Query 042109
Match_columns 61
No_of_seqs 117 out of 646
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 04:31:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oe2_A Peptidyl-prolyl CIS-tra 99.0 2.3E-10 8E-15 78.7 2.6 44 18-61 99-142 (219)
2 1jvw_A Macrophage infectivity 98.9 2.9E-10 1E-14 74.8 2.3 46 16-61 17-63 (167)
3 1fd9_A Protein (macrophage inf 98.9 3.8E-10 1.3E-14 76.9 2.6 44 18-61 88-131 (213)
4 2jwx_A FKBP38NTD, FK506-bindin 98.8 2.1E-09 7.2E-14 70.2 3.3 44 18-61 16-70 (157)
5 1q6h_A FKBP-type peptidyl-prol 98.8 2.7E-09 9.3E-14 73.2 2.6 44 18-61 103-146 (224)
6 1u79_A FKBP-type peptidyl-prol 98.6 2.7E-08 9.3E-13 61.7 4.1 34 28-61 4-37 (129)
7 2y78_A Peptidyl-prolyl CIS-tra 98.5 9.5E-08 3.3E-12 60.1 4.1 37 25-61 17-53 (133)
8 1yat_A FK506 binding protein; 98.3 2.7E-07 9.3E-12 55.5 3.0 29 33-61 3-32 (113)
9 2f4e_A ATFKBP42; FKBP-like, al 98.3 2.9E-07 9.9E-12 60.6 3.1 35 27-61 40-74 (180)
10 3kz7_A FK506-binding protein 3 98.3 4.5E-07 1.5E-11 54.8 3.7 29 33-61 1-30 (119)
11 2vn1_A 70 kDa peptidylprolyl i 98.3 3.9E-07 1.3E-11 56.2 3.3 40 22-61 1-44 (129)
12 4dip_A Peptidyl-prolyl CIS-tra 98.3 8.6E-07 3E-11 54.2 4.3 34 28-61 4-39 (125)
13 2d9f_A FK506-binding protein 8 98.3 1.1E-06 3.8E-11 55.0 4.8 35 27-61 7-44 (135)
14 2lgo_A FKBP; infectious diseas 98.3 6.1E-07 2.1E-11 56.1 3.5 36 26-61 12-50 (130)
15 2awg_A 38 kDa FK-506 binding p 98.3 7.4E-07 2.5E-11 54.2 3.7 34 28-61 4-40 (118)
16 3uf8_A Ubiquitin-like protein 98.2 1.3E-06 4.4E-11 58.7 3.9 32 30-61 98-129 (209)
17 3b7x_A FK506-binding protein 6 98.2 9.7E-07 3.3E-11 55.1 2.7 34 28-61 18-51 (134)
18 2lkn_A AH receptor-interacting 98.1 1.2E-06 4.2E-11 57.9 2.2 30 32-61 6-37 (165)
19 1r9h_A FKB-6, FK506 binding pr 98.0 6.6E-06 2.3E-10 51.4 3.7 28 34-61 12-40 (135)
20 2ppn_A FK506-binding protein 1 97.9 6.2E-06 2.1E-10 48.8 3.2 25 37-61 1-26 (107)
21 2if4_A ATFKBP42; FKBP-like, al 97.9 5.2E-06 1.8E-10 56.4 3.1 33 29-61 42-74 (338)
22 3o5q_A Peptidyl-prolyl CIS-tra 97.7 2.5E-05 8.5E-10 48.1 3.7 29 33-61 16-45 (128)
23 1q1c_A FK506-binding protein 4 97.6 4.1E-05 1.4E-09 53.1 3.6 28 34-61 49-77 (280)
24 3jxv_A 70 kDa peptidyl-prolyl 97.6 8.2E-06 2.8E-10 57.6 0.0 33 29-61 4-37 (356)
25 3o5e_A Peptidyl-prolyl CIS-tra 97.6 5.4E-05 1.8E-09 47.7 3.7 28 34-61 33-61 (144)
26 1kt0_A FKBP51, 51 kDa FK506-bi 97.5 3.6E-05 1.2E-09 54.3 1.7 28 34-61 29-57 (457)
27 1p5q_A FKBP52, FK506-binding p 97.3 0.00019 6.3E-09 48.5 3.7 32 30-61 19-51 (336)
28 1q1c_A FK506-binding protein 4 96.2 0.0034 1.2E-07 43.4 3.4 28 34-61 166-194 (280)
29 3jxv_A 70 kDa peptidyl-prolyl 96.1 0.0046 1.6E-07 43.5 3.7 28 34-61 242-270 (356)
30 1kt0_A FKBP51, 51 kDa FK506-bi 90.0 0.29 1E-05 34.3 3.7 28 34-61 144-172 (457)
31 1hxv_A Trigger factor; FKBP fo 69.2 1.5 5.3E-05 26.2 0.9 14 48-61 27-40 (113)
32 3r8s_P 50S ribosomal protein L 44.8 9.8 0.00033 23.9 1.5 13 49-61 17-29 (114)
33 3v2d_T 50S ribosomal protein L 39.5 13 0.00044 24.4 1.5 13 49-61 20-32 (146)
34 3od9_A Putative exported prote 37.8 22 0.00076 23.1 2.4 25 32-57 9-33 (135)
35 2zjr_M 50S ribosomal protein L 37.2 15 0.0005 24.5 1.6 13 49-61 25-37 (166)
36 4dt4_A FKBP-type 16 kDa peptid 31.3 20 0.00069 23.1 1.4 12 50-61 24-35 (169)
No 1
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=98.95 E-value=2.3e-10 Score=78.73 Aligned_cols=44 Identities=25% Similarity=0.448 Sum_probs=42.5
Q ss_pred HHHHhhCCCCCCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 18 RRALRASKIPESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 18 ~~a~~~~~~~~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
-.+|+++|..+++++++||||+|++|++|+|+.|..||+|.|||
T Consensus 99 ~~~fl~~n~~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y 142 (219)
T 3oe2_A 99 ERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRY 142 (219)
T ss_dssp HHHHHHHHHTSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEE
T ss_pred HHHHHHHhccCCCcEECCCCeEEEEEecCCCccCCCCCEEEEEE
Confidence 47899999999999999999999999999999999999999998
No 2
