BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042109
SATGFLVCDVAEAVSTSRRALRASKIPESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVR
L

High Scoring Gene Products

Symbol, full name Information P value
AT3G10060 protein from Arabidopsis thaliana 2.1e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042109
        (61 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100063 - symbol:AT3G10060 "AT3G10060" species...   175  2.1e-13   1


>TAIR|locus:2100063 [details] [associations]
            symbol:AT3G10060 "AT3G10060" species:3702 "Arabidopsis
            thaliana" [GO:0000413 "protein peptidyl-prolyl isomerization"
            evidence=IBA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
            activity" evidence=ISS;IBA] [GO:0005528 "FK506 binding"
            evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006457
            "protein folding" evidence=IEA] [GO:0018208 "peptidyl-proline
            modification" evidence=IBA] [GO:0009543 "chloroplast thylakoid
            lumen" evidence=ISS;IDA] [GO:0009579 "thylakoid" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0042631 "cellular response to water
            deprivation" evidence=RCA] InterPro:IPR001179 Pfam:PF00254
            PROSITE:PS50059 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0006457 GO:GO:0009535 GO:GO:0003755 GO:GO:0009543
            EMBL:AC010927 eggNOG:COG0545 HOGENOM:HOG000154887 GO:GO:0005528
            InterPro:IPR023566 PANTHER:PTHR10516 EMBL:AY094442 EMBL:AY122895
            IPI:IPI00546942 RefSeq:NP_187617.1 UniGene:At.23399
            UniGene:At.39997 HSSP:Q02790 ProteinModelPortal:Q9SR70 SMR:Q9SR70
            STRING:Q9SR70 PaxDb:Q9SR70 PRIDE:Q9SR70 ProMEX:Q9SR70
            EnsemblPlants:AT3G10060.1 GeneID:820167 KEGG:ath:AT3G10060
            TAIR:At3g10060 InParanoid:Q9SR70 OMA:KYYDIKV PhylomeDB:Q9SR70
            ProtClustDB:CLSN2915705 Genevestigator:Q9SR70 Uniprot:Q9SR70
        Length = 230

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 38/59 (64%), Positives = 42/59 (71%)

Query:     1 SATGFLVCDVAEAVSTSRRALRASKIPESEFTTLPNGLKYYDXXXXXXXXXXXXSRVAV 59
             +A+G L    AEAVSTSRRALRASK+PES+FTTLPNGLKYYD            SRVAV
Sbjct:    70 TASGILSTGSAEAVSTSRRALRASKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAV 128


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.129   0.355    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       61        49   0.00091  102 3  10 22  0.48    26
                                                     29  0.38    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  477 (51 KB)
  Total size of DFA:  83 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.10u 0.08s 8.18t   Elapsed:  00:00:01
  Total cpu time:  8.10u 0.08s 8.18t   Elapsed:  00:00:01
  Start:  Thu May  9 16:26:14 2013   End:  Thu May  9 16:26:15 2013

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