898864
No 366
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.24 E-value=0.0083 Score=56.46 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=48.2
Q ss_pred CeEEEEecC-hhHHHHHHHHhhC-CCEEE-EeCCCCCCC------CCccccCCHHHhccc--CCEEEEeccCCh
Q 042102 149 KSVGILGMG-RIGTAIAKRAEAF-DCIIG-YNSRTEKPN------LNYKYYPNLIDLASN--CQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G-~iG~~~a~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~el~~~--aDvV~~~lp~~~ 211 (317)
.+|||||+| .+|+..+..++.. ++++. ++|+++... .+...+.+++++++. .|+|++++|...
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQF 76 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHH
Confidence 489999999 9999999988775 56764 678765432 133456789999875 999999999654
No 367
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.24 E-value=0.016 Score=52.41 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=55.9
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc---c---CCHHHhcccCCEEEEeccCChhhh
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY---Y---PNLIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~---~---~~l~el~~~aDvV~~~lp~~~~t~ 214 (317)
.|++|.|+|. |.+|+.+++.++.+|++|++.+++++.. .+... . .++.+.+...|+++- ... +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4789999998 9999999999999999999888765432 12111 1 112223356787777 553 1
Q ss_pred ccccHHHHhccCCCcEEEEeCC
Q 042102 215 HIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~r 236 (317)
.-...++.|+++..+|.++.
T Consensus 200 --~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC--
T ss_pred --HHHHHHHhhccCCEEEEEeC
Confidence 12456777888888887764
No 368
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.24 E-value=0.01 Score=56.21 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=46.5
Q ss_pred CeEEEEecChhHHHHHHHHhhC---------CCEEE-EeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF---------DCIIG-YNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~---------G~~V~-~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~ 209 (317)
.+|||||+|.||+.-++.++.. +++|. ++|+++... .+. ..+.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999888877653 45654 678765432 122 34678999986 57999999996
Q ss_pred Chh
Q 042102 210 TEE 212 (317)
Q Consensus 210 ~~~ 212 (317)
...
T Consensus 107 ~~H 109 (412)
T 4gqa_A 107 HLH 109 (412)
T ss_dssp GGH
T ss_pred HHH
Confidence 543
No 369
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.23 E-value=0.12 Score=49.25 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=70.1
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEE-EeCCCC-----CCC-----------CC-cc-ccCCHHHh-cccCCE
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRTE-----KPN-----------LN-YK-YYPNLIDL-ASNCQI 202 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~-----~~~-----------~~-~~-~~~~l~el-~~~aDv 202 (317)
+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+. +.. .+ .. +..+-+++ -..||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 346899999999999999999999999999987 555421 100 00 00 00111233 347998
Q ss_pred EEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 203 LVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 203 V~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++-|.. .+.|+.+.-+.++ =.+++.-+.+.+- .++ .+.|.+..|.
T Consensus 293 liP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PEA-EAYLLGKGAL 337 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HHH-HHHHHHHTCE
T ss_pred EEeccc-----ccccccchHhhCC-ceEEEECCCCcCC-HHH-HHHHHHCCCE
Confidence 888843 5567888777775 3578888888864 333 3566666665
No 370
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.23 E-value=0.044 Score=50.99 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=59.2
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc----c---CCHHHhcc-----cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY----Y---PNLIDLAS-----NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~el~~-----~aDvV~~~lp 208 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .+... . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 899888765432 12211 1 23333322 4798888765
Q ss_pred CChhhhccccHHHHhccCCC-cEEEEeCC
Q 042102 209 LTEETQHIVNRQVINALGPK-GVLINIGR 236 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~g-avlVN~~r 236 (317)
..+ + -...++.++++ ..+|.++-
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RIE-T----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECCC
T ss_pred CHH-H----HHHHHHHHhcCCCEEEEEcc
Confidence 322 1 14567788988 88888874
No 371
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.23 E-value=0.02 Score=52.79 Aligned_cols=86 Identities=13% Similarity=0.159 Sum_probs=59.6
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc----c--cCCHHHhcc-----cCCEEEEeccC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK----Y--YPNLIDLAS-----NCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~----~--~~~l~el~~-----~aDvV~~~lp~ 209 (317)
.|++|.|+|. |.||+.+++.++..|++|++.+++.... .+.. . ..++.+.+. ..|+|+.+...
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4789999999 8999999999999999999888765431 1111 0 123443333 47888877653
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
.+. -+..++.|+++..+|+++..
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeCC
Confidence 221 24566778889999988753
No 372
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.21 E-value=0.0091 Score=53.81 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=42.3
Q ss_pred CCeEEEEec-ChhHHHHHHHHh-hCCCEEE-EeCCCCCCC-------------CCccccCCHHHhcccCCEEEEec
Q 042102 148 GKSVGILGM-GRIGTAIAKRAE-AFDCIIG-YNSRTEKPN-------------LNYKYYPNLIDLASNCQILVVAC 207 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~-~~G~~V~-~~~~~~~~~-------------~~~~~~~~l~el~~~aDvV~~~l 207 (317)
.++|+|+|+ |.||+.+++.+. .-|+++. ++++..... .+.....++++++..+|+|+-..
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 358999999 999999999876 4577765 677654321 01122456788888999999443
No 373
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.19 E-value=0.048 Score=52.72 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=65.5
Q ss_pred cccCCeEEEEecCh----------hHHHHHHHHhhCCCEEEEeCCCCCCCC------------------CccccCCHHHh
Q 042102 145 KFTGKSVGILGMGR----------IGTAIAKRAEAFDCIIGYNSRTEKPNL------------------NYKYYPNLIDL 196 (317)
Q Consensus 145 ~l~g~~vgIiG~G~----------iG~~~a~~l~~~G~~V~~~~~~~~~~~------------------~~~~~~~l~el 196 (317)
.+.|++|+|+|+.- -...+++.|...|++|.+||+...... ......+..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 36799999999864 788999999999999999999643210 11223578889
Q ss_pred cccCCEEEEeccCChhhhccccHHHH-hccCCCcEEEEeCCCc
Q 042102 197 ASNCQILVVACSLTEETQHIVNRQVI-NALGPKGVLINIGRGL 238 (317)
Q Consensus 197 ~~~aDvV~~~lp~~~~t~~li~~~~l-~~mk~gavlVN~~rg~ 238 (317)
++.+|.|++++...+ .+. ++.+.+ +.|+...+++|+ |+-
T Consensus 406 ~~~ad~~vi~t~~~~-f~~-~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTEWDM-FKE-LDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSCCGG-GGG-SCHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecCChh-hhc-CCHHHHHHhcCCCCEEEeC-CCc
Confidence 999999999988653 332 354444 567766668886 553
No 374
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.17 E-value=0.05 Score=50.68 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=57.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc----c---CCHHHhcc-----cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY----Y---PNLIDLAS-----NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~el~~-----~aDvV~~~lp 208 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .+... . .++.+.+. ..|+|+-+..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 57899999999999999999999999 899988765432 12111 1 22333222 4788877765
Q ss_pred CChhhhccccHHHHhccCCC-cEEEEeCC
Q 042102 209 LTEETQHIVNRQVINALGPK-GVLINIGR 236 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~g-avlVN~~r 236 (317)
..+ + -...++.++++ ..+|.++-
T Consensus 275 ~~~-~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQ-T----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECCC
T ss_pred CHH-H----HHHHHHHhhcCCCEEEEECC
Confidence 322 1 14566778888 88887764
No 375
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.16 E-value=0.014 Score=55.05 Aligned_cols=65 Identities=14% Similarity=0.112 Sum_probs=48.8
Q ss_pred CCeEEEEecCh---hHHHHHHHHhhCC-CEEE--EeCCCCCCC------CCc---cccCCHHHhccc-------CCEEEE
Q 042102 148 GKSVGILGMGR---IGTAIAKRAEAFD-CIIG--YNSRTEKPN------LNY---KYYPNLIDLASN-------CQILVV 205 (317)
Q Consensus 148 g~~vgIiG~G~---iG~~~a~~l~~~G-~~V~--~~~~~~~~~------~~~---~~~~~l~el~~~-------aDvV~~ 205 (317)
..+|||||+|. ||+..+..++..+ +++. ++|+++... .+. ..+.+++++++. .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 46899999999 9999888877665 6765 568765432 233 456789999875 999999
Q ss_pred eccCChh
Q 042102 206 ACSLTEE 212 (317)
Q Consensus 206 ~lp~~~~ 212 (317)
++|....
T Consensus 92 ~tp~~~H 98 (398)
T 3dty_A 92 ATPNGTH 98 (398)
T ss_dssp ESCGGGH
T ss_pred CCCcHHH
Confidence 9997543
No 376
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.13 E-value=0.022 Score=52.85 Aligned_cols=85 Identities=24% Similarity=0.306 Sum_probs=60.6
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC------CCCccc---cCC---HHHhcccCCEEEEeccCChhhh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP------NLNYKY---YPN---LIDLASNCQILVVACSLTEETQ 214 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~------~~~~~~---~~~---l~el~~~aDvV~~~lp~~~~t~ 214 (317)
.|.+|.|+|.|.+|...++.++.+|++|++.+++.++ ..+... ..+ +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 5789999999999999999999999999988876543 122211 122 22333467998888764321
Q ss_pred ccccHHHHhccCCCcEEEEeCC
Q 042102 215 HIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 215 ~li~~~~l~~mk~gavlVN~~r 236 (317)
-...++.++++..+|.++.
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2456778899999999874
No 377
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.11 E-value=0.035 Score=51.00 Aligned_cols=106 Identities=16% Similarity=0.099 Sum_probs=66.6
Q ss_pred CCeEEEEecChhHHH-HHHHHhhCCCEEEEeCCCCCCC-------CCccc--cCCHHHhc-ccCCEEEEe--cc-CChhh
Q 042102 148 GKSVGILGMGRIGTA-IAKRAEAFDCIIGYNSRTEKPN-------LNYKY--YPNLIDLA-SNCQILVVA--CS-LTEET 213 (317)
Q Consensus 148 g~~vgIiG~G~iG~~-~a~~l~~~G~~V~~~~~~~~~~-------~~~~~--~~~l~el~-~~aDvV~~~--lp-~~~~t 213 (317)
.++|.|||.|.+|.+ +|+.|+..|++|.++|....+. .+... -.+.+++. .++|+|+.. +| .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 478999999999995 9999999999999999765321 12211 12344555 579998886 33 23322
Q ss_pred -----hc--cccH-HHHhc--cCCCcEE-EEeCCCcccCHHHHHHHHHhCC
Q 042102 214 -----QH--IVNR-QVINA--LGPKGVL-INIGRGLLVDEHELVSALLQGR 253 (317)
Q Consensus 214 -----~~--li~~-~~l~~--mk~gavl-VN~~rg~~vd~~aL~~al~~g~ 253 (317)
++ ++++ +.|.. ++...++ |--+.|..--..-+.+.|+...
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 11 3333 33332 3433344 4445788777777777787644
No 378
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.11 E-value=0.024 Score=52.40 Aligned_cols=106 Identities=9% Similarity=0.040 Sum_probs=64.2
Q ss_pred CeEEEEecChhHHHHHHHHhhC--------CCEE-EEeCCCCCCCCC---------------c-cccC---CHHHhc-cc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF--------DCII-GYNSRTEKPNLN---------------Y-KYYP---NLIDLA-SN 199 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~--------G~~V-~~~~~~~~~~~~---------------~-~~~~---~l~el~-~~ 199 (317)
.+|||||+|.||+.+++.+... +++| .+++++...... . .... ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 5899999999999999988653 3565 466765432211 1 0223 788877 46
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCccc-CHHHHHHHHHhCCce
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLV-DEHELVSALLQGRLG 255 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~v-d~~aL~~al~~g~i~ 255 (317)
.|+|+.++|.. .+...--+-..+.++.|.-+|...-..+. +.+.|.++.++....
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999975 11111112334556677666654333332 345677766665543
No 379
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.10 E-value=0.017 Score=53.68 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=42.7
Q ss_pred CeEEEEecChhHHHHHHHHhh-CCCEEEE-eCCCCCCC------CC------------------ccccCCHHHhcccCCE
Q 042102 149 KSVGILGMGRIGTAIAKRAEA-FDCIIGY-NSRTEKPN------LN------------------YKYYPNLIDLASNCQI 202 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~~-~~~~~~~~------~~------------------~~~~~~l~el~~~aDv 202 (317)
.+|||+|+|.||+.+++.|.. -++++.+ .++.+... .+ .....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999999876 4677654 44432210 00 0001245677789999
Q ss_pred EEEeccCCh
Q 042102 203 LVVACSLTE 211 (317)
Q Consensus 203 V~~~lp~~~ 211 (317)
|+.|+|...
T Consensus 82 V~~atp~~~ 90 (337)
T 1cf2_P 82 VIDCTPEGI 90 (337)
T ss_dssp EEECCSTTH
T ss_pred EEECCCchh
Confidence 999999654
No 380
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.08 E-value=0.015 Score=53.60 Aligned_cols=85 Identities=24% Similarity=0.178 Sum_probs=57.8
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCCC---C-ccc-----cCCHHHhcc-----cCCEEEEeccCCh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPNL---N-YKY-----YPNLIDLAS-----NCQILVVACSLTE 211 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---~-~~~-----~~~l~el~~-----~aDvV~~~lp~~~ 211 (317)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++.+... . ... ..++.+.+. ..|+|+-+....+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 68899999999999999999999999 8999887643210 0 110 113333322 4788877765322
Q ss_pred hhhccccHHHHhccCCCcEEEEeCC
Q 042102 212 ETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 212 ~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
. -+..++.|+++..+|.++.
T Consensus 244 ~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 A-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp H-----HHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhcCCEEEEEec
Confidence 1 1455677888888888764
No 381
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.08 E-value=0.046 Score=50.82 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=58.6
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCcc----cc---CCHHHhcc-----cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYK----YY---PNLIDLAS-----NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~----~~---~~l~el~~-----~aDvV~~~lp 208 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .+.. .. .++.+.+. ..|+|+-+..