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=98.93 E-value=2.9e-10 Score=74.78 Aligned_cols=46 Identities=20% Similarity=0.352 Sum_probs=42.9
Q ss_pred ccHHHHhhCCCCCCCcccCCCCCeEEEeEcccCCC-cCCCCeEEEeC
Q 042109 16 TSRRALRASKIPESEFTTLPNGLKYYDVKVGGGPV-AKKGSRVAVRL 61 (61)
Q Consensus 16 ~~~~a~~~~~~~~~~~v~~pSGLqy~dl~~G~G~~-p~~G~tV~VhY 61 (61)
....+|+++|..+++++++||||+|++|+.|+|+. |+.||.|.|||
T Consensus 17 ~~~~~~l~~~~~~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y 63 (167)
T 1jvw_A 17 RVGRLFMEQKAAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHY 63 (167)
T ss_dssp HHHHHHHHHHHHSTTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEE
T ss_pred HHHHHHHHhcccCCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEE
Confidence 44578999999999999999999999999999999 99999999998
No 3
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=98.92 E-value=3.8e-10 Score=76.86 Aligned_cols=44 Identities=25% Similarity=0.398 Sum_probs=41.8
Q ss_pred HHHHhhCCCCCCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 18 RRALRASKIPESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 18 ~~a~~~~~~~~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
..+|+.+|..+++++++||||+|++|++|+|+.|+.||+|.|||
T Consensus 88 ~~~~l~~~~~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y 131 (213)
T 1fd9_A 88 GEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEY 131 (213)
T ss_dssp HHHHHHHHHHSTTEEECTTSCEEEEEECCCSCCCCTTCEEEEEE
T ss_pred HHHHHHHhcccCCcEECCCccEEEEEecCCCccCCCCCEEEEEE
Confidence 46799999999999999999999999999999999999999998
No 4
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=98.82 E-value=2.1e-09 Score=70.18 Aligned_cols=44 Identities=32% Similarity=0.328 Sum_probs=41.3
Q ss_pred HHHHhhCCCCCCCcc--------cCCCCC-eEEEeEcccCC--CcCCCCeEEEeC
Q 042109 18 RRALRASKIPESEFT--------TLPNGL-KYYDVKVGGGP--VAKKGSRVAVRL 61 (61)
Q Consensus 18 ~~a~~~~~~~~~~~v--------~~pSGL-qy~dl~~G~G~--~p~~G~tV~VhY 61 (61)
-.+|+++|..++++. +++||+ +|++|++|+|+ .|+.||+|.|||
T Consensus 16 ~~~fl~~~~~~~gv~~~~~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y 70 (157)
T 2jwx_A 16 AREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHL 70 (157)
T ss_dssp SCSSCSCCSSCCCCCCCCCSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEE
T ss_pred HHHHHHHhccCCCccccccccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEE
Confidence 367999999999999 999998 89999999998 999999999998
No 5
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=98.76 E-value=2.7e-09 Score=73.20 Aligned_cols=44 Identities=27% Similarity=0.354 Sum_probs=41.5
Q ss_pred HHHHhhCCCCCCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 18 RRALRASKIPESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 18 ~~a~~~~~~~~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
..+|++++..++++.+++|||+|++|++|+|..|+.||+|.|||
T Consensus 103 ~~~fl~~~~~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y 146 (224)
T 1q6h_A 103 GKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNY 146 (224)
T ss_dssp HHHHHHHHHHSTTEEECTTSCEEEEEECCSSCCCCTTCEEEEEE
T ss_pred HHHHHHHhCcCCCeEECCCceEEEEEecccCccccCCCEEEEEE
Confidence 46788898899999999999999999999999999999999998
No 6
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=98.64 E-value=2.7e-08 Score=61.69 Aligned_cols=34 Identities=38% Similarity=0.639 Sum_probs=31.6
Q ss_pred CCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 28 ESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 28 ~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
..+++++||||+|++|++|+|..|+.||.|.|||
T Consensus 4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y 37 (129)
T 1u79_A 4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHY 37 (129)
T ss_dssp -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEE
T ss_pred CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEE
Confidence 4678899999999999999999999999999998
No 7
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=98.51 E-value=9.5e-08 Score=60.08 Aligned_cols=37 Identities=32% Similarity=0.493 Sum_probs=34.0
