Query 042108
Match_columns 406
No_of_seqs 376 out of 1649
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:30:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k2o_A Bifunctional arginine d 100.0 1.2E-50 4.1E-55 399.4 18.2 245 160-406 32-291 (336)
2 4gjz_A Lysine-specific demethy 100.0 6.2E-48 2.1E-52 360.7 15.8 221 175-404 2-234 (235)
3 3al5_A HTYW5, JMJC domain-cont 100.0 8E-43 2.7E-47 345.3 13.4 218 172-406 27-275 (338)
4 3d8c_A Hypoxia-inducible facto 100.0 1.6E-41 5.6E-46 337.2 12.1 247 146-405 14-296 (349)
5 2yu1_A JMJC domain-containing 100.0 3.1E-41 1E-45 341.9 10.2 220 173-406 51-301 (451)
6 3k3o_A PHF8, PHD finger protei 100.0 1.2E-38 4E-43 314.3 17.3 217 174-406 17-252 (371)
7 3kv9_A JMJC domain-containing 100.0 8.6E-39 2.9E-43 317.9 9.8 217 174-406 45-280 (397)
8 3pua_A GRC5, PHD finger protei 100.0 3.8E-38 1.3E-42 312.3 11.7 216 175-406 45-279 (392)
9 3kv4_A PHD finger protein 8; e 100.0 8.7E-38 3E-42 316.3 12.2 211 180-406 109-336 (447)
10 3kv5_D JMJC domain-containing 100.0 2.4E-37 8.1E-42 317.4 10.0 216 175-406 137-371 (488)
11 3pur_A Lysine-specific demethy 99.9 4E-28 1.4E-32 246.7 12.3 212 182-406 151-401 (528)
12 1vrb_A Putative asparaginyl hy 99.9 5.9E-27 2E-31 231.7 13.6 204 177-403 23-252 (342)
13 2xdv_A MYC-induced nuclear ant 99.8 1.1E-20 3.9E-25 192.0 10.5 196 179-402 23-233 (442)
14 4diq_A Lysine-specific demethy 99.8 1.8E-18 6.3E-23 175.7 15.8 98 289-404 163-263 (489)
15 2ypd_A Probable JMJC domain-co 99.7 2.3E-17 7.9E-22 161.2 7.0 220 183-406 23-328 (392)
16 2xxz_A Lysine-specific demethy 99.1 5.4E-10 1.8E-14 108.4 10.9 206 191-406 32-314 (332)
17 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 1.2E-10 4E-15 83.2 3.3 46 62-107 7-52 (53)
18 3avr_A Lysine-specific demethy 99.0 3.5E-09 1.2E-13 108.6 15.1 209 191-406 90-373 (531)
19 3l2o_B F-box only protein 4; s 98.8 1.4E-09 4.6E-14 104.0 3.7 52 62-113 3-54 (312)
20 2e31_A FBS1, F-box only protei 98.8 2.9E-09 9.8E-14 102.5 5.9 68 62-129 49-121 (297)
21 2ovr_B FBW7, F-BOX/WD repeat p 98.5 6.2E-08 2.1E-12 96.6 6.1 70 61-130 16-97 (445)
22 1p22_A F-BOX/WD-repeat protein 98.4 7E-08 2.4E-12 96.2 2.6 53 62-114 9-65 (435)
23 3dxt_A JMJC domain-containing 98.4 1.5E-06 5.2E-11 84.7 11.8 111 290-406 176-297 (354)
24 3v7d_B Cell division control p 98.4 1.6E-07 5.4E-12 93.8 4.3 51 62-112 13-64 (464)
25 4ask_A Lysine-specific demethy 98.4 1.9E-06 6.4E-11 87.3 11.4 209 191-405 66-347 (510)
26 3opt_A DNA damage-responsive t 98.1 1.4E-05 4.8E-10 78.3 11.2 111 291-406 220-340 (373)
27 2ox0_A JMJC domain-containing 97.9 2.6E-05 8.9E-10 77.0 8.7 111 290-406 194-315 (381)
28 2ast_B S-phase kinase-associat 97.2 0.00011 3.6E-09 70.5 1.7 49 62-110 7-55 (336)
29 4hfx_A Transcription elongatio 96.4 0.0013 4.5E-08 52.2 2.3 60 67-128 13-73 (97)
30 2e9q_A 11S globulin subunit be 96.4 0.0086 2.9E-07 60.8 8.8 65 298-398 330-394 (459)
31 3ksc_A LEGA class, prolegumin; 96.4 0.01 3.4E-07 60.8 9.2 69 294-399 363-431 (496)
32 3c3v_A Arachin ARAH3 isoform; 96.2 0.013 4.3E-07 60.3 9.2 67 298-400 380-446 (510)
33 1fxz_A Glycinin G1; proglycini 96.2 0.014 4.8E-07 59.6 9.3 70 294-400 343-412 (476)
34 3fz3_A Prunin; TREE NUT allerg 96.2 0.011 3.6E-07 60.7 8.1 71 293-400 398-468 (531)
35 3kgl_A Cruciferin; 11S SEED gl 95.9 0.021 7.1E-07 58.0 8.9 66 294-396 328-393 (466)
36 3qac_A 11S globulin SEED stora 95.7 0.027 9.3E-07 57.1 8.7 63 299-397 332-394 (465)
37 3fjs_A Uncharacterized protein 95.6 0.049 1.7E-06 44.0 8.6 61 298-401 44-104 (114)
38 2d5f_A Glycinin A3B4 subunit; 95.6 0.033 1.1E-06 57.1 8.8 66 298-399 375-440 (493)
39 1fi2_A Oxalate oxidase, germin 95.5 0.042 1.4E-06 49.2 8.4 65 298-396 80-144 (201)
40 1x82_A Glucose-6-phosphate iso 95.5 0.043 1.5E-06 48.8 8.3 58 303-396 86-144 (190)
41 2p1m_B Transport inhibitor res 95.5 0.0064 2.2E-07 62.6 3.2 35 63-97 5-40 (594)
42 2d40_A Z3393, putative gentisa 95.3 0.048 1.7E-06 53.4 8.8 63 296-401 274-336 (354)
43 2y0o_A Probable D-lyxose ketol 95.3 0.11 3.6E-06 45.8 9.8 86 294-400 57-148 (175)
44 2pfw_A Cupin 2, conserved barr 95.3 0.061 2.1E-06 43.0 7.8 62 298-402 42-103 (116)
45 3lag_A Uncharacterized protein 95.2 0.0066 2.3E-07 48.2 1.7 25 372-396 60-84 (98)
46 4e2g_A Cupin 2 conserved barre 95.2 0.061 2.1E-06 43.7 7.8 63 296-401 47-110 (126)
47 3st7_A Capsular polysaccharide 95.1 0.048 1.7E-06 52.9 8.1 74 293-403 275-351 (369)
48 2vqa_A SLL1358 protein, MNCA; 95.1 0.07 2.4E-06 51.9 9.2 60 299-395 61-120 (361)
49 1dgw_A Canavalin; duplicated s 95.0 0.022 7.5E-07 50.2 4.9 60 298-396 49-108 (178)
50 2gm6_A Cysteine dioxygenase ty 95.0 0.07 2.4E-06 48.3 8.3 78 291-400 80-162 (208)
51 2ozj_A Cupin 2, conserved barr 95.0 0.16 5.4E-06 40.5 9.6 63 298-403 46-108 (114)
52 3bu7_A Gentisate 1,2-dioxygena 94.9 0.083 2.8E-06 52.5 9.2 25 371-395 332-356 (394)
53 1yhf_A Hypothetical protein SP 94.8 0.16 5.6E-06 40.3 9.3 62 298-402 48-109 (115)
54 2cav_A Protein (canavalin); vi 94.8 0.05 1.7E-06 55.0 7.4 72 299-396 290-361 (445)
55 1uij_A Beta subunit of beta co 94.8 0.044 1.5E-06 54.9 7.0 75 299-396 258-332 (416)
56 1zvf_A 3-hydroxyanthranilate 3 94.7 0.14 4.8E-06 44.7 9.0 76 290-400 34-109 (176)
57 3kgz_A Cupin 2 conserved barre 94.7 0.088 3E-06 45.3 7.7 56 298-396 52-107 (156)
58 2phl_A Phaseolin; plant SEED s 94.7 0.05 1.7E-06 54.1 6.9 68 299-396 248-315 (397)
59 1yfu_A 3-hydroxyanthranilate-3 94.6 0.1 3.4E-06 45.7 7.9 71 291-400 36-107 (174)
60 1j58_A YVRK protein; cupin, de 94.6 0.083 2.8E-06 52.0 8.4 61 298-396 87-147 (385)
61 2vqa_A SLL1358 protein, MNCA; 94.5 0.092 3.2E-06 51.1 8.4 62 298-396 242-303 (361)
62 2fqp_A Hypothetical protein BP 94.5 0.077 2.6E-06 41.3 6.3 25 372-396 60-84 (97)
63 2o8q_A Hypothetical protein; c 94.4 0.15 5E-06 42.0 8.2 56 299-396 52-108 (134)
64 2ea7_A 7S globulin-1; beta bar 94.3 0.063 2.1E-06 54.1 6.7 74 299-396 275-348 (434)
65 3eqe_A Putative cystein deoxyg 94.3 0.14 4.8E-06 44.9 8.1 77 293-402 72-148 (171)
66 2b8m_A Hypothetical protein MJ 94.1 0.18 6E-06 40.4 7.9 57 298-397 35-92 (117)
67 3ibm_A Cupin 2, conserved barr 94.1 0.25 8.5E-06 42.8 9.3 55 298-395 64-118 (167)
68 1lr5_A Auxin binding protein 1 94.0 0.43 1.5E-05 40.7 10.7 64 298-395 49-112 (163)
69 3nw4_A Gentisate 1,2-dioxygena 94.0 0.058 2E-06 53.1 5.7 62 293-396 106-167 (368)
70 3h8u_A Uncharacterized conserv 93.9 0.11 3.9E-06 42.0 6.4 58 298-396 47-104 (125)
71 3rns_A Cupin 2 conserved barre 93.9 0.19 6.6E-06 45.7 8.7 63 297-402 44-106 (227)
72 1v70_A Probable antibiotics sy 93.9 0.31 1.1E-05 37.4 8.7 57 298-396 36-92 (105)
73 3nw4_A Gentisate 1,2-dioxygena 93.9 0.26 8.9E-06 48.4 9.9 64 297-403 286-349 (368)
74 3jzv_A Uncharacterized protein 93.8 0.16 5.4E-06 44.2 7.5 56 298-396 61-116 (166)
75 3bu7_A Gentisate 1,2-dioxygena 93.8 0.081 2.8E-06 52.6 6.2 57 298-396 131-188 (394)
76 3ht1_A REMF protein; cupin fol 93.8 0.12 3.9E-06 42.9 6.4 58 298-396 47-104 (145)
77 3ogk_B Coronatine-insensitive 93.7 0.022 7.5E-07 58.5 2.1 33 65-97 14-47 (592)
78 2gu9_A Tetracenomycin polyketi 93.6 0.2 6.8E-06 39.3 7.2 57 298-396 29-87 (113)
79 3lwc_A Uncharacterized protein 93.5 0.34 1.1E-05 39.6 8.6 56 296-395 46-101 (119)
80 2bnm_A Epoxidase; oxidoreducta 93.2 0.37 1.3E-05 42.3 9.1 24 371-394 162-185 (198)
81 3ejk_A DTDP sugar isomerase; Y 93.1 0.47 1.6E-05 41.6 9.4 73 293-396 56-131 (174)
82 2xlg_A SLL1785 protein, CUCA; 93.1 0.098 3.3E-06 48.4 5.3 79 296-396 49-127 (239)
83 4i4a_A Similar to unknown prot 93.1 0.37 1.3E-05 39.0 8.3 55 299-396 43-97 (128)
84 1y3t_A Hypothetical protein YX 93.0 0.4 1.4E-05 45.7 9.7 59 296-397 52-111 (337)
85 1uij_A Beta subunit of beta co 92.8 0.16 5.5E-06 50.8 6.7 63 293-395 53-115 (416)
86 2d40_A Z3393, putative gentisa 92.7 0.16 5.6E-06 49.6 6.5 57 298-396 108-164 (354)
87 1j58_A YVRK protein; cupin, de 92.6 0.22 7.4E-06 48.9 7.2 62 298-396 265-326 (385)
88 2ea7_A 7S globulin-1; beta bar 92.5 0.22 7.4E-06 50.1 7.3 63 293-395 65-127 (434)
89 3cew_A Uncharacterized cupin p 92.5 0.57 1.9E-05 37.8 8.7 24 372-395 67-90 (125)
90 3uss_A Putative uncharacterize 92.4 0.4 1.4E-05 43.4 8.2 78 292-401 75-155 (211)
91 4axo_A EUTQ, ethanolamine util 92.2 0.13 4.3E-06 44.3 4.3 33 371-403 102-134 (151)
92 3l2h_A Putative sugar phosphat 92.1 0.71 2.4E-05 39.2 9.2 57 298-396 54-112 (162)
93 3eln_A Cysteine dioxygenase ty 92.1 0.94 3.2E-05 40.5 10.2 79 293-401 73-153 (200)
94 3bb6_A Uncharacterized protein 92.0 0.7 2.4E-05 38.3 8.5 62 311-405 38-99 (127)
95 1o4t_A Putative oxalate decarb 91.8 0.5 1.7E-05 38.9 7.6 62 298-402 65-129 (133)
96 3i7d_A Sugar phosphate isomera 91.8 0.77 2.6E-05 39.4 9.1 25 372-396 84-110 (163)
97 2qnk_A 3-hydroxyanthranilate 3 91.5 0.48 1.6E-05 44.5 7.6 73 290-401 31-103 (286)
98 3rns_A Cupin 2 conserved barre 91.1 0.53 1.8E-05 42.7 7.6 59 298-399 161-220 (227)
99 1y3t_A Hypothetical protein YX 91.0 1 3.4E-05 42.9 9.8 59 295-396 223-282 (337)
100 3d82_A Cupin 2, conserved barr 90.9 0.19 6.5E-06 38.7 3.8 29 372-400 69-97 (102)
101 1o5u_A Novel thermotoga mariti 90.9 0.23 8E-06 39.4 4.3 26 372-397 69-94 (101)
102 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 90.8 1.2 4.1E-05 39.4 9.4 82 292-404 50-134 (185)
103 2ixk_A DTDP-4-dehydrorhamnose 90.5 1.2 4.1E-05 39.3 9.0 82 292-404 51-135 (184)
104 3h7j_A Bacilysin biosynthesis 90.3 0.44 1.5E-05 43.7 6.3 30 372-401 185-216 (243)
105 2f4p_A Hypothetical protein TM 90.2 0.88 3E-05 38.2 7.7 57 298-396 56-112 (147)
106 2opk_A Hypothetical protein; p 90.2 0.32 1.1E-05 39.0 4.7 31 373-403 75-108 (112)
107 3h7j_A Bacilysin biosynthesis 89.8 0.78 2.7E-05 42.0 7.6 61 297-400 41-104 (243)
108 3s7i_A Allergen ARA H 1, clone 89.8 0.37 1.3E-05 48.2 5.6 84 299-396 272-357 (418)
109 2q30_A Uncharacterized protein 89.3 0.36 1.2E-05 37.7 4.2 28 372-399 75-102 (110)
110 4b29_A Dimethylsulfoniopropion 89.2 1.2 4.1E-05 40.4 8.1 59 296-396 138-196 (217)
111 2oa2_A BH2720 protein; 1017534 89.1 0.35 1.2E-05 40.7 4.3 63 298-396 51-113 (148)
112 1vj2_A Novel manganese-contain 88.8 0.78 2.7E-05 37.3 6.1 56 298-396 56-111 (126)
113 2pa7_A DTDP-6-deoxy-3,4-keto-h 88.7 1.5 5.2E-05 36.9 8.0 64 298-399 43-108 (141)
114 1fxz_A Glycinin G1; proglycini 88.7 1.1 3.6E-05 45.7 8.2 87 293-396 52-138 (476)
115 1oi6_A PCZA361.16; epimerase, 88.6 2.8 9.6E-05 37.6 10.1 77 291-397 48-128 (205)
116 2e9q_A 11S globulin subunit be 88.4 0.84 2.9E-05 46.1 7.3 85 294-396 68-152 (459)
117 2cav_A Protein (canavalin); vi 88.3 0.55 1.9E-05 47.3 5.8 59 298-395 94-152 (445)
118 2i45_A Hypothetical protein; n 88.2 0.45 1.5E-05 37.3 4.1 27 372-398 68-94 (107)
119 1dzr_A DTDP-4-dehydrorhamnose 88.1 2.5 8.4E-05 37.3 9.2 81 292-403 49-133 (183)
120 1juh_A Quercetin 2,3-dioxygena 87.9 1.2 4.2E-05 43.1 7.9 56 300-397 262-317 (350)
121 2pyt_A Ethanolamine utilizatio 87.9 0.49 1.7E-05 39.4 4.3 30 372-401 94-123 (133)
122 3bcw_A Uncharacterized protein 87.6 0.4 1.4E-05 39.4 3.6 28 372-399 88-115 (123)
123 3ryk_A DTDP-4-dehydrorhamnose 87.4 4.3 0.00015 36.4 10.5 77 291-397 70-151 (205)
124 1y9q_A Transcriptional regulat 87.2 1.5 5E-05 38.3 7.3 26 371-396 144-169 (192)
125 1upi_A DTDP-4-dehydrorhamnose 87.0 4.2 0.00014 37.0 10.3 77 291-397 67-147 (225)
126 1vr3_A Acireductone dioxygenas 87.0 2.5 8.5E-05 37.5 8.6 55 304-396 98-152 (191)
127 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 87.0 2.1 7.1E-05 38.2 8.1 74 291-397 61-135 (197)
128 3s7i_A Allergen ARA H 1, clone 86.9 0.86 2.9E-05 45.5 6.2 63 294-396 49-111 (418)
129 2vpv_A Protein MIF2, MIF2P; nu 86.8 1.7 5.7E-05 37.8 7.2 56 300-397 99-154 (166)
130 2d5f_A Glycinin A3B4 subunit; 86.5 1.6 5.3E-05 44.6 7.9 89 293-396 49-138 (493)
131 1zrr_A E-2/E-2' protein; nicke 85.9 0.64 2.2E-05 40.9 4.1 26 371-396 122-147 (179)
132 1juh_A Quercetin 2,3-dioxygena 85.8 2.7 9.4E-05 40.7 9.1 65 296-397 54-120 (350)
133 2c0z_A NOVW; isomerase, epimer 85.0 4.2 0.00014 36.8 9.2 77 291-397 56-136 (216)
134 2ozi_A Hypothetical protein RP 84.2 0.49 1.7E-05 37.2 2.3 25 372-396 60-84 (98)
135 3es1_A Cupin 2, conserved barr 84.0 1.4 4.9E-05 38.4 5.4 56 298-396 87-142 (172)
136 1wlt_A 176AA long hypothetical 83.6 5.1 0.00017 35.7 9.0 75 293-397 68-146 (196)
137 1sef_A Conserved hypothetical 83.2 3.4 0.00011 38.4 8.1 25 372-396 222-246 (274)
138 3qac_A 11S globulin SEED stora 82.8 3.1 0.00011 42.1 8.0 102 293-401 54-162 (465)
139 4h7l_A Uncharacterized protein 82.1 2.2 7.4E-05 36.7 5.7 22 372-393 87-108 (157)
140 3c3v_A Arachin ARAH3 isoform; 81.0 3.2 0.00011 42.4 7.5 95 293-396 52-151 (510)
141 3kgl_A Cruciferin; 11S SEED gl 79.6 3.2 0.00011 41.9 6.9 39 293-334 47-85 (466)
142 3ksc_A LEGA class, prolegumin; 78.5 5.6 0.00019 40.5 8.3 91 293-401 50-142 (496)
143 2phl_A Phaseolin; plant SEED s 78.0 2.4 8.4E-05 41.9 5.4 63 293-395 56-124 (397)
144 3dl3_A Tellurite resistance pr 77.9 11 0.00037 30.7 8.3 65 306-404 32-96 (119)
145 4hn1_A Putative 3-epimerase in 77.1 17 0.00058 32.3 10.1 79 291-399 45-127 (201)
146 2rg4_A Uncharacterized protein 74.1 7.1 0.00024 35.0 7.0 35 371-405 169-206 (216)
147 3d0j_A Uncharacterized protein 73.3 3.1 0.00011 35.0 4.0 63 302-398 41-103 (140)
148 1sq4_A GLXB, glyoxylate-induce 70.5 3.5 0.00012 38.6 4.2 25 372-396 109-133 (278)
149 1rc6_A Hypothetical protein YL 69.1 3.2 0.00011 38.2 3.6 25 372-396 100-124 (261)
150 1rc6_A Hypothetical protein YL 68.5 3.1 0.00011 38.3 3.3 25 372-396 219-243 (261)
151 1zx5_A Mannosephosphate isomer 68.4 3.5 0.00012 39.1 3.7 31 371-402 158-188 (300)
152 1sef_A Conserved hypothetical 67.6 3.6 0.00012 38.2 3.6 25 372-396 103-127 (274)
153 2qnk_A 3-hydroxyanthranilate 3 67.2 19 0.00066 33.7 8.3 33 371-403 244-276 (286)
154 1sfn_A Conserved hypothetical 66.2 4.6 0.00016 36.9 3.9 26 372-397 87-112 (246)
155 1qwr_A Mannose-6-phosphate iso 64.6 4.4 0.00015 38.7 3.6 24 371-394 158-181 (319)
156 2wfp_A Mannose-6-phosphate iso 64.4 5.2 0.00018 39.5 4.2 31 371-402 240-270 (394)
157 1pmi_A PMI, phosphomannose iso 62.8 6 0.00021 39.6 4.3 31 371-402 266-296 (440)
158 1sfn_A Conserved hypothetical 61.5 5.8 0.0002 36.2 3.7 26 371-396 204-229 (246)
159 3es4_A Uncharacterized protein 60.5 4.3 0.00015 33.0 2.3 24 372-395 81-104 (116)
160 2arc_A ARAC, arabinose operon 59.0 12 0.00041 30.7 5.0 25 371-395 56-80 (164)
161 1dgw_Y Canavalin; duplicated s 56.6 11 0.00037 29.3 3.9 26 370-395 5-30 (93)
162 4e2q_A Ureidoglycine aminohydr 55.1 8.5 0.00029 35.8 3.6 27 372-398 110-136 (266)
163 2o1q_A Putative acetyl/propion 54.7 7.7 0.00026 32.3 3.0 29 373-401 86-115 (145)
164 4e2q_A Ureidoglycine aminohydr 53.5 9.5 0.00033 35.5 3.7 25 372-396 226-250 (266)
165 3kmh_A D-lyxose isomerase; cup 52.6 36 0.0012 31.1 7.1 88 294-396 110-197 (246)
166 1yud_A Hypothetical protein SO 51.7 88 0.003 26.9 9.3 21 375-395 101-123 (170)
167 1sq4_A GLXB, glyoxylate-induce 49.3 8.9 0.00031 35.7 2.8 26 371-396 230-255 (278)
168 3i3q_A Alpha-ketoglutarate-dep 48.1 85 0.0029 27.8 9.0 32 371-402 156-199 (211)
169 3ebr_A Uncharacterized RMLC-li 44.3 15 0.00051 31.3 3.2 28 374-401 81-112 (159)
170 2q1z_B Anti-sigma factor CHRR, 40.6 23 0.00077 31.1 3.9 28 374-401 162-191 (195)
171 3myx_A Uncharacterized protein 39.6 16 0.00055 33.4 2.8 17 372-388 206-222 (238)
172 3fz3_A Prunin; TREE NUT allerg 39.1 15 0.00051 37.6 2.7 39 293-334 52-90 (531)
173 3cjx_A Protein of unknown func 37.9 22 0.00074 30.5 3.2 60 298-401 51-114 (165)
174 3gbg_A TCP pilus virulence reg 30.7 51 0.0017 29.7 4.8 23 372-394 50-72 (276)
175 2x3w_D Syndapin I, protein kin 29.6 41 0.0014 22.8 3.0 22 372-393 19-45 (60)
176 2a28_A BZZ1 protein; SH3 domai 26.2 57 0.002 21.5 3.2 21 372-392 16-41 (54)
177 2ct4_A CDC42-interacting prote 25.0 53 0.0018 23.1 3.0 22 372-393 23-49 (70)
178 3myx_A Uncharacterized protein 25.0 70 0.0024 29.1 4.5 26 371-396 83-108 (238)
179 1zuy_A Myosin-5 isoform; SH3 d 24.5 63 0.0022 21.5 3.2 22 372-393 17-42 (58)
180 1cka_A C-CRK N-terminal SH3 do 22.5 64 0.0022 21.5 2.9 20 372-391 17-40 (57)
181 1s1n_A Nephrocystin 1; beta ba 21.6 59 0.002 22.6 2.7 20 372-391 26-49 (68)
182 4esr_A Jouberin; AHI-1, AHI1, 21.6 73 0.0025 22.2 3.2 21 372-392 22-46 (69)
183 4e6r_A Cytoplasmic protein NCK 21.4 73 0.0025 21.2 3.0 19 372-390 17-39 (58)
184 2eyx_A V-CRK sarcoma virus CT1 21.3 69 0.0024 22.3 3.0 22 372-393 24-49 (67)
185 2vwf_A Growth factor receptor- 21.2 74 0.0025 21.2 3.1 21 372-392 18-42 (58)
186 1y0m_A 1-phosphatidylinositol- 21.1 60 0.002 22.1 2.5 21 372-392 19-43 (61)
187 1oot_A Hypothetical 40.4 kDa p 20.6 77 0.0026 21.3 3.1 21 372-392 19-45 (60)
No 1
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=1.2e-50 Score=399.38 Aligned_cols=245 Identities=39% Similarity=0.796 Sum_probs=209.3
Q ss_pred hhhcccCCcCcccCCCcccc--CCCCHHHHHHHhcCCCCCEEEecCCCcCcccCCCCHHHHHHHhCCceEEEc------c
Q 042108 160 LCANLEMKPEWLERDNIARK--KCISVEEFVSSFEEPNKPVLLEGCLDNWAALKKWDRDYLVNVCGDVRFAVG------P 231 (406)
Q Consensus 160 ~c~~~~~~~~~~~~~~I~r~--~~ls~e~F~~~y~~~~~PvIi~~~~~~Wpa~~~Wt~~~L~~~~gd~~v~v~------~ 231 (406)
+|..+++.+. ....+|+|+ +.+|+++|.++|+.+++||||+|++++|||+++|+++||++++|+.+|.++ .
T Consensus 32 ~~~~~~~~~~-~~~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~yL~~~~G~~~V~v~~~~~~~~ 110 (336)
T 3k2o_A 32 YYESFSLSPA-AVADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYS 110 (336)
T ss_dssp HHHHCCCCGG-GCCCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTTTCTHHHHCSHHHHHHHSTTCEEEEEECTTSCE
T ss_pred hhhhhhhchh-hcCCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcCCChhHhhhhHHHHHHHhCCceEEEEecCCCce
Confidence 3455554332 146789999 579999999999999999999999999999999999999999999999986 4
Q ss_pred eecchHHHHHhhhccCCCCCeeecCccccc--ccCccccCCCCCCcChhhhhhhcCC-CCCCcceeEeccCCCCCcceec
Q 042108 232 VEMKLEEYFRYSDSVREERPLYLFDPKFAD--KVPTLGGEYEVPVYFREDLFSVLGN-ERPDYRWVIIGPAGSGSSFHMD 308 (406)
Q Consensus 232 ~~~~l~~f~~~~~~~~~~~~~Yl~d~~~~~--~~p~L~~d~~~P~~f~~d~~~~l~~-~rp~~~~l~iG~~gs~t~~H~D 308 (406)
+.|+|++|++|+.+..++.++||++..+.+ .+|+|.+||.+|++|.+|+|+.+++ .+++++|+|||++|++|++|+|
T Consensus 111 ~~m~~~~fl~~~~~~~~~~~lYL~d~~~~e~~~~p~L~~dy~~P~~f~~d~~~~~~~~~~p~~~~~~~G~~gs~t~~H~D 190 (336)
T 3k2o_A 111 VKMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHID 190 (336)
T ss_dssp EEEEHHHHHHHHHHCCCSSCCCEEESCGGGSTTGGGGGGGCCCCGGGCCCGGGGGCTTTSCCCEEEEEECTTCEEEEECC
T ss_pred eeecHHHHHHHHHhcCCCCCceEecccccccccchhHHHhcCCCcccccchhhhcccccCCCceEEEECCCCccCCcccC
Confidence 789999999999988888899999988764 4899999999999999999988876 4889999999999999999999
Q ss_pred CCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcC----CCCcEEEEEcCCCEEEeC
Q 042108 309 PNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNW----KKRPIECICKAGEVIFVP 384 (406)
Q Consensus 309 ~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~----~~~~~~~vl~pGD~LfIP 384 (406)
+++|+||++||.|+|+|+||||++.. .+|+......-..+.+..+|+.+.||.++.. .+++++|+|+|||+||||
T Consensus 191 ~~~~~~~~~~v~G~K~~~L~pP~~~~-~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~~l~pGd~l~iP 269 (336)
T 3k2o_A 191 PLGTSAWNALVQGHKRWCLFPTSTPR-ELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVP 269 (336)
T ss_dssp GGGCEEEEEEEESCEEEEEECTTSCH-HHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCEEEEECTTCEEEEC
T ss_pred CCccceeeEEEeeeEEEEEeCCCcch-hcccCcccccCCCccchhhhhhhhCcchhhhcccccCceEEEEECCCCEEEeC
Confidence 99999999999999999999999865 5665321100011234568998899987532 246799999999999999
Q ss_pred CCCeeeeeecCccEEEeeeccC
Q 042108 385 NGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 385 ~gWwH~V~nl~~sIavt~nFv~ 406 (406)
+||||+|.|+++||+||+||++
T Consensus 270 ~gw~H~v~~~~~sisv~~~f~~ 291 (336)
T 3k2o_A 270 GGWWHVVLNLDTTIAITQNFAS 291 (336)
T ss_dssp TTCEEEEEESSCEEEEEEEECC
T ss_pred CCCcEEEecCCCeEEEEcccCC
Confidence 9999999999999999999985
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=6.2e-48 Score=360.70 Aligned_cols=221 Identities=23% Similarity=0.413 Sum_probs=194.4
Q ss_pred CccccCCCCHHHHHHHhcCCCCCEEEecCCCcCcccCCCCHHHHHHHhCCceEEEc-----------ceecchHHHHHhh
Q 042108 175 NIARKKCISVEEFVSSFEEPNKPVLLEGCLDNWAALKKWDRDYLVNVCGDVRFAVG-----------PVEMKLEEYFRYS 243 (406)
Q Consensus 175 ~I~r~~~ls~e~F~~~y~~~~~PvIi~~~~~~Wpa~~~Wt~~~L~~~~gd~~v~v~-----------~~~~~l~~f~~~~ 243 (406)
+|+|++.+|+++|.++|+.+++||||+|++++|||+++|+.+||++++|+..|.++ ...|+|++|++++
T Consensus 2 tipri~~pS~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~~~yL~~~~g~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (235)
T 4gjz_A 2 TVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKY 81 (235)
T ss_dssp BCCEEESCCHHHHHHHTTTTTCCEEEESSSTTSHHHHHCSHHHHHHHHTTSEEEEEEC-------CEEEEEEHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHhcCCCcEEEeCCCcCCcccccCCHHHHHHHcCCCeEEEEecCcccCCccceeeccHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999998874 2569999999988
Q ss_pred hccCCCCCeeecCcccccccCccccCCCCCCcChhhhhhhcCCCCCCcceeEeccCCCCCcceecCCCCcceEEEEEeEE
Q 042108 244 DSVREERPLYLFDPKFADKVPTLGGEYEVPVYFREDLFSVLGNERPDYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSK 323 (406)
Q Consensus 244 ~~~~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~d~~~~l~~~rp~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K 323 (406)
.........|+++..+.+..++|.+++.+|.++..+.+ ...+...++|||++|++|++|+|+++ ||++||.|+|
T Consensus 82 ~~~~~~~~~y~~~~~~~~~~~~l~~d~~~p~~~~~~~~----~~~~~~~~~wiG~~gs~t~~H~D~~~--n~~~qv~G~K 155 (235)
T 4gjz_A 82 IVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG----EEEEITINAWFGPQGTISPLHQDPQQ--NFLVQVMGRK 155 (235)
T ss_dssp TSSCCSSCEEEEEECHHHHCHHHHTTCCCCGGGGGSSS----CGGGCEEEEEEECTTCEEEEECCSSE--EEEEEEESCE
T ss_pred hhcCCcccceeehhhhhhhhHHHHHhhcCCcccccccc----ccCccceEEEEeCCCCCceeeecccc--ceEEEEeeeE
Confidence 87777788999999888899999999999987653321 12345678999999999999999987 9999999999
Q ss_pred EEEEeCCCCCCCCcccCCCC-CcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEee
Q 042108 324 KWILFPPDVVPPGVHPSSDG-AEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 324 ~w~L~pP~~~~~~l~p~~d~-~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
+|+||||++.+ .+|+.... ....+++++.+++++.||.+++ +++++|+|+|||+||||+||||+|+|+++|||||.