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 899988765432 1111 01 23333322 4788887765
Q ss_pred CChhhhccccHHHHhccCCC-cEEEEeCC
Q 042102 209 LTEETQHIVNRQVINALGPK-GVLINIGR 236 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~g-avlVN~~r 236 (317)
..+. -...++.++++ ..+|.++-
T Consensus 270 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVKV-----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred cHHH-----HHHHHHhhccCCcEEEEEec
Confidence 3221 24567788888 88888764
No 382
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.04 E-value=0.023 Score=53.80 Aligned_cols=63 Identities=16% Similarity=0.386 Sum_probs=44.8
Q ss_pred ccccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC----CC--cc---ccC---CHHHhcccCCEEEE
Q 042102 142 MTTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LN--YK---YYP---NLIDLASNCQILVV 205 (317)
Q Consensus 142 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~--~~---~~~---~l~el~~~aDvV~~ 205 (317)
++....+++|+|+|-|..|+.+++.++.+|++|.+++ ..... .. .. .+. .+.++++++|+|+.
T Consensus 18 ~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp ---CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred eccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 4556778999999999999999999999999998877 44321 11 11 112 25677889998864
No 383
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.04 E-value=0.014 Score=53.96 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=48.1
Q ss_pred CeEEEEecC-hhHHHHHHHHhhC--CCEE-EEeCCCCCCC------CCc-cccCCHHHhcc--cCCEEEEeccCCh
Q 042102 149 KSVGILGMG-RIGTAIAKRAEAF--DCII-GYNSRTEKPN------LNY-KYYPNLIDLAS--NCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G-~iG~~~a~~l~~~--G~~V-~~~~~~~~~~------~~~-~~~~~l~el~~--~aDvV~~~lp~~~ 211 (317)
.+|||||+| .+|+..+..++.. ++++ .++|+++... .+. ..+.+++++++ +.|+|++++|...
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 94 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVEL 94 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGG
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchH
Confidence 489999999 8999999999876 5676 5778765432 122 34678999986 5899999999654
No 384
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.04 E-value=0.031 Score=51.61 Aligned_cols=86 Identities=17% Similarity=0.182 Sum_probs=59.8
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc----cc--CC-HHH---hc-----ccCCEEEEe
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK----YY--PN-LID---LA-----SNCQILVVA 206 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~----~~--~~-l~e---l~-----~~aDvV~~~ 206 (317)
.|.+|.|+|.|.+|..+++.++.+|++|++.+++++.. .+.. .. .+ .++ .. ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 47899999999999999999999999998887664321 1211 11 12 222 22 258999888
Q ss_pred ccCChhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 207 CSLTEETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 207 lp~~~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
...... -...++.++++..+|.++.+
T Consensus 248 ~g~~~~-----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEKC-----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCHHH-----HHHHHHHHhcCCEEEEEecC
Confidence 764221 14567889999999998753
No 385
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.03 E-value=0.034 Score=51.94 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=24.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEEEeC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIGYNS 178 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~ 178 (317)
.+|||+|+|.||+.+.+.|... +++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 4899999999999999998765 57765443
No 386
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.02 E-value=0.026 Score=51.67 Aligned_cols=93 Identities=18% Similarity=0.184 Sum_probs=58.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCC--CEEEEeCCCCCCCC--------------CccccCCHHHhcccCCEEEEeccCChh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFD--CIIGYNSRTEKPNL--------------NYKYYPNLIDLASNCQILVVACSLTEE 212 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G--~~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDvV~~~lp~~~~ 212 (317)
++|+|||.|.+|..++..+...+ -++..+|...++.. ......+-.+.++.||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 48999999999999999998766 37888987643210 001111236779999999998764322
Q ss_pred ---h--------hcccc--HHHHhccCCCcEEEEeCCCcccCHH
Q 042102 213 ---T--------QHIVN--RQVINALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 213 ---t--------~~li~--~~~l~~mk~gavlVN~~rg~~vd~~ 243 (317)
+ ..++. .+.+....|+++++++ ..++|.-
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~ 122 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA--TNPVDVM 122 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC--SSSHHHH
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe--cCchHHH
Confidence 1 11110 1122333789999998 4455443
No 387
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.02 E-value=0.041 Score=50.89 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=59.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc---cC-----CHH-Hhc----ccCCEEEEec
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY---YP-----NLI-DLA----SNCQILVVAC 207 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~---~~-----~l~-el~----~~aDvV~~~l 207 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.... .+... .. ++. ++. ...|+|+-+.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 899888765421 12211 11 111 111 3589999887
Q ss_pred cCChhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 208 SLTEETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 208 p~~~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
..... -...++.++++..+|.++-+
T Consensus 251 g~~~~-----~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAEAS-----IQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred CChHH-----HHHHHHHhcCCCEEEEEecC
Confidence 63221 14567889999999998753
No 388
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.01 E-value=0.02 Score=53.37 Aligned_cols=65 Identities=8% Similarity=0.121 Sum_probs=47.6
Q ss_pred cCCeEEEEecChhHH-HHHHHHhhCCCEE-EEeCCCCCCC------CC-ccccCCHHHhccc--CCEEEEeccCCh
Q 042102 147 TGKSVGILGMGRIGT-AIAKRAEAFDCII-GYNSRTEKPN------LN-YKYYPNLIDLASN--CQILVVACSLTE 211 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~-~~a~~l~~~G~~V-~~~~~~~~~~------~~-~~~~~~l~el~~~--aDvV~~~lp~~~ 211 (317)
...+|||||+|.+|. ..+..++.-|+++ .++|+++... .+ ...+.+++++++. .|+|++++|...
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 100 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSE 100 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHH
Confidence 346899999999995 5677777778885 4778775432 11 3346799999875 899999998543
No 389
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.00 E-value=0.023 Score=52.92 Aligned_cols=98 Identities=18% Similarity=0.225 Sum_probs=61.5
Q ss_pred ccCCeEEEEec-ChhHHHHHHHHhhCCC--EEEEeCCCCCCCC--------------CccccCCHHHhcccCCEEEEecc
Q 042102 146 FTGKSVGILGM-GRIGTAIAKRAEAFDC--IIGYNSRTEKPNL--------------NYKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDvV~~~lp 208 (317)
+.+++|+|||. |.+|+.+|..+..+|. +|..+|...+... ......+..+.++.||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 45789999998 9999999998887774 7888887543210 11123577888999999999853
Q ss_pred CChhhhcc-----c--cH-------HHHhccCCCcE-EEEeCCCcccCHHHHH
Q 042102 209 LTEETQHI-----V--NR-------QVINALGPKGV-LINIGRGLLVDEHELV 246 (317)
Q Consensus 209 ~~~~t~~l-----i--~~-------~~l~~mk~gav-lVN~~rg~~vd~~aL~ 246 (317)
. +...++ + |. +.+....|+++ +++++ ..+|.-..+
T Consensus 86 ~-p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs--NPvd~~t~i 135 (343)
T 3fi9_A 86 A-PRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF--NPADITGLV 135 (343)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS--SSHHHHHHH
T ss_pred C-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec--CchHHHHHH
Confidence 2 211111 1 11 12333457785 88885 556554443
No 390
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.00 E-value=0.37 Score=44.94 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=65.3
Q ss_pred ccccCCeEEEEecC--hhHHHHHHHHhhCCCEEEEeCCCCCCC----------------CCccccCCHHHhcccCCEEEE
Q 042102 144 TKFTGKSVGILGMG--RIGTAIAKRAEAFDCIIGYNSRTEKPN----------------LNYKYYPNLIDLASNCQILVV 205 (317)
Q Consensus 144 ~~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~~~~~~~l~el~~~aDvV~~ 205 (317)
..+.|++|++||=| ++.++.+..+..||++|.+..+..-.. .......+++|.++.+|+|..
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt 256 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYT 256 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEE
T ss_pred CCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEE
Confidence 35889999999954 799999999999999999887643111 012235789999999999875
Q ss_pred eccC----Chh---------hhccccHHHHhcc-CCCcEEEEeC
Q 042102 206 ACSL----TEE---------TQHIVNRQVINAL-GPKGVLINIG 235 (317)
Q Consensus 206 ~lp~----~~~---------t~~li~~~~l~~m-k~gavlVN~~ 235 (317)
-.=. .++ ...-++.+.++.+ ||+++|.-+.
T Consensus 257 ~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 257 DVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 3211 111 1234678888764 7889988875
No 391
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.00 E-value=0.41 Score=44.63 Aligned_cols=89 Identities=9% Similarity=0.044 Sum_probs=64.4
Q ss_pred ccCCe--EEEEec---C--hhHHHHHHHHhhCCCEEEEeCCC-C-CCCC---------------CccccCCHHHhcccCC
Q 042102 146 FTGKS--VGILGM---G--RIGTAIAKRAEAFDCIIGYNSRT-E-KPNL---------------NYKYYPNLIDLASNCQ 201 (317)
Q Consensus 146 l~g~~--vgIiG~---G--~iG~~~a~~l~~~G~~V~~~~~~-~-~~~~---------------~~~~~~~l~el~~~aD 201 (317)
+.|++ |+++|= | ++.++.+..+..||++|.+..+. . .... ......+++|+++++|
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aD 267 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGAD 267 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCS
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCC
Confidence 78999 999997 3 89999999999999999888765 2 1110 1123468999999999
Q ss_pred EEEEeccCC-----h-----h-----hhccccHHHHhccCCCcEEEEeC
Q 042102 202 ILVVACSLT-----E-----E-----TQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 202 vV~~~lp~~-----~-----~-----t~~li~~~~l~~mk~gavlVN~~ 235 (317)
+|..-.=.. . + ....++.+.++.+| +++|.-+.
T Consensus 268 vVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 268 VVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp EEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred EEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 987754211 1 0 12346788888888 88888775
No 392
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=94.99 E-value=0.023 Score=54.85 Aligned_cols=110 Identities=9% Similarity=0.041 Sum_probs=68.5
Q ss_pred CCeEEEEecChh-HHHHHHHHhh----C-CCEEEEeCCCC--CCC---------------CC--ccccCCHHHhcccCCE
Q 042102 148 GKSVGILGMGRI-GTAIAKRAEA----F-DCIIGYNSRTE--KPN---------------LN--YKYYPNLIDLASNCQI 202 (317)
Q Consensus 148 g~~vgIiG~G~i-G~~~a~~l~~----~-G~~V~~~~~~~--~~~---------------~~--~~~~~~l~el~~~aDv 202 (317)
.++|+|||.|.. |..++..|.. + +-+|..||+.+ +.. .. .....++.+.++.||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 358999999999 8876655543 3 45799999876 321 01 1123578889999999
Q ss_pred EEEeccCChh---hh--------cc--------------------cc--HHHHhccCCCcEEEEeCCCcccCHHHHHHHH
Q 042102 203 LVVACSLTEE---TQ--------HI--------------------VN--RQVINALGPKGVLINIGRGLLVDEHELVSAL 249 (317)
Q Consensus 203 V~~~lp~~~~---t~--------~l--------------------i~--~~~l~~mk~gavlVN~~rg~~vd~~aL~~al 249 (317)
|+++.|.... ++ ++ +. .+.+....|+++++|++-.-=+-..++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999985321 11 11 10 1233445689999999765544445555543
Q ss_pred HhCCceEE
Q 042102 250 LQGRLGGA 257 (317)
Q Consensus 250 ~~g~i~ga 257 (317)
...++.|.
T Consensus 167 p~~rViG~ 174 (450)
T 1s6y_A 167 KQEKVVGL 174 (450)
T ss_dssp CCCCEEEC
T ss_pred CCCCEEEe
Confidence 33355544
No 393
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.98 E-value=0.044 Score=51.12 Aligned_cols=85 Identities=16% Similarity=0.187 Sum_probs=56.8
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc-------cCCHHHhcc-----cCCEEEEecc
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY-------YPNLIDLAS-----NCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~-------~~~l~el~~-----~aDvV~~~lp 208 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. ..++.+.+. ..|+|+-+..
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 57899999999999999999999999 799998766532 12111 122333222 3787777765
Q ss_pred CChhhhccccHHHHhccCCC-cEEEEeCC
Q 042102 209 LTEETQHIVNRQVINALGPK-GVLINIGR 236 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~mk~g-avlVN~~r 236 (317)
..+. -...++.+++| ..++.++-
T Consensus 273 ~~~~-----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NVSV-----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhccCCEEEEEcc
Confidence 3221 14556777885 77777763
No 394
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.98 E-value=0.063 Score=49.18 Aligned_cols=94 Identities=18% Similarity=0.273 Sum_probs=60.2
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCC--CEEEEeCCCCCCC---------CC--ccc---cCCHHHhcccCCEEEEeccCCh
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFD--CIIGYNSRTEKPN---------LN--YKY---YPNLIDLASNCQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G--~~V~~~~~~~~~~---------~~--~~~---~~~l~el~~~aDvV~~~lp~~~ 211 (317)
++|+|+|. |.+|+.++..|...| -+|..+|..+... .. ... ..++++.++.||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 48999998 999999999998777 5788888765110 00 111 1357888999999999865322
Q ss_pred h---hh-ccc--c----H---HHHhccCCCcEEEEeCCCcccCHHH
Q 042102 212 E---TQ-HIV--N----R---QVINALGPKGVLINIGRGLLVDEHE 244 (317)
Q Consensus 212 ~---t~-~li--~----~---~~l~~mk~gavlVN~~rg~~vd~~a 244 (317)
. ++ .++ | . +.+....|++++|++ ..++|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 1 11 111 1 1 122233588999997 45666544
No 395
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.98 E-value=0.021 Score=50.57 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=33.3
Q ss_pred cccCCeEEEEe---cChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 145 KFTGKSVGILG---MGRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 145 ~l~g~~vgIiG---~G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
.+.||++.|.| .|.||+++|+.|...|++|+..+++.