Q ss_pred CCCCCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 25 KIPESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 25 ~~~~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
+..++++.++|+||+|++|++|+|..|+.||.|.|||
T Consensus 17 ~~~~~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y 53 (133)
T 2y78_A 17 RGSHMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHY 53 (133)
T ss_dssp GTTTTCCEECTTSCEEEEEECCSSCBCCTTSEEEEEE
T ss_pred cccCCCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEE
Confidence 3456778999999999999999999999999999998
No 8
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=98.34 E-value=2.7e-07 Score=55.49 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=27.8
Q ss_pred cCCCCCeEEEeEcccCCC-cCCCCeEEEeC
Q 042109 33 TLPNGLKYYDVKVGGGPV-AKKGSRVAVRL 61 (61)
Q Consensus 33 ~~pSGLqy~dl~~G~G~~-p~~G~tV~VhY 61 (61)
+++|||+|+++++|+|+. |+.||.|.+||
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y 32 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHY 32 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEE
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEE
Confidence 579999999999999999 99999999998
No 9
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=98.32 E-value=2.9e-07 Score=60.60 Aligned_cols=35 Identities=23% Similarity=0.176 Sum_probs=32.5
Q ss_pred CCCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 27 PESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 27 ~~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
..+++.++++||+|++|+.|+|..|+.||.|.|||
T Consensus 40 ~~~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y 74 (180)
T 2f4e_A 40 VDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHY 74 (180)
T ss_dssp CCSCCEEEETTEEEEEEECCBSCCBCTTCEEEEEE
T ss_pred cCCCcEECCCceEEEEEeCCCCCCCCCCCEEEEEE
Confidence 44678899999999999999999999999999998
No 10
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=98.32 E-value=4.5e-07 Score=54.82 Aligned_cols=29 Identities=24% Similarity=0.178 Sum_probs=27.0
Q ss_pred cCCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 33 TLPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 33 ~~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
++||||+|++|++|+|. .|+.||.|.|||
T Consensus 1 ~~p~g~~~~il~~G~g~~~p~~gd~V~v~Y 30 (119)
T 3kz7_A 1 EGPPKYTKSILKKGDKTNFPKKGDVVHCWY 30 (119)
T ss_dssp CCSCSEEEEEEECCCSSCCCCTTCEEEEEE
T ss_pred CCCCccEEEEEEcCCCCCcCCCCCEEEEEE
Confidence 47999999999999996 599999999998
No 11
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=98.31 E-value=3.9e-07 Score=56.17 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=30.4
Q ss_pred hhCCCCCCCcccCCCCCeEE-EeEcc---cCCCcCCCCeEEEeC
Q 042109 22 RASKIPESEFTTLPNGLKYY-DVKVG---GGPVAKKGSRVAVRL 61 (61)
Q Consensus 22 ~~~~~~~~~~v~~pSGLqy~-dl~~G---~G~~p~~G~tV~VhY 61 (61)
|++|.+++++.+++||++|+ +|+.| +|..|+.||.|.|||
T Consensus 1 ~~~~~~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y 44 (129)
T 2vn1_A 1 MTTEQEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHY 44 (129)
T ss_dssp ------CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEE
T ss_pred CCcccccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEE
Confidence 45677889999999999986 77854 679999999999998
No 12
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=98.28 E-value=8.6e-07 Score=54.21 Aligned_cols=34 Identities=12% Similarity=-0.087 Sum_probs=31.2
Q ss_pred CCCcccCCCCCeEEEeEccc--CCCcCCCCeEEEeC
Q 042109 28 ESEFTTLPNGLKYYDVKVGG--GPVAKKGSRVAVRL 61 (61)
Q Consensus 28 ~~~~v~~pSGLqy~dl~~G~--G~~p~~G~tV~VhY 61 (61)
+.++.++++||+|++|++|+ |..++.||.|.|||
T Consensus 4 ~~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y 39 (125)
T 4dip_A 4 SMGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHY 39 (125)
T ss_dssp -CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEE
T ss_pred cCceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEE
Confidence 46778899999999999999 89999999999998
No 13
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=1.1e-06 Score=54.96 Aligned_cols=35 Identities=31% Similarity=0.300 Sum_probs=32.4