T Consensus 156 ~w~L~pP~~~~-~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~--~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~ 232 (235)
T 4gjz_A 156 YIRLYSPQESG-ALYPHDTHLLHNTSQVDVENPDLEKFPKFAK--APFLSCILSPGEILFIPVKYWHYVRALDLSFSVSF 232 (235)
T ss_dssp EEEEECGGGGG-GSCBCSSTTTTTBBSSCTTSCCTTTCGGGGG--CCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eeEEcCccccc-ccccCcccccCccccccccCcchhhCccccC--CCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEE
Confidence 99999999987 67775432 2345778888888999999986 46799999999999999999999999999999999
Q ss_pred ec
Q 042108 403 NY 404 (406)
Q Consensus 403 nF 404 (406)
||
T Consensus 233 w~ 234 (235)
T 4gjz_A 233 WW 234 (235)
T ss_dssp EE
T ss_pred ec
Confidence 98
No 3
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=100.00 E-value=8e-43 Score=345.34 Aligned_cols=218 Identities=23% Similarity=0.377 Sum_probs=185.0
Q ss_pred cCCCccccCCCCHHHHHHHhcCCCCCEEEecCCCcCcccCCCCHHHHHHHhCCceEEEcc---------------eecch
Q 042108 172 ERDNIARKKCISVEEFVSSFEEPNKPVLLEGCLDNWAALKKWDRDYLVNVCGDVRFAVGP---------------VEMKL 236 (406)
Q Consensus 172 ~~~~I~r~~~ls~e~F~~~y~~~~~PvIi~~~~~~Wpa~~~Wt~~~L~~~~gd~~v~v~~---------------~~~~l 236 (406)
...+|+|++.+|+++|.++|+.+++||||+| +++|||+++||++||++++|+..|.++. +.|+|
T Consensus 27 ~~~~I~r~~~lS~~eF~~~y~~~~kPvVi~g-~~~wpa~~~Ws~dyL~~~~g~~~V~v~~~~~~~~~~~~~~~~~~~~~f 105 (338)
T 3al5_A 27 QHLPVPRLEGVSREQFMQHLYPQRKPLVLEG-IDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPF 105 (338)
T ss_dssp CCCBCCEEESCCHHHHHHHTGGGCCCEEEES-CCCCTHHHHCCHHHHHHHHCSCEEEEEC----CCCC-CCCCCEEEEEH
T ss_pred CCCCCCEECCCCHHHHHHHhhcCCCeEEEeC-CCCCcccccCCHHHHHHhhCCceEEEEEcCCCCcccccccceeEEeEH
Confidence 4578999999999999999998999999999 8899999999999999999999888751 35999
Q ss_pred HHHHHhhhccCC-------CCCeeecCc---------ccccccCccccCCCCCCcChhhhhhhcCCCCCCcceeEeccCC
Q 042108 237 EEYFRYSDSVRE-------ERPLYLFDP---------KFADKVPTLGGEYEVPVYFREDLFSVLGNERPDYRWVIIGPAG 300 (406)
Q Consensus 237 ~~f~~~~~~~~~-------~~~~Yl~d~---------~~~~~~p~L~~d~~~P~~f~~d~~~~l~~~rp~~~~l~iG~~g 300 (406)
++|++++.+..+ ..++||++. .+.+++|+|.+||.+|.+|..|.+. ..++|||++|
T Consensus 106 ~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~~P~~~~~d~~~--------~s~l~~g~~g 177 (338)
T 3al5_A 106 DQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFF--------SSVFRISSPG 177 (338)
T ss_dssp HHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCCCCCCSCGGGEE--------EEEEEEECTT
T ss_pred HHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcCCCccccccccc--------cceeEECCCC
Confidence 999999865432 356899864 3566789999999999998765432 3589999999
Q ss_pred CCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCE
Q 042108 301 SGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEV 380 (406)
Q Consensus 301 s~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~ 380 (406)
+++++|+|+++ ||++||.|+|+|+||||.+.+ .+|+..+. .+.+++.+++++.||.++. ++.++++|+|||+
T Consensus 178 ~~~~~H~D~~~--n~~~qv~G~K~w~L~pP~~~~-~ly~~~~~---~~~~d~~~~d~~~~p~~~~--~~~~~~~L~pGD~ 249 (338)
T 3al5_A 178 LQLWTHYDVMD--NLLIQVTGKKRVVLFSPRDAQ-YLYLKGTK---SEVLNIDNPDLAKYPLFSK--ARRYECSLEAGDV 249 (338)
T ss_dssp CEEEEECCSSE--EEEEECSSCEEEEEECGGGGG-GGTEETTE---ESCCCSSSCCTTTCTTGGG--CCEEEEEECTTCE
T ss_pred CCccceECCcc--cEEEEEEEEEEEEEECccccc-ccccCCCC---cccccCCCcchhhCccccc--CCCEEEEECCCCE
Confidence 99999999997 999999999999999999876 78885432 2334555666788998875 3679999999999
Q ss_pred EEeCCCCeeeeeecCccEEEeeeccC
Q 042108 381 IFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 381 LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
||||+||||+|+|++.|||||.+|.+
T Consensus 250 LyiP~gWwH~v~~l~~sisvn~~~~~ 275 (338)
T 3al5_A 250 LFIPALWFHNVISEEFGVGVNIFWKH 275 (338)
T ss_dssp EEECTTCEEEEEESSCEEEEEEEECS
T ss_pred EEECCCCeEEEeeCCCEEEEEEEecC
Confidence 99999999999999999999999963
No 4
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=100.00 E-value=1.6e-41 Score=337.16 Aligned_cols=247 Identities=23% Similarity=0.273 Sum_probs=185.2
Q ss_pred eecCccchhhhhhhhhhcccCCcCcccCCCccccCCCCHHHHHHHhcCCCCCEEEecCCCcCcccCCCCHHHHHHHhCCc
Q 042108 146 RVRDFYSDYLFQSWLCANLEMKPEWLERDNIARKKCISVEEFVSSFEEPNKPVLLEGCLDNWAALKKWDRDYLVNVCGDV 225 (406)
Q Consensus 146 ~~~~~~sd~l~~~~~c~~~~~~~~~~~~~~I~r~~~ls~e~F~~~y~~~~~PvIi~~~~~~Wpa~~~Wt~~~L~~~~gd~ 225 (406)
+.+.=.|+.++..|+|+++.- ......+|+|++.+|++ | ++|+.+++||||+|+..+||| ++||++||++++|+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~I~Rv~~~s~~-~-~~y~~~~~PVVi~g~~~~wpA-~kWt~eyL~~~~G~~ 88 (349)
T 3d8c_A 14 GEPREEAGALGPAWDESQLRS--YSFPTRPIPRLSQSDPR-A-EELIENEEPVVLTDTNLVYPA-LKWDLEYLQENIGNG 88 (349)
T ss_dssp CSCCBCTTTCCBSCCGGGSCC--CSSCEEECCEECTTCHH-H-HHHHHTTCCEEESCCCTTGGG-GGCCHHHHHHHSCSS
T ss_pred CCccccccccccccCHHHHHh--cCCCCCCceEecCCChh-H-HHHhcCCccEEEeCCCCCccc-ccCCHHHHHHhhCCC
Confidence 334456888899999987542 22345789999999998 5 778999999999999999999 899999999999999
Q ss_pred eEEEc--------------------------ceecchHHHHHhhhcc---CCCCCeeecCcccccccCccccCCCCCCcC
Q 042108 226 RFAVG--------------------------PVEMKLEEYFRYSDSV---REERPLYLFDPKFADKVPTLGGEYEVPVYF 276 (406)
Q Consensus 226 ~v~v~--------------------------~~~~~l~~f~~~~~~~---~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f 276 (406)
+|.|+ .+.|+|++|++++.+. .++.++||++..+....|.|..||..+
T Consensus 89 ~V~V~~~~~~~~~y~d~~~~~~~~~F~~~~~~~~m~~~efl~~~~~~~~~~~~~~~YL~~~~~~~~~~~l~~D~~~~--- 165 (349)
T 3d8c_A 89 DFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGF--- 165 (349)
T ss_dssp CEEEEEESSSBCCCCCGGGTTSCTTCCCSEEEEEECHHHHHHHHHHHHHHTCCCEEEEEEECCTTSCHHHHHHHHTS---
T ss_pred eEEEEECCCCcccccccccccccccccccceeEeeEHHHHHHHHHhhcccCCCCCeeeecccccccchhhhhhhhcc---
Confidence 98873 1479999999998764 245689999764433334455554321
Q ss_pred hhhhhhhcC-C--CCCCc-ceeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCC--CcccCCC
Q 042108 277 REDLFSVLG-N--ERPDY-RWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDG--AEVACPV 350 (406)
Q Consensus 277 ~~d~~~~l~-~--~rp~~-~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~--~~v~sp~ 350 (406)
..++...+. . ..+.. .+||||++|++|++|+|+++ ||++||.|+|+|+||||.+.+ .+|+.... ....+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~iG~~gs~t~~H~D~~~--n~~~qv~G~K~~~L~pP~~~~-~ly~~~~~~~~~~~s~v 242 (349)
T 3d8c_A 166 NWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYGEQQ--NFFAQIKGYKRCILFPPDQFE-CLYPYPVHHPCDRQSQV 242 (349)
T ss_dssp CHHHHHHHHHHTTCCCEEECEEEEECTTCEEEEECCSEE--EEEEEEESCEEEEEECGGGHH-HHCBBCTTSTTBTBBCS
T ss_pred chhhhhhhhhccccCccccceEEEECCCCCccceECChh--cEEEEEeceEEEEEeCcchhh-hhccccccCCCCCcccc
Confidence 112221110 0 01222 46999999999999999996 999999999999999999875 67764321 1223455
Q ss_pred chhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecC-ccEEEeeecc
Q 042108 351 SIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLE-ESIAITQNYV 405 (406)
Q Consensus 351 ~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~-~sIavt~nFv 405 (406)
++.+.+++.||.++. +++++++|+|||+||||+||||+|.|++ ++++|++||.
T Consensus 243 d~~~~d~~~~p~~~~--~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 243 DFDNPDYERFPNFQN--VVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTSCCTTTCGGGGG--CCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred cCCCcchhhCccccc--CCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 555666788998875 3679999999999999999999999998 4666666653
No 5
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=100.00 E-value=3.1e-41 Score=341.91 Aligned_cols=220 Identities=19% Similarity=0.308 Sum_probs=167.7
Q ss_pred CCCccccC--CCCHHHHHHHhcCCCCCEEEecCCCcCcc---cCCCCHHHHHHHhCC-ceEEEc------ceecchHHHH
Q 042108 173 RDNIARKK--CISVEEFVSSFEEPNKPVLLEGCLDNWAA---LKKWDRDYLVNVCGD-VRFAVG------PVEMKLEEYF 240 (406)
Q Consensus 173 ~~~I~r~~--~ls~e~F~~~y~~~~~PvIi~~~~~~Wpa---~~~Wt~~~L~~~~gd-~~v~v~------~~~~~l~~f~ 240 (406)
.+.|+|++ ++|. +|.++ ..+++||||+|+ ++|+| .++||++||++++|+ ..|.|. .++|+|++|+
T Consensus 51 ~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~~Wpa~~P~~kWt~dyL~~~~G~d~~V~V~D~~~q~~~~M~l~eyi 127 (451)
T 2yu1_A 51 ANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-DGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWT 127 (451)
T ss_dssp CCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-TTTTCBCCCTTCCHHHHHHHTCTTCCCCCEETTSSCCTTCCHHHHH
T ss_pred CCceEecccccCCH-HHHHh-cCCCCcEEEccC-cCCCCcCCcCCCCHHHHHHHcCCCceEeeEEcCCCcceeeeHHHHH
Confidence 46789985 7999 99888 478999999999 99999 789999999999994 777763 4789999999
Q ss_pred HhhhccCCC-CCeee-----cCccccc---ccCccccCCC-CCCcChh-------hhhhhcCC-CCCCc-ceeEeccCCC
Q 042108 241 RYSDSVREE-RPLYL-----FDPKFAD---KVPTLGGEYE-VPVYFRE-------DLFSVLGN-ERPDY-RWVIIGPAGS 301 (406)
Q Consensus 241 ~~~~~~~~~-~~~Yl-----~d~~~~~---~~p~L~~d~~-~P~~f~~-------d~~~~l~~-~rp~~-~~l~iG~~gs 301 (406)
+|+++..++ .++|+ |+..+.+ ..|.+..++. +|.+|.+ |+|+.+++ .+|++ +|+|||++||
T Consensus 128 dy~~~~~d~r~~LY~v~sLeF~~~~l~~~~~~P~l~~d~Dwv~~~~p~~l~~~~~d~f~~lge~~rP~~~r~~~mGp~gS 207 (451)
T 2yu1_A 128 RYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGC 207 (451)
T ss_dssp HHHTSCTTTCCSCEEEEEECCTTSTTGGGCBCCHHHHHHCHHHHHSCGGGCC-----------CCSCCCCCEEEEECTTC
T ss_pred HHHhhccccccchhhhcccccccccccccccCchhhhhhhcccccCchhhhhhhhhhhhhcccccCCchheEEEEccCCC
Confidence 999988765 78998 7765442 3466655442 3333333 66777775 58887 9999999999
Q ss_pred CCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEE
Q 042108 302 GSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVI 381 (406)
Q Consensus 302 ~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~L 381 (406)
+|++|+|+++|++|++||.|+|+|+||||+..+..+|+.... ++..... +||... ..+++|+|+|||+|
T Consensus 208 ~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~----s~~q~~~----~~p~~~---~~~~~v~l~pGE~L 276 (451)
T 2yu1_A 208 YTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLL----SGSQGDI----FLGDRV---SDCQRIELKQGYTF 276 (451)
T ss_dssp EEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHH----TTCCSSS----CHHHHS---SCCEEEEECTTCEE
T ss_pred CCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccc----cccchhh----hhcccc---ccceEEEECCCcEE
Confidence 999999999999999999999999999999865334431100 0000011 345542 35699999999999
Q ss_pred EeCCCCeeeeeecCccEEEeeeccC
Q 042108 382 FVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 382 fIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
|||+||||+|.|+++|||||+||++
T Consensus 277 fIPsGWwH~V~nledsIait~NF~~ 301 (451)
T 2yu1_A 277 VIPSGWIHAVYTPTDTLVFGGNFLH 301 (451)
T ss_dssp EECTTCEEEEECSSCEEEEEEEECC
T ss_pred EeCCCceEEEecCCCeEEEeeeeCC
Confidence 9999999999999999999999985
No 6
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=100.00 E-value=1.2e-38 Score=314.33 Aligned_cols=217 Identities=24% Similarity=0.402 Sum_probs=174.9
Q ss_pred CCccccC--CCCHHHHHHHhcCCCCCEEEecCC---CcCcccCCCCHHHHHHHhC-CceEEEc------ceecchHHHHH
Q 042108 174 DNIARKK--CISVEEFVSSFEEPNKPVLLEGCL---DNWAALKKWDRDYLVNVCG-DVRFAVG------PVEMKLEEYFR 241 (406)
Q Consensus 174 ~~I~r~~--~ls~e~F~~~y~~~~~PvIi~~~~---~~Wpa~~~Wt~~~L~~~~g-d~~v~v~------~~~~~l~~f~~ 241 (406)
+-|.+++ +++.+.|.+... ++||||++.. ..||+. +||.+++++.+| +..|.|- ..+|+|++|++
T Consensus 17 ~~v~~i~~~d~t~~y~~~~~~--~~Pvli~~~~glg~~~P~~-~~tv~~v~~~vG~d~~V~ViDv~~Q~~~~M~l~~y~d 93 (371)
T 3k3o_A 17 EVILKPTGNQLTVEFLEENSF--SVPILVLKKDGLGMTLPSP-SFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVK 93 (371)
T ss_dssp TTSBCCCTTTCCHHHHHHHTT--CSCEEESSCTTSCCBCCCT-TCCHHHHHHHHCC-CEEEEEETTTTEEEEEEHHHHHH
T ss_pred HhcccCChhhCcHHHHHhcCC--CCCEEEecCcccCCcCCCC-CCCHHHHHHHcCCCceEeeeecCcCCCccccHHHHHH
Confidence 4566664 688888887654 6999999865 479986 899999999999 8888874 47899999999
Q ss_pred hhhccCCCCCeeecCcccccccCccccCCCCCCcChh-hhhhhc-----CCCCCC-cceeEeccCCCCCcceecCCCCcc
Q 042108 242 YSDSVREERPLYLFDPKFADKVPTLGGEYEVPVYFRE-DLFSVL-----GNERPD-YRWVIIGPAGSGSSFHMDPNSTSA 314 (406)
Q Consensus 242 ~~~~~~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~-d~~~~l-----~~~rp~-~~~l~iG~~gs~t~~H~D~~~t~~ 314 (406)
|+++..++.++|+++.+|.+. .|.++|.+|.+|.+ |+++.+ ...+|+ ++|+|||++||+|++|+|+++|++
T Consensus 94 Y~~~~~re~~lnv~d~efs~~--~L~~~~~~P~~~~d~d~~~~~wp~~~~~~rP~~~r~l~mGp~gS~T~~HiD~~gts~ 171 (371)
T 3k3o_A 94 YYYSGKREKVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSV 171 (371)
T ss_dssp HHTCTTCCSCEEEEEEECTTS--GGGGTCBCCHHHHHHCHHHHHSCSSCSSCCCCCSCEEEEECTTEEEEEECCGGGCEE
T ss_pred HHhccCCCCceeeechhccch--hhhccccCCchhhhhhhhhhcCChhhhccCCCceeEEEEcCCCCCCCeEECCCCCce
Confidence 999988889999999988764 68899999999986 666644 234787 599999999999999999999999
Q ss_pred eEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeec
Q 042108 315 WNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINL 394 (406)
Q Consensus 315 ~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl 394 (406)
|++||.|+|+|+|+||+..+..+|..-.. ++.. .++ +++.. ...+++|+|+|||+||||+||||+|.|+
T Consensus 172 w~~vv~GrK~w~L~PPt~~nl~~y~~~~~----s~~~-~e~---~~~~~---~~~~~ev~l~pGEtLfIPsGWwH~V~nl 240 (371)
T 3k3o_A 172 WYHVLKGEKIFYLIRPTNANLTLFECWSS----SSNQ-NEM---FFGDQ---VDKCYKCSVKQGQTLFIPTGWIHAVLTP 240 (371)
T ss_dssp EEEEEEEEEEEEEECCCHHHHHHHHHHHT----STTG-GGS---CGGGT---SSCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred eEEEeeeEEEEEEECCCcccccccccccc----CCcc-chh---hcccc---cCceEEEEECCCcEEEeCCCCeEEEecC
Confidence 99999999999999999865344542111 1110 111 22221 1467999999999999999999999999
Q ss_pred CccEEEeeeccC
Q 042108 395 EESIAITQNYVS 406 (406)
Q Consensus 395 ~~sIavt~nFv~ 406 (406)
++||||++||++
T Consensus 241 edSIai~~NFl~ 252 (371)
T 3k3o_A 241 VDCLAFGGNFLH 252 (371)
T ss_dssp EEEEEEEEEECC
T ss_pred CCeEEECCcccc
Confidence 999999999985
No 7
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=100.00 E-value=8.6e-39 Score=317.86 Aligned_cols=217 Identities=21% Similarity=0.348 Sum_probs=176.2
Q ss_pred CCccccC--CCCHHHHHHHhcCCCCCEEEecCC---CcCcccCCCCHHHHHHHhC-CceEEEc------ceecchHHHHH
Q 042108 174 DNIARKK--CISVEEFVSSFEEPNKPVLLEGCL---DNWAALKKWDRDYLVNVCG-DVRFAVG------PVEMKLEEYFR 241 (406)
Q Consensus 174 ~~I~r~~--~ls~e~F~~~y~~~~~PvIi~~~~---~~Wpa~~~Wt~~~L~~~~g-d~~v~v~------~~~~~l~~f~~ 241 (406)
+.|.+++ +++.+-|.+.. -++||||++.. ..||+ .+||.+++++.+| +..|.|- ..+|+|++|++
T Consensus 45 ~~v~~i~g~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~-~~~tv~~v~~~vG~d~~V~ViDv~~Q~~~~M~l~~yv~ 121 (397)
T 3kv9_A 45 EIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVK 121 (397)
T ss_dssp GTCEECCTTTCCHHHHHHHC--SCSCEEESSCTTSCCBCCC-TTCCHHHHHHHHTTTSEEEEEETTTTEEEEEEHHHHHH
T ss_pred HeeecCCHHHhhHHHHHhcC--CCCcEEEecCccccCcCCC-CCCCHHHHHHHhCCCceEeeeecCcccCccccHHHHHH
Confidence 3567774 68888777654 46999999965 47998 7999999999999 8889884 36899999999
Q ss_pred hhhccCCCCCeeecCcccccccCccccCCCCCCcChh-hhhhhcC-----CCCCC-cceeEeccCCCCCcceecCCCCcc
Q 042108 242 YSDSVREERPLYLFDPKFADKVPTLGGEYEVPVYFRE-DLFSVLG-----NERPD-YRWVIIGPAGSGSSFHMDPNSTSA 314 (406)
Q Consensus 242 ~~~~~~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~-d~~~~l~-----~~rp~-~~~l~iG~~gs~t~~H~D~~~t~~ 314 (406)
|+++..++.++|+++.+|.+. .|.+.|.+|.+|.+ |+++.+. ..+|. .+|+|||++||+|++|+|+++|++
T Consensus 122 Y~~~~~r~~~lnvislefs~~--~L~~~~~~P~~v~d~Dwv~~~wp~~~~~~rP~v~r~l~mGp~gS~T~~HiD~~gts~ 199 (397)
T 3kv9_A 122 YFMNPNRPKVLNVISLEFSDT--KMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSV 199 (397)
T ss_dssp HHHCSSCSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEECCGGGCEE
T ss_pred HHhccCCCccceecchhhccc--hhccCcCCCceeeccchhhhcCCchhccCCccceeEEEEcCCCCCCCEEECCCCCce
Confidence 999998889999999988754 58999999999985 7776542 23564 799999999999999999999999
Q ss_pred eEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeec
Q 042108 315 WNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINL 394 (406)
Q Consensus 315 ~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl 394 (406)
|++||+|+|+|+||||+..+..+|..-+.+ ....+ .+++... ..+++|+|+|||+||||+||||+|.|+
T Consensus 200 w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s-----~~~~e---~~~~~~~---~~~~~v~l~pGe~lfIPsGW~H~V~nl 268 (397)
T 3kv9_A 200 WYHVLWGEKIFYLIKPTDENLARYESWSSS-----VTQSE---VFFGDKV---DKCYKCVVKQGHTLFVPTGWIHAVLTS 268 (397)
T ss_dssp EEEEEEEEEEEEEECCCHHHHHHHHHHHTS-----GGGGG---SCGGGGS---SCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred eeeecCceEEEEEeCCcccccccccccccC-----CCcch---hhhcccc---CceEEEEECCCCEEEeCCCCeEEccCC
Confidence 999999999999999998764566421111 11111 1233221 367999999999999999999999999
Q ss_pred CccEEEeeeccC
Q 042108 395 EESIAITQNYVS 406 (406)
Q Consensus 395 ~~sIavt~nFv~ 406 (406)
++||||++||++
T Consensus 269 edSIai~~NFl~ 280 (397)
T 3kv9_A 269 QDCMAFGGNFLH 280 (397)
T ss_dssp EEEEEEEEEECC
T ss_pred cCeEEECCcccC
Confidence 999999999985
No 8
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=100.00 E-value=3.8e-38 Score=312.34 Aligned_cols=216 Identities=20% Similarity=0.339 Sum_probs=169.7
Q ss_pred CccccC--CCCHHHHHHHhcCCCCCEEEecCC---CcCcccCCCCHHHHHHHhC-CceEEEc------ceecchHHHHHh
Q 042108 175 NIARKK--CISVEEFVSSFEEPNKPVLLEGCL---DNWAALKKWDRDYLVNVCG-DVRFAVG------PVEMKLEEYFRY 242 (406)
Q Consensus 175 ~I~r~~--~ls~e~F~~~y~~~~~PvIi~~~~---~~Wpa~~~Wt~~~L~~~~g-d~~v~v~------~~~~~l~~f~~~ 242 (406)
-|.+++ +++.+-|.+... ++|+||++.. ..||+ .+||++++++.+| |..|.|- ..+|+|++|++|
T Consensus 45 ~v~~~~g~~f~~~yl~~~g~--~~Pvli~~~~glgm~~P~-~~~tv~~v~~~vG~d~~V~ViDv~~Q~~~~M~l~~yv~Y 121 (392)
T 3pua_A 45 VVARVPGSQLTLGYMEEHGF--TEPILVPKKDGLGLAVPA-PTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY 121 (392)
T ss_dssp TSEECCGGGCCHHHHHHHTT--CSCEEESSCTTTTCBCCC-TTCCHHHHHHHHCTTCEEEEEETTTTEEEEEEHHHHHHH
T ss_pred eEecCChhhchHHHHHhcCC--CccEEEeCCccccCcCCC-CCCCHHHHHHHcCCCcEEeeeecCcCcCccccHHHHHHH
Confidence 345553 577776665543 6999999865 58998 6899999999999 8889873 478999999999
Q ss_pred hhccCCCCCeeecCcccccccCccccCCCCCCcChh-hhhhhc-----CCCCCC-cceeEeccCCCCCcceecCCCCcce
Q 042108 243 SDSVREERPLYLFDPKFADKVPTLGGEYEVPVYFRE-DLFSVL-----GNERPD-YRWVIIGPAGSGSSFHMDPNSTSAW 315 (406)
Q Consensus 243 ~~~~~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~-d~~~~l-----~~~rp~-~~~l~iG~~gs~t~~H~D~~~t~~~ 315 (406)
++++.++.++|+++.+|.+. .|.+.+.+|.++.+ |+.+.+ ...+|+ ++|++||++||+|++|+|+++|++|
T Consensus 122 ~~~~~re~~lnv~dlefs~t--~L~~~~~~P~lv~d~d~v~~~wp~~~~~~rP~v~r~~~mGp~gS~T~fHiD~~gTs~w 199 (392)
T 3pua_A 122 YYSTNRKRVLNVTNLEFSDT--RMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAW 199 (392)
T ss_dssp HTCSSCCSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHSCTTCSSCCCSCSCEEEEECTTCEEEEECCGGGCEEE
T ss_pred HhccCCCcceEeeecccccc--hhhccccCchhhhhhhhhhhccchhhhhcCCCceeEEEEeCCCCCCCEeECCCCCcee
Confidence 99999999999999988754 57888888987764 444322 124777 9999999999999999999999999
Q ss_pred EEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecC
Q 042108 316 NAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 316 ~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
+++|+|+|+|+||||+..+..+|..-.. ++.....| ++.. ...+++|+|+|||+||||+||||+|.|++
T Consensus 200 ~~vi~GrK~w~L~PPt~~nl~~y~~~~~----s~~~~e~~----~~~~---~~~~~ev~l~pGEtlfIPsGWwH~V~nle 268 (392)
T 3pua_A 200 YHVLKGEKTFYLIRPASANISLYERWRS----ASNHSEMF----FADQ---VDKCYKCIVKQGQTLFIPSGWIYATLTPV 268 (392)
T ss_dssp EEEEEEEEEEEEECCCHHHHHHHHHHHH----STTGGGSC----GGGG---SSCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred eeeccceEEEEEECCCcccccchhhccc----Ccchhhhh----hccc---ccceEEEEECCCcEEeeCCCceEEEecCC
Confidence 9999999999999998764333331110 11111112 2221 13569999999999999999999999999
Q ss_pred ccEEEeeeccC
Q 042108 396 ESIAITQNYVS 406 (406)
Q Consensus 396 ~sIavt~nFv~ 406 (406)
+||||++||++
T Consensus 269 dSIai~gNFl~ 279 (392)
T 3pua_A 269 DCLAFAGHFLH 279 (392)
T ss_dssp EEEEEEEEECC
T ss_pred CEEEEcCcccC
Confidence 99999999985
No 9
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=316.33 Aligned_cols=211 Identities=24% Similarity=0.406 Sum_probs=170.0
Q ss_pred CCCCHHHHHHHhcCCCCCEEEecCC---CcCcccCCCCHHHHHHHhC-CceEEEc------ceecchHHHHHhhhccCCC
Q 042108 180 KCISVEEFVSSFEEPNKPVLLEGCL---DNWAALKKWDRDYLVNVCG-DVRFAVG------PVEMKLEEYFRYSDSVREE 249 (406)
Q Consensus 180 ~~ls~e~F~~~y~~~~~PvIi~~~~---~~Wpa~~~Wt~~~L~~~~g-d~~v~v~------~~~~~l~~f~~~~~~~~~~ 249 (406)
++++.+-|.+... ++||||++.. ..||+. +||.+++++.+| +..|.|- ..+|+|++|++|+++..++
T Consensus 109 ~~~~~~~~~~~~~--~~Pvli~~~~glgm~~P~~-~~tv~~v~~~~G~d~~V~ViDv~~Q~~~~M~l~~y~dy~~~~~r~ 185 (447)
T 3kv4_A 109 NQLTVEFLEENSF--SVPILVLKKDGLGMTLPSP-SFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYYSGKRE 185 (447)
T ss_dssp TTCCHHHHHHTTS--CSCEEESSCTTSCCBCCCT-TCCHHHHHHHHCTTCEEEEEETTTTEEEEEEHHHHHHHHHSSCCS
T ss_pred hhchHHHHHhcCC--CCCEEEecCcccCCcCCCc-cCCHHHHHHHcCCCceEcceecCcCccccccHHHHHHHHhccCCC
Confidence 3566666665543 6999999764 579976 899999999999 8888874 4789999999999998888
Q ss_pred CCeeecCcccccccCccccCCCCCCcChh-hhhhhc-----CCCCCC-cceeEeccCCCCCcceecCCCCcceEEEEEeE
Q 042108 250 RPLYLFDPKFADKVPTLGGEYEVPVYFRE-DLFSVL-----GNERPD-YRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGS 322 (406)
Q Consensus 250 ~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~-d~~~~l-----~~~rp~-~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~ 322 (406)
.++|+++.+|.+. .|.++|.+|.+|.+ |+++.+ ...+|+ ++|+|||++||+|++|+|+++|++|+++|.|+
T Consensus 186 ~~lnv~d~efs~~--~L~~~~~~P~~~~~~D~~~~lw~~~~~~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~Gr 263 (447)
T 3kv4_A 186 KVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGE 263 (447)
T ss_dssp SCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCSCTTSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEESE
T ss_pred Cceeecccccccc--hhhhccCCCceecccchhhhcccchhhccCCCceeEEEEeCCCCCCCeeECCCCCceeEEEeeeE
Confidence 9999999988764 68999999999985 777755 235786 99999999999999999999999999999999
Q ss_pred EEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEee
Q 042108 323 KKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 323 K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
|+|+||||+..+...|..-.. ++.. .++ +++.. ...+++++|+|||+||||+||||+|.|+++||||++
T Consensus 264 K~w~L~PPt~~nl~~~~~~~~----s~~~-~~~---~~~~~---~~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~ 332 (447)
T 3kv4_A 264 KIFYLIRPTNANLTLFECWSS----SSNQ-NEM---FFGDQ---VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGG 332 (447)
T ss_dssp EEEEEECCCHHHHHHHHHHHT----CSSG-GGS---CGGGG---SSCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEE
T ss_pred EEEEEeCCCcccccchhhccc----Ccch-hhh---hcccc---ccceEEEEECCCcEEecCCCCeEEEecCCCEEEEcc
Confidence 999999999754223321111 1111 111 12221 146799999999999999999999999999999999
Q ss_pred eccC
Q 042108 403 NYVS 406 (406)
Q Consensus 403 nFv~ 406 (406)
||++
T Consensus 333 NF~~ 336 (447)
T 3kv4_A 333 NFLH 336 (447)
T ss_dssp EECC
T ss_pred cccc
Confidence 9985
No 10
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=100.00 E-value=2.4e-37 Score=317.45 Aligned_cols=216 Identities=19% Similarity=0.311 Sum_probs=172.9
Q ss_pred Ccccc--CCCCHHHHHHHhcCCCCCEEEecCC---CcCcccCCCCHHHHHHHhC-CceEEEc------ceecchHHHHHh
Q 042108 175 NIARK--KCISVEEFVSSFEEPNKPVLLEGCL---DNWAALKKWDRDYLVNVCG-DVRFAVG------PVEMKLEEYFRY 242 (406)
Q Consensus 175 ~I~r~--~~ls~e~F~~~y~~~~~PvIi~~~~---~~Wpa~~~Wt~~~L~~~~g-d~~v~v~------~~~~~l~~f~~~ 242 (406)
-|.++ ++++.+.|.+.. -++||||++.. ..||+ .+||++++++.+| +..|.|- ..+|+|++|++|
T Consensus 137 ~v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~~P~-~~~t~~~v~~~~G~d~~V~V~Dv~~Q~~~~m~l~~yi~y 213 (488)
T 3kv5_D 137 IIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVKY 213 (488)
T ss_dssp TCEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCCBCCC-TTCCHHHHHHHHCTTCEEEEEETTTTEEEEEEHHHHHHH
T ss_pred eeeccccccchHHHHHhcC--CCCCEEEecCCCcCCcCCC-CCCcHHHHHHHhCCCceeeeeecCccccccccHHHHHHH
Confidence 45555 368888777654 36999999965 47998 7999999999999 8888874 368999999999
Q ss_pred hhccCCCCCeeecCcccccccCccccCCCCCCcChh-hhhhhcC-----CCCCC-cceeEeccCCCCCcceecCCCCcce
Q 042108 243 SDSVREERPLYLFDPKFADKVPTLGGEYEVPVYFRE-DLFSVLG-----NERPD-YRWVIIGPAGSGSSFHMDPNSTSAW 315 (406)
Q Consensus 243 ~~~~~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~-d~~~~l~-----~~rp~-~~~l~iG~~gs~t~~H~D~~~t~~~ 315 (406)
+++..++.++|+++.+|.+. .|.++|.+|.++.+ |+++.+. ..+|. .+|+|||++||+|++|+|+++|++|
T Consensus 214 ~~~~~r~~~~nv~slefs~~--~L~~~~~~P~~~~~~d~~~~~wp~~~~~~rP~~~r~~~mG~~gS~T~~H~D~~~t~~w 291 (488)
T 3kv5_D 214 FMNPNRPKVLNVISLEFSDT--KMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVW 291 (488)
T ss_dssp HHSSSCSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEECCGGGCEEE
T ss_pred HhccCCcccccccccccccc--hhhccCCCChhhhhhchhhhcCcccccccCcccceEEEEcCCCCCCCeEECCCCCcee
Confidence 99988888999999887653 68999999999864 7776542 23555 6999999999999999999999999
Q ss_pred EEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecC
Q 042108 316 NAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 316 ~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
++||.|+|+|+||||+..+..+|..-+.+. + . .+.++... ...+++++|+|||+||||+||||+|.|++
T Consensus 292 ~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~---~--~----~~~~~~~~--~~~~~~~~l~pGe~lfIPsGWwH~V~nle 360 (488)
T 3kv5_D 292 YHVLWGEKIFYLIKPTDENLARYESWSSSV---T--Q----SEVFFGDK--VDKCYKCVVKQGHTLFVPTGWIHAVLTSQ 360 (488)
T ss_dssp EEEEEEEEEEEEECCCHHHHHHHHHHHTCS---S--G----GGSCGGGS--SSCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred eeccCeeEEEEEeCCcccccccccccccCC---c--c----chhhhccc--ccceEEEeeCCCCEEEeCCCceEEeeCCC
Confidence 999999999999999876545554211110 0 0 11112111 24679999999999999999999999999
Q ss_pred ccEEEeeeccC
Q 042108 396 ESIAITQNYVS 406 (406)
Q Consensus 396 ~sIavt~nFv~ 406 (406)
+|||||+||++
T Consensus 361 dsIai~~NF~~ 371 (488)
T 3kv5_D 361 DCMAFGGNFLH 371 (488)
T ss_dssp EEEEEEEEECC
T ss_pred CeEEEccccCC
Confidence 99999999985
No 11
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.95 E-value=4e-28 Score=246.70 Aligned_cols=212 Identities=20% Similarity=0.352 Sum_probs=160.4
Q ss_pred CCHHHHHHHhcCC------CCCEEEecCC---CcCcccCCCCHHHHHHHhC-CceEEEc------ceecchHHHHHhhhc
Q 042108 182 ISVEEFVSSFEEP------NKPVLLEGCL---DNWAALKKWDRDYLVNVCG-DVRFAVG------PVEMKLEEYFRYSDS 245 (406)
Q Consensus 182 ls~e~F~~~y~~~------~~PvIi~~~~---~~Wpa~~~Wt~~~L~~~~g-d~~v~v~------~~~~~l~~f~~~~~~ 245 (406)
.+-.+|..+|... .+|+++++.. -.-|. ...|.+.+.+..| +..|.|- ...|+|++|++|..+
T Consensus 151 ~dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~~P~-~~ftv~dV~~~vG~d~~VdVIDV~tQ~~~~mtl~~~~~yf~~ 229 (528)
T 3pur_A 151 EDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPK-PGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRD 229 (528)
T ss_dssp EEHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCCCCC-TTCCHHHHHHHHCTTCEEEEEETTTTEEEEEEHHHHHHHHHC
T ss_pred cCchhhHHHHHhhcCcccCCeeEEEeccccCCCCCCC-CCCCHHHHHHhhCCCceEeeEECCCCCCCcCcHHHHHHHhcC
Confidence 3556677666543 3799999743 12342 2688999999987 7777763 368999999999987
Q ss_pred c-CCCCCeeecCcccccccCccccCCCCCCcChh-hhhhhcCC--------------------CCCCc-ceeEeccCCCC
Q 042108 246 V-REERPLYLFDPKFADKVPTLGGEYEVPVYFRE-DLFSVLGN--------------------ERPDY-RWVIIGPAGSG 302 (406)
Q Consensus 246 ~-~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~-d~~~~l~~--------------------~rp~~-~~l~iG~~gs~ 302 (406)
. ..+..+++.+.+|. +.+.|.+.+.+|.++.+ |+.+.+.. .+|.+ +|++||++||+
T Consensus 230 ~~~R~~i~NviSLEfS-~~~~L~~~v~~P~~Vr~ld~v~~~Wp~~~~~~~~~~~~~~~~~~~~~rP~v~rf~lmg~~gS~ 308 (528)
T 3pur_A 230 TKNRPLLYNFLSLEFS-DNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSY 308 (528)
T ss_dssp CSCCSSCEEECCEECT-TSTTHHHHSCCCHHHHHHCHHHHHSCCC-------------CCCGGGSCCCSSEEEEECTTEE
T ss_pred ccccceeeEEeeEEec-CchhhhccccCCcEEecccHHHHhcCcccchhhhhhhhcccccccccCCCeeEEEEEeCCCCC
Confidence 4 24456888888865 45778888999998876 66665531 35664 99999999999
Q ss_pred CcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEE
Q 042108 303 SSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIF 382 (406)
Q Consensus 303 t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~Lf 382 (406)
|.+|+|++.|++|+++++|+|+|+||||+..+..+|..- ..++. ...|+.+.+. .+.++++|+|||+||
T Consensus 309 Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w----~~s~~-~~~wfgd~l~------~~~~~v~l~pGEtlf 377 (528)
T 3pur_A 309 TDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAH----ETSPD-TTTWFGDIAN------GAVKRVVIKEGQTLL 377 (528)
T ss_dssp EEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH----HHSSC-CSCCGGGGTT------TCCEEEEEETTCEEE
T ss_pred CCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhh----ccCCc-hhhhhccccc------ccEEEEEECCCCEEE
Confidence 999999999999999999999999999986543333211 01222 1245443322 345899999999999
Q ss_pred eCCCCeeeeeecCccEEEeeeccC
Q 042108 383 VPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 383 IP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
||+||||+|.|+++||||++||++
T Consensus 378 IPsGW~HaV~tleDSIaiggNFl~ 401 (528)
T 3pur_A 378 IPAGWIHAVLTPVDSLVFGGNFLH 401 (528)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEECC
T ss_pred ecCCceEEEecCCCeEEEcCcccc
Confidence 999999999999999999999985
No 12
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.94 E-value=5.9e-27 Score=231.75 Aligned_cols=204 Identities=17% Similarity=0.166 Sum_probs=137.3
Q ss_pred cccCCCCHHHHHHHhcCCCCCEEEecCCCcC-cccCCCCHHHHHHHhCC-----ceEEEc-c-----------e-ecchH
Q 042108 177 ARKKCISVEEFVSSFEEPNKPVLLEGCLDNW-AALKKWDRDYLVNVCGD-----VRFAVG-P-----------V-EMKLE 237 (406)
Q Consensus 177 ~r~~~ls~e~F~~~y~~~~~PvIi~~~~~~W-pa~~~Wt~~~L~~~~gd-----~~v~v~-~-----------~-~~~l~ 237 (406)
+++..+|.++|.++|+ .++||||+++ .+| + ..|+.++|.+.+++ ..|++. . . .++.+
T Consensus 23 ~ll~~is~e~F~~~yw-~kkPlvir~~-~~~~~--~l~s~~~L~~l~~~~~v~~~~vrl~~~~~~~~~~~~~~g~~~~~~ 98 (342)
T 1vrb_A 23 SIISPVTMSEFLEEYW-PVKPLVARGE-VERFT--SIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPA 98 (342)
T ss_dssp HHHTTSCHHHHHHHTT-TTSCEEECCC-GGGGG--GSTTCGGGSSHHHHHHHCCSCEEEC-------------CEEECHH
T ss_pred HHHcCCCHHHHHHHHh-ccCCEEEcCC-ccccc--CCCCHHHHHHHHhhcCcCcCceEEeCCCcCccccccCCCcccCHH
Confidence 4567899999999999 6899999998 665 4 36776666554432 223321 1 1 34566
Q ss_pred HHHHhhhccCCCCCeeecCcccccccCccccCCCCCCcChhhhhhhcCCCCCCcce----eEeccCCCCCcceecCCCCc
Q 042108 238 EYFRYSDSVREERPLYLFDPKFADKVPTLGGEYEVPVYFREDLFSVLGNERPDYRW----VIIGPAGSGSSFHMDPNSTS 313 (406)
Q Consensus 238 ~f~~~~~~~~~~~~~Yl~d~~~~~~~p~L~~d~~~P~~f~~d~~~~l~~~rp~~~~----l~iG~~gs~t~~H~D~~~t~ 313 (406)
+|.+...+ +..+++.+- ....|++.+. .+++....+ . +...+ +|+|++|+++++|+|+++
T Consensus 99 ~~~~l~~~---g~tl~v~~~--~~~~p~l~~l-------~~~~~~~~~-~-~~~~n~~~~~~~gp~g~~~~~H~D~~d-- 162 (342)
T 1vrb_A 99 EALEWYEK---GAALEFDFT--DLFIPQVRRW-------IEKLKAELR-L-PAGTSSKAIVYAAKNGGGFKAHFDAYT-- 162 (342)
T ss_dssp HHHHHHHT---TCCEEECCG--GGTCTHHHHH-------HHHHHHHTT-C-CTTCCEEEEEEEECSSCCCCSEECSSE--
T ss_pred HHHHHHhC---CCeEEECCh--hHhChHHHHH-------HHhhhhhcC-C-cccccccceEEEeCCCCCCCCeECChh--
Confidence 66555443 234555442 1223332211 111111111 1 12223 899999999999999998
Q ss_pred ceEEEEEeEEEEEEe-CCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeee
Q 042108 314 AWNAIIKGSKKWILF-PPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVI 392 (406)
Q Consensus 314 ~~~~qi~G~K~w~L~-pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~ 392 (406)
|+++||.|+|+|+|| ||....+ +|+....+...+|+++..++.+.||.++. ...++++|+|||+||||+||||+|.