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 47899999999 49999999999999999999888765
No 396
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.93 E-value=0.058 Score=48.12 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.5
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
.++|.|.|. |.+|+.+++.|...|.+|.+.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 468999996 9999999999999999999888864
No 397
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.90 E-value=0.055 Score=49.85 Aligned_cols=88 Identities=14% Similarity=0.174 Sum_probs=57.2
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCC-------EEEEeCCC----CCCC--------C---Cc----cccCCHHHhcccC
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDC-------IIGYNSRT----EKPN--------L---NY----KYYPNLIDLASNC 200 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~-------~V~~~~~~----~~~~--------~---~~----~~~~~l~el~~~a 200 (317)
.++|+|+|. |.+|+.++..|...|+ +|..+|+. .+.. . .. ....++.+.++.|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 358999998 9999999999987775 78888876 2100 0 11 1135788999999
Q ss_pred CEEEEeccCChh---hhc-cc--c----H---HHHhcc-CCCcEEEEeC
Q 042102 201 QILVVACSLTEE---TQH-IV--N----R---QVINAL-GPKGVLINIG 235 (317)
Q Consensus 201 DvV~~~lp~~~~---t~~-li--~----~---~~l~~m-k~gavlVN~~ 235 (317)
|+|+.+...... ++. ++ | . +.+... ++.+++|+++
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 999887543221 110 11 1 1 122333 4789999997
No 398
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.90 E-value=0.037 Score=52.22 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=58.9
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc-----cCCHHH----hc--ccCCEEEEecc
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY-----YPNLID----LA--SNCQILVVACS 208 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~-----~~~l~e----l~--~~aDvV~~~lp 208 (317)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++++.+. .++.. ..++.+ +. ...|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 358899999999999999999999999 899988765432 11110 122322 22 24899988877
Q ss_pred CChhhhccccHHHHhcc----CCCcEEEEeCC
Q 042102 209 LTEETQHIVNRQVINAL----GPKGVLINIGR 236 (317)
Q Consensus 209 ~~~~t~~li~~~~l~~m----k~gavlVN~~r 236 (317)
....+. ...++.+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 542222 2333444 99999999874
No 399
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.90 E-value=0.037 Score=51.65 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=32.4
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCC
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRT 180 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~ 180 (317)
..|++++|.|||+|.+|..+++.|...|. ++..+|+.
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 46889999999999999999999999997 67777654
No 400
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.85 E-value=0.036 Score=49.15 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=45.7
Q ss_pred CeEEEEe-cChhHHHHHHHHhhC-CCEEEEeCCCCCCCC-----Ccc-------ccCCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAF-DCIIGYNSRTEKPNL-----NYK-------YYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~-----~~~-------~~~~l~el~~~aDvV~~~lp~~ 210 (317)
++|.|.| .|.||+.+++.|... |.+|.+..|++.... +.. ...++.++++.+|+|+.+....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 4789999 499999999999887 899998887654321 111 1234667899999998876643
No 401
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.85 E-value=0.081 Score=46.46 Aligned_cols=37 Identities=16% Similarity=0.350 Sum_probs=32.5
Q ss_pred cccCCeEEEEecC-h--hHHHHHHHHhhCCCEEEEeCCCC
Q 042102 145 KFTGKSVGILGMG-R--IGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 145 ~l~g~~vgIiG~G-~--iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
++.||++.|.|.+ . ||+++|+.|...|++|+..+++.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 5789999999974 4 99999999999999998887764
No 402
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.81 E-value=0.01 Score=49.95 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.4
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
.|++|.|+| .|.||+.+++.++..|++|++.+++.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999 69999999999999999999888754
No 403
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.78 E-value=0.053 Score=53.48 Aligned_cols=81 Identities=20% Similarity=0.129 Sum_probs=58.5
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCc--------cccCCHHHh-cccCCEEEEeccCChhhhccccH
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNY--------KYYPNLIDL-ASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~--------~~~~~l~el-~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
+++.|+|+|.+|+.+|+.|...|..|.+.|.+++..... .....|+++ ++++|.++++.+.++. +++-.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~--ni~~~ 426 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDST--NIFLT 426 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHH--HHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCchH--HHHHH
Confidence 789999999999999999999999999998776543211 112234444 8899999999887643 44545
Q ss_pred HHHhccCCCcEE
Q 042102 220 QVINALGPKGVL 231 (317)
Q Consensus 220 ~~l~~mk~gavl 231 (317)
...+.+.+...+
T Consensus 427 ~~ak~l~~~~~i 438 (565)
T 4gx0_A 427 LACRHLHSHIRI 438 (565)
T ss_dssp HHHHHHCSSSEE
T ss_pred HHHHHHCCCCEE
Confidence 566666666333
No 404
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.71 E-value=0.044 Score=50.76 Aligned_cols=30 Identities=33% Similarity=0.396 Sum_probs=24.1
Q ss_pred CeEEEEecChhHHHHHHHHhh-CCCEEEE-eC
Q 042102 149 KSVGILGMGRIGTAIAKRAEA-FDCIIGY-NS 178 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~~-~~ 178 (317)
.+|||+|+|.||+.+++.+.. -+++|.+ .+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d 35 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIND 35 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecC
Confidence 489999999999999999865 4577654 44
No 405
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.71 E-value=0.019 Score=54.10 Aligned_cols=62 Identities=11% Similarity=0.065 Sum_probs=46.5
Q ss_pred CCeEEEEecChhHHHHHHHHhhC--CCEEE-EeCCCCCCC------CCccccCCHHHhcccCCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAF--DCIIG-YNSRTEKPN------LNYKYYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~--G~~V~-~~~~~~~~~------~~~~~~~~l~el~~~aDvV~~~lp~~ 210 (317)
..+|||||.| +|+.-++.++.. ++++. +++++.+.. .+...+.++++++++.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 4589999999 799878877765 57764 678776432 23445678999999999999999864
No 406
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.70 E-value=0.033 Score=51.72 Aligned_cols=83 Identities=11% Similarity=0.155 Sum_probs=51.9
Q ss_pred CeEEEEe-cChhHHHHHHHHhh-CCCEEEEe-CCC---CC-CC--------CC---ccccC--CHHHhcccCCEEEEecc
Q 042102 149 KSVGILG-MGRIGTAIAKRAEA-FDCIIGYN-SRT---EK-PN--------LN---YKYYP--NLIDLASNCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~-~G~~V~~~-~~~---~~-~~--------~~---~~~~~--~l~el~~~aDvV~~~lp 208 (317)
.+|+|+| .|.+|+.+.+.|.. -++++... +++ .. +. .+ ..... +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 4899999 69999999999987 34566543 333 11 10 01 11111 34555589999999999
Q ss_pred CChhhhccccHHHHh-ccCCCcEEEEeCCC
Q 042102 209 LTEETQHIVNRQVIN-ALGPKGVLINIGRG 237 (317)
Q Consensus 209 ~~~~t~~li~~~~l~-~mk~gavlVN~~rg 237 (317)
...+ ++..+ ..+.|+.+|+.|.-
T Consensus 85 ~~~s------~~~~~~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEVS------HDLAPQFLEAGCVVFDLSGA 108 (337)
T ss_dssp HHHH------HHHHHHHHHTTCEEEECSST
T ss_pred hHHH------HHHHHHHHHCCCEEEEcCCc
Confidence 4332 22222 24679999998753
No 407
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.70 E-value=0.074 Score=51.36 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=72.8
Q ss_pred cccCCeEEEEecC----hhHHHHHHHHhhCC-CEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccH
Q 042102 145 KFTGKSVGILGMG----RIGTAIAKRAEAFD-CIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNR 219 (317)
Q Consensus 145 ~l~g~~vgIiG~G----~iG~~~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~ 219 (317)
-++-++|+|||.+ .+|+.+.+.++..| ..|+.+++......+...+.++.++....|++++++|... +..++.
T Consensus 5 l~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp~~~-~~~~v~- 82 (457)
T 2csu_A 5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRF-VKDTLI- 82 (457)
T ss_dssp TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCHHH-HHHHHH-
T ss_pred hcCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecCHHH-HHHHHH-
Confidence 3567899999998 89999999999885 6788888775444555667888898889999999999432 233332
Q ss_pred HHHhccCCCcEEEEe-CCCcccC-----HHHHHHHHHhCCce
Q 042102 220 QVINALGPKGVLINI-GRGLLVD-----EHELVSALLQGRLG 255 (317)
Q Consensus 220 ~~l~~mk~gavlVN~-~rg~~vd-----~~aL~~al~~g~i~ 255 (317)
+..+ ..-..+++.. +-.+.-+ ++.+.+..++..+.
T Consensus 83 e~~~-~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 83 QCGE-KGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHHH-HTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHH-cCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 2222 2223333332 2223323 67788888877666
No 408
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.66 E-value=0.014 Score=54.31 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=32.5
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEK 182 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~ 182 (317)
.|.+|.|+|.|.+|...++.++.+|++|++.+++..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 224 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE 224 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCch
Confidence 578999999999999999999999999998887643
No 409
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.66 E-value=0.11 Score=50.23 Aligned_cols=105 Identities=9% Similarity=0.040 Sum_probs=63.5
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEE-EeCCC-----CCCC-------------------C-------Ccccc
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRT-----EKPN-------------------L-------NYKYY 190 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~-----~~~~-------------------~-------~~~~~ 190 (317)
+.++.|++|.|-|+|++|+.+|+.|...|++|+ +.|.+ ++.. . +....
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 446899999999999999999999999999987 44421 0000 0 00001
Q ss_pred CCHHHh-cccCCEEEEeccCChhhhccccHHHHhcc-CCC-cEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 191 PNLIDL-ASNCQILVVACSLTEETQHIVNRQVINAL-GPK-GVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 191 ~~l~el-~~~aDvV~~~lp~~~~t~~li~~~~l~~m-k~g-avlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
+.+++ -..||+++-|. +.+.|+.+....+ +.+ .+++--+-+.+ ..++ .+.|.+..|.
T Consensus 327 -~~~~~~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 -PNEKPWGVPCTLAFPCA-----TQNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp -SSCCTTSSCCSEEEECS-----STTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred -cCcCeeecCccEEEecc-----ccCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 11122 23688777664 2455666665555 122 34555556664 4444 5667777775
No 410
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.64 E-value=0.12 Score=47.17 Aligned_cols=89 Identities=18% Similarity=0.232 Sum_probs=61.0
Q ss_pred cccCCeEEEEec---ChhHHHHHHHHhhC-CCEEEEeCCCCCC-C---------CC--ccccCCHHHhcccCCEEEEecc
Q 042102 145 KFTGKSVGILGM---GRIGTAIAKRAEAF-DCIIGYNSRTEKP-N---------LN--YKYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 145 ~l~g~~vgIiG~---G~iG~~~a~~l~~~-G~~V~~~~~~~~~-~---------~~--~~~~~~l~el~~~aDvV~~~lp 208 (317)
.+.|.||++||= |++.++.+..+..| |++|.+..|..-. . .+ .....+++++++++|+|....-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~ 227 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRI 227 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCc
Confidence 378999999998 48999999999999 9999888764221 1 11 2235789999999999886421
Q ss_pred C-----C-hhh-----hccccHHHHhccCCCcEEEEeC
Q 042102 209 L-----T-EET-----QHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 209 ~-----~-~~t-----~~li~~~~l~~mk~gavlVN~~ 235 (317)
- + .+- ...++++.++. ++++|.-+.
T Consensus 228 q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~l 263 (306)
T 4ekn_B 228 QKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPL 263 (306)
T ss_dssp CGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCS
T ss_pred ccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCC
Confidence 1 1 110 13356666665 667766664
No 411
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=94.63 E-value=0.031 Score=48.99 Aligned_cols=93 Identities=16% Similarity=0.156 Sum_probs=58.4
Q ss_pred ccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCcc------ccCCHHHhcc-------cCCEEEEeccCC-
Q 042102 146 FTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYK------YYPNLIDLAS-------NCQILVVACSLT- 210 (317)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~------~~~~l~el~~-------~aDvV~~~lp~~- 210 (317)
.-||++.|.|. |.||+.+|+.|...|++|++.+|+........ ...+++++++ ..|+|+.+....
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 34789999996 67999999999999999999888765432111 1112333333 458888765421
Q ss_pred ------hhh----hcc----------ccHHHHhccCCCcEEEEeCCCc
Q 042102 211 ------EET----QHI----------VNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 211 ------~~t----~~l----------i~~~~l~~mk~gavlVN~~rg~ 238 (317)
..+ ... +.+..+..|+++..+||++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 111 011 1234556777788899998743
No 412
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.62 E-value=0.03 Score=51.40 Aligned_cols=85 Identities=16% Similarity=0.154 Sum_probs=57.7
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc-----cCCHHHhc----ccCCEEEEeccCChh
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY-----YPNLIDLA----SNCQILVVACSLTEE 212 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~-----~~~l~el~----~~aDvV~~~lp~~~~ 212 (317)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++. .+... ..++.+.+ ...|+++.+....+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 57899999999999999999999999999988765431 12110 12333222 257887776542221
Q ss_pred hhccccHHHHhccCCCcEEEEeCC
Q 042102 213 TQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 213 t~~li~~~~l~~mk~gavlVN~~r 236 (317)
-...++.++++..++.++-
T Consensus 246 -----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 246 -----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp -----HHHHHHHEEEEEEEEECSC
T ss_pred -----HHHHHHHhccCCEEEEeCC
Confidence 2456677888888888864
No 413
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.61 E-value=0.05 Score=48.56 Aligned_cols=34 Identities=24% Similarity=0.119 Sum_probs=30.3
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
+++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 578999996 9999999999998899998888765
No 414
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.61 E-value=0.025 Score=52.39 Aligned_cols=29 Identities=28% Similarity=0.268 Sum_probs=23.5
Q ss_pred CeEEEEecChhHHHHHHHHhhC---CCEEEEe
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF---DCIIGYN 177 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~ 177 (317)
.+|||+|+|.||+.+.+.|... .++|.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivai 32 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAI 32 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 4799999999999999998654 4776644
No 415
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.60 E-value=0.024 Score=53.99 Aligned_cols=65 Identities=18% Similarity=0.230 Sum_probs=47.8
Q ss_pred CCeEEEEecCh---hHHHHHHHHhhCC-CEEE--EeCCCCCCC------CCc---cccCCHHHhccc-------CCEEEE
Q 042102 148 GKSVGILGMGR---IGTAIAKRAEAFD-CIIG--YNSRTEKPN------LNY---KYYPNLIDLASN-------CQILVV 205 (317)
Q Consensus 148 g~~vgIiG~G~---iG~~~a~~l~~~G-~~V~--~~~~~~~~~------~~~---~~~~~l~el~~~-------aDvV~~ 205 (317)
..+|||||+|. ||+..+..++..+ +++. ++|+++... .+. ..+.+++++++. .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999888877665 6764 568765432 122 356789999876 999999
Q ss_pred eccCChh
Q 042102 206 ACSLTEE 212 (317)
Q Consensus 206 ~lp~~~~ 212 (317)
++|....