Q ss_pred CCCCcccCCCC-CeEEEeEcccCC--CcCCCCeEEEeC
Q 042109 27 PESEFTTLPNG-LKYYDVKVGGGP--VAKKGSRVAVRL 61 (61)
Q Consensus 27 ~~~~~v~~pSG-Lqy~dl~~G~G~--~p~~G~tV~VhY 61 (61)
..+.+..++|| |+|++|++|+|+ .|+.||+|.|||
T Consensus 7 ~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y 44 (135)
T 2d9f_A 7 GEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHL 44 (135)
T ss_dssp CSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEE
T ss_pred cccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEE
Confidence 56778889999 999999999998 899999999998
No 14
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=98.27 E-value=6.1e-07 Score=56.05 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=32.9
Q ss_pred CCCCCcccCCCCCeEE--EeEcccCCC-cCCCCeEEEeC
Q 042109 26 IPESEFTTLPNGLKYY--DVKVGGGPV-AKKGSRVAVRL 61 (61)
Q Consensus 26 ~~~~~~v~~pSGLqy~--dl~~G~G~~-p~~G~tV~VhY 61 (61)
.....+.+++|||+|+ +|++|+|+. |+.||.|.|||
T Consensus 12 ~~~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y 50 (130)
T 2lgo_A 12 LEAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHY 50 (130)
T ss_dssp SCCSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEE
T ss_pred cccccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEE
Confidence 3566778899999999 999999999 99999999998
No 15
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=98.26 E-value=7.4e-07 Score=54.18 Aligned_cols=34 Identities=32% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCCcccCCCC-CeEEEeEcccCC--CcCCCCeEEEeC
Q 042109 28 ESEFTTLPNG-LKYYDVKVGGGP--VAKKGSRVAVRL 61 (61)
Q Consensus 28 ~~~~v~~pSG-Lqy~dl~~G~G~--~p~~G~tV~VhY 61 (61)
.+.+..++|| |+|++|++|+|+ .|+.||.|.+||
T Consensus 4 ~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y 40 (118)
T 2awg_A 4 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHL 40 (118)
T ss_dssp TCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEE
T ss_pred ccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEE
Confidence 4567788999 999999999998 899999999998
No 16
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=98.18 E-value=1.3e-06 Score=58.71 Aligned_cols=32 Identities=38% Similarity=0.594 Sum_probs=30.5
Q ss_pred CcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 30 EFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 30 ~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
.++++||||+|+++++|+|..|+.||.|.|||
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y 129 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHY 129 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCBCCTTCEEEEEE
T ss_pred cccCCCCceEEEEEEcCCCCcCCCCCEEEEEE
Confidence 37889999999999999999999999999998
No 17
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=98.16 E-value=9.7e-07 Score=55.14 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=30.6
Q ss_pred CCCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 28 ESEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 28 ~~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
+...+++++||+|++|++|+|..+..||.|.|||
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y 51 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAGDLVAPDASVLVKY 51 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEEEECCTTCEEEEEE
T ss_pred ccceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEE
Confidence 3445678999999999999999999999999998
No 18
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.08 E-value=1.2e-06 Score=57.91 Aligned_cols=30 Identities=13% Similarity=0.366 Sum_probs=26.6
Q ss_pred ccCCCCCeEEEeEcccCCCc--CCCCeEEEeC
Q 042109 32 TTLPNGLKYYDVKVGGGPVA--KKGSRVAVRL 61 (61)
Q Consensus 32 v~~pSGLqy~dl~~G~G~~p--~~G~tV~VhY 61 (61)
.+++|||+|++|++|+|+.| .+|++|.|||
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY 37 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHY 37 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEEC
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEE
Confidence 35689999999999999865 5899999999
No 19