T Consensus 163 nfl~Qv~G~Krw~L~~~P~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~L~pGD~LyiP~gwwH~v~ 239 (342)
T 1vrb_A 163 NLIFQIQGEKTWKLAKNENVSNP-MQHYDLSEAPYYPDDLQSYWKGDPPKEDL--PDAEIVNLTPGTMLYLPRGLWHSTK 239 (342)
T ss_dssp EEEEEEESCEEEEEECCSSCSSC-SSCEECC----CCHHHHHHCCSCCCCTTC--CSSEEEEECTTCEEEECTTCEEEEE
T ss_pred cEEEEEEEEEEEEEecCCccccc-cCcccccccccccccccccchhhcccccc--CCceEEEECCCcEEEeCCCccEEEE
Confidence 999999999999999 8886653 66533333345788877777777887764 5679999999999999999999999
Q ss_pred ec--CccEEEeee
Q 042108 393 NL--EESIAITQN 403 (406)
Q Consensus 393 nl--~~sIavt~n 403 (406)
++ +.|++||.+
T Consensus 240 s~~~~~slsvsi~ 252 (342)
T 1vrb_A 240 SDQATLALNITFG 252 (342)
T ss_dssp CSSCEEEEEEEEC
T ss_pred ECCCCceEEEEEC
Confidence 99 368888875
No 13
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=192.03 Aligned_cols=196 Identities=21% Similarity=0.235 Sum_probs=110.6
Q ss_pred cCCCCHHHHHHHhcCCCCCEEEecCCCc-CcccC-CCCHHHHHHHhCCceEEEcceecchHHHHHhhhcc-CCCCCe---
Q 042108 179 KKCISVEEFVSSFEEPNKPVLLEGCLDN-WAALK-KWDRDYLVNVCGDVRFAVGPVEMKLEEYFRYSDSV-REERPL--- 252 (406)
Q Consensus 179 ~~~ls~e~F~~~y~~~~~PvIi~~~~~~-Wpa~~-~Wt~~~L~~~~gd~~v~v~~~~~~l~~f~~~~~~~-~~~~~~--- 252 (406)
+..+|.++|.++|+. ++|++|++...+ |+++. .|+.++|.+..+...+. +..+.+..|.+--... ....+.
T Consensus 23 l~~is~e~F~~~yw~-kkPllIr~~~~~~~~~f~~l~s~~~L~~La~~~~v~--~~~v~~~r~~~g~~~~~~~~g~~~~~ 99 (442)
T 2xdv_A 23 ISPIKTETFFKEFWE-QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYY--GRDVNVCRCVNGKKKVLNKDGKAHFL 99 (442)
T ss_dssp TTTSCHHHHHHHTTT-TSCEEECCCCHHHHHHHHHHCCHHHHSSCC----------------------------------
T ss_pred hcCCCHHHHHHHhhh-hCcEEeecCCcchhhhhcCcCCHHHHHHHHccCccc--ccccceeeecCCcceeecCCCccCHH
Confidence 467999999999996 799999998765 88874 68999998876643221 1122222222110000 000011
Q ss_pred eecCcccccccCcc--ccCC-CCCCc--ChhhhhhhcCCCCCCcceeEeccCCCCC-cceecCCCCcceEEEEEeEEEEE
Q 042108 253 YLFDPKFADKVPTL--GGEY-EVPVY--FREDLFSVLGNERPDYRWVIIGPAGSGS-SFHMDPNSTSAWNAIIKGSKKWI 326 (406)
Q Consensus 253 Yl~d~~~~~~~p~L--~~d~-~~P~~--f~~d~~~~l~~~rp~~~~l~iG~~gs~t-~~H~D~~~t~~~~~qi~G~K~w~ 326 (406)
++.+ .+.+.--.| .+-. ..|.. +.+.+.+.+| .+...++|+|++|+.+ ++|+|.++ |+++|+.|+|+|+
T Consensus 100 ~l~~-~~~~~g~tL~l~~~~~~~p~L~~l~~~l~~~~g--~~~~~n~y~~~~g~~g~~~H~D~~d--vf~~Qv~G~Krw~ 174 (442)
T 2xdv_A 100 QLRK-DFDQKRATIQFHQPQRFKDELWRIQEKLECYFG--SLVGSNVYITPAGSQGLPPHYDDVE--VFILQLEGEKHWR 174 (442)
T ss_dssp ---C-CEEEETTEEEEECGGGTCHHHHHHHHHHHHHHT--SCCEEEEEEECTTCBCSCSEECSSE--EEEEEEESCEEEE
T ss_pred HHHH-HhccCCcEEEeCchhhhhhHHHHHHHHHHHHhC--CCcccceEECCCCCCCccceECCcc--eEEEEEEeEEEEE
Confidence 0000 000000000 0000 01111 1111222344 3556789999999866 89999998 9999999999999
Q ss_pred EeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecC-c--cEEEee
Q 042108 327 LFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLE-E--SIAITQ 402 (406)
Q Consensus 327 L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~-~--sIavt~ 402 (406)
|++|... ++. ... ++. .+ .+ ....++++|+|||+||||+||||+|.+++ . |+.+|.
T Consensus 175 l~~p~~p----l~~--~~s----~d~----~~---~~---~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~ 233 (442)
T 2xdv_A 175 LYHPTVP----LAR--EYS----VEA----EE---RI---GRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTI 233 (442)
T ss_dssp EECCSST----TCS--SCE----ECC----TT---TS---CSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEE
T ss_pred EccCCCC----ccc--cCC----CCc----hh---hc---CCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccc
Confidence 9999862 111 111 111 01 11 13458999999999999999999999986 2 555443
No 14
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=99.78 E-value=1.8e-18 Score=175.67 Aligned_cols=98 Identities=16% Similarity=0.284 Sum_probs=74.2
Q ss_pred CCcceeEeccCCCC-CcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCC
Q 042108 289 PDYRWVIIGPAGSG-SSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWK 367 (406)
Q Consensus 289 p~~~~l~iG~~gs~-t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~ 367 (406)
+...++|++++|+. .++|+|.++ ++++||.|+|+|+|++|.+.. ..+|.....++.. +. ..
T Consensus 163 ~v~~N~Y~tp~Gs~g~~pH~D~~D--vFllQv~G~KrWrL~~P~~~~-~~lp~~~~~~~~~------------~~---~~ 224 (489)
T 4diq_A 163 MAGSNVYLTPPNSQGFAPHYDDIE--AFVLQLEGRKLWRVYRPRAPT-EELALTSSPNFSQ------------DD---LG 224 (489)
T ss_dssp CEEEEEEEECSSBCCSCCBCCSSE--EEEEEEEECEEEEEECCSSGG-GTTCSSCCCCCCG------------GG---CC
T ss_pred cccceEEecCCCcccccCccCCcc--eEEEEEeeEEEEEEeCCCCcc-ccCCCcccccCCc------------cc---cc
Confidence 45678999999985 599999998 999999999999999998754 2344322211110 01 12
Q ss_pred CCcEEEEEcCCCEEEeCCCCeeeeeecCc--cEEEeeec
Q 042108 368 KRPIECICKAGEVIFVPNGWWHLVINLEE--SIAITQNY 404 (406)
Q Consensus 368 ~~~~~~vl~pGD~LfIP~gWwH~V~nl~~--sIavt~nF 404 (406)
...++++|+|||+||||.||||+|.++++ |+.+|..+
T Consensus 225 ~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~ 263 (489)
T 4diq_A 225 EPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLST 263 (489)
T ss_dssp CCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEE
T ss_pred CcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecc
Confidence 35689999999999999999999999975 66666543
No 15
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.68 E-value=2.3e-17 Score=161.24 Aligned_cols=220 Identities=20% Similarity=0.299 Sum_probs=131.7
Q ss_pred CHHHHHHHhcCCCCCEEEecCCCcCcccCCCCHHHHHHHhCCceEEEc------ceecchHHHHHhhhcc--------CC
Q 042108 183 SVEEFVSSFEEPNKPVLLEGCLDNWAALKKWDRDYLVNVCGDVRFAVG------PVEMKLEEYFRYSDSV--------RE 248 (406)
Q Consensus 183 s~e~F~~~y~~~~~PvIi~~~~~~Wpa~~~Wt~~~L~~~~gd~~v~v~------~~~~~l~~f~~~~~~~--------~~ 248 (406)
+...|.+.| .+++||||+|+.+... ...|++++|.+.+|+..+.+- .+.+++++|++-.... ..
T Consensus 23 n~~~Fq~hW-~~GePViVs~V~~~~~-~~~W~Pe~~~~~~gd~~~~lidC~~~~~~~i~v~~Ff~Gf~~~~~r~~~~~g~ 100 (392)
T 2ypd_A 23 NWKLFKECW-KQGQPAVVSGVHKKMN-ISLWKAESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGE 100 (392)
T ss_dssp HHHHHHHHH-TTTCCEEECCHHHHSC-GGGGSHHHHHHHHTTSCCCCEETTTCCBCSCCHHHHHHTSSBGGGC------C
T ss_pred cHHHHHHHH-hCCCcEEEechhhhCc-CCccCHHHHHHHhcCceeeeeeCCCCccccCcHHHHhhhccccccCCcCCCCC
Confidence 356888776 5799999999876443 247999999999998876432 2578899999843321 11
Q ss_pred CCCeeecCccc----ccccCc----cccCCCCCCcChhh-hhh---hcCCC--CCC-cceeEe--cc------CCCCCcc
Q 042108 249 ERPLYLFDPKF----ADKVPT----LGGEYEVPVYFRED-LFS---VLGNE--RPD-YRWVII--GP------AGSGSSF 305 (406)
Q Consensus 249 ~~~~Yl~d~~~----~~~~p~----L~~d~~~P~~f~~d-~~~---~l~~~--rp~-~~~l~i--G~------~gs~t~~ 305 (406)
..-+-|.||.- .+.+|. +...+.+|+|...+ .++ .|+.. +|+ ..-++| |. ..+.|.+
T Consensus 101 p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~~~~~~~gvT~L 180 (392)
T 2ypd_A 101 TVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNL 180 (392)
T ss_dssp CCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTTCTTCCTTTSCGGGCC---CCEEEEECCSTTTTCTTCCSEEE
T ss_pred cceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCCccchHHHhCCCCCCCCCCCcchhhhcCcchhcccCCCccee
Confidence 23456777752 233443 33334444443322 222 22221 332 112333 32 2357889
Q ss_pred eecCCCCcceEEEEEeE--------------------------------------EEEEEeCCCCCCC---CcccC--CC
Q 042108 306 HMDPNSTSAWNAIIKGS--------------------------------------KKWILFPPDVVPP---GVHPS--SD 342 (406)
Q Consensus 306 H~D~~~t~~~~~qi~G~--------------------------------------K~w~L~pP~~~~~---~l~p~--~d 342 (406)
|.|..+ +.|+++.-. -.|-+|.+.+.+. .+.-. +-
T Consensus 181 H~DmsD--aVNiL~h~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~r~~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~ 258 (392)
T 2ypd_A 181 HIEVSD--VVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKEQ 258 (392)
T ss_dssp EECSSE--EEEEEEEEECCBCTTCCCHHHHHHHHHTSCCCHHHHHHHTCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred eeehhh--hhhhhheecccCccccchhhhhhhhhhhccccHHHhhhccCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhh
Confidence 999998 777776532 3466666666431 00000 00
Q ss_pred C---CcccCCCchhhhhhhhhhh---hhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeeccC
Q 042108 343 G---AEVACPVSIMEWFMNFYGA---TKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 343 ~---~~v~sp~~~~~w~~~~~p~---~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
+ ..+..|+--..++++..-+ ..+.+..++++++++||++|||+||+|||.|+.+||+|++||||
T Consensus 259 ~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~s 328 (392)
T 2ypd_A 259 GLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVS 328 (392)
T ss_dssp C------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECC
T ss_pred CCCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcC
Confidence 1 1122333223344432111 12235688999999999999999999999999999999999997
No 16
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=99.06 E-value=5.4e-10 Score=108.41 Aligned_cols=206 Identities=17% Similarity=0.275 Sum_probs=129.7
Q ss_pred hcCCCCC-EEEecCCC--cCcccCCCCHHHHHHHhCCceEEEcc-------------------------eecchHHHHHh
Q 042108 191 FEEPNKP-VLLEGCLD--NWAALKKWDRDYLVNVCGDVRFAVGP-------------------------VEMKLEEYFRY 242 (406)
Q Consensus 191 y~~~~~P-vIi~~~~~--~Wpa~~~Wt~~~L~~~~gd~~v~v~~-------------------------~~~~l~~f~~~ 242 (406)
...++.| +||+|+++ .+. ...++.+.|.+..|+..|.|.. ..+|+++|.+|
T Consensus 32 ~~~~~~pi~vIrgl~~~l~ld-~~lFs~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~~~~~~~ti~kya~y 110 (332)
T 2xxz_A 32 CTDPRNPITVIRGLAGSLRLN-LGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQY 110 (332)
T ss_dssp HHCTTCSEEEEESHHHHHTCC-GGGGSHHHHHHHHTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCCEEEEEEHHHHHHH
T ss_pred hcCCCCCeEEEcchhhhhCcC-hhhCCHHHHHHhCCCCeeeeeecCCCCCcccccCCCCccccccccccccccHHHHHHH
Confidence 3456899 89999864 232 2467899999999998887631 35789999888
Q ss_pred hhcc-----CCCC-----C--------ee--------------ecC--ccc------ccccCccccCCCCCCcCh----h
Q 042108 243 SDSV-----REER-----P--------LY--------------LFD--PKF------ADKVPTLGGEYEVPVYFR----E 278 (406)
Q Consensus 243 ~~~~-----~~~~-----~--------~Y--------------l~d--~~~------~~~~p~L~~d~~~P~~f~----~ 278 (406)
..+. .++. + .+ .|. -++ .+++.+| =.+|.+++ .
T Consensus 111 q~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fgtNiDL~~~~~w~~q~~el---~kLP~~lr~~~~g 187 (332)
T 2xxz_A 111 QASSFQESLQEEKESEDEESEEPDSTTGTPPSSAPDPKNHHIIKFGTNIDLSDAKRWKPQLQEL---LKLPAFMRVTSTG 187 (332)
T ss_dssp HHHHHHTTCSCC---------------------------CCEEEEEEEEECCCHHHHHHHHHHH---TTSCGGGCTTTTC
T ss_pred HHHHHHHHHHhhhhhhccchhcccccccccccccccccccceeeeeecccCCchhhhHHHHHHH---hhCcHhhcccCcc
Confidence 7521 0000 0 00 000 000 0001111 13455443 2
Q ss_pred hhhhhcCCC--CCCcceeEeccCCCCCcceecCCCCcceEEEEE-eEEEEEEeCCCCCCCCcc--cCCCCCcccCCCchh
Q 042108 279 DLFSVLGNE--RPDYRWVIIGPAGSGSSFHMDPNSTSAWNAIIK-GSKKWILFPPDVVPPGVH--PSSDGAEVACPVSIM 353 (406)
Q Consensus 279 d~~~~l~~~--rp~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~-G~K~w~L~pP~~~~~~l~--p~~d~~~v~sp~~~~ 353 (406)
++++.++.. .....||+||..||.|++|.+.+++..+|.++. |.|.|..+|++... .+. ....+.+... .
T Consensus 188 slL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~-~~e~l~~k~~~d~~~----~ 262 (332)
T 2xxz_A 188 NMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWE-TISAFCDRHGVDYLT----G 262 (332)
T ss_dssp CCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHH-HHHHHHHHTTCCTTT----S
T ss_pred chhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHH-HHHHHHHhcCCchhh----c
Confidence 344444432 234579999999999999999998888888887 68899999998643 110 0000111100 0
Q ss_pred hhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeeccC
Q 042108 354 EWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 354 ~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
.|+.. -..+.+.+.+.+.++++|||++++++|-+|+|.|.+-|++++.||.+
T Consensus 263 ~~~~~-p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~ 314 (332)
T 2xxz_A 263 SWWPI-LDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGP 314 (332)
T ss_dssp CBCCC-HHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEES
T ss_pred eecCC-HHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCC
Confidence 11111 12334445677999999999999999999999999999999999853
No 17
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.02 E-value=1.2e-10 Score=83.24 Aligned_cols=46 Identities=30% Similarity=0.551 Sum_probs=40.2
Q ss_pred ccccCCCHHHHHHHhcCCCHHHHHHHHHHhHHHHHhcCChhHHHHH
Q 042108 62 GNLQTLTDELVIDVLGFLDATQLGVLATVSKSFYVFANHEPLWRNL 107 (406)
Q Consensus 62 g~l~~Lpdelll~il~~Ld~~~L~~l~~~~r~~y~~~~~d~lWr~~ 107 (406)
..+..||+|++++||+||++.||.++++|||+|+.++.++.+||.+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~l 52 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 52 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC---
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHhc
Confidence 4578899999999999999999999999999999999999999975
No 18
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=99.01 E-value=3.5e-09 Score=108.63 Aligned_cols=209 Identities=19% Similarity=0.267 Sum_probs=131.4
Q ss_pred hcCCCCC-EEEecCCC--cCcccCCCCHHHHHHHhCCceEEEcc-------------------------eecchHHHHHh
Q 042108 191 FEEPNKP-VLLEGCLD--NWAALKKWDRDYLVNVCGDVRFAVGP-------------------------VEMKLEEYFRY 242 (406)
Q Consensus 191 y~~~~~P-vIi~~~~~--~Wpa~~~Wt~~~L~~~~gd~~v~v~~-------------------------~~~~l~~f~~~ 242 (406)
...++.| +||+|+++ .+. ...++.+.|.+..|+..|.|.. ..+|+++|.+|
T Consensus 90 c~~~~~pi~vIrgl~~~l~ld-~~lFs~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~s~~~~~ti~kya~y 168 (531)
T 3avr_A 90 CTNPNNPVTVIRGLAGALKLD-LGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHTTIAKYAQY 168 (531)
T ss_dssp HHCTTCSEEEEETHHHHHTCC-GGGGSHHHHHHHCTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCEEEEEEEHHHHHHH
T ss_pred hcCCCCCeEEEccchhccCcC-cccCCHHHHHHhCCCCeeeeeecCCCCCCcCccccCCceeeeeccccCcccHHHHHHH
Confidence 3346789 88999864 333 2468899999999998886632 24789999887
Q ss_pred hhcc-----CC--CCCeeecCc----------------------------cccc--ccC-ccccCCCCCCcCh----hhh
Q 042108 243 SDSV-----RE--ERPLYLFDP----------------------------KFAD--KVP-TLGGEYEVPVYFR----EDL 280 (406)
Q Consensus 243 ~~~~-----~~--~~~~Yl~d~----------------------------~~~~--~~p-~L~~d~~~P~~f~----~d~ 280 (406)
.... .+ ++..+..+. ++.+ ++. ++.+--.+|.+++ .++
T Consensus 169 q~~s~~e~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~fgtNiDL~~~~~w~~ql~el~kLP~~lr~~~~gsl 248 (531)
T 3avr_A 169 QASSFQESLREENEKRSHHKDHSDSESTSSDNSGRRRKGPFKTIKFGTNIDLSDDKKWKLQLHELTKLPAFVRVVSAGNL 248 (531)
T ss_dssp HHHHHHHTC------------------------------CCCEEEEEEEEECCCTTTTHHHHHHGGGSCGGGCSSCTTCG
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCcccccccchhccccCCCcccccccccCCCchhhhHHHHHHHHhCCHHHcccCccch
Confidence 5421 11 111111000 0000 000 0000112676654 356
Q ss_pred hhhcCCC--CCCcceeEeccCCCCCcceecCCCCcceEEEEEe-EEEEEEeCCCCCCCCccc--CCCCCcccCCCchhhh
Q 042108 281 FSVLGNE--RPDYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKG-SKKWILFPPDVVPPGVHP--SSDGAEVACPVSIMEW 355 (406)
Q Consensus 281 ~~~l~~~--rp~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G-~K~w~L~pP~~~~~~l~p--~~d~~~v~sp~~~~~w 355 (406)
++.++.. .-...||+||..||.|++|.+.+++..+|.++.| .|.|..+|+++.. .+.- ...+.+... ..|
T Consensus 249 L~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~-k~e~l~~k~~~~~~~----~~~ 323 (531)
T 3avr_A 249 LSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWG-VLNDFCEKNNLNFLM----GSW 323 (531)
T ss_dssp GGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHH-HHHHHHHHTTCCTTT----SCB
T ss_pred hhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHH-HHHHHHHHcCCChhh----cee
Confidence 6666643 2346799999999999999999998889988875 8899999998743 1000 000111000 012
Q ss_pred hhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeeccC
Q 042108 356 FMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 356 ~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
+.. -..+.+.+.+.+.++++|||.+++++|-+|+|.|.+-+++++.||.+
T Consensus 324 ~~~-p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~ 373 (531)
T 3avr_A 324 WPN-LEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGP 373 (531)
T ss_dssp CCC-HHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECC
T ss_pred ecC-HHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEecc
Confidence 211 11233345677999999999999999999999999999999999864
No 19
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.82 E-value=1.4e-09 Score=104.04 Aligned_cols=52 Identities=23% Similarity=0.395 Sum_probs=49.2
Q ss_pred ccccCCCHHHHHHHhcCCCHHHHHHHHHHhHHHHHhcCChhHHHHHHHhhcc
Q 042108 62 GNLQTLTDELVIDVLGFLDATQLGVLATVSKSFYVFANHEPLWRNLALDNLK 113 (406)
Q Consensus 62 g~l~~Lpdelll~il~~Ld~~~L~~l~~~~r~~y~~~~~d~lWr~~~~~~~~ 113 (406)
|.|..||+|++++||+||+|+||+++++|||.|+.+++|+-|||.+|.+..+
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 6788999999999999999999999999999999999999999999998543
No 20
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.82 E-value=2.9e-09 Score=102.47 Aligned_cols=68 Identities=21% Similarity=0.236 Sum_probs=57.5
Q ss_pred ccccCCCHHHHHHHhcCCCHHHHH-HHHHHhHHHHHhcCChhHHHHHHHhhccCC----cccCCchHHHHhhh
Q 042108 62 GNLQTLTDELVIDVLGFLDATQLG-VLATVSKSFYVFANHEPLWRNLALDNLKGE----FMFNGSWKSTFVSA 129 (406)
Q Consensus 62 g~l~~Lpdelll~il~~Ld~~~L~-~l~~~~r~~y~~~~~d~lWr~~~~~~~~~~----~~~~gsWr~t~~~~ 129 (406)
+.+..||+|+|+.||++|++++|+ ++++|||+|+.++.++.+||.+|.+..--. .....+||..|+..
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~Wk~~y~~~ 121 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGSADEERDHWQQFYFLS 121 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHTTCCCC-----CCSCHHHHHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhccCcccccccCCCCCChhhhhehe
Confidence 456789999999999999999999 999999999999999999999999862110 11356899999974
No 21
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.54 E-value=6.2e-08 Score=96.64 Aligned_cols=70 Identities=24% Similarity=0.427 Sum_probs=57.6
Q ss_pred cccccCCCHHHHHHHhcCCCHHHHHHHHHHhHHHHHhcCChhHHHHHHHhhccCCc------------ccCCchHHHHhh
Q 042108 61 LGNLQTLTDELVIDVLGFLDATQLGVLATVSKSFYVFANHEPLWRNLALDNLKGEF------------MFNGSWKSTFVS 128 (406)
Q Consensus 61 lg~l~~Lpdelll~il~~Ld~~~L~~l~~~~r~~y~~~~~d~lWr~~~~~~~~~~~------------~~~gsWr~t~~~ 128 (406)
...+..||+|++++||+||++++|+++++|||+|+.++.++.+||.+|.+...... ....+||..|+.
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhh
Confidence 34578899999999999999999999999999999999999999999976532110 122579999986
Q ss_pred hc
Q 042108 129 AC 130 (406)
Q Consensus 129 ~~ 130 (406)
..
T Consensus 96 ~~ 97 (445)
T 2ovr_B 96 QH 97 (445)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 22
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.41 E-value=7e-08 Score=96.24 Aligned_cols=53 Identities=23% Similarity=0.433 Sum_probs=48.5
Q ss_pred ccccCCCHH----HHHHHhcCCCHHHHHHHHHHhHHHHHhcCChhHHHHHHHhhccC
Q 042108 62 GNLQTLTDE----LVIDVLGFLDATQLGVLATVSKSFYVFANHEPLWRNLALDNLKG 114 (406)
Q Consensus 62 g~l~~Lpde----lll~il~~Ld~~~L~~l~~~~r~~y~~~~~d~lWr~~~~~~~~~ 114 (406)
-.++.||+| ++++||+|||+++|+++++|||+|+.+++++.|||.+|.+.+..
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~ 65 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRT 65 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTS
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCc
Confidence 346679999 99999999999999999999999999999999999999987643
No 23
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=98.41 E-value=1.5e-06 Score=84.71 Aligned_cols=111 Identities=17% Similarity=0.181 Sum_probs=81.5
Q ss_pred CcceeEeccCCCCCcceecCCCCcceEEEEEeE-EEEEEeCCCCCCC------CcccCC--CCCcc-cCCCchhhhhhhh
Q 042108 290 DYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGS-KKWILFPPDVVPP------GVHPSS--DGAEV-ACPVSIMEWFMNF 359 (406)
Q Consensus 290 ~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~-K~w~L~pP~~~~~------~l~p~~--d~~~v-~sp~~~~~w~~~~ 359 (406)
...||++|..+|.+.+|.+.+++..+|.+..|. |.|..+|+++... .++|.. ...+. ....-+ .
T Consensus 176 ntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~l------i 249 (354)
T 3dxt_A 176 NTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVAL------I 249 (354)
T ss_dssp CCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGCCEE------E
T ss_pred cceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhhhhcHHHHhcCccc------C
Confidence 356999999999999999999988999999997 9999999987430 111110 00000 000000 0
Q ss_pred hh-hhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeeccC
Q 042108 360 YG-ATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 360 ~p-~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
.| .+.+.+.+.+.++++|||.+++-+|.+|.+.|.+-+++.+.||.+
T Consensus 250 sP~~L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~ 297 (354)
T 3dxt_A 250 SPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFAT 297 (354)
T ss_dssp CHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECC
T ss_pred CHHHHHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCc
Confidence 01 233345677899999999999999999999999999999999964
No 24
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.38 E-value=1.6e-07 Score=93.81 Aligned_cols=51 Identities=16% Similarity=0.335 Sum_probs=47.0
Q ss_pred ccccCCCHHHHHHHhcCCCHHHHHHHHHHhHHHHHhcCC-hhHHHHHHHhhc
Q 042108 62 GNLQTLTDELVIDVLGFLDATQLGVLATVSKSFYVFANH-EPLWRNLALDNL 112 (406)
Q Consensus 62 g~l~~Lpdelll~il~~Ld~~~L~~l~~~~r~~y~~~~~-d~lWr~~~~~~~ 112 (406)
..+..||+|++++||+|||+++|+++++|||.|+.++.+ +.|||.+|++..