T Consensus 117 ~tp~~~H 123 (417)
T 3v5n_A 117 VTPNHVH 123 (417)
T ss_dssp CSCTTSH
T ss_pred CCCcHHH
Confidence 9997643
No 416
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.56 E-value=0.015 Score=56.25 Aligned_cols=64 Identities=19% Similarity=0.230 Sum_probs=47.0
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCcc-------ccCCHHHh-cccCCEEEEeccCCh
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYK-------YYPNLIDL-ASNCQILVVACSLTE 211 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~-------~~~~l~el-~~~aDvV~~~lp~~~ 211 (317)
.++|-|+|+|.+|+.+|+.|...|.+|.+.|..++.. .+.. ....|+++ +++||.++.+.+.++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 5789999999999999999999999999998765431 1111 11225554 789998887766543
No 417
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.54 E-value=0.044 Score=49.21 Aligned_cols=61 Identities=13% Similarity=0.190 Sum_probs=45.8
Q ss_pred CCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCC---------CccccCCHHHhcccCCEEEEeccC
Q 042102 148 GKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNL---------NYKYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 148 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~l~el~~~aDvV~~~lp~ 209 (317)
+++|.|.| .|.||+.+++.|...|.+|.+.+|+..... +.. ..++.++++.+|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47899999 699999999999999999999888733211 111 23466788899998877654
No 418
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.53 E-value=0.033 Score=48.18 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=57.9
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCc--------cccCCHHHhc---------ccCCEEEEecc
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNY--------KYYPNLIDLA---------SNCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~--------~~~~~l~el~---------~~aDvV~~~lp 208 (317)
.||++.|.|. |.||+.+++.|...|++|+..+|+....... ....++++++ ...|+|+.+.-
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 81 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG 81 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 5788999985 7999999999999999999888876442210 0011223333 36798887754
Q ss_pred CC-------hhh----hccc----------cHHHHhccCCCcEEEEeCCCc
Q 042102 209 LT-------EET----QHIV----------NRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 209 ~~-------~~t----~~li----------~~~~l~~mk~gavlVN~~rg~ 238 (317)
.. +.+ ...+ .+..++.|+++..+||++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 132 (236)
T 1ooe_A 82 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 132 (236)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 21 111 1111 234556676677899998743
No 419
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.53 E-value=0.13 Score=50.00 Aligned_cols=94 Identities=12% Similarity=0.158 Sum_probs=66.7
Q ss_pred cccCCeEEEEecC----------hhHHHHHHHHhhCCCEEEEeCCCCCCC--C--------------CccccCCHHHhcc
Q 042102 145 KFTGKSVGILGMG----------RIGTAIAKRAEAFDCIIGYNSRTEKPN--L--------------NYKYYPNLIDLAS 198 (317)
Q Consensus 145 ~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~--~--------------~~~~~~~l~el~~ 198 (317)
.+.|++|+|+|+- .-...+++.|...|++|.+||+..... . ......++.+.++
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAAR 404 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHh
Confidence 5689999999984 356789999999999999999975321 0 1223457889999
Q ss_pred cCCEEEEeccCChhhhccccHHHH-hccCCCcEEEEeCCCcccCHH
Q 042102 199 NCQILVVACSLTEETQHIVNRQVI-NALGPKGVLINIGRGLLVDEH 243 (317)
Q Consensus 199 ~aDvV~~~lp~~~~t~~li~~~~l-~~mk~gavlVN~~rg~~vd~~ 243 (317)
.+|+|+++....+ .+. ++.+.+ +.|+ +.+++|+ |+ +.|.+
T Consensus 405 ~ad~~vi~t~~~~-f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 405 DADALVIVTEWKI-FKS-PDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp TCSEEEECSCCGG-GGS-CCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred CCCEEEEecCChH-hhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 9999999988653 332 354444 4555 5888887 44 34543
No 420
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.51 E-value=0.17 Score=48.19 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=67.5
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEE-EeCCCC-----CC-----------CCCc------------cccCCH
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRTE-----KP-----------NLNY------------KYYPNL 193 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~-----~~-----------~~~~------------~~~~~l 193 (317)
+.++.|++|.|.|+|++|+.+++.|..+|++|+ +.|.+. +. ..+. ....+.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 446899999999999999999999999999987 444421 00 0000 111022
Q ss_pred HHhc-ccCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 194 IDLA-SNCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 194 ~el~-~~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
++++ ..||+++-|.- .+.|+.+..+.++ =.+++--+-+.+- .++ .+.|.+..+.
T Consensus 285 ~~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPTT-PEA-ERILYERGVV 339 (421)
T ss_dssp TGGGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCBC-HHH-HHHHHTTTCE
T ss_pred hhhhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcCC-HHH-HHHHHHCCCE
Confidence 4443 46898877742 4556666666664 3556666777754 333 3667777776
No 421
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.49 E-value=0.11 Score=46.74 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=33.1
Q ss_pred ccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCC
Q 042102 144 TKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRT 180 (317)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~ 180 (317)
..+.||++.|.|. |.||+++|+.|...|++|++.++.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999996 689999999999999999988775
No 422
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.49 E-value=0.1 Score=48.69 Aligned_cols=82 Identities=22% Similarity=0.269 Sum_probs=54.1
Q ss_pred CCeEEEEe-cChhHHHHHHHHhhCCC-EEEEe-CCCCC-CC---------CCcc-ccCCHHHhcccCCEEEEeccCChhh
Q 042102 148 GKSVGILG-MGRIGTAIAKRAEAFDC-IIGYN-SRTEK-PN---------LNYK-YYPNLIDLASNCQILVVACSLTEET 213 (317)
Q Consensus 148 g~~vgIiG-~G~iG~~~a~~l~~~G~-~V~~~-~~~~~-~~---------~~~~-~~~~l~el~~~aDvV~~~lp~~~~t 213 (317)
-.+||||| .|.+|+.+.++|...-. ++... +++.. +. .... ...+.++++.++|++++|+|...+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~s- 91 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGAS- 91 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHH-
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHHH-
Confidence 35899997 69999999999987643 55543 32211 11 0111 112455666889999999996543
Q ss_pred hccccHHHHhccCCCcEEEEeCC
Q 042102 214 QHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~r 236 (317)
++....+ .|..+||.|.
T Consensus 92 -----~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 92 -----YDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp -----HHHHTTC-CSCEEEESSS
T ss_pred -----HHHHHHh-CCCEEEECCh
Confidence 4455555 7999999985
No 423
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.45 E-value=0.025 Score=52.14 Aligned_cols=36 Identities=28% Similarity=0.349 Sum_probs=32.5
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEK 182 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~ 182 (317)
.|++|.|+|. |.||..+++.++.+|++|++.+++.+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~ 195 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA 195 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5889999998 99999999999999999998887654
No 424
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.45 E-value=0.077 Score=49.30 Aligned_cols=83 Identities=18% Similarity=0.083 Sum_probs=48.9
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEEEe-CCCCCCC------C--C------------------ccccCCHHHhcccC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIGYN-SRTEKPN------L--N------------------YKYYPNLIDLASNC 200 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~-~~~~~~~------~--~------------------~~~~~~l~el~~~a 200 (317)
.+|||+|+|.||+.+++.+... +++|.+. +.+++.. . . .....+.++++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3899999999999999998765 5776544 3321110 0 0 00011344556789
Q ss_pred CEEEEeccCChhhhccccHHHHhccCCCcEEEEeC
Q 042102 201 QILVVACSLTEETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 201 DvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
|+|+.|+|.....+. .+ -..++.|..+|..+
T Consensus 83 DiV~eatg~~~s~~~---a~-~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQN---LE-NIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHHHH---HH-HTTTTTTCEEEECT
T ss_pred CEEEECCCccccHHH---HH-HHHHHCCCEEEECC
Confidence 999999885532111 10 13456676655443
No 425
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=94.45 E-value=0.082 Score=50.84 Aligned_cols=37 Identities=11% Similarity=0.190 Sum_probs=32.3
Q ss_pred cccccCCeEEEEecChhHHHHHHHHhhCCCEEE-EeCC
Q 042102 143 TTKFTGKSVGILGMGRIGTAIAKRAEAFDCIIG-YNSR 179 (317)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~ 179 (317)
+.++.|+||.|-|+|++|+.+|+.|...|++|+ +.|.
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~ 271 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDS 271 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECS
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 456899999999999999999999999999975 5553
No 426
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.42 E-value=0.023 Score=53.07 Aligned_cols=85 Identities=18% Similarity=0.293 Sum_probs=59.0
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCcc-----ccCCHHHhcc--------cCCEEEEec
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYK-----YYPNLIDLAS--------NCQILVVAC 207 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~-----~~~~l~el~~--------~aDvV~~~l 207 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++++.. .++. ...++.+.+. ..|+|+-+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 47899999999999999999999999 898888765431 1211 1123434333 378888776
Q ss_pred cCChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 208 SLTEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 208 p~~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
... ++ -...++.++++..+|.++-
T Consensus 262 G~~-~~----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVA-ET----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCH-HH----HHHHHHHEEEEEEEEECSC
T ss_pred CCH-HH----HHHHHHHhccCCEEEEEec
Confidence 522 21 2456778889999888874
No 427
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.42 E-value=0.037 Score=46.60 Aligned_cols=63 Identities=16% Similarity=0.045 Sum_probs=44.4
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCC--EEEEeCCCCCCC-CCcc-ccCC------HHHhcccCCEEEEeccCCh
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDC--IIGYNSRTEKPN-LNYK-YYPN------LIDLASNCQILVVACSLTE 211 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~-~~~~-~~~~------l~el~~~aDvV~~~lp~~~ 211 (317)
.+++|.|.| .|.||+.+++.|...|. +|.+.+|++... .... ...+ +.+++ +|+|+.+.....
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 467999999 79999999999999998 999888876431 1111 1112 33334 899988876543
No 428
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.41 E-value=0.019 Score=53.37 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=44.8
Q ss_pred CeEEEEecChhHHHHHHHHhhC--------CCEE-EEeCCCCCCC------CC-ccccCCHHHhccc--CCEEEEeccCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF--------DCII-GYNSRTEKPN------LN-YKYYPNLIDLASN--CQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~--------G~~V-~~~~~~~~~~------~~-~~~~~~l~el~~~--aDvV~~~lp~~ 210 (317)
.+|||||+|.||+.-++.++.. +++| .++|++++.. .+ ...+.+++++++. .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 5899999999999877766542 2355 4678765432 12 2346789999864 79999999965
Q ss_pred h
Q 042102 211 E 211 (317)
Q Consensus 211 ~ 211 (317)
.
T Consensus 87 ~ 87 (390)
T 4h3v_A 87 S 87 (390)
T ss_dssp G
T ss_pred H
Confidence 4
No 429
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.40 E-value=0.061 Score=53.62 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=49.5
Q ss_pred cEEEeCCCC-CcHHHHHHHHHHHHHHhhchhHHHHHHHcCCCccCcccccccccCCeEEEEecChhHHHHHHHHhhCCC-
Q 042102 95 IRVANTPDV-LTDDVADLAIGLILAVLRRICESDRYVRSGEWKKGEFKMTTKFTGKSVGILGMGRIGTAIAKRAEAFDC- 172 (317)
Q Consensus 95 I~v~n~~~~-~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~- 172 (317)
-++.+-... .....||.+.-+-|-+.|- ..|.... ...+++++|.|||+|.+|..+|+.|...|.
T Consensus 285 ~~~~~l~~~~dp~~la~~~~~Lnlklm~w----------Rllp~~g---~ekL~~arVLIVGaGGLGs~vA~~La~aGVG 351 (615)
T 4gsl_A 285 PRVVDLSSLLDPLKIADQSVDLNLKLMKW----------RILPDLN---LDIIKNTKVLLLGAGTLGCYVSRALIAWGVR 351 (615)
T ss_dssp CEEEECHHHHCHHHHHHHHHHHHHHHHHH----------HTCTTCC---HHHHHTCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred eeEEeccccCCHHHHHhhhhhhhhHHHHH----------hhcchhh---HHHHhCCeEEEECCCHHHHHHHHHHHHcCCC
Confidence 455554332 5667787777665554332 1222110 136899999999999999999999999998
Q ss_pred EEEEeCCC
Q 042102 173 IIGYNSRT 180 (317)
Q Consensus 173 ~V~~~~~~ 180 (317)
++..+|..
T Consensus 352 ~ItLvD~D 359 (615)
T 4gsl_A 352 KITFVDNG 359 (615)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 78777764
No 430
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.39 E-value=0.065 Score=49.64 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=49.1
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCC-CEEEEeCCCCCCC-------CCccc-------cCCHHHhcccCCEEEEecc
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFD-CIIGYNSRTEKPN-------LNYKY-------YPNLIDLASNCQILVVACS 208 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G-~~V~~~~~~~~~~-------~~~~~-------~~~l~el~~~aDvV~~~lp 208 (317)
.+.+++|.|.|. |.||+.+++.|...| .+|.+.+|..... ..... ..++.++++.+|+|+.+..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 578999999996 999999999999999 9999998865431 11111 1235567889999887765
Q ss_pred CC
Q 042102 209 LT 210 (317)
Q Consensus 209 ~~ 210 (317)
..