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=97.96 E-value=6.6e-06 Score=51.38 Aligned_cols=28 Identities=25% Similarity=0.260 Sum_probs=26.7
Q ss_pred CCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
+++||+|+++++|+|. .|+.||.|.|||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y 40 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHY 40 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEE
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEE
Confidence 7999999999999997 699999999998
No 20
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=97.95 E-value=6.2e-06 Score=48.82 Aligned_cols=25 Identities=24% Similarity=0.492 Sum_probs=24.1
Q ss_pred CCeEEEeEcccCCC-cCCCCeEEEeC
Q 042109 37 GLKYYDVKVGGGPV-AKKGSRVAVRL 61 (61)
Q Consensus 37 GLqy~dl~~G~G~~-p~~G~tV~VhY 61 (61)
||+|+++++|+|+. |+.||.|.+||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y 26 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHY 26 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEE
Confidence 79999999999998 99999999998
No 21
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.94 E-value=5.2e-06 Score=56.38 Aligned_cols=33 Identities=24% Similarity=0.178 Sum_probs=30.6
Q ss_pred CCcccCCCCCeEEEeEcccCCCcCCCCeEEEeC
Q 042109 29 SEFTTLPNGLKYYDVKVGGGPVAKKGSRVAVRL 61 (61)
Q Consensus 29 ~~~v~~pSGLqy~dl~~G~G~~p~~G~tV~VhY 61 (61)
.++.++++||+|++|++|+|..|..||+|.|||
T Consensus 42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y 74 (338)
T 2if4_A 42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHY 74 (338)
T ss_dssp SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEE
T ss_pred cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEE
Confidence 456788999999999999999999999999998
No 22
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=97.75 E-value=2.5e-05 Score=48.11 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=26.7
Q ss_pred cCCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 33 TLPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 33 ~~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
..++||+|+++++|+|. .|+.||.|.|||
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y 45 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHY 45 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEE
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEE
Confidence 35899999999999998 699999999998
No 23
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=97.62 E-value=4.1e-05 Score=53.14 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCCCCeEEEeEcccCCC-cCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGGPV-AKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G~~-p~~G~tV~VhY 61 (61)
+++||+|++|++|+|.. |+.||.|.|||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y 77 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHY 77 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEE
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEE
Confidence 68999999999999998 99999999998
No 24
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=97.61 E-value=8.2e-06 Score=57.57 Aligned_cols=33 Identities=30% Similarity=0.313 Sum_probs=0.0
Q ss_pred CCcccCCCCCeEEEeEcccC-CCcCCCCeEEEeC
Q 042109 29 SEFTTLPNGLKYYDVKVGGG-PVAKKGSRVAVRL 61 (61)
Q Consensus 29 ~~~v~~pSGLqy~dl~~G~G-~~p~~G~tV~VhY 61 (61)
++...++|||+|+++++|+| +.|+.||.|.+||
T Consensus 4 ~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y 37 (356)
T 3jxv_A 4 EENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHY 37 (356)
T ss_dssp ----------------------------------
T ss_pred ccceECCCCeEEEEEEeecCCccCCCCCEEEEEE
Confidence 44567899999999999999 6899999999999
No 25
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=97.60 E-value=5.4e-05 Score=47.72 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=26.5
Q ss_pred CCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
.++||.|+++++|+|. .|..||.|.|||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y 61 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHY 61 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEE
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEE