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~ 64 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISEN 64 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTT
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccc
Confidence 456789999999999999999999999999999999998 899999998653
No 25
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=98.36 E-value=1.9e-06 Score=87.27 Aligned_cols=209 Identities=17% Similarity=0.274 Sum_probs=131.1
Q ss_pred hcCCCCCE-EEecCCCcCc-ccCCCCHHHHHHHhCCceEEEcc-------------------------eecchHHHHHhh
Q 042108 191 FEEPNKPV-LLEGCLDNWA-ALKKWDRDYLVNVCGDVRFAVGP-------------------------VEMKLEEYFRYS 243 (406)
Q Consensus 191 y~~~~~Pv-Ii~~~~~~Wp-a~~~Wt~~~L~~~~gd~~v~v~~-------------------------~~~~l~~f~~~~ 243 (406)
...++.|+ ||+|++..-. ....++...|.+..|+.+|.|.. ..+|+++|.+|.
T Consensus 66 c~~~~~pi~vIrgl~~~l~ldl~lFstk~l~e~~~~~~ievr~Q~~q~~d~N~d~~~~~~~W~~~s~~s~tti~kyaqYq 145 (510)
T 4ask_A 66 CTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQ 145 (510)
T ss_dssp HHCTTCSEEEEETHHHHTTCCGGGGSHHHHHHHHTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCCEEEEEEHHHHHHHH
T ss_pred hcCCCCCeEEeechhhhhccCcCccchhhHHHhCCCCeEEEeeccCCCCCccccccCCcccccccCccccccHHHHHHHH
Confidence 44567886 5688754211 12357899999999999887741 256788887765
Q ss_pred hcc-----CCC---------------------------CCeeecCcc--ccc--ccC-ccccCCCCCCcCh----hhhhh
Q 042108 244 DSV-----REE---------------------------RPLYLFDPK--FAD--KVP-TLGGEYEVPVYFR----EDLFS 282 (406)
Q Consensus 244 ~~~-----~~~---------------------------~~~Yl~d~~--~~~--~~p-~L~~d~~~P~~f~----~d~~~ 282 (406)
... +++ .++.-|..+ +.+ .+. ++.+--.+|.+++ .++++
T Consensus 146 ~~sf~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~FgtNiDL~d~~~wk~ql~eL~kLP~flr~~~~gslLs 225 (510)
T 4ask_A 146 ASSFQESLQEEKESEDEESEEPDSTTGTPPSSAPDPKNHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLS 225 (510)
T ss_dssp HHHHHHHC------------------------------CCEEEEEEEEECCCTTTTHHHHHHGGGSCGGGSSSCTTBGGG
T ss_pred HHHHHHHHHHhhhhccccccccccccCCccccCCCCCCCceeeeeeeecCCcchhhHHHHHHHhhCcHHhCcCCCCchhh
Confidence 421 000 001112111 110 111 1111124676664 35777
Q ss_pred hcCCC--CCCcceeEeccCCCCCcceecCCCCcceEEEEEe-EEEEEEeCCCCCCCCcc--cCCCCCcccCCCchhhhhh
Q 042108 283 VLGNE--RPDYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKG-SKKWILFPPDVVPPGVH--PSSDGAEVACPVSIMEWFM 357 (406)
Q Consensus 283 ~l~~~--rp~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G-~K~w~L~pP~~~~~~l~--p~~d~~~v~sp~~~~~w~~ 357 (406)
.++.. .-...||+||..||.|++|.+.+++..+|.++.| .|.|..+|++... .+. ....+.+... ..|+.
T Consensus 226 ~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~-k~e~l~~k~~~d~l~----~~~~p 300 (510)
T 4ask_A 226 HVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWE-TISAFCDRHGVDYLT----GSWWP 300 (510)
T ss_dssp GSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHH-HHHHHHHHTTCCTTT----SCBCC
T ss_pred hCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHH-HHHHHHHHhCcchhh----ccccC
Confidence 77754 2345699999999999999999988899998865 8999999998643 000 0001111110 12221
Q ss_pred hhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeecc
Q 042108 358 NFYGATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYV 405 (406)
Q Consensus 358 ~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv 405 (406)
. -..+.+.+.+.+.++++|||.+++++|-+|.|.|.+-++.++.|+.
T Consensus 301 s-pe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNva 347 (510)
T 4ask_A 301 I-LDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVG 347 (510)
T ss_dssp C-HHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred C-HHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEec
Confidence 1 1133444567799999999999999999999999999999999985
No 26
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=98.11 E-value=1.4e-05 Score=78.32 Aligned_cols=111 Identities=17% Similarity=0.182 Sum_probs=80.3
Q ss_pred cceeEeccCCCCCcceecCCCCcceEEEEEeE-EEEEEeCCCCCCC------CcccC--CCCCcc-cCCCchhhhhhhhh
Q 042108 291 YRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGS-KKWILFPPDVVPP------GVHPS--SDGAEV-ACPVSIMEWFMNFY 360 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~-K~w~L~pP~~~~~------~l~p~--~d~~~v-~sp~~~~~w~~~~~ 360 (406)
..||++|..+|.+.+|.+.++...+|.+..|. |.|..+|+++... ..+|. ....+. ....-+.. +
T Consensus 220 tP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lis--P--- 294 (373)
T 3opt_A 220 DSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLAS--P--- 294 (373)
T ss_dssp CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHHSSCSSCTTTSCEEEC--H---
T ss_pred hhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhhhhhCHHHhhCCcccCC--H---
Confidence 56999999999999999998888899888885 9999999987430 11221 011110 00000000 0
Q ss_pred hhhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeeccC
Q 042108 361 GATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 361 p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
..+.+.+.+.+.++++|||.+++=+|-+|.+.|.+-++|.+.||.+
T Consensus 295 ~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~ 340 (373)
T 3opt_A 295 KLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFAL 340 (373)
T ss_dssp HHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECC
T ss_pred HHHHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCc
Confidence 1233345677899999999999989999999999999999999964
No 27
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=97.90 E-value=2.6e-05 Score=76.98 Aligned_cols=111 Identities=17% Similarity=0.197 Sum_probs=80.1
Q ss_pred CcceeEeccCCCCCcceecCCCCcceEEEEEe-EEEEEEeCCCCCCC------CcccCC--CCCccc-CCCchhhhhhhh
Q 042108 290 DYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKG-SKKWILFPPDVVPP------GVHPSS--DGAEVA-CPVSIMEWFMNF 359 (406)
Q Consensus 290 ~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G-~K~w~L~pP~~~~~------~l~p~~--d~~~v~-sp~~~~~w~~~~ 359 (406)
...||+||..+|.+.+|.+.++...+|.+-.| .|.|..+|+++... ..+|.. ...+.. ... +. .
T Consensus 194 n~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~~~~L~h~~----~~--i 267 (381)
T 2ox0_A 194 NTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKM----TL--I 267 (381)
T ss_dssp TSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGSC----EE--E
T ss_pred ccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhhhhcchHHhhccc----cc--c
Confidence 35699999999999999998888888988666 69999999987430 111210 000000 000 00 0
Q ss_pred hh-hhhcCCCCcEEEEEcCCCEEEeCCCCeeeeeecCccEEEeeeccC
Q 042108 360 YG-ATKNWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVS 406 (406)
Q Consensus 360 ~p-~~~~~~~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~nFv~ 406 (406)
-| .+.+.+.+.+.++++|||.+++=+|-+|.+.|.+-+++.+.||.+
T Consensus 268 sP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~ 315 (381)
T 2ox0_A 268 SPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFAT 315 (381)
T ss_dssp CHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECC
T ss_pred CHHHHHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCc
Confidence 01 223345677999999999999999999999999999999999964
No 28
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.16 E-value=0.00011 Score=70.51 Aligned_cols=49 Identities=31% Similarity=0.543 Sum_probs=43.9
Q ss_pred ccccCCCHHHHHHHhcCCCHHHHHHHHHHhHHHHHhcCChhHHHHHHHh
Q 042108 62 GNLQTLTDELVIDVLGFLDATQLGVLATVSKSFYVFANHEPLWRNLALD 110 (406)
Q Consensus 62 g~l~~Lpdelll~il~~Ld~~~L~~l~~~~r~~y~~~~~d~lWr~~~~~ 110 (406)
..++.||+|++.+||+||+..++.+++.|||+|+..+.+..+|+.+-+.
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~l~l~ 55 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLT 55 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSEEECT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhheeeccc
Confidence 4678899999999999999999999999999999999888888866543
No 29
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=96.39 E-value=0.0013 Score=52.15 Aligned_cols=60 Identities=17% Similarity=0.276 Sum_probs=37.2
Q ss_pred CCHHHHHHHhcCCCHHHHHHHHHHhHHHHHhcCChhHHHHHHHhhccCC-cccCCchHHHHhh
Q 042108 67 LTDELVIDVLGFLDATQLGVLATVSKSFYVFANHEPLWRNLALDNLKGE-FMFNGSWKSTFVS 128 (406)
Q Consensus 67 Lpdelll~il~~Ld~~~L~~l~~~~r~~y~~~~~d~lWr~~~~~~~~~~-~~~~gsWr~t~~~ 128 (406)
-|-++|.-||..++++.|.++-.-|-.+ .-..|+||+.+|.+.++.. ..-..|||++|++
T Consensus 13 ~Py~lL~PVLek~tp~QL~~IE~~nP~L--~~dTdeLWk~~c~rdF~~~~p~e~esWRelY~r 73 (97)
T 4hfx_A 13 VPYSVLEPVLERCTPDQLYRIEEYNHVL--IEETDQLWKVHCHRDFKEERPEEYESWREMYLR 73 (97)
T ss_dssp -------CCGGGCCHHHHHHHHTC--------CCHHHHHHHC----CCSCCCSSSCHHHHHHH
T ss_pred CcHHHHHHHHccCCHHHHHHHHHhCccc--chhhHHHHHHHHHhHCcccCCCCCCCHHHHHHH
Confidence 6888999999999999999999988744 3467999999999998753 3344699999997
No 30
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=96.38 E-value=0.0086 Score=60.83 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=52.8
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|+...+|++++. +-|..++.|+=+..++.+.-. ..+..+|++
T Consensus 330 ~pG~~~~pH~Hp~A-~Ei~yV~~G~~~v~vv~~~g~-----------------------------------~~~~~~l~~ 373 (459)
T 2e9q_A 330 YSNAMVAPHYTVNS-HSVMYATRGNARVQVVDNFGQ-----------------------------------SVFDGEVRE 373 (459)
T ss_dssp CTTCEEEEEEESSC-CEEEEEEEEEEEEEEECTTSC-----------------------------------EEEEEEEET
T ss_pred eCCcCccceECCCC-CEEEEEEeeEEEEEEEeCCCC-----------------------------------EEEeeEEeC
Confidence 35778889999986 489999999999999875421 236788999
Q ss_pred CCEEEeCCCCeeeeeecCccE
Q 042108 378 GEVIFVPNGWWHLVINLEESI 398 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sI 398 (406)
||+++||.|+.|...|.++.+
T Consensus 374 GDv~v~P~G~~H~~~ng~~~~ 394 (459)
T 2e9q_A 374 GQVLMIPQNFVVIKRASDRGF 394 (459)
T ss_dssp TCEEEECTTCEEEEEEEEEEE
T ss_pred CcEEEECCCCEEEEEeCCCCe
Confidence 999999999999999964433
No 31
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=96.37 E-value=0.01 Score=60.76 Aligned_cols=69 Identities=13% Similarity=0.106 Sum_probs=55.2
Q ss_pred eEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 294 VIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
+-+. +|+..++|++++.+ -|..++.|+=++.++.+.-. +.+..
T Consensus 363 v~L~-pGgm~~PHwHp~A~-Ei~yVl~G~~rv~~V~~~g~-----------------------------------~~f~~ 405 (496)
T 3ksc_A 363 GSLH-KNAMFVPHYNLNAN-SIIYALKGRARLQVVNCNGN-----------------------------------TVFDG 405 (496)
T ss_dssp EEEE-TTCEEEEEEESSCC-EEEEEEESEEEEEEECTTSC-----------------------------------EEEEE
T ss_pred EEee-CCeEECCeeCCCCC-EEEEEEeceEEEEEEeCCCc-----------------------------------EEEEE
Confidence 3444 47888999999964 79999999999999876521 23678
Q ss_pred EEcCCCEEEeCCCCeeeeeecCccEE
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEESIA 399 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~sIa 399 (406)
+|++||+++||.|+.|...|.++.+.
T Consensus 406 ~l~~GDV~v~P~G~~H~~~a~~e~~~ 431 (496)
T 3ksc_A 406 ELEAGRALTVPQNYAVAAKSLSDRFS 431 (496)
T ss_dssp EEETTCEEEECTTCEEEEEECSSEEE
T ss_pred EecCCeEEEECCCCEEEEEeCCCCEE
Confidence 99999999999999999888865443
No 32
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=96.24 E-value=0.013 Score=60.27 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=52.3
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|+..++|++++. +-|..+|.|+=++.++.+.- .+.+..++++
T Consensus 380 ~PG~~~~pH~Hp~a-~Ei~yVl~G~~~v~vv~~~G-----------------------------------~~~~~~~l~~ 423 (510)
T 3c3v_A 380 YRNALFVPHYNTNA-HSIIYALRGRAHVQVVDSNG-----------------------------------NRVYDEELQE 423 (510)
T ss_dssp ETTCEEEEEEESSC-CEEEEEEESEEEEEEECTTS-----------------------------------CEEEEEEEET
T ss_pred cCCceecceECCCC-CEEEEEEeCEEEEEEEeCCC-----------------------------------CEEEeEEEcC
Confidence 45778899999975 37999999998888865421 0226778999
Q ss_pred CCEEEeCCCCeeeeeecCccEEE
Q 042108 378 GEVIFVPNGWWHLVINLEESIAI 400 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sIav 400 (406)
||+++||.|+.|.+.|.++.+.+
T Consensus 424 GDv~viP~G~~H~~~Ng~e~l~~ 446 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKSQSDNFEY 446 (510)
T ss_dssp TCEEEECTTCEEEEEECSSEEEE
T ss_pred CcEEEECCCCeEEEEeCCCCEEE
Confidence 99999999999999996555444
No 33
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=96.21 E-value=0.014 Score=59.56 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=53.5
Q ss_pred eEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 294 VIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
+-+. +|+..++|++++. +-|..++.|+=++.+..+.- ...+..
T Consensus 343 v~l~-pGa~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~G-----------------------------------~~~~~~ 385 (476)
T 1fxz_A 343 GSLR-KNAMFVPHYNLNA-NSIIYALNGRALIQVVNCNG-----------------------------------ERVFDG 385 (476)
T ss_dssp EEEC-TTCEEEEEEETTC-CEEEEEEESEEEEEEECTTS-----------------------------------CEEEEE
T ss_pred EEec-CCceecceECCCC-CEEEEEEeCEEEEEEEecCC-----------------------------------CEEeee
Confidence 3444 5778899999975 37999999998888865321 022677
Q ss_pred EEcCCCEEEeCCCCeeeeeecCccEEE
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEESIAI 400 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~sIav 400 (406)
++++||++|||.|+.|.+.|.++.+.+
T Consensus 386 ~l~~GDv~viP~G~~H~~~ng~~~l~~ 412 (476)
T 1fxz_A 386 ELQEGRVLIVPQNFVVAARSQSDNFEY 412 (476)
T ss_dssp EEETTCEEEECTTCEEEEEECSTTEEE
T ss_pred EEcCCCEEEECCCCeEEEEeCCCCEEE
Confidence 899999999999999999996555443
No 34
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=96.16 E-value=0.011 Score=60.75 Aligned_cols=71 Identities=11% Similarity=0.071 Sum_probs=54.1
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+-+.+ |+..++|++++. +-|..+|.|+-++.++.+.-. ..+.
T Consensus 398 ~v~L~p-Ggm~~PHwHp~A-~Ei~yVl~G~~rv~~V~~~G~-----------------------------------~v~~ 440 (531)
T 3fz3_A 398 RGFFYR-NGIYSPHWNVNA-HSVVYVIRGNARVQVVNENGD-----------------------------------AILD 440 (531)
T ss_dssp EEEECT-TCEEEEEEESSC-CEEEEEEEEEEEEEEECTTSC-----------------------------------EEEE
T ss_pred EEEeec-CccccceEcCCC-CEEEEEEeCcEEEEEEeCCCc-----------------------------------EEEE
Confidence 344554 667789999985 379999999999999765310 2368
Q ss_pred EEEcCCCEEEeCCCCeeeeeecCccEEE
Q 042108 373 CICKAGEVIFVPNGWWHLVINLEESIAI 400 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~~sIav 400 (406)
.+|++||++|||.|+.|...+.++.+.+
T Consensus 441 ~~L~~GDV~v~P~G~~H~~~ag~e~l~f 468 (531)
T 3fz3_A 441 QEVQQGQLFIVPQNHGVIQQAGNQGFEY 468 (531)
T ss_dssp EEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEecCCeEEEECCCCeEEEecCCCCEEE
Confidence 8999999999999999987765554443
No 35
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=95.91 E-value=0.021 Score=57.97 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=52.5
Q ss_pred eEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 294 VIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
+-+. +|+..++|++++.+ -|..+++|+=++.++.+.-. +.+..
T Consensus 328 v~L~-pGgm~~PHwHp~A~-Ei~yVl~G~~rv~~V~~~g~-----------------------------------~~f~~ 370 (466)
T 3kgl_A 328 GSIR-QNAMVLPQWNANAN-AVLYVTDGEAHVQVVNDNGD-----------------------------------RVFDG 370 (466)
T ss_dssp EEEE-TTEEEEEEEESSCC-EEEEEEESEEEEEEECTTSC-----------------------------------EEEEE
T ss_pred EEee-cCcEeeeeECCCCC-EEEEEEeceEEEEEEeCCCc-----------------------------------EEEEe
Confidence 3444 47788999999864 79999999999999876521 23788
Q ss_pred EEcCCCEEEeCCCCeeeeeecCc
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+|++||+++||.|+.|...+.++
T Consensus 371 ~l~~GDV~v~P~G~~H~~~ag~e 393 (466)
T 3kgl_A 371 QVSQGQLLSIPQGFSVVKRATSE 393 (466)
T ss_dssp EEETTCEEEECTTCEEEEEECSS
T ss_pred EecCCcEEEECCCCeEEEEcCCC
Confidence 99999999999999998865544
No 36
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=95.71 E-value=0.027 Score=57.11 Aligned_cols=63 Identities=11% Similarity=0.147 Sum_probs=51.3
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|+..++|++++.+ -|..+++|+=++.++.+.-. +.+..+|++|
T Consensus 332 pGgm~~PHwHp~A~-Ei~yV~~G~~~v~vV~~~g~-----------------------------------~~f~~~l~~G 375 (465)
T 3qac_A 332 RNAMMAPHYNLNAH-NIMYCVRGRGRIQIVNDQGQ-----------------------------------SVFDEELSRG 375 (465)
T ss_dssp TTCEEEEEEESSCC-EEEEEEEEEEEEEEECTTSC-----------------------------------EEEEEEEETT
T ss_pred CCcEeeeEECCCCC-EEEEEEeCCEEEEEEeCCCc-----------------------------------EEEEEEecCC
Confidence 57788999999964 79999999999999876410 2378899999
Q ss_pred CEEEeCCCCeeeeeecCcc
Q 042108 379 EVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~~s 397 (406)
|+++||.|+.|...+-++.
T Consensus 376 DVfvvP~g~~h~~~ag~e~ 394 (465)
T 3qac_A 376 QLVVVPQNFAIVKQAFEDG 394 (465)
T ss_dssp CEEEECTTCEEEEEEEEEE
T ss_pred eEEEECCCcEEEEEcCCCC
Confidence 9999999999988765433
No 37
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=95.64 E-value=0.049 Score=44.02 Aligned_cols=61 Identities=15% Similarity=0.183 Sum_probs=47.9
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|.++.. -+..+++|+=.+.+ ..-+.+++|
T Consensus 44 ~~G~~~~~H~H~~~--e~~~Vl~G~~~~~i-----------------------------------------~~~~~~l~~ 80 (114)
T 3fjs_A 44 PAGKQVGSHSVAGP--STIQCLEGEVEIGV-----------------------------------------DGAQRRLHQ 80 (114)
T ss_dssp CTTCEEEEECCSSC--EEEEEEESCEEEEE-----------------------------------------TTEEEEECT
T ss_pred CCCCccCceeCCCc--EEEEEEECEEEEEE-----------------------------------------CCEEEEECC
Confidence 56777888988876 78888888765544 013678999
Q ss_pred CCEEEeCCCCeeeeeecCccEEEe
Q 042108 378 GEVIFVPNGWWHLVINLEESIAIT 401 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sIavt 401 (406)
||+++||+|=.|.+.|.+++..+.
T Consensus 81 Gd~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 81 GDLLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp TEEEEECTTCCEEEEESSSEEEEE
T ss_pred CCEEEECCCCcEEEEeCCCcEEEE
Confidence 999999999999999998865443
No 38
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=95.57 E-value=0.033 Score=57.07 Aligned_cols=66 Identities=12% Similarity=0.115 Sum_probs=51.2
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|+..++|++++. +-|..+|.|+=++.+..+.. .+.+..+|++
T Consensus 375 ~pG~~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~g-----------------------------------~~~~~~~l~~ 418 (493)
T 2d5f_A 375 YRNGIYSPHWNLNA-NSVIYVTRGKGRVRVVNAQG-----------------------------------NAVFDGELRR 418 (493)
T ss_dssp CTTCEEEEEEESSC-CEEEEEEEEEEEEEEECTTS-----------------------------------CEEEEEEEET
T ss_pred cCCceeeeeECCCC-CEEEEEEeceEEEEEEcCCC-----------------------------------CEEEeEEEcC
Confidence 34678899999975 37899999998888865331 0225678999
Q ss_pred CCEEEeCCCCeeeeeecCccEE
Q 042108 378 GEVIFVPNGWWHLVINLEESIA 399 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sIa 399 (406)
||++|||.|..|...|.++.+.
T Consensus 419 GDv~vvP~G~~H~~~n~~e~~~ 440 (493)
T 2d5f_A 419 GQLLVVPQNFVVAEQGGEQGLE 440 (493)
T ss_dssp TCEEEECTTCEEEEEEEEEEEE
T ss_pred CCEEEECCCCeEeeeeCCCCEE
Confidence 9999999999999998765443
No 39
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=95.50 E-value=0.042 Score=49.21 Aligned_cols=65 Identities=18% Similarity=0.356 Sum_probs=48.5
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|...++|+++.. .-+..+++|+=++.+..+.. + ..+.+..++++
T Consensus 80 ~pg~~~~~H~H~~~-~E~~~Vl~G~~~v~~~~~~~---------~------------------------~~~~~~~~l~~ 125 (201)
T 1fi2_A 80 APGGTNPPHIHPRA-TEIGMVMKGELLVGILGSLD---------S------------------------GNKLYSRVVRA 125 (201)
T ss_dssp CTTCEEEEEECTTC-CEEEEEEESEEEEEEECCGG---------G------------------------TTCEEEEEEET
T ss_pred CCCCCCCCeECCCC-CEEEEEEeCEEEEEEEcCCC---------C------------------------CCeEEEEEECC
Confidence 34667889999863 26899999998877753320 0 01225789999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-+|...|.++
T Consensus 126 GD~~~iP~g~~H~~~N~g~ 144 (201)
T 1fi2_A 126 GETFVIPRGLMHFQFNVGK 144 (201)
T ss_dssp TCEEEECTTCCEEEEECSS
T ss_pred CCEEEECCCCeEEEEeCCC
Confidence 9999999999999999854
No 40
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=95.49 E-value=0.043 Score=48.83 Aligned_cols=58 Identities=21% Similarity=0.385 Sum_probs=43.0
Q ss_pred CcceecCC-CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEE
Q 042108 303 SSFHMDPN-STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVI 381 (406)
Q Consensus 303 t~~H~D~~-~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~L 381 (406)
++.|+++. ++.-+..+++|+=.+.+-... .......++|||++
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~------------------------------------g~~~~~~l~~GD~v 129 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPE------------------------------------GDAKWISMEPGTVV 129 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTT------------------------------------CCEEEEEECTTCEE
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcC------------------------------------CcEEEEEECCCcEE
Confidence 67888864 233688889998777662100 12257799999999
Q ss_pred EeCCCCeeeeeecCc
Q 042108 382 FVPNGWWHLVINLEE 396 (406)
Q Consensus 382 fIP~gWwH~V~nl~~ 396 (406)
+||+|.+|...|..+
T Consensus 130 ~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 130 YVPPYWAHRTVNIGD 144 (190)
T ss_dssp EECTTCEEEEEECSS
T ss_pred EECCCCeEEEEECCc
Confidence 999999999999864
No 41
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.46 E-value=0.0064 Score=62.58 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=29.4
Q ss_pred cccCCCHHHHHHHhcCCC-HHHHHHHHHHhHHHHHh
Q 042108 63 NLQTLTDELVIDVLGFLD-ATQLGVLATVSKSFYVF 97 (406)
Q Consensus 63 ~l~~Lpdelll~il~~Ld-~~~L~~l~~~~r~~y~~ 97 (406)
.++.||||++.+||+||+ .+++.+++.|||+|+..
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 467799999999999999 99999999999999988
No 42
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=95.31 E-value=0.048 Score=53.40 Aligned_cols=63 Identities=17% Similarity=0.203 Sum_probs=49.8
Q ss_pred eccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEE
Q 042108 296 IGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECIC 375 (406)
Q Consensus 296 iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl 375 (406)
.=++|..+..|.++.. .++.++.|+=+.++ . .-+..+
T Consensus 274 ~l~pG~~~~~H~h~~~--ev~~v~~G~g~~~v------~-----------------------------------~~~~~~ 310 (354)
T 2d40_A 274 LLPKGFASRVARTTDS--TIYHVVEGSGQVII------G-----------------------------------NETFSF 310 (354)
T ss_dssp EECTTCBCCCBEESSC--EEEEEEEEEEEEEE------T-----------------------------------TEEEEE
T ss_pred EECCCCCCCceecCCc--EEEEEEeCeEEEEE------C-----------------------------------CEEEEE
Confidence 3366888888998876 78899999877765 0 036789
Q ss_pred cCCCEEEeCCCCeeeeeecCccEEEe
Q 042108 376 KAGEVIFVPNGWWHLVINLEESIAIT 401 (406)
Q Consensus 376 ~pGD~LfIP~gWwH~V~nl~~sIavt 401 (406)
++||++|||++.||++.|.++.+-++
T Consensus 311 ~~GD~~~vP~~~~H~~~n~e~~~l~~ 336 (354)
T 2d40_A 311 SAKDIFVVPTWHGVSFQTTQDSVLFS 336 (354)
T ss_dssp ETTCEEEECTTCCEEEEEEEEEEEEE
T ss_pred cCCCEEEECCCCeEEEEeCCCEEEEE
Confidence 99999999999999999977755544
No 43
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=95.25 E-value=0.11 Score=45.83 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=53.4
Q ss_pred eEeccCCCCCcceecCC------CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCC
Q 042108 294 VIIGPAGSGSSFHMDPN------STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWK 367 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~------~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~ 367 (406)
+++--+|..+|+|+++. -+-.|. ++.|.=+..+ ++.... ...+.-|... ...|
T Consensus 57 ~l~l~pGQ~~P~H~H~~~~~~~gK~E~~i-vr~G~v~l~~--~g~~~~-------~~~v~v~dg~----~~~~------- 115 (175)
T 2y0o_A 57 ELVLFPGQTCPEHRHPPVDGQEGKQETFR-CRYGKVYLYV--EGEKTP-------LPKVLPPQED----REHY------- 115 (175)
T ss_dssp EEEECTTCEEEEEECCCCTTSCCCCEEEE-EEEEEEEEEE--SSSCCS-------SCSCCCCGGG----GGGC-------
T ss_pred EEEECCCCcCCceECCCCCCCCCCceeEE-EecCEEEEEE--CCcccc-------CcceeccCCc----eeee-------
Confidence 34445699999999999 544777 6678744444 332210 0111111111 1112
Q ss_pred CCcEEEEEcCCCEEEeCCCCeeeeeecCccEEE
Q 042108 368 KRPIECICKAGEVIFVPNGWWHLVINLEESIAI 400 (406)
Q Consensus 368 ~~~~~~vl~pGD~LfIP~gWwH~V~nl~~sIav 400 (406)
...-+.+|+|||.+.||.|-||...+.++++-|
T Consensus 116 ~a~~~i~L~pGesvtIppg~~H~f~ageegvli 148 (175)
T 2y0o_A 116 TVWHEIELEPGGQYTIPPNTKHWFQAGEEGAVV 148 (175)
T ss_dssp CCCEEEEECTTCEEEECTTCCEEEEEEEEEEEE
T ss_pred cCCcEEEECCCCEEEECCCCcEEEEeCCCCEEE
Confidence 134688999999999999999999996655443
No 44
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=95.25 E-value=0.061 Score=42.97 Aligned_cols=62 Identities=21% Similarity=0.246 Sum_probs=46.8
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|.++.. -+..+++|+=...+ + .-..++.|
T Consensus 42 ~pg~~~~~H~H~~~--e~~~vl~G~~~~~~---~--------------------------------------~~~~~l~~ 78 (116)
T 2pfw_A 42 DKGAEGYVHAHRHS--QVSYVVEGEFHVNV---D--------------------------------------GVIKVLTA 78 (116)
T ss_dssp CTTEEEEEECCSSE--EEEEEEEECEEEEE---T--------------------------------------TEEEEECT
T ss_pred CCCCcCCcEECCcc--eEEEEEeeEEEEEE---C--------------------------------------CEEEEeCC
Confidence 45666778888754 68888888865554 0 02568999
Q ss_pred CCEEEeCCCCeeeeeecCccEEEee
Q 042108 378 GEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
||+++||+|-.|.+.|.+++..+..
T Consensus 79 Gd~~~ip~~~~H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 79 GDSFFVPPHVDHGAVCPTGGILIDT 103 (116)
T ss_dssp TCEEEECTTCCEEEEESSCEEEEEE
T ss_pred CCEEEECcCCceeeEeCCCcEEEEE
Confidence 9999999999999999987655543
No 45
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=95.19 E-value=0.0066 Score=48.20 Aligned_cols=25 Identities=24% Similarity=0.050 Sum_probs=22.3
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+..+.+||.+|||.|-||.+.|..+
T Consensus 60 ~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEEecCCcEEEEcCCCcEECEECCC
Confidence 4568899999999999999999964
No 46
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=95.18 E-value=0.061 Score=43.72 Aligned_cols=63 Identities=13% Similarity=0.239 Sum_probs=48.8
Q ss_pred eccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEE
Q 042108 296 IGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECIC 375 (406)
Q Consensus 296 iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl 375 (406)
.-++|...+.|.++.. -+..+++|+=.+.+ . .-..++
T Consensus 47 ~~~pg~~~~~H~H~~~--e~~~vl~G~~~~~~------~-----------------------------------~~~~~l 83 (126)
T 4e2g_A 47 RIEPNTEMPAHEHPHE--QAGVMLEGTLELTI------G-----------------------------------EETRVL 83 (126)
T ss_dssp EECTTCEEEEECCSSE--EEEEEEEECEEEEE------T-----------------------------------TEEEEE
T ss_pred EECCCCcCCCccCCCc--eEEEEEEeEEEEEE------C-----------------------------------CEEEEe
Confidence 3356777889998865 78899999866554 0 035689
Q ss_pred cCCCEEEeCCCCeeeeeecCc-cEEEe
Q 042108 376 KAGEVIFVPNGWWHLVINLEE-SIAIT 401 (406)
Q Consensus 376 ~pGD~LfIP~gWwH~V~nl~~-sIavt 401 (406)
.+||+++||+|-.|.+.|.++ +..+.
T Consensus 84 ~~Gd~~~ip~~~~H~~~~~~~~~~~l~ 110 (126)
T 4e2g_A 84 RPGMAYTIPGGVRHRARTFEDGCLVLD 110 (126)
T ss_dssp CTTEEEEECTTCCEEEECCTTCEEEEE
T ss_pred CCCCEEEECCCCcEEeEECCCCEEEEE
Confidence 999999999999999999987 55543
No 47
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.12 E-value=0.048 Score=52.87 Aligned_cols=74 Identities=22% Similarity=0.198 Sum_probs=50.3
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+....+|+...+|++... .-++.+|+|+=++.|..+... ..++
T Consensus 275 ~ls~~~~g~~rg~h~h~~~-~e~~~~~~G~~~~~~~~~~~~-----------------------------------~~~~ 318 (369)
T 3st7_A 275 SVNISKPGITKGNHWHHTK-NEKFLVVSGKGVIRFRHVNDD-----------------------------------EIIE 318 (369)
T ss_dssp EEEEECTTCEEEEEECSSC-CEEEEEEESEEEEEEEETTCC-----------------------------------CCEE
T ss_pred EEEEecCCceeccccccCc-ceEEEEEeeeEEEEEEcCCCC-----------------------------------cEEE
Confidence 4555567888888988764 368899999988888632211 1122
Q ss_pred EEEcCC---CEEEeCCCCeeeeeecCccEEEeee
Q 042108 373 CICKAG---EVIFVPNGWWHLVINLEESIAITQN 403 (406)
Q Consensus 373 ~vl~pG---D~LfIP~gWwH~V~nl~~sIavt~n 403 (406)
..+ +| ++||||.||||...|+++.=++..+
T Consensus 319 ~~~-~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~ 351 (369)
T 3st7_A 319 YYV-SGDKLEVVDIPVGYTHNIENLGDTDMVTIM 351 (369)
T ss_dssp EEE-ETTBCCEEEECTTEEEEEEECSSSCEEEEE
T ss_pred EEe-cCCcceEEEeCCCceEEeEEcCCCcEEEEE
Confidence 222 26 9999999999999999843333333
No 48
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=95.10 E-value=0.07 Score=51.91 Aligned_cols=60 Identities=20% Similarity=0.481 Sum_probs=47.1
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|+...+|++++. .-+..+++|+=++.++.++. ......+++|
T Consensus 61 pg~~~~~H~H~~~-~E~~yVl~G~~~~~v~~~~g------------------------------------~~~~~~l~~G 103 (361)
T 2vqa_A 61 PGAIRELHWHANA-AEWAYVMEGRTRITLTSPEG------------------------------------KVEIADVDKG 103 (361)
T ss_dssp TTCEEEEEECTTC-CEEEEEEESEEEEEEECTTS------------------------------------CEEEEEEETT
T ss_pred CCCCCCceeCCCC-CEEEEEEEeEEEEEEEeCCC------------------------------------cEEEEEEcCC
Confidence 4566678988732 38999999998888875531 0135689999
Q ss_pred CEEEeCCCCeeeeeecC
Q 042108 379 EVIFVPNGWWHLVINLE 395 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~ 395 (406)
|++|||+|.+|...|.+
T Consensus 104 D~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 104 GLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEECTTCEEEEEECS
T ss_pred CEEEECCCCeEEEEeCC
Confidence 99999999999999986
No 49
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=95.05 E-value=0.022 Score=50.20 Aligned_cols=60 Identities=17% Similarity=0.190 Sum_probs=45.3
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|+....| .+. ..-|..+++|+=+..+..++. ....+|++
T Consensus 49 ~pg~~~~pH-h~~-a~E~~yVl~G~~~v~v~~~~~-------------------------------------~~~~~l~~ 89 (178)
T 1dgw_A 49 KPNTLLLPH-HSD-SDLLVLVLEGQAILVLVNPDG-------------------------------------RDTYKLDQ 89 (178)
T ss_dssp CTTEEEEEE-EES-SEEEEEEEESEEEEEEEETTE-------------------------------------EEEEEEET
T ss_pred cCCcEecCc-CCC-CCEEEEEEeEEEEEEEEeCCC-------------------------------------cEEEEECC
Confidence 345566778 443 236999999998888764431 13568999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|..|...|.++
T Consensus 90 GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 90 GDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp TEEEEECTTCCEEEEECCS
T ss_pred CCEEEECCCCeEEEEeCCC
Confidence 9999999999999999854
No 50
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=95.02 E-value=0.07 Score=48.31 Aligned_cols=78 Identities=23% Similarity=0.204 Sum_probs=56.0
Q ss_pred cceeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCc
Q 042108 291 YRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRP 370 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~ 370 (406)
..+++.=++|..|+.|-+.. ..++.+++|+=+-..|-... ++. ++ . ..