T Consensus 109 ~~ 110 (377)
T 2q1s_A 109 YH 110 (377)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 431
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.39 E-value=0.054 Score=50.25 Aligned_cols=29 Identities=34% Similarity=0.430 Sum_probs=23.8
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEEEe
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIGYN 177 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~ 177 (317)
.+|||+|+|.||+.+++.+... +++|.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI 33 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAV 33 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEE
Confidence 3899999999999999998765 5676543
No 432
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.38 E-value=0.06 Score=53.59 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=32.4
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCC
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSR 179 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~ 179 (317)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~ 359 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 359 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 56899999999999999999999999998 6877764
No 433
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.38 E-value=0.019 Score=50.69 Aligned_cols=60 Identities=15% Similarity=0.117 Sum_probs=42.7
Q ss_pred eEEEEec-ChhHHHHHHHHhhC--CCEEEEeCCCCCCCC-----Ccc-------ccCCHHHhcccCCEEEEeccC
Q 042102 150 SVGILGM-GRIGTAIAKRAEAF--DCIIGYNSRTEKPNL-----NYK-------YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 150 ~vgIiG~-G~iG~~~a~~l~~~--G~~V~~~~~~~~~~~-----~~~-------~~~~l~el~~~aDvV~~~lp~ 209 (317)
+|.|.|. |.||+.+++.|... |++|.+.+|++.... +.. ...++.++++.+|+|+.+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4788887 99999999999988 999998887654321 111 112466788899998876553
No 434
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=94.37 E-value=0.075 Score=47.27 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=33.4
Q ss_pred ccccCCeEEEEec-Ch--hHHHHHHHHhhCCCEEEEeCCCC
Q 042102 144 TKFTGKSVGILGM-GR--IGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 144 ~~l~g~~vgIiG~-G~--iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
..+.||++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 4689999999996 44 99999999999999999888765
No 435
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.33 E-value=0.14 Score=45.23 Aligned_cols=37 Identities=16% Similarity=-0.012 Sum_probs=33.0
Q ss_pred ccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCC
Q 042102 144 TKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRT 180 (317)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~ 180 (317)
..+.||++.|.|. |.||+.+|+.|...|++|++.+++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 4689999999997 579999999999999999988775
No 436
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.33 E-value=0.038 Score=51.20 Aligned_cols=29 Identities=34% Similarity=0.396 Sum_probs=23.5
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEEEEe
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCIIGYN 177 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~ 177 (317)
.+|||+|+|.||+.+.+.|..- .++|.+.
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivai 31 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAV 31 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEE
Confidence 3799999999999999998754 4676544
No 437
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.33 E-value=0.032 Score=49.24 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=46.7
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCCC--c-------cccCCHHHhcccCCEEEEecc
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNLN--Y-------KYYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~--~-------~~~~~l~el~~~aDvV~~~lp 208 (317)
.+|+|.|.| .|.||+.+++.|...|++|...+|+...... . ....++.+++++.|+|+.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 467899999 6999999999999999999998887644321 1 112245678889998887754
No 438
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.31 E-value=0.071 Score=49.34 Aligned_cols=86 Identities=19% Similarity=0.121 Sum_probs=58.4
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCE-EEEeCCCCCCC-----C--Cc-ccc------CCHHH----hc--ccCCEEEE
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCI-IGYNSRTEKPN-----L--NY-KYY------PNLID----LA--SNCQILVV 205 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~-V~~~~~~~~~~-----~--~~-~~~------~~l~e----l~--~~aDvV~~ 205 (317)
.|.+|.|+|.|.+|...++.++.+|++ |++.++++++. . .. ... .++.+ +. ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 478999999999999999999999997 88877654321 0 00 000 11111 11 25899988
Q ss_pred eccCChhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 206 ACSLTEETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 206 ~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
++.... + -...++.++++..+|.++-.
T Consensus 259 ~~g~~~-~----~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 259 CTGVES-S----IAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CSCCHH-H----HHHHHHHSCTTCEEEECCCC
T ss_pred CCCChH-H----HHHHHHHhcCCCEEEEEccC
Confidence 876322 1 14567889999999998753
No 439
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=94.31 E-value=0.053 Score=47.07 Aligned_cols=94 Identities=11% Similarity=0.106 Sum_probs=58.3
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCc--------cccCCHHHhc---------ccCCEEEEe
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNY--------KYYPNLIDLA---------SNCQILVVA 206 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~--------~~~~~l~el~---------~~aDvV~~~ 206 (317)
...||++.|.|. |.||+.+++.|...|++|+..+|+....... ....++++++ ...|+++.+
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~ 83 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV 83 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEc
Confidence 356889999985 6899999999999999999888875432210 0111233333 267988877
Q ss_pred ccCC-------hhh----hcc----------ccHHHHhccCCCcEEEEeCCCc
Q 042102 207 CSLT-------EET----QHI----------VNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 207 lp~~-------~~t----~~l----------i~~~~l~~mk~gavlVN~~rg~ 238 (317)
.-.. +.+ ... +.+..++.|+++..+||++...
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~ 136 (241)
T 1dhr_A 84 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 136 (241)
T ss_dssp CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence 5421 110 111 1134456677678899998743
No 440
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.27 E-value=0.053 Score=48.73 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=43.6
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-Cc-------cccCCHHHhccc--CCEEEEeccCC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-NY-------KYYPNLIDLASN--CQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~-------~~~~~l~el~~~--aDvV~~~lp~~ 210 (317)
..++|.|.|. |.||+.+++.|...|++|.+.+|...... .. ....++.++++. .|+|+.+....
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 85 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS 85 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 3468888875 89999999999999999998887654310 11 111234566665 89888776543
No 441
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.22 E-value=0.044 Score=48.94 Aligned_cols=61 Identities=11% Similarity=0.044 Sum_probs=46.1
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCC-CEEEEeCCCCCCC-------CCcc-------ccCCHHHhcccCCEEEEecc
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFD-CIIGYNSRTEKPN-------LNYK-------YYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G-~~V~~~~~~~~~~-------~~~~-------~~~~l~el~~~aDvV~~~lp 208 (317)
+++|.|.|. |.||+.+++.|...| ++|.+.+|++... .+.. ...++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999998 999999999999888 9999888875431 1111 12246678899999988764
No 442
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.19 E-value=0.05 Score=49.87 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=42.8
Q ss_pred CeEEEEecChhHHHHHHHHhh--CCCEE-EEeCCCCCC-C------CCcc-ccCCHHHhc-----ccCCEEEEeccC
Q 042102 149 KSVGILGMGRIGTAIAKRAEA--FDCII-GYNSRTEKP-N------LNYK-YYPNLIDLA-----SNCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~--~G~~V-~~~~~~~~~-~------~~~~-~~~~l~el~-----~~aDvV~~~lp~ 209 (317)
.+|||||+|.||+.+++.+.. -++++ .++|+++.. . .+.. ...+.++++ .+.|+|+.++|.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 589999999999999999843 45665 467776544 1 1221 234567775 458999999993
No 443
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.16 E-value=0.23 Score=48.25 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=67.5
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCC-----CC-------------------CccccCCHHH-hccc
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKP-----NL-------------------NYKYYPNLID-LASN 199 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~-----~~-------------------~~~~~~~l~e-l~~~ 199 (317)
++.|+||.|-|+|++|+..|+.|..+|++|+..+.+... .. +.....+ + +-..
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~--~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG--SILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS--CGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc--cccccc
Confidence 589999999999999999999999999998764321100 00 0001111 2 2346
Q ss_pred CCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCcccCHHHHHHHHHhCCce
Q 042102 200 CQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGLLVDEHELVSALLQGRLG 255 (317)
Q Consensus 200 aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~~vd~~aL~~al~~g~i~ 255 (317)
||+++-|.- .+.|+.+..+.++ -.+++-.+.+.+ ..++ .+.|.+..|.
T Consensus 319 ~DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 319 CDILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNIM 366 (501)
T ss_dssp CSEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred ceEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCCE
Confidence 998877633 5678888777776 456677777864 4444 4667777775
No 444
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.16 E-value=0.027 Score=51.90 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=55.5
Q ss_pred cCCeEEEEecChhHHHHHHHHhhC--CCEEEEeCCCCCCC-----CCccccCC-------HHHhcc--cCCEEEEeccCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAF--DCIIGYNSRTEKPN-----LNYKYYPN-------LIDLAS--NCQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~-----~~~~~~~~-------l~el~~--~aDvV~~~lp~~ 210 (317)
.|.+|.|+|.|.+|...++.++.+ |++|++.+++.++. .+.....+ .+++.. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 688999999999999999999999 99999998765332 11111111 111211 467777776532
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
+. -+..++.++++..+|.++.
T Consensus 250 ~~-----~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 250 ET-----TYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHhhcCCEEEEeCC
Confidence 11 1345667777777777763
No 445
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=94.14 E-value=0.19 Score=46.23 Aligned_cols=89 Identities=6% Similarity=-0.069 Sum_probs=64.5
Q ss_pred cccCCeEEE-----EecChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----CccccCCHHHhcccCCEEEEeccCC--h-
Q 042102 145 KFTGKSVGI-----LGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYKYYPNLIDLASNCQILVVACSLT--E- 211 (317)
Q Consensus 145 ~l~g~~vgI-----iG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDvV~~~lp~~--~- 211 (317)
.+. .+|++ +|=+++.++.+..+..||++|.+..+..-... ......+++++++++|+|..-.=.. .
T Consensus 166 ~l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~ 244 (324)
T 1js1_X 166 RPK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGD 244 (324)
T ss_dssp SCE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTT
T ss_pred Cee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCc
Confidence 366 89999 99999999999999999999988876433221 2344678999999999998732210 0
Q ss_pred --------hhhccccHHHHhccCCCcEEEEeC
Q 042102 212 --------ETQHIVNRQVINALGPKGVLINIG 235 (317)
Q Consensus 212 --------~t~~li~~~~l~~mk~gavlVN~~ 235 (317)
.....++++.++.+| +++|.-+.
T Consensus 245 ~~~~~~~r~~~y~vt~e~l~~a~-~ai~MHcL 275 (324)
T 1js1_X 245 NYGQILSTDRNWTVGDRQMAVTN-NAYFMHCL 275 (324)
T ss_dssp CTTCCCCCCTTSSBCHHHHTTSS-SCEEECCS
T ss_pred cccchHHHhcCcccCHHHHHhcC-CcEEECCC
Confidence 012346777777777 77777764
No 446
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=94.14 E-value=0.059 Score=46.53 Aligned_cols=61 Identities=13% Similarity=0.031 Sum_probs=43.3
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCcc-----ccCCHHHhcc----cCCEEEEeccC
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYK-----YYPNLIDLAS----NCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~l~el~~----~aDvV~~~lp~ 209 (317)
|++.|.|. |.||+.+++.|...|++|.+.+|+........ ...+++++++ ..|+|+.+...
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence 47889987 99999999999999999999888654321110 1123445554 78998877543
No 447
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.12 E-value=0.09 Score=47.30 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=42.5
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC---------CCcc-------ccCCHHHhcccCCEEEEecc
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN---------LNYK-------YYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~---------~~~~-------~~~~l~el~~~aDvV~~~lp 208 (317)
++|.|.|. |.+|+.+++.|...|++|.+.+|+.... .+.. ...++.++++.+|+|+.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 58999995 9999999999999999999888765311 1111 11235566777787776654
No 448
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=94.12 E-value=0.029 Score=49.40 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=33.2
Q ss_pred cccCCeEEEEec---ChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 145 KFTGKSVGILGM---GRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 145 ~l~g~~vgIiG~---G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
.+.||++.|.|. |.||+.+|+.|...|++|+..+|+.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 578999999998 6999999999999999999888765
No 449
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=94.05 E-value=0.092 Score=46.74 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=33.7
Q ss_pred cccCCeEEEEecC-hhHHHHHHHHhhCCCEEEEeCCCCC
Q 042102 145 KFTGKSVGILGMG-RIGTAIAKRAEAFDCIIGYNSRTEK 182 (317)
Q Consensus 145 ~l~g~~vgIiG~G-~iG~~~a~~l~~~G~~V~~~~~~~~ 182 (317)
+|+||++.|-|.+ .||+++|+.|...|++|+..+|+..
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~ 46 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP 46 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch
Confidence 5899999999975 5999999999999999998888654
No 450
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.02 E-value=0.021 Score=52.52 Aligned_cols=81 Identities=10% Similarity=0.054 Sum_probs=55.0
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC----Cccc----cC---CHHHh-cccCCEEEEeccCChhhhc
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL----NYKY----YP---NLIDL-ASNCQILVVACSLTEETQH 215 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~----~~---~l~el-~~~aDvV~~~lp~~~~t~~ 215 (317)
.+++.|+|+|.+|+.+++.|...|. |.+.+++++... +... .. .++++ +++||.++++.+.++. +
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~--n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE--T 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--H
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--H
Confidence 5689999999999999999999999 999988764321 1110 11 24445 7889999999876543 3
Q ss_pred cccHHHHhccCCCcEE
Q 042102 216 IVNRQVINALGPKGVL 231 (317)
Q Consensus 216 li~~~~l~~mk~gavl 231 (317)
+.-....+.+.+...+
T Consensus 192 ~~~~~~ar~~~~~~~i 207 (336)
T 1lnq_A 192 IHCILGIRKIDESVRI 207 (336)
T ss_dssp HHHHHHHHTTCTTSEE
T ss_pred HHHHHHHHHHCCCCeE
Confidence 3334455566665333
No 451
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.01 E-value=0.047 Score=49.66 Aligned_cols=87 Identities=20% Similarity=0.201 Sum_probs=53.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCC--EEEEeCCCCCCCC-------------C--cc-ccCCHHHhcccCCEEEEecc--
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDC--IIGYNSRTEKPNL-------------N--YK-YYPNLIDLASNCQILVVACS-- 208 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-------------~--~~-~~~~l~el~~~aDvV~~~lp-- 208 (317)
+||+|||.|.||+.+|-.|+..+. ++..+|....... . .. ...+-.+.++.||+|++..-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 589999999999999998876664 7888887643210 0 00 11222467899999998753
Q ss_pred CChh-hhc-cc--cH-------HHHhccCCCcEEEEeC
Q 042102 209 LTEE-TQH-IV--NR-------QVINALGPKGVLINIG 235 (317)
Q Consensus 209 ~~~~-t~~-li--~~-------~~l~~mk~gavlVN~~ 235 (317)
-.|. ||. ++ |. +.+..-.|+++++.++
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 2221 221 22 21 1233346788888774
No 452
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=94.00 E-value=0.13 Score=45.47 Aligned_cols=64 Identities=20% Similarity=0.130 Sum_probs=45.0
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCcc-------ccCCHHHhcc-------cCCEEEEecc
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYK-------YYPNLIDLAS-------NCQILVVACS 208 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~-------~~~~l~el~~-------~aDvV~~~lp 208 (317)
.+.||++.|.|. |.||+.+++.|...|++|++.+|+........ ...+++++++ ..|+|+.+..