Confidence 5899999999999998 799999999998
No 26
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.47 E-value=3.6e-05 Score=54.35 Aligned_cols=28 Identities=25% Similarity=0.305 Sum_probs=15.8
Q ss_pred CCCCCeEEEeEcccCCC-cCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGGPV-AKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G~~-p~~G~tV~VhY 61 (61)
+++||+|++|++|+|.. |..||.|.|||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y 57 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHY 57 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEE
Confidence 68999999999999998 99999999998
No 27
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.31 E-value=0.00019 Score=48.54 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=27.4
Q ss_pred CcccCCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 30 EFTTLPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 30 ~~v~~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
..++.++||++++|+.|+|. .|..|++|.|||
T Consensus 19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y 51 (336)
T 1p5q_A 19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVAL 51 (336)
T ss_dssp ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEE
T ss_pred eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEE
Confidence 34567899999999999998 799999999998
No 28
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=96.24 E-value=0.0034 Score=43.39 Aligned_cols=28 Identities=25% Similarity=0.226 Sum_probs=25.9
Q ss_pred CCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
..+||+|++++.|+|. .|+.||+|.+||
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y 194 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVAL 194 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEE
T ss_pred cccceeEEeeecccccccccCCceEEEEE
Confidence 5689999999999998 589999999998
No 29
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=96.14 E-value=0.0046 Score=43.47 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=26.1
Q ss_pred CCCCCeEEEeEcccC-CCcCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGG-PVAKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G-~~p~~G~tV~VhY 61 (61)
..+|++|+.++.|+| ..|+.||+|.|||
T Consensus 242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y 270 (356)
T 3jxv_A 242 DDKKILKKVLKEXEGYERPNEGAVVTVKI 270 (356)
T ss_dssp TTCCEEEEEEECCBSSCCCCTTCEEEEEE
T ss_pred cccceeEEeeecccccCCCCCCCEEEEEE
Confidence 467999999999999 7999999999998
No 30
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=90.04 E-value=0.29 Score=34.26 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=24.0
Q ss_pred CCCCCeEEEeEcccCC-CcCCCCeEEEeC
Q 042109 34 LPNGLKYYDVKVGGGP-VAKKGSRVAVRL 61 (61)
Q Consensus 34 ~pSGLqy~dl~~G~G~-~p~~G~tV~VhY 61 (61)
...++..+.++.|.|. .|..|++|.|||
T Consensus 144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y 172 (457)
T 1kt0_A 144 EDGGIIRRTKRKGEGYSNPNEGATVEIHL 172 (457)
T ss_dssp SSSSEEEEEEECCBCSCCCCTTCEEEEEE
T ss_pred CCcceEEEEEecCCCCCCCCCCCEEEEEE
Confidence 3457888889999885 799999999998
No 31
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=69.23 E-value=1.5 Score=26.25 Aligned_cols=14 Identities=7% Similarity=0.140 Sum_probs=10.9
Q ss_pred CCCcCCCCeEEEeC
Q 042109 48 GPVAKKGSRVAVRL 61 (61)
Q Consensus 48 G~~p~~G~tV~VhY 61 (61)
+..+++||.|.|||
T Consensus 27 ~~~~~~gD~V~v~Y 40 (113)
T 1hxv_A 27 DKKLANGDIAIIDF 40 (113)
T ss_dssp --CCCSSEEEEEEE
T ss_pred CCCCCCCCEEEEEE
Confidence 55789999999998
No 32
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=44.84 E-value=9.8 Score=23.91 Aligned_cols=13 Identities=31% Similarity=0.631 Sum_probs=11.4
Q ss_pred CCcCCCCeEEEeC
Q 042109 49 PVAKKGSRVAVRL 61 (61)
Q Consensus 49 ~~p~~G~tV~VhY 61 (61)
|...+||+|.|||
T Consensus 17 P~f~~GDtv~V~~ 29 (114)
T 3r8s_P 17 PSFRPGDTVEVKV 29 (114)
T ss_dssp CCCCTTCEEEEEE
T ss_pred CccCCCCEEEEEE
Confidence 6778999999996
No 33
>3v2d_T 50S ribosomal protein L19; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 2wrj_T 2wrl_T 2wro_T 2wrr_T 2x9s_T 2x9u_T ...