T Consensus 80 ~v~~l~w~PGq~spiHdH~~--~~~~~VL~G~l~e~~y~~~~---------~g~----~l-------------~----~~ 127 (208)
T 2gm6_A 80 SIVSFVWGPGQRTPIHDHTV--WGLIGMLRGAEYSQPFVLDG---------SGR----PV-------------L----HG 127 (208)
T ss_dssp EEEEEEECTTCBCCSBCCSS--CEEEEEEESCEEEEEEEECT---------TSC----EE-------------E----CS
T ss_pred EEEEEEeCCCcccCcccCCc--ceEEEEecccEEEEEeecCC---------CCc----cc-------------c----cc
Confidence 34666668899999999985 49999999987776664221 110 00 0 11
Q ss_pred EEEEEcCCCEEEeCC--CCeeeeeec-Cc--cEEE
Q 042108 371 IECICKAGEVIFVPN--GWWHLVINL-EE--SIAI 400 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~--gWwH~V~nl-~~--sIav 400 (406)
-+.++.+||+.+++. |..|.|.|. ++ +|+|
T Consensus 128 ~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsL 162 (208)
T 2gm6_A 128 EPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISI 162 (208)
T ss_dssp CCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEE
T ss_pred ceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEE
Confidence 367899999999999 999999988 44 5554
No 51
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=94.98 E-value=0.16 Score=40.50 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=46.3
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|..+.. -+..+++|+=.+.+ ..-..+|++
T Consensus 46 ~~g~~~~~H~h~~~--e~~~vl~G~~~~~i-----------------------------------------~~~~~~l~~ 82 (114)
T 2ozj_A 46 ADGESVSEEEYFGD--TLYLILQGEAVITF-----------------------------------------DDQKIDLVP 82 (114)
T ss_dssp ETTSSCCCBCCSSC--EEEEEEEEEEEEEE-----------------------------------------TTEEEEECT
T ss_pred CCCCccccEECCCC--eEEEEEeCEEEEEE-----------------------------------------CCEEEEecC
Confidence 34556667876655 67888888855544 013668999
Q ss_pred CCEEEeCCCCeeeeeecCccEEEeee
Q 042108 378 GEVIFVPNGWWHLVINLEESIAITQN 403 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sIavt~n 403 (406)
||+++||++=.|.+.|.+++..+...
T Consensus 83 Gd~i~i~~~~~H~~~~~~~~~~~~i~ 108 (114)
T 2ozj_A 83 EDVLMVPAHKIHAIAGKGRFKMLQIT 108 (114)
T ss_dssp TCEEEECTTCCBEEEEEEEEEEEEEE
T ss_pred CCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 99999999999999998776655543
No 52
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=94.93 E-value=0.083 Score=52.50 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=22.8
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecC
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
-+..+++||+++||+|.||++.|..
T Consensus 332 e~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 332 KRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECC
T ss_pred EEEEEeCCCEEEECCCCeEEeEeCC
Confidence 4778999999999999999999974
No 53
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=94.83 E-value=0.16 Score=40.29 Aligned_cols=62 Identities=19% Similarity=0.249 Sum_probs=46.6
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|.+... -+..+++|+-.+.+ . .-..++.+
T Consensus 48 ~~g~~~~~H~H~~~--e~~~vl~G~~~~~~------~-----------------------------------~~~~~l~~ 84 (115)
T 1yhf_A 48 DKGQEIGRHSSPGD--AMVTILSGLAEITI------D-----------------------------------QETYRVAE 84 (115)
T ss_dssp CTTCEEEEECCSSE--EEEEEEESEEEEEE------T-----------------------------------TEEEEEET
T ss_pred CCCCccCCEECCCc--EEEEEEeCEEEEEE------C-----------------------------------CEEEEECC
Confidence 45666778888754 78888888866554 0 02568999
Q ss_pred CCEEEeCCCCeeeeeecCccEEEee
Q 042108 378 GEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
||+++||+|=.|.+.|.+++..+..
T Consensus 85 Gd~~~ip~~~~H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 85 GQTIVMPAGIPHALYAVEAFQMLLV 109 (115)
T ss_dssp TCEEEECTTSCEEEEESSCEEEEEE
T ss_pred CCEEEECCCCCEEEEECCCceEEEE
Confidence 9999999999999999987655443
No 54
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=94.82 E-value=0.05 Score=55.00 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=52.6
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|+-.+.|++++. +-|..+++|+=+..++.+.-.... .+ .-. ..+.+..++++|
T Consensus 290 pg~m~~PH~hp~A-~ei~~V~~G~~~v~vv~~~~~~~~-----~~------------------~g~--~~~~~~~~l~~G 343 (445)
T 2cav_A 290 EGALFVPHYNSRA-TVILVANEGRAEVELVGLEQQQQQ-----GL------------------ESM--QLRRYAATLSEG 343 (445)
T ss_dssp TTEEEEEEEESSC-EEEEEEEESCEEEEEEEC------------------------------------CCEEEEEEECTT
T ss_pred CCceeeeEECCCC-cEEEEEEeeEEEEEEEeCCCcccc-----cc------------------cCc--ceEEEEeEecCC
Confidence 4778889999987 589999999999999987532100 00 000 012478999999
Q ss_pred CEEEeCCCCeeeeeecCc
Q 042108 379 EVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~~ 396 (406)
|+++||.|+.|...|.++
T Consensus 344 dV~vvP~g~~h~~~n~~~ 361 (445)
T 2cav_A 344 DIIVIPSSFPVALKAASD 361 (445)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred cEEEEcCCcEEEEEcCCC
Confidence 999999999999999954
No 55
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=94.82 E-value=0.044 Score=54.92 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=52.6
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|+....|++++. +-|..+++|+=+..|+.|.-...+ . .+.+ . .+ ..+.+...|++|
T Consensus 258 ~g~~~~pH~h~~A-~Ei~~V~~G~~~v~~v~~~g~~~~---~-~~~~----------------~-~~-~~~~~~~~l~~G 314 (416)
T 1uij_A 258 EGALLLPHFNSKA-IVILVINEGDANIELVGIKEQQQK---Q-KQEE----------------E-PL-EVQRYRAELSED 314 (416)
T ss_dssp TTEEEEEEEESSC-EEEEEEEESEEEEEEEEEC---------------------------------C-CEEEEEEEEETT
T ss_pred CCcEecceEcCCC-cEEEEEEeeEEEEEEEcCCCcccc---c-cccc----------------c-cc-ceEEEEEEecCC
Confidence 5778899999986 479999999999999977532100 0 0000 0 00 012467799999
Q ss_pred CEEEeCCCCeeeeeecCc
Q 042108 379 EVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~~ 396 (406)
|+++||.|+.|...|.++
T Consensus 315 dv~vvP~g~~h~~~n~~~ 332 (416)
T 1uij_A 315 DVFVIPAAYPFVVNATSN 332 (416)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred cEEEECCCCeEEEEcCCC
Confidence 999999999999999954
No 56
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=94.72 E-value=0.14 Score=44.75 Aligned_cols=76 Identities=18% Similarity=0.393 Sum_probs=58.2
Q ss_pred CcceeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCC
Q 042108 290 DYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKR 369 (406)
Q Consensus 290 ~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~ 369 (406)
+..-+++|+++..+.+|.|+.+ -|..|++|.=...+...+... ..
T Consensus 34 ~~~V~~vgGPn~r~D~H~~~~e--E~Fy~lkG~m~l~v~d~g~~~---------------------------------~~ 78 (176)
T 1zvf_A 34 GFTVMIVGGPNERTDYHINPTP--EWFYQKKGSMLLKVVDETDAE---------------------------------PK 78 (176)
T ss_dssp SEEEEEECSSBCCSCEEECSSC--EEEEEEESCEEEEEEECSSSS---------------------------------CE
T ss_pred CEEEEEEcCCCcCCcCcCCCCc--eEEEEEeCEEEEEEEcCCCcc---------------------------------cc
Confidence 4556789999999999988877 999999998666654211100 01
Q ss_pred cEEEEEcCCCEEEeCCCCeeeeeecCccEEE
Q 042108 370 PIECICKAGEVIFVPNGWWHLVINLEESIAI 400 (406)
Q Consensus 370 ~~~~vl~pGD~LfIP~gWwH~V~nl~~sIav 400 (406)
..++.+++||+..+|+|=-|.-...++++.+
T Consensus 79 ~~dv~i~eGdmfllP~gvpHsP~r~~e~v~l 109 (176)
T 1zvf_A 79 FIDIIINEGDSYLLPGNVPHSPVRFADTVGI 109 (176)
T ss_dssp EEEEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred eeeEEECCCCEEEcCCCCCcCCcccCCcEEE
Confidence 2578999999999999999998777777765
No 57
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=94.68 E-value=0.088 Score=45.30 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=43.8
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|..+++|.+... -+..+++|+=.+.+ . .-..+++|
T Consensus 52 ~pG~~~~~H~H~~~--E~~~Vl~G~~~v~v------~-----------------------------------g~~~~l~~ 88 (156)
T 3kgz_A 52 DEGGYSTLERHAHV--HAVMIHRGHGQCLV------G-----------------------------------ETISDVAQ 88 (156)
T ss_dssp EEEEECCCBBCSSC--EEEEEEEEEEEEEE------T-----------------------------------TEEEEEET
T ss_pred CCCCccCceeCCCc--EEEEEEeCEEEEEE------C-----------------------------------CEEEEeCC
Confidence 45667788888765 67888888866654 0 13668999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||++|||+|-+|.+.|..+
T Consensus 89 Gd~i~ip~~~~H~~~n~g~ 107 (156)
T 3kgz_A 89 GDLVFIPPMTWHQFRANRG 107 (156)
T ss_dssp TCEEEECTTCCEEEECCSS
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999865
No 58
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=94.66 E-value=0.05 Score=54.15 Aligned_cols=68 Identities=10% Similarity=0.043 Sum_probs=53.5
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|+...+|++++. +-|..+++|+=+..++-+.... ++. ..+.+..++++|
T Consensus 248 pG~~~~PH~h~~A-~Ei~yVl~G~g~v~vv~~~~~~------~~~-----------------------g~~~~~~~l~~G 297 (397)
T 2phl_A 248 EGALFVPHYYSKA-IVILVVNEGEAHVELVGPKGNK------ETL-----------------------EYESYRAELSKD 297 (397)
T ss_dssp TTEEEEEEEESSC-EEEEEEEESEEEEEEEEECC--------CCS-----------------------CEEEEEEEEETT
T ss_pred CCcEeeeeEcCCC-CEEEEEEeeeEEEEEEeccccc------cCC-----------------------CceEEEEEecCC
Confidence 5778889999986 5799999999999998764321 000 013478999999
Q ss_pred CEEEeCCCCeeeeeecCc
Q 042108 379 EVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~~ 396 (406)
|+++||.|+.|...|.++
T Consensus 298 DV~vvP~G~~h~~~n~~~ 315 (397)
T 2phl_A 298 DVFVIPAAYPVAIKATSN 315 (397)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred CEEEECCCCeEEEEeCCC
Confidence 999999999999999974
No 59
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=94.63 E-value=0.1 Score=45.70 Aligned_cols=71 Identities=18% Similarity=0.291 Sum_probs=55.2
Q ss_pred cceeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCc
Q 042108 291 YRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRP 370 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~ 370 (406)
..-+++|++++.+.+|.++.+ -+..|++|.=...+-.. ...
T Consensus 36 ~~V~~v~Gpn~r~d~H~h~~d--E~FyvlkG~m~i~v~d~-------------------------------------g~~ 76 (174)
T 1yfu_A 36 FIVTVVGGPNHRTDYHDDPLE--EFFYQLRGNAYLNLWVD-------------------------------------GRR 76 (174)
T ss_dssp EEEEEECSCBCCCCEEECSSC--EEEEEEESCEEEEEEET-------------------------------------TEE
T ss_pred EEEEEEcCCCcCccCcCCCCc--eEEEEEeeEEEEEEEcC-------------------------------------Cce
Confidence 456778999999999998766 99999999855544210 012
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecC-ccEEE
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLE-ESIAI 400 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~-~sIav 400 (406)
..+++++||++.||+|=-|.-...+ +++.+
T Consensus 77 ~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~l 107 (174)
T 1yfu_A 77 ERADLKEGDIFLLPPHVRHSPQRPEAGSACL 107 (174)
T ss_dssp EEEEECTTCEEEECTTCCEEEEBCCTTCEEE
T ss_pred eeEEECCCCEEEeCCCCCcCccccCCCCEEE
Confidence 4789999999999999999987776 67654
No 60
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=94.63 E-value=0.083 Score=51.96 Aligned_cols=61 Identities=23% Similarity=0.383 Sum_probs=47.7
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|...+.|+++.. -|..+++|+=++.+...+. ..+..++++
T Consensus 87 ~pg~~~~~H~H~~~--E~~~Vl~G~~~~~~~~~~g------------------------------------~~~~~~l~~ 128 (385)
T 1j58_A 87 KPGAIRELHWHKEA--EWAYMIYGSARVTIVDEKG------------------------------------RSFIDDVGE 128 (385)
T ss_dssp CTTCEEEEEEESSC--EEEEEEEEEEEEEEECTTS------------------------------------CEEEEEEET
T ss_pred CCCCCCCCccCChh--eEEEEEeeeEEEEEEeCCC------------------------------------cEEEEEeCC
Confidence 34667788999854 8999999998887754211 113558999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|.+|...|.++
T Consensus 129 GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 129 GDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp TEEEEECTTCCEEEEEEEE
T ss_pred CCEEEECCCCeEEEEECCC
Confidence 9999999999999999865
No 61
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=94.54 E-value=0.092 Score=51.05 Aligned_cols=62 Identities=23% Similarity=0.510 Sum_probs=47.3
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|+..+.|.++.. .-+..+++|+=+..++.++. .....++++
T Consensus 242 ~pg~~~~~H~H~~~-~E~~~Vl~G~~~~~v~~~~g------------------------------------~~~~~~l~~ 284 (361)
T 2vqa_A 242 EPGAMRQLHWHPNA-DEWQYVLDGEMDLTVFASEG------------------------------------KASVSRLQQ 284 (361)
T ss_dssp CTTCEEEEEECSSC-CEEEEEEESCEEEEEECSTT------------------------------------CEEEEEECT
T ss_pred CCCcccccccCCCC-CEEEEEEeCEEEEEEEcCCC------------------------------------cEEEEEECC
Confidence 45667778988762 26888999998887764321 114678999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|.+|...|.++
T Consensus 285 GD~~~ip~~~~H~~~n~~~ 303 (361)
T 2vqa_A 285 GDVGYVPKGYGHAIRNSSQ 303 (361)
T ss_dssp TCEEEECTTCEEEEECCSS
T ss_pred CCEEEECCCCeEEeEECCC
Confidence 9999999999999999854
No 62
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=94.50 E-value=0.077 Score=41.33 Aligned_cols=25 Identities=28% Similarity=0.241 Sum_probs=23.0
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
..++.|||++++|+|-.|.+.|..+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCC
Confidence 5689999999999999999999864
No 63
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=94.40 E-value=0.15 Score=41.98 Aligned_cols=56 Identities=16% Similarity=0.226 Sum_probs=41.2
Q ss_pred CCCCCcceecCC-CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 299 AGSGSSFHMDPN-STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 299 ~gs~t~~H~D~~-~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++...++|.+.. . -++.+++|+=++.+ . + .-..+++|
T Consensus 52 ~g~~~~~H~H~~~~--E~~~vl~G~~~~~~------~-------~---------------------------~~~~~l~~ 89 (134)
T 2o8q_A 52 KEAKPTWHTHTVGF--QLFYVLRGWVEFEY------E-------D---------------------------IGAVMLEA 89 (134)
T ss_dssp ----CCCEEECCSC--EEEEEEESEEEEEE------T-------T---------------------------TEEEEEET
T ss_pred CCCCCCCEECCCCc--EEEEEEeCEEEEEE------C-------C---------------------------cEEEEecC
Confidence 566778999876 4 78899999876655 0 0 02568999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-.|...|.++
T Consensus 90 Gd~~~ip~g~~H~~~~~~~ 108 (134)
T 2o8q_A 90 GGSAFQPPGVRHRELRHSD 108 (134)
T ss_dssp TCEEECCTTCCEEEEEECT
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999643
No 64
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=94.29 E-value=0.063 Score=54.12 Aligned_cols=74 Identities=11% Similarity=0.032 Sum_probs=53.5
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|+....|++++. +-|..+++|+=+..|+.+.-... ....+.. .. .+.+..+|++|
T Consensus 275 pG~m~~pH~hp~A-~Ei~~V~~G~~~v~vv~~~g~~~---~~~~~~~---------------~~-----~r~~~~~l~~G 330 (434)
T 2ea7_A 275 EGALLLPHYSSKA-IVIMVINEGEAKIELVGLSDQQQ---QKQQEES---------------LE-----VQRYRAELSED 330 (434)
T ss_dssp TTEEEEEEEESSC-EEEEEEEESCEEEEEEEEEECCC---CTTSCCC---------------EE-----EEEEEEEECTT
T ss_pred CCeeeccEEcCCC-CEEEEEEeeEEEEEEEecCcccc---ccccccC---------------cc-----eEEEEEEecCC
Confidence 4778899999986 58999999999999987642110 0000000 00 12467799999
Q ss_pred CEEEeCCCCeeeeeecCc
Q 042108 379 EVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~~ 396 (406)
|+++||.|+.|...|.++
T Consensus 331 dv~vvP~g~~h~~~n~~~ 348 (434)
T 2ea7_A 331 DVFVIPAAYPVAINATSN 348 (434)
T ss_dssp CEEEECTTCCEEEEESSS
T ss_pred cEEEECCCCeEEEEcCCC
Confidence 999999999999999965
No 65
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=94.27 E-value=0.14 Score=44.87 Aligned_cols=77 Identities=13% Similarity=0.155 Sum_probs=54.8
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
|++.=++|.+|+.|-+.. +..++.+++|+=+-..|-+.... + . ..-+
T Consensus 72 ~~l~W~PGq~S~iHdH~~-s~~~~~VL~G~l~e~~y~~~~~~----~----------------------~------~~~~ 118 (171)
T 3eqe_A 72 IVINIPPNKETTVHDHGQ-SIGCAMVLEGKLLNSIYRSTGEH----A----------------------E------LSNS 118 (171)
T ss_dssp EEEEECTTCBCCEECCTT-CEEEEEEEESEEEEEEEEECSSS----E----------------------E------EEEE
T ss_pred EEEEECCCCCcccccCCC-ceEEEEEEeeeEEEEEeecCCCc----e----------------------e------ecce
Confidence 444446799999998765 34788899999887766532100 0 0 1146
Q ss_pred EEEcCCCEEEeCCCCeeeeeecCccEEEee
Q 042108 373 CICKAGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
.++.+||+.+.|.+..|.|.|..+..||+.
T Consensus 119 ~~l~~G~~~~~~~~~iH~V~N~~~~~aVSl 148 (171)
T 3eqe_A 119 YFVHEGECLISTKGLIHKMSNPTSERMVSL 148 (171)
T ss_dssp EEEETTCEEEECTTCEEEEECCSSSCEEEE
T ss_pred EEeCCCcEEEeCCCCEEEEECCCCCCEEEE
Confidence 789999999999999999999876555543
No 66
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=94.09 E-value=0.18 Score=40.41 Aligned_cols=57 Identities=28% Similarity=0.393 Sum_probs=43.7
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE-EEc
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC-ICK 376 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~-vl~ 376 (406)
++|...+.|.+... -+..+++|+-.+.+ . + . .. .++
T Consensus 35 ~pg~~~~~H~H~~~--e~~~Vl~G~~~~~i------~-------~--------------------------~--~~~~l~ 71 (117)
T 2b8m_A 35 PRGEQMPKHYSNSY--VHLIIIKGEMTLTL------E-------D--------------------------Q--EPHNYK 71 (117)
T ss_dssp ETTCBCCCEECSSC--EEEEEEESEEEEEE------T-------T--------------------------S--CCEEEE
T ss_pred CCCCcCCCEeCCCc--EEEEEEeCEEEEEE------C-------C--------------------------E--EEEEeC
Confidence 45666788988765 78889999876665 0 0 1 23 789
Q ss_pred CCCEEEeCCCCeeeeeecCcc
Q 042108 377 AGEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 377 pGD~LfIP~gWwH~V~nl~~s 397 (406)
|||+++||+|-.|...|.++.
T Consensus 72 ~Gd~i~ip~~~~H~~~~~~~~ 92 (117)
T 2b8m_A 72 EGNIVYVPFNVKMLIQNINSD 92 (117)
T ss_dssp TTCEEEECTTCEEEEECCSSS
T ss_pred CCCEEEECCCCcEEeEcCCCC
Confidence 999999999999999998764
No 67
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=94.06 E-value=0.25 Score=42.80 Aligned_cols=55 Identities=9% Similarity=0.199 Sum_probs=43.7
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..+++|.+... -+..+++|+=.+.+ ..-..++++
T Consensus 64 ~pG~~~~~H~H~~~--E~~~Vl~G~~~~~i-----------------------------------------~~~~~~l~~ 100 (167)
T 3ibm_A 64 EPGGYTTLERHEHT--HVVMVVRGHAEVVL-----------------------------------------DDRVEPLTP 100 (167)
T ss_dssp CTTCBCCCBBCSSC--EEEEEEESEEEEEE-----------------------------------------TTEEEEECT
T ss_pred CCCCCCCCccCCCc--EEEEEEeCEEEEEE-----------------------------------------CCEEEEECC
Confidence 56777888988765 78888998865544 013678999
Q ss_pred CCEEEeCCCCeeeeeecC
Q 042108 378 GEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~ 395 (406)
||++|||+|-+|.+.|.+
T Consensus 101 Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 101 LDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp TCEEEECTTCCEEEEEES
T ss_pred CCEEEECCCCcEEEEeCC
Confidence 999999999999999987
No 68
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=94.05 E-value=0.43 Score=40.71 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=47.9
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..++.|.+... -+..+++|+=.+.+-..+... . ...-+.++++
T Consensus 49 ~pg~~~~~H~H~~~--E~~~Vl~G~~~~~~~~~~~~~----~----------------------------~~~~~~~l~~ 94 (163)
T 1lr5_A 49 SPGQRTPIHRHSCE--EVFTVLKGKGTLLMGSSSLKY----P----------------------------GQPQEIPFFQ 94 (163)
T ss_dssp CTTCBCCEEEESSC--EEEEEEECCEEEEECCSSSSS----C----------------------------CSCEEEEECT
T ss_pred CCCCcCCCeECCCC--eEEEEEeCEEEEEECCccccc----c----------------------------CccEEEEeCC
Confidence 45777889999765 689999999877763221100 0 1124779999
Q ss_pred CCEEEeCCCCeeeeeecC
Q 042108 378 GEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~ 395 (406)
||+++||+|-.|.+.|.+
T Consensus 95 Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 95 NTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp TEEEEECTTCCEEEECCC
T ss_pred CCEEEECCCCcEEeEeCC
Confidence 999999999999999986
No 69
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=94.04 E-value=0.058 Score=53.07 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=46.2
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
++..=++|..++.|.+... .++.+|.|+=.++.. ..-+
T Consensus 106 ~~~~l~PG~~~~~HrH~~~--ev~~VleG~G~~~~v----------------------------------------dG~~ 143 (368)
T 3nw4_A 106 AIQYLGPRETAPEHRHSQN--AFRFVVEGEGVWTVV----------------------------------------NGDP 143 (368)
T ss_dssp EEEEECTTCEEEEEEESSC--EEEECSSCEEEEEEE----------------------------------------TTEE
T ss_pred EEEEECCCCccCceecccc--eEEEEEecceEEEEE----------------------------------------CCEE
Confidence 3334456788888998765 788888887533321 1147
Q ss_pred EEEcCCCEEEeCCCCeeeeeecCc
Q 042108 373 CICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+.+++||+++||+|.||...|.++
T Consensus 144 ~~~~~GD~v~iP~g~~H~~~N~gd 167 (368)
T 3nw4_A 144 VRMSRGDLLLTPGWCFHGHMNDTD 167 (368)
T ss_dssp EEEETTCEEEECTTCCEEEEECSS
T ss_pred EEEeCCCEEEECCCCcEEeEeCCC
Confidence 789999999999999999999754
No 70
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=93.90 E-value=0.11 Score=42.02 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=42.1
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...++|.++.. .-+..+++|+=.+.+ .+ .-+..+++
T Consensus 47 ~pg~~~~~H~H~~~-~e~~~Vl~G~~~~~~-------------~~---------------------------~~~~~l~~ 85 (125)
T 3h8u_A 47 HPGQEIASHVHPHG-QDTWTVISGEAEYHQ-------------GN---------------------------GIVTHLKA 85 (125)
T ss_dssp CTTCEECCC-CTTC-EEEEEEEECEEEEEC-------------ST---------------------------TCEEEEET
T ss_pred CCCCcCCcccCCCC-eEEEEEEEeEEEEEE-------------CC---------------------------CeEEEeCC
Confidence 55777889988752 256778999855432 00 02668999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-+|.+.|.++
T Consensus 86 Gd~~~i~~~~~H~~~n~~~ 104 (125)
T 3h8u_A 86 GDIAIAKPGQVHGAMNSGP 104 (125)
T ss_dssp TEEEEECTTCCCEEEECSS
T ss_pred CCEEEECCCCEEEeEeCCC
Confidence 9999999999999999865
No 71
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=93.89 E-value=0.19 Score=45.67 Aligned_cols=63 Identities=5% Similarity=-0.042 Sum_probs=51.2
Q ss_pred ccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEc
Q 042108 297 GPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICK 376 (406)
Q Consensus 297 G~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~ 376 (406)
=.+|+..+.|..+.+ .+..++.|+=.+.+ . .-+.+++
T Consensus 44 ~~~G~~~~~h~h~~~--~~~~Vl~G~~~~~i------~-----------------------------------~~~~~l~ 80 (227)
T 3rns_A 44 LAKDEEITAEAMLGN--RYYYCFNGNGEIFI------E-----------------------------------NNKKTIS 80 (227)
T ss_dssp ECTTCEEEECSCSSC--EEEEEEESEEEEEE------S-----------------------------------SCEEEEE
T ss_pred ECCCCccCccccCCC--EEEEEEeCEEEEEE------C-----------------------------------CEEEEEC
Confidence 356888889998877 89999999977665 0 0256899
Q ss_pred CCCEEEeCCCCeeeeeecCccEEEee
Q 042108 377 AGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 377 pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
|||.+|||+|-.|.+.+.+++.-+..
T Consensus 81 ~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 81 NGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp TTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred CCCEEEECCCCCEEEEECCCcEEEEE
Confidence 99999999999999999998776643
No 72
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=93.87 E-value=0.31 Score=37.38 Aligned_cols=57 Identities=21% Similarity=0.199 Sum_probs=42.3
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|.++.. .-+..+++|+=...+ . .-...+++
T Consensus 36 ~pg~~~~~H~H~~~-~e~~~v~~G~~~~~~------~-----------------------------------~~~~~l~~ 73 (105)
T 1v70_A 36 LPGQAQKVHVHEGS-DKVYYALEGEVVVRV------G-----------------------------------EEEALLAP 73 (105)
T ss_dssp CTTCEEEEECCSSC-EEEEEEEESCEEEEE------T-----------------------------------TEEEEECT
T ss_pred CCCCcCCccCCCCC-cEEEEEEeCEEEEEE------C-----------------------------------CEEEEeCC
Confidence 45666788887642 147788888765544 0 02568999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-.|.+.|.++
T Consensus 74 Gd~~~ip~~~~H~~~~~~~ 92 (105)
T 1v70_A 74 GMAAFAPAGAPHGVRNESA 92 (105)
T ss_dssp TCEEEECTTSCEEEECCSS
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999854
No 73
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=93.87 E-value=0.26 Score=48.44 Aligned_cols=64 Identities=11% Similarity=0.044 Sum_probs=49.9
Q ss_pred ccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEc
Q 042108 297 GPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICK 376 (406)
Q Consensus 297 G~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~ 376 (406)
=++|..|..|..... .++.++.|+=+.++ ..-.+..+
T Consensus 286 L~pG~~t~~hRht~s--~Vy~V~eG~G~~~I-----------------------------------------~~~~~~w~ 322 (368)
T 3nw4_A 286 LRAGTETATRNEVGS--TVFQVFEGAGAVVM-----------------------------------------NGETTKLE 322 (368)
T ss_dssp ECTTCBCCCEEESSC--EEEEEEESCEEEEE-----------------------------------------TTEEEEEC
T ss_pred ECCCCccCCeecccc--EEEEEEeCcEEEEE-----------------------------------------CCEEEEec
Confidence 367888888888765 77888888755444 01467899
Q ss_pred CCCEEEeCCCCeeeeeecCccEEEeee
Q 042108 377 AGEVIFVPNGWWHLVINLEESIAITQN 403 (406)
Q Consensus 377 pGD~LfIP~gWwH~V~nl~~sIavt~n 403 (406)
+||+++||++.||...|.++++-+..+
T Consensus 323 ~gD~fvvP~w~~h~~~n~~~a~Lf~~~ 349 (368)
T 3nw4_A 323 KGDMFVVPSWVPWSLQAETQFDLFRFS 349 (368)
T ss_dssp TTCEEEECTTCCEEEEESSSEEEEEEE
T ss_pred CCCEEEECCCCcEEEEeCCCEEEEEEe
Confidence 999999999999999999988776543
No 74
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=93.79 E-value=0.16 Score=44.16 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=42.5
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..+++|.+... -+..+++|+=...+ ..-+.++++
T Consensus 61 ~pG~~~~~H~H~~~--E~~~Vl~G~~~~~v-----------------------------------------~g~~~~l~~ 97 (166)
T 3jzv_A 61 GPGGHSTLERHQHA--HGVMILKGRGHAMV-----------------------------------------GRAVSAVAP 97 (166)
T ss_dssp EEEEECCCBBCSSC--EEEEEEEECEEEEE-----------------------------------------TTEEEEECT
T ss_pred CCCCccCceeCCCc--EEEEEEeCEEEEEE-----------------------------------------CCEEEEeCC
Confidence 45666778888765 67778888755443 013678999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|=+|.+.|..+
T Consensus 98 GD~i~ip~g~~H~~~n~~~ 116 (166)
T 3jzv_A 98 YDLVTIPGWSWHQFRAPAD 116 (166)
T ss_dssp TCEEEECTTCCEEEECCTT
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999754
No 75
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=93.77 E-value=0.081 Score=52.56 Aligned_cols=57 Identities=25% Similarity=0.332 Sum_probs=44.4
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..++.|.+... .++.+|.|+=.++.. ..-++.+++
T Consensus 131 ~PG~~~~~HrH~~~--ev~~IleG~G~~t~v----------------------------------------~G~~~~~~~ 168 (394)
T 3bu7_A 131 KAGERAGAHRHAAS--ALRFIMEGSGAYTIV----------------------------------------DGHKVELGA 168 (394)
T ss_dssp CTTCBCCCEEESSC--EEEEEEECSCEEEEE----------------------------------------TTEEEEECT
T ss_pred CCCCCcCCccCCcc--eEEEEEEeeEEEEEE----------------------------------------CCEEEEEcC
Confidence 56888899999776 788999987433221 114778999
Q ss_pred CCEEEeCCCCeeeeee-cCc
Q 042108 378 GEVIFVPNGWWHLVIN-LEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~n-l~~ 396 (406)
||++++|+|.||...| ..+
T Consensus 169 GD~i~~P~g~~H~~~N~~gd 188 (394)
T 3bu7_A 169 NDFVLTPNGTWHEHGILESG 188 (394)
T ss_dssp TCEEEECTTCCEEEEECTTC
T ss_pred CCEEEECcCCCEEEEcCCCC
Confidence 9999999999999999 643
No 76
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=93.76 E-value=0.12 Score=42.94 Aligned_cols=58 Identities=19% Similarity=0.171 Sum_probs=42.3
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..+++|.++.. -+..+++|+-.+.+.- ..-..+++|
T Consensus 47 ~pg~~~~~H~H~~~--e~~~vl~G~~~~~~~~---------------------------------------~~~~~~l~~ 85 (145)
T 3ht1_A 47 SPNGSTPPHFHEWE--HEIYVLEGSMGLVLPD---------------------------------------QGRTEEVGP 85 (145)
T ss_dssp EEEEECCCEECSSC--EEEEEEEECEEEEEGG---------------------------------------GTEEEEECT
T ss_pred CCCCcCCCccCCCc--eEEEEEEeEEEEEEeE---------------------------------------CCEEEEECC
Confidence 45666788888776 5567888875544100 013678999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-.|.+.|.++
T Consensus 86 Gd~~~ip~~~~H~~~~~~~ 104 (145)
T 3ht1_A 86 GEAIFIPRGEPHGFVTGPG 104 (145)
T ss_dssp TCEEEECTTCCBEEECCTT
T ss_pred CCEEEECCCCeEEeEcCCC
Confidence 9999999999999999865
No 77
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=93.72 E-value=0.022 Score=58.55 Aligned_cols=33 Identities=12% Similarity=0.373 Sum_probs=31.1
Q ss_pred cCCCHHHHHHHhcCC-CHHHHHHHHHHhHHHHHh
Q 042108 65 QTLTDELVIDVLGFL-DATQLGVLATVSKSFYVF 97 (406)
Q Consensus 65 ~~Lpdelll~il~~L-d~~~L~~l~~~~r~~y~~ 97 (406)
..||||++.+||+|| +.+++.+++.|||+|+..