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag 83 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG 83 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 478999999985 78999999999999999998887654321111 1112333333 6899888754
No 453
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=93.99 E-value=0.23 Score=43.92 Aligned_cols=102 Identities=10% Similarity=0.064 Sum_probs=65.9
Q ss_pred ccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHH-HhcccCCEEEEeccCChhhhccccHHHHhc
Q 042102 146 FTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLI-DLASNCQILVVACSLTEETQHIVNRQVINA 224 (317)
Q Consensus 146 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~-el~~~aDvV~~~lp~~~~t~~li~~~~l~~ 224 (317)
..+++|++||+-. .+.++++.. +++.++|+++............+ +++++||+|++. .+.=..+-| .+.++.
T Consensus 114 ~~~~kV~vIG~~p---~l~~~l~~~-~~v~V~d~~p~~~~~~~~~~~~e~~~l~~~D~v~iT--GsTlvN~Ti-~~lL~~ 186 (249)
T 3npg_A 114 DEIKRIAIIGNMP---PVVRTLKEK-YEVYVFERNMKLWDRDTYSDTLEYHILPEVDGIIAS--ASCIVNGTL-DMILDR 186 (249)
T ss_dssp SCCSEEEEESCCH---HHHHHHTTT-SEEEEECCSGGGCCSSEECGGGHHHHGGGCSEEEEE--TTHHHHTCH-HHHHHH
T ss_pred cCCCEEEEECCCH---HHHHHHhcc-CCEEEEECCCcccCCCCCChhHHHhhhccCCEEEEE--eeeeccCCH-HHHHHh
Confidence 3458999999976 678888877 89999999876421112223344 589999999887 333222222 356777
Q ss_pred cCCCcEEEEeCCCc-------------------ccCHHHHHHHHHhCCc
Q 042102 225 LGPKGVLINIGRGL-------------------LVDEHELVSALLQGRL 254 (317)
Q Consensus 225 mk~gavlVN~~rg~-------------------~vd~~aL~~al~~g~i 254 (317)
.|++..+|=+|-.. +.|.+.+++.++.|.-
T Consensus 187 ~~~~~~vvl~GPS~~~~P~~~~~~Gv~~l~g~~v~d~~~~l~~i~~G~~ 235 (249)
T 3npg_A 187 AKKAKLIVITGPTGQLLPEFLKGTKVTHLASMKVTNIEKALVKLKLGSF 235 (249)
T ss_dssp CSSCSEEEEESGGGCSCGGGGTTSSCCEEEEEEESCHHHHHHHHHHTCH
T ss_pred CcccCeEEEEecCchhhHHHHhhCCccEEEEEEecCHHHHHHHHHcccc
Confidence 77776555544211 2466777777777653
No 454
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.98 E-value=0.048 Score=46.92 Aligned_cols=64 Identities=16% Similarity=0.072 Sum_probs=47.0
Q ss_pred ccCCeEEEEe-cChhHHHHHHHHhhC--CCEEEEeCCCCCCC----CCc-------cccCCHHHhcccCCEEEEeccC
Q 042102 146 FTGKSVGILG-MGRIGTAIAKRAEAF--DCIIGYNSRTEKPN----LNY-------KYYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~----~~~-------~~~~~l~el~~~aDvV~~~lp~ 209 (317)
..+++|.|.| .|.||+.+++.|... |++|...+|++... ... ....++.++++++|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999999 599999999999988 89999888764321 011 1123466788899999887653
No 455
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.97 E-value=0.075 Score=47.84 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=43.6
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCC-CC-------------CCCcc-------ccCCHHHhcccCCEEEE
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTE-KP-------------NLNYK-------YYPNLIDLASNCQILVV 205 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~-~~-------------~~~~~-------~~~~l~el~~~aDvV~~ 205 (317)
.++|.|.|. |.+|+.+++.|...|++|.+.+|+. .. ..+.. ...++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999995 9999999999999999999888865 11 01111 11235667778888777
Q ss_pred ecc
Q 042102 206 ACS 208 (317)
Q Consensus 206 ~lp 208 (317)
+..
T Consensus 84 ~a~ 86 (321)
T 3c1o_A 84 ALP 86 (321)
T ss_dssp CCC
T ss_pred CCC
Confidence 655
No 456
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.96 E-value=0.13 Score=49.83 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=68.2
Q ss_pred cccCCeEEEEec----------ChhHHHHHHHHhhCCCEEEEeCCCCCCC---------CC-------ccccCCHHHhcc
Q 042102 145 KFTGKSVGILGM----------GRIGTAIAKRAEAFDCIIGYNSRTEKPN---------LN-------YKYYPNLIDLAS 198 (317)
Q Consensus 145 ~l~g~~vgIiG~----------G~iG~~~a~~l~~~G~~V~~~~~~~~~~---------~~-------~~~~~~l~el~~ 198 (317)
.+.|++|+|+|+ ..-...+++.|...|++|.+||+..... .+ .....++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 468999999997 4567889999999999999999875321 00 122356788999
Q ss_pred cCCEEEEeccCChhhhccccHHHH-hccCCCcEEEEeCCCcccCHHHH
Q 042102 199 NCQILVVACSLTEETQHIVNRQVI-NALGPKGVLINIGRGLLVDEHEL 245 (317)
Q Consensus 199 ~aDvV~~~lp~~~~t~~li~~~~l-~~mk~gavlVN~~rg~~vd~~aL 245 (317)
.+|.|+++....+ .+. ++.+.+ +.|+...+++|+ |+ +.|.+.+
T Consensus 412 ~ad~~vi~t~~~~-f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEWDE-FVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp TCSEEEECSCCGG-GTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred CCCEEEEcCCcHH-hhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 9999999988653 332 354444 467776688886 54 4565443
No 457
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.94 E-value=0.042 Score=50.73 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=32.3
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEK 182 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~ 182 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~ 202 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKH 202 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHH
Confidence 47899999999999999999999999 7999887654
No 458
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=93.90 E-value=0.041 Score=50.95 Aligned_cols=83 Identities=14% Similarity=0.023 Sum_probs=48.3
Q ss_pred CeEEEEe-cChhHHHHHHHHhhC---CCEEEEe-CCCCC-CC---CCcc-ccCCH-HHhcccCCEEEEeccCChhhhccc
Q 042102 149 KSVGILG-MGRIGTAIAKRAEAF---DCIIGYN-SRTEK-PN---LNYK-YYPNL-IDLASNCQILVVACSLTEETQHIV 217 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~~---G~~V~~~-~~~~~-~~---~~~~-~~~~l-~el~~~aDvV~~~lp~~~~t~~li 217 (317)
.+|||+| .|.+|+.+.+.|... .+++... +++.. .. .+.. ...++ .+.++.+|+|+.|+|.....+ ..
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s~~-~a 82 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAK-WA 82 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHHHH-HH
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHHHH-HH
Confidence 5899999 999999999998765 3465544 33221 11 0100 11111 124578999999998543211 11
Q ss_pred cHHHHhccCCCcEEEEeCC
Q 042102 218 NRQVINALGPKGVLINIGR 236 (317)
Q Consensus 218 ~~~~l~~mk~gavlVN~~r 236 (317)
+. .++.|+.+|+.+.
T Consensus 83 -~~---~~~~G~~vId~s~ 97 (336)
T 2r00_A 83 -PI---AAEAGVVVIDNTS 97 (336)
T ss_dssp -HH---HHHTTCEEEECSS
T ss_pred -HH---HHHcCCEEEEcCC
Confidence 11 2345778887753
No 459
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=93.89 E-value=0.12 Score=47.98 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=47.4
Q ss_pred ccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----Ccc-------ccCCHHHhcccCCEEEEeccC
Q 042102 146 FTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYK-------YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~el~~~aDvV~~~lp~ 209 (317)
..+++|.|.|. |.||+.+++.|...|++|.+.+|...... ... ...++.++++.+|+|+.+...
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 35789999998 99999999999999999998887654321 111 112356778899988877553
No 460
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.87 E-value=0.059 Score=51.85 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=65.1
Q ss_pred CCeEEEEecChhHHHHHHHHhh----------CCCEEE-EeCCCCCCC----CCccccCCHHHhcc--cCCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEA----------FDCIIG-YNSRTEKPN----LNYKYYPNLIDLAS--NCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~----------~G~~V~-~~~~~~~~~----~~~~~~~~l~el~~--~aDvV~~~lp~~ 210 (317)
..+|||+|+|.||+.+++.+.. .+.+|. +++++.... .....+.++++++. +.|+|+.++|..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 3589999999999999887652 456654 566654321 12334678899986 579999999863
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCCCccc-CHHHHHHHHHhCCce
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGRGLLV-DEHELVSALLQGRLG 255 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~rg~~v-d~~aL~~al~~g~i~ 255 (317)
..-..+ ..+.++.|.-+|..--+... ..+.|.++.++.+..
T Consensus 90 ~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 221211 23455666666543332222 335777777776665
No 461
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=93.86 E-value=0.039 Score=48.47 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=45.7
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC--Ccc-------ccCCHHHhcccCCEEEEeccC
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL--NYK-------YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--~~~-------~~~~l~el~~~aDvV~~~lp~ 209 (317)
++|.|.|. |.||+.+++.|...|++|.+.+|+..... +.. ...++.++++.+|+|+.+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 58999998 99999999999999999999988764321 111 112356778899998887654
No 462
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.86 E-value=0.098 Score=48.80 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=44.5
Q ss_pred CeEEEEe-cChhHHH-HH----HHHhhCC-CEE----------EEeCCCCCCC------CCc-cccCCHHHhccc--CCE
Q 042102 149 KSVGILG-MGRIGTA-IA----KRAEAFD-CII----------GYNSRTEKPN------LNY-KYYPNLIDLASN--CQI 202 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~-~a----~~l~~~G-~~V----------~~~~~~~~~~------~~~-~~~~~l~el~~~--aDv 202 (317)
.+||||| +|.||+. .+ +.++..+ ..+ .++++++... .+. ..+.+++++++. .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 5899999 9999997 66 6665443 232 4788776432 222 246789999875 899
Q ss_pred EEEeccCCh
Q 042102 203 LVVACSLTE 211 (317)
Q Consensus 203 V~~~lp~~~ 211 (317)
|+++.|...
T Consensus 87 V~i~tp~~~ 95 (383)
T 3oqb_A 87 FFDAATTQA 95 (383)
T ss_dssp EEECSCSSS
T ss_pred EEECCCchH
Confidence 999999644
No 463
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=93.86 E-value=0.11 Score=48.27 Aligned_cols=28 Identities=25% Similarity=0.235 Sum_probs=22.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC---CCEEEE
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF---DCIIGY 176 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~ 176 (317)
.+|||+|+|.||+.+.+.|... .++|.+
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eiva 32 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVV 32 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEE
Confidence 3799999999999999998765 346643
No 464
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.85 E-value=0.067 Score=51.16 Aligned_cols=82 Identities=12% Similarity=0.105 Sum_probs=59.6
Q ss_pred cCCeEEEEecC----------hhHHHHHHHHhhCCCEEEEeCCCCCCCC-----C-----------ccccCCHHHhcccC
Q 042102 147 TGKSVGILGMG----------RIGTAIAKRAEAFDCIIGYNSRTEKPNL-----N-----------YKYYPNLIDLASNC 200 (317)
Q Consensus 147 ~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~-----------~~~~~~l~el~~~a 200 (317)
.|++|+|+|+. .-...+++.|...|++|.+||+...... . .....++.+.++.+
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 58999999997 5678999999999999999998522111 0 12345788899999
Q ss_pred CEEEEeccCChhhhccccHHHHhccCCCcEEEEe
Q 042102 201 QILVVACSLTEETQHIVNRQVINALGPKGVLINI 234 (317)
Q Consensus 201 DvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~ 234 (317)
|+|+++.... +.+. ++ .+.|+ +.+++|+
T Consensus 392 d~~vi~~~~~-~~~~-~~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGDE-LFVD-LV---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCCG-GGHH-HH---HSCCT-TCEEEES
T ss_pred cEEEEeCCcH-HHHh-hh---HHhcC-CCEEEEC
Confidence 9999998863 2222 12 34565 6788887
No 465
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.83 E-value=0.025 Score=51.78 Aligned_cols=84 Identities=14% Similarity=0.222 Sum_probs=56.5
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc----c-c-CCHHHhcc-----cCCEEEEeccC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK----Y-Y-PNLIDLAS-----NCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~----~-~-~~l~el~~-----~aDvV~~~lp~ 209 (317)
.|++|.|.|. |.||+.+++.++..|++|++.+++.+.. .+.. . . .++.+.+. ..|+++.+...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 5789999998 9999999999999999999888754321 1111 0 1 23333222 36777776542
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
.+ -...++.++++..+|.++-
T Consensus 225 --~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 --EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp --HH----HHHHHTTEEEEEEEEECCC
T ss_pred --HH----HHHHHHHHhcCCEEEEEec
Confidence 11 2456677888888888764
No 466
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.80 E-value=0.026 Score=51.86 Aligned_cols=84 Identities=14% Similarity=0.177 Sum_probs=55.8
Q ss_pred cCCeEEEEecC-hhHHHHHHHHhhCCCEEEEeCCCCCCCC-----Ccc-----ccCCHHHh----c--ccCCEEEEeccC
Q 042102 147 TGKSVGILGMG-RIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYK-----YYPNLIDL----A--SNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~G-~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~-----~~~~l~el----~--~~aDvV~~~lp~ 209 (317)
.|++|.|+|.| .||..+++.++.+|++|++.+++.+... +.. ...++.+. . ...|+|+-+...