Probab=39.54 E-value=13 Score=24.38 Aligned_cols=13 Identities=31% Similarity=0.473 Sum_probs=11.5
Q ss_pred CCcCCCCeEEEeC
Q 042109 49 PVAKKGSRVAVRL 61 (61)
Q Consensus 49 ~~p~~G~tV~VhY 61 (61)
|...+||+|.|||
T Consensus 20 P~F~~GDtV~V~~ 32 (146)
T 3v2d_T 20 PEFRPGDTVRVSY 32 (146)
T ss_dssp CCCCTTCEEEEEE
T ss_pred CCcCCCCEEEEEE
Confidence 6778999999997
No 34
>3od9_A Putative exported protein; beta sandwich, C-terminal helix, hydrolase inhibitor; 1.41A {Aeromonas hydrophila}
Probab=37.80 E-value=22 Score=23.09 Aligned_cols=25 Identities=40% Similarity=0.505 Sum_probs=21.8
Q ss_pred ccCCCCCeEEEeEcccCCCcCCCCeE
Q 042109 32 TTLPNGLKYYDVKVGGGPVAKKGSRV 57 (61)
Q Consensus 32 v~~pSGLqy~dl~~G~G~~p~~G~tV 57 (61)
.++|+| +..++.+|.++....|+-.
T Consensus 9 i~Lp~g-~~~VvseG~lEP~SiGSYs 33 (135)
T 3od9_A 9 LTLPSG-QVVTVSEGRGEPASTGSYD 33 (135)
T ss_dssp EECTTS-CEEEEEECTTCCSSSEEEE
T ss_pred ccCCCC-cEEEEecCCCCccccccEE
Confidence 578999 9999999999999988743
No 35
>2zjr_M 50S ribosomal protein L19; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.6 PDB: 1nwx_N* 1nwy_N* 1sm1_N* 1xbp_N* 2zjp_M* 2zjq_M 1nkw_N 3cf5_M* 3dll_M* 3pio_M* 3pip_M* 1pnu_N 1pny_N 1vor_Q 1vou_Q 1vow_Q 1voy_Q 1vp0_Q
Probab=37.19 E-value=15 Score=24.54 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=11.6
Q ss_pred CCcCCCCeEEEeC
Q 042109 49 PVAKKGSRVAVRL 61 (61)
Q Consensus 49 ~~p~~G~tV~VhY 61 (61)
|...+||+|.|||
T Consensus 25 P~Fr~GDtV~V~v 37 (166)
T 2zjr_M 25 PDFRPGDTVRVDT 37 (166)
T ss_dssp CCCSSSEEEEEEC
T ss_pred CCcCCCCEEEEEE
Confidence 6788999999997
No 36
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=31.31 E-value=20 Score=23.10 Aligned_cols=12 Identities=25% Similarity=0.304 Sum_probs=11.1
Q ss_pred CcCCCCeEEEeC
Q 042109 50 VAKKGSRVAVRL 61 (61)
Q Consensus 50 ~p~~G~tV~VhY 61 (61)
.+++|+.|.+||
T Consensus 24 ~i~~gd~V~v~Y 35 (169)
T 4dt4_A 24 SVQSNSAVLVHF 35 (169)
T ss_dssp SCCTTCEEEEEE
T ss_pred cCCCCCEEEEEE
Confidence 689999999998
Done!