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 359999999999999 899999999999999987
No 78
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=93.56 E-value=0.2 Score=39.33 Aligned_cols=57 Identities=18% Similarity=0.248 Sum_probs=41.8
Q ss_pred cCCCCCcce--ecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEE
Q 042108 298 PAGSGSSFH--MDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECIC 375 (406)
Q Consensus 298 ~~gs~t~~H--~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl 375 (406)
++|...+.| .++. ..-+..+++|+=.+.+ . .-...+
T Consensus 29 ~pg~~~~~h~~~H~~-~~e~~~vl~G~~~~~~------~-----------------------------------~~~~~l 66 (113)
T 2gu9_A 29 APGDREGGPDNRHRG-ADQWLFVVDGAGEAIV------D-----------------------------------GHTQAL 66 (113)
T ss_dssp CTTCEEECCCSSSCC-CEEEEEEEECCEEEEE------T-----------------------------------TEEEEE
T ss_pred CCCCccCCcccccCC-CcEEEEEEeCEEEEEE------C-----------------------------------CEEEEe
Confidence 456666667 6652 2268888998866654 0 025689
Q ss_pred cCCCEEEeCCCCeeeeeecCc
Q 042108 376 KAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 376 ~pGD~LfIP~gWwH~V~nl~~ 396 (406)
++||+++||+|-.|...|.++
T Consensus 67 ~~Gd~~~i~~~~~H~~~~~~~ 87 (113)
T 2gu9_A 67 QAGSLIAIERGQAHEIRNTGD 87 (113)
T ss_dssp CTTEEEEECTTCCEEEECCSS
T ss_pred CCCCEEEECCCCcEEeEcCCC
Confidence 999999999999999999854
No 79
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=93.49 E-value=0.34 Score=39.55 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=42.1
Q ss_pred eccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEE
Q 042108 296 IGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECIC 375 (406)
Q Consensus 296 iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl 375 (406)
.-.+|...++|. ..+ -+..+|+|+=+..+ + .-+.++
T Consensus 46 ~~~pG~~~~~H~-~~~--E~~~Vl~G~~~~~~---~--------------------------------------g~~~~l 81 (119)
T 3lwc_A 46 RYAPGQSLTETM-AVD--DVMIVLEGRLSVST---D--------------------------------------GETVTA 81 (119)
T ss_dssp EECTTCEEEEEC-SSE--EEEEEEEEEEEEEE---T--------------------------------------TEEEEE
T ss_pred EECCCCCcCccC-CCC--EEEEEEeCEEEEEE---C--------------------------------------CEEEEE
Confidence 334566777887 333 68999999866655 1 025689
Q ss_pred cCCCEEEeCCCCeeeeeecC
Q 042108 376 KAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 376 ~pGD~LfIP~gWwH~V~nl~ 395 (406)
+|||++|||+|-.|...|.+
T Consensus 82 ~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 82 GPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp CTTCEEEECTTCEEEEEEEE
T ss_pred CCCCEEEECCCCEEEEEcCC
Confidence 99999999999999999883
No 80
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=93.20 E-value=0.37 Score=42.35 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=22.3
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeec
Q 042108 371 IECICKAGEVIFVPNGWWHLVINL 394 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl 394 (406)
-+.+|+|||++|+|++-.|.+.|.
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEEES
T ss_pred ccEEECCCCEEEeCCCCceEEEec
Confidence 367899999999999999999998
No 81
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=93.15 E-value=0.47 Score=41.64 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=52.1
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
++....+|+.-.+|+.... .-+..+++|+=..+++.-... || .+ .+...
T Consensus 56 n~s~s~~GvlRG~H~h~~q-~klv~~v~G~v~dv~vD~R~~--------------Sp------------Tf----g~~~~ 104 (174)
T 3ejk_A 56 YFSEVLPRRVKAWKRHSLM-TQLFAVPVGCIHVVLYDGREK--------------SP------------TS----GRLAQ 104 (174)
T ss_dssp EEEEECBTCEEEEEEESSC-CEEEEEEESEEEEEEECCCTT--------------CT------------TT----TCEEE
T ss_pred EEEECCCCCEECcEecCCC-ceEEEEEeeEEEEEEEeCCCC--------------CC------------CC----CeEEE
Confidence 4556677877788888653 367888899988888653321 11 11 12357
Q ss_pred EEEc---CCCEEEeCCCCeeeeeecCc
Q 042108 373 CICK---AGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 373 ~vl~---pGD~LfIP~gWwH~V~nl~~ 396 (406)
++|. ++-.||||.|+||...++++
T Consensus 105 v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 105 VTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred EEECCccCceEEEeCCCcEEEEEEccC
Confidence 7787 67899999999999999976
No 82
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=93.13 E-value=0.098 Score=48.40 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=49.0
Q ss_pred eccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEE
Q 042108 296 IGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECIC 375 (406)
Q Consensus 296 iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl 375 (406)
.-++|.+.+.|+++.. .=+..+++|+=.+.+ +-. -|+..++....++. - ....+..++
T Consensus 49 ~~~PG~~~~~H~H~~~-~E~~yVLeG~~~~~v-~~~-----~~~~~~~~~~~~~~------------~---~~~~~~~~l 106 (239)
T 2xlg_A 49 QIPPGGGPMPHIHYFI-NEWFWTPEGGIELFH-STK-----QYPNMDELPVVGGA------------G---RGDLYSIQS 106 (239)
T ss_dssp EECTTCSCCSEEESSE-EEEEEETTCCCEEEE-EEE-----ECCCTTSCCSTTTT------------C---CEEEEEEEC
T ss_pred EECCCCcCCCeECCCc-cEEEEEEEeEEEEEE-Eec-----ccccCCCccccccc------------c---cCceeEEEE
Confidence 3456778889988743 247888999877766 100 01100000000000 0 012357899
Q ss_pred cCCCEEEeCCCCeeeeeecCc
Q 042108 376 KAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 376 ~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+|||++|||+|-.|...|.++
T Consensus 107 ~~GD~i~iP~g~~H~~~N~~~ 127 (239)
T 2xlg_A 107 EPKQLIYSPNHYMHGFVNPTD 127 (239)
T ss_dssp CTTEEEEECTTEEEEEECCSS
T ss_pred CCCCEEEECCCCCEEEEeCCC
Confidence 999999999999999999875
No 83
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=93.11 E-value=0.37 Score=38.99 Aligned_cols=55 Identities=20% Similarity=0.200 Sum_probs=42.4
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCC
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAG 378 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pG 378 (406)
+|...+.|.+... -+..+++|+-.+.+ . .-+..+++|
T Consensus 43 pg~~~~~H~H~~~--Ei~~v~~G~~~~~i------~-----------------------------------~~~~~l~~G 79 (128)
T 4i4a_A 43 PETKSFRHSHNEY--ELFIVIQGNAIIRI------N-----------------------------------DEDFPVTKG 79 (128)
T ss_dssp TTEECCCBCCSSE--EEEEEEESEEEEEE------T-----------------------------------TEEEEEETT
T ss_pred CCCccCCEecCCe--EEEEEEeCEEEEEE------C-----------------------------------CEEEEECCC
Confidence 4556778888554 68888898866654 0 136689999
Q ss_pred CEEEeCCCCeeeeeecCc
Q 042108 379 EVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 379 D~LfIP~gWwH~V~nl~~ 396 (406)
|+++||+|=.|.+.|.++
T Consensus 80 d~~~i~~~~~H~~~~~~~ 97 (128)
T 4i4a_A 80 DLIIIPLDSEHHVINNNQ 97 (128)
T ss_dssp CEEEECTTCCEEEEECSS
T ss_pred cEEEECCCCcEEeEeCCC
Confidence 999999999999999743
No 84
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=93.00 E-value=0.4 Score=45.71 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=46.0
Q ss_pred eccCCCCCcceecC-CCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEE
Q 042108 296 IGPAGSGSSFHMDP-NSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECI 374 (406)
Q Consensus 296 iG~~gs~t~~H~D~-~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~v 374 (406)
-.++|...++|.+. .. -+..++.|+=++.+ . .-..+
T Consensus 52 ~~~pg~~~~~h~H~~~~--e~~~Vl~G~~~~~~------~-----------------------------------~~~~~ 88 (337)
T 1y3t_A 52 SGGKGDAFPLHVHKDTH--EGILVLDGKLELTL------D-----------------------------------GERYL 88 (337)
T ss_dssp EECTTCEEEEEECTTCC--EEEEEEESCEEEEE------T-----------------------------------TEEEE
T ss_pred EeCCCCCCCceeCCCce--EEEEEEECEEEEEE------C-----------------------------------CEEEE
Confidence 34567778889887 44 78999999876654 0 02568
Q ss_pred EcCCCEEEeCCCCeeeeeecCcc
Q 042108 375 CKAGEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 375 l~pGD~LfIP~gWwH~V~nl~~s 397 (406)
|++||++|||+|-+|...|.++.
T Consensus 89 l~~Gd~~~~p~~~~H~~~n~~~~ 111 (337)
T 1y3t_A 89 LISGDYANIPAGTPHSYRMQSHR 111 (337)
T ss_dssp ECTTCEEEECTTCCEEEEECSTT
T ss_pred ECCCCEEEECCCCcEEEEECCCC
Confidence 99999999999999999998763
No 85
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=92.77 E-value=0.16 Score=50.80 Aligned_cols=63 Identities=14% Similarity=0.079 Sum_probs=47.9
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+.+.| |+....| .+. .+-|..+++|+=+..++-|+. ..+
T Consensus 53 ~~~l~P-Gg~~~pH-h~~-a~E~~yVl~G~g~v~~v~~~~-------------------------------------~~~ 92 (416)
T 1uij_A 53 QFQSKP-NTILLPH-HAD-ADFLLFVLSGRAILTLVNNDD-------------------------------------RDS 92 (416)
T ss_dssp EEEECT-TEEEEEE-EES-EEEEEEEEESCEEEEEECSSC-------------------------------------EEE
T ss_pred EEEecc-CcCcccc-cCC-CceEEEEEeeEEEEEEEECCC-------------------------------------CeE
Confidence 444555 6677888 433 347999999998888765521 135
Q ss_pred EEEcCCCEEEeCCCCeeeeeecC
Q 042108 373 CICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
..+++||+++||+|..|.+.|.+
T Consensus 93 ~~l~~GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 93 YNLHPGDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp EEECTTEEEEECTTCEEEEEECC
T ss_pred EEecCCCEEEECCCCeEEEEecC
Confidence 68999999999999999999983
No 86
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=92.68 E-value=0.16 Score=49.58 Aligned_cols=57 Identities=21% Similarity=0.269 Sum_probs=41.4
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..++.|.+... .+..+++|+=.+..+ ..-+..+++
T Consensus 108 ~PG~~~~~H~H~~~--e~~yVl~G~g~~t~v----------------------------------------~g~~~~l~~ 145 (354)
T 2d40_A 108 MPGEVAPSHRHNQS--ALRFIVEGKGAFTAV----------------------------------------DGERTPMNE 145 (354)
T ss_dssp CTTCEEEEEEESSC--EEEEEEECSSCEEEE----------------------------------------TTEEEECCT
T ss_pred CCCCCcCCeecCcc--eEEEEEEEEEEEEEE----------------------------------------CCEEEEEcC
Confidence 45666777887655 788888886433111 013678999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||++|||+|.||...|.++
T Consensus 146 GD~~~iP~g~~H~~~n~~~ 164 (354)
T 2d40_A 146 GDFILTPQWRWHDHGNPGD 164 (354)
T ss_dssp TCEEEECTTSCEEEECCSS
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999854
No 87
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=92.57 E-value=0.22 Score=48.91 Aligned_cols=62 Identities=29% Similarity=0.530 Sum_probs=46.5
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|.....|.++.. .-+..+++|+=+..+..++ + ...+.++++
T Consensus 265 ~pG~~~~~h~H~~~-~E~~~Vl~G~~~~~i~~~~-----------g-------------------------~~~~~~l~~ 307 (385)
T 1j58_A 265 EPGAMRELHWHPNT-HEWQYYISGKARMTVFASD-----------G-------------------------HARTFNYQA 307 (385)
T ss_dssp CTTCEEEEEECSSS-CEEEEEEESEEEEEEEEET-----------T-------------------------EEEEEEEES
T ss_pred CCCcccCceeCCCC-CEEEEEEeCeEEEEEEcCC-----------C-------------------------cEEEEEEcC
Confidence 56777778988761 2789999999777774211 0 013678999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||++|||+|.+|.+.|..+
T Consensus 308 GD~~~ip~~~~H~~~n~~~ 326 (385)
T 1j58_A 308 GDVGYVPFAMGHYVENIGD 326 (385)
T ss_dssp SCEEEECTTCBEEEEECSS
T ss_pred CCEEEECCCCeEEEEECCC
Confidence 9999999999999999854
No 88
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=92.54 E-value=0.22 Score=50.15 Aligned_cols=63 Identities=16% Similarity=0.171 Sum_probs=47.7
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+-+. +|+....| .++ ..-|..+++|+=+..++-|+. ...
T Consensus 65 ~~~l~-PGg~~~pH-h~~-a~Ei~yVl~G~g~v~~v~~~~-------------------------------------~~~ 104 (434)
T 2ea7_A 65 EFKSK-PNTLLLPH-HAD-ADFLLVVLNGTAVLTLVNPDS-------------------------------------RDS 104 (434)
T ss_dssp EEEEC-TTEEEEEE-EES-EEEEEEEEESEEEEEEECSSC-------------------------------------EEE
T ss_pred EEEec-CCcCccCc-cCC-CceEEEEEecEEEEEEEeCCC-------------------------------------CEE
Confidence 34454 46777888 443 347999999998887764321 136
Q ss_pred EEEcCCCEEEeCCCCeeeeeecC
Q 042108 373 CICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
..+++||+++||+|..|.+.|.+
T Consensus 105 ~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 105 YILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEEETTEEEEECTTCEEEEEECC
T ss_pred EEeCCCCEEEECCCccEEEEeCC
Confidence 68999999999999999999996
No 89
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=92.53 E-value=0.57 Score=37.83 Aligned_cols=24 Identities=8% Similarity=0.005 Sum_probs=22.1
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecC
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
...++|||+++||+|-.|...|..
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEEEBT
T ss_pred EEEeCCCCEEEECCCCcEEEEcCC
Confidence 568999999999999999999984
No 90
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=92.43 E-value=0.4 Score=43.41 Aligned_cols=78 Identities=17% Similarity=0.101 Sum_probs=54.6
Q ss_pred ceeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcE
Q 042108 292 RWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPI 371 (406)
Q Consensus 292 ~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~ 371 (406)
.++++=++|.+|+.|=+. +..+..+++|.=+=..|..... +. +. ...-
T Consensus 75 v~~l~W~PGq~spiHDH~--swg~~~Vl~G~l~e~~y~~~~~---------g~----~~-----------------~~~~ 122 (211)
T 3uss_A 75 VVSFVWGPGQITPVHDHR--VWGLIGMLRGAEYSQPYAFDAG---------GR----PH-----------------PSGA 122 (211)
T ss_dssp EEEEEECTTCBCCSBCCS--SCEEEEEEESCEEEEEEEECTT---------SC----EE-----------------ECSC
T ss_pred EEEEEECCCCcCCCCCCC--eeEEEEeeeceEEEEEeeeCCC---------CC----cc-----------------cccc
Confidence 466666889999999887 5699999999877666543221 10 00 0112
Q ss_pred EEEEcCCCEEEeCCC--CeeeeeecC-ccEEEe
Q 042108 372 ECICKAGEVIFVPNG--WWHLVINLE-ESIAIT 401 (406)
Q Consensus 372 ~~vl~pGD~LfIP~g--WwH~V~nl~-~sIavt 401 (406)
+.++.+||+.+++.+ ..|.|.|.. +..||+
T Consensus 123 ~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avS 155 (211)
T 3uss_A 123 RRRLEPGEVEALSPRIGDVHQVSNAFSDRTSIS 155 (211)
T ss_dssp CEEECTTCEEEEBTTTBCCEEEEESCSSSCEEE
T ss_pred eEEecCCCEEEECCCCCCEEEEccCCCCCCEEE
Confidence 468999999999876 999999983 444444
No 91
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=92.21 E-value=0.13 Score=44.27 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=27.6
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCccEEEeee
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEESIAITQN 403 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~n 403 (406)
-..+++|||++|||+|..|...|.+++..+...
T Consensus 102 ~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V~ 134 (151)
T 4axo_A 102 RKVSASSGELIFIPKGSKIQFSVPDYARFIYVT 134 (151)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred EEEEEcCCCEEEECCCCEEEEEeCCCEEEEEEE
Confidence 367899999999999999999998776665543
No 92
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=92.14 E-value=0.71 Score=39.20 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=41.8
Q ss_pred cCCC-CCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEc
Q 042108 298 PAGS-GSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICK 376 (406)
Q Consensus 298 ~~gs-~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~ 376 (406)
++|. ..++|+++.. .-+..+++|+=.+.+ ..-+.+++
T Consensus 54 ~pg~~~~~~H~H~~~-~E~~~Vl~G~~~~~~-----------------------------------------~~~~~~l~ 91 (162)
T 3l2h_A 54 EPGKESTEYHLHHYE-EEAVYVLSGKGTLTM-----------------------------------------ENDQYPIA 91 (162)
T ss_dssp CTTCBSSSSBEESSC-CEEEEEEESCEEEEE-----------------------------------------TTEEEEEC
T ss_pred CCCCcCCCCccCCCC-CEEEEEEEEEEEEEE-----------------------------------------CCEEEEeC
Confidence 3455 5788888432 268889998865543 01367899
Q ss_pred CCCEEEeCCC-CeeeeeecCc
Q 042108 377 AGEVIFVPNG-WWHLVINLEE 396 (406)
Q Consensus 377 pGD~LfIP~g-WwH~V~nl~~ 396 (406)
+||+++||+| -.|.+.|..+
T Consensus 92 ~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 92 PGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp TTCEEEECTTSCCEEEECCSS
T ss_pred CCCEEEECCCCceEEeEeCCC
Confidence 9999999997 9999999754
No 93
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=92.08 E-value=0.94 Score=40.55 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=55.4
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
|++.=++|.+|+.|-+.+ +..+..+++|+=+-..|-..... .. ++ ...-+
T Consensus 73 ~ll~W~PGq~SpiHDH~~-s~g~i~VL~G~l~e~~y~~~~~~---------~~---~l-----------------~~~~~ 122 (200)
T 3eln_A 73 MILCWGEGHGSSIHDHTD-SHCFLKLLQGNLKETLFDWPDKK---------SN---EM-----------------IKKSE 122 (200)
T ss_dssp EEEEECTTCBCCEECCTT-CEEEEEEEESCEEEEEECCCCSS---------CC---CC-----------------CEEEE
T ss_pred EEEEECCCCcCCCccCCC-ceEEEEEEeeeEEEEEeecCCCC---------cc---cc-----------------cccce
Confidence 444447899999998875 45899999999887776532211 00 00 12247
Q ss_pred EEEcCCCEEEe-CCCCeeeeeecC-ccEEEe
Q 042108 373 CICKAGEVIFV-PNGWWHLVINLE-ESIAIT 401 (406)
Q Consensus 373 ~vl~pGD~LfI-P~gWwH~V~nl~-~sIavt 401 (406)
.++.|||+.|+ |.+=.|.|.|.. +..||+
T Consensus 123 ~~l~~G~v~~~~~~~giH~V~N~s~~~~avS 153 (200)
T 3eln_A 123 RTLRENQCAYINDSIGLHRVENVSHTEPAVS 153 (200)
T ss_dssp EEECTTCEEEECTTTCEEEEECCCSSCCEEE
T ss_pred EEeCCCCEEEecCCCcEEEEECCCCCCCEEE
Confidence 89999999999 877799999986 434444
No 94
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=92.05 E-value=0.7 Score=38.30 Aligned_cols=62 Identities=13% Similarity=0.313 Sum_probs=47.8
Q ss_pred CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCCCCeee
Q 042108 311 STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPNGWWHL 390 (406)
Q Consensus 311 ~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~gWwH~ 390 (406)
+|..-+.+++|+=++..|..+... + ..-+....+|+..+||++-||.
T Consensus 38 Gtwg~l~VL~G~L~f~~~~e~g~~----------~-----------------------~~~~~l~~~~~~~~i~Pq~wH~ 84 (127)
T 3bb6_A 38 GVYPRLSVMHGAVKYLGYADEHSA----------E-----------------------PDQVILIEAGQFAVFPPEKWHN 84 (127)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCS----------S-----------------------CSEEEEEEBTBEEECCSSCEEE
T ss_pred CEEEEEEEEEeEEEEEEECCCCCc----------c-----------------------eeEEEEeCCCCceEECCCCcEE
Confidence 455788999999888876543321 0 1136778899999999999999
Q ss_pred eeecCccEEEeeecc
Q 042108 391 VINLEESIAITQNYV 405 (406)
Q Consensus 391 V~nl~~sIavt~nFv 405 (406)
|..+++.+.+..+|.
T Consensus 85 Ve~lsdd~~f~leFy 99 (127)
T 3bb6_A 85 IEAMTDDTYFNIDFF 99 (127)
T ss_dssp EEESSTTCEEEEEEE
T ss_pred EEEcCCCEEEEEEEE
Confidence 999988888888773
No 95
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=91.84 E-value=0.5 Score=38.92 Aligned_cols=62 Identities=23% Similarity=0.228 Sum_probs=44.3
Q ss_pred cCCCCCcceecCC-CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEc
Q 042108 298 PAGSGSSFHMDPN-STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICK 376 (406)
Q Consensus 298 ~~gs~t~~H~D~~-~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~ 376 (406)
++|...+.|.... . -+..+++|+=...+ ..-+.+|+
T Consensus 65 ~pg~~~~~H~H~~~~--E~~~Vl~G~~~~~i-----------------------------------------~~~~~~l~ 101 (133)
T 1o4t_A 65 PPGSSVGLHKHEGEF--EIYYILLGEGVFHD-----------------------------------------NGKDVPIK 101 (133)
T ss_dssp CTTCEEEEEECCSEE--EEEEEEESEEEEEE-----------------------------------------TTEEEEEE
T ss_pred CCCCccCceECCCcc--EEEEEEeCEEEEEE-----------------------------------------CCEEEEeC
Confidence 4556667888753 3 57888888865554 01366899
Q ss_pred CCCEEEeCCCCeeeeeecCc--cEEEee
Q 042108 377 AGEVIFVPNGWWHLVINLEE--SIAITQ 402 (406)
Q Consensus 377 pGD~LfIP~gWwH~V~nl~~--sIavt~ 402 (406)
|||++++|++-.|...|..+ +..+..
T Consensus 102 ~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 102 AGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp TTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 99999999999999999854 444433
No 96
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=91.83 E-value=0.77 Score=39.39 Aligned_cols=25 Identities=24% Similarity=0.292 Sum_probs=22.8
Q ss_pred EEEEcCCCEEEeCCC--CeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNG--WWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~g--WwH~V~nl~~ 396 (406)
+.+|++||+++||+| -.|.+.|..+
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEECCSS
T ss_pred EEEeCCCCEEEECCCCCcceEEEECCC
Confidence 678999999999999 9999999754
No 97
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=91.45 E-value=0.48 Score=44.54 Aligned_cols=73 Identities=11% Similarity=0.287 Sum_probs=58.0
Q ss_pred CcceeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCC
Q 042108 290 DYRWVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKR 369 (406)
Q Consensus 290 ~~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~ 369 (406)
+..-+.+|+++..+.+|+|..+ =|+.|++|.=+..+... ..
T Consensus 31 ~~~V~~vgGpN~R~d~H~~~~d--E~FyqlkG~m~l~~~d~-------------------------------------g~ 71 (286)
T 2qnk_A 31 QLKVMFIGGPNTRKDYHIEEGE--EVFYQLEGDMVLRVLEQ-------------------------------------GK 71 (286)
T ss_dssp SEEEEEECSCBCCCCEEECSSC--EEEEEEESCEEEEEEET-------------------------------------TE
T ss_pred cEEEEEEeCCCcCccCcCCCCC--eEEEEEeCeEEEEEEeC-------------------------------------Cc
Confidence 3556789999999999977665 89999999866555310 01
Q ss_pred cEEEEEcCCCEEEeCCCCeeeeeecCccEEEe
Q 042108 370 PIECICKAGEVIFVPNGWWHLVINLEESIAIT 401 (406)
Q Consensus 370 ~~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt 401 (406)
...+++++||+..+|+|--|.-...++|+.+-
T Consensus 72 ~~~V~i~eGemfllP~gv~HsP~r~~et~gLv 103 (286)
T 2qnk_A 72 HRDVVIRQGEIFLLPARVPHSPQRFANTVGLV 103 (286)
T ss_dssp EEEEEECTTEEEEECTTCCEEEEECTTCEEEE
T ss_pred eeeEEECCCeEEEeCCCCCcCCcccCCeEEEE
Confidence 25789999999999999999998888888763
No 98
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=91.10 E-value=0.53 Score=42.67 Aligned_cols=59 Identities=24% Similarity=0.258 Sum_probs=44.2
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|.++.. .+..++.|+=...+ ..-...+++
T Consensus 161 ~~G~~~~~H~H~~~--e~~~Vl~G~~~~~i-----------------------------------------~g~~~~l~~ 197 (227)
T 3rns_A 161 WKGESLDPHKAPGD--ALVTVLDGEGKYYV-----------------------------------------DGKPFIVKK 197 (227)
T ss_dssp CTTCEEEEECCSSE--EEEEEEEEEEEEEE-----------------------------------------TTEEEEEET
T ss_pred CCCCccCCEECCCc--EEEEEEeEEEEEEE-----------------------------------------CCEEEEECC
Confidence 45666777877755 67788888755443 013678999
Q ss_pred CCEEEeCCCCeeeeee-cCccEE
Q 042108 378 GEVIFVPNGWWHLVIN-LEESIA 399 (406)
Q Consensus 378 GD~LfIP~gWwH~V~n-l~~sIa 399 (406)
||+++||+|-.|.+.| .+++..
T Consensus 198 Gd~i~ip~~~~H~~~~~~~~~~~ 220 (227)
T 3rns_A 198 GESAVLPANIPHAVEAETENFKM 220 (227)
T ss_dssp TEEEEECTTSCEEEECCSSCEEE
T ss_pred CCEEEECCCCcEEEEeCCCCEEE
Confidence 9999999999999999 877543
No 99
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=90.95 E-value=1 Score=42.86 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=42.9
Q ss_pred EeccCCCCCcceecCC-CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 295 IIGPAGSGSSFHMDPN-STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 295 ~iG~~gs~t~~H~D~~-~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
.+.++|...++|.++. . -+..+++|+=+..+ ..-..
T Consensus 223 ~~~p~g~~~~~h~H~~~~--e~~~vl~G~~~~~i-----------------------------------------~~~~~ 259 (337)
T 1y3t_A 223 SEGPKGDRIVDHYHEYHT--ETFYCLEGQMTMWT-----------------------------------------DGQEI 259 (337)
T ss_dssp EEECSCCCCCCEECSSCE--EEEEEEESCEEEEE-----------------------------------------TTEEE
T ss_pred EEcCCCCCCCCcCCCCCc--EEEEEEeCEEEEEE-----------------------------------------CCEEE
Confidence 3445566667777763 3 57777777755444 01367
Q ss_pred EEcCCCEEEeCCCCeeeeeecCc
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
.+++||+++||++-.|...|.++
T Consensus 260 ~l~~GD~~~ip~~~~H~~~n~~~ 282 (337)
T 1y3t_A 260 QLNPGDFLHVPANTVHSYRLDSH 282 (337)
T ss_dssp EECTTCEEEECTTCCEEEEECSS
T ss_pred EECCCCEEEECCCCeEEEEECCC
Confidence 89999999999999999999875
No 100
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=90.89 E-value=0.19 Score=38.74 Aligned_cols=29 Identities=28% Similarity=0.382 Sum_probs=24.8
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCccEEE
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEESIAI 400 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~sIav 400 (406)
..++++||+++||+|-.|.+.|.+++..+
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 56889999999999999999998765444
No 101
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=90.88 E-value=0.23 Score=39.36 Aligned_cols=26 Identities=19% Similarity=0.309 Sum_probs=23.4
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCcc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~s 397 (406)
..+|+|||+++||+|..|...|.++.
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n~~~~ 94 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKVLEPV 94 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCe
Confidence 56899999999999999999998764
No 102
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=90.81 E-value=1.2 Score=39.37 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=50.9
Q ss_pred ceeEeccCCCCCcceec-CCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCc
Q 042108 292 RWVIIGPAGSGSSFHMD-PNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRP 370 (406)
Q Consensus 292 ~~l~iG~~gs~t~~H~D-~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~ 370 (406)
.+...+.+|..-.+|+. |....-+..+++|+=.-+++.-.. .|| .+ .+.
T Consensus 50 ~n~S~s~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~--------------~Sp------------Tf----g~~ 99 (185)
T 1ep0_A 50 DNESMSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRK--------------NSD------------TY----GEW 99 (185)
T ss_dssp EEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCT--------------TCT------------TT----TCE
T ss_pred EEEEeCcCCeEecceecCCccccEEEEEeCCeEEEEEEECCC--------------CCC------------CC----CeE
Confidence 34556667777778887 322236788899984433332211 111 11 122
Q ss_pred EEEEEcC--CCEEEeCCCCeeeeeecCccEEEeeec
Q 042108 371 IECICKA--GEVIFVPNGWWHLVINLEESIAITQNY 404 (406)
Q Consensus 371 ~~~vl~p--GD~LfIP~gWwH~V~nl~~sIavt~nF 404 (406)
..++|.+ +..||||.|+||...++++. ++-..+
T Consensus 100 ~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 100 TGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp EEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred EEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 5666765 68999999999999999875 444443
No 103
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=90.48 E-value=1.2 Score=39.34 Aligned_cols=82 Identities=13% Similarity=0.039 Sum_probs=50.7
Q ss_pred ceeEeccCCCCCcceec-CCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCc
Q 042108 292 RWVIIGPAGSGSSFHMD-PNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRP 370 (406)
Q Consensus 292 ~~l~iG~~gs~t~~H~D-~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~ 370 (406)
.+...+.+|..-.+|+. |....-+..+++|+=.-+++.-.. .|| .+ .+.
T Consensus 51 ~n~S~s~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~--------------~Sp------------Tf----g~~ 100 (184)
T 2ixk_A 51 DNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRR--------------GSP------------TF----GQW 100 (184)
T ss_dssp EEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBT--------------TST------------TT----TCE
T ss_pred EEEEeCCCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCC--------------CCC------------CC----CeE
Confidence 34556667777778887 222236788899984433332111 111 11 122
Q ss_pred EEEEEcC--CCEEEeCCCCeeeeeecCccEEEeeec
Q 042108 371 IECICKA--GEVIFVPNGWWHLVINLEESIAITQNY 404 (406)
Q Consensus 371 ~~~vl~p--GD~LfIP~gWwH~V~nl~~sIavt~nF 404 (406)
..++|.+ +..||||.|+||...++++. ++-..+
T Consensus 101 ~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 101 VGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp EEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred EEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 5666665 68999999999999999875 444433
No 104
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=90.30 E-value=0.44 Score=43.72 Aligned_cols=30 Identities=30% Similarity=0.169 Sum_probs=24.9
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc--cEEEe
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE--SIAIT 401 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~--sIavt 401 (406)
+.+++|||+++||++-.|.+.|..+ +..+.
T Consensus 185 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 216 (243)
T 3h7j_A 185 TVEMKFGTAYFCEPREDHGAINRSEKESKSIN 216 (243)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 6689999999999999999999854 44443
No 105
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=90.22 E-value=0.88 Score=38.20 Aligned_cols=57 Identities=18% Similarity=0.256 Sum_probs=43.0
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|..... -+..+++|+=+..+ . .. ...+++|
T Consensus 56 ~pg~~~~~H~H~~~--E~~~Vl~G~~~~~~------~---------------------------------~~-~~~~l~~ 93 (147)
T 2f4p_A 56 EPGARTHWHSHPGG--QILIVTRGKGFYQE------R---------------------------------GK-PARILKK 93 (147)
T ss_dssp CTTCEECSEECTTC--EEEEEEEEEEEEEE------T---------------------------------TS-CCEEEET
T ss_pred CCCCccCceECCCc--eEEEEEeCEEEEEE------C---------------------------------CE-EEEEECC
Confidence 45666778988775 78888999866554 0 01 0257899
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||++=.|...|..+
T Consensus 94 Gd~i~ip~~~~H~~~n~~~ 112 (147)
T 2f4p_A 94 GDVVEIPPNVVHWHGAAPD 112 (147)
T ss_dssp TCEEEECTTCCEEEEEBTT
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999854
No 106
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=90.17 E-value=0.32 Score=39.01 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=25.2
Q ss_pred EEEcCCCEEEeCCCCeeeeeecCc---cEEEeee
Q 042108 373 CICKAGEVIFVPNGWWHLVINLEE---SIAITQN 403 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~~---sIavt~n 403 (406)
..|+|||++|||+|-.|.+.|.++ ++-+...
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~ 108 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVH 108 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEE
Confidence 589999999999999999999864 4444443
No 107
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=89.83 E-value=0.78 Score=41.99 Aligned_cols=61 Identities=18% Similarity=0.132 Sum_probs=45.7
Q ss_pred ccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEc
Q 042108 297 GPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICK 376 (406)
Q Consensus 297 G~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~ 376 (406)
=++|+..+.|.++.. -+..+++|+=.+.+ + .-..++.