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 57899999998 9999999999999999998887654321 111 01222222 1 146777776542
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
. .+ ...++.++++..+|.++-
T Consensus 224 ~-~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 P-DG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp H-HH-----HHHHHTEEEEEEEEECCC
T ss_pred h-hH-----HHHHHHhcCCCEEEEEee
Confidence 2 11 234567888888888864
No 467
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.76 E-value=0.072 Score=48.54 Aligned_cols=65 Identities=12% Similarity=0.140 Sum_probs=47.9
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC----------------CCcc-------ccCCHHHhcccC
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN----------------LNYK-------YYPNLIDLASNC 200 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~~~-------~~~~l~el~~~a 200 (317)
.+.+++|.|.|. |.||+.+++.|...|.+|.+.+|..... .... ...++.++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 357899999995 9999999999999999999988865321 1111 112356778899
Q ss_pred CEEEEeccC
Q 042102 201 QILVVACSL 209 (317)
Q Consensus 201 DvV~~~lp~ 209 (317)
|+|+.+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 988877653
No 468
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.74 E-value=0.056 Score=52.02 Aligned_cols=103 Identities=14% Similarity=0.121 Sum_probs=62.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC-CCEE-EEeCCCCCCC------C-C----------------------ccccCCHHHhc
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF-DCII-GYNSRTEKPN------L-N----------------------YKYYPNLIDLA 197 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~------~-~----------------------~~~~~~l~el~ 197 (317)
.+|||||+|.||+.+++.+... +++| .++|++.+.. . + ...+.++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4899999999999999888754 6775 4677765421 0 1 12357899998
Q ss_pred c--cCCEEEEeccCChhhhccccHHHHhccCCCcEEEEeCCCc-ccCHHHHHHHHHhCCce
Q 042102 198 S--NCQILVVACSLTEETQHIVNRQVINALGPKGVLINIGRGL-LVDEHELVSALLQGRLG 255 (317)
Q Consensus 198 ~--~aDvV~~~lp~~~~t~~li~~~~l~~mk~gavlVN~~rg~-~vd~~aL~~al~~g~i~ 255 (317)
+ +.|+|+.++|....-. +-.+..|+.|.-++...-+- ..+-+.|.++.++..+.
T Consensus 104 ~d~dIDaVviaTp~p~~H~----e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGIPEVGA----ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCCHHHHH----HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCChHHHH----HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 7 4899999988542111 22334455565555321111 12334666666555554
No 469
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=93.73 E-value=0.088 Score=49.20 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=39.5
Q ss_pred CeEEEEecChhHHHHHHHHhhC--C--CEEE-EeCCCCCCC--C--CccccCCHHHhcccC-------------------
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF--D--CIIG-YNSRTEKPN--L--NYKYYPNLIDLASNC------------------- 200 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~--G--~~V~-~~~~~~~~~--~--~~~~~~~l~el~~~a------------------- 200 (317)
.+|||||+|.||+.+++.+... | ++|. ++++..... . +...+.++++++...
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~ 84 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK 84 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhccC
Confidence 4799999999999999999875 3 5654 455432211 1 222224555555433
Q ss_pred -CEEEEeccCC
Q 042102 201 -QILVVACSLT 210 (317)
Q Consensus 201 -DvV~~~lp~~ 210 (317)
|+|+.|+|..
T Consensus 85 ~DvVV~~t~~~ 95 (358)
T 1ebf_A 85 PVILVDNTSSA 95 (358)
T ss_dssp CEEEEECSCCH
T ss_pred CcEEEEcCCCh
Confidence 7888888854
No 470
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.72 E-value=0.061 Score=51.43 Aligned_cols=108 Identities=14% Similarity=0.058 Sum_probs=66.6
Q ss_pred cccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccc--cCCHHHhcccCCEEEEeccC---Chhh
Q 042102 145 KFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKY--YPNLIDLASNCQILVVACSL---TEET 213 (317)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~--~~~l~el~~~aDvV~~~lp~---~~~t 213 (317)
++.+++|.|||+|..|.+.|+.|+..|++|.++|...... .+... -....+.+..+|.|++.-.. .|..
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSL 81 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSCTTSCEEESSCCHHHHHTCSEEEECTTSCTTCHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhhCCCEEEECCCcHHHhccCCEEEeCCCCCCCCHHH
Confidence 3678999999999999999999999999999988654322 12111 11124555689988887332 2322
Q ss_pred h-------ccccHH-HH-hccCCCcEEEEeCCCcccCHHHHHHHHHhC
Q 042102 214 Q-------HIVNRQ-VI-NALGPKGVLINIGRGLLVDEHELVSALLQG 252 (317)
Q Consensus 214 ~-------~li~~~-~l-~~mk~gavlVN~~rg~~vd~~aL~~al~~g 252 (317)
. .++.+- .+ ..++...+-|--+.|..--..-|...|++.
T Consensus 82 ~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 82 SAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp HHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 1 133321 12 234433444555667776666666666654
No 471
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=93.71 E-value=0.071 Score=47.77 Aligned_cols=62 Identities=13% Similarity=0.100 Sum_probs=39.8
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccccCCHHHhccc--CCEEEEeccC
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKYYPNLIDLASN--CQILVVACSL 209 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~--aDvV~~~lp~ 209 (317)
+++|.|.|. |.||+.+++.|...|++|.+.+|+.... .+.....++.++++. +|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 579999997 9999999999999999999988754321 111122345666664 8988877543
No 472
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=93.71 E-value=0.051 Score=50.46 Aligned_cols=29 Identities=28% Similarity=0.204 Sum_probs=23.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC---CCEEEEe
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF---DCIIGYN 177 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~ 177 (317)
.+|||+|+|.||+.+.+.|... +++|.+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaI 34 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 3899999999999999998765 3676543
No 473
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.69 E-value=0.073 Score=48.35 Aligned_cols=67 Identities=18% Similarity=0.026 Sum_probs=44.9
Q ss_pred cccccCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCC-------CCcc-------ccCCHHHhccc--CCEEEE
Q 042102 143 TTKFTGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPN-------LNYK-------YYPNLIDLASN--CQILVV 205 (317)
Q Consensus 143 ~~~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-------~~~~-------~~~~l~el~~~--aDvV~~ 205 (317)
...+.+++|.|.| .|.||+.+++.|...|++|.+.+|..... .... ...++.++++. +|+|+.
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence 3457889999998 69999999999999999999888764321 0111 01134566777 898887
Q ss_pred eccC
Q 042102 206 ACSL 209 (317)
Q Consensus 206 ~lp~ 209 (317)
+...
T Consensus 96 ~A~~ 99 (333)
T 2q1w_A 96 TAAS 99 (333)
T ss_dssp CCCC
T ss_pred Ccee
Confidence 7553
No 474
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.68 E-value=0.081 Score=48.88 Aligned_cols=58 Identities=14% Similarity=0.191 Sum_probs=41.9
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCC-Cc---c----ccCC---HHHhcccCCEEEEe
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNL-NY---K----YYPN---LIDLASNCQILVVA 206 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~---~----~~~~---l~el~~~aDvV~~~ 206 (317)
|||+|+|-|..|..+++.++.+|++|++.|.+++... .. . ...+ +.++.+.+|.|+..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~ 70 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPV 70 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence 6999999999999999999999999998887654321 10 0 0112 33456788987654
No 475
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.66 E-value=0.22 Score=43.95 Aligned_cols=50 Identities=24% Similarity=0.375 Sum_probs=37.4
Q ss_pred CeEEEEec-ChhHHHHHHHHhhC-CCEEE-EeCCCCCCCCCccccCCHHHhcc-cCCEEEEecc
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAF-DCIIG-YNSRTEKPNLNYKYYPNLIDLAS-NCQILVVACS 208 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~~~~~~~~l~el~~-~aDvV~~~lp 208 (317)
++|+|+|+ |.||+.+++.+... |+++. ++++. .++++++. .+|+|+-+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----------~dl~~~~~~~~DvvIDfT~ 54 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----------DPLSLLTDGNTEVVIDFTH 54 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------CCTHHHHHTTCCEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------CCHHHHhccCCcEEEEccC
Confidence 37999996 99999999998765 88875 55543 34666665 7998885543
No 476
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.57 E-value=0.21 Score=45.71 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=60.9
Q ss_pred CeEEEEe-cChhHHHHHHHHhh---CCCEEEEeCCCCCCC--------CCc--ccc----CCHHHhcccCCEEEEeccCC
Q 042102 149 KSVGILG-MGRIGTAIAKRAEA---FDCIIGYNSRTEKPN--------LNY--KYY----PNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 149 ~~vgIiG-~G~iG~~~a~~l~~---~G~~V~~~~~~~~~~--------~~~--~~~----~~l~el~~~aDvV~~~lp~~ 210 (317)
++|+|+| .|.+|+.++..|.. +.-++..+|...... ... ... .+..+.++.||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4899999 89999999999864 445788888765210 011 111 24678899999999986432
Q ss_pred hh---hh-ccc--cH-------HHHhccCCCcEEEEeCCCcccCHHHHH
Q 042102 211 EE---TQ-HIV--NR-------QVINALGPKGVLINIGRGLLVDEHELV 246 (317)
Q Consensus 211 ~~---t~-~li--~~-------~~l~~mk~gavlVN~~rg~~vd~~aL~ 246 (317)
.. ++ .++ |. +.+....|++++++++ .++|.-..+
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 11 11 112 11 1233346889999995 667665544
No 477
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=93.56 E-value=0.2 Score=44.96 Aligned_cols=88 Identities=13% Similarity=0.201 Sum_probs=57.7
Q ss_pred ccccCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcccCCEEEEeccCChhhhccccHHHHh
Q 042102 144 TKFTGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLASNCQILVVACSLTEETQHIVNRQVIN 223 (317)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDvV~~~lp~~~~t~~li~~~~l~ 223 (317)
....|++|++||+- ...++++.-++++.+++++++... .....-++++++||+|++.-. .=..+-+ ...|+
T Consensus 137 ~~~~g~kV~vIG~f----P~i~~~~~~~~~l~V~E~~p~~g~--~p~~~~~~~lp~~D~viiTgs--tlvN~Tl-~~lL~ 207 (270)
T 3l5o_A 137 NEVKGKKVGVVGHF----PHLESLLEPICDLSILEWSPEEGD--YPLPASEFILPECDYVYITCA--SVVDKTL-PRLLE 207 (270)
T ss_dssp TTTTTSEEEEESCC----TTHHHHHTTTSEEEEEESSCCTTC--EEGGGHHHHGGGCSEEEEETH--HHHHTCH-HHHHH
T ss_pred cccCCCEEEEECCc----hhHHHHHhcCCCEEEEECCCCCCC--CChhHHHHhhccCCEEEEEee--hhhcCCH-HHHHh
Confidence 35679999999985 455666777899999998775432 112235678999999988722 2111111 45677
Q ss_pred ccCCCcEEEEeCCCccc
Q 042102 224 ALGPKGVLINIGRGLLV 240 (317)
Q Consensus 224 ~mk~gavlVN~~rg~~v 240 (317)
..|+...+|=+|-....
T Consensus 208 ~~~~a~~vvl~GPStp~ 224 (270)
T 3l5o_A 208 LSRNARRITLVGPGTPL 224 (270)
T ss_dssp HTTTSSEEEEESTTCCC
T ss_pred hCCCCCEEEEECCCchh
Confidence 77887777766644433
No 478
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.55 E-value=0.11 Score=50.69 Aligned_cols=62 Identities=19% Similarity=0.109 Sum_probs=47.3
Q ss_pred CCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCCCCcc--ccCCHHHhcccCCEEEEeccC
Q 042102 148 GKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYK--YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 148 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~--~~~~l~el~~~aDvV~~~lp~ 209 (317)
+++|.|.| .|.||+.+++.|...|.+|.+.+|+........ ....+.+++..+|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCC
Confidence 68999999 699999999999999999999988765432111 123456778899998876553
No 479
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.53 E-value=0.027 Score=52.44 Aligned_cols=85 Identities=19% Similarity=0.173 Sum_probs=56.3
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCC-EEEEeCCCCCCC-----CCccc-----cCCHHHhcc-----cCCEEEEeccCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDC-IIGYNSRTEKPN-----LNYKY-----YPNLIDLAS-----NCQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~-----~~~~~-----~~~l~el~~-----~aDvV~~~lp~~ 210 (317)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .+... ..++.+.+. ..|+|+-+....
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 57899999999999999999999999 688887654321 11110 122222221 368777776532
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
+ + -...++.++++..+|.++-
T Consensus 270 ~-~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 E-I----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp H-H----HHHHHHTEEEEEEEEECCC
T ss_pred H-H----HHHHHHHHhcCCEEEEeCC
Confidence 1 1 1456677888888888764
No 480
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=93.48 E-value=0.056 Score=45.22 Aligned_cols=58 Identities=16% Similarity=0.261 Sum_probs=40.3
Q ss_pred eEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC-CCccccCCHHHhccc---CCEEEEecc
Q 042102 150 SVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN-LNYKYYPNLIDLASN---CQILVVACS 208 (317)
Q Consensus 150 ~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~-~~~~~~~~l~el~~~---aDvV~~~lp 208 (317)
++.|.|. |.||+.+++.|. .|++|...+|+.... .+.....++++++++ .|+|+.+..
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence 7888885 799999999999 999999888865311 111112234555554 798887654
No 481
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.39 E-value=0.023 Score=52.65 Aligned_cols=84 Identities=23% Similarity=0.223 Sum_probs=55.6
Q ss_pred cCCeEEEE-ecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc-----ccCCHHHhc-----ccCCEEEEeccCC
Q 042102 147 TGKSVGIL-GMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK-----YYPNLIDLA-----SNCQILVVACSLT 210 (317)
Q Consensus 147 ~g~~vgIi-G~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~-----~~~~l~el~-----~~aDvV~~~lp~~ 210 (317)
.|++|.|+ |.|.||..+++.++..|++|++.+++.... .+.. ...++.+.+ ...|+++-+....
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 57899999 689999999999999999999988765321 1111 011222222 2467777765521
Q ss_pred hhhhccccHHHHhccCCCcEEEEeCC
Q 042102 211 EETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 211 ~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
.-...++.++++..++.++.