T Consensus 41 ~~pg~~~~~H~H~~~--e~~~Vl~G~~~~~~---~--------------------------------------~~~~~l~ 77 (243)
T 3h7j_A 41 VPPHTNVEPHQHKEV--QIGMVVSGELMMTV---G--------------------------------------DVTRKMT 77 (243)
T ss_dssp ECTTEEEEEECCSSE--EEEEEEESEEEEEE---T--------------------------------------TEEEEEE
T ss_pred ECCCCccCCEECCCc--EEEEEEEeEEEEEE---C--------------------------------------CEEEEEC
Confidence 356777788888765 78888888755544 0 1366899
Q ss_pred CCCEEE-eCCCCeeeeeecCc--cEEE
Q 042108 377 AGEVIF-VPNGWWHLVINLEE--SIAI 400 (406)
Q Consensus 377 pGD~Lf-IP~gWwH~V~nl~~--sIav 400 (406)
|||.+| ||+|-+|.+.|.++ ++.+
T Consensus 78 ~Gd~i~~ip~~~~H~~~n~~~~~~~~l 104 (243)
T 3h7j_A 78 ALESAYIAPPHVPHGARNDTDQEVIAI 104 (243)
T ss_dssp TTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CCCEEEEcCCCCcEeeEeCCCCcEEEE
Confidence 999997 99999999999875 4444
No 108
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=89.77 E-value=0.37 Score=48.22 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=52.6
Q ss_pred CCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCC--CCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEc
Q 042108 299 AGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSS--DGAEVACPVSIMEWFMNFYGATKNWKKRPIECICK 376 (406)
Q Consensus 299 ~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~--d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~ 376 (406)
+|+-...|+.++. +-|..+++|+=+.-++.|...... --.. ++.+ -........ ..+.+...++
T Consensus 272 pgg~~~PH~~p~A-~ei~yV~~G~g~v~vv~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~l~ 337 (418)
T 3s7i_A 272 EGALMLPHFNSKA-MVIVVVNKGTGNLELVAVRKEQQQ-RGRREEEEDE-----------DEEEEGSNR-EVRRYTARLK 337 (418)
T ss_dssp TTEEEEEEEESSC-EEEEEEEECCEEEEEEEEEEC-------------------------------CCE-EEEEEEEEEC
T ss_pred CCceeCceecCCC-CEEEEEEeCeEEEEEEeCCCcccc-cccccccccc-----------ccccccccc-cceEEEeeeC
Confidence 4677788999986 479999999999999877542100 0000 0000 000000000 0133688999
Q ss_pred CCCEEEeCCCCeeeeeecCc
Q 042108 377 AGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 377 pGD~LfIP~gWwH~V~nl~~ 396 (406)
+||+++||.|+.|...|-++
T Consensus 338 ~GDV~vvP~G~~~~~~~~~~ 357 (418)
T 3s7i_A 338 EGDVFIMPAAHPVAINASSE 357 (418)
T ss_dssp TTCEEEECTTCCEEEEESSC
T ss_pred CCCEEEECCCCEEEEECCCC
Confidence 99999999999999998765
No 109
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=89.30 E-value=0.36 Score=37.70 Aligned_cols=28 Identities=18% Similarity=0.082 Sum_probs=24.7
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCccEE
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEESIA 399 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~sIa 399 (406)
+..+++||+++||+|-.|.+.|.+++..
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 102 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRAVTDMKV 102 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEESSSEEE
T ss_pred EEEECCCCEEEeCCCCcEEEEEcCCcEE
Confidence 5689999999999999999999987543
No 110
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=89.21 E-value=1.2 Score=40.36 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=46.6
Q ss_pred eccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEE
Q 042108 296 IGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECIC 375 (406)
Q Consensus 296 iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl 375 (406)
+=++|+..+.|.++.. -++.+|+|+=.|.+= ++ -..++
T Consensus 138 ~l~PG~~yP~HsHp~E--Eiy~VLsG~~e~~v~-------------~g---------------------------~~~~l 175 (217)
T 4b29_A 138 YWGPGLDYGWHEHLPE--ELYSVVSGRALFHLR-------------NA---------------------------PDLML 175 (217)
T ss_dssp EECSSCEEEEEECSSE--EEEEEEEECEEEEET-------------TS---------------------------CCEEE
T ss_pred EECCCCcCCCCCCCCc--eEEEEEeCCEEEEEC-------------CC---------------------------CEEec
Confidence 3356788899999876 788889988777761 00 14588
Q ss_pred cCCCEEEeCCCCeeeeeecCc
Q 042108 376 KAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 376 ~pGD~LfIP~gWwH~V~nl~~ 396 (406)
.|||++|+|+|=-|.+++.++
T Consensus 176 ~pGd~v~ipsgv~Ha~rt~de 196 (217)
T 4b29_A 176 EPGQTRFHPANAPHAMTTLTD 196 (217)
T ss_dssp CTTCEEEECTTCCEEEECCSS
T ss_pred CCCCEEEcCCCCceeEEECCc
Confidence 999999999999999998865
No 111
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=89.15 E-value=0.35 Score=40.67 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=45.4
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|.++. ..-+..+++|+=.+.+-. ... ...++.++.+
T Consensus 51 ~pg~~~~~H~H~~-~~E~~~Vl~G~~~~~i~~--~~~---------------------------------~~~~~~~l~~ 94 (148)
T 2oa2_A 51 QVGEDIGLEIHPH-LDQFLRVEEGRGLVQMGH--RQD---------------------------------NLHFQEEVFD 94 (148)
T ss_dssp CTTCBCCCBCCTT-CEEEEEEEESEEEEEEES--BTT---------------------------------BCCEEEEEET
T ss_pred CCCCccCceECCC-CcEEEEEEeCEEEEEECC--ccc---------------------------------cceeeEEECC
Confidence 4566777888763 226888999997776611 000 0125789999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-.|.+.|.++
T Consensus 95 Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 95 DYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp TCEEEECTTCEEEEEECSS
T ss_pred CCEEEECCCCcEEEEECCC
Confidence 9999999999999999854
No 112
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=88.81 E-value=0.78 Score=37.26 Aligned_cols=56 Identities=21% Similarity=0.094 Sum_probs=40.9
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|...+.|..... -+..+++|+=+..+ . .-+.+++|
T Consensus 56 ~pg~~~~~H~H~~~--e~~~Vl~G~~~~~i------~-----------------------------------~~~~~l~~ 92 (126)
T 1vj2_A 56 EPGGLIDRHSHPWE--HEIFVLKGKLTVLK------E-----------------------------------QGEETVEE 92 (126)
T ss_dssp EEEEEEEEECCSSC--EEEEEEESEEEEEC------S-----------------------------------SCEEEEET
T ss_pred CCCCcCCceeCCCc--EEEEEEEeEEEEEE------C-----------------------------------CEEEEECC
Confidence 34555667887654 67788888755443 0 02568999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||+++||+|-.|...|.++
T Consensus 93 Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 93 GFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp TEEEEECTTCCEEEECCSS
T ss_pred CCEEEECCCCcEEeEeCCC
Confidence 9999999999999999864
No 113
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=88.71 E-value=1.5 Score=36.94 Aligned_cols=64 Identities=16% Similarity=0.208 Sum_probs=44.7
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|..-.+|.+... .-++++++|+=.++|..... .-+++|..
T Consensus 43 ~~g~~RG~H~Hk~~-~q~li~l~Gs~~v~ldDg~~-------------------------------------~~~~~L~~ 84 (141)
T 2pa7_A 43 KGEEPRGFHAHKKL-EQVLVCLNGSCRVILDDGNI-------------------------------------IQEITLDS 84 (141)
T ss_dssp CSSCCEEEEEESSC-CEEEEEEESCEEEEEECSSC-------------------------------------EEEEEECC
T ss_pred CCCCEECcCcCCCc-eEEEEEEccEEEEEEECCcE-------------------------------------EEEEEECC
Confidence 36777778887664 37899999999998832110 02344443
Q ss_pred C-CEEEeCCCCeeeeeecCc-cEE
Q 042108 378 G-EVIFVPNGWWHLVINLEE-SIA 399 (406)
Q Consensus 378 G-D~LfIP~gWwH~V~nl~~-sIa 399 (406)
. -.|+||+|-||.+.++++ ||-
T Consensus 85 ~~~gL~IppgvWh~~~~~s~~avl 108 (141)
T 2pa7_A 85 PAVGLYVGPAVWHEMHDFSSDCVM 108 (141)
T ss_dssp TTEEEEECTTCEEEEECCCTTCEE
T ss_pred CCcEEEeCCCEEEEEEEcCCCeEE
Confidence 3 359999999999999976 443
No 114
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=88.71 E-value=1.1 Score=45.66 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=53.4
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+-|.| |+....|+.+.. -|..+++|+=...+.-|+... .|-..-...-.+- ...+ ++ ..-..
T Consensus 52 r~~l~P-ggl~~Ph~~~a~--ei~yV~~G~g~~g~v~pg~~e--t~~~~~~~~~~~~-------~~~~---~d--~~qk~ 114 (476)
T 1fxz_A 52 RCTLNR-NALRRPSYTNGP--QEIYIQQGKGIFGMIYPGCPS--TFEEPQQPQQRGQ-------SSRP---QD--RHQKI 114 (476)
T ss_dssp EEEECT-TEEEEEEEESSC--EEEEEEECCEEEEEECTTCCC--C------------------------------CCCCE
T ss_pred EEEEcC-CCEecceecCCc--eEEEEEecEEEEEEEcCCCcc--hhhcccccccccc-------cccc---cc--ccceE
Confidence 345555 667778887644 899999999999999887532 2211000000000 0000 00 11135
Q ss_pred EEEcCCCEEEeCCCCeeeeeecCc
Q 042108 373 CICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
..+++||+++||+|-.|...|.++
T Consensus 115 ~~l~~GDvi~iPaG~~h~~~N~G~ 138 (476)
T 1fxz_A 115 YNFREGDLIAVPTGVAWWMYNNED 138 (476)
T ss_dssp EEECTTEEEEECTTCEEEEEECSS
T ss_pred EEEeCCCEEEECCCCcEEEEeCCC
Confidence 689999999999999999999974
No 115
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=88.64 E-value=2.8 Score=37.60 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=49.5
Q ss_pred cceeEeccCCCCCcceecC--CCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCC
Q 042108 291 YRWVIIGPAGSGSSFHMDP--NSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKK 368 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~--~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~ 368 (406)
..+...+.+|..-.+|+.. ....=+..+++|+=.-+++.-.. .|| .+ .
T Consensus 48 Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~--------------~Sp------------Tf----G 97 (205)
T 1oi6_A 48 QTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRV--------------GSP------------TF----G 97 (205)
T ss_dssp EEEEEEECTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCB--------------TCT------------TT----T
T ss_pred EEEEEeCCCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCC--------------CCC------------CC----C
Confidence 3455566677777788774 23336788899984444433211 111 11 1
Q ss_pred CcEEEEEcC--CCEEEeCCCCeeeeeecCcc
Q 042108 369 RPIECICKA--GEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 369 ~~~~~vl~p--GD~LfIP~gWwH~V~nl~~s 397 (406)
+...++|.+ +..||||.|+||...++++.
T Consensus 98 ~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 98 QWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp CEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred eEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 235667776 58999999999999999875
No 116
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=88.44 E-value=0.84 Score=46.15 Aligned_cols=85 Identities=11% Similarity=0.027 Sum_probs=53.2
Q ss_pred eEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 294 VIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
+-|. +|+....|+... +-|..+++|+=...++-|+... .|-......-.+ ...+.+ .+-..-
T Consensus 68 ~~i~-pggl~~Ph~h~a--~ei~yVl~G~g~vg~v~p~~~~--tf~~~~~~~~~~--------~~~~~d-----~~q~~~ 129 (459)
T 2e9q_A 68 HTIR-PKGLLLPGFSNA--PKLIFVAQGFGIRGIAIPGCAE--TYQTDLRRSQSA--------GSAFKD-----QHQKIR 129 (459)
T ss_dssp EEEC-TTEEEEEEEESS--CEEEEEEECEEEEEECCTTCCC--CEEECCC---------------CCCE-----EECCCE
T ss_pred EEEc-CCCEecceecCC--ceEEEEEeeEEEEEEEeCCCcc--hhccchhhcccc--------cccccc-----ccceeE
Confidence 4454 466778888753 4899999999999998776432 231110000000 000000 011245
Q ss_pred EEcCCCEEEeCCCCeeeeeecCc
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
.+++||+++||+|--|...|.++
T Consensus 130 ~l~~GDv~~iPaG~~H~~~N~g~ 152 (459)
T 2e9q_A 130 PFREGDLLVVPAGVSHWMYNRGQ 152 (459)
T ss_dssp EEETTEEEEECTTCCEEEEECSS
T ss_pred EecCCCEEEECCCCCEEEEeCCC
Confidence 89999999999999999999974
No 117
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=88.29 E-value=0.55 Score=47.33 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=45.5
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
.+|+....| .+. ..-|..+++|+=+..++-|+. ..+..+++
T Consensus 94 ~Pgg~~~pH-h~~-a~E~~yVl~G~g~v~~v~~~~-------------------------------------~~~~~l~~ 134 (445)
T 2cav_A 94 KPNTLLLPH-HSD-SDLLVLVLEGQAILVLVNPDG-------------------------------------RDTYKLDQ 134 (445)
T ss_dssp CSSEEEEEE-EES-SEEEEEEEESEEEEEEEETTE-------------------------------------EEEEEEET
T ss_pred CCCcCccCc-CCC-CceEEEEEeCEEEEEEEeCCC-------------------------------------CEEEEecC
Confidence 346677788 333 347999999998888764321 13668999
Q ss_pred CCEEEeCCCCeeeeeecC
Q 042108 378 GEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~ 395 (406)
||++|||+|--|...|.+
T Consensus 135 GDv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 135 GDAIKIQAGTPFYLINPD 152 (445)
T ss_dssp TEEEEECTTCCEEEEECC
T ss_pred CCEEEECCCCcEEEEECC
Confidence 999999999999999986
No 118
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=88.16 E-value=0.45 Score=37.32 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=23.5
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCccE
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEESI 398 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~sI 398 (406)
..+++|||+++||+|=.|...|.+++.
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 94 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSENGCS 94 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeCCCeE
Confidence 568999999999999999999976543
No 119
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=88.09 E-value=2.5 Score=37.26 Aligned_cols=81 Identities=14% Similarity=0.067 Sum_probs=50.3
Q ss_pred ceeEeccCCCCCcceecC--CCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCC
Q 042108 292 RWVIIGPAGSGSSFHMDP--NSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKR 369 (406)
Q Consensus 292 ~~l~iG~~gs~t~~H~D~--~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~ 369 (406)
.+...+.+|..-.+|+.. ....-+..+++|+=.-+++.-.. .|| .+ .+
T Consensus 49 ~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~--------------~Sp------------Tf----g~ 98 (183)
T 1dzr_A 49 DNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRK--------------ESP------------TF----GQ 98 (183)
T ss_dssp EEEEEEETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCT--------------TCT------------TT----TC
T ss_pred EEEEeCCCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCC--------------CCC------------CC----Ce
Confidence 345566677777788874 22236788899984434432111 111 11 12
Q ss_pred cEEEEEcC--CCEEEeCCCCeeeeeecCccEEEeee
Q 042108 370 PIECICKA--GEVIFVPNGWWHLVINLEESIAITQN 403 (406)
Q Consensus 370 ~~~~vl~p--GD~LfIP~gWwH~V~nl~~sIavt~n 403 (406)
...++|.+ +..||||.|+||...++++. ++-..
T Consensus 99 ~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 99 WVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp EEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred EEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 25566665 68999999999999999875 44333
No 120
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=87.92 E-value=1.2 Score=43.13 Aligned_cols=56 Identities=13% Similarity=0.003 Sum_probs=41.7
Q ss_pred CCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCC
Q 042108 300 GSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGE 379 (406)
Q Consensus 300 gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD 379 (406)
+...+-|..+.+ ....++.|+=++.+= .. -..+|++||
T Consensus 262 g~~~~~h~~~~~--~~~~vleG~~~i~i~---------------------------------------g~-~~~~l~~Gd 299 (350)
T 1juh_A 262 TVTVPTWSFPGA--CAFQVQEGRVVVQIG---------------------------------------DY-AATELGSGD 299 (350)
T ss_dssp TSCCCCBCCSSC--EEEEEEESCEEEEET---------------------------------------TS-CCEEECTTC
T ss_pred CCCCCcccCCCc--EEEEEEeeEEEEEEC---------------------------------------Ce-EEEEeCCCC
Confidence 445666766666 778888887666651 00 145899999
Q ss_pred EEEeCCCCeeeeeecCcc
Q 042108 380 VIFVPNGWWHLVINLEES 397 (406)
Q Consensus 380 ~LfIP~gWwH~V~nl~~s 397 (406)
++|||+|-.|.+.+.++.
T Consensus 300 ~~~iPag~~h~~~~~~~~ 317 (350)
T 1juh_A 300 VAFIPGGVEFKYYSEAYF 317 (350)
T ss_dssp EEEECTTCCEEEEESSSS
T ss_pred EEEECCCCCEEEEecCCe
Confidence 999999999999998763
No 121
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=87.87 E-value=0.49 Score=39.41 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=25.1
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCccEEEe
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEESIAIT 401 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~sIavt 401 (406)
..+++|||++|+|+|..|...|.+++..+.
T Consensus 94 ~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~ 123 (133)
T 2pyt_A 94 TMIAKAGDVMFIPKGSSIEFGTPTSVRFLY 123 (133)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEECCCcEEEECCCCEEEEEeCCCEEEEE
Confidence 568999999999999999999877654443
No 122
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=87.59 E-value=0.4 Score=39.44 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=24.4
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCccEE
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEESIA 399 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~sIa 399 (406)
..+++|||+++||+|.-|...|.++.-.
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~~~~~~rK 115 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWEVDRHVKK 115 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEECCceeE
Confidence 5689999999999999999999886433
No 123
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=87.36 E-value=4.3 Score=36.39 Aligned_cols=77 Identities=18% Similarity=0.194 Sum_probs=50.1
Q ss_pred cceeEec-cCCCCCcceecC--CCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCC
Q 042108 291 YRWVIIG-PAGSGSSFHMDP--NSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWK 367 (406)
Q Consensus 291 ~~~l~iG-~~gs~t~~H~D~--~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~ 367 (406)
..+...+ .+|..-.+|+.. ....=+..+++|+=.-+++.-... || .+
T Consensus 70 Q~n~S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~--------------Sp------------Tf---- 119 (205)
T 3ryk_A 70 QDNVSYSAEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKD--------------SP------------TF---- 119 (205)
T ss_dssp EEEEEEESSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTT--------------ST------------TT----
T ss_pred EEEEEEeCCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCC--------------CC------------CC----
Confidence 3455566 678877888874 233368889999944344332211 11 11
Q ss_pred CCcEEEEEcC--CCEEEeCCCCeeeeeecCcc
Q 042108 368 KRPIECICKA--GEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 368 ~~~~~~vl~p--GD~LfIP~gWwH~V~nl~~s 397 (406)
.+...++|.+ +-.||||.|+||...++++.
T Consensus 120 g~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 120 KQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp TCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred CeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 1235667765 89999999999999999874
No 124
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=87.20 E-value=1.5 Score=38.27 Aligned_cols=26 Identities=19% Similarity=-0.088 Sum_probs=23.3
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
-..+|++||++|||++=.|...|.++
T Consensus 144 ~~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 144 QWHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp EEEEECTTCEEEEECSSSEEEEESSS
T ss_pred EEEEeCCCCEEEEcCCCCeEeECCCC
Confidence 36689999999999999999999865
No 125
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=86.99 E-value=4.2 Score=37.00 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=49.4
Q ss_pred cceeEeccCCCCCcceecCC--CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCC
Q 042108 291 YRWVIIGPAGSGSSFHMDPN--STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKK 368 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~~--~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~ 368 (406)
..+...+.+|..-.+|+... ...=+..+++|+=.-+++.-.. .|| .+ .
T Consensus 67 Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~--------------~Sp------------Tf----G 116 (225)
T 1upi_A 67 QVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIRE--------------GSP------------TF----G 116 (225)
T ss_dssp EEEEEEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCB--------------TCT------------TT----T
T ss_pred EEEEEeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCC--------------CCC------------CC----C
Confidence 34555666777777887742 3336788899985444442111 111 11 1
Q ss_pred CcEEEEEcC--CCEEEeCCCCeeeeeecCcc
Q 042108 369 RPIECICKA--GEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 369 ~~~~~vl~p--GD~LfIP~gWwH~V~nl~~s 397 (406)
+...++|.+ +..||||.|+||...++++.
T Consensus 117 ~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 117 RWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp CEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred cEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 235666765 58999999999999999875
No 126
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=86.96 E-value=2.5 Score=37.53 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=41.8
Q ss_pred cceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEe
Q 042108 304 SFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFV 383 (406)
Q Consensus 304 ~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfI 383 (406)
++|+.+.+ -+..++.|+-.+.+=-.+ ...++..+++||+|+|
T Consensus 98 ~~H~H~~~--Ei~yVleG~G~f~i~d~~------------------------------------d~~~~i~v~~GDlIiI 139 (191)
T 1vr3_A 98 EEHLHLDE--EIRYILEGSGYFDVRDKE------------------------------------DKWIRISMEKGDMITL 139 (191)
T ss_dssp SCEECSSC--EEEEEEEEEEEEEEECTT------------------------------------SCEEEEEEETTEEEEE
T ss_pred cceECCcc--eEEEEEeceEEEEECCCC------------------------------------CeEEEEEECCCCEEEE
Confidence 56888776 789999999777662110 0225789999999999
Q ss_pred CCCCeeeeeecCc
Q 042108 384 PNGWWHLVINLEE 396 (406)
Q Consensus 384 P~gWwH~V~nl~~ 396 (406)
|+|=.|...+.+.
T Consensus 140 PaG~~H~f~~~~~ 152 (191)
T 1vr3_A 140 PAGIYHRFTLDEK 152 (191)
T ss_dssp CTTCCEEEEECTT
T ss_pred CcCCcCCcccCCC
Confidence 9999999887655
No 127
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=86.95 E-value=2.1 Score=38.25 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=49.0
Q ss_pred cceeEeccCCCCCcceecCCCCcceEEEEE-eEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCC
Q 042108 291 YRWVIIGPAGSGSSFHMDPNSTSAWNAIIK-GSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKR 369 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~~~t~~~~~qi~-G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~ 369 (406)
..+...+.+|..-.+|+.... -+..+++ |+=.-+++.-.. || .+ .+
T Consensus 61 Q~n~S~s~~GvlRGlH~h~q~--Klv~~~~~G~v~dV~VDlR~---------------Sp------------Tf----g~ 107 (197)
T 1nxm_A 61 QNNVSFSRKNVLRGLHAEPWD--KYISVADGGKVLGTWVDLRE---------------GE------------TF----GN 107 (197)
T ss_dssp EEEEEEEETTBEEEEEECSSC--EEEEECSSCCEEEEEEECBS---------------ST------------TT----TC
T ss_pred EEEEEECCCCCcceeeecccc--eEEEEcCCCEEEEEEEECCC---------------CC------------CC----Ce
Confidence 335556778888889997443 5666777 763333322111 11 11 13
Q ss_pred cEEEEEcCCCEEEeCCCCeeeeeecCcc
Q 042108 370 PIECICKAGEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 370 ~~~~vl~pGD~LfIP~gWwH~V~nl~~s 397 (406)
...++|.++-.||||.|.||...++++.
T Consensus 108 ~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 108 TYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred EEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 3677888899999999999999999874
No 128
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=86.93 E-value=0.86 Score=45.53 Aligned_cols=63 Identities=11% Similarity=0.151 Sum_probs=45.6
Q ss_pred eEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 294 VIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
+-+.| ++....|+ ++ ++-+..+++|+=+..++.|+. ....
T Consensus 49 ~~l~p-~gl~~Phh-~~-A~ei~yV~~G~g~~g~V~~~~-------------------------------------~~~~ 88 (418)
T 3s7i_A 49 IEAKP-NTLVLPKH-AD-ADNILVIQQGQATVTVANGNN-------------------------------------RKSF 88 (418)
T ss_dssp EEECT-TEEEEEEE-ES-EEEEEEEEESEEEEEEECSSC-------------------------------------EEEE
T ss_pred EEecC-Cceeeeee-CC-CCeEEEEEEeeEEEEEEecCC-------------------------------------EEEE
Confidence 44554 55555552 33 446789999998887766531 1356
Q ss_pred EEcCCCEEEeCCCCeeeeeecCc
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
.|++||+++||+|.-|...|.+.
T Consensus 89 ~l~~GDv~~~P~G~~h~~~N~g~ 111 (418)
T 3s7i_A 89 NLDEGHALRIPSGFISYILNRHD 111 (418)
T ss_dssp EEETTEEEEECTTCEEEEEECCS
T ss_pred EecCCCEEEECCCCeEEEEecCC
Confidence 89999999999999999999853
No 129
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=86.82 E-value=1.7 Score=37.78 Aligned_cols=56 Identities=9% Similarity=-0.005 Sum_probs=41.6
Q ss_pred CCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCC
Q 042108 300 GSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGE 379 (406)
Q Consensus 300 gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD 379 (406)
|+.+..|.++.. .-+..++.|+-.+.+ ..-..+|.+||
T Consensus 99 G~~~~~~~~h~g-EE~~yVLeG~v~vtl-----------------------------------------~g~~~~L~~Gd 136 (166)
T 2vpv_A 99 SGQKKLSNSFRT-YITFHVIQGIVEVTV-----------------------------------------CKNKFLSVKGS 136 (166)
T ss_dssp GGGCEEEECCSE-EEEEEEEESEEEEEE-----------------------------------------TTEEEEEETTC
T ss_pred CCCCCCccCCCc-eEEEEEEEeEEEEEE-----------------------------------------CCEEEEEcCCC
Confidence 555555544432 367888999877766 01366899999
Q ss_pred EEEeCCCCeeeeeecCcc
Q 042108 380 VIFVPNGWWHLVINLEES 397 (406)
Q Consensus 380 ~LfIP~gWwH~V~nl~~s 397 (406)
++|||+|=-|..+|..+.
T Consensus 137 s~~iP~g~~H~~~N~~d~ 154 (166)
T 2vpv_A 137 TFQIPAFNEYAIANRGND 154 (166)
T ss_dssp EEEECTTCEEEEEECSSS
T ss_pred EEEECCCCCEEEEECCCC
Confidence 999999999999999764
No 130
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=86.51 E-value=1.6 Score=44.61 Aligned_cols=89 Identities=9% Similarity=0.023 Sum_probs=53.8
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCC-CCcccCCCchhhhhhhhhhhhhcCCCCcE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSD-GAEVACPVSIMEWFMNFYGATKNWKKRPI 371 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d-~~~v~sp~~~~~w~~~~~p~~~~~~~~~~ 371 (406)
.+-|.| |+....|+.+.. -|..+++|+=+..+.-|+... -|-... +..-..- . . ...+.+ .+-.
T Consensus 49 r~~i~p-ggl~~Ph~~~~~--~i~yV~~G~g~vg~v~pgc~e--t~~~~~~~~~~~~~-~--~--~~~~~d-----~~qk 113 (493)
T 2d5f_A 49 KRTLNR-NGLHLPSYSPYP--QMIIVVQGKGAIGFAFPGCPE--TFEKPQQQSSRRGS-R--S--QQQLQD-----SHQK 113 (493)
T ss_dssp EEEECT-TEEEEEEECSSC--EEEEEEECEEEEEECCTTCCC--CEEECC------------------CSE-----EESC
T ss_pred EEEeCC-CcEeCceecCCC--eEEEEEeCEEEEEEEeCCCcc--cccccccccccccc-c--c--cccccc-----ccce
Confidence 444554 677788888654 799999999999999887642 121110 0000000 0 0 000000 0012
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
...|++||+++||+|--|...|.++
T Consensus 114 v~~l~~GDvi~iPaG~~h~~~N~g~ 138 (493)
T 2d5f_A 114 IRHFNEGDVLVIPPGVPYWTYNTGD 138 (493)
T ss_dssp EEEEETTEEEEECTTCCEEEEECSS
T ss_pred EEEecCCCEEEECCCCcEEEEeCCC
Confidence 3489999999999999999999975
No 131
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=85.87 E-value=0.64 Score=40.94 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=23.0
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+...+++||+++||+|=+|...+.+.
T Consensus 122 ~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 122 FQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp EEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred EEEEECCCCEEEECCCCeEeeecCCC
Confidence 57889999999999999999887655
No 132
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=85.81 E-value=2.7 Score=40.66 Aligned_cols=65 Identities=14% Similarity=0.038 Sum_probs=44.4
Q ss_pred eccCCCCCc--ceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 296 IGPAGSGSS--FHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 296 iG~~gs~t~--~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
+.+.+...+ .|+++.. .=++.+++|+=++.+=-. + ...-+.
T Consensus 54 ~~p~g~~~~~~~H~H~~~-~E~~~Vl~G~~~~~v~~~-----------~-------------------------g~~~~~ 96 (350)
T 1juh_A 54 NAPHSDALGVLPHIHQKH-YENFYCNKGSFQLWAQSG-----------N-------------------------ETQQTR 96 (350)
T ss_dssp EECCCSSCSSCCEECSSC-EEEEEEEESEEEEEEEET-----------T-------------------------SCCEEE
T ss_pred EcCCCCCCCCccccCCCc-eEEEEEEEEEEEEEECCc-----------C-------------------------CceEEE
Confidence 444444444 7887732 257778999876665110 0 011467
Q ss_pred EEcCCCEEEeCCCCeeeeeecCcc
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~s 397 (406)
+|+|||++|||+|-.|...|.++.
T Consensus 97 ~L~~GD~v~ip~g~~H~~~n~~~~ 120 (350)
T 1juh_A 97 VLSSGDYGSVPRNVTHTFQIQDPD 120 (350)
T ss_dssp EEETTCEEEECTTEEEEEEECSTT
T ss_pred EECCCCEEEECCCCcEEEEeCCCC
Confidence 899999999999999999998653
No 133
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=84.97 E-value=4.2 Score=36.76 Aligned_cols=77 Identities=9% Similarity=0.089 Sum_probs=48.8
Q ss_pred cceeEeccCCCCCcceecCC--CCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCC
Q 042108 291 YRWVIIGPAGSGSSFHMDPN--STSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKK 368 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~~--~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~ 368 (406)
..+...+.+|..-.+|+... ...-+..+++|+=.-+++.-.. .|| .+ .
T Consensus 56 Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~--------------~Sp------------Tf----G 105 (216)
T 2c0z_A 56 QANLSVSVRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRV--------------GSP------------TY----G 105 (216)
T ss_dssp EEEEEEEETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCB--------------TCT------------TT----T
T ss_pred EEEEEeCCCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCC--------------CCC------------CC----C
Confidence 34555666777777887753 2236788899984433332111 111 11 1
Q ss_pred CcEEEEEcC--CCEEEeCCCCeeeeeecCcc
Q 042108 369 RPIECICKA--GEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 369 ~~~~~vl~p--GD~LfIP~gWwH~V~nl~~s 397 (406)
+...++|.+ +..||||.|+||...++++.
T Consensus 106 ~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 106 CWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 235666766 57999999999999999875
No 134
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=84.18 E-value=0.49 Score=37.22 Aligned_cols=25 Identities=24% Similarity=0.050 Sum_probs=22.6
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+..++|||++|+|+|-.|.+.|..+
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEECCCCEEEECCCCceeCEECCC
Confidence 4578999999999999999999875
No 135
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=83.99 E-value=1.4 Score=38.42 Aligned_cols=56 Identities=23% Similarity=0.313 Sum_probs=40.9
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|+.+++|..... -+..+|+|+=.+.+= + .-+.+|++
T Consensus 87 ~PG~~~~~H~H~~e--E~~~VLeGel~l~ld-------------~---------------------------ge~~~L~~ 124 (172)
T 3es1_A 87 LPGKESPMHRTNSI--DYGIVLEGEIELELD-------------D---------------------------GAKRTVRQ 124 (172)
T ss_dssp CTTCBCCCBCCSEE--EEEEEEESCEEEECG-------------G---------------------------GCEEEECT
T ss_pred CCCCCCCCeecCce--EEEEEEeCEEEEEEC-------------C---------------------------CeEEEECC
Confidence 45777888887654 466788877544330 0 02568999
Q ss_pred CCEEEeCCCCeeeeeecCc
Q 042108 378 GEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~~ 396 (406)
||++ +|+|-.|...|..+
T Consensus 125 GDsi-~~~g~~H~~~N~g~ 142 (172)
T 3es1_A 125 GGII-VQRGTNHLWRNTTD 142 (172)
T ss_dssp TCEE-EECSCCBEEECCSS
T ss_pred CCEE-EeCCCcEEEEeCCC
Confidence 9999 99999999999865
No 136
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=83.62 E-value=5.1 Score=35.65 Aligned_cols=75 Identities=15% Similarity=0.163 Sum_probs=48.6
Q ss_pred eeEeccCCCCCcceecC--CCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCc
Q 042108 293 WVIIGPAGSGSSFHMDP--NSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRP 370 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~--~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~ 370 (406)
+...+.+|..-.+|+.. ....-+..+++|+=.-+++.-... || .+ .+.
T Consensus 68 n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~--------------Sp------------Tf----G~~ 117 (196)
T 1wlt_A 68 NMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKS--------------SP------------TF----GKY 117 (196)
T ss_dssp EEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTT--------------ST------------TT----TCE
T ss_pred EEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCC--------------CC------------CC----CeE
Confidence 44456667766788774 333367788899876555432211 11 11 123
Q ss_pred EEEEEcC--CCEEEeCCCCeeeeeecCcc
Q 042108 371 IECICKA--GEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 371 ~~~vl~p--GD~LfIP~gWwH~V~nl~~s 397 (406)
..++|.+ +..||||.|+||...++++.
T Consensus 118 ~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 118 VKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp EEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred EEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 5666764 79999999999999999873
No 137
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=83.22 E-value=3.4 Score=38.41 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=22.9
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
...+++||+++||++-.|...|.++
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 6789999999999999999999855
No 138
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=82.77 E-value=3.1 Score=42.05 Aligned_cols=102 Identities=15% Similarity=0.050 Sum_probs=56.4
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCC-cccCCCchhh----hhhhhhhhhhcCC
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGA-EVACPVSIME----WFMNFYGATKNWK 367 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~-~v~sp~~~~~----w~~~~~p~~~~~~ 367 (406)
.+-|.| ++....|+. + +.-+..+++|+=+.-++-|+.. ..|-...+. .-..+-.... -.-..-..+++
T Consensus 54 R~~i~P-~gl~~Ph~h-~-a~ei~yV~qG~g~~g~v~pgc~--etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 126 (465)
T 3qac_A 54 RRTIEP-HGLLLPSFT-S-APELIYIEQGNGITGMMIPGCP--ETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQD-- 126 (465)
T ss_dssp EEEECT-TEEEEEEEE-S-SCEEEEEEECEEEEEEECTTCC--CCC------------------------------CC--
T ss_pred EEEEcC-CcCcccEEc-C-CCEEEEEEECcEEEEEecCCCC--ceeecchhccccccccccccccccccccccccccc--
Confidence 344544 677788888 3 3489999999999999988652 344211000 0000000000 00000000111
Q ss_pred CCcEEEEEcCCCEEEeCCCCeeeeeecCc--cEEEe
Q 042108 368 KRPIECICKAGEVIFVPNGWWHLVINLEE--SIAIT 401 (406)
Q Consensus 368 ~~~~~~vl~pGD~LfIP~gWwH~V~nl~~--sIavt 401 (406)
.+-....+++||+++||+|--|...|.++ -++|+
T Consensus 127 ~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~ 162 (465)
T 3qac_A 127 QHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVI 162 (465)
T ss_dssp CCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred cccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEE
Confidence 12236789999999999999999999864 45543
No 139
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=82.12 E-value=2.2 Score=36.70 Aligned_cols=22 Identities=14% Similarity=0.018 Sum_probs=20.1
Q ss_pred EEEEcCCCEEEeCCCCeeeeee
Q 042108 372 ECICKAGEVIFVPNGWWHLVIN 393 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~n 393 (406)
...++|||+++||+|=.|.+.+
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEES
T ss_pred EEEeCCCCEEEECCCCeEeeEC
Confidence 5689999999999999999985
No 140
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=80.99 E-value=3.2 Score=42.41 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=53.3
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCC-Ccc-cC---CCchhhhhhhhhhhhhcCC
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDG-AEV-AC---PVSIMEWFMNFYGATKNWK 367 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~-~~v-~s---p~~~~~w~~~~~p~~~~~~ 367 (406)
.+-|.| ++....|+.... -+..+++|+=...+.-|+... -|-.... ..- .+ .-...+-... ...++
T Consensus 52 r~~i~p-~gl~lPh~~~a~--~~~yV~~G~g~~g~v~pg~~e--t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d-- 122 (510)
T 3c3v_A 52 RLVLRR-NALRRPFYSNAP--QEIFIQQGRGYFGLIFPGCPS--TYEEPAQQGRRYQSQRPPRRLQEEDQS--QQQQD-- 122 (510)
T ss_dssp EEEECT-TEEEEEEECSSC--EEEEEEECCEEEEEECTTCCC--CEEEECCC----------------------CEEE--
T ss_pred EEEECC-CCCccceecCCC--eEEEEEeCEEEEEEEeCCCcc--ccccccccccccccccccccccccccc--ccccc--
Confidence 444554 667778887643 799999999999999887532 1210000 000 00 0000000000 00000
Q ss_pred CCcEEEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 368 KRPIECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 368 ~~~~~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
.+-....+++||+++||+|--|...|.++
T Consensus 123 ~~qkv~~v~~GDvi~iPaG~~hw~~N~g~ 151 (510)
T 3c3v_A 123 SHQKVHRFNEGDLIAVPTGVAFWLYNDHD 151 (510)
T ss_dssp EESCCEEECTTEEEEECTTCEEEEEECSS
T ss_pred ccceEEEecCCCEEEECCCCCEEEEeCCC
Confidence 01123589999999999999999999975
No 141
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=79.58 E-value=3.2 Score=41.93 Aligned_cols=39 Identities=13% Similarity=-0.037 Sum_probs=29.9
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCC
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVP 334 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~ 334 (406)
.+-|.| ++....|+.+. +-+..+++|+=..-++-|+...
T Consensus 47 r~~i~p-~Gl~lPh~~~a--~e~~~V~~G~g~~G~v~pgc~e 85 (466)
T 3kgl_A 47 RYIIES-KGLYLPSFFST--AKLSFVAKGEGLMGRVVPGCAE 85 (466)
T ss_dssp EEEECT-TEEEEEEEESS--CEEEEEEECEEEEEEECTTCCC
T ss_pred EEEECC-CCEeCCeeCCC--CeEEEEEeCeEEEEEecCCCcc
Confidence 455554 66777788863 4789999999999999998644
No 142
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=78.50 E-value=5.6 Score=40.50 Aligned_cols=91 Identities=14% Similarity=0.137 Sum_probs=53.9
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+-|. +|+....|+. + ++-+..+++|+=.+-|+-|+.. ..|-...... .+. -. .... ..--.
T Consensus 50 R~~i~-pggl~lPh~~-~-A~ei~~V~qG~g~~G~v~p~~~--e~f~~~~~~~-~~~-------~~---~~~d--~~qk~ 111 (496)
T 3ksc_A 50 RATLQ-RNALRRPYYS-N-APQEIFIQQGNGYFGMVFPGCP--ETFEEPQESE-QGE-------GR---RYRD--RHQKV 111 (496)
T ss_dssp EEEEC-TTEEEEEEEE-S-SCEEEEEEECCEEEEEECTTCC--CC--------------------------CC--CCCCE
T ss_pred EEEec-CCCEeCceEc-C-CCEEEEEEeCceEEEEEeCCCC--ccchhhhhcc-ccc-------cc---cccc--chhee
Confidence 34454 4667777888 3 4478999999999999988753 2331100000 000 00 0111 01113
Q ss_pred EEEcCCCEEEeCCCCeeeeeecCc--cEEEe
Q 042108 373 CICKAGEVIFVPNGWWHLVINLEE--SIAIT 401 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~V~nl~~--sIavt 401 (406)
..|++||++.||+|--|...|.++ -++|+
T Consensus 112 ~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~ 142 (496)
T 3ksc_A 112 NRFREGDIIAVPTGIVFWMYNDQDTPVIAVS 142 (496)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSSCEEEEE
T ss_pred eccCCCCEEEECCCCcEEEEcCCCCCEEEEE
Confidence 389999999999999999999864 44443
No 143
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=77.96 E-value=2.4 Score=41.92 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=47.4
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEE
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIE 372 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~ 372 (406)
.+-+.| |+....|+.. .+-|..+++|+=+..++.|.. ..+
T Consensus 56 ~~~l~p-gg~~~ph~~~--a~ei~yVl~G~~~v~~v~~~~-------------------------------------~~~ 95 (397)
T 2phl_A 56 EFRSKP-ETLLLPQQAD--AELLLVVRSGSAILVLVKPDD-------------------------------------RRE 95 (397)
T ss_dssp EEEECS-SEEEEEEEES--EEEEEEEEESEEEEEEEETTT-------------------------------------EEE
T ss_pred EEEECC-CcCccCEecC--CCeEEEEEeeeEEEEEEeCCC-------------------------------------cEE
Confidence 344555 5555667653 347999999999888875431 135
Q ss_pred EEEcCCCE------EEeCCCCeeeeeecC
Q 042108 373 CICKAGEV------IFVPNGWWHLVINLE 395 (406)
Q Consensus 373 ~vl~pGD~------LfIP~gWwH~V~nl~ 395 (406)
.++++||+ ++||+|--|...|.+
T Consensus 96 ~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 96 YFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp EEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred EEECCCCcccccceEEECCCCcEEEEeCC
Confidence 68999999 999999999999986
No 144
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=77.86 E-value=11 Score=30.71 Aligned_cols=65 Identities=18% Similarity=0.361 Sum_probs=47.8
Q ss_pred eecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEEEeCC
Q 042108 306 HMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVIFVPN 385 (406)
Q Consensus 306 H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~LfIP~ 385 (406)
|-=-.+|-+-+.+++|+=+++.+.-+... + ..-+.++.+|+.-+||+
T Consensus 32 HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~----------~-----------------------~~~~~~~~~~~~~~i~P 78 (119)
T 3dl3_A 32 HNTAVDVFGQICVMEGVVTYYGFANSEAT----------E-----------------------PEIKVVINAGQFATSPP 78 (119)
T ss_dssp BCCCTTEEEEEEEEESEEEEEEESSTTCC----------S-----------------------CSEEEEEETTEEEEECT
T ss_pred cCCCCcEEEEEEEEEeEEEEEEEcCCCCC----------c-----------------------ccEEEEeCCCCCceeCC
Confidence 33334556789999999999987644321 0 11467889999999999
Q ss_pred CCeeeeeecCccEEEeeec
Q 042108 386 GWWHLVINLEESIAITQNY 404 (406)
Q Consensus 386 gWwH~V~nl~~sIavt~nF 404 (406)
.-||.|. +.+-+.+..+|
T Consensus 79 q~wHrVe-~sdD~~f~leF 96 (119)
T 3dl3_A 79 QYWHRIE-LSDDAQFNINF 96 (119)
T ss_dssp TCEEEEE-ECTTCEEEEEE
T ss_pred CceEEEE-ECCCeEEEEEE
Confidence 9999999 76666666666
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=77.12 E-value=17 Score=32.34 Aligned_cols=79 Identities=10% Similarity=0.147 Sum_probs=52.5
Q ss_pred cceeEeccCCCCCcceecC--CCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCC
Q 042108 291 YRWVIIGPAGSGSSFHMDP--NSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKK 368 (406)
Q Consensus 291 ~~~l~iG~~gs~t~~H~D~--~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~ 368 (406)
..+.-.+.+|+.-.+|+.. ....=+..+++|+=.-+++.-... || .+ .
T Consensus 45 Q~n~S~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~--------------Sp------------Tf----G 94 (201)
T 4hn1_A 45 QVNVAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIG--------------SP------------TF----G 94 (201)
T ss_dssp EEEEEEECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBT--------------CT------------TT----T
T ss_pred EEEEEEcCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCC--------------CC------------CC----C
Confidence 4456677788888889874 233468888999965555432211 11 11 1
Q ss_pred CcEEEEEcC--CCEEEeCCCCeeeeeecCccEE
Q 042108 369 RPIECICKA--GEVIFVPNGWWHLVINLEESIA 399 (406)
Q Consensus 369 ~~~~~vl~p--GD~LfIP~gWwH~V~nl~~sIa 399 (406)
+...++|.+ +-.||||.|.||...+|++.-.
T Consensus 95 ~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~ 127 (201)
T 4hn1_A 95 RWEIVPMDAERNTAVYLTAGLGRAFLSLTDDAT 127 (201)
T ss_dssp CEEEEEEETTTCCEEEECTTCEEEEEECSTTEE
T ss_pred eEEEEEecCCCCCEEEeCCcceEEEeecCCCeE
Confidence 235566665 8899999999999999987433
No 146
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=74.07 E-value=7.1 Score=35.05 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=28.2
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeec---CccEEEeeecc
Q 042108 371 IECICKAGEVIFVPNGWWHLVINL---EESIAITQNYV 405 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl---~~sIavt~nFv 405 (406)
..+.-++|++|..|+.-+|.|..- ++=|||+.|++
T Consensus 169 ~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~ 206 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYA 206 (216)
T ss_dssp EEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEE
T ss_pred eEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEee
Confidence 356678999999999999999873 35677777765
No 147
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=73.34 E-value=3.1 Score=34.96 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=42.6
Q ss_pred CCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcCCCEE
Q 042108 302 GSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKAGEVI 381 (406)
Q Consensus 302 ~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~pGD~L 381 (406)
...+|.+.. |.=++.+++|+=+..+-.....+ ..--.+.++|||+.
T Consensus 41 i~~~h~H~~-tDE~Fivl~G~l~i~~rd~~~~~---------------------------------~~d~~V~l~~Ge~y 86 (140)
T 3d0j_A 41 IAHLEIHHS-TDEQFILSAGKAILITAEKENDK---------------------------------FNIELTLMEKGKVY 86 (140)
T ss_dssp CCEEEEESS-CCEEEEEEESCEEEEEEEEETTE---------------------------------EEEEEEECCTTCCE
T ss_pred CHhhccCCC-CCeEEEEEecEEEEEEecCcCCC---------------------------------CccceEEecCCCEE
Confidence 455677764 45789999998665552111000 01136789999999
Q ss_pred EeCCCCeeeeeecCccE
Q 042108 382 FVPNGWWHLVINLEESI 398 (406)
Q Consensus 382 fIP~gWwH~V~nl~~sI 398 (406)
.||.|-||....-+++-
T Consensus 87 vVPkGveH~p~a~~e~~ 103 (140)
T 3d0j_A 87 NVPAECWFYSITQKDTK 103 (140)
T ss_dssp EECTTCEEEEEECTTCE
T ss_pred EeCCCccCcccCCCceE
Confidence 99999999988776543
No 148
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=70.52 E-value=3.5 Score=38.56 Aligned_cols=25 Identities=24% Similarity=0.185 Sum_probs=22.9
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+.+|++||++|+|++-.|...|..+
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEEEECCC
Confidence 6689999999999999999999854
No 149
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=69.12 E-value=3.2 Score=38.17 Aligned_cols=25 Identities=16% Similarity=0.317 Sum_probs=23.0
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+.+|+|||++|+|++-.|...|..+
T Consensus 100 ~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 100 TFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 6789999999999999999999854
No 150
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=68.52 E-value=3.1 Score=38.26 Aligned_cols=25 Identities=16% Similarity=0.049 Sum_probs=21.8
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
...+++||++|+|++-.|...|..+
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC--
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 6689999999999999999999854
No 151
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=68.37 E-value=3.5 Score=39.12 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=24.8
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCccEEEee
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
-.+.++|||.+|||+|=.|....-. .+=|.+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~-~~Eiqa 188 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEGLR-VLEVSS 188 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEESEE-EEEEEE
T ss_pred ceeECCCCCEEEcCCCCceEcCCCC-eeeecc
Confidence 4678999999999999999977655 555544
No 152
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=67.57 E-value=3.6 Score=38.17 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=23.0
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+.+|+|||++|+|++-.|...|..+
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEEECCCCEEEECCCCCEEEEeCCC
Confidence 6689999999999999999999964
No 153
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=67.24 E-value=19 Score=33.68 Aligned_cols=33 Identities=12% Similarity=0.028 Sum_probs=29.6
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCccEEEeee
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEESIAITQN 403 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~n 403 (406)
.+..|.+||+|.||++--|+..-.++|++++..
T Consensus 244 q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~ 276 (286)
T 2qnk_A 244 RRLSLAPDDSLLVLAGTSYAWERTQGSVALSVT 276 (286)
T ss_dssp EEEEECTTEEEEECTTCCEEEEECTTCEEEEEE
T ss_pred eEEeccCCCEEEecCCCeEEEEecCCeEEEEEE
Confidence 577899999999999999999999999887653
No 154
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=66.25 E-value=4.6 Score=36.90 Aligned_cols=26 Identities=12% Similarity=0.300 Sum_probs=23.3
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCcc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEES 397 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~s 397 (406)
+.+|++||.+|+|++--|...|.+++
T Consensus 87 ~~~l~~Gd~~~~p~~~~H~~~n~~~~ 112 (246)
T 1sfn_A 87 TRTLREYDYVYLPAGEKHMLTAKTDA 112 (246)
T ss_dssp EEEECTTEEEEECTTCCCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCE
Confidence 66899999999999999999998544
No 155
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=64.64 E-value=4.4 Score=38.74 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=20.8
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeec
Q 042108 371 IECICKAGEVIFVPNGWWHLVINL 394 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl 394 (406)
-.+.++|||.+|||+|=.|....-
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G 181 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCKG 181 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECSS
T ss_pred eEEEcCCCCEEEcCCCCceEecCC
Confidence 467899999999999999997653
No 156
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=64.37 E-value=5.2 Score=39.47 Aligned_cols=31 Identities=13% Similarity=0.089 Sum_probs=24.7
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCccEEEee
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
-.+.++|||.+|||+|=.|....-. ++=|.+
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~G~-~~Eima 270 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQGV-ALEVMA 270 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEE-EEEEEC
T ss_pred eEEECCCCCEEEcCCCCceEcCCCc-EEEEec
Confidence 3678999999999999999977654 555544
No 157
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=62.79 E-value=6 Score=39.63 Aligned_cols=31 Identities=19% Similarity=0.099 Sum_probs=24.8
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCccEEEee
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEESIAITQ 402 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~sIavt~ 402 (406)
-.+.|+|||.+|||+|=.|....-+ +|=+-+
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~G~-~vE~Ma 296 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYISGD-IIECMA 296 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEE-EEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCCCc-EEEEec
Confidence 3678999999999999999987765 554443
No 158
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=61.45 E-value=5.8 Score=36.16 Aligned_cols=26 Identities=15% Similarity=0.059 Sum_probs=23.4
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
-...|+|||+||++++-.|...|..+
T Consensus 204 ~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 204 NYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 46689999999999999999999865
No 159
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=60.49 E-value=4.3 Score=32.98 Aligned_cols=24 Identities=13% Similarity=0.099 Sum_probs=18.3
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecC
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
...++|||++++|+||-..-...+
T Consensus 81 ~~~l~aGD~~~~P~G~~gtWev~e 104 (116)
T 3es4_A 81 PVKIGPGSIVSIAKGVPSRLEILS 104 (116)
T ss_dssp CEEECTTEEEEECTTCCEEEEECS
T ss_pred EEEECCCCEEEECCCCeEEEEEeE
Confidence 458999999999999955444433
No 160
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=58.99 E-value=12 Score=30.74 Aligned_cols=25 Identities=24% Similarity=0.519 Sum_probs=21.9
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecC
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
-+..+++||+++||+|-.|...+.+
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEEEecCCeEEEEcCCCCEEEEeCC
Confidence 3668999999999999999988764
No 161
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=56.61 E-value=11 Score=29.34 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=22.6
Q ss_pred cEEEEEcCCCEEEeCCCCeeeeeecC
Q 042108 370 PIECICKAGEVIFVPNGWWHLVINLE 395 (406)
Q Consensus 370 ~~~~vl~pGD~LfIP~gWwH~V~nl~ 395 (406)
.++..|++||++.||.|..=...+-.
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~~ 30 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAAS 30 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESS
T ss_pred hhhceecCCcEEEECCCCceeEEecC
Confidence 37899999999999999988777765
No 162
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=55.09 E-value=8.5 Score=35.83 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=23.6
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCccE
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEESI 398 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~sI 398 (406)
+.+|++||.+|+|++--|.+.|.+++.
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~~Ar 136 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVESAT 136 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESSCEE
T ss_pred EEEEcCCCEEEECCCCCEEEEeCCCEE
Confidence 568999999999999999999976543
No 163
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=54.71 E-value=7.7 Score=32.35 Aligned_cols=29 Identities=10% Similarity=-0.279 Sum_probs=24.3
Q ss_pred EEEcCCCEEEeCCCCeee-eeecCccEEEe
Q 042108 373 CICKAGEVIFVPNGWWHL-VINLEESIAIT 401 (406)
Q Consensus 373 ~vl~pGD~LfIP~gWwH~-V~nl~~sIavt 401 (406)
.++++||.+++|+|=-|. +.+.++|+.+.
T Consensus 86 ~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 86 DTAIAPGYGYESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp EEEESSEEEEECTTCEESCCEEEEEEEEEE
T ss_pred eEeCCCEEEEECcCCccCCeECCCCeEEEE
Confidence 588999999999999999 77777776544
No 164
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=53.53 E-value=9.5 Score=35.51 Aligned_cols=25 Identities=20% Similarity=0.105 Sum_probs=22.7
Q ss_pred EEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 372 ECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
...+++||++|+|++-.|...|..+
T Consensus 226 ~~~V~~GD~i~~~~~~~h~~~n~G~ 250 (266)
T 4e2q_A 226 WYPVQAGDVIWMAPFVPQWYAALGK 250 (266)
T ss_dssp EEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEecCCCEEEECCCCcEEEEeCCC
Confidence 6689999999999999999999854
No 165
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=52.56 E-value=36 Score=31.07 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=54.0
Q ss_pred eEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEE
Q 042108 294 VIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIEC 373 (406)
Q Consensus 294 l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~ 373 (406)
++|--+|..+|+|+++.-.--+.+---|.=...||-.+... -.. + ..|+-+++-. ...++ ..-+.
T Consensus 110 ~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~--~~~--~-~~v~V~~DG~---~~~~~-------aG~~i 174 (246)
T 3kmh_A 110 IMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNE--QTA--D-SDITVVIDGC---RQKHT-------AGSQL 174 (246)
T ss_dssp EEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTS--SBC--C-SCEEEEETTE---EEEEC-------TTCEE
T ss_pred EeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCc--ccc--C-CCeEEecCCe---EEEeC-------CCCEE
Confidence 55667799999999998755555544445556676655421 000 0 1111111100 00111 23588
Q ss_pred EEcCCCEEEeCCCCeeeeeecCc
Q 042108 374 ICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
+|.|||-+=||+|-||.....+.
T Consensus 175 ~L~PGESiTl~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 175 RLSPGESICLPPGLYHSFWAEAG 197 (246)
T ss_dssp EECTTCEEEECTTEEEEEEECTT
T ss_pred EECCCCeEecCCCCEEEEEecCC
Confidence 99999999999999999988876
No 166
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=51.68 E-value=88 Score=26.91 Aligned_cols=21 Identities=29% Similarity=0.279 Sum_probs=17.8
Q ss_pred EcCCCE--EEeCCCCeeeeeecC
Q 042108 375 CKAGEV--IFVPNGWWHLVINLE 395 (406)
Q Consensus 375 l~pGD~--LfIP~gWwH~V~nl~ 395 (406)
+..||. ++||+|+|+...+++
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~ 123 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQ 123 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESS
T ss_pred cccCceeEEEECCCCEEEEEECC
Confidence 345888 999999999999883
No 167
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=49.25 E-value=8.9 Score=35.70 Aligned_cols=26 Identities=8% Similarity=-0.097 Sum_probs=23.6
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
-...++|||+||++++--|...|..+
T Consensus 230 ~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 230 DWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 47789999999999999999999864
No 168
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=48.14 E-value=85 Score=27.83 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=25.7
Q ss_pred EEEEEcCCCEEEeCC---CCeeeeeecCc---------cEEEee
Q 042108 371 IECICKAGEVIFVPN---GWWHLVINLEE---------SIAITQ 402 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~---gWwH~V~nl~~---------sIavt~ 402 (406)
..+.|++||+|.++. .|+|.|..... -|++|.
T Consensus 156 ~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 156 KRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp EEEEECTTCEEEECGGGTTCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred EEEECCCCCEEEECchHHceEeccCcccCCcCCCCCCCEEEEEe
Confidence 688999999999974 48999988764 566664
No 169
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=44.34 E-value=15 Score=31.27 Aligned_cols=28 Identities=18% Similarity=0.304 Sum_probs=23.3
Q ss_pred EEcCCCEEEeCCCCeeeeeec----CccEEEe
Q 042108 374 ICKAGEVIFVPNGWWHLVINL----EESIAIT 401 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~nl----~~sIavt 401 (406)
++.+||.++.|+|=.|.+.+. ++|+.+.
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp CBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred EECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 567899999999999999998 5676544
No 170
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=40.60 E-value=23 Score=31.09 Aligned_cols=28 Identities=14% Similarity=0.149 Sum_probs=23.9
Q ss_pred EEcCCCEEEeCCCCeeeeee--cCccEEEe
Q 042108 374 ICKAGEVIFVPNGWWHLVIN--LEESIAIT 401 (406)
Q Consensus 374 vl~pGD~LfIP~gWwH~V~n--l~~sIavt 401 (406)
+..+||.+++|.|--|...+ .+.|+-++
T Consensus 162 ~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 162 RFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp EEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred EECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 57789999999999999999 66777654
No 171
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=39.57 E-value=16 Score=33.38 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=15.4
Q ss_pred EEEEcCCCEEEeCCCCe
Q 042108 372 ECICKAGEVIFVPNGWW 388 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWw 388 (406)
..+++|||+++||+||-
T Consensus 206 ~~~~~aGD~~~~P~G~~ 222 (238)
T 3myx_A 206 SLTVNTGDTVFVAQGAP 222 (238)
T ss_dssp EEEECTTCEEEECTTCE
T ss_pred EEEECCCCEEEECCCCE
Confidence 67899999999999994
No 172
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=39.12 E-value=15 Score=37.60 Aligned_cols=39 Identities=8% Similarity=-0.100 Sum_probs=29.8
Q ss_pred eeEeccCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCC
Q 042108 293 WVIIGPAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVP 334 (406)
Q Consensus 293 ~l~iG~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~ 334 (406)
.+-|.+ +...+.||.+ .+-+..+++|+=..=++-|+...
T Consensus 52 R~~i~p-~Gl~lPh~~~--a~el~yV~qG~g~~G~v~Pgcpe 90 (531)
T 3fz3_A 52 RITIQR-NGLHLPSYSN--APQLIYIVQGRGVLGAVFSGCPE 90 (531)
T ss_dssp EEEECT-TEEEEEEEES--SCEEEEEEECEEEEEECCTTCCC
T ss_pred EEEecC-CCEeCCccCC--CCeEEEEEECcEEEEEEcCCCcc
Confidence 455655 6677789986 44899999999998888888653
No 173
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=37.92 E-value=22 Score=30.48 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=42.7
Q ss_pred cCCCCCcceecCCCCcceEEEEEeEEEEEEeCCCCCCCCcccCCCCCcccCCCchhhhhhhhhhhhhcCCCCcEEEEEcC
Q 042108 298 PAGSGSSFHMDPNSTSAWNAIIKGSKKWILFPPDVVPPGVHPSSDGAEVACPVSIMEWFMNFYGATKNWKKRPIECICKA 377 (406)
Q Consensus 298 ~~gs~t~~H~D~~~t~~~~~qi~G~K~w~L~pP~~~~~~l~p~~d~~~v~sp~~~~~w~~~~~p~~~~~~~~~~~~vl~p 377 (406)
++|+..+.|.++.. ....+|+|+=. . .... +.++.+
T Consensus 51 ~pG~~~p~H~H~g~--ee~~VL~G~f~--~---~~~~-------------------------------------~~~~~a 86 (165)
T 3cjx_A 51 APGLTLPLHFHTGT--VHMYTISGCWY--Y---TEYP-------------------------------------GQKQTA 86 (165)
T ss_dssp CTTCBCCEEEESSC--EEEEEEESEEE--E---TTCT-------------------------------------TSCEET
T ss_pred CCCCcCCcccCCCC--EEEEEEEEEEE--E---CCCc-------------------------------------eEEECC
Confidence 46778888888876 77888888622 1 0000 124678
Q ss_pred CCEEEeCCCCeeeeeecC----ccEEEe
Q 042108 378 GEVIFVPNGWWHLVINLE----ESIAIT 401 (406)
Q Consensus 378 GD~LfIP~gWwH~V~nl~----~sIavt 401 (406)
||.+++|.|=-|...+.+ +||.+.
T Consensus 87 Gd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 87 GCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 999999999999999987 665443
No 174
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=30.72 E-value=51 Score=29.67 Aligned_cols=23 Identities=4% Similarity=-0.029 Sum_probs=20.8
Q ss_pred EEEEcCCCEEEeCCCCeeeeeec
Q 042108 372 ECICKAGEVIFVPNGWWHLVINL 394 (406)
Q Consensus 372 ~~vl~pGD~LfIP~gWwH~V~nl 394 (406)
...+.|||+++||+|=.|.....
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEEE
T ss_pred eEEEcCCCEEEEcCCCceeeccc
Confidence 67899999999999999998766
No 175
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=29.56 E-value=41 Score=22.78 Aligned_cols=22 Identities=27% Similarity=0.465 Sum_probs=14.7
Q ss_pred EEEEcCCCEEEe-----CCCCeeeeee
Q 042108 372 ECICKAGEVIFV-----PNGWWHLVIN 393 (406)
Q Consensus 372 ~~vl~pGD~LfI-----P~gWwH~V~n 393 (406)
+-.++.||+|.| ..|||....+
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~W~~g~~~ 45 (60)
T 2x3w_D 19 ELSFKAGDELTKLGEEDEQGWCRGRLD 45 (60)
T ss_dssp BCCBCTTCEEEECSCCCSSSEEEEECS
T ss_pred cccCCCCCEEEEEEccCCCCceEEEeC
Confidence 445678999998 2377776543
No 176
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=26.21 E-value=57 Score=21.52 Aligned_cols=21 Identities=29% Similarity=0.398 Sum_probs=15.0
Q ss_pred EEEEcCCCEEEe-----CCCCeeeee
Q 042108 372 ECICKAGEVIFV-----PNGWWHLVI 392 (406)
Q Consensus 372 ~~vl~pGD~LfI-----P~gWwH~V~ 392 (406)
+-.++.||+|.| ..|||....
T Consensus 16 eLs~~~Gd~i~v~~~~~~~~W~~g~~ 41 (54)
T 2a28_A 16 EISIDPGDIITVIRGDDGSGWTYGEC 41 (54)
T ss_dssp BCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred CccCCCCCEEEEEEecCCCCEEEEEE
Confidence 334677888887 468988766
No 177
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.00 E-value=53 Score=23.06 Aligned_cols=22 Identities=18% Similarity=0.327 Sum_probs=14.4
Q ss_pred EEEEcCCCEEEe-----CCCCeeeeee
Q 042108 372 ECICKAGEVIFV-----PNGWWHLVIN 393 (406)
Q Consensus 372 ~~vl~pGD~LfI-----P~gWwH~V~n 393 (406)
+..+++||+|.| +.|||....+
T Consensus 23 eLs~~~Gd~i~vl~~~~~~gW~~~~~~ 49 (70)
T 2ct4_A 23 TISMAEGEDLSLMEEDKGDGWTRVRRK 49 (70)
T ss_dssp CCCBCTTCEEEEEECCSSSCEEEEECS
T ss_pred cCCCCCCCEEEEEeccCCCCeEEEEeC
Confidence 445678888888 3457765543
No 178
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=24.96 E-value=70 Score=29.07 Aligned_cols=26 Identities=15% Similarity=0.028 Sum_probs=21.3
Q ss_pred EEEEEcCCCEEEeCCCCeeeeeecCc
Q 042108 371 IECICKAGEVIFVPNGWWHLVINLEE 396 (406)
Q Consensus 371 ~~~vl~pGD~LfIP~gWwH~V~nl~~ 396 (406)
-..+++|||+++||.|.=|.....+.
T Consensus 83 ~~~~~~~Gd~~~ip~G~~~~w~~~~~ 108 (238)
T 3myx_A 83 DSVTLSTGESAVIGRGTQVRIDAQPE 108 (238)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECTT
T ss_pred eEEEEcCCCEEEECCCCEEEEEecCC
Confidence 46689999999999999777666654
No 179
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=24.51 E-value=63 Score=21.53 Aligned_cols=22 Identities=36% Similarity=0.659 Sum_probs=16.3
Q ss_pred EEEEcCCCEEEe----CCCCeeeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLVIN 393 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V~n 393 (406)
+..+++||+|.| ..|||.....
T Consensus 17 eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (58)
T 1zuy_A 17 ELPLKKGDVIYITREEPSGWSLGKLL 42 (58)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEEEES
T ss_pred cCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 345678888888 7889987655
No 180
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=22.52 E-value=64 Score=21.49 Aligned_cols=20 Identities=20% Similarity=0.694 Sum_probs=14.5
Q ss_pred EEEEcCCCEEEe----CCCCeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLV 391 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V 391 (406)
+-.+++||+|.| ..|||...
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~g~ 40 (57)
T 1cka_A 17 DLPFKKGDILRIRDKPEEQWWNAE 40 (57)
T ss_dssp BCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CCCCCCCCEEEEEEecCCCcEEEE
Confidence 344677888888 57898765
No 181
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=21.64 E-value=59 Score=22.60 Aligned_cols=20 Identities=40% Similarity=1.062 Sum_probs=15.0
Q ss_pred EEEEcCCCEEEe----CCCCeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLV 391 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V 391 (406)
+..+++||+|.| ..|||...
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~g~ 49 (68)
T 1s1n_A 26 DLTFKKGEILLVIEKKPDGWWIAK 49 (68)
T ss_dssp CCCBCSSEEEEECSCCSSSEEEEE
T ss_pred cCCCCCCCEEEEEEcCCCCeEEEE
Confidence 445678999988 45899776
No 182
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=21.59 E-value=73 Score=22.16 Aligned_cols=21 Identities=33% Similarity=0.665 Sum_probs=15.4
Q ss_pred EEEEcCCCEEEe----CCCCeeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLVI 392 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V~ 392 (406)
+-.++.||+|.| ..|||....
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (69)
T 4esr_A 22 ELTIHRGDIIRVFFKDNEDWWYGSI 46 (69)
T ss_dssp BCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred cCCCCCCCEEEEEEecCCCeEEEEe
Confidence 445677888887 688998754
No 183
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=21.41 E-value=73 Score=21.15 Aligned_cols=19 Identities=32% Similarity=0.691 Sum_probs=14.7
Q ss_pred EEEEcCCCEEEe----CCCCeee
Q 042108 372 ECICKAGEVIFV----PNGWWHL 390 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~ 390 (406)
+..+++||+|.| ..|||..
T Consensus 17 eLs~~~Gd~i~v~~~~~~~W~~g 39 (58)
T 4e6r_A 17 ELSLVXGSRVTVMEXCSDGWWRG 39 (58)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEE
T ss_pred EeeEeCCCEEEEeEcCCCCEEEE
Confidence 445677888888 6889987
No 184
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=21.27 E-value=69 Score=22.31 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=16.4
Q ss_pred EEEEcCCCEEEe----CCCCeeeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLVIN 393 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V~n 393 (406)
+-.++.||+|.| ..|||....+
T Consensus 24 eLs~~~Gd~i~v~~~~~~gWw~g~~~ 49 (67)
T 2eyx_A 24 ALALEVGELVKVTKINVSGQWEGECN 49 (67)
T ss_dssp BCCBCSSEEEEEEEECTTSEEEEEET
T ss_pred ccccCCCCEEEEEEecCCCEEEEEEC
Confidence 445678999988 6799988543
No 185
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=21.23 E-value=74 Score=21.21 Aligned_cols=21 Identities=29% Similarity=0.604 Sum_probs=15.2
Q ss_pred EEEEcCCCEEEe----CCCCeeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLVI 392 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V~ 392 (406)
+..++.||+|.| ..+||....
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 2vwf_A 18 ELGFRRGDFIHVMDNSDPNWWKGAC 42 (58)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 445677888888 578888765
No 186
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=21.10 E-value=60 Score=22.07 Aligned_cols=21 Identities=24% Similarity=0.484 Sum_probs=15.3
Q ss_pred EEEEcCCCEEEe----CCCCeeeee
Q 042108 372 ECICKAGEVIFV----PNGWWHLVI 392 (406)
Q Consensus 372 ~~vl~pGD~LfI----P~gWwH~V~ 392 (406)
+..+++||+|.| ..|||....
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (61)
T 1y0m_A 19 ELTFTKSAIIQNVEKQDGGWWRGDY 43 (61)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CcCCcCCCEEEEEEecCCCEEEEEE
Confidence 345677888887 678998754
No 187
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=20.62 E-value=77 Score=21.33 Aligned_cols=21 Identities=29% Similarity=0.733 Sum_probs=15.6
Q ss_pred EEEEcCCCEEEe------CCCCeeeee
Q 042108 372 ECICKAGEVIFV------PNGWWHLVI 392 (406)
Q Consensus 372 ~~vl~pGD~LfI------P~gWwH~V~ 392 (406)
+-.++.||+|.| ..|||....
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 45 (60)
T 1oot_A 19 DLPFRKGDVITILKKSDSQNDWWTGRV 45 (60)
T ss_dssp BCCBCTTCEEEEEECCSCTTSEEEEEE
T ss_pred EeeEcCCCEEEEEEeCCCCCCeEEEEE
Confidence 345677888888 578998765
Done!