T Consensus 247 ------~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 247 ------YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp ------GHHHHHHTEEEEEEEEECCC
T ss_pred ------HHHHHHHHhccCCEEEEEEe
Confidence 12456677788888887763
No 482
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.38 E-value=0.056 Score=47.76 Aligned_cols=61 Identities=10% Similarity=-0.001 Sum_probs=45.1
Q ss_pred CCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc----ccCCHHHhcccCCEEEEeccCC
Q 042102 148 GKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK----YYPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~----~~~~l~el~~~aDvV~~~lp~~ 210 (317)
.++|.|.|.|.||+.+++.|...|++|.+.+|+.... .+.. ...+++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 3689999999999999999999999999998876432 1111 112233 78899988877643
No 483
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=93.38 E-value=0.087 Score=45.84 Aligned_cols=92 Identities=18% Similarity=0.148 Sum_probs=56.6
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCC-c----cccCCHHHhcccC----CEEEEeccCCh-h--hhc
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLN-Y----KYYPNLIDLASNC----QILVVACSLTE-E--TQH 215 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~-~----~~~~~l~el~~~a----DvV~~~lp~~~-~--t~~ 215 (317)
|++.|.|. |.||+.+++.|...|++|++.+|+...... . ....++++++++. |+|+.+.-... . -+.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 81 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGN 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHH
Confidence 46777775 689999999999999999988886543211 1 1112344555544 99888764432 0 011
Q ss_pred c----------ccHHHHhccCC--CcEEEEeCCCccc
Q 042102 216 I----------VNRQVINALGP--KGVLINIGRGLLV 240 (317)
Q Consensus 216 l----------i~~~~l~~mk~--gavlVN~~rg~~v 240 (317)
. +.+..++.|++ +..+||++.....
T Consensus 82 ~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 82 VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 12344555543 3789999876544
No 484
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.38 E-value=0.068 Score=49.21 Aligned_cols=65 Identities=18% Similarity=0.151 Sum_probs=46.6
Q ss_pred cccCCeEEEEe-cChhHHHHHHHHhhC-CCEEEEeCCCCCCCC------Ccc--------ccCCHHHhcccCCEEEEecc
Q 042102 145 KFTGKSVGILG-MGRIGTAIAKRAEAF-DCIIGYNSRTEKPNL------NYK--------YYPNLIDLASNCQILVVACS 208 (317)
Q Consensus 145 ~l~g~~vgIiG-~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~------~~~--------~~~~l~el~~~aDvV~~~lp 208 (317)
.+.+++|.|.| .|.||+.+++.|... |++|.+.+|+..... ... ....+.++++.+|+|+-+..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 46789999999 699999999999887 899999988754321 111 11235567889998887654
Q ss_pred C
Q 042102 209 L 209 (317)
Q Consensus 209 ~ 209 (317)
.
T Consensus 101 ~ 101 (372)
T 3slg_A 101 I 101 (372)
T ss_dssp C
T ss_pred c
Confidence 3
No 485
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.32 E-value=0.092 Score=49.05 Aligned_cols=36 Identities=22% Similarity=0.188 Sum_probs=32.1
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCC-CEEEEeCCCCC
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFD-CIIGYNSRTEK 182 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~ 182 (317)
.|.+|.|+|.|.+|...++.++.+| .+|++.+++++
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 231 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPN 231 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHH
Confidence 4789999999999999999999999 59999887653
No 486
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.32 E-value=0.19 Score=46.77 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=59.2
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCccc-----cCCHHHhc---ccCCEEEEeccCChhh
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYKY-----YPNLIDLA---SNCQILVVACSLTEET 213 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~-----~~~l~el~---~~aDvV~~~lp~~~~t 213 (317)
.|++|.|+| .|.+|..+++.++.+|++|++.++..+.. .+... ..++.+.+ ...|+|+-+......+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 588999999 79999999999999999998776322111 12111 12333322 3589998887644221
Q ss_pred hccccHHHHhccCCCcEEEEeCCCc
Q 042102 214 QHIVNRQVINALGPKGVLINIGRGL 238 (317)
Q Consensus 214 ~~li~~~~l~~mk~gavlVN~~rg~ 238 (317)
-...++.++++..+|.++...
T Consensus 263 ----~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 263 ----WAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp ----HGGGGBCSSSCCEEEESCCSH
T ss_pred ----hHHHHHhhcCCcEEEEeCCCc
Confidence 134567789999999998643
No 487
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=93.31 E-value=0.072 Score=49.43 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=27.8
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEEE-eCCC
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIGY-NSRT 180 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~ 180 (317)
.+|||.|||+||+.+++.+..+|++|.+ .|+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~ 40 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPF 40 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 4899999999999999999999998776 5653
No 488
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.30 E-value=0.018 Score=52.84 Aligned_cols=85 Identities=16% Similarity=0.190 Sum_probs=56.1
Q ss_pred cCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC------CCccc-----cCCHHHhc-----ccCCEEEEeccC
Q 042102 147 TGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN------LNYKY-----YPNLIDLA-----SNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~-----~~~l~el~-----~~aDvV~~~lp~ 209 (317)
.|++|.|+|. |.||..+++.++..|++|++.+++.... .+... ..++.+.+ ...|+++.+...
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5789999999 9999999999999999999888764321 11110 11222222 136777766542
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCCC
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGRG 237 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~rg 237 (317)
. .-...++.++++..+|.++..
T Consensus 229 --~----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 --E----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp --H----HHHHHHTTEEEEEEEEECCCG
T ss_pred --c----hHHHHHHHHhhCCEEEEEeec
Confidence 1 124566778888888887643
No 489
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.30 E-value=0.11 Score=47.06 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=43.7
Q ss_pred CeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCC-----Ccc-------ccCCHHHhcccCCEEEEeccC
Q 042102 149 KSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNL-----NYK-------YYPNLIDLASNCQILVVACSL 209 (317)
Q Consensus 149 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~el~~~aDvV~~~lp~ 209 (317)
++|.|.|. |.||+.+++.|...|++|.+.+|+..... +.. ...++.++++.+|+|+.+...
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 58999995 99999999999999999999888654321 111 112356778899988877653
No 490
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.29 E-value=0.11 Score=47.49 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=48.2
Q ss_pred cccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCC----------------CCcc-------ccCCHHHhcccC
Q 042102 145 KFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPN----------------LNYK-------YYPNLIDLASNC 200 (317)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~~~-------~~~~l~el~~~a 200 (317)
.+.+++|.|.|. |.||+.+++.|...|++|.+.+|..... .... ...++.++++.+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 467899999998 9999999999999999999888754310 1111 112355778899
Q ss_pred CEEEEeccC
Q 042102 201 QILVVACSL 209 (317)
Q Consensus 201 DvV~~~lp~ 209 (317)
|+|+.+...
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 988877654
No 491
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=93.21 E-value=0.072 Score=48.91 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=45.1
Q ss_pred CeEEEEecChhHHHHHHHHhhCCCEEE-EeCCCCC-CC---------CC--ccccCCHHHhccc--CCEEEEeccCCh
Q 042102 149 KSVGILGMGRIGTAIAKRAEAFDCIIG-YNSRTEK-PN---------LN--YKYYPNLIDLASN--CQILVVACSLTE 211 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~~-~~---------~~--~~~~~~l~el~~~--aDvV~~~lp~~~ 211 (317)
.+|||||+|.+|+..++.+ .-+++|. ++|+++. .. .+ ...+.+++++++. .|+|++++|...
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSL 79 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcch
Confidence 4899999999999777766 5567765 6777652 11 02 2356789999875 899999988543
No 492
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=93.17 E-value=0.065 Score=50.46 Aligned_cols=29 Identities=28% Similarity=0.204 Sum_probs=23.6
Q ss_pred CeEEEEecChhHHHHHHHHhhC---CCEEEEe
Q 042102 149 KSVGILGMGRIGTAIAKRAEAF---DCIIGYN 177 (317)
Q Consensus 149 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~ 177 (317)
.+|||+|+|.||+.+.+.|... +++|.+.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaI 34 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEE
Confidence 3899999999999999998764 3676544
No 493
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=93.15 E-value=0.2 Score=43.57 Aligned_cols=40 Identities=30% Similarity=0.311 Sum_probs=34.2
Q ss_pred ccccCCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCC
Q 042102 144 TKFTGKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKP 183 (317)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~ 183 (317)
..+.||++.|.|. |.||+.+++.|...|++|++.+|+...
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 51 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA 51 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 3578999999985 799999999999999999988876543
No 494
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.10 E-value=0.058 Score=48.91 Aligned_cols=82 Identities=13% Similarity=0.224 Sum_probs=51.6
Q ss_pred cCCeEEEEecChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCccc-cCCHHHhcccCCEEEEeccCChhhhccccHH
Q 042102 147 TGKSVGILGMGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYKY-YPNLIDLASNCQILVVACSLTEETQHIVNRQ 220 (317)
Q Consensus 147 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~-~~~l~el~~~aDvV~~~lp~~~~t~~li~~~ 220 (317)
.|.+|.|+|.|.+|...++.++.+|++|++.+ +.++. .++.. ..+.+++-...|+++-+.... . . ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~-~----~-~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQ-N----A-AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCch-h----H-HH
Confidence 57899999999999999999999999999888 54332 11110 112222234567766665432 1 1 33
Q ss_pred HHhccCCCcEEEEeC
Q 042102 221 VINALGPKGVLINIG 235 (317)
Q Consensus 221 ~l~~mk~gavlVN~~ 235 (317)
.++.++++..+|.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 566777888777774
No 495
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=93.09 E-value=0.11 Score=46.49 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=45.8
Q ss_pred CCeEEEEec-ChhHHHHHHHHhhCCCEEEEeCCCCCCCCCccccCCHHHhcc--cCCEEEEeccCC
Q 042102 148 GKSVGILGM-GRIGTAIAKRAEAFDCIIGYNSRTEKPNLNYKYYPNLIDLAS--NCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~--~aDvV~~~lp~~ 210 (317)
+++|.|.|. |.||+.+++.|...|++|.+.+++... +.....++.++++ .+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--D~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL--NLLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTC--CTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccC--CccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 578999995 999999999999999999888765322 1222234667777 899988776543
No 496
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.05 E-value=0.064 Score=49.04 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=32.3
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCC
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEK 182 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~ 182 (317)
.|++|.|+| .|.||..+++.++.+|++|++.+++.+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 184 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE 184 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999 899999999999999999998887543
No 497
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.05 E-value=0.051 Score=49.46 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=60.5
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCC----CCcc-----ccCC-HHHhcccCCEEEEeccCChhhhc
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPN----LNYK-----YYPN-LIDLASNCQILVVACSLTEETQH 215 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~-----~~~~-l~el~~~aDvV~~~lp~~~~t~~ 215 (317)
.|.+|.|+| .|.+|...++.++.+|++|++..+..+.. .++. ...+ +.+.+...|+|+-++... .
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~----~ 227 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGD----V 227 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHH----H
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcH----H
Confidence 578999997 99999999999999999988776432211 1111 1123 666667889988886621 1
Q ss_pred cccHHHHhccCCCcEEEEeCC
Q 042102 216 IVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 216 li~~~~l~~mk~gavlVN~~r 236 (317)
+ ...++.++++..+|.++.
T Consensus 228 -~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 228 -G-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp -H-HHHGGGEEEEEEEEECCS
T ss_pred -H-HHHHHhccCCCEEEEeCC
Confidence 2 567888999999999864
No 498
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.04 E-value=0.057 Score=49.72 Aligned_cols=92 Identities=18% Similarity=0.313 Sum_probs=58.6
Q ss_pred CCeEEEEe-cChhHHHHHHHHhhCC--CEEEEeCCCCCCC-------CC----ccc---cCCHHHhcccCCEEEEeccCC
Q 042102 148 GKSVGILG-MGRIGTAIAKRAEAFD--CIIGYNSRTEKPN-------LN----YKY---YPNLIDLASNCQILVVACSLT 210 (317)
Q Consensus 148 g~~vgIiG-~G~iG~~~a~~l~~~G--~~V~~~~~~~~~~-------~~----~~~---~~~l~el~~~aDvV~~~lp~~ 210 (317)
.++|+|+| .|.+|+.++..|...| .+|..+|...... .. ... ..++.+.++.||+|+++.+..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 36899999 8999999999998777 6788888654310 00 111 124678899999999997643
Q ss_pred hhhhcc-------cc----HH---HHhccCCCcEEEEeCCCcccCH
Q 042102 211 EETQHI-------VN----RQ---VINALGPKGVLINIGRGLLVDE 242 (317)
Q Consensus 211 ~~t~~l-------i~----~~---~l~~mk~gavlVN~~rg~~vd~ 242 (317)
.. .+. .| ++ .+....+.+++++.+ .++|.
T Consensus 88 ~~-~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 88 RK-PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp CC-SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 21 110 11 11 222335788888864 55665
No 499
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.04 E-value=0.035 Score=50.64 Aligned_cols=84 Identities=13% Similarity=0.287 Sum_probs=55.5
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCCCCC-----CCcc-----ccCCHHH----hc--ccCCEEEEeccC
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTEKPN-----LNYK-----YYPNLID----LA--SNCQILVVACSL 209 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~-----~~~~l~e----l~--~~aDvV~~~lp~ 209 (317)
.|++|.|+| .|.+|..+++.++..|++|++.++++++. .+.. ...++.+ +. ...|+|+-+...
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 578999999 89999999999999999999888764321 1111 0112222 11 246777776552
Q ss_pred ChhhhccccHHHHhccCCCcEEEEeCC
Q 042102 210 TEETQHIVNRQVINALGPKGVLINIGR 236 (317)
Q Consensus 210 ~~~t~~li~~~~l~~mk~gavlVN~~r 236 (317)
+ .-...++.++++..+|.++.
T Consensus 220 --~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 220 --D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp --G----GHHHHHTTEEEEEEEEECCC
T ss_pred --H----HHHHHHHHhcCCCEEEEEec
Confidence 1 12456677888888888764
No 500
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.03 E-value=0.04 Score=50.18 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=31.7
Q ss_pred cCCeEEEEe-cChhHHHHHHHHhhCCCEEEEeCCCC
Q 042102 147 TGKSVGILG-MGRIGTAIAKRAEAFDCIIGYNSRTE 181 (317)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~ 181 (317)
.|++|.|.| .|.||..+++.++..|++|++.+++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999 79999999999999999999888764
Done!